Citrus Sinensis ID: 029125

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------20
Protein Sequence
MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGG
Secondary Structure (PSIPRED)
cHHHHHHHHHccccccccccEEEccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEccccccccccccccEEEEEEccccHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHccccccccccEEEEcccccccccccccccccccEEEccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEcccccccccHHHccEEEEEcccccHHHHHHHHccccEEEEEcccccccccEEEcccHHHHHHHHHHHHccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
MRTIVSRLINSRSSVSRLSAITasgngrylstdsnkvdeplkveeaetvnvppppsekllvlggngfvgsHICREALDRGLTVASLSrsgrsslrdswANNVIWhqgnllssdsWKEALDGVTAVISCvggfgsnsymYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGG
Flexible Loop (DISEMBL)
MRTIVSRlinsrssvsrlsaitasgngrylstdsnkvdeplkveeaetvnvppppsEKLLVLGGNGFVGSHICREALDRGLTVASLSRsgrsslrdswANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGG
Low Complexity Region (SEG)
MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVAslsrsgrsslrdsWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGG
Disordered region (IsUnstruct)
**********************************************************LLVLGGNGFVGSHICREALDRGLTVASL*******LRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT******
Disordered Region (DISOPRED)
*********************************************************KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPY**
Disordered Region (DISEMBL)
MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGG
Disordered Region (DISPRO)
***********RSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPY**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	198	2.2.26 [Sep-21-2011]
Q9FVR6	296	Uncharacterized protein A	no	no	0.717	0.479	0.486	6e-35
Q05892	277	Uncharacterized protein Y	yes	no	0.368	0.263	0.410	2e-10
Q3ZBE9	356	Sterol-4-alpha-carboxylat	yes	no	0.545	0.303	0.305	4e-07
O78472	314	Uncharacterized protein y	yes	no	0.545	0.343	0.321	7e-07
P51238	319	Uncharacterized protein y	N/A	no	0.530	0.329	0.339	7e-07
Q5PPL3	362	Sterol-4-alpha-carboxylat	yes	no	0.530	0.290	0.307	1e-06
Q1XDP9	319	Uncharacterized protein y	N/A	no	0.530	0.329	0.339	1e-06
O74482	276	Uncharacterized protein C	yes	no	0.404	0.289	0.349	2e-06
O53454	370	3 beta-hydroxysteroid deh	yes	no	0.525	0.281	0.322	2e-06
O35048	338	3 beta-hydroxysteroid deh	no	no	0.717	0.420	0.282	5e-06

>sp|Q9FVR6|Y1222_ARATH Uncharacterized protein At1g32220, chloroplastic OS=Arabidopsis thaliana GN=At1g32220 PE=1 SV=1

 Score =  147 bits (370), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 70/144 (48%), Positives = 98/144 (68%), Gaps = 2/144 (1%)

Query: 56  SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSW 115
           SE+++VLGGNGFVGS IC+ A+  G+ V S+SRSGR +  DSW + V W  G++   + W
Sbjct: 62  SERVVVLGGNGFVGSAICKAAISNGIEVVSVSRSGRPNFEDSWLDQVTWVTGDVFYLN-W 120

Query: 116 KEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYL 175
            E L G TAV+S +GGFG+   M +ING AN+ A+ AA + GV +FV I+  D+ +  ++
Sbjct: 121 DEVLLGATAVVSTIGGFGNEEQMKRINGEANVTAVNAAKDFGVPKFVLITVHDYNLPPFI 180

Query: 176 L-QGYYEGKRAAETELLTRYPYGG 198
           L  GY+ GKR AE ELL++YP  G
Sbjct: 181 LSNGYFTGKRNAEAELLSKYPTSG 204

Arabidopsis thaliana (taxid: 3702)

>sp|Q05892|YL290_YEAST Uncharacterized protein YLR290C, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR290C PE=1 SV=1

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 5/78 (6%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS----SLRD-SWANNVIWHQGNLLSS 112
           KL+V GGNGF+G  IC+EA+  G  V S+SRSG++     L D  W   V W   ++   
Sbjct: 4   KLIVFGGNGFLGKRICQEAVTSGYQVVSVSRSGKAPHSNELNDKQWMQEVQWTAADIFKP 63

Query: 113 DSWKEALDGVTAVISCVG 130
           DS+ E L+  T V+  +G
Sbjct: 64  DSYHELLNNATNVVHSLG 81

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q3ZBE9|NSDHL_BOVIN Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Bos taurus GN=NSDHL PE=2 SV=1

 Score = 54.7 bits (130), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 10/118 (8%)

Query: 54  PPSEKLLVLGGNGFVGSHICREALDRGLTVASLS-RSGRSSLRDSWANNVIWHQGNLLSS 112
           P +++  V+GG GF+G H+  + L RG  V     R G  + R      V +  G+L S 
Sbjct: 18  PKAKRCTVIGGCGFLGQHMVEQLLARGYAVNVFDIRQGFDNPR------VQFFLGDLCSQ 71

Query: 113 DSWKEALDGVTAVISCVG--GFGSNSYM-YKINGTANINAIRAASEKGVKRFVYISAA 167
                AL GV+ V  C     F +N  + Y++N     N I    E GV++ +  S+A
Sbjct: 72  QDLYPALKGVSTVFHCASPPPFNNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSA 129

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 0

>sp|O78472|YCF39_GUITH Uncharacterized protein ycf39 OS=Guillardia theta GN=ycf39 PE=3 SV=1

 Score = 53.9 bits (128), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 4/112 (3%)

Query: 59  LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS-LRDSWANNVIWHQGNLLSSDSWKE 117
           LLV+G  G +G  I R ALD G  V+ L R+ R +     W   +++  G+L   ++   
Sbjct: 3   LLVIGATGTLGRQIVRRALDEGYEVSCLVRNLRKAYFLKEWGAELLY--GDLSLPETLPT 60

Query: 118 ALDGVTAVISCVGGFGSNSY-MYKINGTANINAIRAASEKGVKRFVYISAAD 168
            L  +TA+I       S+ Y   KI+    I  + AA   G+KRFV+ S  +
Sbjct: 61  NLTKITAIIDASTARPSDPYKAEKIDLEGKIALVEAAKVAGIKRFVFFSVLN 112

Guillardia theta (taxid: 55529)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P51238|YCF39_PORPU Uncharacterized protein ycf39 OS=Porphyra purpurea GN=ycf39 PE=3 SV=1

 Score = 53.9 bits (128), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 4/109 (3%)

Query: 59  LLVLGGNGFVGSHICREALDRGLTVASLSRSGR-SSLRDSWANNVIWHQGNLLSSDSWKE 117
           LLV+G  G +G  I R ALD G  V  + R+ R S+    W   +++  G+L   +S  +
Sbjct: 3   LLVIGATGTLGRQIVRRALDEGYNVKCMVRNLRKSAFLKEWGAELVY--GDLKLPESILQ 60

Query: 118 ALDGVTAVISCVGGFGSNSY-MYKINGTANINAIRAASEKGVKRFVYIS 165
           +  GVTAVI       S+ Y   +I+    I  I AA    V+RF++ S
Sbjct: 61  SFCGVTAVIDASTSRPSDPYNTEQIDLDGKIALIEAAKAAKVQRFIFFS 109

Porphyra purpurea (taxid: 2787)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q5PPL3|NSDHL_RAT Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Rattus norvegicus GN=Nsdhl PE=2 SV=1

 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 12/117 (10%)

Query: 56  SEKLLVLGGNGFVGSHICREALDRGLTVASLS-RSGRSSLRDSWANNVIWHQGNLLSSDS 114
           ++K  V+GG+GF+G H+  + L RG  V     R G  + R      V +  G+L +   
Sbjct: 26  AKKCTVIGGSGFLGQHMVEQLLSRGYAVNVFDVRQGFDNPR------VQFFIGDLCNQQD 79

Query: 115 WKEALDGVTAVISCVGGFGSNS----YMYKINGTANINAIRAASEKGVKRFVYISAA 167
              AL GV+ V  C     SNS      Y++N T     I    E GV++ +  S+A
Sbjct: 80  LYPALKGVSTVFHCASP-PSNSNNKELFYRVNSTGTKTVIETCKEAGVQKLILTSSA 135

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 0

>sp|Q1XDP9|YCF39_PORYE Uncharacterized protein ycf39 OS=Porphyra yezoensis GN=ycf39 PE=3 SV=1

 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 4/109 (3%)

Query: 59  LLVLGGNGFVGSHICREALDRGLTVASLSRSGR-SSLRDSWANNVIWHQGNLLSSDSWKE 117
           LLV+G  G +G  I R ALD G  V  + R+ R S+    W   +I+  G+L   +S  +
Sbjct: 3   LLVIGATGTLGRQIVRRALDEGYNVKCMVRNLRKSAFLKEWGAELIY--GDLKLPESILQ 60

Query: 118 ALDGVTAVISCVGGFGSNSY-MYKINGTANINAIRAASEKGVKRFVYIS 165
           +  GVTA+I        + Y   KI+    I  I AA    V+RF++ S
Sbjct: 61  SFCGVTAIIDASTSRLPDPYNAEKIDLDGKIALIEAAKAAKVERFIFFS 109

Porphyra yezoensis (taxid: 2788)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|O74482|YQJ9_SCHPO Uncharacterized protein C1840.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1840.09 PE=3 SV=1

 Score = 52.4 bits (124), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 3/83 (3%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSS-DS 114
           K++VLGG+GF+G +IC+ A+ +G  V S+SR G   L  ++ W ++V W   +     +S
Sbjct: 2   KIVVLGGSGFLGHNICKLAIAKGYEVVSVSRRGAGGLHNKEPWMDDVEWETLDAQKDPNS 61

Query: 115 WKEALDGVTAVISCVGGFGSNSY 137
               L   +AV++ VG    N+Y
Sbjct: 62  LLPVLRDASAVVNSVGILMENNY 84

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|O53454|3BHS_MYCTU 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Mycobacterium tuberculosis GN=Rv1106c PE=1 SV=1

 Score = 52.4 bits (124), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 17/121 (14%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           ++LV GG GFVG+++    LDRG  V S  R+   SL  +     +  QG++  +D    
Sbjct: 16  RVLVTGGAGFVGANLVTTLLDRGHWVRSFDRA--PSLLPAHPQLEVL-QGDITDADVCAA 72

Query: 118 ALDGV------TAVISCVGG------FGSNSYMYKINGTANINAIRAASEKGVKRFVYIS 165
           A+DG+       A+I  +GG      +   S+   + GT N+  + A    GV+RFVY S
Sbjct: 73  AVDGIDTIFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENL--LHAGQRAGVQRFVYTS 130

Query: 166 A 166
           +
Sbjct: 131 S 131

3-beta-HSD is a bifunctional enzyme, that catalyzes the oxidation and isomerization of cholesterol, pregnenolone, and dehydroepiandrosterone (DHEA) into cholest-4-en-3-one, progesterone, and androsterone, respectively.

Mycobacterium tuberculosis (taxid: 1773)

EC: 5

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 1

>sp|O35048|3BHS7_RAT 3 beta-hydroxysteroid dehydrogenase type 7 OS=Rattus norvegicus GN=Hsd3b7 PE=2 SV=1

 Score = 51.2 bits (121), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 61/152 (40%), Gaps = 10/152 (6%)

Query: 55  PSEKLLVLGGNGFVGSHICREALD-----RGLTVASLSRSGRSSLRDSWANNVIWHQGNL 109
           P+   LV GG GF+G HI R  L+     R L V  L  S       +    V   QG++
Sbjct: 8   PALVYLVTGGCGFLGEHIVRMLLEWEPRLRELRVFDLHLSSWLEELKTGPVQVTAIQGDV 67

Query: 110 LSSDSWKEALDGVTAVISCVG-----GFGSNSYMYKINGTANINAIRAASEKGVKRFVYI 164
             +     A+ G   VI   G     G  S   ++K+N     N I A  + G +  VY 
Sbjct: 68  TQAHEVAAAMAGSHVVIHTAGLVDVFGKASPETIHKVNVQGTQNVIDACVQTGTRLLVYT 127

Query: 165 SAADFGVANYLLQGYYEGKRAAETELLTRYPY 196
           S+ +    N     +Y G      E + R+PY
Sbjct: 128 SSMEVVGPNVKGHPFYRGNEDTPYEAIHRHPY 159

The 3-beta-HSD enzymatic system plays a crucial role in the biosynthesis of all classes of hormonal steroids. HSD VII is active against four 7-alpha-hydroxylated sterols. Does not metabolize several different C(19/21) steroids as substrates. Involved in bile acid synthesis.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	198
224089442	288	predicted protein [Populus trichocarpa]	1.0	0.687	0.823	5e-94
449441836	287	PREDICTED: uncharacterized protein At1g3	1.0	0.689	0.833	4e-93
224142023	287	predicted protein [Populus trichocarpa]	1.0	0.689	0.828	3e-92
225430578	287	PREDICTED: uncharacterized protein At1g3	1.0	0.689	0.843	6e-89
388507480	282	unknown [Lotus japonicus]	0.979	0.687	0.803	2e-88
217073926	199	unknown [Medicago truncatula]	0.989	0.984	0.804	3e-88
255548648	281	conserved hypothetical protein [Ricinus	0.909	0.640	0.872	5e-88
297811177	287	catalytic/ coenzyme binding protein [Ara	1.0	0.689	0.828	3e-87
18416362	287	Rossmann-fold NAD(P)-binding domain-cont	1.0	0.689	0.828	3e-84
356507149	287	PREDICTED: uncharacterized protein At1g3	1.0	0.689	0.828	4e-84

>gi|224089442|ref|XP_002308721.1| predicted protein [Populus trichocarpa] gi|222854697|gb|EEE92244.1| predicted protein [Populus trichocarpa]

 Score =  348 bits (894), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 163/198 (82%), Positives = 184/198 (92%)

Query: 1   MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLL 60
           M ++ SRLI+SR+S+S+L  +  S NGRYLSTDSNKVDEP KVEEAET+NVPPPP+EKLL
Sbjct: 1   MTSLTSRLIHSRTSLSKLYTMAVSSNGRYLSTDSNKVDEPFKVEEAETLNVPPPPTEKLL 60

Query: 61  VLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD 120
           VLGGNGFVGSHIC+EA+DRGLTVASLSRSGR S+++SW NNVIWHQGNLLSSDSW +AL+
Sbjct: 61  VLGGNGFVGSHICKEAVDRGLTVASLSRSGRPSIQESWVNNVIWHQGNLLSSDSWMQALN 120

Query: 121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYY 180
           GVT+VISCVGGFGS SYMYKINGTANINAIRAASEKGVKRFVYISAADFG+ NYLLQGYY
Sbjct: 121 GVTSVISCVGGFGSQSYMYKINGTANINAIRAASEKGVKRFVYISAADFGLVNYLLQGYY 180

Query: 181 EGKRAAETELLTRYPYGG 198
           EGK+AAETELLT++ YGG
Sbjct: 181 EGKKAAETELLTKFAYGG 198

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441836|ref|XP_004138688.1| PREDICTED: uncharacterized protein At1g32220, chloroplastic-like [Cucumis sativus] gi|449493285|ref|XP_004159244.1| PREDICTED: uncharacterized protein At1g32220, chloroplastic-like [Cucumis sativus]

 Score =  346 bits (887), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 165/198 (83%), Positives = 180/198 (90%)

Query: 1   MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLL 60
           M + +SRLI+SRSS  +L  + AS  GR  STDSNK+DEP KVEEAETVNVPPPP+EKLL
Sbjct: 1   MSSTLSRLIHSRSSFPKLYTMAASRGGRPFSTDSNKIDEPFKVEEAETVNVPPPPTEKLL 60

Query: 61  VLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD 120
           VLGGNGFVGSHIC+EAL+RGLTVASLSRSGRSS+RDSWANNVIWHQGNLLS DS  EA D
Sbjct: 61  VLGGNGFVGSHICQEALNRGLTVASLSRSGRSSIRDSWANNVIWHQGNLLSPDSLSEAFD 120

Query: 121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYY 180
           GVTAVISC+GGFGSNS MYKINGTANINAIR AS+KGVKRFVYISAADFG+ANYLLQGYY
Sbjct: 121 GVTAVISCIGGFGSNSQMYKINGTANINAIRVASDKGVKRFVYISAADFGLANYLLQGYY 180

Query: 181 EGKRAAETELLTRYPYGG 198
           EGKRAAETELLT++PYGG
Sbjct: 181 EGKRAAETELLTKFPYGG 198

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142023|ref|XP_002324359.1| predicted protein [Populus trichocarpa] gi|222865793|gb|EEF02924.1| predicted protein [Populus trichocarpa]

 Score =  343 bits (879), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 164/198 (82%), Positives = 181/198 (91%)

Query: 1   MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLL 60
           M  + SRLI SR+S+S+L  I AS NGRYLSTDSNKVDEP KVEEAETVNVPPP +EKLL
Sbjct: 1   MTPLTSRLIQSRTSLSKLFTIAASRNGRYLSTDSNKVDEPFKVEEAETVNVPPPSTEKLL 60

Query: 61  VLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD 120
           VLGGNGFVGSHIC+EA+DRGLTVASLSRSGR S+ D+W NNVIWHQG+LLSS SW EAL+
Sbjct: 61  VLGGNGFVGSHICKEAVDRGLTVASLSRSGRPSIHDAWVNNVIWHQGSLLSSYSWTEALN 120

Query: 121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYY 180
           GVT+VISCVGGFGS SYMYKINGTANINAIRAASEKGVKRFVYIS+ADFG+ANYLLQGYY
Sbjct: 121 GVTSVISCVGGFGSQSYMYKINGTANINAIRAASEKGVKRFVYISSADFGLANYLLQGYY 180

Query: 181 EGKRAAETELLTRYPYGG 198
           EGK+AAETELLT++ YGG
Sbjct: 181 EGKKAAETELLTKFAYGG 198

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430578|ref|XP_002263819.1| PREDICTED: uncharacterized protein At1g32220, chloroplastic [Vitis vinifera] gi|296082186|emb|CBI21191.3| unnamed protein product [Vitis vinifera]

 Score =  332 bits (850), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 167/198 (84%), Positives = 186/198 (93%)

Query: 1   MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLL 60
           M+TI+S+LI+SRSS+SR  A+ A  NGR LSTDSNKVDEPLKVEEAETV++PPPP+EKLL
Sbjct: 1   MKTIISQLIHSRSSLSRFYAMAAFRNGRCLSTDSNKVDEPLKVEEAETVDIPPPPTEKLL 60

Query: 61  VLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD 120
           VLGGNGFVGSHIC+EAL RG+ VASLSRSGRSS+ D WANN+ WH+GNLLSSDSWKEAL 
Sbjct: 61  VLGGNGFVGSHICKEALSRGIAVASLSRSGRSSINDPWANNIEWHRGNLLSSDSWKEALS 120

Query: 121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYY 180
           GVT+VISCVGGFGS+SYMYKINGTANINAIRAA+EKGVKRFVYISAADFGVANYLLQGYY
Sbjct: 121 GVTSVISCVGGFGSSSYMYKINGTANINAIRAAAEKGVKRFVYISAADFGVANYLLQGYY 180

Query: 181 EGKRAAETELLTRYPYGG 198
           EGKRAAETELLT++PYGG
Sbjct: 181 EGKRAAETELLTKFPYGG 198

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507480|gb|AFK41806.1| unknown [Lotus japonicus]

 Score =  330 bits (846), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 159/198 (80%), Positives = 178/198 (89%), Gaps = 4/198 (2%)

Query: 1   MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLL 60
           MRT+VSRLI+S   +SRL+A       R L T+ NKVDEP KVEEAETVNVPPPP+EKLL
Sbjct: 1   MRTLVSRLIHSTPPISRLNATAV----RNLCTEPNKVDEPFKVEEAETVNVPPPPTEKLL 56

Query: 61  VLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD 120
           VLGGNGFVGSH+CREAL+ GL+VASLSRSG+SSL DSWA +VIW++GNL S+DS KEAL+
Sbjct: 57  VLGGNGFVGSHVCREALNHGLSVASLSRSGKSSLHDSWATDVIWYKGNLFSTDSLKEALN 116

Query: 121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYY 180
           GVTAVISCVGGFGSNSYMYKI+GTANINAIRAAS++GVKRFVYISAADFGV NYLLQGYY
Sbjct: 117 GVTAVISCVGGFGSNSYMYKIDGTANINAIRAASDQGVKRFVYISAADFGVVNYLLQGYY 176

Query: 181 EGKRAAETELLTRYPYGG 198
           EGKRAAETELLTR+PYGG
Sbjct: 177 EGKRAAETELLTRFPYGG 194

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217073926|gb|ACJ85323.1| unknown [Medicago truncatula]

 Score =  329 bits (844), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 160/199 (80%), Positives = 181/199 (90%), Gaps = 3/199 (1%)

Query: 1   MRTIVSRLINSRS-SVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKL 59
           M+TI+SRLI+S S S+SRL+A+  S NGR   TDSNK+DEP KVEEAETV  PPPP+EKL
Sbjct: 1   MKTIISRLIHSSSFSISRLNAMAVSINGRSFCTDSNKIDEPFKVEEAETV--PPPPTEKL 58

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL 119
           LVLGGNGFVGSH+CREAL+ GL+VASLSRSG+SSL DSWA NVIW++GNLLS++S KEAL
Sbjct: 59  LVLGGNGFVGSHVCREALNHGLSVASLSRSGKSSLHDSWATNVIWYKGNLLSTESLKEAL 118

Query: 120 DGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGY 179
           +GVTAVISCVGGFGSNS MYKINGTANINAIRAASE+GVKRF+YISAADFGV NYLLQGY
Sbjct: 119 NGVTAVISCVGGFGSNSSMYKINGTANINAIRAASEQGVKRFIYISAADFGVVNYLLQGY 178

Query: 180 YEGKRAAETELLTRYPYGG 198
           YEGKRA ETELLT++PYGG
Sbjct: 179 YEGKRATETELLTKFPYGG 197

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548648|ref|XP_002515380.1| conserved hypothetical protein [Ricinus communis] gi|223545324|gb|EEF46829.1| conserved hypothetical protein [Ricinus communis]

 Score =  328 bits (842), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 157/180 (87%), Positives = 171/180 (95%)

Query: 19  SAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLLVLGGNGFVGSHICREALD 78
           SA+ AS NGRYLSTDSNKVDEP KVEEAETVNVPPP +EKLLVLGGNGFVGSH+C+EALD
Sbjct: 13  SAVAASRNGRYLSTDSNKVDEPFKVEEAETVNVPPPAAEKLLVLGGNGFVGSHVCKEALD 72

Query: 79  RGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYM 138
           RGL V SLSRSGRSS+RDSWAN V WHQG+LLS +SWKEAL+GV+AVISCVGGFGS+S+M
Sbjct: 73  RGLKVDSLSRSGRSSVRDSWANAVTWHQGDLLSPNSWKEALNGVSAVISCVGGFGSHSHM 132

Query: 139 YKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGG 198
           YKINGTANINAIRAASEKGVKRFVYISAADFG+ANYLLQGYYEGKRAAETELLT++PYGG
Sbjct: 133 YKINGTANINAIRAASEKGVKRFVYISAADFGLANYLLQGYYEGKRAAETELLTKFPYGG 192

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297811177|ref|XP_002873472.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata] gi|297319309|gb|EFH49731.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata]

 Score =  326 bits (835), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 164/198 (82%), Positives = 185/198 (93%)

Query: 1   MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLL 60
           MRTIVSRLI  +SS+S++   +ASG GRYLSTDSNK+DEP  VEEAETV+VPPPP+EKLL
Sbjct: 1   MRTIVSRLIRYKSSLSQIRFASASGGGRYLSTDSNKIDEPFNVEEAETVHVPPPPTEKLL 60

Query: 61  VLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD 120
           VLGGNGFVGSH+C+EALDRGL+V+SLSRSG+SSL++SWA+ V WHQGNLLSSD  K+ALD
Sbjct: 61  VLGGNGFVGSHVCKEALDRGLSVSSLSRSGKSSLQESWASRVTWHQGNLLSSDLLKDALD 120

Query: 121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYY 180
           GVT+VISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFG+ANYLL+GYY
Sbjct: 121 GVTSVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGLANYLLRGYY 180

Query: 181 EGKRAAETELLTRYPYGG 198
           EGKRAAETELLTR+ YGG
Sbjct: 181 EGKRAAETELLTRFAYGG 198

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18416362|ref|NP_568236.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|13926273|gb|AAK49607.1|AF372891_1 AT5g10730/MAJ23_90 [Arabidopsis thaliana] gi|16323238|gb|AAL15353.1| AT5g10730/MAJ23_90 [Arabidopsis thaliana] gi|19698949|gb|AAL91210.1| putative protein [Arabidopsis thaliana] gi|21387195|gb|AAM48001.1| unknown protein [Arabidopsis thaliana] gi|21536539|gb|AAM60871.1| unknown [Arabidopsis thaliana] gi|332004206|gb|AED91589.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  316 bits (809), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 164/198 (82%), Positives = 186/198 (93%)

Query: 1   MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLL 60
           MRTIVSRLI  +SS+S++  ++ASG GRYLSTDSNK+DEP  VEEAETV+VPPPP+EKLL
Sbjct: 1   MRTIVSRLIRYQSSLSQIRFVSASGGGRYLSTDSNKIDEPFNVEEAETVHVPPPPTEKLL 60

Query: 61  VLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD 120
           VLGGNGFVGSH+C+EALDRGL+V+SLSRSGRSSL++SWA+ V WHQGNLLSSD  K+AL+
Sbjct: 61  VLGGNGFVGSHVCKEALDRGLSVSSLSRSGRSSLQESWASRVTWHQGNLLSSDLLKDALE 120

Query: 121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYY 180
           GVT+VISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFG+ANYLL+GYY
Sbjct: 121 GVTSVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGLANYLLRGYY 180

Query: 181 EGKRAAETELLTRYPYGG 198
           EGKRAAETELLTR+ YGG
Sbjct: 181 EGKRAAETELLTRFAYGG 198

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356507149|ref|XP_003522333.1| PREDICTED: uncharacterized protein At1g32220, chloroplastic-like [Glycine max]

 Score =  316 bits (809), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 164/198 (82%), Positives = 181/198 (91%)

Query: 1   MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLL 60
           MRT++SRLI+S  S+SRL+A   S +GR L TDSNKVD P KVEEAETVNVPP P+EKLL
Sbjct: 1   MRTVISRLIHSTPSISRLNATVVSISGRNLCTDSNKVDGPFKVEEAETVNVPPLPTEKLL 60

Query: 61  VLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD 120
           VLGGNGFVGSHICREALDR L+VASLSRSGRSSL DSWA NV W++GNLLS+DS KEAL+
Sbjct: 61  VLGGNGFVGSHICREALDRDLSVASLSRSGRSSLHDSWATNVAWYKGNLLSTDSLKEALN 120

Query: 121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYY 180
           GVTAVISCVGGFGSNSYMYKINGTANINAIRAAS++GVKRFVYISAADFGV NYLL+GYY
Sbjct: 121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASDQGVKRFVYISAADFGVVNYLLRGYY 180

Query: 181 EGKRAAETELLTRYPYGG 198
           EGKRA+ETELLTR+PYGG
Sbjct: 181 EGKRASETELLTRFPYGG 198

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	198
TAIR|locus:2159674	287	AT5G10730 [Arabidopsis thalian	1.0	0.689	0.772	4.7e-80
TAIR|locus:2146092	269	AT5G15910 [Arabidopsis thalian	0.898	0.661	0.510	1.6e-45
TAIR|locus:2031710	296	AT1G32220 [Arabidopsis thalian	0.717	0.479	0.430	1.9e-28
ASPGD|ASPL0000045253	287	AN1860 [Emericella nidulans (t	0.378	0.261	0.325	6.3e-08
SGD|S000004281	277	YLR290C "Putative protein of u	0.368	0.263	0.320	2.9e-07
UNIPROTKB|K7GMD9	215	NSDHL "Uncharacterized protein	0.626	0.576	0.270	2.4e-06
UNIPROTKB|F1S2D0	361	NSDHL "Uncharacterized protein	0.626	0.343	0.270	9.7e-06
UNIPROTKB|F6XJP3	361	NSDHL "Uncharacterized protein	0.626	0.343	0.270	1.9e-05
UNIPROTKB|Q0C619	329	HNE_0090 "Putative NADH-quinon	0.696	0.419	0.301	3.9e-05
UNIPROTKB|E2QVH4	373	NSDHL "Uncharacterized protein	0.626	0.332	0.272	6.6e-05

TAIR|locus:2159674 AT5G10730 [Arabidopsis thaliana (taxid:3702)]

 Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
 Identities = 153/198 (77%), Positives = 173/198 (87%)

Query:     1 MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLL 60
             MRTIVSRLI  +SS+S++  ++ASG GRYLSTDSNK+DEP  VEEAETV+VPPPP+EKLL
Sbjct:     1 MRTIVSRLIRYQSSLSQIRFVSASGGGRYLSTDSNKIDEPFNVEEAETVHVPPPPTEKLL 60

Query:    61 VLGGNGFVGSHICREALDRGLTVAXXXXXXXXXXXXXWANNVIWHQGNLLSSDSWKEALD 120
             VLGGNGFVGSH+C+EALDRGL+V+             WA+ V WHQGNLLSSD  K+AL+
Sbjct:    61 VLGGNGFVGSHVCKEALDRGLSVSSLSRSGRSSLQESWASRVTWHQGNLLSSDLLKDALE 120

Query:   121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYY 180
             GVT+VISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFG+ANYLL+GYY
Sbjct:   121 GVTSVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGLANYLLRGYY 180

Query:   181 EGKRAAETELLTRYPYGG 198
             EGKRAAETELLTR+ YGG
Sbjct:   181 EGKRAAETELLTRFAYGG 198

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2146092 AT5G15910 [Arabidopsis thaliana (taxid:3702)]

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 99/194 (51%), Positives = 134/194 (69%)

Query:     1 MRTIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLL 60
             +R+++ +   + SSV  +S+I+  GN R LS          +V  + +         K+L
Sbjct:     2 LRSLIWKRSQAYSSVVTMSSISQRGNERLLS----------EVAGSHS------RDNKIL 45

Query:    61 VLGGNGFVGSHICREALDRGLTVAXXXXXXXXXXXXXWANNVIWHQGNLLSSDSWKEALD 120
             VLGGNG+VGSHIC+EAL +G +V+             W ++V WHQG+LLS DS K AL+
Sbjct:    46 VLGGNGYVGSHICKEALRQGFSVSSLSRSGRSSLHDSWVDDVTWHQGDLLSPDSLKPALE 105

Query:   121 GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYY 180
             G+T+VISCVGGFGSNS M +INGTANINA++AA+E+GVKRFVYISAADFGV N L++GY+
Sbjct:   106 GITSVISCVGGFGSNSQMVRINGTANINAVKAAAEQGVKRFVYISAADFGVINNLIRGYF 165

Query:   181 EGKRAAETELLTRY 194
             EGKRA E E+L ++
Sbjct:   166 EGKRATEAEILDKF 179

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

TAIR|locus:2031710 AT1G32220 [Arabidopsis thaliana (taxid:3702)]

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 62/144 (43%), Positives = 88/144 (61%)

Query:    56 SEKLLVLGGNGFVGSHICREALDRGLTVAXXXXXXXXXXXXXWANNVIWHQGNLLSSDSW 115
             SE+++VLGGNGFVGS IC+ A+  G+ V              W + V W  G++   + W
Sbjct:    62 SERVVVLGGNGFVGSAICKAAISNGIEVVSVSRSGRPNFEDSWLDQVTWVTGDVFYLN-W 120

Query:   116 KEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYL 175
              E L G TAV+S +GGFG+   M +ING AN+ A+ AA + GV +FV I+  D+ +  ++
Sbjct:   121 DEVLLGATAVVSTIGGFGNEEQMKRINGEANVTAVNAAKDFGVPKFVLITVHDYNLPPFI 180

Query:   176 LQ-GYYEGKRAAETELLTRYPYGG 198
             L  GY+ GKR AE ELL++YP  G
Sbjct:   181 LSNGYFTGKRNAEAELLSKYPTSG 204

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0042631 "cellular response to water deprivation" evidence=RCA

ASPGD|ASPL0000045253 AN1860 [Emericella nidulans (taxid:162425)]

 Score = 116 (45.9 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
 Identities = 27/83 (32%), Positives = 42/83 (50%)

Query:    56 SEKLLVLGGNGFVGSHICREALDRGLTVAXXXXX--------XXXXXXXXWANNVIWHQG 107
             S+KL+V GGNGF+GS IC+ A+ RG +V                      WA +V W + 
Sbjct:     3 SKKLVVAGGNGFLGSRICKSAVARGWSVTSISRSGEPRWDVVTSSPQRPGWAKSVEWAKA 62

Query:   108 NLLSSDSWKEALDGVTAVISCVG 130
             ++L  +++K  L    AV+  +G
Sbjct:    63 DILKPNTYKPFLKDANAVVHSMG 85

GO:0008150 "biological_process" evidence=ND

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

SGD|S000004281 YLR290C "Putative protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 112 (44.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
 Identities = 25/78 (32%), Positives = 35/78 (44%)

Query:    58 KLLVLGGNGFVGSHICREALDRGLTVAXXXXXXXXXXXXX-----WANNVIWHQGNLLSS 112
             KL+V GGNGF+G  IC+EA+  G  V                   W   V W   ++   
Sbjct:     4 KLIVFGGNGFLGKRICQEAVTSGYQVVSVSRSGKAPHSNELNDKQWMQEVQWTAADIFKP 63

Query:   113 DSWKEALDGVTAVISCVG 130
             DS+ E L+  T V+  +G
Sbjct:    64 DSYHELLNNATNVVHSLG 81

GO:0008150 "biological_process" evidence=ND

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0003674 "molecular_function" evidence=ND

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|K7GMD9 NSDHL "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 122 (48.0 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 36/133 (27%), Positives = 58/133 (43%)

Query:    39 EPLKVEEAET-VNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVAXXXXXXXXXXXXX 97
             EP+K +  +T +    P   K  V+GG+GF+G H+  + L+RG  V              
Sbjct:     7 EPIKDQVTQTHLTEDIPKDRKCTVIGGSGFLGQHMVEQLLERGYAVNVFDKRQGFDNP-- 64

Query:    98 WANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS---YMYKINGTANINAIRAAS 154
                 V +  G+L +      AL GV+ V  C     S++     Y++N     N I    
Sbjct:    65 ---RVQFFLGDLCNQQDLYPALKGVSTVFHCASPAPSSNNKELFYRVNYIGTKNVIETCR 121

Query:   155 EKGVKRFVYISAA 167
             E GV++ +  S+A
Sbjct:   122 EAGVQKLILTSSA 134

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1S2D0 NSDHL "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 122 (48.0 bits), Expect = 9.7e-06, P = 9.7e-06
 Identities = 36/133 (27%), Positives = 58/133 (43%)

Query:    39 EPLKVEEAET-VNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVAXXXXXXXXXXXXX 97
             EP+K +  +T +    P   K  V+GG+GF+G H+  + L+RG  V              
Sbjct:     7 EPIKDQVTQTHLTEDIPKDRKCTVIGGSGFLGQHMVEQLLERGYAVNVFDKRQGFDNP-- 64

Query:    98 WANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS---YMYKINGTANINAIRAAS 154
                 V +  G+L +      AL GV+ V  C     S++     Y++N     N I    
Sbjct:    65 ---RVQFFLGDLCNQQDLYPALKGVSTVFHCASPAPSSNNKELFYRVNYIGTKNVIETCR 121

Query:   155 EKGVKRFVYISAA 167
             E GV++ +  S+A
Sbjct:   122 EAGVQKLILTSSA 134

GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA

GO:0008203 "cholesterol metabolic process" evidence=IEA

GO:0007224 "smoothened signaling pathway" evidence=IEA

GO:0005811 "lipid particle" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0001942 "hair follicle development" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F6XJP3 NSDHL "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 120 (47.3 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 36/133 (27%), Positives = 56/133 (42%)

Query:    39 EPLKVEEAET-VNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVAXXXXXXXXXXXXX 97
             EP++ +   T +    P + K  V+GG+GF+G H+  + L RG TV              
Sbjct:     7 EPMRDQVTRTHLTEGLPNASKCTVIGGSGFLGQHMVEQLLARGYTVNVFDMRQGFDNP-- 64

Query:    98 WANNVIWHQGNLLSSDSWKEALDGVTAVISCVG---GFGSNSYMYKINGTANINAIRAAS 154
                 V +  G+L S      AL GV+ V  C        +    Y++N     N I    
Sbjct:    65 ---RVQFFLGDLCSQQDLYPALKGVSTVFHCASPPPSSNNKELFYRVNYIGTKNVIETCK 121

Query:   155 EKGVKRFVYISAA 167
             E GV++ +  S+A
Sbjct:   122 EAGVQKLILTSSA 134

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q0C619 HNE_0090 "Putative NADH-quinone oxidoreductase" [Hyphomonas neptunium ATCC 15444 (taxid:228405)]

 Score = 117 (46.2 bits), Expect = 3.9e-05, P = 3.9e-05
 Identities = 44/146 (30%), Positives = 64/146 (43%)

Query:    56 SEKLLVL-GGNGFVGSHICREALDRGLTVAXXXXXXXXXXXXXWANNVIWH---QGNLLS 111
             S+ L+ L GG+GF+G +  R  +++G  V               A    W    Q N+  
Sbjct:     2 SKGLVTLVGGSGFIGRYAARALVEKGWRVRVACRRVHNAIDVRLAGPPGWVDVVQANIRD 61

Query:   112 SDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRA--ASEKGVKRFVYISAADF 169
               S + A+DG  AV++ VG    ++         +  A+ A  A EKG+KRFV ISA   
Sbjct:    62 RASLERAVDGADAVVNLVGILFEHARQTFEGAQTDGAALLAEVAREKGIKRFVQISA--I 119

Query:   170 GVANYLLQGYYEGKRAAETELLTRYP 195
             G        Y   K AAE  +  R+P
Sbjct:   120 GADPDSRSPYGRTKAAAEEAVRERFP 145

GO:0050136 "NADH dehydrogenase (quinone) activity" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=ISS

UNIPROTKB|E2QVH4 NSDHL "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 116 (45.9 bits), Expect = 6.6e-05, P = 6.6e-05
 Identities = 36/132 (27%), Positives = 53/132 (40%)

Query:    39 EPLKVEEAETVNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVAXXXXXXXXXXXXXW 98
             E L     +T  V    + K  V+GG+GF+G H+  + L RG TV               
Sbjct:    20 EGLPNVSTDTKKVNQNQASKCTVIGGSGFLGQHMVEQLLARGYTVNVFDMRQGFDNP--- 76

Query:    99 ANNVIWHQGNLLSSDSWKEALDGVTAVISCVG---GFGSNSYMYKINGTANINAIRAASE 155
                V +  G+L S      AL GV+ V  C        +    Y++N     N I    E
Sbjct:    77 --RVQFFLGDLCSQQDLYPALKGVSTVFHCASPPPSSNNKELFYRVNYIGTKNVIETCKE 134

Query:   156 KGVKRFVYISAA 167
              GV++ +  S+A
Sbjct:   135 AGVQKLILTSSA 146

GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA

GO:0008203 "cholesterol metabolic process" evidence=IEA

GO:0007224 "smoothened signaling pathway" evidence=IEA

GO:0005811 "lipid particle" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0001942 "hair follicle development" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_VI001941 hypothetical protein (288 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	198
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	3e-24
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	3e-17
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	4e-17
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	5e-17
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	9e-17
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	1e-16
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	2e-16
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	1e-14
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	2e-14
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	2e-14
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	6e-14
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	2e-13
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	6e-13
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	2e-11
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	3e-11
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	2e-10
cd08946	200	cd08946, SDR_e, extended (e) SDRs	4e-10
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	4e-10
CHL00194	317	CHL00194, ycf39, Ycf39; Provisional	9e-10
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	2e-09
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	2e-09
pfam05368	232	pfam05368, NmrA, NmrA-like family	2e-09
cd05250	214	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical	2e-09
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	3e-09
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	3e-09
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	8e-09
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	1e-08
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	2e-08
COG2910	211	COG2910, COG2910, Putative NADH-flavin reductase [	3e-08
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	3e-08
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	5e-08
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	5e-08
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	2e-07
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	2e-07
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	3e-07
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	6e-07
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	1e-06
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	6e-06
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	1e-05
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	3e-05
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	6e-05
PLN02695	370	PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase	7e-05
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	8e-05
cd05267	203	cd05267, SDR_a6, atypical (a) SDRs, subgroup 6	1e-04
PRK09009	235	PRK09009, PRK09009, C factor cell-cell signaling p	2e-04
TIGR03649	285	TIGR03649, ergot_EASG, ergot alkaloid biosynthesis	3e-04
COG1091	281	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C	4e-04
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	8e-04
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	0.001
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	0.002
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	0.002
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	0.002
PLN02240	352	PLN02240, PLN02240, UDP-glucose 4-epimerase	0.003
COG1748	389	COG1748, LYS9, Saccharopine dehydrogenase and rela	0.003
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	0.003
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	0.003

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 93.8 bits (234), Expect = 3e-24
 Identities = 52/139 (37%), Positives = 67/139 (48%), Gaps = 9/139 (6%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+LV+G  G VG H+ RE LDRG  V +L R   S      A       G+L  ++S   
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRALVRD-PSQAEKLEAAGAEVVVGDLTDAESLAA 59

Query: 118 ALDGVTAVISCVGGFGSNSYMY-KINGTANINAIRAASEKGVKRFVYISAADFGVANY-- 174
           AL+G+ AVIS  G  G        ++   NIN I AA + GVKRFV +S+   G      
Sbjct: 60  ALEGIDAVISAAGSGGKGGPRTEAVDYDGNINLIDAAKKAGVKRFVLVSS--IGADKPSH 117

Query: 175 ---LLQGYYEGKRAAETEL 190
               L  Y + KR AE  L
Sbjct: 118 PLEALGPYLDAKRKAEDYL 136

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 77.7 bits (192), Expect = 3e-17
 Identities = 45/152 (29%), Positives = 62/152 (40%), Gaps = 23/152 (15%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL 119
           LV G  GF+GS++ R  L +G  V +L RSG S         V   +G+L  + S   A+
Sbjct: 2   LVTGATGFLGSNLVRALLAQGYRVRALVRSG-SDAVLLDGLPVEVVEGDLTDAASLAAAM 60

Query: 120 DGVTAVISCVGGF----GSNSYMYKIN--GTANINAIRAASEKGVKRFVYISA-ADFGVA 172
            G   V                +Y+ N  GT N+  + AA E GV+R V+ S+ A  G  
Sbjct: 61  KGCDRVFHLAAFTSLWAKDRKELYRTNVEGTRNV--LDAALEAGVRRVVHTSSIAALGGP 118

Query: 173 -------NYLLQG------YYEGKRAAETELL 191
                              YY  K  AE E+L
Sbjct: 119 PDGRIDETTPWNERPFPNDYYRSKLLAELEVL 150

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 75.0 bits (185), Expect = 4e-17
 Identities = 41/141 (29%), Positives = 55/141 (39%), Gaps = 20/141 (14%)

Query: 59  LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA 118
           + V+G  G  G  + +E L RG  V +LSR+  S         V   Q +L       EA
Sbjct: 1   IAVIGATGKTGRRLVKELLARGHQVTALSRNP-SKAPAPGVTPV---QKDLFDLADLAEA 56

Query: 119 LDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA---------DF 169
           L GV AV+   G    +S           + + AA+  GV+R V +SAA           
Sbjct: 57  LAGVDAVVDAFGARPDDS-------DGVKHLLDAAARAGVRRIVVVSAAGLYRDEPGTFR 109

Query: 170 GVANYLLQGYYEGKRAAETEL 190
                L   Y   K AAE  L
Sbjct: 110 LDDAPLFPPYARAKAAAEELL 130

Length = 182

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 75.4 bits (186), Expect = 5e-17
 Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 7/112 (6%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+ ++G  G  GS I REAL RG  V +L R       +     V+  QG++L  +  KE
Sbjct: 1   KIAIIGATGRTGSAIVREALARGHEVTALVRDPAKLPAEHEKLKVV--QGDVLDLEDVKE 58

Query: 118 ALDGVTAVISCVGGFGSNS--YMYKINGTANINAIRAASEKGVKRFVYISAA 167
           AL+G  AVIS +G     S   ++   GT NI  + A    GVKR + +  A
Sbjct: 59  ALEGQDAVISALGTRNDLSPTTLH-SEGTRNI--VSAMKAAGVKRLIVVGGA 107

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 75.7 bits (186), Expect = 9e-17
 Identities = 38/130 (29%), Positives = 51/130 (39%), Gaps = 5/130 (3%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+LV G  GFVG  + RE L RG  V +  R+  ++   + A  V    G+L    S   
Sbjct: 2   KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAA--AALAGGVEVVLGDLRDPKSLVA 59

Query: 118 ALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQ 177
              GV  V+   G    +     +  TA + A  AA   GVK  V +S    G       
Sbjct: 60  GAKGVDGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGA-GVKHGVSLSVL--GADAASPS 116

Query: 178 GYYEGKRAAE 187
                K A E
Sbjct: 117 ALARAKAAVE 126

Length = 275

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 75.0 bits (185), Expect = 1e-16
 Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 9/117 (7%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANN---VIWHQGNLLSSDS 114
            + V G  GF+G ++      RG  V    R    + R     +   V++ + +L   +S
Sbjct: 2   VVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDLGQVLFVEFDLRDDES 61

Query: 115 WKEALDGVTAVISCVG---GFGSNSYMY-KINGTANINAIRAASEKGVKRFVYISAA 167
            ++AL+G   VI+ VG      + S+    + G   +   +AA E GV+R ++ISA 
Sbjct: 62  IRKALEGSDVVINLVGRLYETKNFSFEDVHVEGPERL--AKAAKEAGVERLIHISAL 116

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 74.2 bits (183), Expect = 2e-16
 Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 10/116 (8%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL 119
           LV GG GF+GSH+ R  L  G  V  L R  RS   ++      +H+G+L   D+ +  L
Sbjct: 2   LVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIR--FHEGDLTDPDALERLL 59

Query: 120 DGV--TAVISCVGG------FGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA 167
             V   AVI           F   +   + N    +  + AA   GVKRFV+ S++
Sbjct: 60  AEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFASSS 115

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 70.4 bits (172), Expect = 1e-14
 Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 10/118 (8%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           ++LV GG GF+GSH+    L  G  V  L R           + V +   +L   D   E
Sbjct: 2   RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPL--LSGVEFVVLDLTDRDLVDE 59

Query: 118 ALDGVTAVI----SCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISAA 167
              GV   +    +      SN    +    +N    +N + AA   GVKRFV+ S+ 
Sbjct: 60  LAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSV 117

Length = 314

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 69.6 bits (171), Expect = 2e-14
 Identities = 39/134 (29%), Positives = 55/134 (41%), Gaps = 18/134 (13%)

Query: 58  KLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK 116
           K+ + G  G +G  I    L   G TV  L+R   +S  +   + V     +  S +S  
Sbjct: 1   KIAIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSNEFQPSGVKVVPVDYASHESLV 60

Query: 117 EALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGV----- 171
            AL GV AVIS +GG               +  I AA   GVKRF+    ++FGV     
Sbjct: 61  AALKGVDAVISALGGAAIGD---------QLKLIDAAIAAGVKRFI---PSEFGVDYDRI 108

Query: 172 ANYLLQGYYEGKRA 185
               L   ++ KR 
Sbjct: 109 GALPLLDLFDEKRD 122

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 69.3 bits (170), Expect = 2e-14
 Identities = 33/106 (31%), Positives = 47/106 (44%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL 119
           LV G  G+VG  +    L  G  V +L RS        W+  V   +G+L   +S + AL
Sbjct: 2   LVTGATGYVGGRLVPRLLQEGHQVRALVRSPEKLADRPWSERVTVVRGDLEDPESLRAAL 61

Query: 120 DGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYIS 165
           +G+      V   GS     + +  A  N  RAA   GVKR +Y+ 
Sbjct: 62  EGIDTAYYLVHSMGSGGDFEEADRRAARNFARAARAAGVKRIIYLG 107

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 68.1 bits (167), Expect = 6e-14
 Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 9/118 (7%)

Query: 60  LVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWAN-NVI-WHQGNLLSSDSW 115
           LV GG GF+G HI R  L  G    V          L + ++   VI + +G++      
Sbjct: 1   LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQVITYIEGDVTDKQDL 60

Query: 116 KEALDGV-----TAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAAD 168
           + AL G      TA I  V G      + K+N     N + A  + GV+  VY S+ +
Sbjct: 61  RRALQGSDVVIHTAAIIDVFGKAYRDTIMKVNVKGTQNVLDACVKAGVRVLVYTSSME 118

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 66.9 bits (164), Expect = 2e-13
 Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 15/137 (10%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+LV G  GFVGS + R  L++G  V  L R   S  R+    +V   +G+L    S ++
Sbjct: 2   KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPT-SDRRNLEGLDVEIVEGDLRDPASLRK 60

Query: 118 ALDGVTAVISCVGGF----GSNSYMYKIN--GTANINAIRAASEKGVKRFVYISAADFGV 171
           A+ G  A+      +         MY  N  GT N+  +RAA E GV+R VY S+    V
Sbjct: 61  AVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNL--LRAALEAGVERVVYTSS----V 114

Query: 172 ANYLLQGYYEGKRAAET 188
           A   L    +G  A ET
Sbjct: 115 A--TLGVRGDGTPADET 129

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 65.4 bits (160), Expect = 6e-13
 Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 22/128 (17%)

Query: 58  KLLVLGGNGFVGSHICREALDRG----LTVASLSRSG--RSSLRDSWANN----VIWHQG 107
            +LV G  GF+ SHI  + L  G     TV SLS+S   ++ L+ +  N+    VI    
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVI--VD 58

Query: 108 NLLSSDSWKEALDGVTAVISCVGGFGSNSYMYK-------INGTANI-NAIRAASEKGVK 159
           +L + ++W EAL GV  VI     F       +       + GT N+  A +AA    VK
Sbjct: 59  DLTAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAVEGTLNVLEAAKAA--GSVK 116

Query: 160 RFVYISAA 167
           R V  S+ 
Sbjct: 117 RVVLTSSV 124

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 59.3 bits (144), Expect = 2e-11
 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 7/139 (5%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL 119
           L+LG  GF+G  + RE L++G  V  L R+ +   ++      +  +G+L   DS  +A+
Sbjct: 2   LILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPVAV-VEGDLRDLDSLSDAV 60

Query: 120 DGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA-----DFGVANY 174
            GV  VI   G         +++     N + AA E GVK F++IS+             
Sbjct: 61  QGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFISSLGAYGDLHEETEP 120

Query: 175 LLQGYYEGKRAAETELLTR 193
                Y     A+TE + R
Sbjct: 121 SPSSPY-LAVKAKTEAVLR 138

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 60.5 bits (147), Expect = 3e-11
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 60  LVLGGNGFVGSHICREALDRGLT-VASLSRS-GRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           LV GG+GF G  + ++ L+RG T V S   +    +L      N+ + +G++   +  ++
Sbjct: 3   LVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPNIEFLKGDITDRNDVEQ 62

Query: 118 ALDGVTAVISC---VGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA 167
           AL G   V      V   G     +++N     N + A    GV++FVY S++
Sbjct: 63  ALSGADCVFHTAAIVPLAGPRDLYWEVNVGGTQNVLDACQRCGVQKFVYTSSS 115

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 58.1 bits (141), Expect = 2e-10
 Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 17/117 (14%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+LV G NGF+G  +  + L RG  V    R+      ++   +V+  +  L   DS+ +
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIAVRN-----AENAEPSVVLAE--LPDIDSFTD 53

Query: 118 ALDGVTAVISCVGGFGSNS---------YMYKINGTANINAIRAASEKGVKRFVYIS 165
              GV AV+         +         Y  K+N        RAA+ +GVKRFV++S
Sbjct: 54  LFLGVDAVVHLAARVHVMNDQGADPLSDYR-KVNTELTRRLARAAARQGVKRFVFLS 109

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 56.5 bits (137), Expect = 4e-10
 Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 29/107 (27%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLS-SDSWKEA 118
           LV GG GF+GSH+ R  L+RG  V  + R            +V+ H   L+    SW   
Sbjct: 2   LVTGGAGFIGSHLVRRLLERGHEVVVIDRL-----------DVVVHLAALVGVPASWDNP 50

Query: 119 LDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYIS 165
            +                  ++ N    +N + AA + GVKRFVY S
Sbjct: 51  DE-----------------DFETNVVGTLNLLEAARKAGVKRFVYAS 80

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 57.2 bits (139), Expect = 4e-10
 Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 10/119 (8%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSR--SGRSSLRDSWANNVIWHQGNLLSSDSW 115
           ++LV GG GF+GSH+    L+RG  V  L    +G+         NV + +G++   +  
Sbjct: 1   RVLVTGGAGFIGSHLVERLLERGHEVIVLDNLSTGKKENLPEVKPNVKFIEGDIRDDELV 60

Query: 116 KEALDGVTAVISCVGGFGSNS-------YMYKINGTANINAIRAASEKGVKRFVYISAA 167
           + A +GV  V        S           +++N    +N + AA + GVKRFVY S++
Sbjct: 61  EFAFEGVDYVFH-QAAQASVPRSIEDPIKDHEVNVLGTLNLLEAARKAGVKRFVYASSS 118

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional

 Score = 56.5 bits (137), Expect = 9e-10
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 6/111 (5%)

Query: 59  LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS--LRDSWANNVIWHQGNLLSSDSWK 116
           LLV+G  G +G  I R+ALD G  V  L R+ R +  L++ W   +++  G+L   ++  
Sbjct: 3   LLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKE-WGAELVY--GDLSLPETLP 59

Query: 117 EALDGVTAVISCVGGFGSNSY-MYKINGTANINAIRAASEKGVKRFVYISA 166
            +  GVTA+I       S+ Y   +I+    +  I AA    +KRF++ S 
Sbjct: 60  PSFKGVTAIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSI 110

Length = 317

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 8/114 (7%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           ++L++GGNGF+GSH+    L+ G  V    RS            V + +G+  +    + 
Sbjct: 1   RVLIVGGNGFIGSHLVDALLEEGPQVRVFDRSIPPYELPLGG--VDYIKGDYENRADLES 58

Query: 118 ALDGVTAVI-----SCVGGFGSN-SYMYKINGTANINAIRAASEKGVKRFVYIS 165
           AL G+  VI     +       N     + N    +  + A +  G+ + ++ S
Sbjct: 59  ALVGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAGIGKIIFAS 112

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 11/117 (9%)

Query: 60  LVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA 118
           LV+GG+GF+G H+  + L RG  TV          L  S +  V +H G+L      ++A
Sbjct: 3   LVVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFELDPSSSGRVQFHTGDLTDPQDLEKA 62

Query: 119 LD--GVTAVISC---VGGFGSNSYMYKIN--GTANINAIRAASEKGVKRFVYISAAD 168
            +  G   V        G   + Y YK+N  GT N+  I A  + GVK+ VY S+A 
Sbjct: 63  FNEKGPNVVFHTASPDHGSNDDLY-YKVNVQGTRNV--IEACRKCGVKKLVYTSSAS 116

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 55.0 bits (133), Expect = 2e-09
 Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 10/126 (7%)

Query: 59  LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANN-VIWHQGNLLSSDSWKE 117
           +LV G  G+ G  + R +L  G  V +L R  +S L  S     V   +G+L   +S  E
Sbjct: 1   ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAAGVELVEGDLDDHESLVE 60

Query: 118 ALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQ 177
           AL GV  V S  G + S                 AA E GVK F+    ++FG       
Sbjct: 61  ALKGVDVVFSVTGFWLSKEIEDG------KKLADAAKEAGVKHFIP---SEFGNDVDRSN 111

Query: 178 GYYEGK 183
           G     
Sbjct: 112 GVEPAV 117

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|187560 cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs

 Score = 54.6 bits (132), Expect = 2e-09
 Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 8/114 (7%)

Query: 60  LVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           LVLG  G VG H+ RE L       V ++ R  R          ++    +    D + E
Sbjct: 4   LVLGATGLVGKHLLRELLKSPYYSKVTAIVR--RKLTFPEAKEKLVQIVVDFERLDEYLE 61

Query: 118 ALDGVTAVISCVG----GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA 167
           A         C+G      GS     K++    +   + A   GV+ F+ +S+ 
Sbjct: 62  AFQNPDVGFCCLGTTRKKAGSQENFRKVDHDYVLKLAKLAKAAGVQHFLLVSSL 115

Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 214

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 55.2 bits (133), Expect = 3e-09
 Identities = 46/190 (24%), Positives = 85/190 (44%), Gaps = 21/190 (11%)

Query: 3   TIVSRLINSRSSVSRLSAITASGNGRYLSTDSNKVDEPLKVEEAETVNVPPPPSEKLLVL 62
           ++ +    S S  +RL+A +  G     +  +++         A++     P    +LV+
Sbjct: 8   SLRAAAAASSSPSNRLAA-SLGGALVRRAAAASRGSRATAAAAAQSFRSKEPKDVTVLVV 66

Query: 63  GGNGFVGSHICREALDRGLTVASLSR--------SGRSSLRDSWANNVIWHQGNLLSSDS 114
           G  G++G  + RE + RG  V +++R        +G+   +       +   G++  +DS
Sbjct: 67  GATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVV-FGDVTDADS 125

Query: 115 WKEAL----DGVTAVISCV---GGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA 167
            ++ L    D V  V+SC+    G   +S  +KI+  A  N++ A  E G K FV +SA 
Sbjct: 126 LRKVLFSEGDPVDVVVSCLASRTGGVKDS--WKIDYQATKNSLDAGREVGAKHFVLLSA- 182

Query: 168 DFGVANYLLQ 177
              V   LL+
Sbjct: 183 -ICVQKPLLE 191

Length = 390

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 54.6 bits (132), Expect = 3e-09
 Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 11/132 (8%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL 119
           LV G  G +G+ +    L +  +V +L R+   +     A+ V   QG+    ++ + A 
Sbjct: 2   LVTGATGKLGTAVVELLLAKVASVVALVRNPEKAK-AFAADGVEVRQGDYDDPETLERAF 60

Query: 120 DGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVAN-YLLQG 178
           +GV  ++       S S +       + N I AA + GVK  VY+SA+     + +LL  
Sbjct: 61  EGVDRLL-----LISPSDLED-RIQQHKNFIDAAKQAGVKHIVYLSASGADEDSPFLLAR 114

Query: 179 YYEGKRAAETEL 190
            +    A E  L
Sbjct: 115 DH---GATEKYL 123

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 53.7 bits (130), Expect = 8e-09
 Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 15/127 (11%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           K+LV GG G++GSH  R+ L  G  V    +LS   + +L         +++G+LL    
Sbjct: 2   KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALL---KLQFKFYEGDLLDRAL 58

Query: 115 WKEALD--GVTAVISC-----VGGFGSNSYMYKINGTAN-INAIRAASEKGVKRFVYIS- 165
                +   + AV+       VG    N   Y  N     +N I A  + GVK+F++ S 
Sbjct: 59  LTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSST 118

Query: 166 AADFGVA 172
           AA +G  
Sbjct: 119 AAVYGEP 125

Length = 329

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 53.1 bits (128), Expect = 1e-08
 Identities = 39/164 (23%), Positives = 61/164 (37%), Gaps = 31/164 (18%)

Query: 59  LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNL-- 109
           + V GG GF+G H+ +  L+ G  V  L RS                A+ V   +G+L  
Sbjct: 1   VFVTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQ 60

Query: 110 ----LSSDSWKEALDGVTAVISCVGGF---GSNSYMYKINGTANINAIRAASEKGVKRFV 162
               LS+ + +E    V  VI C   +     N   ++ N     + +  A+   ++RF 
Sbjct: 61  PNLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGTEHVLELAARLDIQRFH 120

Query: 163 YISAA-------------DFGVANYLLQGYYEGKRAAETELLTR 193
           Y+S A             +          Y + K  AE E L R
Sbjct: 121 YVSTAYVAGNREGNIRETELNPGQNFKNPYEQSK--AEAEQLVR 162

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 52.5 bits (127), Expect = 2e-08
 Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 22/135 (16%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           K+LV GG G++GSH   E L+ G  V    +LS   R +L       + +++G++     
Sbjct: 1   KVLVTGGAGYIGSHTVVELLEAGYDVVVLDNLSNGHREALPRIEKIRIEFYEGDIRD--- 57

Query: 115 WKEALDGV------TAVI-----SCVGGFGSN--SYMYKINGTANINAIRAASEKGVKRF 161
            + ALD V       AVI       VG        Y Y  N    +N + A    GVK F
Sbjct: 58  -RAALDKVFAEHKIDAVIHFAALKAVGESVQKPLKY-YDNNVVGTLNLLEAMRAHGVKNF 115

Query: 162 VYIS-AADFGVANYL 175
           V+ S AA +G    +
Sbjct: 116 VFSSSAAVYGEPETV 130

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|225462 COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only]

 Score = 51.2 bits (123), Expect = 3e-08
 Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 9/112 (8%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRS-GRSSLRDSWANNVIWHQGNLLSSDSWK 116
           K+ ++G +G  GS I +EAL RG  V ++ R+  + + R      V   Q ++    S  
Sbjct: 2   KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQ----GVTILQKDIFDLTSLA 57

Query: 117 EALDGVTAVISCVG-GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA 167
             L G  AVIS  G G   N  ++  +  A I A++ A   GV R + +  A
Sbjct: 58  SDLAGHDAVISAFGAGASDNDELHSKSIEALIEALKGA---GVPRLLVVGGA 106

Length = 211

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 52.1 bits (125), Expect = 3e-08
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 10/119 (8%)

Query: 57  EKLLVLGGNGFVGSHICREALDRGLTV-ASLSRSGRSSLRDSWANNVIWHQGNLLSSDSW 115
           ++ LV G  GF+GSH+       G  V  +  +S     + +  +    H  +L   ++ 
Sbjct: 1   QRALVTGAGGFIGSHLAERLKAEGHYVRGADWKSPEHMTQPTDDDEF--HLVDLREMENC 58

Query: 116 KEALDGVTAVISC---VGGFG----SNSYMYKINGTANINAIRAASEKGVKRFVYISAA 167
            +A +GV  V      +GG G    +++ +   N   N N + AA   GV+RF++ S+A
Sbjct: 59  LKATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARINGVERFLFASSA 117

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 51.1 bits (122), Expect = 5e-08
 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 14/121 (11%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRS--------SLRDSWANNVIWHQGNLLS 111
           LV G +GFV SH+  + L+RG  V +  R             L        +    +L  
Sbjct: 2   LVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELA-VADLTD 60

Query: 112 SDSWKEALDGVTAV--ISCVGGFGSN--SYMYKINGTANINAIRAASE-KGVKRFVYISA 166
             S+ E + G   V  ++    F S   + + K      +NA++AA+  K VKRFV  S+
Sbjct: 61  EQSFDEVIKGCAGVFHVATPVSFSSKDPNEVIKPAIGGTLNALKAAAAAKSVKRFVLTSS 120

Query: 167 A 167
           A
Sbjct: 121 A 121

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 51.1 bits (123), Expect = 5e-08
 Identities = 33/164 (20%), Positives = 51/164 (31%), Gaps = 34/164 (20%)

Query: 63  GGNGFVGSHICREALDRGLTV-------ASLSRSGRSSLRDSWANNVIWHQ--------- 106
           G  GF+G  +  + L     V       A    S    LR       ++ +         
Sbjct: 3   GATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERIIP 62

Query: 107 --GNL------LSSDSWKEALDGVTAVISC---VGGFGSNSYMYKIN--GTANINAIRAA 153
             G+L      LS + ++E  + V  +I     V      S +   N  GT  +  +R A
Sbjct: 63  VAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNFVEPYSDLRATNVLGTREV--LRLA 120

Query: 154 SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYG 197
            +     F ++S A     N    G  E K     E       G
Sbjct: 121 KQMKKLPFHHVSTA---YVNGERGGLLEEKPYKLDEDEPALLGG 161

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS--LRDSWANNVIWHQGNLLSSDSW 115
           K+ V G  GF+GS + RE +  G  V  L+RS   +  L  + A     H+G+L   D  
Sbjct: 2   KVFVTGATGFIGSAVVRELVAAGHEVVGLARSDAGAAKLEAAGA---QVHRGDLEDLDIL 58

Query: 116 KEALDGVTAVISC--VGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166
           ++A     AVI       F + +   +++  A I A+  A     K  +Y S 
Sbjct: 59  RKAAAEADAVIHLAFTHDFDNFAQACEVDRRA-IEALGEALRGTGKPLIYTSG 110

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 49.2 bits (118), Expect = 2e-07
 Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 5/112 (4%)

Query: 59  LLVLGGNGFVGSHICREAL-DRGLTVASLSRSGRSSLRDSWAN-NVIWHQGNLLSSDSWK 116
           +LV G  G  G  + R  L D G  V +L+R   S    + A   V   QG+L   +S +
Sbjct: 1   ILVFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKALAAPGVEVVQGDLDDPESLE 60

Query: 117 EALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAAD 168
            AL GV  V   V  F       +I      N + AA   GV+ FV+ S  D
Sbjct: 61  AALKGVYGVFL-VTDFWEAGGEDEI--AQGKNVVDAAKRAGVQHFVFSSVPD 109

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 49.2 bits (118), Expect = 3e-07
 Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 14/120 (11%)

Query: 58  KLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDSWANNVIWH--QGNLLSSD 113
            +LV G +GF+GSH+    L  G  +    +  S  S      A +  +H   G++  + 
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHFISGDVRDAS 60

Query: 114 SWKEALDGVTAVI---SCVGGFGSN----SYMYK-INGTANINAIRAASEKGVKRFVYIS 165
             +  +     V    + +    S     SY+   + GT N+  + AA     KR V+ S
Sbjct: 61  EVEYLVKKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNV--LEAACVLYRKRVVHTS 118

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 48.3 bits (115), Expect = 6e-07
 Identities = 37/156 (23%), Positives = 60/156 (38%), Gaps = 23/156 (14%)

Query: 59  LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWH------------- 105
            LV GG GF+G HI R  L+R   +  +       L  ++   +I H             
Sbjct: 2   CLVTGGGGFLGQHIIRLLLERKEELKEI-----RVLDKAFGPELIEHFEKSQGKTYVTDI 56

Query: 106 QGNLLSSDSWKEALDGVTAVISCVGG---FGSNSY--MYKINGTANINAIRAASEKGVKR 160
           +G++        A  GV+ VI        FG  +Y  + ++N       + A  +  VKR
Sbjct: 57  EGDIKDLSFLFRACQGVSVVIHTAAIVDVFGPPNYEELEEVNVNGTQAVLEACVQNNVKR 116

Query: 161 FVYISAADFGVANYLLQGYYEGKRAAETELLTRYPY 196
            VY S+ +    N+  +  + G      E  +  PY
Sbjct: 117 LVYTSSIEVAGPNFKGRPIFNGVEDTPYEDTSTPPY 152

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 12/122 (9%)

Query: 58  KLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLRD-SWANNVIWHQGNLLSSD 113
           K+LV GG G++GSH  R+ L+ G   + + +LS   R +L        V + +G+L   +
Sbjct: 1   KILVTGGAGYIGSHTVRQLLESGHEVVILDNLSNGSREALPRGERITPVTFVEGDLRDRE 60

Query: 114 SWKEALDG--VTAVI-----SCVGGFGSNSYMYKINGTAN-INAIRAASEKGVKRFVYIS 165
                 +   + AVI       VG        Y  N     +N + A  + GVK+F++ S
Sbjct: 61  LLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAGVKKFIFSS 120

Query: 166 AA 167
           +A
Sbjct: 121 SA 122

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 45.4 bits (108), Expect = 6e-06
 Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 3/73 (4%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
              VLG +G +G  + RE   RG  V  +SRSG           V     + + + S   
Sbjct: 1   TAHVLGASGPIGREVARELRRRGWDVRLVSRSGSKLAWLP---GVEIVAADAMDASSVIA 57

Query: 118 ALDGVTAVISCVG 130
           A  G   +  C  
Sbjct: 58  AARGADVIYHCAN 70

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score = 44.1 bits (105), Expect = 1e-05
 Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 31/129 (24%)

Query: 61  VLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-------------SWANNVIW-HQ 106
           V G +GF+GS + +  L RG TV       R+++RD               A   +   +
Sbjct: 3   VTGASGFIGSWLVKRLLQRGYTV-------RATVRDPGDEKKVAHLLELEGAKERLKLFK 55

Query: 107 GNLLSSDSWKEALDGVTAV--ISCVGGFGSNSY---MYK--INGTANINAIRAASE-KGV 158
            +LL   S+  A+DG   V  ++    F S      M +  + GT  +N + A ++ K V
Sbjct: 56  ADLLDYGSFDAAIDGCDGVFHVASPVDFDSEDPEEEMIEPAVKGT--LNVLEACAKAKSV 113

Query: 159 KRFVYISAA 167
           KR V+ S+ 
Sbjct: 114 KRVVFTSSV 122

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 30/122 (24%), Positives = 46/122 (37%), Gaps = 32/122 (26%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+L+ G  G +G  + R   +RG  V    RS                + +L   D+ +E
Sbjct: 1   KILITGATGMLGRALVRLLKERGYEVIGTGRS-----------RASLFKLDLTDPDAVEE 49

Query: 118 ALDGV--TAVISCVGGFGSNSYM------------YKINGTANINAIRAASEKGVKRFVY 163
           A+       +I+C        Y             Y++N  A  N  RAA E G  R ++
Sbjct: 50  AIRDYKPDVIINCAA------YTRVDKCESDPELAYRVNVLAPENLARAAKEVGA-RLIH 102

Query: 164 IS 165
           IS
Sbjct: 103 IS 104

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 42.2 bits (100), Expect = 6e-05
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 7/69 (10%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+++ GG GF+G  + R     G  V  LSR    +     A  + W     LS   W  
Sbjct: 1   KIVITGGTGFIGRALTRRLTAAGHEVVVLSRRPGKAEGL--AEVITWDG---LSLGPW-- 53

Query: 118 ALDGVTAVI 126
            L G  AVI
Sbjct: 54  ELPGADAVI 62

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase

 Score = 42.1 bits (99), Expect = 7e-05
 Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 12/126 (9%)

Query: 52  PPPPSEKL--LVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGN 108
           P  PSEKL   + G  GF+ SHI R     G   +AS  +       D + +   +H  +
Sbjct: 15  PYWPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHE--FHLVD 72

Query: 109 LLSSDSWKEALDGVTAVISC---VGGFG---SNSYMYKINGTA-NINAIRAASEKGVKRF 161
           L   ++  +   GV  V +    +GG G   SN  +   N T  + N + AA   GVKRF
Sbjct: 73  LRVMENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRF 132

Query: 162 VYISAA 167
            Y S+A
Sbjct: 133 FYASSA 138

Length = 370

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 41.9 bits (99), Expect = 8e-05
 Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 16/113 (14%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+L++GG  F+G  +  E L  G  V   +R GR+         V    G+    D+ +E
Sbjct: 2   KILIIGGTRFIGKALVEELLAAGHDVTVFNR-GRTKPDLP--EGVEHIVGDRNDRDALEE 58

Query: 118 ALDGVT--AVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAAD 168
            L G     V+  +         Y       +     A +  VK++++IS+A 
Sbjct: 59  LLGGEDFDVVVDTIA--------YT---PRQVERALDAFKGRVKQYIFISSAS 100

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187577 cd05267, SDR_a6, atypical (a) SDRs, subgroup 6

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 18/141 (12%)

Query: 58  KLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR--DSWANNVIWHQGNLLSSD 113
           K+L+LG NG     I REA    L  +   L+   R++ R     +  V   +G+ L+SD
Sbjct: 2   KVLILGANG----EIAREATTMLLENSNVELTLFLRNAHRLLHLKSARVTVVEGDALNSD 57

Query: 114 SWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVAN 173
             K A+ G   V + +GG                N ++A    GVKR ++ ++   G+ +
Sbjct: 58  DLKAAMRGQDVVYANLGGTDL--------DQQAENVVQAMKAVGVKRLIWTTS--LGIYD 107

Query: 174 YLLQGYYEGKRAAETELLTRY 194
            +   + E  +      L  Y
Sbjct: 108 EVPGKFGEWNKEFIGNYLAPY 128

These atypical SDR family members of unknown function have only a partial match to a prototypical glycine-rich NAD(P)-binding motif consensus, GXXG, which conserves part of the motif of extended SDR. Furthermore, they lack the characteristic active site residues of the SDRs. This subgroup is related to phenylcoumaran benzylic ether reductase, an NADPH-dependent aromatic alcohol reductase. One member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|181609 PRK09009, PRK09009, C factor cell-cell signaling protein; Provisional

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 4/76 (5%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK- 116
            +L++GG+G +G  + ++ L+R    A++  + R    D   +NV WH  ++      K 
Sbjct: 2   NILIVGGSGGIGKAMVKQLLER-YPDATVHATYRHHKPDFQHDNVQWHALDVTDEAEIKQ 60

Query: 117 --EALDGVTAVISCVG 130
             E    +  +I+CVG
Sbjct: 61  LSEQFTQLDWLINCVG 76

Length = 235

>gnl|CDD|234294 TIGR03649, ergot_EASG, ergot alkaloid biosynthesis protein, AFUA_2G17970 family

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 37/139 (26%), Positives = 48/139 (34%), Gaps = 21/139 (15%)

Query: 59  LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-------SWANNVIWHQGNLLS 111
           +L+ GG G   S I R      +     SRS  SS           W +   W   N  S
Sbjct: 2   ILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAGPNEKHVKFDWLDEDTWD--NPFS 59

Query: 112 SDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADF-- 169
           SD      DG+   IS V                 I  I  A  KGV+RFV +SA+    
Sbjct: 60  SD------DGMEPEISAVYLVAPPIPDL---APPMIKFIDFARSKGVRRFVLLSASIIEK 110

Query: 170 -GVANYLLQGYYEGKRAAE 187
            G A   +  + +     E
Sbjct: 111 GGPAMGQVHAHLDSLGGVE 129

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. Length = 285

>gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 26/116 (22%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+L+ G NG +G+ + R AL     V +  R                 + ++   D+  E
Sbjct: 2   KILITGANGQLGTELRR-ALPGEFEVIATDR----------------AELDITDPDAVLE 44

Query: 118 ALDGV--TAVISC-----VGGFGSNSYM-YKINGTANINAIRAASEKGVKRFVYIS 165
            +       VI+      V    S   + + +N T   N  RAA+E G  R V+IS
Sbjct: 45  VIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHIS 99

Length = 281

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 38.8 bits (91), Expect = 8e-04
 Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 6/110 (5%)

Query: 59  LLVLGGNGFVGSHICREALDRGLTVASLSRSGR--SSLRDSWANNVIWHQGNLLSSDSWK 116
           +LV G  G +GS +    L+ G  V +L RS    ++L    A  V+   G+L       
Sbjct: 1   ILVTGATGRIGSKVATTLLEAGRPVRALVRSDERAAALAARGAEVVV---GDLDDPAVLA 57

Query: 117 EALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166
            AL GV AV        +          A   A  A  E GVKR V +S+
Sbjct: 58  AALAGVDAVFFLAPPAPTADARPGYVQAAEAFA-SALREAGVKRVVNLSS 106

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 38.1 bits (89), Expect = 0.001
 Identities = 36/166 (21%), Positives = 56/166 (33%), Gaps = 29/166 (17%)

Query: 58  KLLVLGGNGFVGSHICREALDR------GLTVASLSRSGRSSLRD----------SWANN 101
            +L+ G  GF+G+++  E LDR       L  A    +  + L              A+ 
Sbjct: 2   NVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADR 61

Query: 102 VIWHQGNL------LSSDSWKEALDGVTAVISC---VGGFGSNSYMYKINGTANINAIRA 152
           V    G+L      LS  +W+E  + V  +I     V      S +   N       +R 
Sbjct: 62  VEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRL 121

Query: 153 ASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGG 198
           A+    K   Y+S+   G   Y    Y       +    TR    G
Sbjct: 122 AATGKPKPLHYVSSISVGETEY----YSNFTVDFDEISPTRNVGQG 163

Length = 382

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 37.9 bits (89), Expect = 0.002
 Identities = 30/119 (25%), Positives = 44/119 (36%), Gaps = 30/119 (25%)

Query: 58  KLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           K+LV G  G VGS I R    RG   +   +        L             +L   ++
Sbjct: 1   KILVTGHRGLVGSAIVRVLARRGYENVVFRT-----SKEL-------------DLTDQEA 42

Query: 115 WKEALDGV--TAVISC---VGG-FGSNSY---MYKINGTANINAIRAASEKGVKRFVYI 164
            +   +      VI     VGG   + +Y     + N   N N I AA   GVK+ V++
Sbjct: 43  VRAFFEKEKPDYVIHLAAKVGGIVANMTYPADFLRDNLLINDNVIHAAHRFGVKKLVFL 101

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 37.6 bits (88), Expect = 0.002
 Identities = 32/131 (24%), Positives = 48/131 (36%), Gaps = 27/131 (20%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL 119
           L+ GG GF+G  + +    RG  V  L+RS        W     W       +    ++L
Sbjct: 2   LITGGTGFIGRALTQRLTKRGHEVTILTRSPPPGANTKWEGYKPW-------AGEDADSL 54

Query: 120 DGVTAVISCVG----------GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADF 169
           +G  AVI+  G                   +I+ T  +    AA+E+  K F+  SA   
Sbjct: 55  EGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRLLVEAIAAAEQKPKVFISASAV-- 112

Query: 170 GVANYLLQGYY 180
                   GYY
Sbjct: 113 --------GYY 115

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 37.5 bits (88), Expect = 0.002
 Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 29/130 (22%)

Query: 58  KLLVLGGNGFVGSHICREALDRG----------LTVASLSRSGRSSLRDSWAN-NVIWHQ 106
           K+LV GG GF+GS+  R  L++           LT A        +L D  ++    + +
Sbjct: 2   KILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYA----GNLENLEDVSSSPRYRFVK 57

Query: 107 GNLLSSDSWKEAL--DGVTAVISCVG------GFGSNSYMYKIN--GTANI-NAIRAASE 155
           G++  ++        + + AVI                   + N  GT  +  A R    
Sbjct: 58  GDICDAELVDRLFEEEKIDAVIHFAAESHVDRSISDPEPFIRTNVLGTYTLLEAARKY-- 115

Query: 156 KGVKRFVYIS 165
            GVKRFV+IS
Sbjct: 116 -GVKRFVHIS 124

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase

 Score = 37.3 bits (87), Expect = 0.003
 Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 21/127 (16%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLR------DSWANNVIWHQGNLL 110
           LV GG G++GSH   + L  G  V    +L  S   +LR          +N+++H+ +L 
Sbjct: 9   LVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLR 68

Query: 111 SSDSWKEALD--GVTAVI-----SCVGGFGSNSYMYKIN---GTANINAIRAASEKGVKR 160
             ++ ++        AVI       VG   +   +Y  N   GT  IN +   ++ G K+
Sbjct: 69  DKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGT--INLLEVMAKHGCKK 126

Query: 161 FVYISAA 167
            V+ S+A
Sbjct: 127 LVFSSSA 133

Length = 352

>gnl|CDD|224662 COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

 Score = 37.3 bits (87), Expect = 0.003
 Identities = 22/105 (20%), Positives = 39/105 (37%), Gaps = 16/105 (15%)

Query: 57  EKLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSD 113
            K+LV+G  G VGS +  +    G   +T+A  S+   + + +     V   Q +    D
Sbjct: 2   MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVD 60

Query: 114 SWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGV 158
           +    +     VI+    F        I        ++A  + GV
Sbjct: 61  ALVALIKDFDLVINAAPPF----VDLTI--------LKACIKTGV 93

Length = 389

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 37.3 bits (87), Expect = 0.003
 Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 19/122 (15%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLRDSWAN-NVIWHQGNLLSSDSW 115
           LV GG GF+GSH+    L+ G  V    +LS   R ++   + N    + + +LL +   
Sbjct: 3   LVTGGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFENKAFRFVKRDLLDTADK 62

Query: 116 KEALDGVTAVISCVGGFGSNSYM----------YKINGTANINAIRAASEKGVKRFVYIS 165
             A      V        +N  +           + N  A  N + A    GVKR V+ S
Sbjct: 63  V-AKKDGDTVFH----LAANPDVRLGATDPDIDLEENVLATYNVLEAMRANGVKRIVFAS 117

Query: 166 AA 167
           ++
Sbjct: 118 SS 119

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 37.3 bits (87), Expect = 0.003
 Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 24/134 (17%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWA----------NNVIWHQGNL 109
           LV G +GF+GSH+    + +G  V +          +SW           + +    G++
Sbjct: 2   LVTGADGFIGSHLVEALVRQGYEVRAFVLYNS---FNSWGWLDTSPPEVKDKIEVVTGDI 58

Query: 110 LSSDSWKEALDGVTAV------ISCVGGFGS-NSYM-YKINGTANINAIRAASEKGVKRF 161
              DS ++A+ G   V      I+    + + +SY+   + GT N+  ++AA + GV++ 
Sbjct: 59  RDPDSVRKAMKGCDVVFHLAALIAIPYSYIAPDSYVDTNVTGTLNV--LQAARDLGVEKV 116

Query: 162 VYISAAD-FGVANY 174
           V+ S ++ +G A Y
Sbjct: 117 VHTSTSEVYGTAQY 130

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	198
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.94
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.92
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.92
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.9
PLN00198	338	anthocyanidin reductase; Provisional	99.9
PLN02214	342	cinnamoyl-CoA reductase	99.9
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.9
PLN02572	442	UDP-sulfoquinovose synthase	99.9
PLN02427	386	UDP-apiose/xylose synthase	99.9
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.89
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.89
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.89
CHL00194	317	ycf39 Ycf39; Provisional	99.89
PLN02650	351	dihydroflavonol-4-reductase	99.89
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.88
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.88
PLN02653	340	GDP-mannose 4,6-dehydratase	99.88
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.88
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.88
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.87
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.87
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.87
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.87
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.87
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.87
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.86
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.86
PLN02240	352	UDP-glucose 4-epimerase	99.86
PLN02686	367	cinnamoyl-CoA reductase	99.86
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.86
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.86
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.86
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.85
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.85
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.85
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.85
PLN02583	297	cinnamoyl-CoA reductase	99.85
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.85
PLN02206	442	UDP-glucuronate decarboxylase	99.85
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.85
PLN02260	668	probable rhamnose biosynthetic enzyme	99.84
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.84
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.84
PRK06482	276	short chain dehydrogenase; Provisional	99.84
PRK06180	277	short chain dehydrogenase; Provisional	99.84
PRK06179	270	short chain dehydrogenase; Provisional	99.83
PRK05993	277	short chain dehydrogenase; Provisional	99.83
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.83
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.83
PRK06398	258	aldose dehydrogenase; Validated	99.82
PRK06194	287	hypothetical protein; Provisional	99.82
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.82
PRK05717	255	oxidoreductase; Validated	99.82
PLN02996	491	fatty acyl-CoA reductase	99.82
PLN03209	576	translocon at the inner envelope of chloroplast su	99.82
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.82
PRK07023	243	short chain dehydrogenase; Provisional	99.82
PRK07856	252	short chain dehydrogenase; Provisional	99.82
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.82
PLN02778	298	3,5-epimerase/4-reductase	99.81
PRK06182	273	short chain dehydrogenase; Validated	99.81
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
PRK07806	248	short chain dehydrogenase; Provisional	99.81
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.81
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.81
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.81
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.8
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.8
PRK08263	275	short chain dehydrogenase; Provisional	99.8
PRK07201	657	short chain dehydrogenase; Provisional	99.8
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.8
PRK07814	263	short chain dehydrogenase; Provisional	99.8
PRK07063	260	short chain dehydrogenase; Provisional	99.8
PRK09291	257	short chain dehydrogenase; Provisional	99.8
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.8
PRK06523	260	short chain dehydrogenase; Provisional	99.8
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.8
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.8
PRK05866	293	short chain dehydrogenase; Provisional	99.8
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.8
PLN02253	280	xanthoxin dehydrogenase	99.8
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.8
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.79
PRK07024	257	short chain dehydrogenase; Provisional	99.79
PRK07478	254	short chain dehydrogenase; Provisional	99.79
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.79
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.79
PRK06483	236	dihydromonapterin reductase; Provisional	99.79
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.79
PRK08267	260	short chain dehydrogenase; Provisional	99.79
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.79
PRK06197	306	short chain dehydrogenase; Provisional	99.79
PRK12937	245	short chain dehydrogenase; Provisional	99.79
PRK08264	238	short chain dehydrogenase; Validated	99.79
PRK06101	240	short chain dehydrogenase; Provisional	99.79
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.79
PRK10538	248	malonic semialdehyde reductase; Provisional	99.79
PRK07825	273	short chain dehydrogenase; Provisional	99.79
PRK09135	249	pteridine reductase; Provisional	99.79
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.79
PRK08278	273	short chain dehydrogenase; Provisional	99.78
PRK08265	261	short chain dehydrogenase; Provisional	99.78
PRK05875	276	short chain dehydrogenase; Provisional	99.78
PRK07067	257	sorbitol dehydrogenase; Provisional	99.78
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.78
PRK09134	258	short chain dehydrogenase; Provisional	99.78
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.78
PRK08339	263	short chain dehydrogenase; Provisional	99.78
PRK12827	249	short chain dehydrogenase; Provisional	99.78
PRK07775	274	short chain dehydrogenase; Provisional	99.78
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.78
PRK07454	241	short chain dehydrogenase; Provisional	99.78
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.78
PRK06138	252	short chain dehydrogenase; Provisional	99.78
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
PRK05876	275	short chain dehydrogenase; Provisional	99.78
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.78
PRK07774	250	short chain dehydrogenase; Provisional	99.78
PRK06841	255	short chain dehydrogenase; Provisional	99.78
PRK06128	300	oxidoreductase; Provisional	99.78
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.78
PRK06914	280	short chain dehydrogenase; Provisional	99.78
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.78
PRK07890	258	short chain dehydrogenase; Provisional	99.77
PRK08628	258	short chain dehydrogenase; Provisional	99.77
PRK07102	243	short chain dehydrogenase; Provisional	99.77
PRK05693	274	short chain dehydrogenase; Provisional	99.77
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.77
PRK12367	245	short chain dehydrogenase; Provisional	99.77
PRK12746	254	short chain dehydrogenase; Provisional	99.77
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.77
PRK07060	245	short chain dehydrogenase; Provisional	99.77
PRK08251	248	short chain dehydrogenase; Provisional	99.77
PRK12747	252	short chain dehydrogenase; Provisional	99.77
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
PRK06500	249	short chain dehydrogenase; Provisional	99.77
PRK08589	272	short chain dehydrogenase; Validated	99.77
PRK07904	253	short chain dehydrogenase; Provisional	99.77
PRK06114	254	short chain dehydrogenase; Provisional	99.77
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.77
PRK08643	256	acetoin reductase; Validated	99.77
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.77
PRK07035	252	short chain dehydrogenase; Provisional	99.77
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.77
PRK06196	315	oxidoreductase; Provisional	99.77
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.76
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.76
PRK05854	313	short chain dehydrogenase; Provisional	99.76
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.76
PRK12742	237	oxidoreductase; Provisional	99.76
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.76
PRK12743	256	oxidoreductase; Provisional	99.76
PRK12939	250	short chain dehydrogenase; Provisional	99.76
PRK09242	257	tropinone reductase; Provisional	99.76
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.76
PRK12828	239	short chain dehydrogenase; Provisional	99.76
PRK05650	270	short chain dehydrogenase; Provisional	99.76
PRK06057	255	short chain dehydrogenase; Provisional	99.76
PRK07109	334	short chain dehydrogenase; Provisional	99.76
PRK08177	225	short chain dehydrogenase; Provisional	99.76
PRK06181	263	short chain dehydrogenase; Provisional	99.76
PRK09186	256	flagellin modification protein A; Provisional	99.76
PRK07985	294	oxidoreductase; Provisional	99.76
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.76
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.76
PRK07577	234	short chain dehydrogenase; Provisional	99.76
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.75
PRK06139	330	short chain dehydrogenase; Provisional	99.75
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.75
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.75
PRK06172	253	short chain dehydrogenase; Provisional	99.75
PRK07326	237	short chain dehydrogenase; Provisional	99.75
PRK05872	296	short chain dehydrogenase; Provisional	99.75
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.75
PRK07677	252	short chain dehydrogenase; Provisional	99.75
PRK05884	223	short chain dehydrogenase; Provisional	99.75
PRK12829	264	short chain dehydrogenase; Provisional	99.75
PRK08219	227	short chain dehydrogenase; Provisional	99.75
PRK07576	264	short chain dehydrogenase; Provisional	99.75
PRK06924	251	short chain dehydrogenase; Provisional	99.75
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.75
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.75
PRK05867	253	short chain dehydrogenase; Provisional	99.75
PRK06701	290	short chain dehydrogenase; Provisional	99.75
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.75
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.75
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.74
PRK07062	265	short chain dehydrogenase; Provisional	99.74
PRK12744	257	short chain dehydrogenase; Provisional	99.74
PRK05865	854	hypothetical protein; Provisional	99.74
PRK06484	520	short chain dehydrogenase; Validated	99.74
PLN02260	668	probable rhamnose biosynthetic enzyme	99.74
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.74
PRK08226	263	short chain dehydrogenase; Provisional	99.74
PRK06949	258	short chain dehydrogenase; Provisional	99.74
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.74
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.74
PRK07041	230	short chain dehydrogenase; Provisional	99.73
PRK09072	263	short chain dehydrogenase; Provisional	99.73
PRK07791	286	short chain dehydrogenase; Provisional	99.73
PRK07074	257	short chain dehydrogenase; Provisional	99.73
PRK07069	251	short chain dehydrogenase; Validated	99.73
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.73
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.72
PLN02503	605	fatty acyl-CoA reductase 2	99.72
PRK08017	256	oxidoreductase; Provisional	99.72
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.72
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.72
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.72
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.72
PRK06123	248	short chain dehydrogenase; Provisional	99.72
PRK07831	262	short chain dehydrogenase; Provisional	99.72
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.72
PRK05855	582	short chain dehydrogenase; Validated	99.72
PRK06125	259	short chain dehydrogenase; Provisional	99.72
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.71
PRK08703	239	short chain dehydrogenase; Provisional	99.71
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.71
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
PRK07201	657	short chain dehydrogenase; Provisional	99.71
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.71
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
PRK06953	222	short chain dehydrogenase; Provisional	99.71
PRK07578	199	short chain dehydrogenase; Provisional	99.71
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.71
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.71
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.7
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.7
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.7
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.7
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.7
PRK06198	260	short chain dehydrogenase; Provisional	99.7
PRK07832	272	short chain dehydrogenase; Provisional	99.7
PLN00016	378	RNA-binding protein; Provisional	99.7
PRK06484	520	short chain dehydrogenase; Validated	99.69
PRK08324	681	short chain dehydrogenase; Validated	99.69
PLN02780	320	ketoreductase/ oxidoreductase	99.68
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.68
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.68
PRK06940	275	short chain dehydrogenase; Provisional	99.68
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.68
PRK05599	246	hypothetical protein; Provisional	99.67
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.67
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.67
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.67
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.67
PRK08303	305	short chain dehydrogenase; Provisional	99.66
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.66
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.66
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.66
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.65
PRK12320	699	hypothetical protein; Provisional	99.65
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.65
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.64
PRK08862	227	short chain dehydrogenase; Provisional	99.64
KOG1208	314	consensus Dehydrogenases with different specificit	99.63
KOG0725	270	consensus Reductases with broad range of substrate	99.63
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.62
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.61
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.61
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.61
COG1028	251	FabG Dehydrogenases with different specificities (	99.6
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.6
PLN00015	308	protochlorophyllide reductase	99.59
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.59
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.59
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.59
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.58
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.58
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.54
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.54
COG2910	211	Putative NADH-flavin reductase [General function p	99.53
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.51
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.51
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.47
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.46
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.46
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.44
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.44
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.41
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.4
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.39
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.39
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.32
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.3
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.24
PRK06720	169	hypothetical protein; Provisional	99.23
PRK08309	177	short chain dehydrogenase; Provisional	99.15
PTZ00325	321	malate dehydrogenase; Provisional	99.12
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.12
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	99.02
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.01
PLN00106	323	malate dehydrogenase	98.98
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.97
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.92
PRK09620	229	hypothetical protein; Provisional	98.79
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.78
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.77
KOG2774	366	consensus NAD dependent epimerase [General functio	98.75
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.73
PRK05086	312	malate dehydrogenase; Provisional	98.68
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.62
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.59
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.57
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.52
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.45
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.44
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.34
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.29
COG3268	382	Uncharacterized conserved protein [Function unknow	98.27
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.27
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.22
PRK14982	340	acyl-ACP reductase; Provisional	98.2
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	98.18
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.17
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	98.09
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.08
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	98.06
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.02
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.96
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.94
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.94
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.91
PRK09496	453	trkA potassium transporter peripheral membrane com	97.9
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.9
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.89
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.88
PRK05442	326	malate dehydrogenase; Provisional	97.88
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.83
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.81
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.78
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.76
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.74
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.73
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.69
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.68
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.68
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.66
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.65
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	97.64
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.64
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.58
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.58
PRK09496	453	trkA potassium transporter peripheral membrane com	97.58
PTZ00117	319	malate dehydrogenase; Provisional	97.54
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.54
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.5
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.48
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.46
PLN02383	344	aspartate semialdehyde dehydrogenase	97.44
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.43
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.4
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.39
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.33
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.3
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.29
PRK06223	307	malate dehydrogenase; Reviewed	97.29
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	97.27
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.26
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.24
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.23
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.22
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.21
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	97.2
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.2
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.17
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.17
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.16
PRK03659	601	glutathione-regulated potassium-efflux system prot	97.16
PRK04148	134	hypothetical protein; Provisional	97.16
PRK10669	558	putative cation:proton antiport protein; Provision	97.13
PLN02602	350	lactate dehydrogenase	97.09
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.07
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.07
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	97.07
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	97.06
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	97.05
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.04
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.03
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.03
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	97.02
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.98
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	96.98
PRK08655	437	prephenate dehydrogenase; Provisional	96.96
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.95
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	96.95
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.95
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	96.95
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.95
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.95
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.95
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.93
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.93
PRK10537	393	voltage-gated potassium channel; Provisional	96.92
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.91
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.91
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	96.91
PRK08223	287	hypothetical protein; Validated	96.89
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.87
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.87
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.86
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.86
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.86
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.84
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.83
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.83
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.82
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.8
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.79
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.78
PRK06849	389	hypothetical protein; Provisional	96.78
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.77
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.77
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.74
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.74
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	96.71
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.7
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.69
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.68
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	96.68
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.67
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.67
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.66
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.64
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.64
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.62
PRK08328	231	hypothetical protein; Provisional	96.61
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.61
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.61
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	96.61
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.6
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.6
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.6
PRK02705	459	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.59
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.57
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	96.55
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.53
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.52
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	96.51
PLN02948	577	phosphoribosylaminoimidazole carboxylase	96.49
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.49
PLN02928	347	oxidoreductase family protein	96.49
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.46
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.45
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.45
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.44
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	96.43
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.42
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.42
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.41
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.41
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.41
PRK14851	679	hypothetical protein; Provisional	96.4
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.4
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.4
PTZ00075	476	Adenosylhomocysteinase; Provisional	96.39
PLN02353	473	probable UDP-glucose 6-dehydrogenase	96.39
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.39
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.39
PLN00203	519	glutamyl-tRNA reductase	96.37
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	96.36
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.36
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.35
PLN02586	360	probable cinnamyl alcohol dehydrogenase	96.31
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	96.29
TIGR01161	352	purK phosphoribosylaminoimidazole carboxylase, Pur	96.26
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.25
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.25
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	96.24
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.24
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	96.24
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	96.24
PLN02256	304	arogenate dehydrogenase	96.22
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.2
PRK14852	989	hypothetical protein; Provisional	96.19
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.19
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	96.18
PRK00421	461	murC UDP-N-acetylmuramate--L-alanine ligase; Provi	96.18
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.17
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	96.16
PRK12409	410	D-amino acid dehydrogenase small subunit; Provisio	96.16
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.15
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.14
PRK07877	722	hypothetical protein; Provisional	96.14
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.1
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.09
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	96.09
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.08
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.08
PRK06487	317	glycerate dehydrogenase; Provisional	96.07
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.06
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	96.06
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	96.05
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	96.05
TIGR00036	266	dapB dihydrodipicolinate reductase.	96.04

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.94  E-value=3.4e-26  Score=179.70  Aligned_cols=139  Identities=25%  Similarity=0.354  Sum_probs=117.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEccccC--
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGF--  132 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~--  132 (198)
                      |+||||||+|+||++.+.+|++.|++|++++.-..............++.+|+.|.+.++++|+  ++|+|||+||..  
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~V   80 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISV   80 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccccc
Confidence            5899999999999999999999999999999754332222111116899999999999999997  589999999943  


Q ss_pred             ----CCCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC----------CCCcchHHHHHHHHHHHHHhhCC
Q 029125          133 ----GSNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYLLQGYYEGKRAAETELLTRYP  195 (198)
Q Consensus       133 ----~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~----------~~~~~~Y~~sK~~~e~~l~~~~~  195 (198)
                          ..+-+.|+-|+.|+++++++|++.++++|||.|| ++||.+          ..|.++||.||++.|++++....
T Consensus        81 gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~  158 (329)
T COG1087          81 GESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAK  158 (329)
T ss_pred             chhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHH
Confidence                3567789999999999999999999999999999 778864          35678999999999999987643

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.92  E-value=7.5e-25  Score=175.85  Aligned_cols=136  Identities=35%  Similarity=0.463  Sum_probs=111.3

Q ss_pred             EEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCcccc-cC-CCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCCC-
Q 029125           60 LVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRD-SW-ANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS-  134 (198)
Q Consensus        60 lvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~~-~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~-  134 (198)
                      |||||+||||++|+++|+++|  ++|.++++.+...... .. .....++.+|++|++++.++++++|+|||+|++... 
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~   80 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW   80 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence            699999999999999999999  7999999876553311 11 223349999999999999999999999999986532 


Q ss_pred             ----CccceehhhHHHHHHHHHHHHcCCCEEEEeecc-ccCC----------------CCCCcchHHHHHHHHHHHHHhh
Q 029125          135 ----NSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGV----------------ANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       135 ----~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~-~~~~----------------~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                          .+..+++|+.|+.+++++|++.++++|||+||. +++.                +..+...|+.||+.+|+++.++
T Consensus        81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a  160 (280)
T PF01073_consen   81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEA  160 (280)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhh
Confidence                345789999999999999999999999999994 3332                0123458999999999999988


Q ss_pred             CC
Q 029125          194 YP  195 (198)
Q Consensus       194 ~~  195 (198)
                      ..
T Consensus       161 ~~  162 (280)
T PF01073_consen  161 NG  162 (280)
T ss_pred             cc
Confidence            54

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.92  E-value=5.7e-24  Score=175.76  Aligned_cols=141  Identities=21%  Similarity=0.183  Sum_probs=115.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc----------ccCCCCeEEEEccCCCHHHHHHHhcCCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----------DSWANNVIWHQGNLLSSDSWKEALDGVT  123 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----------~~~~~~~~~~~~D~~d~~~~~~~~~~~d  123 (198)
                      ..+|+|+||||+||||++|+++|+++|++|++++|.......          .....++.++.+|+.|.+.+..+++++|
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d   92 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD   92 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence            456899999999999999999999999999999986432110          0011357899999999999999999999


Q ss_pred             EEEEccccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC----------CCCcchHHHHHHHH
Q 029125          124 AVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYLLQGYYEGKRAA  186 (198)
Q Consensus       124 ~vi~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~----------~~~~~~Y~~sK~~~  186 (198)
                      +|||+|+...      ++...+++|+.|+.+++++|++.++++|||+|| .+|+..          ..|.++|+.+|.++
T Consensus        93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~  172 (348)
T PRK15181         93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVN  172 (348)
T ss_pred             EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHH
Confidence            9999998532      234568899999999999999999999999999 567642          13557899999999


Q ss_pred             HHHHHhhC
Q 029125          187 ETELLTRY  194 (198)
Q Consensus       187 e~~l~~~~  194 (198)
                      |.+++.+.
T Consensus       173 e~~~~~~~  180 (348)
T PRK15181        173 ELYADVFA  180 (348)
T ss_pred             HHHHHHHH
Confidence            99988653

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.90  E-value=2.7e-23  Score=166.67  Aligned_cols=141  Identities=24%  Similarity=0.289  Sum_probs=115.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-------ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-------~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      .+++|+||||+||||++|+++|+++||.|..+.|++.+...       .....++..+.+|++|++++..+++++|+|||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH   84 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH   84 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence            56899999999999999999999999999999999876211       11134689999999999999999999999999


Q ss_pred             ccccCCCC-----ccceehhhHHHHHHHHHHHHcC-CCEEEEeeccc--cCC-CCC-------------------CcchH
Q 029125          128 CVGGFGSN-----SYMYKINGTANINAIRAASEKG-VKRFVYISAAD--FGV-ANY-------------------LLQGY  179 (198)
Q Consensus       128 ~ag~~~~~-----~~~~~~n~~~~~~~~~a~~~~~-~~~~v~~Ss~~--~~~-~~~-------------------~~~~Y  179 (198)
                      +|.++..+     .+..++.+.|++|++++|++.. ++||||+||..  ... +..                   ....|
T Consensus        85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y  164 (327)
T KOG1502|consen   85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWY  164 (327)
T ss_pred             eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHH
Confidence            99987543     2578899999999999999887 99999999942  211 100                   01479


Q ss_pred             HHHHHHHHHHHHhhCC
Q 029125          180 YEGKRAAETELLTRYP  195 (198)
Q Consensus       180 ~~sK~~~e~~l~~~~~  195 (198)
                      ..+|..+|+...+...
T Consensus       165 ~~sK~lAEkaAw~fa~  180 (327)
T KOG1502|consen  165 ALSKTLAEKAAWEFAK  180 (327)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999987776543

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.90  E-value=4.4e-23  Score=169.61  Aligned_cols=142  Identities=20%  Similarity=0.254  Sum_probs=113.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----c-cCCCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----D-SWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      .++++|+||||+||||++|+++|+++|++|+++.|+......     . ...++++++.+|++|.+++.++++++|+|||
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   86 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFH   86 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEE
Confidence            347899999999999999999999999999999887543210     0 1113588999999999999999999999999


Q ss_pred             ccccCCCC-----ccceehhhHHHHHHHHHHHHc-CCCEEEEeec-cccCCC-----------------------CCCcc
Q 029125          128 CVGGFGSN-----SYMYKINGTANINAIRAASEK-GVKRFVYISA-ADFGVA-----------------------NYLLQ  177 (198)
Q Consensus       128 ~ag~~~~~-----~~~~~~n~~~~~~~~~a~~~~-~~~~~v~~Ss-~~~~~~-----------------------~~~~~  177 (198)
                      +|+.....     ...+++|+.++.++++++.+. ++++|||+|| .+|+..                       .++.+
T Consensus        87 ~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~  166 (338)
T PLN00198         87 VATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTW  166 (338)
T ss_pred             eCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccc
Confidence            99864321     234689999999999999876 5889999999 556521                       12456


Q ss_pred             hHHHHHHHHHHHHHhhCC
Q 029125          178 GYYEGKRAAETELLTRYP  195 (198)
Q Consensus       178 ~Y~~sK~~~e~~l~~~~~  195 (198)
                      +|+.||.++|.+++.+..
T Consensus       167 ~Y~~sK~~~E~~~~~~~~  184 (338)
T PLN00198        167 GYPASKTLAEKAAWKFAE  184 (338)
T ss_pred             hhHHHHHHHHHHHHHHHH
Confidence            799999999999987643

>PLN02214 cinnamoyl-CoA reductase

Probab=99.90  E-value=4.6e-23  Score=170.00  Aligned_cols=141  Identities=26%  Similarity=0.298  Sum_probs=115.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc----ccc--CCCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL----RDS--WANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~----~~~--~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      .++++|+||||+||||++++++|+++|++|++++|+.+...    ...  ...+++++.+|++|.+.+.++++++|+|||
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   87 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH   87 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence            45789999999999999999999999999999999754311    010  113578899999999999999999999999


Q ss_pred             ccccCC-CCccceehhhHHHHHHHHHHHHcCCCEEEEeecc--ccCCCC-------------------CCcchHHHHHHH
Q 029125          128 CVGGFG-SNSYMYKINGTANINAIRAASEKGVKRFVYISAA--DFGVAN-------------------YLLQGYYEGKRA  185 (198)
Q Consensus       128 ~ag~~~-~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~--~~~~~~-------------------~~~~~Y~~sK~~  185 (198)
                      +|+... .+...+++|+.++.+++++|.+.++++|||+||.  .|+.+.                   .+.++|+.+|.+
T Consensus        88 ~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~  167 (342)
T PLN02214         88 TASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMV  167 (342)
T ss_pred             ecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHH
Confidence            999753 3466789999999999999999999999999983  565311                   134579999999


Q ss_pred             HHHHHHhhC
Q 029125          186 AETELLTRY  194 (198)
Q Consensus       186 ~e~~l~~~~  194 (198)
                      +|.+++.+.
T Consensus       168 aE~~~~~~~  176 (342)
T PLN02214        168 AEQAAWETA  176 (342)
T ss_pred             HHHHHHHHH
Confidence            999998764

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.90  E-value=1.1e-22  Score=169.38  Aligned_cols=144  Identities=22%  Similarity=0.239  Sum_probs=115.0

Q ss_pred             CCCCCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEc
Q 029125           49 VNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (198)
Q Consensus        49 ~~~~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~  128 (198)
                      ....+.++|+|+|||||||||+++++.|+++|++|++++|........ .....+++.+|++|.+.+..+++++|+|||+
T Consensus        14 ~~~~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~   92 (370)
T PLN02695         14 EPYWPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSE-DMFCHEFHLVDLRVMENCLKVTKGVDHVFNL   92 (370)
T ss_pred             CCCCCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccc-ccccceEEECCCCCHHHHHHHHhCCCEEEEc
Confidence            334556788999999999999999999999999999999864322111 1113578899999999999989999999999


Q ss_pred             cccCC-------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCC----------------CCCCcchHHHHHH
Q 029125          129 VGGFG-------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGV----------------ANYLLQGYYEGKR  184 (198)
Q Consensus       129 ag~~~-------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~----------------~~~~~~~Y~~sK~  184 (198)
                      |+...       .+...+..|+.++.+++++|++.++++|||+|| .+|+.                +..+.+.|+.+|.
T Consensus        93 Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~  172 (370)
T PLN02695         93 AADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL  172 (370)
T ss_pred             ccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHH
Confidence            97542       223456789999999999999999999999999 56653                1235568999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      ++|.+++.+
T Consensus       173 ~~E~~~~~~  181 (370)
T PLN02695        173 ATEELCKHY  181 (370)
T ss_pred             HHHHHHHHH
Confidence            999998775

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.90  E-value=7.9e-23  Score=173.72  Aligned_cols=144  Identities=17%  Similarity=0.215  Sum_probs=111.9

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc----------------------ccCCCCeEEEEccC
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----------------------DSWANNVIWHQGNL  109 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----------------------~~~~~~~~~~~~D~  109 (198)
                      ...++|+|+||||+||||++|+++|+++|++|++++|.......                      .....+++++.+|+
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl  122 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI  122 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence            34567899999999999999999999999999998753211000                      00013688999999


Q ss_pred             CCHHHHHHHhc--CCCEEEEccccCCCC---------ccceehhhHHHHHHHHHHHHcCCC-EEEEeec-cccCCC----
Q 029125          110 LSSDSWKEALD--GVTAVISCVGGFGSN---------SYMYKINGTANINAIRAASEKGVK-RFVYISA-ADFGVA----  172 (198)
Q Consensus       110 ~d~~~~~~~~~--~~d~vi~~ag~~~~~---------~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~Ss-~~~~~~----  172 (198)
                      +|.+.+.++++  ++|+|||+|+.....         ...+++|+.|+.+++++|++.+++ +||++|| .+||..    
T Consensus       123 ~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~~~  202 (442)
T PLN02572        123 CDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNIDI  202 (442)
T ss_pred             CCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCCCC
Confidence            99999999998  489999999753211         233578999999999999998885 8999999 667642    


Q ss_pred             -------------------CCCcchHHHHHHHHHHHHHhhCC
Q 029125          173 -------------------NYLLQGYYEGKRAAETELLTRYP  195 (198)
Q Consensus       173 -------------------~~~~~~Y~~sK~~~e~~l~~~~~  195 (198)
                                         ..+.++|+.+|.++|.+++.+..
T Consensus       203 ~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~  244 (442)
T PLN02572        203 EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCK  244 (442)
T ss_pred             cccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHH
Confidence                               12346899999999999987643

>PLN02427 UDP-apiose/xylose synthase

Probab=99.90  E-value=7.2e-23  Score=171.31  Aligned_cols=141  Identities=17%  Similarity=0.253  Sum_probs=111.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHC-CCeEEEeecCCCCccc--c----cCCCCeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLR--D----SWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~r~~~~~~~--~----~~~~~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      +.++|+|+|||||||||++|+++|+++ |++|++++|+..+...  .    .+..+++++.+|+.|.+.+.++++++|+|
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~V   90 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLT   90 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEE
Confidence            345679999999999999999999998 5999999986433111  0    12246899999999999999999999999


Q ss_pred             EEccccCCC------CccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC-------------------------
Q 029125          126 ISCVGGFGS------NSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN-------------------------  173 (198)
Q Consensus       126 i~~ag~~~~------~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~-------------------------  173 (198)
                      ||+|+....      +...+..|+.++.+++++|++.+ ++|||+|| .+||...                         
T Consensus        91 iHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~  169 (386)
T PLN02427         91 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESP  169 (386)
T ss_pred             EEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccc
Confidence            999985321      12345689999999999998877 79999999 5676320                         


Q ss_pred             -------CCcchHHHHHHHHHHHHHhhC
Q 029125          174 -------YLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       174 -------~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                             .+.+.|+.+|.++|.+++.+.
T Consensus       170 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  197 (386)
T PLN02427        170 CIFGSIEKQRWSYACAKQLIERLIYAEG  197 (386)
T ss_pred             cccCCCCccccchHHHHHHHHHHHHHHH
Confidence                   112479999999999998754

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.89  E-value=9.8e-23  Score=167.93  Aligned_cols=138  Identities=20%  Similarity=0.245  Sum_probs=110.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc----cccc-------CCCCeEEEEccCCCHHHHHHHhcC--CC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS----LRDS-------WANNVIWHQGNLLSSDSWKEALDG--VT  123 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~----~~~~-------~~~~~~~~~~D~~d~~~~~~~~~~--~d  123 (198)
                      |+|+||||+||||++|+++|+++|++|++++|+....    ....       ...+++++.+|++|.+.+.+++++  +|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            5899999999999999999999999999999875321    1100       023588999999999999999984  69


Q ss_pred             EEEEccccCCC------CccceehhhHHHHHHHHHHHHcCCC---EEEEeec-cccCCC----------CCCcchHHHHH
Q 029125          124 AVISCVGGFGS------NSYMYKINGTANINAIRAASEKGVK---RFVYISA-ADFGVA----------NYLLQGYYEGK  183 (198)
Q Consensus       124 ~vi~~ag~~~~------~~~~~~~n~~~~~~~~~a~~~~~~~---~~v~~Ss-~~~~~~----------~~~~~~Y~~sK  183 (198)
                      +|||+|+....      ....+++|+.|+.+++++|.+.+++   +|||+|| .+||..          ..+.++|+.||
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK  160 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAK  160 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHH
Confidence            99999996431      2344578899999999999987753   8999999 567642          23567999999


Q ss_pred             HHHHHHHHhhC
Q 029125          184 RAAETELLTRY  194 (198)
Q Consensus       184 ~~~e~~l~~~~  194 (198)
                      .++|.+++.+.
T Consensus       161 ~~~e~~~~~~~  171 (343)
T TIGR01472       161 LYAHWITVNYR  171 (343)
T ss_pred             HHHHHHHHHHH
Confidence            99999997753

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.89  E-value=2.1e-22  Score=166.17  Aligned_cols=138  Identities=17%  Similarity=0.247  Sum_probs=109.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHC-CCeEEEeecCCCCcccccCCCCeEEEEccCC-CHHHHHHHhcCCCEEEEccccCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLL-SSDSWKEALDGVTAVISCVGGFG  133 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~-d~~~~~~~~~~~d~vi~~ag~~~  133 (198)
                      ||+|+||||+||||++|+++|+++ |++|++++|+...........+++++.+|++ +.+.+.++++++|+|||+|+...
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~   80 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIAT   80 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCC
Confidence            478999999999999999999987 6999999986532111111246899999997 77788888999999999998532


Q ss_pred             ------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC-----------------CCcchHHHHHHHHHHH
Q 029125          134 ------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN-----------------YLLQGYYEGKRAAETE  189 (198)
Q Consensus       134 ------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~-----------------~~~~~Y~~sK~~~e~~  189 (198)
                            ++...+++|+.++++++++|++.+ ++|||+|| .+||...                 .+.+.|+.+|.++|++
T Consensus        81 ~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~  159 (347)
T PRK11908         81 PATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRV  159 (347)
T ss_pred             hHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHH
Confidence                  334567899999999999999887 79999999 5666311                 1234799999999999


Q ss_pred             HHhhC
Q 029125          190 LLTRY  194 (198)
Q Consensus       190 l~~~~  194 (198)
                      ++.+.
T Consensus       160 ~~~~~  164 (347)
T PRK11908        160 IWAYG  164 (347)
T ss_pred             HHHHH
Confidence            98753

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.89  E-value=1.9e-22  Score=164.55  Aligned_cols=140  Identities=21%  Similarity=0.261  Sum_probs=111.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc--cc-----cCCCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RD-----SWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~--~~-----~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      ++++|+||||+||||++++++|+++|++|++++|+.....  ..     ....+++++.+|++|++.+..+++++|+|||
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih   82 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH   82 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence            4579999999999999999999999999999998754311  00     0124688999999999999999999999999


Q ss_pred             ccccCC----CC-ccceehhhHHHHHHHHHHHHc-CCCEEEEeecc---ccCCCC-------------CC------cchH
Q 029125          128 CVGGFG----SN-SYMYKINGTANINAIRAASEK-GVKRFVYISAA---DFGVAN-------------YL------LQGY  179 (198)
Q Consensus       128 ~ag~~~----~~-~~~~~~n~~~~~~~~~a~~~~-~~~~~v~~Ss~---~~~~~~-------------~~------~~~Y  179 (198)
                      +|+...    .+ ...+++|+.++.++++++.+. ++++|||+||.   .|+...             .+      .+.|
T Consensus        83 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y  162 (322)
T PLN02662         83 TASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWY  162 (322)
T ss_pred             eCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchH
Confidence            998643    22 256789999999999999887 88999999994   254211             01      2479


Q ss_pred             HHHHHHHHHHHHhhC
Q 029125          180 YEGKRAAETELLTRY  194 (198)
Q Consensus       180 ~~sK~~~e~~l~~~~  194 (198)
                      +.+|..+|.+++.+.
T Consensus       163 ~~sK~~~E~~~~~~~  177 (322)
T PLN02662        163 VLSKTLAEEAAWKFA  177 (322)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999987653

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.89  E-value=4e-22  Score=162.76  Aligned_cols=134  Identities=26%  Similarity=0.318  Sum_probs=111.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCC-CC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG-SN  135 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~-~~  135 (198)
                      |+|+|||||||+|++++++|+++|++|++++|+..+.. .....+++++.+|++|++++.++++++|+|||+++... ..
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~-~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~   79 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS-FLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDL   79 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh-hHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCc
Confidence            48999999999999999999999999999999854321 11134789999999999999999999999999987432 33


Q ss_pred             ccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          136 SYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       136 ~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ...+++|+.++.+++++|++.+++|||++||..  ....+..+|..+|..+|++++++
T Consensus        80 ~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~--~~~~~~~~~~~~K~~~e~~l~~~  135 (317)
T CHL00194         80 YNAKQIDWDGKLALIEAAKAAKIKRFIFFSILN--AEQYPYIPLMKLKSDIEQKLKKS  135 (317)
T ss_pred             cchhhhhHHHHHHHHHHHHHcCCCEEEEecccc--ccccCCChHHHHHHHHHHHHHHc
Confidence            456789999999999999999999999999842  12234467999999999998865

>PLN02650 dihydroflavonol-4-reductase

Probab=99.89  E-value=5.1e-22  Score=164.15  Aligned_cols=140  Identities=22%  Similarity=0.314  Sum_probs=111.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--c-----cCCCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D-----SWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~-----~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      ..++||||||+||||++++++|+++|++|++++|+......  .     ....++.++.+|++|.+.+.++++++|+|||
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH   83 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH   83 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence            45789999999999999999999999999999987543211  0     0112578999999999999999999999999


Q ss_pred             ccccCCC----C-ccceehhhHHHHHHHHHHHHcC-CCEEEEeecc-ccCCC--------C-------------CCcchH
Q 029125          128 CVGGFGS----N-SYMYKINGTANINAIRAASEKG-VKRFVYISAA-DFGVA--------N-------------YLLQGY  179 (198)
Q Consensus       128 ~ag~~~~----~-~~~~~~n~~~~~~~~~a~~~~~-~~~~v~~Ss~-~~~~~--------~-------------~~~~~Y  179 (198)
                      +|+....    + ...+++|+.++.+++++|.+.+ +++|||+||. .|+..        .             .+.++|
T Consensus        84 ~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  163 (351)
T PLN02650         84 VATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMY  163 (351)
T ss_pred             eCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchH
Confidence            9985421    1 2567899999999999999876 7899999994 44321        0             122479


Q ss_pred             HHHHHHHHHHHHhhC
Q 029125          180 YEGKRAAETELLTRY  194 (198)
Q Consensus       180 ~~sK~~~e~~l~~~~  194 (198)
                      +.||.++|.+++.+.
T Consensus       164 ~~sK~~~E~~~~~~~  178 (351)
T PLN02650        164 FVSKTLAEKAAWKYA  178 (351)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999998764

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.88  E-value=4.9e-22  Score=162.37  Aligned_cols=140  Identities=21%  Similarity=0.245  Sum_probs=111.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--c-----cCCCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D-----SWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~-----~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      ++++|+||||+||||++++++|+++|++|+++.|+......  .     ....+++++.+|++|.+.+.++++++|+|||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   83 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH   83 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence            46899999999999999999999999999999987653211  0     0124689999999999999999999999999


Q ss_pred             ccccCC----CC-ccceehhhHHHHHHHHHHHHc-CCCEEEEeecc-c--cCCCC-------------------CCcchH
Q 029125          128 CVGGFG----SN-SYMYKINGTANINAIRAASEK-GVKRFVYISAA-D--FGVAN-------------------YLLQGY  179 (198)
Q Consensus       128 ~ag~~~----~~-~~~~~~n~~~~~~~~~a~~~~-~~~~~v~~Ss~-~--~~~~~-------------------~~~~~Y  179 (198)
                      +|+...    ++ ...+++|+.++.++++++++. +++|||++||. .  |+.+.                   .+.+.|
T Consensus        84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y  163 (322)
T PLN02986         84 TASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWY  163 (322)
T ss_pred             eCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccch
Confidence            998642    11 235789999999999999885 68999999994 3  33211                   124679


Q ss_pred             HHHHHHHHHHHHhhC
Q 029125          180 YEGKRAAETELLTRY  194 (198)
Q Consensus       180 ~~sK~~~e~~l~~~~  194 (198)
                      +.+|..+|.+++++.
T Consensus       164 ~~sK~~aE~~~~~~~  178 (322)
T PLN02986        164 PLSKILAENAAWEFA  178 (322)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999888764

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.88  E-value=6.9e-22  Score=161.90  Aligned_cols=136  Identities=22%  Similarity=0.240  Sum_probs=111.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCcc--c-ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSL--R-DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~--~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      ++|+|+||||+||||++++++|+++|  ++|++++|+.....  . .....++.++.+|++|.+.+.++++++|+|||+|
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A   82 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA   82 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence            46899999999999999999999986  78999998754321  0 1112468899999999999999999999999999


Q ss_pred             ccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          130 GGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       130 g~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      |...      ++...+++|+.|+.++++++.+.++++||++||..   +..|.++|+.+|+++|.+++.+
T Consensus        83 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~---~~~p~~~Y~~sK~~~E~l~~~~  149 (324)
T TIGR03589        83 ALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDK---AANPINLYGATKLASDKLFVAA  149 (324)
T ss_pred             ccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCC---CCCCCCHHHHHHHHHHHHHHHH
Confidence            8532      12356789999999999999999999999999942   3345678999999999998764

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.88  E-value=6.8e-22  Score=162.69  Aligned_cols=141  Identities=20%  Similarity=0.228  Sum_probs=112.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC----ccccc------CCCCeEEEEccCCCHHHHHHHhcC--
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS----SLRDS------WANNVIWHQGNLLSSDSWKEALDG--  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~----~~~~~------~~~~~~~~~~D~~d~~~~~~~~~~--  121 (198)
                      .++++|+||||+||||++++++|+++|++|++++|+...    ..+..      ...++.++.+|++|.+.+.+++++  
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   83 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK   83 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence            456899999999999999999999999999999987532    11110      123588999999999999998874  


Q ss_pred             CCEEEEccccCC------CCccceehhhHHHHHHHHHHHHcCCC-----EEEEeec-cccCCCC---------CCcchHH
Q 029125          122 VTAVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVK-----RFVYISA-ADFGVAN---------YLLQGYY  180 (198)
Q Consensus       122 ~d~vi~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~-----~~v~~Ss-~~~~~~~---------~~~~~Y~  180 (198)
                      +|+|||+|+...      .+...+++|+.++.++++++.+.+++     +||++|| .+||...         .+.+.|+
T Consensus        84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~  163 (340)
T PLN02653         84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYA  163 (340)
T ss_pred             CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhH
Confidence            799999998642      23445689999999999999988765     8999998 5677532         2467899


Q ss_pred             HHHHHHHHHHHhhC
Q 029125          181 EGKRAAETELLTRY  194 (198)
Q Consensus       181 ~sK~~~e~~l~~~~  194 (198)
                      .||.++|.+++.+.
T Consensus       164 ~sK~~~e~~~~~~~  177 (340)
T PLN02653        164 VAKVAAHWYTVNYR  177 (340)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999997753

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.88  E-value=4.7e-22  Score=155.93  Aligned_cols=142  Identities=22%  Similarity=0.226  Sum_probs=115.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCC---C-Ccc-cccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSG---R-SSL-RDSWANNVIWHQGNLLSSDSWKEALD--GVTAVIS  127 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~---~-~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~  127 (198)
                      |++|||||+||||+.+++.++++.  .+|++++.=.   . ... .....++..++++|+.|.+.+.++|+  .+|+|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            579999999999999999999985  4678877521   1 111 11224689999999999999999998  5999999


Q ss_pred             ccccCC------CCccceehhhHHHHHHHHHHHHcCCC-EEEEeec-cccCC------------CCCCcchHHHHHHHHH
Q 029125          128 CVGGFG------SNSYMYKINGTANINAIRAASEKGVK-RFVYISA-ADFGV------------ANYLLQGYYEGKRAAE  187 (198)
Q Consensus       128 ~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~Ss-~~~~~------------~~~~~~~Y~~sK~~~e  187 (198)
                      +|+-++      .+..+.++|+.|+.++++++++...+ ||+++|+ -+||.            +..|.+||++||++++
T Consensus        81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD  160 (340)
T COG1088          81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD  160 (340)
T ss_pred             echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence            998543      56788999999999999999998764 9999999 67764            3467899999999999


Q ss_pred             HHHHhhCCCCC
Q 029125          188 TELLTRYPYGG  198 (198)
Q Consensus       188 ~~l~~~~~~~g  198 (198)
                      .+++++...+|
T Consensus       161 ~lVray~~TYg  171 (340)
T COG1088         161 LLVRAYVRTYG  171 (340)
T ss_pred             HHHHHHHHHcC
Confidence            99999976544

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.88  E-value=7.3e-22  Score=163.39  Aligned_cols=142  Identities=20%  Similarity=0.258  Sum_probs=109.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--cc--CCCCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DS--WANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~--~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      ...++|+||||+||||++++++|+++|++|++++|+..+...  ..  ...+++++.+|+.|.+.+.++++++|+|||+|
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A   87 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA   87 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence            356799999999999999999999999999999987543211  00  12468899999999999999999999999999


Q ss_pred             ccCCC--------Cccc-----eehhhHHHHHHHHHHHHcC-CCEEEEeec-cccCCCC---------------------
Q 029125          130 GGFGS--------NSYM-----YKINGTANINAIRAASEKG-VKRFVYISA-ADFGVAN---------------------  173 (198)
Q Consensus       130 g~~~~--------~~~~-----~~~n~~~~~~~~~a~~~~~-~~~~v~~Ss-~~~~~~~---------------------  173 (198)
                      +....        ....     +++|+.++.+++++|.+.+ +++|||+|| .+|+...                     
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~  167 (353)
T PLN02896         88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVW  167 (353)
T ss_pred             ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhh
Confidence            86431        1122     2344689999999998875 789999999 6665210                     


Q ss_pred             ---CCcchHHHHHHHHHHHHHhhCC
Q 029125          174 ---YLLQGYYEGKRAAETELLTRYP  195 (198)
Q Consensus       174 ---~~~~~Y~~sK~~~e~~l~~~~~  195 (198)
                         ++.++|+.||.++|.+++.+..
T Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~  192 (353)
T PLN02896        168 NTKASGWVYVLSKLLTEEAAFKYAK  192 (353)
T ss_pred             ccCCCCccHHHHHHHHHHHHHHHHH
Confidence               1224899999999999987643

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.87  E-value=1.1e-21  Score=174.25  Aligned_cols=140  Identities=17%  Similarity=0.228  Sum_probs=110.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHC-CCeEEEeecCCCCcccccCCCCeEEEEccCCCHHH-HHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS-WKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~~~d~vi~~ag~  131 (198)
                      ..+|+|+||||+||||++|+++|+++ |++|++++|............+++++.+|++|.+. +.++++++|+|||+|+.
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~  392 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAI  392 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECccc
Confidence            45789999999999999999999986 79999999875432111122468999999998655 57788999999999985


Q ss_pred             CC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC-----------------CCcchHHHHHHHHH
Q 029125          132 FG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN-----------------YLLQGYYEGKRAAE  187 (198)
Q Consensus       132 ~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~-----------------~~~~~Y~~sK~~~e  187 (198)
                      ..      .+...+++|+.++.+++++|.+.+ ++|||+|| .+||...                 .+.+.|+.+|.++|
T Consensus       393 ~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E  471 (660)
T PRK08125        393 ATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLD  471 (660)
T ss_pred             cCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHH
Confidence            43      223467899999999999999987 79999999 5676311                 12347999999999


Q ss_pred             HHHHhhC
Q 029125          188 TELLTRY  194 (198)
Q Consensus       188 ~~l~~~~  194 (198)
                      .+++.+.
T Consensus       472 ~~~~~~~  478 (660)
T PRK08125        472 RVIWAYG  478 (660)
T ss_pred             HHHHHHH
Confidence            9998764

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.87  E-value=2e-21  Score=158.84  Aligned_cols=140  Identities=21%  Similarity=0.266  Sum_probs=110.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----c--cCCCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----D--SWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~--~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      .+|+|+||||+||||++++++|+++|++|++++|+......     .  ....+++++.+|++|.+.+.++++++|+|||
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   83 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH   83 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence            46899999999999999999999999999999887643211     0  0124688999999999999999999999999


Q ss_pred             ccccCC------CCccceehhhHHHHHHHHHHHHc-CCCEEEEeec-cccCCCC---------------C------Ccch
Q 029125          128 CVGGFG------SNSYMYKINGTANINAIRAASEK-GVKRFVYISA-ADFGVAN---------------Y------LLQG  178 (198)
Q Consensus       128 ~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~-~~~~~v~~Ss-~~~~~~~---------------~------~~~~  178 (198)
                      +||...      .+...+++|+.++.++++++.+. +.++||++|| .+|+.+.               .      +.++
T Consensus        84 ~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~  163 (325)
T PLN02989         84 TASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW  163 (325)
T ss_pred             eCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccc
Confidence            998532      22456789999999999999875 5789999999 3443211               0      1257


Q ss_pred             HHHHHHHHHHHHHhhC
Q 029125          179 YYEGKRAAETELLTRY  194 (198)
Q Consensus       179 Y~~sK~~~e~~l~~~~  194 (198)
                      |+.+|.++|.+++.+.
T Consensus       164 Y~~sK~~~E~~~~~~~  179 (325)
T PLN02989        164 YVLSKTLAEDAAWRFA  179 (325)
T ss_pred             hHHHHHHHHHHHHHHH
Confidence            9999999999988653

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.87  E-value=3.1e-21  Score=156.32  Aligned_cols=135  Identities=30%  Similarity=0.325  Sum_probs=110.7

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCC-CEEEEccccCCCC-
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGV-TAVISCVGGFGSN-  135 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-d~vi~~ag~~~~~-  135 (198)
                      +||||||+||||++|+++|+++|++|+.++|...+.....  .++.++.+|++|.+.+.+.+++. |+|||+|+....+ 
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~   79 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPD   79 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--cccceeeecccchHHHHHHHhcCCCEEEEccccCchhh
Confidence            4999999999999999999999999999999765533222  57889999999998888888888 9999999965422 


Q ss_pred             ------ccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC------------CCCcchHHHHHHHHHHHHHhhC
Q 029125          136 ------SYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA------------NYLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       136 ------~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~------------~~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                            ...+.+|+.++.+++++|++.++++|||.|| ..++..            ..+.++|+.+|+.+|.+++.+.
T Consensus        80 ~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~  157 (314)
T COG0451          80 SNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYA  157 (314)
T ss_pred             hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence                  1378999999999999999989999999777 334421            2233369999999999998764

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.87  E-value=7.9e-22  Score=156.81  Aligned_cols=135  Identities=24%  Similarity=0.224  Sum_probs=103.3

Q ss_pred             EEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCccc--cc-----CCCCeE----EEEccCCCHHHHHHHhc--CCCE
Q 029125           59 LLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLR--DS-----WANNVI----WHQGNLLSSDSWKEALD--GVTA  124 (198)
Q Consensus        59 vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~--~~-----~~~~~~----~~~~D~~d~~~~~~~~~--~~d~  124 (198)
                      ||||||+|.||+.|+++|++.+ .++++++|++.....  ..     ...++.    .+.+|+.|.+.+..+|+  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            7999999999999999999997 589999998654111  11     123443    45899999999999999  8999


Q ss_pred             EEEccccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhhCCC
Q 029125          125 VISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPY  196 (198)
Q Consensus       125 vi~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~~~~  196 (198)
                      |||.|+.-+      .+.+.+.+|+.|+.|++++|.++++++||++||   +....|.+.||+||..+|.++..+..+
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~IST---DKAv~PtnvmGatKrlaE~l~~~~~~~  155 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFIST---DKAVNPTNVMGATKRLAEKLVQAANQY  155 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEE---CGCSS--SHHHHHHHHHHHHHHHHCCT
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccc---cccCCCCcHHHHHHHHHHHHHHHHhhh
Confidence            999998532      456778999999999999999999999999999   555678899999999999999988654

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.87  E-value=2.1e-21  Score=157.37  Aligned_cols=124  Identities=21%  Similarity=0.215  Sum_probs=102.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEccccCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFGS  134 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~~~  134 (198)
                      |+||||||+||||++++++|+++| +|++++|...            .+.+|++|.+.+.++++  ++|+|||+|+....
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~   67 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAV   67 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------cccCCCCCHHHHHHHHHhcCCCEEEECCccCCc
Confidence            479999999999999999999999 7999987521            24579999999999988  58999999986532


Q ss_pred             ------CccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC----------CCCcchHHHHHHHHHHHHHhhC
Q 029125          135 ------NSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       135 ------~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~----------~~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                            ++..+.+|+.++.+++++|++.++ +|||+|| .+|+..          ..|.+.|+.+|+++|++++.+.
T Consensus        68 ~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~  143 (299)
T PRK09987         68 DKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEHC  143 (299)
T ss_pred             chhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhC
Confidence                  234467999999999999999886 7999999 566532          2356789999999999998764

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.87  E-value=3e-21  Score=159.50  Aligned_cols=139  Identities=21%  Similarity=0.193  Sum_probs=112.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc----cCCCCeEEEEccCCCHHHHHHHhcC--CCEEEEc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD----SWANNVIWHQGNLLSSDSWKEALDG--VTAVISC  128 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi~~  128 (198)
                      ++|+|+||||+||||+++++.|+++|++|++++|+.......    ....++.++.+|++|.+++.+++++  +|+|||+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~   82 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL   82 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence            468999999999999999999999999999999876532110    1123577899999999999999885  6999999


Q ss_pred             cccCC------CCccceehhhHHHHHHHHHHHHcC-CCEEEEeec-cccCCC-----------CCCcchHHHHHHHHHHH
Q 029125          129 VGGFG------SNSYMYKINGTANINAIRAASEKG-VKRFVYISA-ADFGVA-----------NYLLQGYYEGKRAAETE  189 (198)
Q Consensus       129 ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~-~~~~v~~Ss-~~~~~~-----------~~~~~~Y~~sK~~~e~~  189 (198)
                      ||...      ++...+++|+.++.++++++.+.+ +++||++|| .+|+.+           ..+.++|+.+|.+.|.+
T Consensus        83 A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~  162 (349)
T TIGR02622        83 AAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELV  162 (349)
T ss_pred             CcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHH
Confidence            98431      334567899999999999998876 789999999 556532           24467899999999998


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      ++.+
T Consensus       163 ~~~~  166 (349)
T TIGR02622       163 IASY  166 (349)
T ss_pred             HHHH
Confidence            8764

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.86  E-value=3.5e-21  Score=159.21  Aligned_cols=138  Identities=16%  Similarity=0.212  Sum_probs=106.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEE-eecCCCCc-cc---cc-CCCCeEEEEccCCCHHHHHHHhcC--CCEEEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVAS-LSRSGRSS-LR---DS-WANNVIWHQGNLLSSDSWKEALDG--VTAVIS  127 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~-l~r~~~~~-~~---~~-~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi~  127 (198)
                      |++|+||||+||||+++++.|+++|+++++ ++|..... ..   .. ...++.++.+|++|.+++.+++++  +|+|||
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih   80 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH   80 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence            478999999999999999999999987554 44432211 00   10 113578889999999999999984  899999


Q ss_pred             ccccCC------CCccceehhhHHHHHHHHHHHH---------cCCCEEEEeec-cccCC------------CCCCcchH
Q 029125          128 CVGGFG------SNSYMYKINGTANINAIRAASE---------KGVKRFVYISA-ADFGV------------ANYLLQGY  179 (198)
Q Consensus       128 ~ag~~~------~~~~~~~~n~~~~~~~~~a~~~---------~~~~~~v~~Ss-~~~~~------------~~~~~~~Y  179 (198)
                      +||...      .+...+++|+.++.+++++|.+         .++++||++|| .+|+.            +..+.+.|
T Consensus        81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y  160 (355)
T PRK10217         81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY  160 (355)
T ss_pred             CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChh
Confidence            998643      2356788999999999999976         24679999999 56663            22356789


Q ss_pred             HHHHHHHHHHHHhh
Q 029125          180 YEGKRAAETELLTR  193 (198)
Q Consensus       180 ~~sK~~~e~~l~~~  193 (198)
                      +.||.++|.+++.+
T Consensus       161 ~~sK~~~e~~~~~~  174 (355)
T PRK10217        161 SASKASSDHLVRAW  174 (355)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999998865

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.86  E-value=1.4e-21  Score=154.57  Aligned_cols=134  Identities=28%  Similarity=0.388  Sum_probs=93.6

Q ss_pred             EEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCcc--c-------------c---cCCCCeEEEEccCCCH------HH
Q 029125           61 VLGGNGFVGSHICREALDRGL--TVASLSRSGRSSL--R-------------D---SWANNVIWHQGNLLSS------DS  114 (198)
Q Consensus        61 vtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~--~-------------~---~~~~~~~~~~~D~~d~------~~  114 (198)
                      |||||||||.+|+++|++++.  +|+||.|..+...  +             .   ....+++++.+|++++      ++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999876  9999999864310  0             0   0157899999999874      56


Q ss_pred             HHHHhcCCCEEEEccccCC---CCccceehhhHHHHHHHHHHHHcCCCEEEEeeccc-cCCC------------------
Q 029125          115 WKEALDGVTAVISCVGGFG---SNSYMYKINGTANINAIRAASEKGVKRFVYISAAD-FGVA------------------  172 (198)
Q Consensus       115 ~~~~~~~~d~vi~~ag~~~---~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~-~~~~------------------  172 (198)
                      +..+.+++|+|||||+..+   +.+..+++|+.|+.++++.|.+...++|+|+||.. .+..                  
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~  160 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDP  160 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE-
T ss_pred             hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccchh
Confidence            7777789999999999765   34567899999999999999977777999999932 2111                  


Q ss_pred             -CCCcchHHHHHHHHHHHHHhhC
Q 029125          173 -NYLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       173 -~~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                       ....++|.+||+.+|++++++.
T Consensus       161 ~~~~~~gY~~SK~~aE~~l~~a~  183 (249)
T PF07993_consen  161 PQGFPNGYEQSKWVAERLLREAA  183 (249)
T ss_dssp             -TTSEE-HHHHHHHHHHHHHHHH
T ss_pred             hccCCccHHHHHHHHHHHHHHHH
Confidence             1234699999999999999875

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02240 UDP-glucose 4-epimerase

Probab=99.86  E-value=9.8e-21  Score=156.25  Aligned_cols=140  Identities=23%  Similarity=0.325  Sum_probs=112.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc------cc---cCCCCeEEEEccCCCHHHHHHHhc--CC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL------RD---SWANNVIWHQGNLLSSDSWKEALD--GV  122 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~------~~---~~~~~~~~~~~D~~d~~~~~~~~~--~~  122 (198)
                      .++++|+||||+||||.+++++|+++|++|++++|......      ..   ....++.++.+|++|++++.++++  ++
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~   82 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRF   82 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCC
Confidence            34689999999999999999999999999999987542210      00   112468899999999999999886  68


Q ss_pred             CEEEEccccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC----------CCCcchHHHHHHH
Q 029125          123 TAVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYLLQGYYEGKRA  185 (198)
Q Consensus       123 d~vi~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~----------~~~~~~Y~~sK~~  185 (198)
                      |+|||+|+...      .+...+++|+.++.+++++|.+.++++||++|| .+|+..          ..+..+|+.+|.+
T Consensus        83 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~  162 (352)
T PLN02240         83 DAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLF  162 (352)
T ss_pred             CEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHH
Confidence            99999998532      224468899999999999999989999999999 456532          2346789999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      +|.+++.+
T Consensus       163 ~e~~~~~~  170 (352)
T PLN02240        163 IEEICRDI  170 (352)
T ss_pred             HHHHHHHH
Confidence            99999764

>PLN02686 cinnamoyl-CoA reductase

Probab=99.86  E-value=5.9e-21  Score=158.88  Aligned_cols=143  Identities=21%  Similarity=0.235  Sum_probs=111.9

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--cc--------CCCCeEEEEccCCCHHHHHHHhcC
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DS--------WANNVIWHQGNLLSSDSWKEALDG  121 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~--------~~~~~~~~~~D~~d~~~~~~~~~~  121 (198)
                      ...++|+|+||||+||||++++++|+++|++|+++.|+......  ..        ...++.++.+|++|.+.+.+++++
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~  128 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG  128 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence            34567899999999999999999999999999998886432110  00        012578899999999999999999


Q ss_pred             CCEEEEccccCCC------CccceehhhHHHHHHHHHHHHc-CCCEEEEeecc---ccCC--CC----------------
Q 029125          122 VTAVISCVGGFGS------NSYMYKINGTANINAIRAASEK-GVKRFVYISAA---DFGV--AN----------------  173 (198)
Q Consensus       122 ~d~vi~~ag~~~~------~~~~~~~n~~~~~~~~~a~~~~-~~~~~v~~Ss~---~~~~--~~----------------  173 (198)
                      +|.|||+++....      +....++|+.++.+++++|.+. ++++|||+||.   +|+.  +.                
T Consensus       129 ~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~  208 (367)
T PLN02686        129 CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESF  208 (367)
T ss_pred             ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhh
Confidence            9999999986422      2345678999999999999886 79999999993   3432  10                


Q ss_pred             --CCcchHHHHHHHHHHHHHhhC
Q 029125          174 --YLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       174 --~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                        .+.++|+.+|.++|.+++.+.
T Consensus       209 ~~~p~~~Y~~sK~~~E~~~~~~~  231 (367)
T PLN02686        209 CRDNKLWYALGKLKAEKAAWRAA  231 (367)
T ss_pred             cccccchHHHHHHHHHHHHHHHH
Confidence              123579999999999987653

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.86  E-value=1e-20  Score=154.22  Aligned_cols=137  Identities=32%  Similarity=0.421  Sum_probs=112.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCC---
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG---  133 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~---  133 (198)
                      |+|+||||+|+||+++++.|+++|++|++++|++.... .....+++++.+|+.|.+++.++++++|+|||+++...   
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~   79 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRR-NLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWA   79 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccc-ccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCC
Confidence            47999999999999999999999999999999755421 11223688999999999999999999999999998542   


Q ss_pred             -CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCCC--------------CcchHHHHHHHHHHHHHhhC
Q 029125          134 -SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVANY--------------LLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       134 -~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~~--------------~~~~Y~~sK~~~e~~l~~~~  194 (198)
                       .+...+++|+.++.++++++.+.++++||++|| .+|+....              ....|+.+|.+.|.+++++.
T Consensus        80 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  156 (328)
T TIGR03466        80 PDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMA  156 (328)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHH
Confidence             234567899999999999999999999999999 55653111              13579999999999998764

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.86  E-value=8.3e-21  Score=150.71  Aligned_cols=140  Identities=22%  Similarity=0.342  Sum_probs=117.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc------ccccC--CCCeEEEEccCCCHHHHHHHhc--CCCEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS------LRDSW--ANNVIWHQGNLLSSDSWKEALD--GVTAV  125 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~------~~~~~--~~~~~~~~~D~~d~~~~~~~~~--~~d~v  125 (198)
                      .++||||||+||||.|.+.+|+++|+.|+++|.-.+..      .+...  ..++.++.+|+.|.+.++++|+  ++|.|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V   81 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV   81 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence            46899999999999999999999999999998533221      11111  3689999999999999999998  58999


Q ss_pred             EEccccC------CCCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC----------C-CCcchHHHHHHHHH
Q 029125          126 ISCVGGF------GSNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------N-YLLQGYYEGKRAAE  187 (198)
Q Consensus       126 i~~ag~~------~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~----------~-~~~~~Y~~sK~~~e  187 (198)
                      +|+|+..      ..+...+..|+.|++++++.+++.+++.+||.|| .+||.+          . .|.++|+.+|.+.|
T Consensus        82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE  161 (343)
T KOG1371|consen   82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIE  161 (343)
T ss_pred             EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHH
Confidence            9999843      3556778999999999999999999999999999 678753          2 37889999999999


Q ss_pred             HHHHhhCC
Q 029125          188 TELLTRYP  195 (198)
Q Consensus       188 ~~l~~~~~  195 (198)
                      +++.....
T Consensus       162 ~i~~d~~~  169 (343)
T KOG1371|consen  162 EIIHDYNK  169 (343)
T ss_pred             HHHHhhhc
Confidence            99987643

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.86  E-value=5.4e-21  Score=161.50  Aligned_cols=141  Identities=25%  Similarity=0.279  Sum_probs=121.4

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCccc------ccC-CCCeEEEEccCCCHHHHHHHhcC--
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLR------DSW-ANNVIWHQGNLLSSDSWKEALDG--  121 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~------~~~-~~~~~~~~~D~~d~~~~~~~~~~--  121 (198)
                      ...++|+|+||||+|.||+.+++++++.+ .++++++|++.+...      ... ..+..++.+|+.|.+.+..++++  
T Consensus       246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~k  325 (588)
T COG1086         246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHK  325 (588)
T ss_pred             hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCC
Confidence            34578999999999999999999999987 589999998765221      111 35788999999999999999998  


Q ss_pred             CCEEEEccccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhhCC
Q 029125          122 VTAVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYP  195 (198)
Q Consensus       122 ~d~vi~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~~~  195 (198)
                      +|+|||.|+..+      .+.+.+.+|+.|+.|++++|.+.++++||++||   +..-.|.+.||+||..+|.+++++..
T Consensus       326 vd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iST---DKAV~PtNvmGaTKr~aE~~~~a~~~  402 (588)
T COG1086         326 VDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLIST---DKAVNPTNVMGATKRLAEKLFQAANR  402 (588)
T ss_pred             CceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEec---CcccCCchHhhHHHHHHHHHHHHHhh
Confidence            999999998533      456788999999999999999999999999999   56678889999999999999998754

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.85  E-value=5.9e-21  Score=154.70  Aligned_cols=140  Identities=25%  Similarity=0.309  Sum_probs=114.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCcc---------------cccCCCCeEEEEccCC------CHHH
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSL---------------RDSWANNVIWHQGNLL------SSDS  114 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~---------------~~~~~~~~~~~~~D~~------d~~~  114 (198)
                      ++|++||||||+|.+++.+|+.+- .+|+|++|..+.+.               +..+..+++++.+|+.      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            479999999999999999999875 59999999876311               1234578999999996      4567


Q ss_pred             HHHHhcCCCEEEEccccCC---CCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCC--------------------
Q 029125          115 WKEALDGVTAVISCVGGFG---SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGV--------------------  171 (198)
Q Consensus       115 ~~~~~~~~d~vi~~ag~~~---~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~--------------------  171 (198)
                      +..+.+.+|.||||++..+   +.++.+..|+.|+..+++.|.....|.++|+||.+.+.                    
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~  160 (382)
T COG3320          81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNV  160 (382)
T ss_pred             HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccc
Confidence            8888889999999999654   56788999999999999999988888999999954221                    


Q ss_pred             CCCCcchHHHHHHHHHHHHHhhCCC
Q 029125          172 ANYLLQGYYEGKRAAETELLTRYPY  196 (198)
Q Consensus       172 ~~~~~~~Y~~sK~~~e~~l~~~~~~  196 (198)
                      .....++|+.|||++|.+++++...
T Consensus       161 ~~~~~~GY~~SKwvaE~Lvr~A~~r  185 (382)
T COG3320         161 GQGLAGGYGRSKWVAEKLVREAGDR  185 (382)
T ss_pred             cCccCCCcchhHHHHHHHHHHHhhc
Confidence            1233579999999999999998654

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.85  E-value=1.8e-20  Score=153.94  Aligned_cols=137  Identities=23%  Similarity=0.318  Sum_probs=109.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD--GVTAVISC  128 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~  128 (198)
                      |+|+||||+||||++++++|+++|++|++++|.......      .....++.++.+|++|.+.+.++++  ++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            479999999999999999999999999999865322111      0012356788999999999998886  58999999


Q ss_pred             cccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC-----------CCCcchHHHHHHHHHHHH
Q 029125          129 VGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA-----------NYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       129 ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~-----------~~~~~~Y~~sK~~~e~~l  190 (198)
                      |+...      .....+.+|+.++.++++++++.++++||++|| .+|+..           ..+.++|+.+|.++|.++
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~  160 (338)
T PRK10675         81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_pred             CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHH
Confidence            98543      123567899999999999999999999999999 456532           135689999999999999


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +++
T Consensus       161 ~~~  163 (338)
T PRK10675        161 TDL  163 (338)
T ss_pred             HHH
Confidence            865

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.85  E-value=6.6e-21  Score=161.56  Aligned_cols=134  Identities=23%  Similarity=0.245  Sum_probs=104.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---c-cCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D-SWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      +.|+|+||||+||||++|+++|+++|++|++++|.......   . ....+++++.+|+.+.     .+.++|+|||+|+
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHlAa  193 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHLAC  193 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEECce
Confidence            45799999999999999999999999999999985322111   0 1123678888898764     3568999999998


Q ss_pred             cCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC---------------CCCcchHHHHHHHHHH
Q 029125          131 GFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA---------------NYLLQGYYEGKRAAET  188 (198)
Q Consensus       131 ~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~---------------~~~~~~Y~~sK~~~e~  188 (198)
                      ...      .....+++|+.++.+++++|++.+. +|||+|| .+|+..               ..+.+.|+.+|..+|+
T Consensus       194 ~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~  272 (436)
T PLN02166        194 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET  272 (436)
T ss_pred             eccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHH
Confidence            532      2235578999999999999998886 8999999 667642               1234679999999999


Q ss_pred             HHHhhC
Q 029125          189 ELLTRY  194 (198)
Q Consensus       189 ~l~~~~  194 (198)
                      +++.+.
T Consensus       273 ~~~~y~  278 (436)
T PLN02166        273 LAMDYH  278 (436)
T ss_pred             HHHHHH
Confidence            998764

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.85  E-value=1.1e-20  Score=147.33  Aligned_cols=136  Identities=31%  Similarity=0.421  Sum_probs=114.1

Q ss_pred             EEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcC--CCEEEEccccCC---
Q 029125           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG--VTAVISCVGGFG---  133 (198)
Q Consensus        59 vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi~~ag~~~---  133 (198)
                      |+||||+||||.+++++|+++|++|+.+.|+...........++.++.+|+.|.+.+.+++++  +|+|||+|+...   
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPE   80 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHH
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccccc
Confidence            799999999999999999999999999998876543222223889999999999999999985  599999999752   


Q ss_pred             ---CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC----------CCcchHHHHHHHHHHHHHhhC
Q 029125          134 ---SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN----------YLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       134 ---~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~----------~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                         .....++.|+.++.++++++.+.++++|||+|| .+|+...          .+.++|+.+|...|++++.+.
T Consensus        81 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~  155 (236)
T PF01370_consen   81 SFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYA  155 (236)
T ss_dssp             HHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence               345667899999999999999999999999999 5676542          245789999999999998764

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02583 cinnamoyl-CoA reductase

Probab=99.85  E-value=3.3e-20  Score=150.18  Aligned_cols=139  Identities=18%  Similarity=0.219  Sum_probs=108.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc-----ccc--CCCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-----RDS--WANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~-----~~~--~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      ++++|+||||+||||++++++|+++|++|++++|+.....     ...  ...+++++.+|++|.+++.+++.++|.|+|
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~   84 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC   84 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            4678999999999999999999999999999998633211     111  124688999999999999999999999999


Q ss_pred             ccccCCC----CccceehhhHHHHHHHHHHHHc-CCCEEEEeecc-c--cCCC-C-----------CC-------cchHH
Q 029125          128 CVGGFGS----NSYMYKINGTANINAIRAASEK-GVKRFVYISAA-D--FGVA-N-----------YL-------LQGYY  180 (198)
Q Consensus       128 ~ag~~~~----~~~~~~~n~~~~~~~~~a~~~~-~~~~~v~~Ss~-~--~~~~-~-----------~~-------~~~Y~  180 (198)
                      .++....    ++..+++|+.++.++++++.+. ++++||++||. .  ++.. .           .+       ...|+
T Consensus        85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  164 (297)
T PLN02583         85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA  164 (297)
T ss_pred             eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence            8765432    3567899999999999999876 58899999993 3  2311 0           00       01699


Q ss_pred             HHHHHHHHHHHhh
Q 029125          181 EGKRAAETELLTR  193 (198)
Q Consensus       181 ~sK~~~e~~l~~~  193 (198)
                      .||..+|+++.++
T Consensus       165 ~sK~~aE~~~~~~  177 (297)
T PLN02583        165 LAKTLSEKTAWAL  177 (297)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998765

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.85  E-value=2.5e-20  Score=152.18  Aligned_cols=141  Identities=29%  Similarity=0.480  Sum_probs=113.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCc-cc-c-c--CCCCeEEEEccCCCHHHHHHHhcCCCEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSS-LR-D-S--WANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~-~~-~-~--~~~~~~~~~~D~~d~~~~~~~~~~~d~vi  126 (198)
                      .++.+++||||+||+|++|+++|++++  .+|.+++..+... .. . .  ....++++.+|+.|...+..+++++ .|+
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv   80 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVV   80 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEE
Confidence            356799999999999999999999998  7999999876521 11 1 1  2567999999999999999999999 777


Q ss_pred             Ecccc-C-----CCCccceehhhHHHHHHHHHHHHcCCCEEEEeecc-c-cCC------------CCCCcchHHHHHHHH
Q 029125          127 SCVGG-F-----GSNSYMYKINGTANINAIRAASEKGVKRFVYISAA-D-FGV------------ANYLLQGYYEGKRAA  186 (198)
Q Consensus       127 ~~ag~-~-----~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~-~-~~~------------~~~~~~~Y~~sK~~~  186 (198)
                      |+|+. .     .+.+..+++|+.||.+++++|.+.+++++||+||. + ++.            +.....+|+.||+.+
T Consensus        81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~a  160 (361)
T KOG1430|consen   81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALA  160 (361)
T ss_pred             EeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHH
Confidence            76653 2     23577899999999999999999999999999994 2 211            112235899999999


Q ss_pred             HHHHHhhCC
Q 029125          187 ETELLTRYP  195 (198)
Q Consensus       187 e~~l~~~~~  195 (198)
                      |++++++..
T Consensus       161 E~~Vl~an~  169 (361)
T KOG1430|consen  161 EKLVLEANG  169 (361)
T ss_pred             HHHHHHhcC
Confidence            999999864

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.85  E-value=1.3e-20  Score=159.94  Aligned_cols=134  Identities=24%  Similarity=0.258  Sum_probs=104.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc----ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      +.|+|+|||||||||++|+++|+++|++|++++|.......    .....+++++.+|+.++.     +.++|+|||+|+
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l~~~D~ViHlAa  192 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----LLEVDQIYHLAC  192 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----hcCCCEEEEeee
Confidence            56899999999999999999999999999999875322111    111246788899987653     457999999998


Q ss_pred             cCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC---------------CCcchHHHHHHHHHH
Q 029125          131 GFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN---------------YLLQGYYEGKRAAET  188 (198)
Q Consensus       131 ~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~---------------~~~~~Y~~sK~~~e~  188 (198)
                      ...      ++...+++|+.++.+++++|++.++ +|||+|| .+|+...               .+.+.|+.+|.++|.
T Consensus       193 ~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~  271 (442)
T PLN02206        193 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAET  271 (442)
T ss_pred             ecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHH
Confidence            532      2345678999999999999999886 8999999 5676321               124679999999999


Q ss_pred             HHHhhC
Q 029125          189 ELLTRY  194 (198)
Q Consensus       189 ~l~~~~  194 (198)
                      +++.+.
T Consensus       272 ~~~~y~  277 (442)
T PLN02206        272 LTMDYH  277 (442)
T ss_pred             HHHHHH
Confidence            988653

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.85  E-value=2.1e-20  Score=143.68  Aligned_cols=138  Identities=14%  Similarity=0.086  Sum_probs=111.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc--cccCC-CCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWA-NNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~--~~~~~-~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      +.|.++||||+++||.++++.|+++|++|++..|+.++..  ..... ..+..+..|++|.+++..+++       ++|+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            4588999999999999999999999999999999976521  12222 468899999999988665543       6899


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      +|||||...          +|+.++++|+.|.++..++.    .+++.++||++||...-.+.+..+.|+++|+++..+.
T Consensus        85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~fs  164 (246)
T COG4221          85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFS  164 (246)
T ss_pred             EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHHHHHHH
Confidence            999999542          56778999999999777775    5566679999999765566667788999999998765


Q ss_pred             Hh
Q 029125          191 LT  192 (198)
Q Consensus       191 ~~  192 (198)
                      ..
T Consensus       165 ~~  166 (246)
T COG4221         165 LG  166 (246)
T ss_pred             HH
Confidence            43

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.84  E-value=2.9e-20  Score=165.55  Aligned_cols=140  Identities=19%  Similarity=0.312  Sum_probs=110.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHC--CCeEEEeecCCCC-ccc----ccCCCCeEEEEccCCCHHHHHHHh--cCCCEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDR--GLTVASLSRSGRS-SLR----DSWANNVIWHQGNLLSSDSWKEAL--DGVTAV  125 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~--g~~V~~l~r~~~~-~~~----~~~~~~~~~~~~D~~d~~~~~~~~--~~~d~v  125 (198)
                      ++|+|||||||||||++|+++|+++  +++|++++|.... ...    .....+++++.+|+.|.+.+..++  .++|+|
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V   84 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI   84 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence            4689999999999999999999998  6899999875311 000    111347899999999998888766  579999


Q ss_pred             EEccccCCC------CccceehhhHHHHHHHHHHHHcC-CCEEEEeec-cccCCCC-------------CCcchHHHHHH
Q 029125          126 ISCVGGFGS------NSYMYKINGTANINAIRAASEKG-VKRFVYISA-ADFGVAN-------------YLLQGYYEGKR  184 (198)
Q Consensus       126 i~~ag~~~~------~~~~~~~n~~~~~~~~~a~~~~~-~~~~v~~Ss-~~~~~~~-------------~~~~~Y~~sK~  184 (198)
                      ||+|+....      ....+++|+.++.+++++|++.+ +++|||+|| .+|+...             .+.++|+.+|.
T Consensus        85 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~  164 (668)
T PLN02260         85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKA  164 (668)
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHH
Confidence            999996432      23467899999999999999887 899999999 5666421             24578999999


Q ss_pred             HHHHHHHhhC
Q 029125          185 AAETELLTRY  194 (198)
Q Consensus       185 ~~e~~l~~~~  194 (198)
                      ++|.+++.+.
T Consensus       165 ~aE~~v~~~~  174 (668)
T PLN02260        165 GAEMLVMAYG  174 (668)
T ss_pred             HHHHHHHHHH
Confidence            9999998753

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.84  E-value=3.1e-20  Score=153.41  Aligned_cols=137  Identities=18%  Similarity=0.241  Sum_probs=105.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCe-EEEeecCCC-Cc---cccc-CCCCeEEEEccCCCHHHHHHHhc--CCCEEEEc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLT-VASLSRSGR-SS---LRDS-WANNVIWHQGNLLSSDSWKEALD--GVTAVISC  128 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~-V~~l~r~~~-~~---~~~~-~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~  128 (198)
                      |+|+||||+||||++++++|+++|++ |+++++... ..   .... ...++.++.+|++|.+++.++++  ++|+|||+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL   80 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence            47999999999999999999999976 555555321 10   1011 12357889999999999999987  48999999


Q ss_pred             cccCC------CCccceehhhHHHHHHHHHHHHc---------CCCEEEEeec-cccCCC--------------------
Q 029125          129 VGGFG------SNSYMYKINGTANINAIRAASEK---------GVKRFVYISA-ADFGVA--------------------  172 (198)
Q Consensus       129 ag~~~------~~~~~~~~n~~~~~~~~~a~~~~---------~~~~~v~~Ss-~~~~~~--------------------  172 (198)
                      |+...      .+...+++|+.|+.+++++|.+.         ++++||++|| .+|+..                    
T Consensus        81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~  160 (352)
T PRK10084         81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTA  160 (352)
T ss_pred             CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccCC
Confidence            98642      24567899999999999999864         4568999999 566631                    


Q ss_pred             CCCcchHHHHHHHHHHHHHhh
Q 029125          173 NYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       173 ~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ..+.+.|+.+|.++|.+++.+
T Consensus       161 ~~p~~~Y~~sK~~~E~~~~~~  181 (352)
T PRK10084        161 YAPSSPYSASKASSDHLVRAW  181 (352)
T ss_pred             CCCCChhHHHHHHHHHHHHHH
Confidence            134578999999999998765

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.84  E-value=1.8e-19  Score=150.99  Aligned_cols=137  Identities=27%  Similarity=0.370  Sum_probs=112.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-------ccCCCCeEEEEccCCCHHHHHHHhc----C
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD----G  121 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-------~~~~~~~~~~~~D~~d~~~~~~~~~----~  121 (198)
                      +.++++|+||||||+||++++++|+++|++|++++|+..+...       .....+++++.+|++|++.+..+++    +
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~  136 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP  136 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence            3467899999999999999999999999999999997643110       0113478999999999999999987    5


Q ss_pred             CCEEEEccccCC-CCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          122 VTAVISCVGGFG-SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       122 ~d~vi~~ag~~~-~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      +|+||||++... .....+++|+.++.++++++++.++++||++||....   .+...|..+|...|+.+++
T Consensus       137 ~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~---~p~~~~~~sK~~~E~~l~~  205 (390)
T PLN02657        137 VDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQ---KPLLEFQRAKLKFEAELQA  205 (390)
T ss_pred             CcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeecccc---CcchHHHHHHHHHHHHHHh
Confidence            999999988532 2345678999999999999999999999999995322   3456799999999998875

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.8e-20  Score=148.78  Aligned_cols=138  Identities=21%  Similarity=0.159  Sum_probs=108.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc--cccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi  126 (198)
                      .|+++||||+|+||++++++|+++|++|++++|++....  ......++.++.+|++|.+++.++++       ++|+||
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV   81 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            368999999999999999999999999999999754311  11123478899999999988877654       489999


Q ss_pred             EccccCCC----------CccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          127 SCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       127 ~~ag~~~~----------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      ||+|....          +...+++|+.++.++++++    ++.+.++||++||.....+.++.+.|+.+|++.|.+++.
T Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~  161 (276)
T PRK06482         82 SNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEA  161 (276)
T ss_pred             ECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHHHHHH
Confidence            99986421          2345679999999999997    555678999999954334455678999999999988875


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       162 l  162 (276)
T PRK06482        162 V  162 (276)
T ss_pred             H
Confidence            4

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.84  E-value=7.8e-20  Score=146.43  Aligned_cols=139  Identities=14%  Similarity=0.083  Sum_probs=108.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v  125 (198)
                      ++++++||||+|+||++++++|+++|++|++++|++.+...  .....++.++.+|++|.+++.++++       ++|+|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            45789999999999999999999999999999997643211  1123468889999999998887765       48999


Q ss_pred             EEccccCCC----------CccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 029125          126 ISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       126 i~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      |||+|....          +...+++|+.+++++++++.    +.+.++||++||.....+.++...|+.+|++.|.+++
T Consensus        83 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~~~  162 (277)
T PRK06180         83 VNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISE  162 (277)
T ss_pred             EECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHHHHHH
Confidence            999996421          23457899999999998853    4456799999995433345667899999999998776


Q ss_pred             hh
Q 029125          192 TR  193 (198)
Q Consensus       192 ~~  193 (198)
                      ..
T Consensus       163 ~l  164 (277)
T PRK06180        163 SL  164 (277)
T ss_pred             HH
Confidence            54

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.83  E-value=9.1e-20  Score=145.29  Aligned_cols=136  Identities=18%  Similarity=0.136  Sum_probs=108.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS  127 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~  127 (198)
                      ++++|+||||+|+||++++++|+++|++|++++|+......   ..+++++.+|++|++++.++++       .+|+|||
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~   79 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP---IPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVN   79 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            45789999999999999999999999999999997544221   2468899999999999888776       4799999


Q ss_pred             ccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          128 CVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       128 ~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      |+|...          .++..+++|+.++.++++++    ++.+.++||++||...-.+.+....|+.+|++.+.+++..
T Consensus        80 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l  159 (270)
T PRK06179         80 NAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESL  159 (270)
T ss_pred             CCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHHHHHHH
Confidence            999642          12456789999998888875    5567889999999533334455678999999999887653

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.83  E-value=8.9e-20  Score=146.17  Aligned_cols=138  Identities=17%  Similarity=0.043  Sum_probs=106.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--------CCCEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--------GVTAVI  126 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--------~~d~vi  126 (198)
                      .+++|+||||+|+||.+++++|+++|++|++++|+++... .....++.++.+|++|.+++..+++        ++|+||
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~-~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li   81 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVA-ALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF   81 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence            4578999999999999999999999999999999865421 1112367889999999988776654        479999


Q ss_pred             EccccCCC----------CccceehhhHHHH----HHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          127 SCVGGFGS----------NSYMYKINGTANI----NAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       127 ~~ag~~~~----------~~~~~~~n~~~~~----~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      ||||....          +...+++|+.|..    .+++.+++.+.++||++||.....+.++...|+.+|++.|.+++.
T Consensus        82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~  161 (277)
T PRK05993         82 NNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLT  161 (277)
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHHHHHH
Confidence            99985321          2346789999954    555666677778999999954334556678999999999998765


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       162 l  162 (277)
T PRK05993        162 L  162 (277)
T ss_pred             H
Confidence            3

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.83  E-value=9.5e-20  Score=147.71  Aligned_cols=136  Identities=20%  Similarity=0.219  Sum_probs=106.4

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCC----ccccc-CCCCeEEEEccCCCHHHHHHHhcC--CCEEEEc
Q 029125           58 KLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRS----SLRDS-WANNVIWHQGNLLSSDSWKEALDG--VTAVISC  128 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~----~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi~~  128 (198)
                      +|+||||||+||++++++|+++|  ++|++++|....    ..... ...+++++.+|++|++++.+++++  +|+|||+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   80 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF   80 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence            58999999999999999999987  789998864211    11111 123688999999999999999987  8999999


Q ss_pred             cccCC------CCccceehhhHHHHHHHHHHHHcCCC-EEEEeec-cccCCC-----------CCCcchHHHHHHHHHHH
Q 029125          129 VGGFG------SNSYMYKINGTANINAIRAASEKGVK-RFVYISA-ADFGVA-----------NYLLQGYYEGKRAAETE  189 (198)
Q Consensus       129 ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~Ss-~~~~~~-----------~~~~~~Y~~sK~~~e~~  189 (198)
                      ++...      .+...+++|+.++.++++++.+.+.+ ++|++|| .+|+..           ..+...|+.+|+.+|.+
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  160 (317)
T TIGR01181        81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHL  160 (317)
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHH
Confidence            98643      23456789999999999999887544 8999999 455532           22456799999999998


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      ++++
T Consensus       161 ~~~~  164 (317)
T TIGR01181       161 VRAY  164 (317)
T ss_pred             HHHH
Confidence            8765

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.83  E-value=5.2e-19  Score=133.15  Aligned_cols=125  Identities=38%  Similarity=0.504  Sum_probs=105.9

Q ss_pred             EEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCCCCccc
Q 029125           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYM  138 (198)
Q Consensus        59 vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~  138 (198)
                      |+|+||||++|++++++|+++|++|+++.|++.+...   ..+++++.+|+.|++.+.++++++|+||++++....    
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~----   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK----   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT----
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc----
Confidence            7999999999999999999999999999999765333   679999999999999999999999999999986543    


Q ss_pred             eehhhHHHHHHHHHHHHcCCCEEEEeecc-ccCCCCC--------CcchHHHHHHHHHHHHHhh
Q 029125          139 YKINGTANINAIRAASEKGVKRFVYISAA-DFGVANY--------LLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       139 ~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~-~~~~~~~--------~~~~Y~~sK~~~e~~l~~~  193 (198)
                         +.....++++++++.++++++++|+. .+.....        ....|...|..+|+++++.
T Consensus        74 ---~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~  134 (183)
T PF13460_consen   74 ---DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRES  134 (183)
T ss_dssp             ---HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHS
T ss_pred             ---cccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhc
Confidence               27777899999999999999999994 3443222        1247899999999998765

...

>PRK06398 aldose dehydrogenase; Validated

Probab=99.82  E-value=3.3e-19  Score=141.48  Aligned_cols=134  Identities=12%  Similarity=0.103  Sum_probs=108.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi  126 (198)
                      .++++++||||+|+||.+++++|+++|++|++++|+....      .++.++.+|++|++++.++++       ++|+||
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li   77 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY------NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILV   77 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc------CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3568999999999999999999999999999999875431      367899999999988887765       589999


Q ss_pred             EccccCC----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          127 SCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       127 ~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      ||+|...          .|...+++|+.+++.+++++.+    .+.++||++||.....+.+....|+.+|++.+.+.+.
T Consensus        78 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~~~~  157 (258)
T PRK06398         78 NNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRS  157 (258)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHHHHHHHH
Confidence            9998532          2344578999999988887743    4567999999954444556778999999999988876


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       158 l  158 (258)
T PRK06398        158 I  158 (258)
T ss_pred             H
Confidence            4

>PRK06194 hypothetical protein; Provisional

Probab=99.82  E-value=1.8e-19  Score=144.77  Aligned_cols=139  Identities=14%  Similarity=0.059  Sum_probs=106.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      ++++++||||+|+||++++++|+++|++|++++|+......     .....++.++.+|++|.+++.++++       ++
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   84 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV   84 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            45799999999999999999999999999999987543111     0112357889999999999888776       47


Q ss_pred             CEEEEccccCCC----------CccceehhhHHHHHHHHHH----HHcCC------CEEEEeeccccCCCCCCcchHHHH
Q 029125          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGV------KRFVYISAADFGVANYLLQGYYEG  182 (198)
Q Consensus       123 d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~----~~~~~------~~~v~~Ss~~~~~~~~~~~~Y~~s  182 (198)
                      |+||||||....          +...+++|+.++.++++++    .+.+.      ++||++||.....+.+....|+.+
T Consensus        85 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  164 (287)
T PRK06194         85 HLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVS  164 (287)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchHHH
Confidence            999999996431          2335789999999877774    44433      589999995433344566789999


Q ss_pred             HHHHHHHHHhh
Q 029125          183 KRAAETELLTR  193 (198)
Q Consensus       183 K~~~e~~l~~~  193 (198)
                      |++.+.+++..
T Consensus       165 K~a~~~~~~~l  175 (287)
T PRK06194        165 KHAVVSLTETL  175 (287)
T ss_pred             HHHHHHHHHHH
Confidence            99999988764

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.82  E-value=1.4e-19  Score=143.52  Aligned_cols=139  Identities=18%  Similarity=0.141  Sum_probs=109.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCC-CeEEEEccCCCHHHHHHHhc-----
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWAN-NVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~-~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      ...+|+|+||||+++||.+++.+|+++|.+++.+.|+..+...      ..... ++.++++|++|.+++.++++     
T Consensus         9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~   88 (282)
T KOG1205|consen    9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH   88 (282)
T ss_pred             HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence            3568999999999999999999999999998888887554111      12233 59999999999999887653     


Q ss_pred             --CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHH
Q 029125          121 --GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKR  184 (198)
Q Consensus       121 --~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~  184 (198)
                        ++|++|||||...          +....+++|+.|+..+.+++    ++.+-+|||.+||...-.+.+..+.|.+||+
T Consensus        89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~ASK~  168 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSASKH  168 (282)
T ss_pred             cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchHHH
Confidence              6899999999643          12346899999998888876    4455579999999665555566669999999


Q ss_pred             HHHHHHH
Q 029125          185 AAETELL  191 (198)
Q Consensus       185 ~~e~~l~  191 (198)
                      +.+.+..
T Consensus       169 Al~~f~e  175 (282)
T KOG1205|consen  169 ALEGFFE  175 (282)
T ss_pred             HHHHHHH
Confidence            9997654

>PRK05717 oxidoreductase; Validated

Probab=99.82  E-value=3.5e-19  Score=140.87  Aligned_cols=142  Identities=11%  Similarity=0.048  Sum_probs=109.5

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      ...++|+++||||+|+||++++++|+++|++|++++|+..+...  .....++.++.+|++|.+++.++++       .+
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   85 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRL   85 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            34567899999999999999999999999999999887543211  1123467899999999988766543       47


Q ss_pred             CEEEEccccCCC------------CccceehhhHHHHHHHHHHHH---cCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          123 TAVISCVGGFGS------------NSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       123 d~vi~~ag~~~~------------~~~~~~~n~~~~~~~~~a~~~---~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      |+||||+|....            +...+++|+.+++++++++..   ...++||++||.....+.+....|+.+|++.+
T Consensus        86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~~  165 (255)
T PRK05717         86 DALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASKGGLL  165 (255)
T ss_pred             CEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCcchHHHHHHHH
Confidence            999999996421            235678999999999999863   22468999998543334455678999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       166 ~~~~~l  171 (255)
T PRK05717        166 ALTHAL  171 (255)
T ss_pred             HHHHHH
Confidence            888765

>PLN02996 fatty acyl-CoA reductase

Probab=99.82  E-value=2.1e-19  Score=154.50  Aligned_cols=118  Identities=18%  Similarity=0.195  Sum_probs=93.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC---CeEEEeecCCCCccc------c-----c---------------CCCCeEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLR------D-----S---------------WANNVIW  104 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g---~~V~~l~r~~~~~~~------~-----~---------------~~~~~~~  104 (198)
                      .++++|+|||||||||++|+++|++.+   .+|+|+.|.......      .     .               ...++++
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            467899999999999999999999864   378999997643110      0     0               0157899


Q ss_pred             EEccCC-------CHHHHHHHhcCCCEEEEccccCCC---CccceehhhHHHHHHHHHHHHc-CCCEEEEeec-cccCC
Q 029125          105 HQGNLL-------SSDSWKEALDGVTAVISCVGGFGS---NSYMYKINGTANINAIRAASEK-GVKRFVYISA-ADFGV  171 (198)
Q Consensus       105 ~~~D~~-------d~~~~~~~~~~~d~vi~~ag~~~~---~~~~~~~n~~~~~~~~~a~~~~-~~~~~v~~Ss-~~~~~  171 (198)
                      +.+|++       |.+.+..+++++|+|||+|+....   ....+.+|+.|+.+++++|++. ++++||++|| .+||.
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~  167 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGE  167 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecC
Confidence            999998       445577888899999999997543   3456789999999999999885 6889999999 56654

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.82  E-value=2.6e-19  Score=153.90  Aligned_cols=142  Identities=25%  Similarity=0.297  Sum_probs=111.9

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc--------------cCCCCeEEEEccCCCHHHHHH
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD--------------SWANNVIWHQGNLLSSDSWKE  117 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~--------------~~~~~~~~~~~D~~d~~~~~~  117 (198)
                      ...++++|+||||+|+||++++++|+++|++|++++|+..+....              ....++.++.+|+.|.+++.+
T Consensus        76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~  155 (576)
T PLN03209         76 DTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP  155 (576)
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence            344678999999999999999999999999999999986542110              001358899999999999999


Q ss_pred             HhcCCCEEEEccccCC----CCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccC---CC---CCCcchHHHHHHHHH
Q 029125          118 ALDGVTAVISCVGGFG----SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFG---VA---NYLLQGYYEGKRAAE  187 (198)
Q Consensus       118 ~~~~~d~vi~~ag~~~----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~---~~---~~~~~~Y~~sK~~~e  187 (198)
                      ++.++|+||||+|...    ++...+++|+.|+.++++++.+.+++|||++||....   ..   ......|...|..+|
T Consensus       156 aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~~~sk~~~~~~KraaE  235 (576)
T PLN03209        156 ALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAE  235 (576)
T ss_pred             HhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccchhhHHHHHHHHHHHH
Confidence            9999999999998643    2344578899999999999999999999999995321   11   112345778888999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      +++.+.
T Consensus       236 ~~L~~s  241 (576)
T PLN03209        236 EALIAS  241 (576)
T ss_pred             HHHHHc
Confidence            888764

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.82  E-value=7.8e-20  Score=148.43  Aligned_cols=130  Identities=19%  Similarity=0.244  Sum_probs=95.3

Q ss_pred             EEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHH---H-HHHHhc-----CCCEEEEcc
Q 029125           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSD---S-WKEALD-----GVTAVISCV  129 (198)
Q Consensus        59 vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~---~-~~~~~~-----~~d~vi~~a  129 (198)
                      |+||||+||||++|+++|+++|++++++.|+......     ...+..+|+.|..   + +..+++     ++|+|||+|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A   76 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-----FVNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEG   76 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH-----HHhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECc
Confidence            7999999999999999999999987777665432110     0122345665543   3 233332     689999999


Q ss_pred             ccCC----CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC----------CCCcchHHHHHHHHHHHHHhhC
Q 029125          130 GGFG----SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       130 g~~~----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~----------~~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                      |...    .....++.|+.++.+++++|++.++ +|||+|| .+|+..          ..|.++|+.+|.++|++++.+.
T Consensus        77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  155 (308)
T PRK11150         77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQIL  155 (308)
T ss_pred             eecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            8432    1234678999999999999999887 6999999 567643          2355789999999999988764

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.82  E-value=3.2e-19  Score=140.04  Aligned_cols=139  Identities=17%  Similarity=0.141  Sum_probs=107.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-----------CCCE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-----------GVTA  124 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----------~~d~  124 (198)
                      |++++||||+|+||.+++++|+++|++|++++|+..+........++.++.+|+.|.+++.++++           .+|+
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL   80 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence            46899999999999999999999999999999976543222223468899999999988877432           4789


Q ss_pred             EEEccccCCC-----------CccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          125 VISCVGGFGS-----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       125 vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      +|||+|....           +...+++|+.++..+.+.+.    +.+.++||++||.....+.++...|+.+|.+.|.+
T Consensus        81 ~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (243)
T PRK07023         81 LINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAALDHH  160 (243)
T ss_pred             EEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHHHHHH
Confidence            9999985321           24567899999776666553    34457999999954445556678999999999999


Q ss_pred             HHhhC
Q 029125          190 LLTRY  194 (198)
Q Consensus       190 l~~~~  194 (198)
                      ++...
T Consensus       161 ~~~~~  165 (243)
T PRK07023        161 ARAVA  165 (243)
T ss_pred             HHHHH
Confidence            88653

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.82  E-value=3.7e-19  Score=140.49  Aligned_cols=137  Identities=19%  Similarity=0.175  Sum_probs=109.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi  126 (198)
                      .++++++||||+|+||++++++|+++|++|++++|+..+.   ....++.++.+|+.|++++.++++       ++|+||
T Consensus         4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   80 (252)
T PRK07856          4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET---VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLV   80 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh---hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3578999999999999999999999999999999976431   123468899999999988887765       469999


Q ss_pred             EccccCC----------CCccceehhhHHHHHHHHHHHH-----cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 029125          127 SCVGGFG----------SNSYMYKINGTANINAIRAASE-----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       127 ~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~-----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      ||+|...          .++..+++|+.++..+++++..     .+.++||++||.....+.+....|+.+|++.+.+++
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~  160 (252)
T PRK07856         81 NNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTR  160 (252)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHHHHHHH
Confidence            9998532          1245678999999999988754     234689999996544555667899999999999887


Q ss_pred             hh
Q 029125          192 TR  193 (198)
Q Consensus       192 ~~  193 (198)
                      ..
T Consensus       161 ~l  162 (252)
T PRK07856        161 SL  162 (252)
T ss_pred             HH
Confidence            65

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.82  E-value=2.1e-19  Score=141.38  Aligned_cols=140  Identities=16%  Similarity=0.152  Sum_probs=110.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      +..+++++||||+++||..++++|+++|++|+++.|+.++..+      ....-.+.++.+|+++++++..+.+      
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            3467899999999999999999999999999999999765211      1123457899999999998887664      


Q ss_pred             -CCCEEEEccccCC-------CC---ccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 -GVTAVISCVGGFG-------SN---SYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 -~~d~vi~~ag~~~-------~~---~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                       .+|++|||||...       ++   ...+++|+.+...+..+.    .+.+.++||+++|...-.+.+..+.|++||+.
T Consensus        83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~  162 (265)
T COG0300          83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAF  162 (265)
T ss_pred             CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHH
Confidence             5899999999532       11   356789988887655554    56677899999996655667788899999998


Q ss_pred             HHHHHHh
Q 029125          186 AETELLT  192 (198)
Q Consensus       186 ~e~~l~~  192 (198)
                      +-.+.+.
T Consensus       163 v~~fSea  169 (265)
T COG0300         163 VLSFSEA  169 (265)
T ss_pred             HHHHHHH
Confidence            8766543

>PLN02778 3,5-epimerase/4-reductase

Probab=99.81  E-value=3.6e-19  Score=144.27  Aligned_cols=121  Identities=21%  Similarity=0.269  Sum_probs=92.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEccccC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGF  132 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~  132 (198)
                      ..|+||||||+||||++|+++|+++|++|+...                   .|+.|.+.+...++  ++|+|||+||..
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-------------------~~~~~~~~v~~~l~~~~~D~ViH~Aa~~   68 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-------------------GRLENRASLEADIDAVKPTHVFNAAGVT   68 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec-------------------CccCCHHHHHHHHHhcCCCEEEECCccc
Confidence            457899999999999999999999999987532                   24556666666665  689999999965


Q ss_pred             CC---------CccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCC------------C-----CCCcchHHHHHHHH
Q 029125          133 GS---------NSYMYKINGTANINAIRAASEKGVKRFVYISAADFGV------------A-----NYLLQGYYEGKRAA  186 (198)
Q Consensus       133 ~~---------~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~------------~-----~~~~~~Y~~sK~~~  186 (198)
                      ..         +...+++|+.++.+++++|++.+++++++.|+.+|+.            .     .++.+.|+.+|+++
T Consensus        69 ~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~  148 (298)
T PLN02778         69 GRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMV  148 (298)
T ss_pred             CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHH
Confidence            32         1345789999999999999999987655544454431            0     11236899999999


Q ss_pred             HHHHHhhC
Q 029125          187 ETELLTRY  194 (198)
Q Consensus       187 e~~l~~~~  194 (198)
                      |.+++.+.
T Consensus       149 E~~~~~y~  156 (298)
T PLN02778        149 EELLKNYE  156 (298)
T ss_pred             HHHHHHhh
Confidence            99998764

>PRK06182 short chain dehydrogenase; Validated

Probab=99.81  E-value=2.7e-19  Score=142.88  Aligned_cols=137  Identities=18%  Similarity=0.087  Sum_probs=105.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS  127 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~  127 (198)
                      ++++++||||+|+||++++++|+++|++|++++|+.++.. .....++.++.+|++|++++.++++       ++|+|||
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~-~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~   80 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKME-DLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN   80 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            3579999999999999999999999999999999864321 1112458899999999999888775       6899999


Q ss_pred             ccccCC----------CCccceehhhHHHHHHHH----HHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          128 CVGGFG----------SNSYMYKINGTANINAIR----AASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       128 ~ag~~~----------~~~~~~~~n~~~~~~~~~----a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      |+|...          .++..+++|+.+...+++    .+++.+.++||++||.....+.+....|+.+|++.+.+.+.
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~  159 (273)
T PRK06182         81 NAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDA  159 (273)
T ss_pred             CCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHHHHHHH
Confidence            998642          124567899888655444    55666778999999954333444556899999999987653

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.81  E-value=4.3e-19  Score=140.37  Aligned_cols=140  Identities=20%  Similarity=0.131  Sum_probs=106.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi  126 (198)
                      .++|+++||||+|+||.+++++|+++|++|+++.++...........++.++.+|++|++++.++++       ++|+||
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li   84 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV   84 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3568999999999999999999999999999887764332221112257899999999998887765       589999


Q ss_pred             EccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeec-cccCCCCCCcchHHHHHHHHHHHHH
Q 029125          127 SCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISA-ADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       127 ~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss-~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      ||+|...          .+...+++|+.+++.+++.+    .+.+.++||++|| ..++.+.+....|+.+|++.+.+++
T Consensus        85 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~  164 (255)
T PRK06463         85 NNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTR  164 (255)
T ss_pred             ECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHHHHHHHHH
Confidence            9998632          12345789999977665554    4455679999999 4444444566789999999998887


Q ss_pred             hh
Q 029125          192 TR  193 (198)
Q Consensus       192 ~~  193 (198)
                      ..
T Consensus       165 ~l  166 (255)
T PRK06463        165 RL  166 (255)
T ss_pred             HH
Confidence            65

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.81  E-value=9.9e-19  Score=137.51  Aligned_cols=139  Identities=20%  Similarity=0.206  Sum_probs=107.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ++++++||||+|+||++++++|+++|++|++++|+.....+      .....++.++.+|++|++++..+++       +
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            45799999999999999999999999999999987532111      1112457889999999998887765       5


Q ss_pred             CCEEEEccccCC----CCccceehhhHHHHHHHHHHHHcC--CCEEEEeeccc-c--C--CCCCCcchHHHHHHHHHHHH
Q 029125          122 VTAVISCVGGFG----SNSYMYKINGTANINAIRAASEKG--VKRFVYISAAD-F--G--VANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       122 ~d~vi~~ag~~~----~~~~~~~~n~~~~~~~~~a~~~~~--~~~~v~~Ss~~-~--~--~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      +|+||||+|...    .+...+++|+.++.++++++.+..  .++||++||.. .  +  .+.+...+|+.+|+++|.++
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~~~  164 (248)
T PRK07806         85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGEDAL  164 (248)
T ss_pred             CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHHHHHHHHHHH
Confidence            899999998532    345678999999999999997642  35899999832 1  1  11223568999999999988


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       165 ~~l  167 (248)
T PRK07806        165 RAL  167 (248)
T ss_pred             HHH
Confidence            875

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.81  E-value=2.3e-19  Score=144.60  Aligned_cols=122  Identities=29%  Similarity=0.402  Sum_probs=95.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEccccCC-
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFG-  133 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~~-  133 (198)
                      |+||||||+|+||++|.+.|.++|++|+.+.|.                ..|++|.+.+.++++  ++|+|||+|+... 
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~   64 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS----------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNV   64 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------CS-TTSHHHHHHHHHHH--SEEEE------H
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------hcCCCCHHHHHHHHHHhCCCeEeccceeecH
Confidence            689999999999999999999999999999775                558999999999887  5899999998653 


Q ss_pred             -----CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCC----------CCCCcchHHHHHHHHHHHHHhhCC
Q 029125          134 -----SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGV----------ANYLLQGYYEGKRAAETELLTRYP  195 (198)
Q Consensus       134 -----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~----------~~~~~~~Y~~sK~~~e~~l~~~~~  195 (198)
                           .++..+.+|+.++.+++++|.+.+. ++||+|| .+|+.          ...|.+.||.+|+.+|+.+++.++
T Consensus        65 ~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~~  141 (286)
T PF04321_consen   65 DACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAACP  141 (286)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH-S
T ss_pred             HhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence                 4466889999999999999999887 8999999 66632          345578999999999999998654

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.81  E-value=5.1e-19  Score=140.05  Aligned_cols=139  Identities=16%  Similarity=0.117  Sum_probs=106.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      ++++++||||+|+||.+++++|+++|++|++++|++.....     ......+.++.+|++|.+.+.++++       ++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999998643111     1113457889999999998887765       38


Q ss_pred             CEEEEccccCCC----------CccceehhhHHHH----HHHHHH-HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          123 TAVISCVGGFGS----------NSYMYKINGTANI----NAIRAA-SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       123 d~vi~~ag~~~~----------~~~~~~~n~~~~~----~~~~a~-~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      |+||||+|....          ++..+++|+.+.+    .+++.+ ++.+.++||++||.....+.++...|+.+|.+.+
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~  165 (262)
T PRK13394         86 DILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLL  165 (262)
T ss_pred             CEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHH
Confidence            999999996421          2345678999854    555555 5667889999999543344555678999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       166 ~~~~~l  171 (262)
T PRK13394        166 GLARVL  171 (262)
T ss_pred             HHHHHH
Confidence            887755

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.81  E-value=2.8e-19  Score=147.47  Aligned_cols=137  Identities=22%  Similarity=0.315  Sum_probs=107.1

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCcc-----cc----------cCC-CCeEEEEccCCC------HH
Q 029125           58 KLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSL-----RD----------SWA-NNVIWHQGNLLS------SD  113 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~-----~~----------~~~-~~~~~~~~D~~d------~~  113 (198)
                      +|+|||||||||++++++|+++|  ++|+|++|+.....     ..          ... .+++++.+|+++      .+
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999998  68999999765210     00          001 478999999975      35


Q ss_pred             HHHHHhcCCCEEEEccccCC---CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC---------------C
Q 029125          114 SWKEALDGVTAVISCVGGFG---SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN---------------Y  174 (198)
Q Consensus       114 ~~~~~~~~~d~vi~~ag~~~---~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~---------------~  174 (198)
                      .+..+.+++|+|||+|+...   .....+++|+.++.+++++|.+.++++|+|+|| .+++...               .
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~  160 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPG  160 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccc
Confidence            66777789999999999654   234456799999999999999988889999999 4454311               1


Q ss_pred             CcchHHHHHHHHHHHHHhhC
Q 029125          175 LLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       175 ~~~~Y~~sK~~~e~~l~~~~  194 (198)
                      +..+|+.+|+++|.+++++.
T Consensus       161 ~~~~Y~~sK~~~E~~~~~~~  180 (367)
T TIGR01746       161 LAGGYAQSKWVAELLVREAS  180 (367)
T ss_pred             cCCChHHHHHHHHHHHHHHH
Confidence            23579999999999988763

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.80  E-value=5.1e-19  Score=139.86  Aligned_cols=140  Identities=14%  Similarity=0.095  Sum_probs=110.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++|+++||||+|+||.+++++|+++|++|++++|++.+...     .....++.++.+|++|.+++.++++       .
T Consensus         8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (255)
T PRK07523          8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP   87 (255)
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            467899999999999999999999999999999997543111     1112357889999999998888775       4


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|+|||++|...          .++..+.+|+.++.++++++.+    .+.++||++||.....+.+....|+.+|.+.+
T Consensus        88 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~~  167 (255)
T PRK07523         88 IDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVG  167 (255)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHHHHH
Confidence            899999998542          1234567999999999988864    35679999999544445566789999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       168 ~~~~~~  173 (255)
T PRK07523        168 NLTKGM  173 (255)
T ss_pred             HHHHHH
Confidence            988765

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.80  E-value=5.9e-19  Score=141.71  Aligned_cols=119  Identities=26%  Similarity=0.349  Sum_probs=100.0

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCC--CEEEEccccCCC-
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGV--TAVISCVGGFGS-  134 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--d~vi~~ag~~~~-  134 (198)
                      +|+||||+|+||++++++|+++|++|++++|.                .+|+.|.+++.+++++.  |+|||+++.... 
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~   64 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVD   64 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------ccCCCCHHHHHHHHHhCCCCEEEECCcccccc
Confidence            58999999999999999999999999999884                46999999999999865  999999986432 


Q ss_pred             -----CccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC----------CCCcchHHHHHHHHHHHHHhh
Q 029125          135 -----NSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       135 -----~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~----------~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                           +...+++|+.++.++++++.+.+. +||++|| .+|+..          ..+.+.|+.+|..+|.+++.+
T Consensus        65 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~  138 (287)
T TIGR01214        65 GAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA  138 (287)
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh
Confidence                 234578999999999999988875 8999998 556431          224578999999999999875

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.80  E-value=7.2e-19  Score=140.66  Aligned_cols=138  Identities=15%  Similarity=0.067  Sum_probs=107.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi  126 (198)
                      +++|+||||+|+||++++++|+++|++|++++|+......  ......+.++.+|++|.+++.++++       ++|+||
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            5789999999999999999999999999999997543111  1123467889999999988877654       579999


Q ss_pred             EccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          127 SCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       127 ~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      ||+|...          .+...+++|+.+++.+++.+    ++.+.++||++||.....+.+....|+.+|++.+.+++.
T Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~  162 (275)
T PRK08263         83 NNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEA  162 (275)
T ss_pred             ECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHHHHHH
Confidence            9999642          23456789999998777775    456678999999954334455667899999998887765


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       163 l  163 (275)
T PRK08263        163 L  163 (275)
T ss_pred             H
Confidence            4

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.80  E-value=5.7e-19  Score=156.82  Aligned_cols=136  Identities=23%  Similarity=0.216  Sum_probs=106.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHH--HCCCeEEEeecCCCCccc----cc-CCCCeEEEEccCCCH------HHHHHHhcCCC
Q 029125           57 EKLLVLGGNGFVGSHICREAL--DRGLTVASLSRSGRSSLR----DS-WANNVIWHQGNLLSS------DSWKEALDGVT  123 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~--~~g~~V~~l~r~~~~~~~----~~-~~~~~~~~~~D~~d~------~~~~~~~~~~d  123 (198)
                      |+|+|||||||||++|+++|+  ++|++|++++|+......    .. ...+++++.+|++|+      +.+.++ +++|
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D   79 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID   79 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence            479999999999999999999  579999999996432111    00 125689999999984      455555 8999


Q ss_pred             EEEEccccCC---CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC------------CCCcchHHHHHHHHH
Q 029125          124 AVISCVGGFG---SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA------------NYLLQGYYEGKRAAE  187 (198)
Q Consensus       124 ~vi~~ag~~~---~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~------------~~~~~~Y~~sK~~~e  187 (198)
                      +|||+||...   .....+++|+.++.+++++|.+.++++|||+|| .+|+..            ..+.++|+.+|+.+|
T Consensus        80 ~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E  159 (657)
T PRK07201         80 HVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAE  159 (657)
T ss_pred             EEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHHH
Confidence            9999999643   234567899999999999999999999999999 455432            123467999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      +++++.
T Consensus       160 ~~~~~~  165 (657)
T PRK07201        160 KLVREE  165 (657)
T ss_pred             HHHHHc
Confidence            999853

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.80  E-value=1.6e-18  Score=140.98  Aligned_cols=136  Identities=27%  Similarity=0.422  Sum_probs=107.6

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc-c---CCCCeEEEEccCCCHHHHHHHhc--CCCEEEEcccc
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-S---WANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGG  131 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~-~---~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~  131 (198)
                      +|+||||+|+||++++++|+++|++|++++|........ .   ...++.++.+|+.|.+++.++++  ++|+|||++|.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~   80 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL   80 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence            589999999999999999999999999887643221110 0   01257788999999999999886  69999999986


Q ss_pred             CC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC----------CCcchHHHHHHHHHHHHHhh
Q 029125          132 FG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN----------YLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       132 ~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~----------~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ..      .+...++.|+.++.++++++.+.++++||++|| ..|+...          .+...|+.+|.++|.+++..
T Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~  159 (328)
T TIGR01179        81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDL  159 (328)
T ss_pred             cCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHH
Confidence            42      234567899999999999999988899999998 4555321          24578999999999988865

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.80  E-value=9.3e-19  Score=139.16  Aligned_cols=140  Identities=16%  Similarity=0.073  Sum_probs=110.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++++++||||+|+||.++++.|+++|++|++++|+.++...     .....++.++.+|++|++++.++++       +
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR   87 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999999997543111     1113467889999999998877664       6


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH-----cCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE-----KGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~-----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      +|+|||+||...          .+...+.+|+.++.++.+++..     .+.++||++||.....+..+...|+.+|++.
T Consensus        88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~  167 (263)
T PRK07814         88 LDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAAL  167 (263)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHHHHH
Confidence            899999998532          1234578999999999999863     4557899999954334556678999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       168 ~~~~~~~  174 (263)
T PRK07814        168 AHYTRLA  174 (263)
T ss_pred             HHHHHHH
Confidence            9888764

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.80  E-value=9.1e-19  Score=138.80  Aligned_cols=140  Identities=16%  Similarity=0.065  Sum_probs=109.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---c--c--CCCCeEEEEccCCCHHHHHHHhc------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--S--WANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---~--~--~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      .++|+++||||+|+||.+++++|+++|++|++++|+.+....   .  .  ...++.++.+|++|++++.++++      
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            357899999999999999999999999999999997543111   0  0  13457889999999998887765      


Q ss_pred             -CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                       ++|++|||+|...          .+...+++|+.+++.+++++.    +.+.++||++||.....+.+...+|+.+|++
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa  164 (260)
T PRK07063         85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHG  164 (260)
T ss_pred             CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHHHH
Confidence             5899999999532          234557899999998888864    3455699999995433445566789999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+++..
T Consensus       165 ~~~~~~~l  172 (260)
T PRK07063        165 LLGLTRAL  172 (260)
T ss_pred             HHHHHHHH
Confidence            99888765

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.80  E-value=9e-19  Score=138.37  Aligned_cols=137  Identities=13%  Similarity=0.123  Sum_probs=105.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-CCCEEEEcc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-GVTAVISCV  129 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-~~d~vi~~a  129 (198)
                      +++|+||||+|+||++++++|+++|++|++++|+......     .....++.++.+|++|++++..++. ++|+||||+
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a   81 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA   81 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence            4689999999999999999999999999999997543111     1113468899999999999998887 899999999


Q ss_pred             ccCCC----------CccceehhhHHHHHHHHH----HHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          130 GGFGS----------NSYMYKINGTANINAIRA----ASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       130 g~~~~----------~~~~~~~n~~~~~~~~~a----~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      |....          ++..+++|+.++.++.+.    +.+.+.++||++||.....+.+....|+.+|.+.|.+++.
T Consensus        82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~~~~  158 (257)
T PRK09291         82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEA  158 (257)
T ss_pred             CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHHHHHH
Confidence            85421          234567888888765554    4456678999999953333345567899999999987664

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.80  E-value=3.4e-18  Score=135.20  Aligned_cols=140  Identities=23%  Similarity=0.269  Sum_probs=105.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc-cCCCCeEEEEccCCC-HHHHHHHh-cCCCEEEEccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-SWANNVIWHQGNLLS-SDSWKEAL-DGVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~-~~~~~~~~~~~D~~d-~~~~~~~~-~~~d~vi~~ag  130 (198)
                      ..+++|+||||+|++|++++++|+++|++|+++.|++++.... ....+++++.+|++| .+.+.+.+ .++|+||+++|
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g   94 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATG   94 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCC
Confidence            4578999999999999999999999999999999986542111 112468999999998 46777777 68999999998


Q ss_pred             cCC--CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC--CCc---------chHHHHHHHHHHHHHhh
Q 029125          131 GFG--SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN--YLL---------QGYYEGKRAAETELLTR  193 (198)
Q Consensus       131 ~~~--~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~--~~~---------~~Y~~sK~~~e~~l~~~  193 (198)
                      ...  .....+++|..++.++++++.+.++++|||+|| .+|+...  ...         ..|...|..+|+++++.
T Consensus        95 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~  171 (251)
T PLN00141         95 FRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKS  171 (251)
T ss_pred             CCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhc
Confidence            632  223346789999999999999999999999999 4455321  111         12345688888877653

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2.7e-18  Score=136.00  Aligned_cols=136  Identities=18%  Similarity=0.223  Sum_probs=106.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi  126 (198)
                      .++++|+||||+|+||.+++++|+++|++|++++|+....    ...++.++.+|++|.+++.++++       ++|+||
T Consensus         7 ~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   82 (260)
T PRK06523          7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD----LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILV   82 (260)
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh----cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4578999999999999999999999999999999975442    13467899999999988776543       589999


Q ss_pred             EccccCC------------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCC-CCCcchHHHHHHHHHHH
Q 029125          127 SCVGGFG------------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVA-NYLLQGYYEGKRAAETE  189 (198)
Q Consensus       127 ~~ag~~~------------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~-~~~~~~Y~~sK~~~e~~  189 (198)
                      ||+|...            .+...+++|+.+++++.+++    .+.+.++||++||.....+ ......|+.+|.+.+.+
T Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~sK~a~~~l  162 (260)
T PRK06523         83 HVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTY  162 (260)
T ss_pred             ECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHHHHHHHHH
Confidence            9998431            13445789999998776665    4455678999999432223 33678899999999988


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      ++..
T Consensus       163 ~~~~  166 (260)
T PRK06523        163 SKSL  166 (260)
T ss_pred             HHHH
Confidence            7765

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.80  E-value=8.2e-19  Score=142.43  Aligned_cols=132  Identities=20%  Similarity=0.249  Sum_probs=101.9

Q ss_pred             EEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc----CCCEEEEccccCC
Q 029125           59 LLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD----GVTAVISCVGGFG  133 (198)
Q Consensus        59 vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~d~vi~~ag~~~  133 (198)
                      |+||||+||||+++++.|+++|+ +|++++|........  ......+..|+.+.+.++.+.+    ++|+|||+|+...
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~   78 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHKFL--NLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSD   78 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchhhh--hhhheeeeccCcchhHHHHHHhhccCCCCEEEECccccC
Confidence            69999999999999999999997 788887754322111  0112456788888887777654    7999999998642


Q ss_pred             ----CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC----------CCCcchHHHHHHHHHHHHHhh
Q 029125          134 ----SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       134 ----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~----------~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                          ++...+++|+.++.+++++|.+.++ +|||+|| .+|+..          ..+.+.|+.+|..+|.+++++
T Consensus        79 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~  152 (314)
T TIGR02197        79 TTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRR  152 (314)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHHHH
Confidence                3345678999999999999998887 7999999 567632          125678999999999999864

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.80  E-value=1.1e-18  Score=137.80  Aligned_cols=139  Identities=15%  Similarity=0.102  Sum_probs=106.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      ++++|+||||+|+||.+++++|+++|++|++++|++.+...     .....++.++.+|+.|++++.++++       ++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            45799999999999999999999999999999998654211     1123468899999999998887765       58


Q ss_pred             CEEEEccccCCC----------CccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       123 d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      |+|||++|....          +...+++|+.+++++++.+    ++.+.++||++||.....+....+.|+.+|++.+.
T Consensus        83 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~~~  162 (258)
T PRK12429         83 DILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIG  162 (258)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHHHH
Confidence            999999985421          1335678888866555554    45678899999995433455667899999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       163 ~~~~l  167 (258)
T PRK12429        163 LTKVV  167 (258)
T ss_pred             HHHHH
Confidence            77654

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.80  E-value=8.4e-19  Score=141.79  Aligned_cols=140  Identities=18%  Similarity=0.164  Sum_probs=107.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++++++||||+|+||.+++++|+++|++|++++|+.+....     ......+.++.+|++|.+++.++++       +
T Consensus        38 ~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  117 (293)
T PRK05866         38 LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG  117 (293)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            356899999999999999999999999999999998543111     0112357889999999998888776       6


Q ss_pred             CCEEEEccccCCC------------CccceehhhHHHHHHHHHH----HHcCCCEEEEeecc-ccCCCCCCcchHHHHHH
Q 029125          122 VTAVISCVGGFGS------------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAA-DFGVANYLLQGYYEGKR  184 (198)
Q Consensus       122 ~d~vi~~ag~~~~------------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~-~~~~~~~~~~~Y~~sK~  184 (198)
                      +|+||||||....            +...+++|+.+...+++++    .+.+.++||++||. .+..+.+....|+.+|+
T Consensus       118 id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~asKa  197 (293)
T PRK05866        118 VDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASKA  197 (293)
T ss_pred             CCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHHHHHH
Confidence            8999999985421            1235678999988777765    35667799999994 33333455678999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.+.+++..
T Consensus       198 al~~l~~~l  206 (293)
T PRK05866        198 ALSAVSRVI  206 (293)
T ss_pred             HHHHHHHHH
Confidence            999877654

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.80  E-value=8.3e-19  Score=138.86  Aligned_cols=121  Identities=26%  Similarity=0.309  Sum_probs=104.3

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEccccCC--
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFG--  133 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~~--  133 (198)
                      +|||||++|.+|..|++.|. .+++|+.++|..                +|++|++.+.++++  ++|+|||+|+...  
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD   64 (281)
T COG1091           2 KILITGANGQLGTELRRALP-GEFEVIATDRAE----------------LDITDPDAVLEVIRETRPDVVINAAAYTAVD   64 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------ccccChHHHHHHHHhhCCCEEEECccccccc
Confidence            49999999999999999999 678999999863                69999999999997  5799999999653  


Q ss_pred             ----CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccC----------CCCCCcchHHHHHHHHHHHHHhhCCC
Q 029125          134 ----SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFG----------VANYLLQGYYEGKRAAETELLTRYPY  196 (198)
Q Consensus       134 ----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~----------~~~~~~~~Y~~sK~~~e~~l~~~~~~  196 (198)
                          .++..|.+|..++.+++++|.+.|. .+||+|| .+|+          +.+.|.+.||.||+++|..+++++++
T Consensus        65 ~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~~~  141 (281)
T COG1091          65 KAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAGPR  141 (281)
T ss_pred             cccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHhCCC
Confidence                3356789999999999999999987 7999998 6653          23567889999999999999988654

>PLN02253 xanthoxin dehydrogenase

Probab=99.80  E-value=1.8e-18  Score=138.61  Aligned_cols=140  Identities=16%  Similarity=0.161  Sum_probs=107.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--c--cCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D--SWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~--~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+......  .  ....++.++.+|++|.+++.++++       ++
T Consensus        16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i   95 (280)
T PLN02253         16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL   95 (280)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            456899999999999999999999999999999987532110  1  112468899999999999888775       68


Q ss_pred             CEEEEccccCCC------------CccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          123 TAVISCVGGFGS------------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       123 d~vi~~ag~~~~------------~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      |+||||||....            +...+++|+.+++++++++..    .+.++++++||.....+.+....|+.+|++.
T Consensus        96 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~  175 (280)
T PLN02253         96 DIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAV  175 (280)
T ss_pred             CEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHHHHH
Confidence            999999986421            234688999999988887753    3446899998843222334456899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      |.+++..
T Consensus       176 ~~~~~~l  182 (280)
T PLN02253        176 LGLTRSV  182 (280)
T ss_pred             HHHHHHH
Confidence            9988764

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.80  E-value=6.1e-19  Score=138.94  Aligned_cols=140  Identities=19%  Similarity=0.166  Sum_probs=107.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---ccCCCCeEEEEccCCCHHHHHHHhcC--------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALDG--------V  122 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~--------~  122 (198)
                      .++++++||||+|+||+++++.|+++|++|+++.++......   .....++.++.+|+.|++++.+++++        +
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i   82 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPI   82 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            356799999999999999999999999999887654322111   11124678899999999988877652        8


Q ss_pred             CEEEEccccCC----------------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHH
Q 029125          123 TAVISCVGGFG----------------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEG  182 (198)
Q Consensus       123 d~vi~~ag~~~----------------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~s  182 (198)
                      |++|||+|...                .+...+++|+.+..++++++.    +.+.++|+++||..+..+..+...|+.+
T Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  162 (253)
T PRK08642         83 TTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTA  162 (253)
T ss_pred             eEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchHHH
Confidence            99999998521                012357899999999998885    3455799999996555555667799999


Q ss_pred             HHHHHHHHHhh
Q 029125          183 KRAAETELLTR  193 (198)
Q Consensus       183 K~~~e~~l~~~  193 (198)
                      |++.|.+++..
T Consensus       163 K~a~~~l~~~l  173 (253)
T PRK08642        163 KAALLGLTRNL  173 (253)
T ss_pred             HHHHHHHHHHH
Confidence            99999998875

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=1.1e-18  Score=137.81  Aligned_cols=138  Identities=17%  Similarity=0.176  Sum_probs=106.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      +|+++||||+|+||.+++++|+++|++|++++|+..+...      .....++.++.+|++|++++.++++       .+
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            4689999999999999999999999999999987543211      1123468899999999988777654       58


Q ss_pred             CEEEEccccCC------------CCccceehhhHHHHHHHHHHHHc-----C-----CCEEEEeeccccCCCCCCcchHH
Q 029125          123 TAVISCVGGFG------------SNSYMYKINGTANINAIRAASEK-----G-----VKRFVYISAADFGVANYLLQGYY  180 (198)
Q Consensus       123 d~vi~~ag~~~------------~~~~~~~~n~~~~~~~~~a~~~~-----~-----~~~~v~~Ss~~~~~~~~~~~~Y~  180 (198)
                      |+||||+|...            .++..+++|+.++.++++++...     +     .++|+++||.....+..+...|+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC  161 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence            99999998532            12345789999999988887432     1     45799999954444455667899


Q ss_pred             HHHHHHHHHHHhh
Q 029125          181 EGKRAAETELLTR  193 (198)
Q Consensus       181 ~sK~~~e~~l~~~  193 (198)
                      .+|.+.|.+++..
T Consensus       162 ~sK~a~~~~~~~l  174 (256)
T PRK12745        162 ISKAGLSMAAQLF  174 (256)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988765

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.79  E-value=7.8e-19  Score=139.08  Aligned_cols=138  Identities=17%  Similarity=0.066  Sum_probs=105.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--cc--CCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DS--WANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~--~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      +++|+||||+|+||.+++++|+++|++|++++|+.+....  ..  ...++.++.+|++|++++.++++       .+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            4789999999999999999999999999999997543111  10  11268899999999998887765       3799


Q ss_pred             EEEccccCCC-----------CccceehhhHHHHHHHH----HHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          125 VISCVGGFGS-----------NSYMYKINGTANINAIR----AASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       125 vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~----a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      +|||+|....           +...+++|+.++.++++    .+.+.+.++||++||...-.+.+....|+.+|++.+.+
T Consensus        82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  161 (257)
T PRK07024         82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKY  161 (257)
T ss_pred             EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHHH
Confidence            9999985421           12357899999987666    44556677999999954333445567899999999988


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      ++..
T Consensus       162 ~~~l  165 (257)
T PRK07024        162 LESL  165 (257)
T ss_pred             HHHH
Confidence            7653

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.2e-18  Score=136.15  Aligned_cols=139  Identities=12%  Similarity=0.082  Sum_probs=107.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      ++++++||||+|+||.+++++|+++|++|++++|++++...     .....++.++.+|++|++++.++++       ++
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL   84 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            46799999999999999999999999999999997643211     1113467889999999998887765       58


Q ss_pred             CEEEEccccCCC-----------CccceehhhHHHHHHHHHH----HHcCCCEEEEeecc-ccCCCCCCcchHHHHHHHH
Q 029125          123 TAVISCVGGFGS-----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAA-DFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       123 d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~-~~~~~~~~~~~Y~~sK~~~  186 (198)
                      |++|||||....           +...+++|+.+++.+++++    .+.+.++||++||. .+..+.+....|+.+|++.
T Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~  164 (254)
T PRK07478         85 DIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGL  164 (254)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHHHHH
Confidence            999999996421           2445789999888776654    44556789999994 3434556678999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       165 ~~~~~~l  171 (254)
T PRK07478        165 IGLTQVL  171 (254)
T ss_pred             HHHHHHH
Confidence            9887764

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.79  E-value=5.3e-19  Score=143.06  Aligned_cols=119  Identities=23%  Similarity=0.207  Sum_probs=96.7

Q ss_pred             EEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEccccCC----
Q 029125           60 LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFG----  133 (198)
Q Consensus        60 lvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~~----  133 (198)
                      |||||+||||++|++.|+++|++|+++.+.               ..+|++|.+++.++++  ++|+|||+|+...    
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~   65 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHA   65 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccch
Confidence            699999999999999999999988876532               1479999999999887  5799999998532    


Q ss_pred             ---CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC--------------CCCcc-hHHHHHHHHHHHHHhh
Q 029125          134 ---SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA--------------NYLLQ-GYYEGKRAAETELLTR  193 (198)
Q Consensus       134 ---~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~--------------~~~~~-~Y~~sK~~~e~~l~~~  193 (198)
                         .+...+++|+.++.+++++|++.++++|||+|| .+|+..              ..+.+ .|+.+|.++|++++.+
T Consensus        66 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~  144 (306)
T PLN02725         66 NMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAY  144 (306)
T ss_pred             hhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHH
Confidence               234567899999999999999999999999999 566632              11222 4999999999888765

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.79  E-value=2e-18  Score=134.77  Aligned_cols=141  Identities=23%  Similarity=0.273  Sum_probs=112.6

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc----ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      .+.++++|+||||+||||+||+.+|..+|++|++++.-......    ....++++.+..|+..     .++.++|.|||
T Consensus        23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~-----pl~~evD~Iyh   97 (350)
T KOG1429|consen   23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVE-----PLLKEVDQIYH   97 (350)
T ss_pred             cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechh-----HHHHHhhhhhh
Confidence            44567999999999999999999999999999999975443221    1224567788778754     47889999999


Q ss_pred             ccccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC---------------CCCcchHHHHHHH
Q 029125          128 CVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA---------------NYLLQGYYEGKRA  185 (198)
Q Consensus       128 ~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~---------------~~~~~~Y~~sK~~  185 (198)
                      .|++.+      .+-..+..|+.++++++..|++-+ +||++.|| .+||.+               ..+.++|...|..
T Consensus        98 LAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~  176 (350)
T KOG1429|consen   98 LAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRV  176 (350)
T ss_pred             hccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHH
Confidence            998654      345678899999999999999887 69999998 678864               2446789999999


Q ss_pred             HHHHHHhhCCCCC
Q 029125          186 AETELLTRYPYGG  198 (198)
Q Consensus       186 ~e~~l~~~~~~~g  198 (198)
                      +|.++..+....|
T Consensus       177 aE~L~~~y~k~~g  189 (350)
T KOG1429|consen  177 AETLCYAYHKQEG  189 (350)
T ss_pred             HHHHHHHhhcccC
Confidence            9999999876543

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.79  E-value=1.3e-18  Score=136.08  Aligned_cols=138  Identities=16%  Similarity=0.151  Sum_probs=105.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEEEc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVISC  128 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~  128 (198)
                      +|+++||||+|+||++++++|+++|++|++++|++.+........++.++.+|+.|.+++.++++       ++|++|||
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~   81 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN   81 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence            57899999999999999999999999999999976542221112346889999999988876654       48999999


Q ss_pred             cccCC----------CCccceehhhHHHHHHHHHHHH----cC--CCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          129 VGGFG----------SNSYMYKINGTANINAIRAASE----KG--VKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       129 ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~--~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      +|...          .++..+++|+.+++.+.+.+..    .+  .++||++||.....+.+....|+.+|++.+.+++.
T Consensus        82 ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~l~~~  161 (236)
T PRK06483         82 ASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLS  161 (236)
T ss_pred             CccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHHHHHH
Confidence            98532          1244578899998876666643    33  45899999965444555677899999999998886


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       162 ~  162 (236)
T PRK06483        162 F  162 (236)
T ss_pred             H
Confidence            5

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.79  E-value=1.1e-18  Score=137.22  Aligned_cols=139  Identities=15%  Similarity=0.095  Sum_probs=105.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEe-ecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASL-SRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l-~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .+++++||||+|+||++++++|+++|++|+++ .|+..+...     .....++.++.+|++|++++..+++       +
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35799999999999999999999999998774 565432110     1123467889999999998887775       4


Q ss_pred             CCEEEEccccCCC----------CccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|+|||++|....          +...+.+|+.++.++++++.+    .+.++||++||.....+.++...|+.+|++.|
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~  162 (250)
T PRK08063         83 LDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALE  162 (250)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHHHH
Confidence            8999999985321          122467999999988888754    45569999999544445566779999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       163 ~~~~~~  168 (250)
T PRK08063        163 ALTRYL  168 (250)
T ss_pred             HHHHHH
Confidence            988764

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.79  E-value=8.8e-19  Score=138.87  Aligned_cols=138  Identities=16%  Similarity=0.103  Sum_probs=106.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---ccCCCCeEEEEccCCCHHHHHHHhc--------CCCE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD--------GVTA  124 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~--------~~d~  124 (198)
                      ||+++||||+|+||++++++|+++|++|++++|+.+....   .....++.++.+|++|.+++.++++        ++|+
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            5789999999999999999999999999999987654211   1113468899999999988877654        4699


Q ss_pred             EEEccccCCC----------CccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          125 VISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       125 vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      ||||+|....          ++..+++|+.++..+++++.    ..+.++||++||.....+......|+.+|++.+.++
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~  160 (260)
T PRK08267         81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLT  160 (260)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHHH
Confidence            9999996431          24467899999998888874    345679999999432233455678999999998877


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       161 ~~l  163 (260)
T PRK08267        161 EAL  163 (260)
T ss_pred             HHH
Confidence            654

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.79  E-value=2.3e-18  Score=135.29  Aligned_cols=140  Identities=18%  Similarity=0.105  Sum_probs=109.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++++|+||||+|++|.+++++|+++|++|++++|+..+...     .....++.++.+|+.|++++.++++       .
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            356799999999999999999999999999999998543111     1112458899999999998888775       5


Q ss_pred             CCEEEEccccCCC----------CccceehhhHHHHHHHHHHH----HcCCCEEEEeeccc-cCCCCCCcchHHHHHHHH
Q 029125          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAAD-FGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~-~~~~~~~~~~Y~~sK~~~  186 (198)
                      +|+|||++|....          +...+++|+.++.++++++.    +.+.++||++||.. ++.+.+....|+.+|.+.
T Consensus        84 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~a~  163 (251)
T PRK12826         84 LDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGL  163 (251)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHHHH
Confidence            8999999986432          23457789999998888873    45677999999943 324556677899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       164 ~~~~~~~  170 (251)
T PRK12826        164 VGFTRAL  170 (251)
T ss_pred             HHHHHHH
Confidence            9888764

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.3e-18  Score=139.85  Aligned_cols=140  Identities=16%  Similarity=0.080  Sum_probs=104.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------cc-CCCCeEEEEccCCCHHHHHHHhc------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DS-WANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~-~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      .++++|+||||+|+||.+++++|+++|++|++++|+..+...      .. ...++.++.+|++|.+++.++++      
T Consensus        14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            467899999999999999999999999999999997543111      10 12467899999999998887654      


Q ss_pred             -CCCEEEEccccCC--------CCccceehhhHHHHH----HHHHHHHcCCCEEEEeeccc-c--CC----------CCC
Q 029125          121 -GVTAVISCVGGFG--------SNSYMYKINGTANIN----AIRAASEKGVKRFVYISAAD-F--GV----------ANY  174 (198)
Q Consensus       121 -~~d~vi~~ag~~~--------~~~~~~~~n~~~~~~----~~~a~~~~~~~~~v~~Ss~~-~--~~----------~~~  174 (198)
                       ++|+||||||...        .++..+.+|+.+++.    +++.+++.+.++||++||.. +  +.          +..
T Consensus        94 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~  173 (306)
T PRK06197         94 PRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYN  173 (306)
T ss_pred             CCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCC
Confidence             5899999998532        234567899999654    44445555567999999843 2  21          123


Q ss_pred             CcchHHHHHHHHHHHHHhh
Q 029125          175 LLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       175 ~~~~Y~~sK~~~e~~l~~~  193 (198)
                      +...|+.||++.+.+.++.
T Consensus       174 ~~~~Y~~SK~a~~~~~~~l  192 (306)
T PRK06197        174 RVAAYGQSKLANLLFTYEL  192 (306)
T ss_pred             cHHHHHHHHHHHHHHHHHH
Confidence            4568999999999877754

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.6e-18  Score=134.67  Aligned_cols=140  Identities=15%  Similarity=0.145  Sum_probs=110.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++++++||||+|+||+++++.|+++|++|+++.|+......      .....++.++.+|++|.+++.++++       
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG   82 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            456899999999999999999999999999888775432110      1123468899999999998888776       


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      ++|+||||+|...          .++..+++|+.++.++++++.+.  ..++|+++||..+..+.++...|+.+|.+.+.
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~  162 (245)
T PRK12937         83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAAVEG  162 (245)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCCchhHHHHHHHHH
Confidence            5899999999642          12345789999999989888653  23589999996666666777899999999999


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       163 ~~~~~  167 (245)
T PRK12937        163 LVHVL  167 (245)
T ss_pred             HHHHH
Confidence            88764

>PRK08264 short chain dehydrogenase; Validated

Probab=99.79  E-value=2.8e-18  Score=134.14  Aligned_cols=137  Identities=22%  Similarity=0.142  Sum_probs=108.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc---CCCEEEEccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD---GVTAVISCVG  130 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~vi~~ag  130 (198)
                      .+++++||||+|+||+++++.|+++|+ +|++++|+.++...  ...++.++.+|+.|.+++.++++   .+|+|||++|
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag   82 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAG   82 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            467999999999999999999999998 99999997654322  34578999999999999888776   4899999999


Q ss_pred             cCC-----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          131 GFG-----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       131 ~~~-----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ...           .+...+++|+.++.++++++.    +.+.++|+++||...-.+..+...|+.+|.+.|.+++..
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l  160 (238)
T PRK08264         83 IFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQAL  160 (238)
T ss_pred             cCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHHHHHHHHHHH
Confidence            721           113456789999998888864    345678999999433334456678999999999877754

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.4e-18  Score=135.05  Aligned_cols=138  Identities=16%  Similarity=0.108  Sum_probs=107.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHHHHHHHhcC----CCEEEEccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALDG----VTAVISCVG  130 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~----~d~vi~~ag  130 (198)
                      +++++||||+|+||.+++++|+++|++|++++|++..... .....++.++.+|++|.+++.+++++    +|.+|||+|
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag   80 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG   80 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence            4789999999999999999999999999999997543211 11124688999999999999988864    689999998


Q ss_pred             cCCC----------CccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          131 GFGS----------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       131 ~~~~----------~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ....          ++..+++|+.++.++++++...  ..++++++||.....+.+....|+.+|++.+.+++..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l  155 (240)
T PRK06101         81 DCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTL  155 (240)
T ss_pred             ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHH
Confidence            5321          2346889999999999998753  2358999998543344456678999999999987653

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.79  E-value=2.2e-18  Score=136.86  Aligned_cols=139  Identities=22%  Similarity=0.208  Sum_probs=106.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v  125 (198)
                      ++++++||||+|+||.+++++|+++|++|++++|+......  .....++.++.+|+.|.+++.++++       ++|++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   83 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL   83 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            56899999999999999999999999999999987543111  1123457889999999888776664       57999


Q ss_pred             EEccccCC---------------CCccceehhhHHHHHHHHHHHHc---CCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          126 ISCVGGFG---------------SNSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       126 i~~ag~~~---------------~~~~~~~~n~~~~~~~~~a~~~~---~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      |||||...               .|+..+++|+.+++.+++++...   ..+++|++||...-.+......|+.+|++.+
T Consensus        84 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  163 (262)
T TIGR03325        84 IPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTAAKHAVV  163 (262)
T ss_pred             EECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCCCchhHHHHHHHH
Confidence            99998531               13456899999999999888542   2257888888432233445668999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       164 ~l~~~l  169 (262)
T TIGR03325       164 GLVKEL  169 (262)
T ss_pred             HHHHHH
Confidence            988765

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.79  E-value=2.2e-18  Score=135.87  Aligned_cols=137  Identities=18%  Similarity=0.122  Sum_probs=105.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS  127 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~  127 (198)
                      |+|+||||+|+||.+++++|+++|++|++++|++.+...  .....++.++.+|++|.+++.++++       ++|+|||
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            579999999999999999999999999999997643211  1113468899999999988877664       6899999


Q ss_pred             ccccCC-----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          128 CVGGFG-----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       128 ~ag~~~-----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      ++|...           .+...+++|+.++..+++.+    .+.+.++||++||.....+..+...|+.+|.+.+.+.+.
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~  160 (248)
T PRK10538         81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN  160 (248)
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHHHHHH
Confidence            998532           12345788999977666665    455677999999954334455667899999999988765


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       161 l  161 (248)
T PRK10538        161 L  161 (248)
T ss_pred             H
Confidence            4

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.7e-18  Score=138.31  Aligned_cols=138  Identities=14%  Similarity=0.085  Sum_probs=105.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc-cCCCCeEEEEccCCCHHHHHHHhc-------CCCEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-SWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi  126 (198)
                      ++++++||||+|+||++++++|+++|++|++++|+++..... .....+.++.+|++|++++.++++       ++|++|
T Consensus         4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (273)
T PRK07825          4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV   83 (273)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            467999999999999999999999999999999875432111 011257889999999988766554       579999


Q ss_pred             EccccCCC----------CccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          127 SCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       127 ~~ag~~~~----------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      ||+|....          +...+++|+.++..+++++    .+.+.++||++||.....+.+....|+.+|++.+.+.+.
T Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~  163 (273)
T PRK07825         84 NNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDA  163 (273)
T ss_pred             ECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHHHHHHHH
Confidence            99996431          2345789999988777665    456677999999964444556678899999988876554

>PRK09135 pteridine reductase; Provisional

Probab=99.79  E-value=1.9e-18  Score=135.57  Aligned_cols=139  Identities=19%  Similarity=0.142  Sum_probs=106.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-------ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-------~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      +.++|+||||+|+||++++++|+++|++|++++|+.....+       ......+.++.+|++|.+++..+++       
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            45789999999999999999999999999999986432111       1112357899999999998887776       


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHHc---CCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~---~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      ++|+|||++|...          .++..+++|+.++.++++++...   ..+.++++++.....+.++...|+.+|+++|
T Consensus        85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~  164 (249)
T PRK09135         85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKAALE  164 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCchhHHHHHHHHH
Confidence            4799999998532          12346779999999999998542   2346777766433455667789999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       165 ~~~~~l  170 (249)
T PRK09135        165 MLTRSL  170 (249)
T ss_pred             HHHHHH
Confidence            988765

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.79  E-value=2.4e-18  Score=135.96  Aligned_cols=140  Identities=11%  Similarity=0.108  Sum_probs=107.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---ccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      .++|+++||||+++||++++++|+++|++|++++|+..+...   .....++.++.+|++|.+++.++++       ++|
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD   85 (251)
T PRK12481          6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID   85 (251)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            357899999999999999999999999999999886432111   1123468889999999999887765       589


Q ss_pred             EEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cC-CCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          124 AVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      ++|||+|...          .|+..+++|+.+++.+.+++..    .+ .++||++||...-.+......|+.+|++.+.
T Consensus        86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~~~  165 (251)
T PRK12481         86 ILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMG  165 (251)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHHHH
Confidence            9999999532          2455689999999888887643    33 3689999994322334455689999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +.+..
T Consensus       166 l~~~l  170 (251)
T PRK12481        166 LTRAL  170 (251)
T ss_pred             HHHHH
Confidence            87754

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.78  E-value=3.8e-18  Score=136.50  Aligned_cols=139  Identities=13%  Similarity=0.121  Sum_probs=108.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------------ccCCCCeEEEEccCCCHHHHHHHhc--
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------------DSWANNVIWHQGNLLSSDSWKEALD--  120 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------------~~~~~~~~~~~~D~~d~~~~~~~~~--  120 (198)
                      ++++++||||+|+||.++++.|+++|++|++++|+......            .....++.++.+|++|++++..+++  
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   84 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA   84 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            56799999999999999999999999999999997543110            0123467889999999998887765  


Q ss_pred             -----CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCC--CCcchH
Q 029125          121 -----GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVAN--YLLQGY  179 (198)
Q Consensus       121 -----~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~--~~~~~Y  179 (198)
                           ++|+||||+|...          .+...+++|+.+++++++++..    .+..+++++||.....+.  ++...|
T Consensus        85 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y  164 (273)
T PRK08278         85 VERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAY  164 (273)
T ss_pred             HHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCcchh
Confidence                 6899999999532          1244577999999999999853    334589999985433333  566899


Q ss_pred             HHHHHHHHHHHHhh
Q 029125          180 YEGKRAAETELLTR  193 (198)
Q Consensus       180 ~~sK~~~e~~l~~~  193 (198)
                      +.+|++.|.+++..
T Consensus       165 ~~sK~a~~~~~~~l  178 (273)
T PRK08278        165 TMAKYGMSLCTLGL  178 (273)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999988865

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2.9e-18  Score=136.22  Aligned_cols=140  Identities=14%  Similarity=0.122  Sum_probs=108.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc--cccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++++++||||+|+||++++++|+++|++|++++|+..+..  ......++.++.+|++|.+++.++++       .+|+
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   83 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI   83 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            35689999999999999999999999999999999864311  11123468899999999988877665       5799


Q ss_pred             EEEccccCC---------CCccceehhhHHHHHHHHHHHH---cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          125 VISCVGGFG---------SNSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       125 vi~~ag~~~---------~~~~~~~~n~~~~~~~~~a~~~---~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      +|||+|...         .+...+++|+.+++.+++++..   .+.++||++||.....+.+....|+.+|++.+.+++.
T Consensus        84 lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~~~~  163 (261)
T PRK08265         84 LVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRS  163 (261)
T ss_pred             EEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHHHHHHHH
Confidence            999998532         2345678899999988887653   3346899999954334445567899999999988775


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       164 l  164 (261)
T PRK08265        164 M  164 (261)
T ss_pred             H
Confidence            4

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.3e-18  Score=138.98  Aligned_cols=140  Identities=19%  Similarity=0.263  Sum_probs=108.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---c--cC--CCCeEEEEccCCCHHHHHHHhc------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SW--ANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---~--~~--~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      .++++++||||+|+||.++++.|+++|++|++++|+..+...   .  ..  ..++.++.+|+.|++++..+++      
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            346899999999999999999999999999999987543111   0  00  2467889999999998887765      


Q ss_pred             -CCCEEEEccccCCC-----------CccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHH
Q 029125          121 -GVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKR  184 (198)
Q Consensus       121 -~~d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~  184 (198)
                       ++|+|||++|....           +...+++|+.++..+++++.+    .+.++|+++||.....+.++...|+.+|+
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~  164 (276)
T PRK05875         85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKS  164 (276)
T ss_pred             CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHHHH
Confidence             68999999985321           234578899999988887644    34458999999544444556789999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.|.+++..
T Consensus       165 a~~~~~~~~  173 (276)
T PRK05875        165 AVDHLMKLA  173 (276)
T ss_pred             HHHHHHHHH
Confidence            999998865

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.78  E-value=1.6e-18  Score=137.14  Aligned_cols=140  Identities=14%  Similarity=0.131  Sum_probs=109.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++++++||||+|+||.++++.|+++|++|++++|+......  .....++.++.+|++|.+++..+++       ++|+
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            346799999999999999999999999999999997653211  1123458889999999998887765       5899


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHHHHc----C-CCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAASEK----G-VKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~----~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      +|||+|...          .++..+++|+.+++++++++...    + ..+||++||.....+.++...|+.+|++.+.+
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  163 (257)
T PRK07067         84 LFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISY  163 (257)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHHHHHH
Confidence            999998542          23455789999999999988542    1 24899999954344456778999999999988


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      ++..
T Consensus       164 ~~~l  167 (257)
T PRK07067        164 TQSA  167 (257)
T ss_pred             HHHH
Confidence            7754

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.78  E-value=2.8e-18  Score=134.95  Aligned_cols=139  Identities=21%  Similarity=0.196  Sum_probs=107.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      ++++++||||+|+||++++++|+++|++|++++|+......     .....++.++.+|+.|.+++.++++       ++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999987543211     1113468899999999998887765       58


Q ss_pred             CEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      |+|||++|...          .+...+++|+.+++++++++.    +.+.++|+++||.....+......|+.+|++.+.
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~~  161 (250)
T TIGR03206        82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVA  161 (250)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHHHH
Confidence            99999998532          123457899999998888774    4566799999995433344556789999999888


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       162 ~~~~l  166 (250)
T TIGR03206       162 FSKTM  166 (250)
T ss_pred             HHHHH
Confidence            77754

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.78  E-value=4e-18  Score=135.02  Aligned_cols=140  Identities=17%  Similarity=0.090  Sum_probs=105.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      ..+|+++||||+|+||.+++++|+++|++|+++.++......      .....++.++.+|++|.+++.++++       
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            456799999999999999999999999999988775332111      1113468889999999998887765       


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHHc----CCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK----GVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~----~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      ++|+||||+|...          .+...+++|+.+++++++++...    ..+++++++|.....+.+....|+.+|.+.
T Consensus        87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a~  166 (258)
T PRK09134         87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAAL  166 (258)
T ss_pred             CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHHHH
Confidence            4799999998532          12446789999999999887542    345888888743223344456899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      |.+.+..
T Consensus       167 ~~~~~~l  173 (258)
T PRK09134        167 WTATRTL  173 (258)
T ss_pred             HHHHHHH
Confidence            9888764

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.78  E-value=3.8e-18  Score=135.53  Aligned_cols=140  Identities=16%  Similarity=0.171  Sum_probs=107.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++++++||||+|+||.+++++|+++|++|++++|+..+...  .....++.++.+|++|.+++..+++       .+|+
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            356899999999999999999999999999999997543111  1123467889999999988877664       5899


Q ss_pred             EEEccccCCC---------------CccceehhhHHHHHHHHHHHHc---CCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          125 VISCVGGFGS---------------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       125 vi~~ag~~~~---------------~~~~~~~n~~~~~~~~~a~~~~---~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      +|||+|....               |+..+++|+.+.+.+++++...   ..+++|++||...-.+......|+.+|++.
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~  163 (263)
T PRK06200         84 FVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYTASKHAV  163 (263)
T ss_pred             EEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCCchhHHHHHHH
Confidence            9999995321               3345789999999888887532   235899999844333444566899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       164 ~~~~~~l  170 (263)
T PRK06200        164 VGLVRQL  170 (263)
T ss_pred             HHHHHHH
Confidence            9988764

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.78  E-value=3.4e-18  Score=136.08  Aligned_cols=140  Identities=14%  Similarity=0.071  Sum_probs=107.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~------~  121 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+...      .....++.++.+|++|++++.++++      +
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~   85 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE   85 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence            357899999999999999999999999999999997543111      1113468899999999998887765      5


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|++|||+|...          .|+..+++|+.+.+.+.+++    ++.+.++||++||.....+.+....|+.+|.+.+
T Consensus        86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKaal~  165 (263)
T PRK08339         86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMA  165 (263)
T ss_pred             CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHHHHH
Confidence            899999998532          23456788988887666655    4455679999999654445555678999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+.+..
T Consensus       166 ~l~~~l  171 (263)
T PRK08339        166 GLVRTL  171 (263)
T ss_pred             HHHHHH
Confidence            877754

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.78  E-value=5.1e-18  Score=133.17  Aligned_cols=139  Identities=18%  Similarity=0.106  Sum_probs=107.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---------ccCCCCeEEEEccCCCHHHHHHHhc-----
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---------~~~~~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      ++++++||||+|+||++++++|+++|++|++++|.......         .....++.++.+|+.|.+++.++++     
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE   84 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46799999999999999999999999999998764322111         1113467899999999998887764     


Q ss_pred             --CCCEEEEccccCCC----------CccceehhhHHHHHHHHHHH-----HcCCCEEEEeeccccCCCCCCcchHHHHH
Q 029125          121 --GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS-----EKGVKRFVYISAADFGVANYLLQGYYEGK  183 (198)
Q Consensus       121 --~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~-----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK  183 (198)
                        ++|+|||++|....          +...+.+|+.++.++++++.     +.+.++||++||.....+..+...|+.+|
T Consensus        85 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK  164 (249)
T PRK12827         85 FGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASK  164 (249)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhHHHH
Confidence              58999999996431          23456899999999999987     45667999999954333455667899999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      ++.+.+++..
T Consensus       165 ~a~~~~~~~l  174 (249)
T PRK12827        165 AGLIGLTKTL  174 (249)
T ss_pred             HHHHHHHHHH
Confidence            9998877654

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.78  E-value=4.6e-18  Score=136.05  Aligned_cols=140  Identities=15%  Similarity=0.097  Sum_probs=106.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ..+++++||||+|+||++++++|+++|++|++++|+......     .....++.++.+|++|.+++.++++       +
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            456799999999999999999999999999999987533111     1112457888999999998887665       5


Q ss_pred             CCEEEEccccCCC----------CccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|+||||+|....          +...+++|+.++.++++.+.    +.+.++||++||.....+.+....|+.+|++.|
T Consensus        88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  167 (274)
T PRK07775         88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLE  167 (274)
T ss_pred             CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHHHH
Confidence            7999999985421          12345899999998888864    345568999999432233445678999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       168 ~l~~~~  173 (274)
T PRK07775        168 AMVTNL  173 (274)
T ss_pred             HHHHHH
Confidence            988765

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.78  E-value=1.2e-17  Score=132.81  Aligned_cols=136  Identities=16%  Similarity=0.135  Sum_probs=108.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi  126 (198)
                      .++++++||||+|+||.++++.|+++|++|++++|+.....    ..++.++.+|++|++++.++++       .+|+||
T Consensus         7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   82 (266)
T PRK06171          7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLV   82 (266)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45789999999999999999999999999999998765421    2467889999999998887665       579999


Q ss_pred             EccccCCC-------------------CccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHH
Q 029125          127 SCVGGFGS-------------------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGK  183 (198)
Q Consensus       127 ~~ag~~~~-------------------~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK  183 (198)
                      ||+|....                   ++..+++|+.+++.+++++..    .+.++||++||.....+......|+.+|
T Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  162 (266)
T PRK06171         83 NNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATK  162 (266)
T ss_pred             ECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCchhHHHH
Confidence            99985321                   133578999999988888754    3446899999954444455678999999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      ++.+.+++..
T Consensus       163 ~a~~~l~~~l  172 (266)
T PRK06171        163 AALNSFTRSW  172 (266)
T ss_pred             HHHHHHHHHH
Confidence            9999888765

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.78  E-value=3.1e-18  Score=134.25  Aligned_cols=140  Identities=14%  Similarity=0.066  Sum_probs=107.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++++++||||+|+||..++++|+++|++|++++|++++...     .....++.++.+|++|.+++..+++       +
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC   83 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999999999999999997643211     1113468899999999998877665       4


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|+|||++|...          .+...+.+|+.+++++++.+    .+.+.++||++||.....+..+...|+.+|.+.+
T Consensus        84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~  163 (241)
T PRK07454         84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALA  163 (241)
T ss_pred             CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHH
Confidence            899999998532          12345778999988877776    3445679999999543344556678999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+.+..
T Consensus       164 ~~~~~~  169 (241)
T PRK07454        164 AFTKCL  169 (241)
T ss_pred             HHHHHH
Confidence            877653

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.78  E-value=3.4e-18  Score=135.45  Aligned_cols=140  Identities=14%  Similarity=0.182  Sum_probs=107.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++++++||||+|+||.++++.|+++|++|++++|+..+...     .....++.++.+|++|++++.++++       +
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~   89 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH   89 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            457899999999999999999999999999999987543111     1112467889999999998866554       5


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHHHHc-----CCCEEEEeecc-cc-CCCC--CCcchHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK-----GVKRFVYISAA-DF-GVAN--YLLQGYYEG  182 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~-----~~~~~v~~Ss~-~~-~~~~--~~~~~Y~~s  182 (198)
                      +|+||||+|...          .+...+++|+.++.++++++...     +.++||++||. .+ +.+.  .+..+|+.+
T Consensus        90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~~s  169 (259)
T PRK08213         90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTS  169 (259)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHHHH
Confidence            899999998532          12345779999999999987544     56799999984 22 2222  245789999


Q ss_pred             HHHHHHHHHhh
Q 029125          183 KRAAETELLTR  193 (198)
Q Consensus       183 K~~~e~~l~~~  193 (198)
                      |++.|.+++..
T Consensus       170 Ka~~~~~~~~~  180 (259)
T PRK08213        170 KGAVINFTRAL  180 (259)
T ss_pred             HHHHHHHHHHH
Confidence            99999988865

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.78  E-value=3.2e-18  Score=134.77  Aligned_cols=140  Identities=14%  Similarity=0.074  Sum_probs=107.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc----ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      .++++++||||+|+||.+++++|+++|++|++++|+......    .....++.++.+|++|++++.++++       ++
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            356899999999999999999999999999999987543111    0113457899999999998887765       68


Q ss_pred             CEEEEccccCCC----------CccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       123 d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      |+|||++|....          +...+.+|+.++.++.+.+    ++.+.++|+++||.....+.....+|+.+|.+.+.
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~  162 (252)
T PRK06138         83 DVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIAS  162 (252)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHHHHH
Confidence            999999996421          1334789999987766655    45567899999995322344556789999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       163 ~~~~l  167 (252)
T PRK06138        163 LTRAM  167 (252)
T ss_pred             HHHHH
Confidence            88765

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=2.9e-18  Score=134.79  Aligned_cols=139  Identities=17%  Similarity=0.118  Sum_probs=108.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccC--CCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSW--ANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~--~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      ++++++||||+|+||.+++++|+++|++|++++|+..+...  ...  ..++.++.+|+.|++++..+++       ++|
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   83 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD   83 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            46799999999999999999999999999999998644211  100  2457899999999999987765       579


Q ss_pred             EEEEccccCCC-----------CccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          124 AVISCVGGFGS-----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       124 ~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      +|||++|....           +...+++|+.+++.+++.+.    +.+.++||++||.....+.++...|+.+|.+.+.
T Consensus        84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~~~~  163 (251)
T PRK07231         84 ILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVIT  163 (251)
T ss_pred             EEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHHHHH
Confidence            99999986321           23457889999887777764    3567899999995444456667889999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       164 ~~~~~  168 (251)
T PRK07231        164 LTKAL  168 (251)
T ss_pred             HHHHH
Confidence            77754

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.78  E-value=3e-18  Score=137.32  Aligned_cols=138  Identities=17%  Similarity=0.078  Sum_probs=104.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++++++||||+|+||++++++|+++|++|++++|+......     .....++.++.+|++|.+++.++++       +
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH   83 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            356899999999999999999999999999999987543111     0112357889999999998887765       4


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcC-CCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKG-VKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      +|+||||||...          .+...+++|+.++.++++++.    +.+ .++||++||...-.+.++...|+.+|.+.
T Consensus        84 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  163 (275)
T PRK05876         84 VDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGV  163 (275)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHHH
Confidence            799999999532          123457899999998888874    333 46899999954334556678899999985


Q ss_pred             HHHHH
Q 029125          187 ETELL  191 (198)
Q Consensus       187 e~~l~  191 (198)
                      +.+.+
T Consensus       164 ~~~~~  168 (275)
T PRK05876        164 VGLAE  168 (275)
T ss_pred             HHHHH
Confidence            55443

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.78  E-value=6.1e-18  Score=133.25  Aligned_cols=136  Identities=11%  Similarity=0.085  Sum_probs=108.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi  126 (198)
                      .++++++||||+|+||.+++++|+++|++|++++|+..    .....++.++.+|++|.+++.++++       .+|+||
T Consensus         6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (252)
T PRK08220          6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL----TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLV   81 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh----hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            35689999999999999999999999999999999751    1124568899999999998888775       379999


Q ss_pred             EccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          127 SCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       127 ~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      ||+|...          .+...+++|+.+...+++++.    +.+.++||++||.....+..+...|+.+|++.+.+++.
T Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~  161 (252)
T PRK08220         82 NAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKC  161 (252)
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHHHHHHHH
Confidence            9998642          123457899999998888874    34556899999954444556678899999999998865


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       162 l  162 (252)
T PRK08220        162 V  162 (252)
T ss_pred             H
Confidence            4

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.78  E-value=3.9e-18  Score=134.22  Aligned_cols=137  Identities=17%  Similarity=0.128  Sum_probs=105.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--c---cCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D---SWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~---~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++++++||||+|+||.+++++|+++|++|++++|+......  .   ....++.++.+|++|.+++.++++       +
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG   83 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            356899999999999999999999999999999997543111  0   112357789999999988877664       5


Q ss_pred             CCEEEEccccCCC-------------CccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHH
Q 029125          122 VTAVISCVGGFGS-------------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKR  184 (198)
Q Consensus       122 ~d~vi~~ag~~~~-------------~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~  184 (198)
                      +|+||||+|....             +...+++|+.++.++++++..    .+.++||++||...   ..+.+.|+.+|+
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~---~~~~~~Y~~sK~  160 (250)
T PRK07774         84 IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAA---WLYSNFYGLAKV  160 (250)
T ss_pred             CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccc---cCCccccHHHHH
Confidence            8999999996421             124578999999998888764    34569999999421   134568999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.|.+++..
T Consensus       161 a~~~~~~~l  169 (250)
T PRK07774        161 GLNGLTQQL  169 (250)
T ss_pred             HHHHHHHHH
Confidence            999988765

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.78  E-value=4.4e-18  Score=134.35  Aligned_cols=140  Identities=18%  Similarity=0.093  Sum_probs=108.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      ..+++++||||+|+||.+++++|+++|++|++++|+......  ......+.++.+|++|++++..+++       ++|+
T Consensus        13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            457899999999999999999999999999999997543111  1112356789999999998877764       5799


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      ||||+|...          .+...+++|+.+..++++++..    .+.++||++||.....+.+....|+.+|.+.+.++
T Consensus        93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~  172 (255)
T PRK06841         93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMT  172 (255)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHHHHHHHH
Confidence            999999642          1234578999999988888754    35679999999543334555678999999999877


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       173 ~~l  175 (255)
T PRK06841        173 KVL  175 (255)
T ss_pred             HHH
Confidence            754

>PRK06128 oxidoreductase; Provisional

Probab=99.78  E-value=5.6e-18  Score=137.32  Aligned_cols=140  Identities=14%  Similarity=0.067  Sum_probs=107.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc-c------ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-R------DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~-~------~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      .++|+++||||+|+||++++++|+++|++|++..++..... .      .....++.++.+|++|.+++.++++      
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999998876543211 0      1123467889999999988877664      


Q ss_pred             -CCCEEEEccccCC-----------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 -GVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 -~~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                       ++|+||||||...           .+...+++|+.+++++++++...  ..++||++||...-.+......|+.+|++.
T Consensus       133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~asK~a~  212 (300)
T PRK06128        133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTKAAI  212 (300)
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCchhHHHHHHHH
Confidence             5899999999531           23456889999999999998653  235899999954333445567899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       213 ~~~~~~l  219 (300)
T PRK06128        213 VAFTKAL  219 (300)
T ss_pred             HHHHHHH
Confidence            9888764

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.78  E-value=4.9e-18  Score=133.55  Aligned_cols=140  Identities=15%  Similarity=0.140  Sum_probs=107.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---ccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      .++|+|+||||+|+||.+++++|+++|++|++++|+......   .....++.++.+|++|.+++..+++       ++|
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            457899999999999999999999999999999986532111   1123468899999999998886654       589


Q ss_pred             EEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cC-CCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          124 AVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      +||||+|...          .++..+++|+.+..++++++..    .+ .++||++||...-.+......|+.+|++.+.
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  162 (248)
T TIGR01832        83 ILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGVAG  162 (248)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHHHH
Confidence            9999998642          2234578999999988888753    33 4689999994322334455689999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       163 ~~~~l  167 (248)
T TIGR01832       163 LTKLL  167 (248)
T ss_pred             HHHHH
Confidence            87765

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2.3e-18  Score=137.91  Aligned_cols=137  Identities=16%  Similarity=0.123  Sum_probs=105.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------c-cCCCCeEEEEccCCCHHHHHHHh-------cC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------D-SWANNVIWHQGNLLSSDSWKEAL-------DG  121 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~-~~~~~~~~~~~D~~d~~~~~~~~-------~~  121 (198)
                      +++++||||+|++|+++++.|+++|++|++++|+.+....      . ....++.++.+|++|++++.. +       .+
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~   81 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGR   81 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCC
Confidence            5689999999999999999999999999999987543111      0 012468899999999988765 3       35


Q ss_pred             CCEEEEccccCCC----------CccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|+||||+|....          +...+++|+.++.++++.+    ++.+.++||++||.....+.++...|+.+|.+.+
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~~~  161 (280)
T PRK06914         82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALE  161 (280)
T ss_pred             eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHHHH
Confidence            7999999985431          1234678999998888775    5566789999998544444566779999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       162 ~~~~~l  167 (280)
T PRK06914        162 GFSESL  167 (280)
T ss_pred             HHHHHH
Confidence            888764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.78  E-value=5.3e-18  Score=134.31  Aligned_cols=140  Identities=14%  Similarity=0.140  Sum_probs=107.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc-cc---ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS-LR---DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~-~~---~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      .++++|+||||+|+||.+++++|+++|++|++++|+.+.. ..   .....++.++.+|+.|.+++.++++       ++
T Consensus        13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   92 (258)
T PRK06935         13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI   92 (258)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999999873211 10   1123468899999999998887775       58


Q ss_pred             CEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      |++|||+|...          .++..+++|+.+...+.+++.    +.+.++||++||.....+.+....|+.+|++.+.
T Consensus        93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  172 (258)
T PRK06935         93 DILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAG  172 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHHHHH
Confidence            99999998532          123457889999887777664    4456799999995433344556789999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       173 ~~~~l  177 (258)
T PRK06935        173 LTKAF  177 (258)
T ss_pred             HHHHH
Confidence            88765

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.77  E-value=4.2e-18  Score=134.63  Aligned_cols=139  Identities=13%  Similarity=0.072  Sum_probs=108.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--c---cCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D---SWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~---~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      ++++|+||||+|+||++++++|+++|++|++++|++.....  .   ....++.++.+|++|.+++..+++       ++
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV   83 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence            46899999999999999999999999999999997643111  0   113467899999999988876654       57


Q ss_pred             CEEEEccccCCC-----------CccceehhhHHHHHHHHHHHHc---CCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          123 TAVISCVGGFGS-----------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       123 d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~~~---~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      |+|||++|....           +...+++|+.++..+++++...   ..++||++||.....+.++...|+.+|.+.+.
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~  163 (258)
T PRK07890         84 DALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALLA  163 (258)
T ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcchhHHHHHHHHH
Confidence            999999985321           2345789999999999988642   23589999995444455667899999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       164 l~~~~  168 (258)
T PRK07890        164 ASQSL  168 (258)
T ss_pred             HHHHH
Confidence            88765

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.77  E-value=7.5e-18  Score=133.31  Aligned_cols=140  Identities=14%  Similarity=0.075  Sum_probs=108.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc----ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      .++++++||||+|+||++++++|+++|++|++++|++.....    .....++.++.+|++|++++..+++       ++
T Consensus         5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (258)
T PRK08628          5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI   84 (258)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            456899999999999999999999999999999987654210    1123468899999999998887775       58


Q ss_pred             CEEEEccccCC---------CCccceehhhHHHHHHHHHHHH---cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          123 TAVISCVGGFG---------SNSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       123 d~vi~~ag~~~---------~~~~~~~~n~~~~~~~~~a~~~---~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      |+||||+|...         .+...+++|+.+..++.+.+.+   ...++|+++||.....+..+...|+.+|++.+.++
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~  164 (258)
T PRK08628         85 DGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGAQLALT  164 (258)
T ss_pred             CEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCchhHHHHHHHHHHH
Confidence            99999999532         1234578899999888887743   23468999999543344556779999999999988


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       165 ~~l  167 (258)
T PRK08628        165 REW  167 (258)
T ss_pred             HHH
Confidence            864

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.77  E-value=4.1e-18  Score=133.74  Aligned_cols=138  Identities=20%  Similarity=0.151  Sum_probs=106.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc----CCCEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD----GVTAV  125 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~----~~d~v  125 (198)
                      ||+++||||+|+||.+++++|+++|++|++++|++++...      .....++.++.+|++|++++.++++    .+|++
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v   80 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV   80 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence            5789999999999999999999999999999998643211      0112468899999999998887765    46999


Q ss_pred             EEccccCCCC----------ccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 029125          126 ISCVGGFGSN----------SYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       126 i~~ag~~~~~----------~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      ||++|.....          ...+++|+.++.++++++..    .+.++|+++||.....+.+....|+.+|++.+.+++
T Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  160 (243)
T PRK07102         81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLS  160 (243)
T ss_pred             EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHHHHH
Confidence            9999854211          23467899999988887643    466799999995433344556789999999998877


Q ss_pred             hh
Q 029125          192 TR  193 (198)
Q Consensus       192 ~~  193 (198)
                      ..
T Consensus       161 ~l  162 (243)
T PRK07102        161 GL  162 (243)
T ss_pred             HH
Confidence            64

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.77  E-value=3.9e-18  Score=136.32  Aligned_cols=137  Identities=15%  Similarity=0.073  Sum_probs=104.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEEEc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVISC  128 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~  128 (198)
                      ||+++||||+|+||.+++++|+++|++|++++|+..+... ....++.++.+|++|.+++.++++       ++|+||||
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~   79 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEA-LAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINN   79 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            5789999999999999999999999999999997543211 112357889999999988876653       58999999


Q ss_pred             cccCC----------CCccceehhhHHHHHHHHHHHH---cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          129 VGGFG----------SNSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       129 ag~~~----------~~~~~~~~n~~~~~~~~~a~~~---~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      +|...          .+...+++|+.++.++++++..   .+.+++|++||.....+.+....|+.+|.+.+.+++..
T Consensus        80 ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~l  157 (274)
T PRK05693         80 AGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDAL  157 (274)
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCccHHHHHHHHHHHHHHHH
Confidence            98532          1234578999999888888743   24468999998443334455678999999999877653

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.77  E-value=4.7e-18  Score=134.24  Aligned_cols=140  Identities=11%  Similarity=0.071  Sum_probs=108.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ..+++++||||+|+||.+++++|+++|++|++++|+..+...     .....++.++.+|++|.+++.++++       +
T Consensus         7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (254)
T PRK08085          7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP   86 (254)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            457899999999999999999999999999999997543111     0112357788999999998887664       4


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|+||||+|...          .|...+++|+.+++.+++++..    .+.++||++||.....+.+....|+.+|++.+
T Consensus        87 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  166 (254)
T PRK08085         87 IDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVK  166 (254)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHHHHH
Confidence            899999998532          2345678999999888887754    44579999999543344456678999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       167 ~~~~~l  172 (254)
T PRK08085        167 MLTRGM  172 (254)
T ss_pred             HHHHHH
Confidence            988875

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.77  E-value=4.3e-18  Score=134.30  Aligned_cols=135  Identities=14%  Similarity=0.121  Sum_probs=98.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      ..++++++||||+|+||++++++|+++|++|++++|+...............+.+|++|.+++.+.+.++|++|||||..
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~   90 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGIN   90 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCccC
Confidence            34568999999999999999999999999999999876221111111223678899999999999999999999999853


Q ss_pred             C-------CCccceehhhHHHHHHHHHHHHc-------CCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          133 G-------SNSYMYKINGTANINAIRAASEK-------GVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       133 ~-------~~~~~~~~n~~~~~~~~~a~~~~-------~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      .       ++...+++|+.++.++++++...       +...++..||.. +........|++||++.+.
T Consensus        91 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a-~~~~~~~~~Y~aSKaal~~  159 (245)
T PRK12367         91 PGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEA-EIQPALSPSYEISKRLIGQ  159 (245)
T ss_pred             CcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEeccc-ccCCCCCchhHHHHHHHHH
Confidence            2       23556899999999999887432       122343334422 2222345679999999754

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.77  E-value=4.9e-18  Score=134.04  Aligned_cols=139  Identities=19%  Similarity=0.140  Sum_probs=105.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEe-ecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc--------
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASL-SRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD--------  120 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l-~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~--------  120 (198)
                      ++++++||||+|+||.+++++|+++|++|+++ .|+..+...     ......+.++.+|++|.+++.++++        
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   84 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI   84 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence            45799999999999999999999999999876 454322110     1112457889999999998887765        


Q ss_pred             -----CCCEEEEccccCCC----------CccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHH
Q 029125          121 -----GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGK  183 (198)
Q Consensus       121 -----~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK  183 (198)
                           ++|+|||++|....          +...+++|+.++.++++++.+.  ..++||++||.....+.++...|+.+|
T Consensus        85 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~Y~~sK  164 (254)
T PRK12746         85 RVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGLSK  164 (254)
T ss_pred             ccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCCcchHhhH
Confidence                 48999999986421          1334679999999999988653  345899999854334556677899999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      .+.|.+++..
T Consensus       165 ~a~~~~~~~~  174 (254)
T PRK12746        165 GALNTMTLPL  174 (254)
T ss_pred             HHHHHHHHHH
Confidence            9999887654

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.77  E-value=7.4e-18  Score=137.85  Aligned_cols=113  Identities=14%  Similarity=0.112  Sum_probs=88.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---c--cCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---~--~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      ++++++||||+|+||.+++++|+++|++|++++|+..+...   .  ....++.++.+|++|.+++.++++       ++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            57899999999999999999999999999999987543111   0  112468899999999998887765       38


Q ss_pred             CEEEEccccCCC-----------CccceehhhHHHHHHHHHHHH----cC--CCEEEEeecc
Q 029125          123 TAVISCVGGFGS-----------NSYMYKINGTANINAIRAASE----KG--VKRFVYISAA  167 (198)
Q Consensus       123 d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~~----~~--~~~~v~~Ss~  167 (198)
                      |+||||||....           ++..+++|+.+++++++++..    .+  .+|||++||.
T Consensus        85 D~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~  146 (322)
T PRK07453         85 DALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTV  146 (322)
T ss_pred             cEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEccc
Confidence            999999995321           234578999999988888753    22  3599999984

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.8e-18  Score=135.57  Aligned_cols=140  Identities=16%  Similarity=0.118  Sum_probs=107.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc---CCCEEEEccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD---GVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~vi~~ag  130 (198)
                      .++++++||||+|+||.++++.|+++|++|++++|+.++........+..++.+|++|.+.+.++++   ++|+|||++|
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag   86 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAG   86 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCC
Confidence            3568999999999999999999999999999999975432111111246788999999998888776   4899999998


Q ss_pred             cCC----------CCccceehhhHHHHHHHHHHHHc----C-CCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          131 GFG----------SNSYMYKINGTANINAIRAASEK----G-VKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       131 ~~~----------~~~~~~~~n~~~~~~~~~a~~~~----~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ...          .+...+.+|+.+++++++++.+.    + .++||++||.....+......|+.+|.+.|.+++..
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~  164 (245)
T PRK07060         87 IASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVL  164 (245)
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHHHHHHHHHH
Confidence            642          12345679999999888887542    2 368999999543334456678999999999988765

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.77  E-value=8e-18  Score=132.33  Aligned_cols=138  Identities=20%  Similarity=0.140  Sum_probs=104.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------cc-CCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DS-WANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~-~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      +++++||||+|+||++++++|+++|++|++++|++.+...      .. ...++.++.+|++|++++.++++       +
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999998643111      00 12468899999999988876654       5


Q ss_pred             CCEEEEccccCCC----------CccceehhhHHHHHHHHHHH----HcCCCEEEEeeccc-cCCCCCCcchHHHHHHHH
Q 029125          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAAD-FGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~-~~~~~~~~~~Y~~sK~~~  186 (198)
                      +|++|||+|....          +...+++|+.+.+++++++.    +.+.++||++||.. ....+.+...|+.+|++.
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~  161 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGV  161 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHHH
Confidence            8999999985432          12356899999988887763    45677999999943 222222457899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       162 ~~~~~~l  168 (248)
T PRK08251        162 ASLGEGL  168 (248)
T ss_pred             HHHHHHH
Confidence            8877654

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.77  E-value=5.3e-18  Score=133.80  Aligned_cols=139  Identities=20%  Similarity=0.127  Sum_probs=103.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc--------
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD--------  120 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~--------  120 (198)
                      ++|+++||||+|+||.+++++|+++|++|+++.++......      ......+..+.+|++|.+++..+++        
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            46899999999999999999999999999887543221111      1112456788999999876654332        


Q ss_pred             -----CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHH
Q 029125          121 -----GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGK  183 (198)
Q Consensus       121 -----~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK  183 (198)
                           ++|+||||||...          .|+..+++|+.+++.+++++...  ..++||++||.....+.+....|+.+|
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  162 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTK  162 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCchhHHHHH
Confidence                 5899999999532          12455679999999988887553  235999999965444555667899999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      ++.+.+++..
T Consensus       163 aa~~~~~~~l  172 (252)
T PRK12747        163 GAINTMTFTL  172 (252)
T ss_pred             HHHHHHHHHH
Confidence            9999888764

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.77  E-value=5.5e-18  Score=132.53  Aligned_cols=139  Identities=15%  Similarity=0.091  Sum_probs=107.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      .+++|+||||+|+||.+++++|+++|++|++++|++.+...     .....++.++.+|+.|++++.++++       .+
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            35789999999999999999999999999999998654211     1123467889999999988877765       36


Q ss_pred             CEEEEccccCCC----------CccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       123 d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      |+|||++|....          +...++.|+.+..++++++.    +.+.++||++||.....+..+...|+.+|.+.+.
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~  163 (246)
T PRK05653         84 DILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIG  163 (246)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHHHHH
Confidence            999999986432          13457789999998888874    4567899999995433345566789999999888


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       164 ~~~~l  168 (246)
T PRK05653        164 FTKAL  168 (246)
T ss_pred             HHHHH
Confidence            77654

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.77  E-value=7.8e-18  Score=131.78  Aligned_cols=139  Identities=14%  Similarity=0.146  Sum_probs=108.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      ++++++||||+|+||.+++++|+++|++|++++|+..+..+     .....++.++.+|++|++++.++++       ++
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI   85 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence            45789999999999999999999999999999997543111     1113468889999999998888775       68


Q ss_pred             CEEEEccccCCC----------CccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       123 d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      |+|||++|....          +...+++|+.++.++++++.    +.+.+++|++||.....+..+...|+.+|.+.+.
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~  165 (239)
T PRK07666         86 DILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLG  165 (239)
T ss_pred             cEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHHHHH
Confidence            999999985321          13457899999988888775    3456789999995444445566789999999988


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       166 ~~~~~  170 (239)
T PRK07666        166 LTESL  170 (239)
T ss_pred             HHHHH
Confidence            87654

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.77  E-value=3.7e-18  Score=133.64  Aligned_cols=139  Identities=16%  Similarity=0.094  Sum_probs=107.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ++++|+||||+|+||++++++|+++|++|+++.|+......      .....++.++.+|+.|++++.++++       +
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   84 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence            45799999999999999999999999999887776543211      1123568899999999998887764       5


Q ss_pred             CCEEEEccccCCC----------CccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|+|||++|....          +...+++|+.+..++++.+    .+.+.++||++||.....+......|+.+|.+.+
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~~~  164 (249)
T PRK12825         85 IDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLV  164 (249)
T ss_pred             CCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHHHH
Confidence            7999999995321          1345678999999888887    4567889999999543334456678999999998


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       165 ~~~~~~  170 (249)
T PRK12825        165 GLTKAL  170 (249)
T ss_pred             HHHHHH
Confidence            877654

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.77  E-value=5.4e-18  Score=133.24  Aligned_cols=139  Identities=17%  Similarity=0.081  Sum_probs=105.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc--cccCCCCeEEEEccCCCHHHHHHHhc-------CCCEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v  125 (198)
                      ++++++||||+|+||++++++|+++|++|++++|+.....  ......++.++.+|++|.+++..+++       ++|+|
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4679999999999999999999999999999998753211  11123467889999999887765543       58999


Q ss_pred             EEccccCC----------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          126 ISCVGGFG----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       126 i~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      |||+|...          .+...+++|+.++.++++++...  ...++++++|.....+.+....|+.+|++.|.+++..
T Consensus        85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~~~~l  164 (249)
T PRK06500         85 FINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTL  164 (249)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCccHHHHHHHHHHHHHHHH
Confidence            99998532          12346789999999999999742  2357888887432223455679999999999988654

>PRK08589 short chain dehydrogenase; Validated

Probab=99.77  E-value=7.1e-18  Score=134.82  Aligned_cols=138  Identities=12%  Similarity=0.067  Sum_probs=105.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++|+++||||+|+||.+++++|+++|++|++++|+ +....     .....++.++.+|++|++++..+++       +
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            356899999999999999999999999999999997 32111     1113468899999999988877664       4


Q ss_pred             CCEEEEccccCCC-----------CccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          122 VTAVISCVGGFGS-----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       122 ~d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      +|++|||+|....           +...+++|+.+.+.+++++.    +.+ ++||++||.....+.+....|+.+|++.
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaal  161 (272)
T PRK08589         83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAV  161 (272)
T ss_pred             cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHHHH
Confidence            7999999986421           23456789999887777753    334 6999999954334445567899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       162 ~~l~~~l  168 (272)
T PRK08589        162 INFTKSI  168 (272)
T ss_pred             HHHHHHH
Confidence            9988765

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.3e-17  Score=132.07  Aligned_cols=139  Identities=20%  Similarity=0.194  Sum_probs=103.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCccc-------ccCCCCeEEEEccCCCHHHHHHHhc-----
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~-------~~~~~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      ...++|+||||+|+||++++++|+++| ++|++++|++++...       .....+++++.+|+.|.+++.++++     
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   85 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG   85 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence            356789999999999999999999995 999999998654111       1112368899999999887655443     


Q ss_pred             -CCCEEEEccccCCC----Cc------cceehhhHHHHH----HHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 -GVTAVISCVGGFGS----NS------YMYKINGTANIN----AIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 -~~d~vi~~ag~~~~----~~------~~~~~n~~~~~~----~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                       ++|++|||+|....    +.      ..+++|+.++..    +++.+.+.+.++|+++||.....+.++...|+.||++
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa  165 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAG  165 (253)
T ss_pred             CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHH
Confidence             69999999986532    11      247889988876    4555666777899999995322344556689999999


Q ss_pred             HHHHHHh
Q 029125          186 AETELLT  192 (198)
Q Consensus       186 ~e~~l~~  192 (198)
                      ...+.+.
T Consensus       166 ~~~~~~~  172 (253)
T PRK07904        166 LDGFYLG  172 (253)
T ss_pred             HHHHHHH
Confidence            8866544

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.77  E-value=9.8e-18  Score=132.58  Aligned_cols=140  Identities=17%  Similarity=0.145  Sum_probs=106.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++++++||||+|+||.+++++|+++|++|++++|+.+....      .....++.++.+|++|++++.++++       
T Consensus         6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   85 (254)
T PRK06114          6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG   85 (254)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999999987543111      1113467889999999988887665       


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccc--cCCCCCCcchHHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAAD--FGVANYLLQGYYEGKR  184 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~--~~~~~~~~~~Y~~sK~  184 (198)
                      .+|+||||+|...          .++..+++|+.+++.+++++.    +.+.++||++||..  .+.+......|+.+|+
T Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sKa  165 (254)
T PRK06114         86 ALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKA  165 (254)
T ss_pred             CCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHHHH
Confidence            4799999999643          234567899999987777753    34556999999843  2233334678999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.+.+++..
T Consensus       166 a~~~l~~~l  174 (254)
T PRK06114        166 GVIHLSKSL  174 (254)
T ss_pred             HHHHHHHHH
Confidence            999887754

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.77  E-value=5.5e-18  Score=133.51  Aligned_cols=138  Identities=19%  Similarity=0.172  Sum_probs=104.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHh-------cCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEAL-------DGVT  123 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~-------~~~d  123 (198)
                      +++++||||+|+||++++++|+++|++|++++|+......     .....++.++.+|+.|.+++.+++       .++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            4689999999999999999999999999999997543111     011346888999999998665544       4689


Q ss_pred             EEEEccccCCC----------CccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       124 ~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      +|||++|....          ++..+.+|+.++..+++++    ++.++++||++||.....+.+....|+.+|.+.+.+
T Consensus        81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~~  160 (255)
T TIGR01963        81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGL  160 (255)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHHH
Confidence            99999986431          1234568899988777776    456778999999843323445567899999999988


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      ++..
T Consensus       161 ~~~~  164 (255)
T TIGR01963       161 TKVL  164 (255)
T ss_pred             HHHH
Confidence            8654

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK08643 acetoin reductase; Validated

Probab=99.77  E-value=7.1e-18  Score=133.31  Aligned_cols=138  Identities=22%  Similarity=0.186  Sum_probs=104.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      +|+++||||+|+||.++++.|+++|++|++++|+......     .....++.++.+|++|++++.++++       ++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999987543111     1112467889999999998877665       589


Q ss_pred             EEEEccccCCC----------CccceehhhHHHHHHHHHHHH----cC-CCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       124 ~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~----~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      +||||+|....          ++..+++|+.++..+++++.+    .+ ..+||++||.....+.+....|+.+|++.+.
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  161 (256)
T PRK08643         82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRG  161 (256)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHHH
Confidence            99999986321          234578999998877777643    22 3589999985433344556789999999988


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       162 ~~~~l  166 (256)
T PRK08643        162 LTQTA  166 (256)
T ss_pred             HHHHH
Confidence            77654

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.77  E-value=6.8e-18  Score=132.68  Aligned_cols=139  Identities=14%  Similarity=0.098  Sum_probs=105.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc------cCCCCeEEEEccCCCHHHHHHHhcC-------
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD------SWANNVIWHQGNLLSSDSWKEALDG-------  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~------~~~~~~~~~~~D~~d~~~~~~~~~~-------  121 (198)
                      ++++++||||+|+||.+++++|+++|++|+++.++.....+.      ....++.++.+|++|++++.++++.       
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK   84 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999998776543221111      1124688899999999988877764       


Q ss_pred             CCEEEEccccCCC----------CccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|+||||+|....          +...+++|+.++.++++++..    .+.++||++||.....+..+...|+.+|.+.+
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  164 (247)
T PRK12935         85 VDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGML  164 (247)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHHHHH
Confidence            7999999986431          234578999999998888853    34568999999533334456779999999998


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       165 ~~~~~l  170 (247)
T PRK12935        165 GFTKSL  170 (247)
T ss_pred             HHHHHH
Confidence            877654

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.1e-17  Score=131.99  Aligned_cols=140  Identities=12%  Similarity=0.004  Sum_probs=107.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++++++||||+|+||.+++++|+++|++|++++|+..+...     ......+.++.+|+.|.+++.++++       .
T Consensus         6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK07035          6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR   85 (252)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            456899999999999999999999999999999997543111     0112357789999999988876654       4


Q ss_pred             CCEEEEccccCC-----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          122 VTAVISCVGGFG-----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       122 ~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      +|+|||++|...           .++..+++|+.++..+++++    .+.+.++++++||.....+.++.+.|+.+|++.
T Consensus        86 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~al  165 (252)
T PRK07035         86 LDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAV  165 (252)
T ss_pred             CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHHHH
Confidence            899999998532           12346789999998777776    444567999999854334556678899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       166 ~~~~~~l  172 (252)
T PRK07035        166 ISMTKAF  172 (252)
T ss_pred             HHHHHHH
Confidence            9988765

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.77  E-value=1.1e-17  Score=133.99  Aligned_cols=140  Identities=16%  Similarity=0.197  Sum_probs=106.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++++++||||+|+||++++++|+++|++|++++|+......     .....++.++.+|+.|.+++..+++       +
T Consensus         8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   87 (278)
T PRK08277          8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP   87 (278)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            356899999999999999999999999999999997543111     1112457889999999988877654       6


Q ss_pred             CCEEEEccccCCC-------------------------CccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCC
Q 029125          122 VTAVISCVGGFGS-------------------------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVA  172 (198)
Q Consensus       122 ~d~vi~~ag~~~~-------------------------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~  172 (198)
                      +|++|||+|....                         +...+++|+.+.+.+++++    .+.+.++||++||.....+
T Consensus        88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~  167 (278)
T PRK08277         88 CDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTP  167 (278)
T ss_pred             CCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCC
Confidence            8999999984321                         2345688999888666554    3445679999999544445


Q ss_pred             CCCcchHHHHHHHHHHHHHhh
Q 029125          173 NYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       173 ~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      .+....|+.+|++.+.+++..
T Consensus       168 ~~~~~~Y~~sK~a~~~l~~~l  188 (278)
T PRK08277        168 LTKVPAYSAAKAAISNFTQWL  188 (278)
T ss_pred             CCCCchhHHHHHHHHHHHHHH
Confidence            566778999999999988765

>PRK06196 oxidoreductase; Provisional

Probab=99.77  E-value=5e-18  Score=138.48  Aligned_cols=140  Identities=15%  Similarity=0.100  Sum_probs=104.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc-cCCCCeEEEEccCCCHHHHHHHhc-------CCCEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-SWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v  125 (198)
                      .++++|+||||+|+||.+++++|+++|++|++++|+.++..+. ....++.++.+|++|.+++.++++       ++|+|
T Consensus        24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l  103 (315)
T PRK06196         24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL  103 (315)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence            3568999999999999999999999999999999975432111 011247899999999998887663       58999


Q ss_pred             EEccccCC--------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeecccc--C----------CCCCCcchHHH
Q 029125          126 ISCVGGFG--------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADF--G----------VANYLLQGYYE  181 (198)
Q Consensus       126 i~~ag~~~--------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~--~----------~~~~~~~~Y~~  181 (198)
                      |||||...        .++..+++|+.++..+++.+    .+.+.++||++||...  +          .+..+...|+.
T Consensus       104 i~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~  183 (315)
T PRK06196        104 INNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQ  183 (315)
T ss_pred             EECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHHHHH
Confidence            99999642        23445789999987666654    4455579999998432  1          11223467999


Q ss_pred             HHHHHHHHHHhh
Q 029125          182 GKRAAETELLTR  193 (198)
Q Consensus       182 sK~~~e~~l~~~  193 (198)
                      ||.+.+.+++..
T Consensus       184 SK~a~~~~~~~l  195 (315)
T PRK06196        184 SKTANALFAVHL  195 (315)
T ss_pred             HHHHHHHHHHHH
Confidence            999999877644

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.76  E-value=1.2e-17  Score=132.06  Aligned_cols=140  Identities=14%  Similarity=0.150  Sum_probs=108.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++++|+||||+|+||.+++++|+++|++|++++|+......     .....++.++.+|++|.+++.++++       +
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   88 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK   88 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999999987543111     1112467889999999998877654       5


Q ss_pred             CCEEEEccccCCC---------CccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          122 VTAVISCVGGFGS---------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       122 ~d~vi~~ag~~~~---------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      +|++|||+|....         +...+++|+.+++++++++.    +.+.++||++||.....+..+...|+.+|++.+.
T Consensus        89 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  168 (255)
T PRK06113         89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASH  168 (255)
T ss_pred             CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHHHHH
Confidence            7999999985321         22347899999999998885    3345699999995544455667789999999999


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       169 ~~~~l  173 (255)
T PRK06113        169 LVRNM  173 (255)
T ss_pred             HHHHH
Confidence            88765

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.76  E-value=6.9e-18  Score=133.67  Aligned_cols=137  Identities=16%  Similarity=0.110  Sum_probs=102.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc-c---ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-R---DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~-~---~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      .++++++||||+|+||.+++++|+++|++|++++|+..... .   .....++.++.+|++|.+++.++++       ++
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI   85 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            35689999999999999999999999999999998742210 0   0112457789999999888776654       58


Q ss_pred             CEEEEccccCC-----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeecc-ccCCCCCCcchHHHHHHHH
Q 029125          123 TAVISCVGGFG-----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAA-DFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       123 d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~-~~~~~~~~~~~Y~~sK~~~  186 (198)
                      |++|||||...           .+...+++|+.++..+++.+    .+.+.++||++||. .++   .+..+|+.+|++.
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---~~~~~Y~~sK~a~  162 (260)
T PRK12823         86 DVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG---INRVPYSAAKGGV  162 (260)
T ss_pred             eEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC---CCCCccHHHHHHH
Confidence            99999998421           12344678888887555554    45566799999994 332   2446899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       163 ~~~~~~l  169 (260)
T PRK12823        163 NALTASL  169 (260)
T ss_pred             HHHHHHH
Confidence            9988765

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.76  E-value=7.1e-18  Score=137.56  Aligned_cols=140  Identities=15%  Similarity=0.086  Sum_probs=105.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccC-CCCeEEEEccCCCHHHHHHHhc------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSW-ANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~-~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      .++++++||||+++||.+++++|+++|++|++++|+..+...      ... ..++.++.+|+.|.++++++++      
T Consensus        12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~   91 (313)
T PRK05854         12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEG   91 (313)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999997543111      111 2358899999999998887664      


Q ss_pred             -CCCEEEEccccCCC---------CccceehhhHHHHHHHHHHHH---cCCCEEEEeeccc--cCC----------CCCC
Q 029125          121 -GVTAVISCVGGFGS---------NSYMYKINGTANINAIRAASE---KGVKRFVYISAAD--FGV----------ANYL  175 (198)
Q Consensus       121 -~~d~vi~~ag~~~~---------~~~~~~~n~~~~~~~~~a~~~---~~~~~~v~~Ss~~--~~~----------~~~~  175 (198)
                       .+|++|||||....         ++..+.+|+.+++.+.+.+..   .+..+||++||..  ++.          +..+
T Consensus        92 ~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~~  171 (313)
T PRK05854         92 RPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYAG  171 (313)
T ss_pred             CCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCcc
Confidence             48999999996431         234688999999877777642   2346899999843  221          1234


Q ss_pred             cchHHHHHHHHHHHHHhh
Q 029125          176 LQGYYEGKRAAETELLTR  193 (198)
Q Consensus       176 ~~~Y~~sK~~~e~~l~~~  193 (198)
                      ...|+.||.+.+.+.++.
T Consensus       172 ~~~Y~~SK~a~~~~~~~l  189 (313)
T PRK05854        172 MRAYSQSKIAVGLFALEL  189 (313)
T ss_pred             hhhhHHHHHHHHHHHHHH
Confidence            568999999999877654

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.76  E-value=6.7e-18  Score=133.69  Aligned_cols=138  Identities=16%  Similarity=0.152  Sum_probs=104.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccC-CCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSW-ANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~-~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      +++|+||||+|+||.++++.|+++|++|++++|+......      ... ...+.++.+|++|.+++..+++       .
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999987543111      001 1358899999999988876654       5


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cC-CCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      +|+||||+|...          .+...+++|+.++.++++++.+    .+ ..+||++||.....+.....+|+.+|++.
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~  161 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG  161 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHHH
Confidence            799999998532          1244568999998877777643    44 35899999854333345567899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       162 ~~l~~~l  168 (259)
T PRK12384        162 VGLTQSL  168 (259)
T ss_pred             HHHHHHH
Confidence            8887764

>PRK12742 oxidoreductase; Provisional

Probab=99.76  E-value=7.2e-18  Score=131.68  Aligned_cols=140  Identities=18%  Similarity=0.150  Sum_probs=105.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccccc-CCCCeEEEEccCCCHHHHHHHhc---CCCEEEEcc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS-WANNVIWHQGNLLSSDSWKEALD---GVTAVISCV  129 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~---~~d~vi~~a  129 (198)
                      .++++|+||||+|+||++++++|+++|++|+++.++.....+.. ...++.++.+|++|.+++.++++   ++|++|||+
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a   83 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA   83 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence            34689999999999999999999999999988876432211110 11246788899999988877665   489999999


Q ss_pred             ccCC----------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeecccc-CCCCCCcchHHHHHHHHHHHHHhh
Q 029125          130 GGFG----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADF-GVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       130 g~~~----------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~-~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      |...          .++..+++|+.+++.+++.+...  ..+++|++||... ..+.++...|+.+|++.|.+++..
T Consensus        84 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~~~~~l  160 (237)
T PRK12742         84 GIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGL  160 (237)
T ss_pred             CCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCCCcchHHhHHHHHHHHHHH
Confidence            8532          13456789999999887776543  3468999999533 345566789999999999888754

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.76  E-value=1.2e-17  Score=132.85  Aligned_cols=141  Identities=11%  Similarity=0.054  Sum_probs=108.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      ..++++++||||+|+||.+++++|+++|++|++++|+..+...     .....++.++.+|++|.+++.++++       
T Consensus         7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (265)
T PRK07097          7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVG   86 (265)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            3467899999999999999999999999999999887543111     1113468899999999998887765       


Q ss_pred             CCCEEEEccccCCC----------CccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 ~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      .+|+||||+|....          +...+.+|+.+.+.+++++.    +.+.++||++||.....+.+....|+.+|.+.
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal  166 (265)
T PRK07097         87 VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGL  166 (265)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHHHH
Confidence            48999999996431          23456789999887777764    34567999999954334455677899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       167 ~~l~~~l  173 (265)
T PRK07097        167 KMLTKNI  173 (265)
T ss_pred             HHHHHHH
Confidence            9888765

>PRK12743 oxidoreductase; Provisional

Probab=99.76  E-value=9.2e-18  Score=132.88  Aligned_cols=138  Identities=13%  Similarity=0.111  Sum_probs=106.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      +++++||||+|+||.+++++|+++|++|+++.++......      .....++.++.+|++|.+++..+++       .+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999988765433111      1123468899999999988777664       58


Q ss_pred             CEEEEccccCC----------CCccceehhhHHHHHHHHHHHHc----C-CCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK----G-VKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~----~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      |+||||+|...          .+...+.+|+.+...+++++...    + .++||++||.....+..+...|+.+|.+.+
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~  161 (256)
T PRK12743         82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALG  161 (256)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHHH
Confidence            99999998643          12345789999999999887542    2 358999999654455666789999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       162 ~l~~~l  167 (256)
T PRK12743        162 GLTKAM  167 (256)
T ss_pred             HHHHHH
Confidence            887754

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.76  E-value=9.7e-18  Score=131.76  Aligned_cols=139  Identities=18%  Similarity=0.149  Sum_probs=107.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      ++++++||||+|+||.+++++|+++|++|++++|++.+...     .....++.++.+|++|++++.++++       ++
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999987543111     1112468899999999998887764       58


Q ss_pred             CEEEEccccCCC----------CccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       123 d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      |+||||+|....          +...+++|+.+++++++++..    .+.++||++||.....+.+....|+.+|.+.|.
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~~~~  165 (250)
T PRK12939         86 DGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIG  165 (250)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHHHHH
Confidence            999999986431          234467899999988888754    345599999995433444556789999999999


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       166 ~~~~l  170 (250)
T PRK12939        166 MTRSL  170 (250)
T ss_pred             HHHHH
Confidence            88754

>PRK09242 tropinone reductase; Provisional

Probab=99.76  E-value=1.2e-17  Score=132.26  Aligned_cols=141  Identities=17%  Similarity=0.117  Sum_probs=108.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------cc-CCCCeEEEEccCCCHHHHHHHhc-----
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DS-WANNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~-~~~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      ..++|+++||||+|+||.+++++|+++|++|++++|+.+....      .. ...++.++.+|++|++++.++++     
T Consensus         6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (257)
T PRK09242          6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH   85 (257)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999997543111      00 12467889999999988766554     


Q ss_pred             --CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHH
Q 029125          121 --GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKR  184 (198)
Q Consensus       121 --~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~  184 (198)
                        ++|+|||++|...          .+...+.+|+.++.++++++.    +.+.++||++||.....+......|+.+|.
T Consensus        86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~  165 (257)
T PRK09242         86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKA  165 (257)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHHHH
Confidence              5899999998532          224457899999998888874    345679999999543345566678999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.+.+++..
T Consensus       166 a~~~~~~~l  174 (257)
T PRK09242        166 ALLQMTRNL  174 (257)
T ss_pred             HHHHHHHHH
Confidence            999988754

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.76  E-value=1.8e-17  Score=129.79  Aligned_cols=139  Identities=19%  Similarity=0.154  Sum_probs=106.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .+++++||||+|+||+++++.|+++|++|+++.|+..+...      .....++.++.+|+.|.+++.++++       +
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45799999999999999999999999999888887543111      1123467889999999998887765       5


Q ss_pred             CCEEEEccccCCC----------CccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|+|||++|....          +...+.+|+.++.++++++..    .+.++|+++||.....+......|+.+|.+.+
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~a~~  163 (248)
T PRK05557         84 VDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVI  163 (248)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHHHHH
Confidence            8999999986431          123467899999888888754    35568999998533333455678999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       164 ~~~~~~  169 (248)
T PRK05557        164 GFTKSL  169 (248)
T ss_pred             HHHHHH
Confidence            877654

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.2e-17  Score=130.25  Aligned_cols=140  Identities=22%  Similarity=0.204  Sum_probs=107.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---ccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      .++++++||||+|+||++++++|+++|++|++++|++.+...   .....++.++.+|+.|.+++.++++       ++|
T Consensus         5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (239)
T PRK12828          5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLD   84 (239)
T ss_pred             CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcC
Confidence            356899999999999999999999999999999997644211   1112357888999999988877765       589


Q ss_pred             EEEEccccCCC----------CccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       124 ~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      +|||++|....          +...+.+|..++.++++++.    +.+.++|+++||.....+.++...|+.+|.+.+.+
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~a~~~~  164 (239)
T PRK12828         85 ALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARL  164 (239)
T ss_pred             EEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHHHHHHH
Confidence            99999985321          12346788999988888774    45678999999954333445667899999998888


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      ++..
T Consensus       165 ~~~~  168 (239)
T PRK12828        165 TEAL  168 (239)
T ss_pred             HHHH
Confidence            7654

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.2e-17  Score=133.28  Aligned_cols=137  Identities=12%  Similarity=0.119  Sum_probs=104.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      |+|+||||+|+||.+++++|+++|++|++++|+..+...     .....++.++.+|++|++++.++++       ++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            479999999999999999999999999999987543111     1123467889999999988877664       6899


Q ss_pred             EEEccccCCC----------CccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          125 VISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       125 vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      ||||+|....          ++..+++|+.++..+.+.+    .+.+.++||++||.....+.+....|+.+|++.+.+.
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~  160 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALS  160 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHHH
Confidence            9999996431          1234678888888766664    5566789999999544445566789999999977665


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       161 ~~l  163 (270)
T PRK05650        161 ETL  163 (270)
T ss_pred             HHH
Confidence            543

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.1e-17  Score=132.35  Aligned_cols=139  Identities=13%  Similarity=0.051  Sum_probs=101.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi  126 (198)
                      .++++|+||||+|+||.+++++|+++|++|++++|+..........-+..++.+|++|++++.++++       ++|+||
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   84 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAF   84 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4578999999999999999999999999999999975432111001123678999999998887775       579999


Q ss_pred             EccccCCC------------CccceehhhHHHHHHHHHHH----HcCCCEEEEeeccc-cCCCCCCcchHHHHHHHHHHH
Q 029125          127 SCVGGFGS------------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAAD-FGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       127 ~~ag~~~~------------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~-~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      |++|....            +...+++|+.++..+++.+.    +.+.+++|++||.. .-....+...|+.+|++.+.+
T Consensus        85 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sKaal~~~  164 (255)
T PRK06057         85 NNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAM  164 (255)
T ss_pred             ECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHHHHHHHH
Confidence            99986421            23456789999887777653    34566899999842 211223456799999888776


Q ss_pred             HHh
Q 029125          190 LLT  192 (198)
Q Consensus       190 l~~  192 (198)
                      ++.
T Consensus       165 ~~~  167 (255)
T PRK06057        165 SRE  167 (255)
T ss_pred             HHH
Confidence            664

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.4e-17  Score=137.09  Aligned_cols=139  Identities=13%  Similarity=0.065  Sum_probs=105.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++++|+||||+|+||.+++++|+++|++|++++|+......     .....++.++.+|++|.+++.++++       +
T Consensus         6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~   85 (334)
T PRK07109          6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP   85 (334)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence            456899999999999999999999999999999997543111     1123467889999999998887754       5


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|++|||+|...          .+...+++|+.+..++.+++    .+.+.++||++||.....+.+....|+.+|++.+
T Consensus        86 iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a~~  165 (334)
T PRK07109         86 IDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIR  165 (334)
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHHHH
Confidence            899999998532          12345788888877655554    4555679999999543344555678999999988


Q ss_pred             HHHHh
Q 029125          188 TELLT  192 (198)
Q Consensus       188 ~~l~~  192 (198)
                      .+.+.
T Consensus       166 ~~~~~  170 (334)
T PRK07109        166 GFTDS  170 (334)
T ss_pred             HHHHH
Confidence            77654

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.6e-17  Score=129.08  Aligned_cols=138  Identities=17%  Similarity=0.147  Sum_probs=104.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-----CCCEEEEccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-----GVTAVISCVG  130 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~d~vi~~ag  130 (198)
                      |++++||||+|++|++++++|+++|++|++++|++.+........++.++.+|++|.++++++++     ++|+||||+|
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            47899999999999999999999999999999986543211112467888999999988887765     5899999998


Q ss_pred             cCCC------------CccceehhhHHHHHHHHHHHHc---CCCEEEEeeccccCC---CCCCcchHHHHHHHHHHHHHh
Q 029125          131 GFGS------------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGV---ANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       131 ~~~~------------~~~~~~~n~~~~~~~~~a~~~~---~~~~~v~~Ss~~~~~---~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      ....            +...+.+|+.++..+++++...   +..+++++||.....   +......|+.+|++.+.+++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~~~~~  160 (225)
T PRK08177         81 ISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRS  160 (225)
T ss_pred             ccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCccchHHHHHHHHHHHHH
Confidence            6421            2345788999999888887542   335788888742211   223455799999999998876


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       161 l  161 (225)
T PRK08177        161 F  161 (225)
T ss_pred             H
Confidence            5

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.8e-17  Score=131.44  Aligned_cols=138  Identities=11%  Similarity=0.105  Sum_probs=106.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      +++|+||||+|+||.+++++|+++|++|++++|+..+...     .....++.++.+|++|.+++..+++       ++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999999999997543110     1123468889999999998887765       689


Q ss_pred             EEEEccccCCC-----------CccceehhhHHHHHHHHHHHH---cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          124 AVISCVGGFGS-----------NSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       124 ~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~~---~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      +||||+|....           +...+++|+.+++++++.+..   .+.++||++||.....+..+...|+.+|.+.|.+
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~  160 (263)
T PRK06181         81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGF  160 (263)
T ss_pred             EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCccHHHHHHHHHHHH
Confidence            99999985431           123478999999999998853   2356899999854334455667899999999988


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      ++..
T Consensus       161 ~~~l  164 (263)
T PRK06181        161 FDSL  164 (263)
T ss_pred             HHHH
Confidence            7653

>PRK09186 flagellin modification protein A; Provisional

Probab=99.76  E-value=1.6e-17  Score=131.20  Aligned_cols=138  Identities=13%  Similarity=0.116  Sum_probs=100.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------cc-CCCCeEEEEccCCCHHHHHHHhcC------
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DS-WANNVIWHQGNLLSSDSWKEALDG------  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~-~~~~~~~~~~D~~d~~~~~~~~~~------  121 (198)
                      ++|+|+||||+|+||+++++.|+++|++|++++|+.+....      .. ....+.++.+|++|++++.+++++      
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            56899999999999999999999999999999987544211      00 123466779999999998887763      


Q ss_pred             -CCEEEEccccCCC-------------CccceehhhHHHHHHHHHH----HHcCCCEEEEeecc-ccCCC---------C
Q 029125          122 -VTAVISCVGGFGS-------------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAA-DFGVA---------N  173 (198)
Q Consensus       122 -~d~vi~~ag~~~~-------------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~-~~~~~---------~  173 (198)
                       +|+|||||+....             +...+++|+.+.+.+++++    ++.+.++||++||. .+..+         .
T Consensus        83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~  162 (256)
T PRK09186         83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSM  162 (256)
T ss_pred             CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhcccccc
Confidence             8999999974321             2334677887777665554    44567799999993 22111         1


Q ss_pred             CCcchHHHHHHHHHHHHHh
Q 029125          174 YLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       174 ~~~~~Y~~sK~~~e~~l~~  192 (198)
                      .....|+.+|.+.+.+.+.
T Consensus       163 ~~~~~Y~~sK~a~~~l~~~  181 (256)
T PRK09186        163 TSPVEYAAIKAGIIHLTKY  181 (256)
T ss_pred             CCcchhHHHHHHHHHHHHH
Confidence            1224699999999988763

>PRK07985 oxidoreductase; Provisional

Probab=99.76  E-value=2.1e-17  Score=133.62  Aligned_cols=140  Identities=16%  Similarity=0.051  Sum_probs=106.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc-c------ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-R------DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~-~------~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      .++++++||||+|+||.+++++|+++|++|++++|+..... +      .....++.++.+|++|.+++.++++      
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  126 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL  126 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999999877543211 0      1113357789999999988776654      


Q ss_pred             -CCCEEEEccccCC-----------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 -GVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 -~~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                       ++|++|||+|...           .+...+++|+.++..+++++...  ..++||++||...-.+.+....|+.+|++.
T Consensus       127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~~~Y~asKaal  206 (294)
T PRK07985        127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAI  206 (294)
T ss_pred             CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCcchhHHHHHHH
Confidence             5799999998531           23456899999999999988653  235899999954333445567899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       207 ~~l~~~l  213 (294)
T PRK07985        207 LNYSRGL  213 (294)
T ss_pred             HHHHHHH
Confidence            9887654

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.76  E-value=2e-17  Score=130.78  Aligned_cols=140  Identities=16%  Similarity=0.097  Sum_probs=108.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++++++||||+|+||++++++|+++|++|++++|+.+....     .....++.++.+|++|++++..+++       .
T Consensus         9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   88 (256)
T PRK06124          9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR   88 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            568899999999999999999999999999999997543111     1123468899999999988877665       4


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|+||||+|...          .++..+++|+.+++++++++.+    .+.++||++||.....+.+....|+.+|.+.+
T Consensus        89 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~  168 (256)
T PRK06124         89 LDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLT  168 (256)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHHHHHH
Confidence            699999999642          1234578999999988876643    56779999999543334455678999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       169 ~~~~~l  174 (256)
T PRK06124        169 GLMRAL  174 (256)
T ss_pred             HHHHHH
Confidence            887754

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.76  E-value=1.5e-17  Score=130.23  Aligned_cols=139  Identities=19%  Similarity=0.135  Sum_probs=104.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v  125 (198)
                      ++++++||||+|+||+++++.|+++|+.|++.+|+..+...  .....++.++.+|++|.+++.++++       ++|+|
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL   84 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46899999999999999999999999999888876543211  1123467889999999988877653       58999


Q ss_pred             EEccccCC----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 029125          126 ISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       126 i~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      |||+|...          .++..+++|+.+..++++++.+    .+.++||++||.....+.+....|+.+|.+.+.+++
T Consensus        85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~~~~~  164 (245)
T PRK12936         85 VNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSK  164 (245)
T ss_pred             EECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHHHHHHHH
Confidence            99998642          1244578999999888887642    456799999994322233455689999998887766


Q ss_pred             hh
Q 029125          192 TR  193 (198)
Q Consensus       192 ~~  193 (198)
                      ..
T Consensus       165 ~l  166 (245)
T PRK12936        165 SL  166 (245)
T ss_pred             HH
Confidence            43

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2.8e-17  Score=128.07  Aligned_cols=131  Identities=20%  Similarity=0.136  Sum_probs=102.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc------CCCEEEEcc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD------GVTAVISCV  129 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d~vi~~a  129 (198)
                      +++|+||||+|+||.+++++|+++|++|++++|+....      ....++.+|++|.+++.++++      ++|+||||+
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a   76 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNV   76 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence            57899999999999999999999999999999976541      122578999999998887765      589999999


Q ss_pred             ccCCC----------CccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          130 GGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       130 g~~~~----------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      |....          +...+++|+.+..++.+++    ++.+.++||++||.. ..+.+...+|+.+|.+.|.+++..
T Consensus        77 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~~~~~~~  153 (234)
T PRK07577         77 GIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALVGCTRTW  153 (234)
T ss_pred             CCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHHHHHHHHHHHHH
Confidence            96432          2345778889888776665    445677999999943 123345678999999999887754

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.75  E-value=7.4e-18  Score=124.81  Aligned_cols=137  Identities=18%  Similarity=0.200  Sum_probs=110.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCC--CCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG-LTVASLSRSG--RSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~--~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      |+++||||+++||.+++++|+++| .+|+++.|++  +....     .....++.++.+|++++++++++++       .
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            579999999999999999999995 5778888871  11000     1123678999999999988887765       5


Q ss_pred             CCEEEEccccCCC----------CccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 029125          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      +|++|||+|....          +...+++|+.+...+.+++...+.++||++||.....+.+....|+.+|++.+.+++
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~askaal~~~~~  160 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSPGMSAYSASKAALRGLTQ  160 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSSTTBHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCCCChhHHHHHHHHHHHHH
Confidence            7999999996541          235678999999999999987667799999997666677788899999999999887


Q ss_pred             hh
Q 029125          192 TR  193 (198)
Q Consensus       192 ~~  193 (198)
                      ..
T Consensus       161 ~l  162 (167)
T PF00106_consen  161 SL  162 (167)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.5e-17  Score=136.54  Aligned_cols=139  Identities=13%  Similarity=0.098  Sum_probs=105.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ..+++|+||||+|+||++++++|+++|++|++++|+.+....     ......+.++.+|++|.+++.++++       +
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR   84 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            356899999999999999999999999999999997643211     1123467788999999998887763       5


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|++|||||...          .+...+++|+.++.++.+++    .+.+..+||++||...-.+.+....|+.+|++.+
T Consensus        85 iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaal~  164 (330)
T PRK06139         85 IDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLR  164 (330)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHHHH
Confidence            899999998532          12345789999998877776    3445678999998543334455678999999877


Q ss_pred             HHHHh
Q 029125          188 TELLT  192 (198)
Q Consensus       188 ~~l~~  192 (198)
                      .+.+.
T Consensus       165 ~~~~s  169 (330)
T PRK06139        165 GFSEA  169 (330)
T ss_pred             HHHHH
Confidence            65554

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.75  E-value=1.7e-17  Score=131.14  Aligned_cols=140  Identities=11%  Similarity=0.077  Sum_probs=106.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---ccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      .++++++||||+|+||.+++++|+++|++|+++++.......   ......+.++.+|++|.+++.++++       ++|
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID   87 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            457899999999999999999999999999988875432111   1113457889999999988887775       589


Q ss_pred             EEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cC-CCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          124 AVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      ++|||||...          .+...+++|+.++.++++++..    .+ .++||++||.....+......|+.+|++.+.
T Consensus        88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  167 (253)
T PRK08993         88 ILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMG  167 (253)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHHHH
Confidence            9999999642          2345688999999988888743    22 3589999994333344455789999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +.+..
T Consensus       168 ~~~~l  172 (253)
T PRK08993        168 VTRLM  172 (253)
T ss_pred             HHHHH
Confidence            87754

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.75  E-value=1.9e-17  Score=129.76  Aligned_cols=138  Identities=20%  Similarity=0.185  Sum_probs=105.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      +++++||||+|+||+++++.|+++|++|++++|+......      .....++.++.+|+.|.+++.++++       ++
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999987532111      0112458899999999998877664       48


Q ss_pred             CEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      |+|||++|...          .++..+++|+.+..++.+++    ++.+.++||++||.....+.+....|+.+|.+.+.
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  161 (245)
T PRK12824         82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG  161 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence            99999998542          12345789999998875554    55567799999995433445566789999999888


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       162 ~~~~l  166 (245)
T PRK12824        162 FTKAL  166 (245)
T ss_pred             HHHHH
Confidence            77654

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.3e-17  Score=131.51  Aligned_cols=140  Identities=12%  Similarity=0.030  Sum_probs=107.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++++++||||+|+||.+++++|+++|++|++++|+.++...     .....++.++.+|++|.+++.++++       +
T Consensus         5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   84 (253)
T PRK06172          5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR   84 (253)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            356899999999999999999999999999999998643111     1123468899999999988887665       4


Q ss_pred             CCEEEEccccCC-----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          122 VTAVISCVGGFG-----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       122 ~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      +|+||||+|...           .+...+++|+.+...+++++    .+.+.++|+++||...-.+.+....|+.+|++.
T Consensus        85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~  164 (253)
T PRK06172         85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAV  164 (253)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHH
Confidence            699999998532           12345779999988776654    344557899999954334456678899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       165 ~~~~~~l  171 (253)
T PRK06172        165 IGLTKSA  171 (253)
T ss_pred             HHHHHHH
Confidence            9888765

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.4e-17  Score=130.01  Aligned_cols=139  Identities=19%  Similarity=0.125  Sum_probs=106.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccC--CCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSW--ANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~--~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      .+++|+||||+|+||.+++++|+++|++|++++|++.+...  ...  ..++.++.+|+.|.+++.++++       ++|
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD   84 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            35799999999999999999999999999999997643211  100  1468899999999998887765       689


Q ss_pred             EEEEccccCCC----------CccceehhhHHHHHHHHHHHH---cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       124 ~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~---~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      +|||++|....          +...+++|+.+...+++++.+   .+.++||++||.....+......|..+|++.+.+.
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~~  164 (237)
T PRK07326         85 VLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFS  164 (237)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCCchHHHHHHHHHHHH
Confidence            99999986431          234578899999988888754   34568999998533334455678999999988877


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       165 ~~~  167 (237)
T PRK07326        165 EAA  167 (237)
T ss_pred             HHH
Confidence            764

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.2e-17  Score=133.63  Aligned_cols=140  Identities=14%  Similarity=0.130  Sum_probs=106.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccC--CCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSW--ANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~--~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      .++++++||||+|+||.++++.|+++|++|++++|+..+...  ...  ...+..+.+|++|.+++.++++       ++
T Consensus         7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (296)
T PRK05872          7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI   86 (296)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            457899999999999999999999999999999997543111  111  2345667799999988877654       58


Q ss_pred             CEEEEccccCC----------CCccceehhhHHHHHHHHHHHHc---CCCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~---~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      |+||||+|...          .++..+++|+.++.++++++...   ..++||++||.....+.+....|+.+|++.+.+
T Consensus        87 d~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~  166 (296)
T PRK05872         87 DVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAF  166 (296)
T ss_pred             CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCchHHHHHHHHHHHH
Confidence            99999999642          12456789999999988887532   346899999954334445667899999999988


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      ++..
T Consensus       167 ~~~l  170 (296)
T PRK05872        167 ANAL  170 (296)
T ss_pred             HHHH
Confidence            7653

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.75  E-value=2e-17  Score=134.49  Aligned_cols=141  Identities=14%  Similarity=0.051  Sum_probs=107.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      ..++++++||||+|+||.+++++|+++|++|++.+++.....+      .....++.++.+|++|.+++.++++      
T Consensus         9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g   88 (306)
T PRK07792          9 DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLG   88 (306)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhC
Confidence            3567899999999999999999999999999999875432111      1113467889999999988877664      


Q ss_pred             CCCEEEEccccCCC----------CccceehhhHHHHHHHHHHHHc-----------CCCEEEEeeccccCCCCCCcchH
Q 029125          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK-----------GVKRFVYISAADFGVANYLLQGY  179 (198)
Q Consensus       121 ~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~~-----------~~~~~v~~Ss~~~~~~~~~~~~Y  179 (198)
                      ++|+||||||....          +...+++|+.+++++++++...           ..++||++||...-.+......|
T Consensus        89 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  168 (306)
T PRK07792         89 GLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANY  168 (306)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCchH
Confidence            58999999996432          3446789999999988876421           12589999985433344556789


Q ss_pred             HHHHHHHHHHHHhh
Q 029125          180 YEGKRAAETELLTR  193 (198)
Q Consensus       180 ~~sK~~~e~~l~~~  193 (198)
                      +.+|++.+.+++..
T Consensus       169 ~asKaal~~l~~~l  182 (306)
T PRK07792        169 GAAKAGITALTLSA  182 (306)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999887754

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.7e-17  Score=131.02  Aligned_cols=137  Identities=14%  Similarity=0.132  Sum_probs=105.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      +|+++||||+|+||.++++.|+++|++|++++|+......     .....++.++.+|++|++++.++++       ++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            4789999999999999999999999999999997543111     1113468899999999988877664       579


Q ss_pred             EEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cC-CCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          124 AVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      +||||+|...          .|+..+++|+.+++++++++.+    .+ .++|+++||.....+......|+.+|.+.+.
T Consensus        81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~  160 (252)
T PRK07677         81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLA  160 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHH
Confidence            9999998422          1345689999999999998843    22 3589999985433344556789999999998


Q ss_pred             HHHh
Q 029125          189 ELLT  192 (198)
Q Consensus       189 ~l~~  192 (198)
                      +.+.
T Consensus       161 ~~~~  164 (252)
T PRK07677        161 MTRT  164 (252)
T ss_pred             HHHH
Confidence            8775

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.75  E-value=9.1e-18  Score=130.60  Aligned_cols=133  Identities=11%  Similarity=0.017  Sum_probs=102.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc----CCCEEEEccccC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD----GVTAVISCVGGF  132 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~d~vi~~ag~~  132 (198)
                      |+++||||+|+||+++++.|+++|++|++++|+.++........++.++.+|++|++++.++++    ++|++|||+|..
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~   80 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPS   80 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCcc
Confidence            3699999999999999999999999999999975432111111246788999999999888775    589999998731


Q ss_pred             ---------------CCCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          133 ---------------GSNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       133 ---------------~~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                                     ..|...+++|+.++..+++++...  ..++||++||..    .+....|+.+|++.+.+++..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~----~~~~~~Y~asKaal~~~~~~l  154 (223)
T PRK05884         81 WDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN----PPAGSAEAAIKAALSNWTAGQ  154 (223)
T ss_pred             ccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC----CCCccccHHHHHHHHHHHHHH
Confidence                           012445789999999999888542  236899999853    234578999999999888754

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.9e-17  Score=131.23  Aligned_cols=140  Identities=16%  Similarity=0.128  Sum_probs=105.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccC-CCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSW-ANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~-~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      .++++++||||+|+||.+++++|+++|++|++++|+......  ... ..++.++.+|++|++.+.++++       ++|
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   88 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD   88 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            456899999999999999999999999999999997543211  000 1156889999999998877664       689


Q ss_pred             EEEEccccCCC-----------CccceehhhHHHHHHHHHHH----HcCC-CEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          124 AVISCVGGFGS-----------NSYMYKINGTANINAIRAAS----EKGV-KRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       124 ~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~----~~~~-~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|||++|....           +...+++|+.++.++++++.    ..+. ++|+++||.....+.+....|+.+|.+.|
T Consensus        89 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~a~~  168 (264)
T PRK12829         89 VLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVV  168 (264)
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHHHHH
Confidence            99999996521           24557899999998888773    3344 57888887433333455568999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       169 ~~~~~l  174 (264)
T PRK12829        169 GLVKSL  174 (264)
T ss_pred             HHHHHH
Confidence            887764

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.5e-17  Score=128.84  Aligned_cols=136  Identities=15%  Similarity=0.051  Sum_probs=101.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHHHHHHHhc---CCCEEEEcccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALD---GVTAVISCVGG  131 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~vi~~ag~  131 (198)
                      +|+++||||+|+||++++++|+++ ++|++++|+..+... .....+++++.+|++|.+++.++++   ++|+|||++|.
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~   81 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV   81 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence            579999999999999999999999 999999997543111 1112367899999999999998887   58999999986


Q ss_pred             CCC----------CccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          132 FGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       132 ~~~----------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ...          +...+.+|+.+..++.+.+    ++. .++++++||.....+.++...|+.+|.+.+.+++..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~~  156 (227)
T PRK08219         82 ADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKFALRALADAL  156 (227)
T ss_pred             CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHHHHHHHHHHH
Confidence            431          1234677888865544444    333 468999998543344556678999999999877653

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.5e-17  Score=132.41  Aligned_cols=140  Identities=16%  Similarity=0.089  Sum_probs=106.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++++++||||+|+||.+++++|+++|++|++++|+.+....     .....++.++.+|++|++++.++++       +
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~   86 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP   86 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999999987543111     1112456789999999988887764       4


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHHHHc---CCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~---~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      +|+||||+|...          .+...+++|+.++.++++++...   ..++|+++||.....+.+....|+.+|.+.+.
T Consensus        87 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~~~~Y~asK~a~~~  166 (264)
T PRK07576         87 IDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCAAKAGVDM  166 (264)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCCccHHHHHHHHHHH
Confidence            799999998432          12345679999999988887542   23589999995433445566789999999999


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       167 l~~~l  171 (264)
T PRK07576        167 LTRTL  171 (264)
T ss_pred             HHHHH
Confidence            88754

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.6e-17  Score=130.90  Aligned_cols=138  Identities=17%  Similarity=0.212  Sum_probs=103.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---ccCCCCeEEEEccCCCHHHHHHHhcCC---------C
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALDGV---------T  123 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~---------d  123 (198)
                      ||+++||||+|+||++++++|+++|++|++++|++.+...   .....++.++.+|++|.+++..+++++         +
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   80 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVS   80 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence            4789999999999999999999999999999997632111   112356889999999999988777531         2


Q ss_pred             --EEEEccccCCC-----------CccceehhhHHHHHHHHHHH----Hc-CCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          124 --AVISCVGGFGS-----------NSYMYKINGTANINAIRAAS----EK-GVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       124 --~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~----~~-~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                        .+|||+|....           +...+++|+.+...+++.+.    +. +.++||++||.....+.++...|+.+|++
T Consensus        81 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  160 (251)
T PRK06924         81 SIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAG  160 (251)
T ss_pred             ceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHHHH
Confidence              78999985321           23457789888776666653    32 34689999995444556667899999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+++..
T Consensus       161 ~~~~~~~l  168 (251)
T PRK06924        161 LDMFTQTV  168 (251)
T ss_pred             HHHHHHHH
Confidence            99988754

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.75  E-value=3.9e-17  Score=127.46  Aligned_cols=136  Identities=16%  Similarity=0.120  Sum_probs=104.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCH-HHHHHHhcCCCEEEEccccC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSS-DSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~d~vi~~ag~~  132 (198)
                      .++++++||||+|+||.++++.|+++|++|++++|+.....    ..++.++.+|++|+ +.+.+.+.++|+||||+|..
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~   78 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL----SGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGIL   78 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc----CCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCC
Confidence            35689999999999999999999999999999998754321    34688999999987 54555556799999999853


Q ss_pred             C-----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          133 G-----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       133 ~-----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      .           .+...+++|+.++.++++++..    .+.++||++||.....+......|+.+|.+.+.+++..
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l  154 (235)
T PRK06550         79 DDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQL  154 (235)
T ss_pred             CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHHHHHHHH
Confidence            2           1234578999999988888743    34568999999433233445678999999988877653

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.75  E-value=2e-17  Score=129.96  Aligned_cols=139  Identities=20%  Similarity=0.236  Sum_probs=103.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ++|+++||||+|+||++++++|+++|++|+++.++......      ......+..+.+|+.|.+++.++++       +
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            35789999999999999999999999999886543221110      0112357788999999988877654       5


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|+||||+|...          .++..+++|+.++..+.+++    .+.+.++||++||.....+......|+.+|.+.+
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a~~  161 (246)
T PRK12938         82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIH  161 (246)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHHHH
Confidence            899999999643          12455789999987766655    4456679999999544445566778999999988


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       162 ~~~~~l  167 (246)
T PRK12938        162 GFTMSL  167 (246)
T ss_pred             HHHHHH
Confidence            876653

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.3e-17  Score=131.80  Aligned_cols=140  Identities=14%  Similarity=0.122  Sum_probs=105.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++++++||||+|+||.+++++|+++|++|++++|+..+...     .....++..+.+|++|++++.++++       +
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG   86 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            457899999999999999999999999999999987543111     1112467889999999998877664       6


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cC-CCEEEEeeccccCC-C-CCCcchHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGV-A-NYLLQGYYEGKR  184 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~-~~~~v~~Ss~~~~~-~-~~~~~~Y~~sK~  184 (198)
                      +|++|||+|...          .++..+++|+.+++.+++++..    .+ .++|+++||..... . +.....|+.+|+
T Consensus        87 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asKa  166 (253)
T PRK05867         87 IDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKA  166 (253)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHHH
Confidence            899999998642          1244568999999988888743    22 24799998843221 1 223468999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.+.+++..
T Consensus       167 al~~~~~~l  175 (253)
T PRK05867        167 AVIHLTKAM  175 (253)
T ss_pred             HHHHHHHHH
Confidence            999988765

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.75  E-value=6.9e-17  Score=130.41  Aligned_cols=141  Identities=13%  Similarity=0.070  Sum_probs=107.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      ..++++++||||+|+||.+++++|+++|++|++++|+......      .....++.++.+|++|.+.+.++++      
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~  122 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL  122 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3456899999999999999999999999999999987533111      1112357889999999998887764      


Q ss_pred             -CCCEEEEccccCCC-----------CccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 -GVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 -~~d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                       ++|+||||+|....           +...+++|+.+.+++++++...  ..++||++||.....+......|+.+|++.
T Consensus       123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK~a~  202 (290)
T PRK06701        123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKGAI  202 (290)
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCcchhHHHHHHH
Confidence             57999999985321           1345789999999999998653  235899999944333344557899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       203 ~~l~~~l  209 (290)
T PRK06701        203 HAFTRSL  209 (290)
T ss_pred             HHHHHHH
Confidence            9887765

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=2.1e-17  Score=130.02  Aligned_cols=141  Identities=16%  Similarity=0.117  Sum_probs=104.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc------cccCCCCeEEEEccCC--CHHHHHHHh-----
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL------RDSWANNVIWHQGNLL--SSDSWKEAL-----  119 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~------~~~~~~~~~~~~~D~~--d~~~~~~~~-----  119 (198)
                      ..++++|+||||+|+||.+++++|+++|++|++++|+..+..      ......++.++.+|++  +.+++.+++     
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999754311      1111235677888886  555544433     


Q ss_pred             --cCCCEEEEccccCC-----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHH
Q 029125          120 --DGVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEG  182 (198)
Q Consensus       120 --~~~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~s  182 (198)
                        ..+|+|||+||...           .+...+++|+.+++++++++.    +.+.++|+++||.....+......|+.+
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  168 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVS  168 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHHH
Confidence              36899999998532           123457899999888888763    4567899999995433344566789999


Q ss_pred             HHHHHHHHHhh
Q 029125          183 KRAAETELLTR  193 (198)
Q Consensus       183 K~~~e~~l~~~  193 (198)
                      |++.+.+++..
T Consensus       169 K~a~~~~~~~~  179 (247)
T PRK08945        169 KFATEGMMQVL  179 (247)
T ss_pred             HHHHHHHHHHH
Confidence            99999987754

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=4e-17  Score=129.16  Aligned_cols=140  Identities=14%  Similarity=0.073  Sum_probs=106.2

Q ss_pred             CCCCeEEEEcCC--chhHHHHHHHHHHCCCeEEEeecCCCCc--ccccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           54 PPSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSS--LRDSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        54 ~~~~~vlvtGat--G~iG~~l~~~l~~~g~~V~~l~r~~~~~--~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      .++|+++||||+  ++||++++++|+++|++|++.+|+....  ........+.++.+|++|+++++++++       ++
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            457899999999  7999999999999999999998863211  111112457889999999988877654       48


Q ss_pred             CEEEEccccCC--------------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          123 TAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       123 d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      |++|||||...              .|+..+++|+.+.+.+.+++...  ..++||++||.....+.+....|+.+|++.
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~asKaal  164 (252)
T PRK06079         85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNVMGIAKAAL  164 (252)
T ss_pred             CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCcchhhHHHHHHH
Confidence            99999998532              12345789999999888887543  235899999854334445567899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+.+..
T Consensus       165 ~~l~~~l  171 (252)
T PRK06079        165 ESSVRYL  171 (252)
T ss_pred             HHHHHHH
Confidence            9988754

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.75  E-value=1.8e-17  Score=130.41  Aligned_cols=139  Identities=12%  Similarity=-0.008  Sum_probs=105.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc------cCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD------SWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~------~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ++++|+||||+|+||++++++|+++|++|++..|+.......      ....++.++.+|+++++++..+++       +
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV   84 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999998877653221110      112356788999999988777654       5


Q ss_pred             CCEEEEccccCCC----------CccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      +|+||||+|....          ++..+++|+.+..++++++.+.  ..++||++||...-.+.++...|+.+|++.|.+
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~  164 (252)
T PRK06077         85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGAMKAAVINL  164 (252)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCchHHHHHHHHHHHH
Confidence            8999999995321          1345789999999888888653  235899999954334556678999999999988


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      ++..
T Consensus       165 ~~~l  168 (252)
T PRK06077        165 TKYL  168 (252)
T ss_pred             HHHH
Confidence            8765

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.74  E-value=1.9e-17  Score=131.42  Aligned_cols=140  Identities=20%  Similarity=0.152  Sum_probs=102.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-------ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-------~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      .++|+++||||+++||++++++|+++|++|+++.|+......       .....++.++.+|++|++++.++++      
T Consensus         6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (260)
T PRK08416          6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF   85 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            357899999999999999999999999999888764332111       1113467899999999988877665      


Q ss_pred             -CCCEEEEccccCC----------------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchH
Q 029125          121 -GVTAVISCVGGFG----------------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGY  179 (198)
Q Consensus       121 -~~d~vi~~ag~~~----------------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y  179 (198)
                       ++|++|||||...                .+...+++|+.+.+.+.+.+    .+.+.++||++||...-.+.+....|
T Consensus        86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  165 (260)
T PRK08416         86 DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGH  165 (260)
T ss_pred             CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCcccc
Confidence             4799999997531                11234667777777655554    33345699999995433344556789


Q ss_pred             HHHHHHHHHHHHhh
Q 029125          180 YEGKRAAETELLTR  193 (198)
Q Consensus       180 ~~sK~~~e~~l~~~  193 (198)
                      +.+|++.+.+++..
T Consensus       166 ~asK~a~~~~~~~l  179 (260)
T PRK08416        166 GTSKAAVETMVKYA  179 (260)
T ss_pred             hhhHHHHHHHHHHH
Confidence            99999999988765

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.74  E-value=2.8e-17  Score=130.59  Aligned_cols=139  Identities=13%  Similarity=0.097  Sum_probs=105.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccC-CCCeEEEEccCCCHHHHHHHhc------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSW-ANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~-~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      .++++++||||+|+||.+++++|+++|++|++++|+..+...      ... ..++.++.+|++|.+++.++++      
T Consensus         6 l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T PRK07062          6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF   85 (265)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            457899999999999999999999999999999997643111      111 1357789999999988876654      


Q ss_pred             -CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                       ++|++|||||...          .|...+++|+.+.+.+++.+    ++.+.++||++||...-.+.+....|+.+|++
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~asKaa  165 (265)
T PRK07062         86 GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAG  165 (265)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHHHHH
Confidence             5799999999532          23445678888887666665    33456799999995433444556789999999


Q ss_pred             HHHHHHh
Q 029125          186 AETELLT  192 (198)
Q Consensus       186 ~e~~l~~  192 (198)
                      .+.+.+.
T Consensus       166 l~~~~~~  172 (265)
T PRK07062        166 LLNLVKS  172 (265)
T ss_pred             HHHHHHH
Confidence            8887764

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3.6e-17  Score=129.51  Aligned_cols=139  Identities=17%  Similarity=0.230  Sum_probs=103.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---------ccCCCCeEEEEccCCCHHHHHHHhc-----
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---------~~~~~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      ++++++||||+|+||.++++.|+++|++|+++.++......         .....++.++.+|++|++++.++++     
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA   86 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence            46899999999999999999999999998887765322110         0112467889999999999887765     


Q ss_pred             --CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 --GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 --~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                        ++|++|||+|...          .+...+++|+.++..+++++...  ..+++++++|...+.+.+....|+.+|++.
T Consensus        87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~~~~~Y~~sK~a~  166 (257)
T PRK12744         87 FGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTPFYSAYAGSKAPV  166 (257)
T ss_pred             hCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCCCcccchhhHHHH
Confidence              5899999999532          12446789999999999988653  134677664432233445567899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      |.+++..
T Consensus       167 ~~~~~~l  173 (257)
T PRK12744        167 EHFTRAA  173 (257)
T ss_pred             HHHHHHH
Confidence            9988866

>PRK05865 hypothetical protein; Provisional

Probab=99.74  E-value=3.1e-17  Score=147.38  Aligned_cols=116  Identities=22%  Similarity=0.379  Sum_probs=100.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCCCCc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS  136 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~  136 (198)
                      |+|+||||+||||++++++|+++|++|++++|+....    ...++.++.+|+.|.+++.++++++|+|||+|+....  
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~----~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~--   74 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS----WPSSADFIAADIRDATAVESAMTGADVVAHCAWVRGR--   74 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh----cccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccc--
Confidence            4799999999999999999999999999999874321    1246789999999999999999999999999986432  


Q ss_pred             cceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          137 YMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       137 ~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                       .+++|+.++.+++++|++.++++|||+||..              |.++|++++++
T Consensus        75 -~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~--------------K~aaE~ll~~~  116 (854)
T PRK05865         75 -NDHINIDGTANVLKAMAETGTGRIVFTSSGH--------------QPRVEQMLADC  116 (854)
T ss_pred             -hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH--------------HHHHHHHHHHc
Confidence             5789999999999999999999999999852              88888888654

>PRK06484 short chain dehydrogenase; Validated

Probab=99.74  E-value=3.4e-17  Score=141.91  Aligned_cols=141  Identities=13%  Similarity=0.131  Sum_probs=110.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc--cccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      ...+|+++||||+|+||.+++++|+++|++|++++|+..+..  ......++..+.+|++|++++.++++       .+|
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  345 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD  345 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            346789999999999999999999999999999999754311  11123456788999999998887765       489


Q ss_pred             EEEEccccCC-----------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          124 AVISCVGGFG-----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       124 ~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      ++|||||...           .++..+++|+.+++++++++...  +.++||++||.....+.++...|+.+|++.+.++
T Consensus       346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~  425 (520)
T PRK06484        346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLS  425 (520)
T ss_pred             EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCchhHHHHHHHHHHH
Confidence            9999999642           12456789999999999888653  3468999999554455566789999999999888


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       426 ~~l  428 (520)
T PRK06484        426 RSL  428 (520)
T ss_pred             HHH
Confidence            764

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.74  E-value=3.6e-17  Score=145.74  Aligned_cols=120  Identities=19%  Similarity=0.262  Sum_probs=93.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~  131 (198)
                      ...|+||||||+||||++|++.|.++|++|..                   ..+|++|.+.+...++  ++|+|||+|+.
T Consensus       378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~-------------------~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~  438 (668)
T PLN02260        378 KPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY-------------------GKGRLEDRSSLLADIRNVKPTHVFNAAGV  438 (668)
T ss_pred             CCCceEEEECCCchHHHHHHHHHHhCCCeEEe-------------------eccccccHHHHHHHHHhhCCCEEEECCcc
Confidence            34578999999999999999999999988731                   1236788888888776  68999999986


Q ss_pred             CC---------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCC----------C------C-CCcchHHHHHH
Q 029125          132 FG---------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGV----------A------N-YLLQGYYEGKR  184 (198)
Q Consensus       132 ~~---------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~----------~------~-~~~~~Y~~sK~  184 (198)
                      ..         .+...+++|+.++.+++++|++.+++ ++++|| .+|+.          +      + ++.+.|+.+|+
T Consensus       439 ~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~  517 (668)
T PLN02260        439 TGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKA  517 (668)
T ss_pred             cCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHH
Confidence            52         12345789999999999999999986 555555 55431          1      1 12378999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      ++|.+++++
T Consensus       518 ~~E~~~~~~  526 (668)
T PLN02260        518 MVEELLREY  526 (668)
T ss_pred             HHHHHHHhh
Confidence            999999875

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.74  E-value=4.5e-17  Score=127.62  Aligned_cols=140  Identities=14%  Similarity=0.056  Sum_probs=105.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEe-ecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASL-SRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l-~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++++++||||+|+||.++++.|+++|++|+++ +|+..+...     .....++.++.+|++|++++.++++       
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG   82 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            356799999999999999999999999999998 886543111     1113458899999999998887765       


Q ss_pred             CCCEEEEccccCCC----------CccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 ~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      ++|+|||++|....          ++..+++|+.+..++++++..    .+.++||++||...-.+......|+.+|.+.
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~  162 (247)
T PRK05565         83 KIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAV  162 (247)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHHHH
Confidence            68999999986421          234578899998888877753    4567899999943223344566899999998


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       163 ~~~~~~~  169 (247)
T PRK05565        163 NAFTKAL  169 (247)
T ss_pred             HHHHHHH
Confidence            8776654

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3.8e-17  Score=129.61  Aligned_cols=139  Identities=17%  Similarity=0.073  Sum_probs=105.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc----ccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      ++++++||||+|+||++++++|+++|++|++++|+......    .....++.++.+|++|.+++.++++       .+|
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   84 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID   84 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46899999999999999999999999999999987532110    1112457889999999998887765       579


Q ss_pred             EEEEccccCCC----------CccceehhhHHHHHHHHHHHH----cCCCEEEEeecccc-CCCCCCcchHHHHHHHHHH
Q 029125          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADF-GVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       124 ~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~-~~~~~~~~~Y~~sK~~~e~  188 (198)
                      +||||+|....          ++..+++|+.++..+++++..    .+.++||++||... ..+.+....|+.+|.+.|.
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~  164 (263)
T PRK08226         85 ILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVG  164 (263)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHHHHHH
Confidence            99999995321          233578999999988888643    34568999998432 2334556789999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       165 ~~~~l  169 (263)
T PRK08226        165 LTKSL  169 (263)
T ss_pred             HHHHH
Confidence            87754

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.74  E-value=5.3e-17  Score=128.32  Aligned_cols=140  Identities=13%  Similarity=0.062  Sum_probs=107.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--c---cCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D---SWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~---~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ..+++|+||||+|+||++++++|+++|++|++++|+.++...  .   ....++.++.+|+++.+++.++++       +
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            457899999999999999999999999999999997543111  0   113467899999999998888765       5


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cC--------CCEEEEeeccccCCCCCCcchH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG--------VKRFVYISAADFGVANYLLQGY  179 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~--------~~~~v~~Ss~~~~~~~~~~~~Y  179 (198)
                      +|+||||+|...          .++..+++|+.+.+.+++++..    ..        .+++|++||.....+.+...+|
T Consensus        87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y  166 (258)
T PRK06949         87 IDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLY  166 (258)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccHH
Confidence            899999999532          2344578999999888877642    21        3589999985444455567789


Q ss_pred             HHHHHHHHHHHHhh
Q 029125          180 YEGKRAAETELLTR  193 (198)
Q Consensus       180 ~~sK~~~e~~l~~~  193 (198)
                      +.+|.+.+.+++..
T Consensus       167 ~~sK~a~~~~~~~l  180 (258)
T PRK06949        167 CMSKAAVVHMTRAM  180 (258)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999888764

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.74  E-value=3e-17  Score=129.56  Aligned_cols=140  Identities=16%  Similarity=0.104  Sum_probs=110.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc----cCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD----SWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .-.++.|+||||++++|+.++.+|+++|.++++.+.+.....+.    .....+....||++|.+++.+..+       +
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~  114 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGD  114 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            34678999999999999999999999999999999986542221    011368899999999988776543       5


Q ss_pred             CCEEEEccccCCCC----------ccceehhhHHHHHHHHH----HHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFGSN----------SYMYKINGTANINAIRA----ASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~~~----------~~~~~~n~~~~~~~~~a----~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|++|||||.....          +..+++|+.+++..+++    +.+.+.++||.++|...-.+.+....|.+||.++.
T Consensus       115 V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~v  194 (300)
T KOG1201|consen  115 VDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKFAAV  194 (300)
T ss_pred             ceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHHHHH
Confidence            89999999965321          35689999999865555    45667789999999766667788889999999988


Q ss_pred             HHHHh
Q 029125          188 TELLT  192 (198)
Q Consensus       188 ~~l~~  192 (198)
                      .+-++
T Consensus       195 Gfhes  199 (300)
T KOG1201|consen  195 GFHES  199 (300)
T ss_pred             HHHHH
Confidence            65443

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.74  E-value=6e-17  Score=128.15  Aligned_cols=139  Identities=14%  Similarity=0.062  Sum_probs=105.0

Q ss_pred             CCCeEEEEcCCc--hhHHHHHHHHHHCCCeEEEeecCCCCc----------c------cccCCCCeEEEEccCCCHHHHH
Q 029125           55 PSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRSS----------L------RDSWANNVIWHQGNLLSSDSWK  116 (198)
Q Consensus        55 ~~~~vlvtGatG--~iG~~l~~~l~~~g~~V~~l~r~~~~~----------~------~~~~~~~~~~~~~D~~d~~~~~  116 (198)
                      ++++|+||||+|  +||.+++++|+++|++|++++|++.+.          .      ......++.++.+|++|.+++.
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   83 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPN   83 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            567899999995  799999999999999999999873210          0      0011346889999999998877


Q ss_pred             HHhc-------CCCEEEEccccCCC----------CccceehhhHHHHHHHHHHHHc----CCCEEEEeeccccCCCCCC
Q 029125          117 EALD-------GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK----GVKRFVYISAADFGVANYL  175 (198)
Q Consensus       117 ~~~~-------~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~~----~~~~~v~~Ss~~~~~~~~~  175 (198)
                      .+++       .+|+|||++|....          ++..+++|+.++..+++++...    +.++||++||.....+...
T Consensus        84 ~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~  163 (256)
T PRK12748         84 RVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPD  163 (256)
T ss_pred             HHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCCC
Confidence            6654       47999999986421          2334789999999999887542    4468999999533334445


Q ss_pred             cchHHHHHHHHHHHHHhh
Q 029125          176 LQGYYEGKRAAETELLTR  193 (198)
Q Consensus       176 ~~~Y~~sK~~~e~~l~~~  193 (198)
                      ...|+.+|++.+.+++..
T Consensus       164 ~~~Y~~sK~a~~~~~~~l  181 (256)
T PRK12748        164 ELAYAATKGAIEAFTKSL  181 (256)
T ss_pred             chHHHHHHHHHHHHHHHH
Confidence            678999999999987754

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.8e-17  Score=128.95  Aligned_cols=134  Identities=14%  Similarity=-0.016  Sum_probs=105.5

Q ss_pred             EEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--c--cCCCCeEEEEccCCCHHHHHHHhcC---CCEEEEccccC
Q 029125           60 LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D--SWANNVIWHQGNLLSSDSWKEALDG---VTAVISCVGGF  132 (198)
Q Consensus        60 lvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~--~~~~~~~~~~~D~~d~~~~~~~~~~---~d~vi~~ag~~  132 (198)
                      +||||+|+||.+++++|+++|++|++++|+......  .  ....+++++.+|++|++++.++++.   +|++||++|..
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~   80 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT   80 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            599999999999999999999999999997543111  0  0134688999999999999988864   79999999853


Q ss_pred             C----------CCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          133 G----------SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       133 ~----------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      .          .+...+++|+.++.++.++....+.++||++||.....+.++...|+.+|++.+.+++..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l  151 (230)
T PRK07041         81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGL  151 (230)
T ss_pred             CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHHH
Confidence            2          124457899999999998665556679999999543344566778999999999988764

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.73  E-value=7.4e-17  Score=128.13  Aligned_cols=139  Identities=16%  Similarity=0.153  Sum_probs=105.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc----cCCCCeEEEEccCCCHHHHHHHhc------CCCE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD----SWANNVIWHQGNLLSSDSWKEALD------GVTA  124 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~------~~d~  124 (198)
                      ++++++||||+|+||.+++++|+++|++|++++|++......    ....++.++.+|+.|.+++.++++      .+|+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~   83 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV   83 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence            467899999999999999999999999999999975431110    123478899999999988777654      5799


Q ss_pred             EEEccccCCC----------CccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          125 VISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       125 vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      |||++|....          +...+++|+.++.++++.+..    .+.++++++||.....+......|+.+|.+.+.++
T Consensus        84 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  163 (263)
T PRK09072         84 LINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFS  163 (263)
T ss_pred             EEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHHHHHHH
Confidence            9999986421          134567999999988888743    34568999988433334455678999999988776


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       164 ~~l  166 (263)
T PRK09072        164 EAL  166 (263)
T ss_pred             HHH
Confidence            654

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.73  E-value=5e-17  Score=130.98  Aligned_cols=140  Identities=12%  Similarity=0.101  Sum_probs=105.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC---------CCccc-----ccCCCCeEEEEccCCCHHHHHHHh
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG---------RSSLR-----DSWANNVIWHQGNLLSSDSWKEAL  119 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~---------~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~  119 (198)
                      .++++++||||+++||.+++++|+++|++|++++|+.         +....     .....++.++.+|++|.+++.+++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            3568999999999999999999999999999998764         11000     011245778999999998887765


Q ss_pred             c-------CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cC------CCEEEEeeccccCCC
Q 029125          120 D-------GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG------VKRFVYISAADFGVA  172 (198)
Q Consensus       120 ~-------~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~------~~~~v~~Ss~~~~~~  172 (198)
                      +       .+|++|||||...          .+...+++|+.+++.+.+++..    ..      .++||++||...-.+
T Consensus        84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~  163 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG  163 (286)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC
Confidence            4       5799999999642          2345688999999988877642    11      258999999544345


Q ss_pred             CCCcchHHHHHHHHHHHHHhh
Q 029125          173 NYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       173 ~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      .+....|+.+|++.+.+.+..
T Consensus       164 ~~~~~~Y~asKaal~~l~~~l  184 (286)
T PRK07791        164 SVGQGNYSAAKAGIAALTLVA  184 (286)
T ss_pred             CCCchhhHHHHHHHHHHHHHH
Confidence            556779999999999887753

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.73  E-value=5.5e-17  Score=128.29  Aligned_cols=137  Identities=18%  Similarity=0.112  Sum_probs=103.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---ccCCCCeEEEEccCCCHHHHHHHhc-------CCCEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v  125 (198)
                      +++++||||+|+||.++++.|+++|++|++++|+..+...   .....++.++.+|+.|.+++..+++       ++|+|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4689999999999999999999999999999997543211   1112468899999999998887665       48999


Q ss_pred             EEccccCCCC----------ccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 029125          126 ISCVGGFGSN----------SYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       126 i~~ag~~~~~----------~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      ||++|.....          ...+.+|+.+.+++++++    .+.+.++|+++||... ........|+.+|++.+.+++
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~-~~~~~~~~y~~sK~a~~~~~~  160 (257)
T PRK07074         82 VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNG-MAALGHPAYSAAKAGLIHYTK  160 (257)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhh-cCCCCCcccHHHHHHHHHHHH
Confidence            9999864311          223568899998888877    3345678999998421 112334589999999998887


Q ss_pred             hh
Q 029125          192 TR  193 (198)
Q Consensus       192 ~~  193 (198)
                      ..
T Consensus       161 ~~  162 (257)
T PRK07074        161 LL  162 (257)
T ss_pred             HH
Confidence            65

>PRK07069 short chain dehydrogenase; Validated

Probab=99.73  E-value=6.5e-17  Score=127.20  Aligned_cols=136  Identities=16%  Similarity=0.153  Sum_probs=100.0

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc---c----C-CCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD---S----W-ANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~---~----~-~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      +++||||+|+||.++++.|+++|++|++++|+..+....   .    . ...+..+.+|++|.+++.++++       ++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            489999999999999999999999999999873221110   0    0 1124568899999998876654       57


Q ss_pred             CEEEEccccCCC----------CccceehhhH----HHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          123 TAVISCVGGFGS----------NSYMYKINGT----ANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       123 d~vi~~ag~~~~----------~~~~~~~n~~----~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      |+||||+|....          +...+++|+.    ++..+++.+.+.+.++|+++||.....+.+....|+.+|.+.+.
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~  160 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS  160 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence            999999986431          2345678877    44566666666677899999995433344566789999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       161 ~~~~l  165 (251)
T PRK07069        161 LTKSI  165 (251)
T ss_pred             HHHHH
Confidence            87753

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.73  E-value=6.6e-17  Score=128.17  Aligned_cols=137  Identities=17%  Similarity=0.070  Sum_probs=100.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---c-cCCCCeEEEEccCCCHHHHHHHhc-------CCCEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D-SWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---~-~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v  125 (198)
                      |+++||||+|+||++++++|+++|++|++++|++.....   . ....++.++.+|++|++++.++++       ++|+|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            479999999999999999999999999999997543111   0 012367889999999998887764       58999


Q ss_pred             EEccccCCC------------CccceehhhHHHHHHHHH----HH-HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          126 ISCVGGFGS------------NSYMYKINGTANINAIRA----AS-EKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       126 i~~ag~~~~------------~~~~~~~n~~~~~~~~~a----~~-~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      |||+|....            +...+.+|+.+...+.+.    +. +.+.++||++||.....+.++...|+.+|++.+.
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~  160 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQ  160 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHH
Confidence            999995321            122346677766544443    22 2345699999996544555667789999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +.+..
T Consensus       161 ~~~~l  165 (259)
T PRK08340        161 LAKGV  165 (259)
T ss_pred             HHHHH
Confidence            88764

>TIGR02415 23BDH acetoin reductases

Probab=99.72  E-value=6.1e-17  Score=127.66  Aligned_cols=137  Identities=19%  Similarity=0.208  Sum_probs=103.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      |+++||||+|+||.+++++|+++|++|+++.|+......     .....++.++.+|++|++++.++++       .+|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            579999999999999999999999999999987432111     1113457889999999998877654       4799


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHHH----HcC-CCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKG-VKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      ||||+|...          .++..+++|+.+++.+++++.    +.+ .++|+++||.....+.+....|+.+|++.+.+
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  160 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGL  160 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHHH
Confidence            999998632          123457899999987776654    333 36899999854333455678999999999988


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      ++..
T Consensus       161 ~~~l  164 (254)
T TIGR02415       161 TQTA  164 (254)
T ss_pred             HHHH
Confidence            8753

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.72  E-value=7.7e-17  Score=140.60  Aligned_cols=116  Identities=17%  Similarity=0.206  Sum_probs=91.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC---eEEEeecCCCCccc------cc--------------------CCCCeEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLR------DS--------------------WANNVIWH  105 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~---~V~~l~r~~~~~~~------~~--------------------~~~~~~~~  105 (198)
                      ++++|+|||||||||++|+++|++.+.   +|+++.|..+....      ..                    ...++.++
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            578999999999999999999998753   78999996543100      00                    02468899


Q ss_pred             EccCCCH------HHHHHHhcCCCEEEEccccCCC---CccceehhhHHHHHHHHHHHHc-CCCEEEEeec-cccC
Q 029125          106 QGNLLSS------DSWKEALDGVTAVISCVGGFGS---NSYMYKINGTANINAIRAASEK-GVKRFVYISA-ADFG  170 (198)
Q Consensus       106 ~~D~~d~------~~~~~~~~~~d~vi~~ag~~~~---~~~~~~~n~~~~~~~~~a~~~~-~~~~~v~~Ss-~~~~  170 (198)
                      .+|++++      +....+.+++|+|||+|+....   .+..+++|+.|+.+++++|++. +.++|||+|| .+|+
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG  273 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNG  273 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeec
Confidence            9999986      4566677889999999997553   3456789999999999999886 4789999999 4444

>PRK08017 oxidoreductase; Provisional

Probab=99.72  E-value=6.8e-17  Score=127.53  Aligned_cols=135  Identities=18%  Similarity=0.049  Sum_probs=103.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--------CCCEEEEc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--------GVTAVISC  128 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--------~~d~vi~~  128 (198)
                      ++|+||||+|+||.++++.|+++|++|++++|+.++... ....++..+.+|+.|.+++..+++        ++|.+||+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR-MNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHH-HHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            589999999999999999999999999999997644211 112357889999999887766543        46899999


Q ss_pred             cccCC----------CCccceehhhHHHHHH----HHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          129 VGGFG----------SNSYMYKINGTANINA----IRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       129 ag~~~----------~~~~~~~~n~~~~~~~----~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      +|...          .+...+++|+.++.++    ++.+.+.+.++++++||.....+.+....|+.+|.+.|.+.+.
T Consensus        82 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~~~~  159 (256)
T PRK08017         82 AGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDA  159 (256)
T ss_pred             CCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHHHHH
Confidence            98532          1234578888888765    5556667778999999954334556678899999999987664

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.72  E-value=9.5e-17  Score=118.95  Aligned_cols=137  Identities=19%  Similarity=0.174  Sum_probs=106.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcccc--------cCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRD--------SWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~--------~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      ++++||||+|++|.+++++|+++|+ .|+++.|+.......        ....++.++.+|+++++++.++++       
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999996 688888865432110        112457789999999988877654       


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      .+|.|||++|...          .+...+++|+.++.++++++.+.+.++++++||.....+......|+.+|.+.+.++
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~  160 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPGQANYAAANAFLDALA  160 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCCchhhHHHHHHHHHHH
Confidence            3699999998532          124457899999999999998878889999998543334456678999999999988


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       161 ~~~  163 (180)
T smart00822      161 AHR  163 (180)
T ss_pred             HHH
Confidence            654

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.72  E-value=1.2e-16  Score=126.68  Aligned_cols=140  Identities=14%  Similarity=0.090  Sum_probs=103.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++++++||||+|+||.+++++|+++|++|+++.|+..+...      .....++.++.+|++|.+++.++++       
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g   84 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG   84 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999988885432111      1113457789999999998877664       


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcC-CCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKG-VKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                      ++|++|||+|...          .++..+++|+.+.+.+++.+    .+.+ .++||++||.....+.++...|+.+|++
T Consensus        85 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa  164 (261)
T PRK08936         85 TLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGG  164 (261)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHHHH
Confidence            5899999999532          12345789988887655544    4444 4689999995444455667789999988


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+.+..
T Consensus       165 ~~~~~~~l  172 (261)
T PRK08936        165 VKLMTETL  172 (261)
T ss_pred             HHHHHHHH
Confidence            88766653

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.72  E-value=8.9e-17  Score=125.67  Aligned_cols=137  Identities=20%  Similarity=0.213  Sum_probs=101.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      |+++||||+|+||.+++++|+++|++|+++.|+......      .....++.++.+|++|++++.++++       .+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            579999999999999999999999999999884222111      0113468899999999988776654       489


Q ss_pred             EEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          124 AVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      +||||+|...          .+...+++|+.++..+++.+    ++.+.++|+++||.....+......|+.+|.+.+.+
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~  160 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGF  160 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHHH
Confidence            9999998542          12344678888887755554    556677999999854333445567899999988877


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      ++..
T Consensus       161 ~~~l  164 (242)
T TIGR01829       161 TKAL  164 (242)
T ss_pred             HHHH
Confidence            6653

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.72  E-value=7.9e-17  Score=143.39  Aligned_cols=157  Identities=20%  Similarity=0.156  Sum_probs=113.6

Q ss_pred             cCCcccccccccCCC---CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---c---c-CCCCeEEEE
Q 029125           37 VDEPLKVEEAETVNV---PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D---S-WANNVIWHQ  106 (198)
Q Consensus        37 ~~~~~~~~~~~~~~~---~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---~---~-~~~~~~~~~  106 (198)
                      ..++|..++++....   ....+|+++||||+|+||++++++|+++|++|++++|+......   .   . ....+..+.
T Consensus       392 ~~eyw~~e~~kl~~~~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~  471 (676)
T TIGR02632       392 DIEYWPLEEAKLRRMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALK  471 (676)
T ss_pred             chhhhhhhHHhhccCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEE
Confidence            336676665433221   23457899999999999999999999999999999997543111   0   0 123577899


Q ss_pred             ccCCCHHHHHHHhc-------CCCEEEEccccCCC----------CccceehhhHHHHHHHHHH----HHcC-CCEEEEe
Q 029125          107 GNLLSSDSWKEALD-------GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKG-VKRFVYI  164 (198)
Q Consensus       107 ~D~~d~~~~~~~~~-------~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~----~~~~-~~~~v~~  164 (198)
                      +|++|.+++.++++       ++|+||||||....          |...+++|+.+.+.+.+.+    ++.+ .++||++
T Consensus       472 ~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~i  551 (676)
T TIGR02632       472 MDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFI  551 (676)
T ss_pred             CCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            99999999888775       68999999996421          2345678888887666554    3333 3589999


Q ss_pred             eccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          165 SAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       165 Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ||.....+.+....|+.+|++.+.+++..
T Consensus       552 SS~~a~~~~~~~~aY~aSKaA~~~l~r~l  580 (676)
T TIGR02632       552 ASKNAVYAGKNASAYSAAKAAEAHLARCL  580 (676)
T ss_pred             eChhhcCCCCCCHHHHHHHHHHHHHHHHH
Confidence            99533334455689999999999988764

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.72  E-value=7.6e-17  Score=126.69  Aligned_cols=137  Identities=14%  Similarity=0.154  Sum_probs=100.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      +++++||||+|+||.+++++|+++|++|++..++......      .....++.++.+|++|.+++.++++       .+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999998877654322111      1113457889999999988887765       58


Q ss_pred             CEEEEccccCCC-----------CccceehhhHHHHHHHHHHHHcC-------CCEEEEeeccc--cCCCCCCcchHHHH
Q 029125          123 TAVISCVGGFGS-----------NSYMYKINGTANINAIRAASEKG-------VKRFVYISAAD--FGVANYLLQGYYEG  182 (198)
Q Consensus       123 d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~~~~-------~~~~v~~Ss~~--~~~~~~~~~~Y~~s  182 (198)
                      |+||||+|....           +...+++|+.++.++++++.+.-       .++||++||..  ++. +.....|+.+
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-~~~~~~Y~~s  160 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGS-PGEYIDYAAS  160 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCC-CCCccchHHH
Confidence            999999986421           12457899999998888875421       24799999842  322 2223469999


Q ss_pred             HHHHHHHHHhh
Q 029125          183 KRAAETELLTR  193 (198)
Q Consensus       183 K~~~e~~l~~~  193 (198)
                      |++.|.+++..
T Consensus       161 Kaa~~~~~~~l  171 (248)
T PRK06123        161 KGAIDTMTIGL  171 (248)
T ss_pred             HHHHHHHHHHH
Confidence            99999987754

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.6e-16  Score=126.14  Aligned_cols=140  Identities=19%  Similarity=0.099  Sum_probs=106.2

Q ss_pred             CCCCeEEEEcCCc-hhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCC-CCeEEEEccCCCHHHHHHHhc-----
Q 029125           54 PPSEKLLVLGGNG-FVGSHICREALDRGLTVASLSRSGRSSLR------DSWA-NNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        54 ~~~~~vlvtGatG-~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~-~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      .++++++||||+| +||.++++.|+++|++|++++|+..+...      .... .++.++.+|++|++++..+++     
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3568999999997 79999999999999999999987543111      0012 357889999999988887664     


Q ss_pred             --CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cC-CCEEEEeeccccCCCCCCcchHHHHH
Q 029125          121 --GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGK  183 (198)
Q Consensus       121 --~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK  183 (198)
                        .+|+||||+|...          .+...+++|+.+.+.+++++..    .+ .++|+++||.....+..+...|+.+|
T Consensus        95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK  174 (262)
T PRK07831         95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAK  174 (262)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHHH
Confidence              5799999999532          2344577899999888877643    33 46899998854334455677899999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      ++.+.+++..
T Consensus       175 aal~~~~~~l  184 (262)
T PRK07831        175 AGVMALTRCS  184 (262)
T ss_pred             HHHHHHHHHH
Confidence            9999988765

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.72  E-value=8.1e-17  Score=125.95  Aligned_cols=135  Identities=16%  Similarity=0.128  Sum_probs=101.9

Q ss_pred             EEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------CCCEE
Q 029125           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (198)
Q Consensus        59 vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v  125 (198)
                      |+||||+|+||.+++++|+++|++|++++|+......      .....++.++.+|++|.+++..+++       .+|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999999999999999876432111      1123468899999999988877654       47999


Q ss_pred             EEccccCC----------CCccceehhhHHHHHHHHHHH-----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          126 ISCVGGFG----------SNSYMYKINGTANINAIRAAS-----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       126 i~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~-----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      |||+|...          .+...+++|+.+++++++++.     +.+.++||++||.....+.+....|+.+|++.+.+.
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~  160 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGAT  160 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHHH
Confidence            99998542          234467899999998888752     234568999999443334456678999999988776


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       161 ~~l  163 (239)
T TIGR01831       161 KAL  163 (239)
T ss_pred             HHH
Confidence            643

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK05855 short chain dehydrogenase; Validated

Probab=99.72  E-value=8.5e-17  Score=140.51  Aligned_cols=139  Identities=14%  Similarity=0.056  Sum_probs=107.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      ..++++||||+|+||++++++|+++|++|++++|+..+...     .....++.++.+|++|++++.++++       .+
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  393 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP  393 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            45789999999999999999999999999999997543211     1113467899999999998887765       48


Q ss_pred             CEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcC-CCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKG-VKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      |+||||||...          .+...+++|+.|+.++++++.    +.+ .++||++||...-.+.+....|+.+|++.+
T Consensus       394 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  473 (582)
T PRK05855        394 DIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVL  473 (582)
T ss_pred             cEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHHHH
Confidence            99999999642          123457799999998888763    333 358999999543345566789999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       474 ~~~~~l  479 (582)
T PRK05855        474 MLSECL  479 (582)
T ss_pred             HHHHHH
Confidence            877653

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.7e-16  Score=125.79  Aligned_cols=140  Identities=13%  Similarity=0.103  Sum_probs=108.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc---CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD---GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~  124 (198)
                      .++++++|||++|+||.++++.|+++|++|++++|+..+...      .....++.++.+|++|++++.++++   .+|+
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~   84 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDI   84 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence            356899999999999999999999999999999997543211      1113467889999999999887765   5899


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      +|||+|...          .+...+++|+.+.+.+++++    .+.+.++||++||.....+......|+.+|.+.+.+.
T Consensus        85 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~al~~~~  164 (259)
T PRK06125         85 LVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFT  164 (259)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHHHHHHHH
Confidence            999998532          23455789999998888776    3344468999998544445555678999999999887


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       165 ~~l  167 (259)
T PRK06125        165 RAL  167 (259)
T ss_pred             HHH
Confidence            754

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.71  E-value=1.5e-16  Score=151.53  Aligned_cols=140  Identities=23%  Similarity=0.341  Sum_probs=108.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCC----CeEEEeecCCCCccc---------------ccCCCCeEEEEccCCC----
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRG----LTVASLSRSGRSSLR---------------DSWANNVIWHQGNLLS----  111 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g----~~V~~l~r~~~~~~~---------------~~~~~~~~~~~~D~~d----  111 (198)
                      ..++|+|||||||+|.+++++|++++    ++|+|+.|.......               .....++.++.+|+.+    
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            45799999999999999999999887    799999997543110               0112468999999964    


Q ss_pred             --HHHHHHHhcCCCEEEEccccCCC---CccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCC--------------
Q 029125          112 --SDSWKEALDGVTAVISCVGGFGS---NSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGV--------------  171 (198)
Q Consensus       112 --~~~~~~~~~~~d~vi~~ag~~~~---~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~--------------  171 (198)
                        .+.+.++.+++|+|||+|+....   .......|+.|+.+++++|.+.++++|+|+|| .+|+.              
T Consensus      1050 l~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~ 1129 (1389)
T TIGR03443      1050 LSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAG 1129 (1389)
T ss_pred             cCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhcc
Confidence              46677778899999999997542   23344589999999999999888899999999 44431              


Q ss_pred             ----C---------CCCcchHHHHHHHHHHHHHhhC
Q 029125          172 ----A---------NYLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       172 ----~---------~~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                          +         .....+|+.||+++|.++..+.
T Consensus      1130 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~ 1165 (1389)
T TIGR03443      1130 GAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAG 1165 (1389)
T ss_pred             CCCCCcccccccccccCCCChHHHHHHHHHHHHHHH
Confidence                0         0123569999999999998764

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2e-16  Score=123.91  Aligned_cols=140  Identities=16%  Similarity=0.207  Sum_probs=102.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCC--HHHHHHHh------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLS--SDSWKEAL------  119 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d--~~~~~~~~------  119 (198)
                      .++++++||||+|+||.+++++|+++|++|++++|++.....      ......+.++.+|+.|  .+++..++      
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            346899999999999999999999999999999998643211      0112346778899975  33444332      


Q ss_pred             --cCCCEEEEccccCCC-----------CccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHH
Q 029125          120 --DGVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEG  182 (198)
Q Consensus       120 --~~~d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~s  182 (198)
                        ..+|+||||+|....           +...+++|+.++.++++++.+    .+..+++++||.....+.+....|+.+
T Consensus        84 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  163 (239)
T PRK08703         84 TQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGAS  163 (239)
T ss_pred             hCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHHh
Confidence              458999999995321           123578999999888887743    345699999985434445556789999


Q ss_pred             HHHHHHHHHhh
Q 029125          183 KRAAETELLTR  193 (198)
Q Consensus       183 K~~~e~~l~~~  193 (198)
                      |++.+.+++..
T Consensus       164 Kaa~~~~~~~l  174 (239)
T PRK08703        164 KAALNYLCKVA  174 (239)
T ss_pred             HHHHHHHHHHH
Confidence            99999987754

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.71  E-value=1.8e-16  Score=124.61  Aligned_cols=137  Identities=17%  Similarity=0.158  Sum_probs=98.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      +++|+||||+|+||..+++.|+++|++|+++.++......      .....++.++.+|++|.+++.++++       .+
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            5799999999999999999999999999877654322111      1113468899999999988876654       58


Q ss_pred             CEEEEccccCCC-----------CccceehhhHHHHHHHHHHHHc----C---CCEEEEeeccc--cCCCCCCcchHHHH
Q 029125          123 TAVISCVGGFGS-----------NSYMYKINGTANINAIRAASEK----G---VKRFVYISAAD--FGVANYLLQGYYEG  182 (198)
Q Consensus       123 d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~~~----~---~~~~v~~Ss~~--~~~~~~~~~~Y~~s  182 (198)
                      |+||||+|....           +...+.+|+.+++.+++++.+.    +   ..+||++||..  ++. ......|+.+
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~-~~~~~~Y~~s  160 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGS-PNEYVDYAGS  160 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCC-CCCCcccHhh
Confidence            999999985421           1234789999998877654321    1   24699999842  232 2224579999


Q ss_pred             HHHHHHHHHhh
Q 029125          183 KRAAETELLTR  193 (198)
Q Consensus       183 K~~~e~~l~~~  193 (198)
                      |++.+.+++..
T Consensus       161 K~~~~~~~~~l  171 (248)
T PRK06947        161 KGAVDTLTLGL  171 (248)
T ss_pred             HHHHHHHHHHH
Confidence            99999877654

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=1.9e-16  Score=126.89  Aligned_cols=138  Identities=12%  Similarity=0.018  Sum_probs=103.2

Q ss_pred             CCCeEEEEcCC--chhHHHHHHHHHHCCCeEEEeecCCCC--ccc---ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           55 PSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRS--SLR---DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        55 ~~~~vlvtGat--G~iG~~l~~~l~~~g~~V~~l~r~~~~--~~~---~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .+|+++||||+  ++||+++++.|+++|++|++.+|+...  ...   ...... .++.+|++|.+++.++++       
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g   82 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDLG   82 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46899999997  799999999999999999999887421  111   111223 678999999998887664       


Q ss_pred             CCCEEEEccccCC--------------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHH
Q 029125          121 GVTAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKR  184 (198)
Q Consensus       121 ~~d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~  184 (198)
                      .+|++|||||...              .|+..+++|+.+++.+.+++...  ..++||++||.....+.+....|+.+|+
T Consensus        83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  162 (274)
T PRK08415         83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPHYNVMGVAKA  162 (274)
T ss_pred             CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCcchhhhhHHH
Confidence            5799999999532              12446899999999888887542  1258999998543334455678999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.+.+.+..
T Consensus       163 al~~l~~~l  171 (274)
T PRK08415        163 ALESSVRYL  171 (274)
T ss_pred             HHHHHHHHH
Confidence            999887754

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.71  E-value=9.6e-17  Score=142.63  Aligned_cols=140  Identities=14%  Similarity=0.111  Sum_probs=108.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++++++||||+|+||.+++++|+++|++|++++|+.....+     .....++.++.+|++|.+++.++++       +
T Consensus       369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  448 (657)
T PRK07201        369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGH  448 (657)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            456899999999999999999999999999999997543111     1113468899999999998887775       5


Q ss_pred             CCEEEEccccCC------------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          122 VTAVISCVGGFG------------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       122 ~d~vi~~ag~~~------------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                      +|++|||||...            .+...+++|+.++.++++++    ++.+.++||++||.....+.+....|+.+|++
T Consensus       449 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  528 (657)
T PRK07201        449 VDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAA  528 (657)
T ss_pred             CCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHHHH
Confidence            899999999531            12345789999998877765    44566799999995433344556789999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+++..
T Consensus       529 ~~~~~~~l  536 (657)
T PRK07201        529 LDAFSDVA  536 (657)
T ss_pred             HHHHHHHH
Confidence            99987754

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.71  E-value=1e-16  Score=127.64  Aligned_cols=137  Identities=16%  Similarity=0.129  Sum_probs=99.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-------ccCCCCeEEEEccCCCHHHH----HHHh------
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSW----KEAL------  119 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-------~~~~~~~~~~~~D~~d~~~~----~~~~------  119 (198)
                      +.++||||+|+||.+++++|+++|++|+++.|+......       ......+.++.+|++|.+.+    .+++      
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            579999999999999999999999999998765322111       11123566789999998644    3332      


Q ss_pred             -cCCCEEEEccccCCC---------------------CccceehhhHHHHHHHHHHHHcC----------CCEEEEeecc
Q 029125          120 -DGVTAVISCVGGFGS---------------------NSYMYKINGTANINAIRAASEKG----------VKRFVYISAA  167 (198)
Q Consensus       120 -~~~d~vi~~ag~~~~---------------------~~~~~~~n~~~~~~~~~a~~~~~----------~~~~v~~Ss~  167 (198)
                       .++|+||||||....                     +...+++|+.+++.+++++....          ..++++++|.
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~  161 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA  161 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence             358999999995321                     12347899999998888764321          2368888885


Q ss_pred             ccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          168 DFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       168 ~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ....+.+...+|+.+|++.+.+++..
T Consensus       162 ~~~~~~~~~~~Y~asK~a~~~~~~~l  187 (267)
T TIGR02685       162 MTDQPLLGFTMYTMAKHALEGLTRSA  187 (267)
T ss_pred             hccCCCcccchhHHHHHHHHHHHHHH
Confidence            44455566789999999999888764

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=1.6e-16  Score=126.05  Aligned_cols=140  Identities=10%  Similarity=-0.019  Sum_probs=104.4

Q ss_pred             CCCCeEEEEcCC--chhHHHHHHHHHHCCCeEEEeecCCCCc--ccc--cCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSS--LRD--SWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGat--G~iG~~l~~~l~~~g~~V~~l~r~~~~~--~~~--~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++|+++||||+  ++||.+++++|+++|++|++.+|+....  ...  .....+.++.+|++|.+++.++++       
T Consensus         8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   87 (258)
T PRK07533          8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG   87 (258)
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence            457899999998  4999999999999999999999875321  111  011235678999999988877654       


Q ss_pred             CCCEEEEccccCC--------------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHH
Q 029125          121 GVTAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKR  184 (198)
Q Consensus       121 ~~d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~  184 (198)
                      .+|++|||||...              .|+..+++|+.+.+.+.+++...  ..++|+++||.....+.+....|+.+|+
T Consensus        88 ~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~~~~Y~asKa  167 (258)
T PRK07533         88 RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVENYNLMGPVKA  167 (258)
T ss_pred             CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCccchhhHHHHH
Confidence            5899999998532              12456789999999888877442  1258999998543334455678999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.+.+.+..
T Consensus       168 al~~l~~~l  176 (258)
T PRK07533        168 ALESSVRYL  176 (258)
T ss_pred             HHHHHHHHH
Confidence            999887754

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.7e-16  Score=123.10  Aligned_cols=138  Identities=14%  Similarity=0.071  Sum_probs=104.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-----CCCEEEEccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-----GVTAVISCVG  130 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~d~vi~~ag  130 (198)
                      |++++||||+|+||++++++|+++|++|++++|+..+... ....++.++.+|++|.+++.++++     ++|+|||++|
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag   79 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAA-LQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAG   79 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH-HHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCC
Confidence            5789999999999999999999999999999987544221 112346789999999998887642     4899999998


Q ss_pred             cCC------------CCccceehhhHHHHHHHHHHHHc---CCCEEEEeeccc--cCCC-CCCcchHHHHHHHHHHHHHh
Q 029125          131 GFG------------SNSYMYKINGTANINAIRAASEK---GVKRFVYISAAD--FGVA-NYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       131 ~~~------------~~~~~~~~n~~~~~~~~~a~~~~---~~~~~v~~Ss~~--~~~~-~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      ...            .++..+++|+.+++++++++...   ..++++++||..  ++.. ..+...|+.+|.+.+.+++.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~  159 (222)
T PRK06953         80 VYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKAALNDALRA  159 (222)
T ss_pred             cccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCccccHHhHHHHHHHHHH
Confidence            652            12446889999999999888642   235799998842  3322 22224699999999998886


Q ss_pred             hC
Q 029125          193 RY  194 (198)
Q Consensus       193 ~~  194 (198)
                      ..
T Consensus       160 ~~  161 (222)
T PRK06953        160 AS  161 (222)
T ss_pred             Hh
Confidence            53

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.5e-16  Score=120.17  Aligned_cols=124  Identities=19%  Similarity=0.109  Sum_probs=99.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc---CCCEEEEccccCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD---GVTAVISCVGGFG  133 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~vi~~ag~~~  133 (198)
                      |+++||||+|+||.+++++|+++ ++|++++|+..            .+.+|++|+++++++++   ++|+||||+|...
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~   67 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------DVQVDITDPASIRALFEKVGKVDAVVSAAGKVH   67 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------ceEecCCChHHHHHHHHhcCCCCEEEECCCCCC
Confidence            47999999999999999999999 99999998632            36789999999988776   6899999998532


Q ss_pred             ----------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          134 ----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       134 ----------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                                .+...+++|+.++.++++++...  ...+|+++||.....+.+....|+.+|++.+.+.+..
T Consensus        68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~l  139 (199)
T PRK07578         68 FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAA  139 (199)
T ss_pred             CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHH
Confidence                      13445788999999999887542  3357999998543444566778999999999887753

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=4e-16  Score=123.81  Aligned_cols=140  Identities=12%  Similarity=0.057  Sum_probs=104.0

Q ss_pred             CCCCeEEEEcCC--chhHHHHHHHHHHCCCeEEEeecCCCCc--cc---cc-CCCCeEEEEccCCCHHHHHHHhc-----
Q 029125           54 PPSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSS--LR---DS-WANNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        54 ~~~~~vlvtGat--G~iG~~l~~~l~~~g~~V~~l~r~~~~~--~~---~~-~~~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      .++|+++||||+  ++||.+++++|+++|++|++.+|+....  .+   .. ...++.++.+|++|++++.++++     
T Consensus         5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (257)
T PRK08594          5 LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE   84 (257)
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence            356899999997  8999999999999999999998753211  11   11 12467889999999988877664     


Q ss_pred             --CCCEEEEccccCCC--------------CccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHH
Q 029125          121 --GVTAVISCVGGFGS--------------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEG  182 (198)
Q Consensus       121 --~~d~vi~~ag~~~~--------------~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~s  182 (198)
                        ++|++|||+|....              |...+++|+.+.+.+++++...  ...+||++||.....+.+....|+.+
T Consensus        85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  164 (257)
T PRK08594         85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYNVMGVA  164 (257)
T ss_pred             CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCCchhHHH
Confidence              48999999985321              1234678888888777776542  23589999995444444556789999


Q ss_pred             HHHHHHHHHhh
Q 029125          183 KRAAETELLTR  193 (198)
Q Consensus       183 K~~~e~~l~~~  193 (198)
                      |++.+.+.+..
T Consensus       165 Kaal~~l~~~l  175 (257)
T PRK08594        165 KASLEASVKYL  175 (257)
T ss_pred             HHHHHHHHHHH
Confidence            99999888754

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.71  E-value=1.1e-16  Score=124.74  Aligned_cols=135  Identities=16%  Similarity=0.096  Sum_probs=102.4

Q ss_pred             EEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------CCCEE
Q 029125           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (198)
Q Consensus        59 vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v  125 (198)
                      |+|||++|+||++++++|+++|++|++++|+..+...      .....++.++.+|++|.+++.++++       .+|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5899999999999999999999999999987532111      1112357899999999998887765       47999


Q ss_pred             EEccccCCC----------CccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 029125          126 ISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       126 i~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      ||++|....          +...+++|+.++.++++++..    .+.++|+++||...-.+.+....|+.+|.+.+.+++
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~~  160 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTK  160 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHHH
Confidence            999996431          234578999999999888864    456699999994322233456789999999888766


Q ss_pred             hh
Q 029125          192 TR  193 (198)
Q Consensus       192 ~~  193 (198)
                      ..
T Consensus       161 ~l  162 (239)
T TIGR01830       161 SL  162 (239)
T ss_pred             HH
Confidence            54

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=9.3e-17  Score=128.47  Aligned_cols=140  Identities=10%  Similarity=-0.005  Sum_probs=103.4

Q ss_pred             CCCCeEEEEcCCc--hhHHHHHHHHHHCCCeEEEeecCCCCc--cccc--CCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRSS--LRDS--WANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG--~iG~~l~~~l~~~g~~V~~l~r~~~~~--~~~~--~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++|+++||||++  +||++++++|+++|++|++.+|+....  ....  ......++.+|++|.+++.++++       
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG   84 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            3568999999996  999999999999999999998864211  0110  11223578999999998887764       


Q ss_pred             CCCEEEEccccCC--------------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHH
Q 029125          121 GVTAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKR  184 (198)
Q Consensus       121 ~~d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~  184 (198)
                      .+|++|||||...              .|+..+++|+.+.+++++++...  ..++||++||.....+.+....|+.+|+
T Consensus        85 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  164 (271)
T PRK06505         85 KLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNYNVMGVAKA  164 (271)
T ss_pred             CCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCccchhhhhHH
Confidence            5899999999532              12345789999999888877532  1258999998543334455678999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.+.+.+..
T Consensus       165 Al~~l~r~l  173 (271)
T PRK06505        165 ALEASVRYL  173 (271)
T ss_pred             HHHHHHHHH
Confidence            999887754

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.71  E-value=1.2e-16  Score=125.34  Aligned_cols=138  Identities=17%  Similarity=0.086  Sum_probs=99.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEe-ecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASL-SRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l-~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      |++++||||+|+||.+++++|+++|++|+++ .|+..+...     .....++.++.+|+.|++++.++++       .+
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i   80 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL   80 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            4689999999999999999999999999875 444322110     1112357889999999998887765       46


Q ss_pred             CEEEEccccCCC-----------CccceehhhHHHHHHHHHHHHc-------CCCEEEEeecc-ccCCCCCCcchHHHHH
Q 029125          123 TAVISCVGGFGS-----------NSYMYKINGTANINAIRAASEK-------GVKRFVYISAA-DFGVANYLLQGYYEGK  183 (198)
Q Consensus       123 d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~~~-------~~~~~v~~Ss~-~~~~~~~~~~~Y~~sK  183 (198)
                      |+|||++|....           +...+++|+.++..+++++...       ..++||++||. .+...+.....|+.+|
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK  160 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK  160 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence            899999996421           1346789999998777766432       13579999994 2222222235799999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      .+.+.+++..
T Consensus       161 ~~~~~~~~~l  170 (247)
T PRK09730        161 GAIDTLTTGL  170 (247)
T ss_pred             HHHHHHHHHH
Confidence            9999887754

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.70  E-value=2.3e-16  Score=124.96  Aligned_cols=140  Identities=16%  Similarity=0.078  Sum_probs=103.6

Q ss_pred             CCCCeEEEEcCCc--hhHHHHHHHHHHCCCeEEEeecCCC---------Cc-c---c---ccCCCCeEEEEccCCCHHHH
Q 029125           54 PPSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGR---------SS-L---R---DSWANNVIWHQGNLLSSDSW  115 (198)
Q Consensus        54 ~~~~~vlvtGatG--~iG~~l~~~l~~~g~~V~~l~r~~~---------~~-~---~---~~~~~~~~~~~~D~~d~~~~  115 (198)
                      .++++++||||+|  +||.+++++|+++|++|++++|...         .. .   .   .....++.++.+|++|.+++
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i   83 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP   83 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            4678999999984  8999999999999999998764311         00 0   0   11124578899999999988


Q ss_pred             HHHhc-------CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCC
Q 029125          116 KEALD-------GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANY  174 (198)
Q Consensus       116 ~~~~~-------~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~  174 (198)
                      .++++       .+|++|||+|...          .++..+++|+.+.+.+.+.+    .+.+.++||++||.....+.+
T Consensus        84 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  163 (256)
T PRK12859         84 KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMV  163 (256)
T ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCC
Confidence            87764       4799999998542          12345789999998775544    334456999999954444556


Q ss_pred             CcchHHHHHHHHHHHHHhh
Q 029125          175 LLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       175 ~~~~Y~~sK~~~e~~l~~~  193 (198)
                      +...|+.+|++.+.+.+..
T Consensus       164 ~~~~Y~~sK~a~~~l~~~l  182 (256)
T PRK12859        164 GELAYAATKGAIDALTSSL  182 (256)
T ss_pred             CchHHHHHHHHHHHHHHHH
Confidence            6789999999999887654

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.70  E-value=2e-16  Score=132.64  Aligned_cols=135  Identities=18%  Similarity=0.114  Sum_probs=101.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc--cCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD--SWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      .++|+|+||||+|+||++++++|+++|++|++++|+.++....  ....++..+.+|++|.+++.+.++++|++|||||.
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi  255 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI  255 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence            4578999999999999999999999999999999875432111  11224678899999999999999999999999985


Q ss_pred             CC-------CCccceehhhHHHHHHHHHHHH----cCC----CEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          132 FG-------SNSYMYKINGTANINAIRAASE----KGV----KRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       132 ~~-------~~~~~~~~n~~~~~~~~~a~~~----~~~----~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      ..       .+...+++|+.++.++++++..    .+.    ..++++|+.  +...+....|++||++.+.+.
T Consensus       256 ~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa--~~~~~~~~~Y~ASKaAl~~l~  327 (406)
T PRK07424        256 NVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEA--EVNPAFSPLYELSKRALGDLV  327 (406)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccc--cccCCCchHHHHHHHHHHHHH
Confidence            42       2345689999999999888743    221    234555543  222233457999999998864

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.70  E-value=2.2e-16  Score=126.35  Aligned_cols=139  Identities=10%  Similarity=0.019  Sum_probs=104.0

Q ss_pred             CCCeEEEEcCC--chhHHHHHHHHHHCCCeEEEeecCCC--Ccccc--cCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           55 PSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGR--SSLRD--SWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        55 ~~~~vlvtGat--G~iG~~l~~~l~~~g~~V~~l~r~~~--~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .+|+++||||+  ++||.+++++|+++|++|++..|+..  +..+.  ........+.+|++|+++++++++       .
T Consensus         9 ~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   88 (272)
T PRK08159          9 AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGK   88 (272)
T ss_pred             cCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            46899999997  89999999999999999998877531  11110  011235678999999998887664       4


Q ss_pred             CCEEEEccccCC--------------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          122 VTAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       122 ~d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                      +|++|||||...              .|...+++|+.+++.+++++...  ..++||++||.....+.+....|+.+|++
T Consensus        89 iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~~~~Y~asKaa  168 (272)
T PRK08159         89 LDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPHYNVMGVAKAA  168 (272)
T ss_pred             CcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCcchhhhhHHHH
Confidence            899999998542              12446789999999998887543  23589999985433444556789999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+.+..
T Consensus       169 l~~l~~~l  176 (272)
T PRK08159        169 LEASVKYL  176 (272)
T ss_pred             HHHHHHHH
Confidence            99887754

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.70  E-value=3.7e-16  Score=124.49  Aligned_cols=140  Identities=11%  Similarity=0.027  Sum_probs=102.9

Q ss_pred             CCCCeEEEEcCCc--hhHHHHHHHHHHCCCeEEEeecCCCC--cccc--cCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRS--SLRD--SWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG--~iG~~l~~~l~~~g~~V~~l~r~~~~--~~~~--~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++|+++||||++  +||.++++.|+++|++|++.+|+...  ..+.  .....+.++.+|++|+++++++++       
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   83 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP   83 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence            3568999999985  99999999999999999998886311  1111  112346688999999999887764       


Q ss_pred             CCCEEEEccccCCC---------------CccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHH
Q 029125          121 GVTAVISCVGGFGS---------------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGK  183 (198)
Q Consensus       121 ~~d~vi~~ag~~~~---------------~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK  183 (198)
                      .+|++|||||....               |+..+++|+.+.+.+.+++...  ..++||++||.....+.+....|+.+|
T Consensus        84 ~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~asK  163 (262)
T PRK07984         84 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAK  163 (262)
T ss_pred             CCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcchhHHHH
Confidence            47999999985321               1234688999988777776432  225899999854434455567899999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      .+.+.+++..
T Consensus       164 aal~~l~~~l  173 (262)
T PRK07984        164 ASLEANVRYM  173 (262)
T ss_pred             HHHHHHHHHH
Confidence            9999888754

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.70  E-value=3.3e-16  Score=124.32  Aligned_cols=139  Identities=14%  Similarity=0.062  Sum_probs=104.2

Q ss_pred             CCCeEEEEcCC--chhHHHHHHHHHHCCCeEEEeecCCCCc-----ccc--cCCCCeEEEEccCCCHHHHHHHhc-----
Q 029125           55 PSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSS-----LRD--SWANNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        55 ~~~~vlvtGat--G~iG~~l~~~l~~~g~~V~~l~r~~~~~-----~~~--~~~~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      ++|+++||||+  ++||.+++++|+++|++|++..|+.+..     ...  .....+.++.+|++|++++.++++     
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            56899999986  7999999999999999998887643211     000  112346788999999998887664     


Q ss_pred             --CCCEEEEccccCC--------------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHH
Q 029125          121 --GVTAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEG  182 (198)
Q Consensus       121 --~~d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~s  182 (198)
                        ++|++|||+|...              .|+..+++|+.+++.+.+++...  ..++||++||.....+.+....|+.+
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~as  164 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNYNVMGVA  164 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcccchhhHH
Confidence              5899999998532              12456899999999888887432  13689999995433455566789999


Q ss_pred             HHHHHHHHHhh
Q 029125          183 KRAAETELLTR  193 (198)
Q Consensus       183 K~~~e~~l~~~  193 (198)
                      |++.+.+.+..
T Consensus       165 Kaal~~l~~~l  175 (258)
T PRK07370        165 KAALEASVRYL  175 (258)
T ss_pred             HHHHHHHHHHH
Confidence            99999887754

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.70  E-value=1.7e-16  Score=125.61  Aligned_cols=140  Identities=17%  Similarity=0.215  Sum_probs=105.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCe-EEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLT-VASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~-V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++++++||||+|+||..++++|+++|++ |++++|+..+...     ......+.++.+|++|++++.++++       
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG   83 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            35689999999999999999999999998 9999987543211     1113457789999999998887764       


Q ss_pred             CCCEEEEccccCCC----------CccceehhhHHHHHHHHHHHH----cC-CCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 ~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~----~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                      ++|+|||++|....          +...+++|+.+.+++++++.+    .+ .++|+++||...-.+.+....|+.+|.+
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a  163 (260)
T PRK06198         84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGA  163 (260)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHHHH
Confidence            58999999986421          134578999999988888743    22 3589999984322334556789999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .|.+++..
T Consensus       164 ~~~~~~~~  171 (260)
T PRK06198        164 LATLTRNA  171 (260)
T ss_pred             HHHHHHHH
Confidence            99988754

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.70  E-value=2.3e-16  Score=125.97  Aligned_cols=136  Identities=14%  Similarity=0.041  Sum_probs=100.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCC-CeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWAN-NVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~-~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      |+++||||+|+||.++++.|+++|++|++++|+.+....     ..... .+.++.+|++|++++.++++       ++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            479999999999999999999999999999987543111     00112 24567899999988776654       479


Q ss_pred             EEEEccccCC----------CCccceehhhHHHHHHHHHHHH-----cCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          124 AVISCVGGFG----------SNSYMYKINGTANINAIRAASE-----KGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~-----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      +||||+|...          .+...+++|+.+++.+++++..     ...++||++||.....+.+....|+.+|++.+.
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  160 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRG  160 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHHH
Confidence            9999998532          1234578999999999988642     224689999995433344556789999998887


Q ss_pred             HHHh
Q 029125          189 ELLT  192 (198)
Q Consensus       189 ~l~~  192 (198)
                      +.+.
T Consensus       161 ~~~~  164 (272)
T PRK07832        161 LSEV  164 (272)
T ss_pred             HHHH
Confidence            6654

>PLN00016 RNA-binding protein; Provisional

Probab=99.70  E-value=2e-16  Score=132.23  Aligned_cols=126  Identities=20%  Similarity=0.265  Sum_probs=94.7

Q ss_pred             CCCCeEEEE----cCCchhHHHHHHHHHHCCCeEEEeecCCCCccc----------ccCCCCeEEEEccCCCHHHHHHHh
Q 029125           54 PPSEKLLVL----GGNGFVGSHICREALDRGLTVASLSRSGRSSLR----------DSWANNVIWHQGNLLSSDSWKEAL  119 (198)
Q Consensus        54 ~~~~~vlvt----GatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----------~~~~~~~~~~~~D~~d~~~~~~~~  119 (198)
                      ..+++|+||    |||||||++|+++|+++|++|++++|+......          .....+++++.+|+.|   +.+++
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~  126 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKV  126 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhh
Confidence            456789999    999999999999999999999999998643110          0012358899999876   33443


Q ss_pred             --cCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCCC-C------cchHHHHHHHHHHH
Q 029125          120 --DGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVANY-L------LQGYYEGKRAAETE  189 (198)
Q Consensus       120 --~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~~-~------~~~Y~~sK~~~e~~  189 (198)
                        .++|+|||+++.          +..++.+++++|++.++++|||+|| .+|+.... +      ..++. +|..+|.+
T Consensus       127 ~~~~~d~Vi~~~~~----------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~-sK~~~E~~  195 (378)
T PLN00016        127 AGAGFDVVYDNNGK----------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA-GHLEVEAY  195 (378)
T ss_pred             ccCCccEEEeCCCC----------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc-hHHHHHHH
Confidence              479999998763          2456788999999999999999999 56764321 1      12233 89999999


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      +++.
T Consensus       196 l~~~  199 (378)
T PLN00016        196 LQKL  199 (378)
T ss_pred             HHHc
Confidence            8764

>PRK06484 short chain dehydrogenase; Validated

Probab=99.69  E-value=3.5e-16  Score=135.58  Aligned_cols=139  Identities=19%  Similarity=0.148  Sum_probs=107.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v  125 (198)
                      ++|+++||||+++||.+++++|+++|++|++++|+..+...  .....++.++.+|++|++++.++++       ++|++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL   83 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            56899999999999999999999999999999997554211  1123467789999999998877664       58999


Q ss_pred             EEccccCC------------CCccceehhhHHHHHHHHHHHH----cCCC-EEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          126 ISCVGGFG------------SNSYMYKINGTANINAIRAASE----KGVK-RFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       126 i~~ag~~~------------~~~~~~~~n~~~~~~~~~a~~~----~~~~-~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      |||+|...            .++..+++|+.+++.+++++..    .+.+ +||++||...-.+.+....|+.+|++.+.
T Consensus        84 i~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal~~  163 (520)
T PRK06484         84 VNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVIS  163 (520)
T ss_pred             EECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHHHH
Confidence            99998621            1245678999999988888754    2333 89999995444445566789999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +.+..
T Consensus       164 l~~~l  168 (520)
T PRK06484        164 LTRSL  168 (520)
T ss_pred             HHHHH
Confidence            87653

>PRK08324 short chain dehydrogenase; Validated

Probab=99.69  E-value=2.9e-16  Score=140.18  Aligned_cols=140  Identities=16%  Similarity=0.171  Sum_probs=109.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCC--CCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWA--NNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~--~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      ..+++|+||||+|+||.++++.|+++|++|++++|+......  ....  .++.++.+|++|++++.++++       ++
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~i  499 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGV  499 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            356899999999999999999999999999999998643211  1111  368899999999998877765       68


Q ss_pred             CEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCC-CEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGV-KRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~-~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      |+||||+|...          .+...+++|+.++..+++++.    +.+. ++||++||...-.+.+....|+.+|++.+
T Consensus       500 DvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKaa~~  579 (681)
T PRK08324        500 DIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAEL  579 (681)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHHHHH
Confidence            99999999542          234567899999998877764    3443 68999999543334456778999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       580 ~l~~~l  585 (681)
T PRK08324        580 HLVRQL  585 (681)
T ss_pred             HHHHHH
Confidence            988765

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.68  E-value=3.8e-16  Score=127.79  Aligned_cols=139  Identities=15%  Similarity=0.144  Sum_probs=100.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccC-CCCeEEEEccCCC--HHHHH---HHhcC-
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSW-ANNVIWHQGNLLS--SDSWK---EALDG-  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~-~~~~~~~~~D~~d--~~~~~---~~~~~-  121 (198)
                      .++.++||||+|+||++++++|+++|++|++++|++++...      ... ...+..+.+|+++  .+.+.   +.+.+ 
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            36799999999999999999999999999999998654111      111 1356778899985  33333   33444 


Q ss_pred             -CCEEEEccccCCC------------CccceehhhHHHHHHHHHHH----HcCCCEEEEeecc-ccCCC-CCCcchHHHH
Q 029125          122 -VTAVISCVGGFGS------------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAA-DFGVA-NYLLQGYYEG  182 (198)
Q Consensus       122 -~d~vi~~ag~~~~------------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~-~~~~~-~~~~~~Y~~s  182 (198)
                       +|++|||||....            +...+++|+.++..+.+++.    +.+.++||++||. .+..+ .+....|++|
T Consensus       132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aS  211 (320)
T PLN02780        132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAAT  211 (320)
T ss_pred             CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHH
Confidence             5699999986421            12357899999988887763    4566799999994 33222 3556889999


Q ss_pred             HHHHHHHHHhh
Q 029125          183 KRAAETELLTR  193 (198)
Q Consensus       183 K~~~e~~l~~~  193 (198)
                      |++.+.+.+..
T Consensus       212 Kaal~~~~~~L  222 (320)
T PLN02780        212 KAYIDQFSRCL  222 (320)
T ss_pred             HHHHHHHHHHH
Confidence            99999877654

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.68  E-value=5.4e-16  Score=121.21  Aligned_cols=129  Identities=27%  Similarity=0.256  Sum_probs=99.5

Q ss_pred             EEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc-cccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCCCCcc
Q 029125           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-RDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSY  137 (198)
Q Consensus        59 vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~  137 (198)
                      |+|+||||.+|+.+++.|++.+++|.++.|+.+... +.....+++++.+|+.|++++.++|+++|+||++.+...    
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~----   76 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH----   76 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC----
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcch----
Confidence            799999999999999999999999999999874322 122235788999999999999999999999999887643    


Q ss_pred             ceehhhHHHHHHHHHHHHcCCCEEEEeecc-ccCC--CCCCcchHHHHHHHHHHHHHhh
Q 029125          138 MYKINGTANINAIRAASEKGVKRFVYISAA-DFGV--ANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       138 ~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~-~~~~--~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                        ........++++++++.|+++||+.|.. .+..  ...+..++...|...|+++++.
T Consensus        77 --~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~~~p~~~~~~~k~~ie~~l~~~  133 (233)
T PF05368_consen   77 --PSELEQQKNLIDAAKAAGVKHFVPSSFGADYDESSGSEPEIPHFDQKAEIEEYLRES  133 (233)
T ss_dssp             --CCHHHHHHHHHHHHHHHT-SEEEESEESSGTTTTTTSTTHHHHHHHHHHHHHHHHHC
T ss_pred             --hhhhhhhhhHHHhhhccccceEEEEEecccccccccccccchhhhhhhhhhhhhhhc
Confidence              3445666789999999999999975542 2211  2234456778899999999875

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.68  E-value=3.1e-16  Score=133.76  Aligned_cols=140  Identities=16%  Similarity=0.059  Sum_probs=105.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc-cc-cCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-RD-SWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~-~~-~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++++++||||+|+||.++++.|+++|++|++++|...... .. ...-+..++.+|++|.+++..+++       ++|+
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            45789999999999999999999999999999988532211 10 001234678999999988877654       5899


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHHHHcC----CCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAASEKG----VKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~~----~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      ||||+|...          .++..+++|+.+++++.+++....    .++||++||...-.+......|+.+|.+.+.++
T Consensus       288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~~~  367 (450)
T PRK08261        288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGLV  367 (450)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHHHHHHHH
Confidence            999999643          234567899999999999986633    368999998533234455678999999888777


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       368 ~~l  370 (450)
T PRK08261        368 QAL  370 (450)
T ss_pred             HHH
Confidence            654

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.68  E-value=5.9e-16  Score=124.02  Aligned_cols=135  Identities=19%  Similarity=0.120  Sum_probs=99.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc------CCCE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD------GVTA  124 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~------~~d~  124 (198)
                      +|+++|||+ |+||.+++++|. +|++|++++|+..+...     .....++.++.+|++|.+++.++++      ++|+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~   79 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG   79 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence            467899998 799999999996 89999999997543111     1112357889999999998887764      5899


Q ss_pred             EEEccccCC---CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCC--------------------------
Q 029125          125 VISCVGGFG---SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVAN--------------------------  173 (198)
Q Consensus       125 vi~~ag~~~---~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~--------------------------  173 (198)
                      ||||||...   .+...+++|+.+++++++++...  ..++++++||.......                          
T Consensus        80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (275)
T PRK06940         80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQP  159 (275)
T ss_pred             EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccccccccc
Confidence            999999643   45677899999999999888543  12457778874321111                          


Q ss_pred             ----CCcchHHHHHHHHHHHHHh
Q 029125          174 ----YLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       174 ----~~~~~Y~~sK~~~e~~l~~  192 (198)
                          .....|+.||++.+.+.+.
T Consensus       160 ~~~~~~~~~Y~asKaa~~~~~~~  182 (275)
T PRK06940        160 DAIEDSLHAYQIAKRANALRVMA  182 (275)
T ss_pred             cccCCccchhHHHHHHHHHHHHH
Confidence                1356899999998887764

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.68  E-value=6.5e-16  Score=122.80  Aligned_cols=139  Identities=12%  Similarity=-0.039  Sum_probs=101.9

Q ss_pred             CCCeEEEEcCCc--hhHHHHHHHHHHCCCeEEEeecCCCCc--cccc--CCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           55 PSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRSS--LRDS--WANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        55 ~~~~vlvtGatG--~iG~~l~~~l~~~g~~V~~l~r~~~~~--~~~~--~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ++|+++||||++  +||.+++++|+++|++|++.+|+....  ....  ......++.+|++|++++.++++       +
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS   86 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            568999999997  899999999999999999988763211  1110  11223467899999998887764       4


Q ss_pred             CCEEEEccccCC--------------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          122 VTAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       122 ~d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                      +|++|||+|...              .|...+++|+.+.+.+++++...  ..++||++||.....+.+....|+.+|++
T Consensus        87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa  166 (260)
T PRK06603         87 FDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMGVAKAA  166 (260)
T ss_pred             ccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCcccchhhHHHH
Confidence            899999998532              12345789999999888876432  22589999995433344556789999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+.+..
T Consensus       167 l~~l~~~l  174 (260)
T PRK06603        167 LEASVKYL  174 (260)
T ss_pred             HHHHHHHH
Confidence            99887754

>PRK05599 hypothetical protein; Provisional

Probab=99.67  E-value=1e-15  Score=120.70  Aligned_cols=136  Identities=15%  Similarity=0.108  Sum_probs=98.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      |+++||||+++||.+++++|+ +|++|++++|+.++...      ......+.++.+|+.|++++.++++       ++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999999 59999999997643211      1111247889999999988876653       589


Q ss_pred             EEEEccccCCCC----------ccceehhhHHHHHHHHHH----HHcC-CCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          124 AVISCVGGFGSN----------SYMYKINGTANINAIRAA----SEKG-VKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       124 ~vi~~ag~~~~~----------~~~~~~n~~~~~~~~~a~----~~~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      ++|||+|.....          .....+|+.+...+++.+    .+.+ .++||++||.....+.+....|+.+|++.+.
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~  159 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDA  159 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHHH
Confidence            999999964321          123456777776555443    3333 4689999995444445566789999999988


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +.+..
T Consensus       160 ~~~~l  164 (246)
T PRK05599        160 FCQGL  164 (246)
T ss_pred             HHHHH
Confidence            77654

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.67  E-value=1.5e-15  Score=118.60  Aligned_cols=134  Identities=22%  Similarity=0.236  Sum_probs=97.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHh---cCCCEEEEcccc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL---DGVTAVISCVGG  131 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~---~~~d~vi~~ag~  131 (198)
                      |+|+||||+|+||++++++|+++|  +.|....|+....   ....++.++++|++|.+++.++.   .++|+||||+|.
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~   77 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGM   77 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCcc
Confidence            589999999999999999999985  5666666654332   12357889999999998877654   478999999996


Q ss_pred             CCC----------------CccceehhhHHHHHHHHHHHH----cCCCEEEEeecccc---CCCCCCcchHHHHHHHHHH
Q 029125          132 FGS----------------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADF---GVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       132 ~~~----------------~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~---~~~~~~~~~Y~~sK~~~e~  188 (198)
                      ...                +...+.+|+.+...+++.+..    .+.++++++||...   ..+.++...|+.+|++.+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~~~  157 (235)
T PRK09009         78 LHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRASKAALNM  157 (235)
T ss_pred             ccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhhhhHHHHHH
Confidence            421                123467888888877777643    33468999987321   1223345689999999999


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       158 ~~~~l  162 (235)
T PRK09009        158 FLKTL  162 (235)
T ss_pred             HHHHH
Confidence            87754

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.67  E-value=1.3e-15  Score=121.22  Aligned_cols=140  Identities=14%  Similarity=0.072  Sum_probs=100.2

Q ss_pred             CCCCeEEEEcC--CchhHHHHHHHHHHCCCeEEEeecCCCCc--cccc--CCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGG--NGFVGSHICREALDRGLTVASLSRSGRSS--LRDS--WANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGa--tG~iG~~l~~~l~~~g~~V~~l~r~~~~~--~~~~--~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++++++||||  +++||++++++|+++|++|++..|.....  ....  .......+.+|++|++++.++++       
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD   83 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence            35689999997  67999999999999999999987653211  1010  11234678999999999887764       


Q ss_pred             CCCEEEEccccCCC---------------CccceehhhHHHHHHHHHHHH---cCCCEEEEeeccccCCCCCCcchHHHH
Q 029125          121 GVTAVISCVGGFGS---------------NSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEG  182 (198)
Q Consensus       121 ~~d~vi~~ag~~~~---------------~~~~~~~n~~~~~~~~~a~~~---~~~~~~v~~Ss~~~~~~~~~~~~Y~~s  182 (198)
                      ++|++|||||....               ++..+++|+.+.+.+.+++..   ...++||++||...-.+.+....|+.+
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~~~~Y~as  163 (261)
T PRK08690         84 GLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMGMA  163 (261)
T ss_pred             CCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCCcccchhH
Confidence            58999999986421               122357788888777776533   123589999985433344566789999


Q ss_pred             HHHHHHHHHhh
Q 029125          183 KRAAETELLTR  193 (198)
Q Consensus       183 K~~~e~~l~~~  193 (198)
                      |++.+.+.+..
T Consensus       164 Kaal~~l~~~l  174 (261)
T PRK08690        164 KASLEAGIRFT  174 (261)
T ss_pred             HHHHHHHHHHH
Confidence            99999887653

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.67  E-value=1.1e-15  Score=124.75  Aligned_cols=113  Identities=12%  Similarity=0.058  Sum_probs=85.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ++++++||||+++||.+++++|+++| ++|++++|+..+..+     ......+.++.+|++|.+++.++++       +
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            36789999999999999999999999 999999987543111     0112357888999999988776653       5


Q ss_pred             CCEEEEccccCCC-----------CccceehhhHHHHHHHHHHH----HcC--CCEEEEeecc
Q 029125          122 VTAVISCVGGFGS-----------NSYMYKINGTANINAIRAAS----EKG--VKRFVYISAA  167 (198)
Q Consensus       122 ~d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~----~~~--~~~~v~~Ss~  167 (198)
                      +|++|||||....           ++..+++|+.+++.+++++.    +.+  .++||++||.
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~  144 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSI  144 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecC
Confidence            8999999996321           23457899999987776653    332  3699999994

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.67  E-value=8.8e-16  Score=122.05  Aligned_cols=139  Identities=12%  Similarity=0.048  Sum_probs=101.8

Q ss_pred             CCCeEEEEcC--CchhHHHHHHHHHHCCCeEEEeecCCCC--cccc--cCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           55 PSEKLLVLGG--NGFVGSHICREALDRGLTVASLSRSGRS--SLRD--SWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        55 ~~~~vlvtGa--tG~iG~~l~~~l~~~g~~V~~l~r~~~~--~~~~--~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ++++++||||  +++||.+++++|+++|++|++.+|....  ....  .......++.+|++|++++.++++       +
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG   84 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence            4689999996  6799999999999999999988654211  1110  011233578899999998887764       5


Q ss_pred             CCEEEEccccCCC---------------CccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHH
Q 029125          122 VTAVISCVGGFGS---------------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKR  184 (198)
Q Consensus       122 ~d~vi~~ag~~~~---------------~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~  184 (198)
                      +|++|||||....               |+..+++|+.+.+.+.+++...  ..++||++||.....+.+....|+.+|+
T Consensus        85 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~~~~Y~asKa  164 (260)
T PRK06997         85 LDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTMGLAKA  164 (260)
T ss_pred             CcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCCcchHHHHHH
Confidence            8999999985321               1235789999999888887542  2358999998543344455678999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.+.+.+..
T Consensus       165 al~~l~~~l  173 (260)
T PRK06997        165 SLEASVRYL  173 (260)
T ss_pred             HHHHHHHHH
Confidence            999887754

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.7e-15  Score=123.21  Aligned_cols=140  Identities=17%  Similarity=0.107  Sum_probs=101.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC---------ccc------ccCCCCeEEEEccCCCHHHHHHH
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS---------SLR------DSWANNVIWHQGNLLSSDSWKEA  118 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~---------~~~------~~~~~~~~~~~~D~~d~~~~~~~  118 (198)
                      .++|+++||||+++||.+++++|+++|++|++++|+..+         ...      ......+.++.+|++|++++..+
T Consensus         6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   85 (305)
T PRK08303          6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL   85 (305)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            357899999999999999999999999999999987421         000      01123577899999999888876


Q ss_pred             hc-------CCCEEEEcc-ccC------C--------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeecccc--C
Q 029125          119 LD-------GVTAVISCV-GGF------G--------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADF--G  170 (198)
Q Consensus       119 ~~-------~~d~vi~~a-g~~------~--------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~--~  170 (198)
                      ++       ++|++|||+ |..      .        .+...+++|+.+++.+++++..    .+..+||++||...  .
T Consensus        86 ~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~  165 (305)
T PRK08303         86 VERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYN  165 (305)
T ss_pred             HHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccccc
Confidence            54       589999999 631      1        1123467888888877777643    33468999998432  2


Q ss_pred             C-CCCCcchHHHHHHHHHHHHHhh
Q 029125          171 V-ANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       171 ~-~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      . +......|+.+|++...+.+..
T Consensus       166 ~~~~~~~~~Y~asKaal~~lt~~L  189 (305)
T PRK08303        166 ATHYRLSVFYDLAKTSVNRLAFSL  189 (305)
T ss_pred             CcCCCCcchhHHHHHHHHHHHHHH
Confidence            1 2223567999999999887643

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.66  E-value=1.9e-15  Score=118.36  Aligned_cols=141  Identities=21%  Similarity=0.232  Sum_probs=117.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccC----CCCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSW----ANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~----~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      -.+..+-|.|||||+|++++.+|.+.|-+|++--|..+.......    ...+.++..|+.|+++++++++..++|||..
T Consensus        59 ~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLI  138 (391)
T KOG2865|consen   59 VSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLI  138 (391)
T ss_pred             ccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEee
Confidence            345678899999999999999999999999999987544222211    2468899999999999999999999999999


Q ss_pred             ccC--CCCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhhCCC
Q 029125          130 GGF--GSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPY  196 (198)
Q Consensus       130 g~~--~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~~~~  196 (198)
                      |--  ..+-.+.++|+.+...+++.|++.|+.+||++|+..  ..-...+-|-.+|+++|..+++++|.
T Consensus       139 Grd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lg--anv~s~Sr~LrsK~~gE~aVrdafPe  205 (391)
T KOG2865|consen  139 GRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLG--ANVKSPSRMLRSKAAGEEAVRDAFPE  205 (391)
T ss_pred             ccccccCCcccccccchHHHHHHHHHHhhChhheeehhhcc--ccccChHHHHHhhhhhHHHHHhhCCc
Confidence            841  223356789999999999999999999999999863  33455577999999999999999874

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.66  E-value=1.4e-15  Score=120.55  Aligned_cols=138  Identities=14%  Similarity=0.057  Sum_probs=101.5

Q ss_pred             CCCeEEEEcC--CchhHHHHHHHHHHCCCeEEEeecCCCCc-cc---ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           55 PSEKLLVLGG--NGFVGSHICREALDRGLTVASLSRSGRSS-LR---DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        55 ~~~~vlvtGa--tG~iG~~l~~~l~~~g~~V~~l~r~~~~~-~~---~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ++++++||||  +++||.+++++|+++|++|++++|+.... .+   ......+.++.+|++|+++++++++       +
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999  89999999999999999999998764221 11   1122357789999999998887654       5


Q ss_pred             CCEEEEccccCCC--------------CccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          122 VTAVISCVGGFGS--------------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       122 ~d~vi~~ag~~~~--------------~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                      +|++|||||....              +...+++|+.+++.+.+++...  ..++|+++|+.. ..+.+....|+.||++
T Consensus        86 iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~-~~~~~~~~~Y~asKaa  164 (256)
T PRK07889         86 LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDA-TVAWPAYDWMGVAKAA  164 (256)
T ss_pred             CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecc-cccCCccchhHHHHHH
Confidence            8999999986421              1234789999998888877542  225899988642 2223445678999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+.+..
T Consensus       165 l~~l~~~l  172 (256)
T PRK07889        165 LESTNRYL  172 (256)
T ss_pred             HHHHHHHH
Confidence            99887754

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.66  E-value=1.5e-15  Score=118.64  Aligned_cols=139  Identities=19%  Similarity=0.189  Sum_probs=103.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--c--cCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D--SWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~--~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      ++++|+||||+|+||.++++.|+++|++|++++|++.+...  .  ....++.++.+|++|++++.++++       ++|
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   83 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID   83 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            46799999999999999999999999999999997643211  0  011367889999999988876654       469


Q ss_pred             EEEEccccCCC--------CccceehhhHHHHHHHHHHHHc--CCCEEEEeeccc-cCCCCCCcchHHHHHHHHHHHHHh
Q 029125          124 AVISCVGGFGS--------NSYMYKINGTANINAIRAASEK--GVKRFVYISAAD-FGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       124 ~vi~~ag~~~~--------~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~-~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      .+||++|....        ++..+++|+.+...+++.+...  ..++||++||.. ...+.++...|+.+|.+.+.+++.
T Consensus        84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~~~~~~~  163 (238)
T PRK05786         84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEI  163 (238)
T ss_pred             EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCCCchHHHHHHHHHHHHHHH
Confidence            99999985431        1334678888888777777542  235799999843 223445567899999999877665


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       164 ~  164 (238)
T PRK05786        164 L  164 (238)
T ss_pred             H
Confidence            4

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.65  E-value=2.2e-15  Score=118.44  Aligned_cols=138  Identities=14%  Similarity=0.144  Sum_probs=101.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      ++++++||||+|+||..+++.|+++|++|++++|+..+...     .....++.++.+|+.|.+++.++++       ++
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            46799999999999999999999999999999987543111     1113467889999999888776554       47


Q ss_pred             CEEEEccccCCC-------------------CccceehhhHHHHHHHHHHH----Hc-CCCEEEEeeccccCCCCCCcch
Q 029125          123 TAVISCVGGFGS-------------------NSYMYKINGTANINAIRAAS----EK-GVKRFVYISAADFGVANYLLQG  178 (198)
Q Consensus       123 d~vi~~ag~~~~-------------------~~~~~~~n~~~~~~~~~a~~----~~-~~~~~v~~Ss~~~~~~~~~~~~  178 (198)
                      |+|||++|....                   +...+++|+.++..+.+.+.    +. ...+|+++||... .+.++...
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~-~~~~~~~~  162 (253)
T PRK08217         84 NGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIAR-AGNMGQTN  162 (253)
T ss_pred             CEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccc-cCCCCCch
Confidence            999999985321                   12345788988887666543    22 2347888888432 23345678


Q ss_pred             HHHHHHHHHHHHHhh
Q 029125          179 YYEGKRAAETELLTR  193 (198)
Q Consensus       179 Y~~sK~~~e~~l~~~  193 (198)
                      |+.+|.+.+.+++..
T Consensus       163 Y~~sK~a~~~l~~~l  177 (253)
T PRK08217        163 YSASKAGVAAMTVTW  177 (253)
T ss_pred             hHHHHHHHHHHHHHH
Confidence            999999999987765

>PRK12320 hypothetical protein; Provisional

Probab=99.65  E-value=1.8e-15  Score=133.68  Aligned_cols=103  Identities=22%  Similarity=0.243  Sum_probs=86.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCCCCc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS  136 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~  136 (198)
                      |+|+||||+||||++++++|+++|++|++++|.....    ...+++++.+|++|+. +.++++++|+|||+++....  
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~----~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~--   73 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA----LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVDTS--   73 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc----ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccCcc--
Confidence            4799999999999999999999999999999864431    1346889999999985 78888899999999986421  


Q ss_pred             cceehhhHHHHHHHHHHHHcCCCEEEEeecc
Q 029125          137 YMYKINGTANINAIRAASEKGVKRFVYISAA  167 (198)
Q Consensus       137 ~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~  167 (198)
                      ....+|+.++.+++++|++.++ ++||+||.
T Consensus        74 ~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~  103 (699)
T PRK12320         74 APGGVGITGLAHVANAAARAGA-RLLFVSQA  103 (699)
T ss_pred             chhhHHHHHHHHHHHHHHHcCC-eEEEEECC
Confidence            2235899999999999999987 79999975

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.65  E-value=8.2e-16  Score=121.77  Aligned_cols=136  Identities=18%  Similarity=0.130  Sum_probs=100.7

Q ss_pred             eEEEEcCCchhHHHHHHHHHH----CCCeEEEeecCCCCccc-----cc--CCCCeEEEEccCCCHHHHHHHhcC-----
Q 029125           58 KLLVLGGNGFVGSHICREALD----RGLTVASLSRSGRSSLR-----DS--WANNVIWHQGNLLSSDSWKEALDG-----  121 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~----~g~~V~~l~r~~~~~~~-----~~--~~~~~~~~~~D~~d~~~~~~~~~~-----  121 (198)
                      .++||||+++||.+++++|++    +|++|++++|+......     ..  ...++.++.+|++|.+++.++++.     
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            589999999999999999997    79999999997543111     00  123578899999999988876642     


Q ss_pred             ------CCEEEEccccCCC-------------CccceehhhHHHHHHHHHHHH----c-C-CCEEEEeeccccCCCCCCc
Q 029125          122 ------VTAVISCVGGFGS-------------NSYMYKINGTANINAIRAASE----K-G-VKRFVYISAADFGVANYLL  176 (198)
Q Consensus       122 ------~d~vi~~ag~~~~-------------~~~~~~~n~~~~~~~~~a~~~----~-~-~~~~v~~Ss~~~~~~~~~~  176 (198)
                            .|+||||||....             +...+++|+.+++.+.+.+..    . + .++||++||...-.+.+..
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~  161 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW  161 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence                  2599999985321             123578999999877776633    2 2 3589999995433445566


Q ss_pred             chHHHHHHHHHHHHHhh
Q 029125          177 QGYYEGKRAAETELLTR  193 (198)
Q Consensus       177 ~~Y~~sK~~~e~~l~~~  193 (198)
                      ..|+.+|.+.+.+++..
T Consensus       162 ~~Y~asKaal~~l~~~l  178 (256)
T TIGR01500       162 ALYCAGKAARDMLFQVL  178 (256)
T ss_pred             hHHHHHHHHHHHHHHHH
Confidence            78999999999888764

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.64  E-value=4.6e-15  Score=119.21  Aligned_cols=99  Identities=29%  Similarity=0.379  Sum_probs=83.0

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHh------cC-CCEEEEccc
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL------DG-VTAVISCVG  130 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~------~~-~d~vi~~ag  130 (198)
                      +|+||||||++|++++++|+++|++|++++|++.+..    ..+++.+.+|+.|++.+.+++      ++ +|.|||+++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~   76 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP   76 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence            4899999999999999999999999999999876532    246778889999999999998      57 999999987


Q ss_pred             cCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeecc
Q 029125          131 GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (198)
Q Consensus       131 ~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~  167 (198)
                      ....       ......+++++|++.|++|||++||.
T Consensus        77 ~~~~-------~~~~~~~~i~aa~~~gv~~~V~~Ss~  106 (285)
T TIGR03649        77 PIPD-------LAPPMIKFIDFARSKGVRRFVLLSAS  106 (285)
T ss_pred             CCCC-------hhHHHHHHHHHHHHcCCCEEEEeecc
Confidence            4321       12345688999999999999999984

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.64  E-value=5.4e-15  Score=115.39  Aligned_cols=136  Identities=12%  Similarity=0.038  Sum_probs=98.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHh-------c-C
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEAL-------D-G  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~-------~-~  121 (198)
                      ++++++||||+++||.+++++|+++|++|++++|+.++...     .....++..+.+|+.|++++.+++       . .
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA   83 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            56899999999999999999999999999999997653111     111345778889999998887665       3 5


Q ss_pred             CCEEEEccccCC---C--------CccceehhhHHHHHHHHHH----HHcC-CCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          122 VTAVISCVGGFG---S--------NSYMYKINGTANINAIRAA----SEKG-VKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       122 ~d~vi~~ag~~~---~--------~~~~~~~n~~~~~~~~~a~----~~~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                      +|++|||+|...   .        +...+.+|+.+.+.+++.+    .+.+ .++||++||.. +  .+....|+.+|++
T Consensus        84 iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~-~--~~~~~~Y~asKaa  160 (227)
T PRK08862         84 PDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHD-D--HQDLTGVESSNAL  160 (227)
T ss_pred             CCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCC-C--CCCcchhHHHHHH
Confidence            899999997421   1        1224556777776665554    3333 46899999842 1  2345689999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+.+..
T Consensus       161 l~~~~~~l  168 (227)
T PRK08862        161 VSGFTHSW  168 (227)
T ss_pred             HHHHHHHH
Confidence            99887653

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.63  E-value=8.9e-15  Score=118.76  Aligned_cols=141  Identities=17%  Similarity=0.059  Sum_probs=104.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-------ccCCCCeEEEEccCCCHHHHHHHhc-----
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-------~~~~~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      ...+++++||||+++||.+++++|+.+|.+|++..|+.....+       ......+.++++|++|.+++..+.+     
T Consensus        32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~  111 (314)
T KOG1208|consen   32 DLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK  111 (314)
T ss_pred             cCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence            3456899999999999999999999999999999998643111       1224568889999999998887654     


Q ss_pred             --CCCEEEEccccCCC--------CccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCC-------------C
Q 029125          121 --GVTAVISCVGGFGS--------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVA-------------N  173 (198)
Q Consensus       121 --~~d~vi~~ag~~~~--------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~-------------~  173 (198)
                        ..|++|+|||.+..        .+..+.+|+.|++.+.+.+    +.....|||++||..++..             .
T Consensus       112 ~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~~  191 (314)
T KOG1208|consen  112 EGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKLY  191 (314)
T ss_pred             CCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccCc
Confidence              47999999997542        2556889999998666655    4444479999999543110             1


Q ss_pred             CCcchHHHHHHHHHHHHHhh
Q 029125          174 YLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       174 ~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      .....|+.||.+...+..+.
T Consensus       192 ~~~~~Y~~SKla~~l~~~eL  211 (314)
T KOG1208|consen  192 SSDAAYALSKLANVLLANEL  211 (314)
T ss_pred             cchhHHHHhHHHHHHHHHHH
Confidence            11124999999887665544

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.63  E-value=9.9e-15  Score=116.53  Aligned_cols=142  Identities=15%  Similarity=0.041  Sum_probs=105.9

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--c------cCCCCeEEEEccCCCHHHHHHHh----
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D------SWANNVIWHQGNLLSSDSWKEAL----  119 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~------~~~~~~~~~~~D~~d~~~~~~~~----  119 (198)
                      ....+|+++|||++.+||++++.+|++.|++|++.+|+.+....  .      ....++..+.+|+++.+++.+++    
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999998654111  0      01345889999999887766554    


Q ss_pred             ----cCCCEEEEccccCC-----------CCccceehhhHH-HHHHHHHHH----HcCCCEEEEeeccccCCCCCCc-ch
Q 029125          120 ----DGVTAVISCVGGFG-----------SNSYMYKINGTA-NINAIRAAS----EKGVKRFVYISAADFGVANYLL-QG  178 (198)
Q Consensus       120 ----~~~d~vi~~ag~~~-----------~~~~~~~~n~~~-~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~-~~  178 (198)
                          .++|++|||||...           .|+..+.+|+.| .+.+.+++.    +.+...|+++||..+..+..+. ..
T Consensus        84 ~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~  163 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVA  163 (270)
T ss_pred             HHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCccc
Confidence                35899999999532           245678999996 555555553    3345688888885444443333 79


Q ss_pred             HHHHHHHHHHHHHhh
Q 029125          179 YYEGKRAAETELLTR  193 (198)
Q Consensus       179 Y~~sK~~~e~~l~~~  193 (198)
                      |+.+|.+.+.+.+..
T Consensus       164 Y~~sK~al~~ltr~l  178 (270)
T KOG0725|consen  164 YGVSKAALLQLTRSL  178 (270)
T ss_pred             chhHHHHHHHHHHHH
Confidence            999999999988754

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.62  E-value=2.9e-15  Score=117.10  Aligned_cols=140  Identities=19%  Similarity=0.225  Sum_probs=110.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHC--CCeEEEeec-----CCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDR--GLTVASLSR-----SGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVI  126 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~--g~~V~~l~r-----~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi  126 (198)
                      .++++||||.||||++.+..+...  .++.++++-     +........+.++..++.+|+.|...+.-++.  ++|.||
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vi   85 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVI   85 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhh
Confidence            389999999999999999999986  466766653     11111122345788999999999988888775  689999


Q ss_pred             EccccCC------CCccceehhhHHHHHHHHHHHHc-CCCEEEEeec-cccCC-----------CCCCcchHHHHHHHHH
Q 029125          127 SCVGGFG------SNSYMYKINGTANINAIRAASEK-GVKRFVYISA-ADFGV-----------ANYLLQGYYEGKRAAE  187 (198)
Q Consensus       127 ~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~-~~~~~v~~Ss-~~~~~-----------~~~~~~~Y~~sK~~~e  187 (198)
                      |+|+...      +.-.....|+.++..+++++... ++++|+++|| .+||.           .+.|.++|+++|+++|
T Consensus        86 hfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE  165 (331)
T KOG0747|consen   86 HFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAE  165 (331)
T ss_pred             hhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHH
Confidence            9998532      34456678999999999999887 5889999999 77875           2456789999999999


Q ss_pred             HHHHhhCC
Q 029125          188 TELLTRYP  195 (198)
Q Consensus       188 ~~l~~~~~  195 (198)
                      .+++++-.
T Consensus       166 ~~v~Sy~~  173 (331)
T KOG0747|consen  166 MLVRSYGR  173 (331)
T ss_pred             HHHHHHhh
Confidence            99998843

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.61  E-value=3.5e-15  Score=110.94  Aligned_cols=133  Identities=15%  Similarity=0.139  Sum_probs=105.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCC--CCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWA--NNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~--~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      .+.+..+||||+++||++++..|++.|++|.+.+++......  ...+  .+...+.||+.++++++..++       .+
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p   91 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP   91 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence            356789999999999999999999999999999987543211  1122  367889999999988887665       47


Q ss_pred             CEEEEccccCC----------CCccceehhhHHHHHHHHHHHHc------CCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK------GVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~------~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      +++++|||...          +|+..+.+|+.|.+.+.+++.+.      +..+||++||.+....+.....|+++|..+
T Consensus        92 svlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~Gv  171 (256)
T KOG1200|consen   92 SVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGGV  171 (256)
T ss_pred             cEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCce
Confidence            99999999753          57888899999999888887543      233899999987777777888899887543

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.61  E-value=6.9e-15  Score=110.18  Aligned_cols=136  Identities=16%  Similarity=0.119  Sum_probs=103.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHHHHHHHhc-------CCCEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v  125 (198)
                      .++.+||||||+++||..++++|.+.|-+|++..|+.....+ ....+.+..+.||+.|.+..+++++       ..+++
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl   82 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL   82 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence            356799999999999999999999999999999998655222 2224567888899999887777654       46999


Q ss_pred             EEccccCCCC------------ccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          126 ISCVGGFGSN------------SYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       126 i~~ag~~~~~------------~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      |||||.....            .....+|..++..+..+...    ..-.-||.+||.-.-.|......|+++|++.-.+
T Consensus        83 iNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAaiHsy  162 (245)
T COG3967          83 INNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSY  162 (245)
T ss_pred             eecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHHHHH
Confidence            9999965311            23457899999888777643    3345799999943334555566799999987654

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.61  E-value=1.5e-14  Score=113.29  Aligned_cols=138  Identities=19%  Similarity=0.197  Sum_probs=110.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc---------ccccCCCCeEEEEccCCCHHHHHHHhc--CCCE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS---------LRDSWANNVIWHQGNLLSSDSWKEALD--GVTA  124 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~---------~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~  124 (198)
                      +|+.||||-||.-|.+|++.|++.|++|..+.|+....         .......++.++.+|++|...+..+++  .+|-
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE   81 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE   81 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence            67899999999999999999999999999999974321         111223458899999999999999987  5799


Q ss_pred             EEEccccC------CCCccceehhhHHHHHHHHHHHHcCC--CEEEEeecc-ccCC----------CCCCcchHHHHHHH
Q 029125          125 VISCVGGF------GSNSYMYKINGTANINAIRAASEKGV--KRFVYISAA-DFGV----------ANYLLQGYYEGKRA  185 (198)
Q Consensus       125 vi~~ag~~------~~~~~~~~~n~~~~~~~~~a~~~~~~--~~~v~~Ss~-~~~~----------~~~~~~~Y~~sK~~  185 (198)
                      |+|.++.+      ..+....+++..|+++++++.+..+.  -||...||+ .||.          |-.|.+||+.+|..
T Consensus        82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlY  161 (345)
T COG1089          82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLY  161 (345)
T ss_pred             heeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHH
Confidence            99999843      35566778999999999999988764  388888884 3653          44678999999998


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      +--+..++
T Consensus       162 a~W~tvNY  169 (345)
T COG1089         162 AYWITVNY  169 (345)
T ss_pred             HHheeeeh
Confidence            87655554

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.60  E-value=1.8e-14  Score=113.39  Aligned_cols=138  Identities=18%  Similarity=0.121  Sum_probs=102.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc----ccccCC----CCeEEEEccCCC-HHHHHHHhc----
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS----LRDSWA----NNVIWHQGNLLS-SDSWKEALD----  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~----~~~~~~----~~~~~~~~D~~d-~~~~~~~~~----  120 (198)
                      ..+++|+||||+++||.++++.|+++|++|+++.|+....    ......    ..+.+..+|+++ .+++..+++    
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~   82 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE   82 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999998888875431    111112    357788899998 877776654    


Q ss_pred             ---CCCEEEEccccCC-----------CCccceehhhHHHHHHHHHHHHcCCC--EEEEeeccccCCCCCC-cchHHHHH
Q 029125          121 ---GVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAASEKGVK--RFVYISAADFGVANYL-LQGYYEGK  183 (198)
Q Consensus       121 ---~~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~~~~~~--~~v~~Ss~~~~~~~~~-~~~Y~~sK  183 (198)
                         ++|++|||||...           .++..+.+|+.+...+.+++.. ..+  +||++||.... +..+ ...|+.||
T Consensus        83 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~-~~~~~~Iv~isS~~~~-~~~~~~~~Y~~sK  160 (251)
T COG1028          83 EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALP-LMKKQRIVNISSVAGL-GGPPGQAAYAASK  160 (251)
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHH-hhhhCeEEEECCchhc-CCCCCcchHHHHH
Confidence               4899999999642           2245678999999888874432 122  89999996544 5555 48999999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      ++.+.+.+..
T Consensus       161 ~al~~~~~~l  170 (251)
T COG1028         161 AALIGLTKAL  170 (251)
T ss_pred             HHHHHHHHHH
Confidence            9998876643

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.60  E-value=1.6e-14  Score=114.72  Aligned_cols=139  Identities=20%  Similarity=0.160  Sum_probs=109.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc--ccccC-CCCeEEEEccCCCHHHHHHHhc---------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS--LRDSW-ANNVIWHQGNLLSSDSWKEALD---------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~--~~~~~-~~~~~~~~~D~~d~~~~~~~~~---------  120 (198)
                      ....|.|+|||+-++.|..++++|.++|+.|++-.-.++..  ..... .++...++.|++++++++++.+         
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~  105 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED  105 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence            34568899999999999999999999999999888554431  11222 5678888999999999998765         


Q ss_pred             CCCEEEEccccCC-----------CCccceehhhHHHHHHHHHHH---HcCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 GVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAAS---EKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 ~~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~---~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      +.-.||||||...           ++....++|..|+..+.++..   +...+|+|++||.....+.+...+|+.||.++
T Consensus       106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p~~g~Y~~SK~aV  185 (322)
T KOG1610|consen  106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALPALGPYCVSKFAV  185 (322)
T ss_pred             cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCcccccchhhHHHH
Confidence            4579999999542           234567999999998777763   23356999999976666777889999999999


Q ss_pred             HHHHH
Q 029125          187 ETELL  191 (198)
Q Consensus       187 e~~l~  191 (198)
                      |.+..
T Consensus       186 eaf~D  190 (322)
T KOG1610|consen  186 EAFSD  190 (322)
T ss_pred             HHHHH
Confidence            98654

>PLN00015 protochlorophyllide reductase

Probab=99.59  E-value=1.3e-14  Score=118.09  Aligned_cols=108  Identities=14%  Similarity=0.122  Sum_probs=82.2

Q ss_pred             EEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCccc---c--cCCCCeEEEEccCCCHHHHHHHhc-------CCCEEE
Q 029125           60 LVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (198)
Q Consensus        60 lvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~---~--~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi  126 (198)
                      +||||+++||.+++++|+++| ++|++.+|+..+...   .  .....+.++.+|++|.+++.++++       ++|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            599999999999999999999 999999987543111   0  112357888999999998877654       589999


Q ss_pred             EccccCC-----------CCccceehhhHHHHHHHHHHH----HcC--CCEEEEeecc
Q 029125          127 SCVGGFG-----------SNSYMYKINGTANINAIRAAS----EKG--VKRFVYISAA  167 (198)
Q Consensus       127 ~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~----~~~--~~~~v~~Ss~  167 (198)
                      ||||...           .++..+++|+.+++.+++.+.    +.+  .++||++||.
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~  138 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSI  138 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEecc
Confidence            9999632           113467899999987776653    333  4699999994

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.59  E-value=9.1e-15  Score=110.20  Aligned_cols=138  Identities=15%  Similarity=0.072  Sum_probs=105.5

Q ss_pred             CCCCeEEEEcCC-chhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--------CCCE
Q 029125           54 PPSEKLLVLGGN-GFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGat-G~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--------~~d~  124 (198)
                      ...++|+|||++ |+||-+|+++|.++|+.|++..|+.++-.+.....++.....|+++++++.....        .+|.
T Consensus         5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~   84 (289)
T KOG1209|consen    5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL   84 (289)
T ss_pred             cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence            356789999874 9999999999999999999999987663332234578999999999998887653        3799


Q ss_pred             EEEccccCCC----------CccceehhhHHHHHHHHHHHHc---CCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 029125          125 VISCVGGFGS----------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       125 vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~~---~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      +|||||..-.          -+..+++|+.|.++..++....   ..+.||++.|...-.+-+..+.|.+||++.-.+.+
T Consensus        85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAihay~~  164 (289)
T KOG1209|consen   85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAIHAYAR  164 (289)
T ss_pred             EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhhhHHHHHHHHhhh
Confidence            9999995321          1456899999998777776421   23489999995433445556789999999877654

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.59  E-value=4.2e-15  Score=112.98  Aligned_cols=139  Identities=19%  Similarity=0.213  Sum_probs=106.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC-c----ccccC-CCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS-S----LRDSW-ANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~-~----~~~~~-~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++|++++||+.|+||..+.++|+.+|.++.+++.+.+. +    .+... ...+.++++|+++..+++++|+       
T Consensus         3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg   82 (261)
T KOG4169|consen    3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG   82 (261)
T ss_pred             ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence            458999999999999999999999999877777655443 1    11112 3468999999999998888876       


Q ss_pred             CCCEEEEccccCC--CCccceehhhHHHHHHHHHH----HH-cC--CCEEEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 029125          121 GVTAVISCVGGFG--SNSYMYKINGTANINAIRAA----SE-KG--VKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       121 ~~d~vi~~ag~~~--~~~~~~~~n~~~~~~~~~a~----~~-~~--~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      .+|++||+||...  +|+....+|+.|..+-...+    .+ .|  .+-||++||...-.|-+....|++||+.+-.+.|
T Consensus        83 ~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTR  162 (261)
T KOG4169|consen   83 TIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTR  162 (261)
T ss_pred             ceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeeeh
Confidence            4799999999865  57888899988876544444    33 22  3368999997656677777899999998877666


Q ss_pred             h
Q 029125          192 T  192 (198)
Q Consensus       192 ~  192 (198)
                      +
T Consensus       163 S  163 (261)
T KOG4169|consen  163 S  163 (261)
T ss_pred             h
Confidence            5

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.59  E-value=1.4e-14  Score=116.24  Aligned_cols=127  Identities=22%  Similarity=0.162  Sum_probs=86.3

Q ss_pred             EEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCCC---C
Q 029125           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS---N  135 (198)
Q Consensus        59 vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~---~  135 (198)
                      |+||||+||||+++++.|+++|++|++++|++...... ...  .  ..|+.+ +.+...++++|+|||+|+....   +
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~--~--~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~   74 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANT-KWE--G--YKPWAP-LAESEALEGADAVINLAGEPIADKRW   74 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcc-cce--e--eecccc-cchhhhcCCCCEEEECCCCCcccccC
Confidence            68999999999999999999999999999986553211 111  1  112222 4455677899999999985321   2


Q ss_pred             -----ccceehhhHHHHHHHHHHHHcCCC--EEEEeecc-ccCCC----------CCCcchHHHHHHHHHHHHH
Q 029125          136 -----SYMYKINGTANINAIRAASEKGVK--RFVYISAA-DFGVA----------NYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       136 -----~~~~~~n~~~~~~~~~a~~~~~~~--~~v~~Ss~-~~~~~----------~~~~~~Y~~sK~~~e~~l~  191 (198)
                           ...+++|+.++.++++++++.+++  +|++.|+. .|+..          ..+...|...+...|..+.
T Consensus        75 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~  148 (292)
T TIGR01777        75 TEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAAQ  148 (292)
T ss_pred             CHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHHhh
Confidence                 245678999999999999998864  45555553 45532          1122245555666666554

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.58  E-value=2.4e-14  Score=116.21  Aligned_cols=139  Identities=8%  Similarity=-0.018  Sum_probs=96.1

Q ss_pred             CCCCeEEEEcC--CchhHHHHHHHHHHCCCeEEEeecCCCCc------ccc-------cCC-----CCeEEEEccC--CC
Q 029125           54 PPSEKLLVLGG--NGFVGSHICREALDRGLTVASLSRSGRSS------LRD-------SWA-----NNVIWHQGNL--LS  111 (198)
Q Consensus        54 ~~~~~vlvtGa--tG~iG~~l~~~l~~~g~~V~~l~r~~~~~------~~~-------~~~-----~~~~~~~~D~--~d  111 (198)
                      .++|+++||||  +++||.++++.|+++|++|++ .|+.+..      ...       ...     .....+.+|+  .+
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   85 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT   85 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence            57899999999  799999999999999999988 5542210      000       001     1146788888  33


Q ss_pred             HH------------------HHHHHhc-------CCCEEEEccccC----C--------CCccceehhhHHHHHHHHHHH
Q 029125          112 SD------------------SWKEALD-------GVTAVISCVGGF----G--------SNSYMYKINGTANINAIRAAS  154 (198)
Q Consensus       112 ~~------------------~~~~~~~-------~~d~vi~~ag~~----~--------~~~~~~~~n~~~~~~~~~a~~  154 (198)
                      ++                  ++.++++       ++|++|||||..    .        .|...+++|+.+.+.+++++.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~  165 (303)
T PLN02730         86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFG  165 (303)
T ss_pred             cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            22                  5555443       589999999632    1        235567999999998888875


Q ss_pred             Hc--CCCEEEEeeccccCCCCCCc-chHHHHHHHHHHHHHhh
Q 029125          155 EK--GVKRFVYISAADFGVANYLL-QGYYEGKRAAETELLTR  193 (198)
Q Consensus       155 ~~--~~~~~v~~Ss~~~~~~~~~~-~~Y~~sK~~~e~~l~~~  193 (198)
                      ..  .-.+||++||.....+.+.. ..|+.+|++.+.+.+..
T Consensus       166 p~m~~~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~l  207 (303)
T PLN02730        166 PIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVL  207 (303)
T ss_pred             HHHhcCCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHH
Confidence            43  12689999984322333333 47999999999887755

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.58  E-value=4.3e-14  Score=112.40  Aligned_cols=131  Identities=30%  Similarity=0.330  Sum_probs=103.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCCCCc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS  136 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~  136 (198)
                      ++|+||||||++|++++++|+++|++|.++.|+++......  .++++..+|+.+++.+...++++|.++++.+... +.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~--~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~-~~   77 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA--GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLD-GS   77 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc--CCcEEEEeccCCHhHHHHHhccccEEEEEecccc-cc
Confidence            47999999999999999999999999999999977644333  7899999999999999999999999999988655 33


Q ss_pred             c-ceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          137 Y-MYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       137 ~-~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      . ..........+..+++. .++++++++|..  +........|..+|..+|..++++
T Consensus        78 ~~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~--~~~~~~~~~~~~~~~~~e~~l~~s  132 (275)
T COG0702          78 DAFRAVQVTAVVRAAEAAG-AGVKHGVSLSVL--GADAASPSALARAKAAVEAALRSS  132 (275)
T ss_pred             cchhHHHHHHHHHHHHHhc-CCceEEEEeccC--CCCCCCccHHHHHHHHHHHHHHhc
Confidence            3 33344444444444443 346778888775  444456678999999999999887

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.54  E-value=8.3e-14  Score=105.07  Aligned_cols=136  Identities=20%  Similarity=0.210  Sum_probs=98.5

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCC-C-ccc------ccCCCCeEEEEccCCCHHHHHHHhcC-------
Q 029125           58 KLLVLGGNGFVGSHICREALDRG-LTVASLSRSGR-S-SLR------DSWANNVIWHQGNLLSSDSWKEALDG-------  121 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~-~-~~~------~~~~~~~~~~~~D~~d~~~~~~~~~~-------  121 (198)
                      +++||||+|+||..+++.|++++ .+|+++.|+.. . ...      ......+.++.+|++|++++.++++.       
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            58999999999999999999997 58999999832 1 111      11245789999999999999998853       


Q ss_pred             CCEEEEccccCCC----------CccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 029125          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      ++.|||++|...+          ....+...+.|..++.++.....++.||++||...-.+......|+.+....+.+.+
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~gq~~YaaAN~~lda~a~  161 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPGQSAYAAANAFLDALAR  161 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TTBHHHHHHHHHHHHHHH
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcchHhHHHHHHHHHHHHH
Confidence            5899999996532          123456778899999999988889999999995433444567889999999888776


Q ss_pred             hh
Q 029125          192 TR  193 (198)
Q Consensus       192 ~~  193 (198)
                      ..
T Consensus       162 ~~  163 (181)
T PF08659_consen  162 QR  163 (181)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.54  E-value=2.2e-13  Score=112.92  Aligned_cols=146  Identities=23%  Similarity=0.212  Sum_probs=103.7

Q ss_pred             CCCCCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccC----CCCeEEEEccCCCHHHHH-HHhc---
Q 029125           49 VNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSW----ANNVIWHQGNLLSSDSWK-EALD---  120 (198)
Q Consensus        49 ~~~~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~----~~~~~~~~~D~~d~~~~~-~~~~---  120 (198)
                      ....+.++.+|+|+||||.+|+.+++.|+++|+.|.++.|+..+......    ......+..|...+.++. .+.+   
T Consensus        72 ~~~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~  151 (411)
T KOG1203|consen   72 PNNNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVP  151 (411)
T ss_pred             CCCCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcc
Confidence            33445667899999999999999999999999999999998765332211    234455555554443332 2222   


Q ss_pred             -CCCEEEEccccCCCC---ccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcch------HHHHHHHHHHHH
Q 029125          121 -GVTAVISCVGGFGSN---SYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQG------YYEGKRAAETEL  190 (198)
Q Consensus       121 -~~d~vi~~ag~~~~~---~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~------Y~~sK~~~e~~l  190 (198)
                       ...+++-++|.....   ...+.+++.|++|++++|+..|++||+++|+........+...      +..+|..+|.++
T Consensus       152 ~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~~~~~~~~k~~~e~~~  231 (411)
T KOG1203|consen  152 KGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLLNGLVLKAKLKAEKFL  231 (411)
T ss_pred             ccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhhhhhhhHHHHhHHHHH
Confidence             234666666643333   3556799999999999999999999999998654443333333      448899999999


Q ss_pred             HhhC
Q 029125          191 LTRY  194 (198)
Q Consensus       191 ~~~~  194 (198)
                      +++.
T Consensus       232 ~~Sg  235 (411)
T KOG1203|consen  232 QDSG  235 (411)
T ss_pred             HhcC
Confidence            8773

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.53  E-value=2.7e-13  Score=99.99  Aligned_cols=126  Identities=26%  Similarity=0.332  Sum_probs=99.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCC-CC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG-SN  135 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~-~~  135 (198)
                      |||.|+||+|.+|.+++++..++||+|+++.|++.+....   .++.+++.|+.|++.+.+.+.+.|+||..-+... ..
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~   77 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDN   77 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---ccceeecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence            6899999999999999999999999999999997764321   5778999999999999999999999999877642 22


Q ss_pred             ccceehhhHHHHHHHHHHHHcCCCEEEEeeccc----------cCCCCCCcchHHHHHHHHHH
Q 029125          136 SYMYKINGTANINAIRAASEKGVKRFVYISAAD----------FGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       136 ~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~----------~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      ...   .......+++..+..++.|++.++.+.          ...+..|...|..++..+|.
T Consensus        78 ~~~---~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~  137 (211)
T COG2910          78 DEL---HSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEF  137 (211)
T ss_pred             hHH---HHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHH
Confidence            221   122244567778888999999998742          23456667788888888883

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.51  E-value=1.9e-13  Score=103.96  Aligned_cols=138  Identities=18%  Similarity=0.148  Sum_probs=101.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHC-CCeEEEeecC-CCCccc--c---cCCCCeEEEEccCCCHHHHHHHhc--------
Q 029125           56 SEKLLVLGGNGFVGSHICREALDR-GLTVASLSRS-GRSSLR--D---SWANNVIWHQGNLLSSDSWKEALD--------  120 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~r~-~~~~~~--~---~~~~~~~~~~~D~~d~~~~~~~~~--------  120 (198)
                      ++.|+||||+.+||.-|+++|++. |.++++..++ ++....  .   ...+++++++.|+++.+++..+.+        
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~   82 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS   82 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence            456999999999999999999976 6676666555 444211  1   125789999999999887776653        


Q ss_pred             -CCCEEEEccccCCC-----------CccceehhhHHHHHHHHHH----HHcC-----------CCEEEEeeccc---cC
Q 029125          121 -GVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAA----SEKG-----------VKRFVYISAAD---FG  170 (198)
Q Consensus       121 -~~d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~----~~~~-----------~~~~v~~Ss~~---~~  170 (198)
                       ++|++|+|||....           |-..+++|..++..+.+++    ++..           ...||++||..   .+
T Consensus        83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~  162 (249)
T KOG1611|consen   83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGG  162 (249)
T ss_pred             CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCC
Confidence             57999999996432           2346899999998777665    2221           22699999843   23


Q ss_pred             CCCCCcchHHHHHHHHHHHHHhh
Q 029125          171 VANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       171 ~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ..+.+..+|.+||.+...+.++-
T Consensus       163 ~~~~~~~AYrmSKaAlN~f~ksl  185 (249)
T KOG1611|consen  163 FRPGGLSAYRMSKAALNMFAKSL  185 (249)
T ss_pred             CCCcchhhhHhhHHHHHHHHHHh
Confidence            45677889999999998877754

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.51  E-value=1.5e-13  Score=134.95  Aligned_cols=138  Identities=16%  Similarity=0.128  Sum_probs=107.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHC-CCeEEEeecCCCCc----------------------------------------
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSS----------------------------------------   93 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~r~~~~~----------------------------------------   93 (198)
                      ++++++||||+++||..++++|+++ |++|++++|+....                                        
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5789999999999999999999998 69999999982100                                        


Q ss_pred             ----c------c--ccCCCCeEEEEccCCCHHHHHHHhc------CCCEEEEccccCC----------CCccceehhhHH
Q 029125           94 ----L------R--DSWANNVIWHQGNLLSSDSWKEALD------GVTAVISCVGGFG----------SNSYMYKINGTA  145 (198)
Q Consensus        94 ----~------~--~~~~~~~~~~~~D~~d~~~~~~~~~------~~d~vi~~ag~~~----------~~~~~~~~n~~~  145 (198)
                          .      .  ......+.++.+|++|.+++.++++      ++|+||||||...          .|...+++|+.|
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence                0      0  0112457889999999998887765      4899999999643          235678999999


Q ss_pred             HHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          146 NINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       146 ~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      .+++++++.....++||++||...-.+......|+.+|.+.+.+.+.
T Consensus      2156 ~~~Ll~al~~~~~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~ 2202 (2582)
T TIGR02813      2156 LLSLLAALNAENIKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQ 2202 (2582)
T ss_pred             HHHHHHHHHHhCCCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHH
Confidence            99999999877778999999954333445667899999988876654

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.47  E-value=1.3e-13  Score=100.98  Aligned_cols=138  Identities=17%  Similarity=0.101  Sum_probs=109.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc---CCCEEEEc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD---GVTAVISC  128 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~vi~~  128 (198)
                      ..++.|++||+.-+||+.++..|++.|.+|+++.|.+.....  ...+.-++.+.+|+.+-+.+.+.+-   .+|.++||
T Consensus         5 laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNN   84 (245)
T KOG1207|consen    5 LAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNN   84 (245)
T ss_pred             ccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhcc
Confidence            457899999999999999999999999999999998654222  2223347889999998777777765   36999999


Q ss_pred             cccC----------CCCccceehhhHHHHHHHHHHHH----cC-CCEEEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 029125          129 VGGF----------GSNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       129 ag~~----------~~~~~~~~~n~~~~~~~~~a~~~----~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      ||..          ..++..|++|+.+.+++.+...+    .+ .+.|+++||.....+...++.|.++|++.+-+.+
T Consensus        85 AgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk  162 (245)
T KOG1207|consen   85 AGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAALDMLTK  162 (245)
T ss_pred             chhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHHHHHHHH
Confidence            9953          14577899999999988887533    33 3479999996666777888999999999886654

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.46  E-value=1.1e-12  Score=96.32  Aligned_cols=136  Identities=20%  Similarity=0.232  Sum_probs=112.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      .+++..+|.||||-.|..+++.+++.+  .+|+++.|++...  ......+.....|....+++...++++|+.|.+.|.
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d--~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgT   93 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPD--PATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALGT   93 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCC--ccccceeeeEEechHHHHHHHhhhcCCceEEEeecc
Confidence            467899999999999999999999998  4999999986332  122456778888998889999999999999999986


Q ss_pred             CC---CCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          132 FG---SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       132 ~~---~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      .+   ..+..+.++..-.+.+.+++++.|+++|+++||.  |..+...-.|-..|..+|.-+.+-
T Consensus        94 TRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~--GAd~sSrFlY~k~KGEvE~~v~eL  156 (238)
T KOG4039|consen   94 TRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSA--GADPSSRFLYMKMKGEVERDVIEL  156 (238)
T ss_pred             cccccccCceEeechHHHHHHHHHHHhCCCeEEEEEecc--CCCcccceeeeeccchhhhhhhhc
Confidence            54   2466788998888999999999999999999997  445555567999999999866553

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.46  E-value=2e-12  Score=104.81  Aligned_cols=140  Identities=9%  Similarity=-0.022  Sum_probs=90.6

Q ss_pred             CCCCeEEEEcCC--chhHHHHHHHHHHCCCeEEEeecCC---------CCcc---c-c-cCCC-----CeEEEEccCCCH
Q 029125           54 PPSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSG---------RSSL---R-D-SWAN-----NVIWHQGNLLSS  112 (198)
Q Consensus        54 ~~~~~vlvtGat--G~iG~~l~~~l~~~g~~V~~l~r~~---------~~~~---~-~-~~~~-----~~~~~~~D~~d~  112 (198)
                      .++|+++||||+  .+||+++++.|+++|++|++.++.+         ....   . . ....     .+..+..|+.+.
T Consensus         6 ~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~   85 (299)
T PRK06300          6 LTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTP   85 (299)
T ss_pred             CCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCC
Confidence            467899999995  8999999999999999999976531         0000   0 0 0000     011122333332


Q ss_pred             H------------------HHHHHh-------cCCCEEEEccccCC------------CCccceehhhHHHHHHHHHHHH
Q 029125          113 D------------------SWKEAL-------DGVTAVISCVGGFG------------SNSYMYKINGTANINAIRAASE  155 (198)
Q Consensus       113 ~------------------~~~~~~-------~~~d~vi~~ag~~~------------~~~~~~~~n~~~~~~~~~a~~~  155 (198)
                      +                  ++.+++       .++|++|||||...            .|...+++|+.+.+++++++..
T Consensus        86 ~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p  165 (299)
T PRK06300         86 EDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGP  165 (299)
T ss_pred             EEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            2                  234333       35899999997421            2345679999999999888854


Q ss_pred             c--CCCEEEEeeccccCCCCCCc-chHHHHHHHHHHHHHhh
Q 029125          156 K--GVKRFVYISAADFGVANYLL-QGYYEGKRAAETELLTR  193 (198)
Q Consensus       156 ~--~~~~~v~~Ss~~~~~~~~~~-~~Y~~sK~~~e~~l~~~  193 (198)
                      .  ..++++++||.....+.+.. ..|+.+|++.+.+.+..
T Consensus       166 ~m~~~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~l  206 (299)
T PRK06300        166 IMNPGGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVL  206 (299)
T ss_pred             HhhcCCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHH
Confidence            3  23579999884322333333 37999999999877754

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.44  E-value=1.5e-13  Score=104.63  Aligned_cols=142  Identities=48%  Similarity=0.747  Sum_probs=127.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCCCCc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS  136 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~  136 (198)
                      ...++.|+.||.|.++++.....++.|.++.|+..+..+..+...+.++.+|....+-+...+.++..++-++|.++...
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn~~  132 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGNII  132 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCccchH
Confidence            46789999999999999999999999999999988877777888999999999887777888889999999999888888


Q ss_pred             cceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhhCCCCC
Q 029125          137 YMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRYPYGG  198 (198)
Q Consensus       137 ~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~~~~~g  198 (198)
                      .+..+|.+...+.++++++.|+++|+|+|...||.++....+|..+|..+|..+...+++.|
T Consensus       133 ~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~~~~~~i~rGY~~gKR~AE~Ell~~~~~rg  194 (283)
T KOG4288|consen  133 LMDRINGTANINAVKAAAKAGVPRFVYISAHDFGLPPLIPRGYIEGKREAEAELLKKFRFRG  194 (283)
T ss_pred             HHHHhccHhhHHHHHHHHHcCCceEEEEEhhhcCCCCccchhhhccchHHHHHHHHhcCCCc
Confidence            88889999999999999999999999999988888888888999999999998887766543

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.44  E-value=7.7e-13  Score=105.13  Aligned_cols=135  Identities=19%  Similarity=0.137  Sum_probs=101.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc------cccCCCCeEEEEccCCCHHH----HHHHhcC--CCE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL------RDSWANNVIWHQGNLLSSDS----WKEALDG--VTA  124 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~------~~~~~~~~~~~~~D~~d~~~----~~~~~~~--~d~  124 (198)
                      .=.+|||||.+||++.+++|+++|.+|++++|+.++..      .....-.+.++..|+++.+.    +.+.+.+  +.+
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI  129 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI  129 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence            56899999999999999999999999999999976521      12223458889999988665    4444444  569


Q ss_pred             EEEccccCCCC------------ccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          125 VISCVGGFGSN------------SYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       125 vi~~ag~~~~~------------~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      +|||+|...+.            +....+|+.++..+.+..    .+.+.+-|+++||...-.+.+..+.|+++|...+.
T Consensus       130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~v~~  209 (312)
T KOG1014|consen  130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAFVDF  209 (312)
T ss_pred             EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHHHHH
Confidence            99999965421            345678888876555554    44455679999997767788888999999998876


Q ss_pred             HHH
Q 029125          189 ELL  191 (198)
Q Consensus       189 ~l~  191 (198)
                      +.+
T Consensus       210 ~S~  212 (312)
T KOG1014|consen  210 FSR  212 (312)
T ss_pred             HHH
Confidence            544

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.41  E-value=6.8e-13  Score=104.12  Aligned_cols=131  Identities=17%  Similarity=0.090  Sum_probs=98.6

Q ss_pred             cCC--chhHHHHHHHHHHCCCeEEEeecCCCCc---ccc-cCCCCeEEEEccCCCHHHHHHHh--------cCCCEEEEc
Q 029125           63 GGN--GFVGSHICREALDRGLTVASLSRSGRSS---LRD-SWANNVIWHQGNLLSSDSWKEAL--------DGVTAVISC  128 (198)
Q Consensus        63 Gat--G~iG~~l~~~l~~~g~~V~~l~r~~~~~---~~~-~~~~~~~~~~~D~~d~~~~~~~~--------~~~d~vi~~  128 (198)
                      |++  ++||.+++++|+++|++|++++|+..+.   ... ....+..++.+|++|++++.+++        .++|++|||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            666  9999999999999999999999986641   110 01123457999999998888764        458999999


Q ss_pred             cccCCC--------------CccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          129 VGGFGS--------------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       129 ag~~~~--------------~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      +|....              |...+++|+.+.+.+++++.+.  .-+++|++||.....+.+....|+.+|++.+.+++.
T Consensus        81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~  160 (241)
T PF13561_consen   81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLTRS  160 (241)
T ss_dssp             EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHH
T ss_pred             ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHHHH
Confidence            985432              1334688888998888887442  125899999965555566677999999999998876


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       161 l  161 (241)
T PF13561_consen  161 L  161 (241)
T ss_dssp             H
T ss_pred             H
Confidence            4

...

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.40  E-value=1.8e-12  Score=101.86  Aligned_cols=116  Identities=16%  Similarity=0.053  Sum_probs=90.4

Q ss_pred             HHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc----CCCEEEEccccC--CCCccceehhhHH
Q 029125           72 ICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD----GVTAVISCVGGF--GSNSYMYKINGTA  145 (198)
Q Consensus        72 l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~d~vi~~ag~~--~~~~~~~~~n~~~  145 (198)
                      ++++|+++|++|++++|+..+.      ....++.+|++|.+++.++++    ++|+||||||..  ..++..+++|+.+
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~------~~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~~   74 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGM------TLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFLG   74 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchh------hhhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchHH
Confidence            4788999999999999976542      123578999999999998876    589999999964  3456788999999


Q ss_pred             HHHHHHHHHHc--CCCEEEEeec-cccC--------------------------CCCCCcchHHHHHHHHHHHHHhh
Q 029125          146 NINAIRAASEK--GVKRFVYISA-ADFG--------------------------VANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       146 ~~~~~~a~~~~--~~~~~v~~Ss-~~~~--------------------------~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      +..+++++...  ..++||++|| ..++                          .+.+....|+.+|++.+.+.+..
T Consensus        75 ~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l  151 (241)
T PRK12428         75 LRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQ  151 (241)
T ss_pred             HHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHH
Confidence            99999998653  2369999999 4443                          13345678999999999877643

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.39  E-value=5.7e-12  Score=106.14  Aligned_cols=141  Identities=19%  Similarity=0.216  Sum_probs=106.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC---CeEEEeecCCCCccc--------------------ccCCCCeEEEEccCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLR--------------------DSWANNVIWHQGNLL  110 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g---~~V~~l~r~~~~~~~--------------------~~~~~~~~~~~~D~~  110 (198)
                      ..+|+|+|||||||+|+.++++|++.-   -+++++.|.......                    .....++..+.||+.
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            467899999999999999999999864   388999987644211                    001256788999997


Q ss_pred             C------HHHHHHHhcCCCEEEEccccCCCCc---cceehhhHHHHHHHHHHHHc-CCCEEEEeeccc------------
Q 029125          111 S------SDSWKEALDGVTAVISCVGGFGSNS---YMYKINGTANINAIRAASEK-GVKRFVYISAAD------------  168 (198)
Q Consensus       111 d------~~~~~~~~~~~d~vi~~ag~~~~~~---~~~~~n~~~~~~~~~a~~~~-~~~~~v~~Ss~~------------  168 (198)
                      +      +.++..+.+++|+|||+|+..++.+   ....+|..|++++++.|++. ..+.++++|++-            
T Consensus        90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~  169 (467)
T KOG1221|consen   90 EPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKP  169 (467)
T ss_pred             CcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccc
Confidence            6      3556667789999999999876554   45689999999999999886 477899999841            


Q ss_pred             cCCC----------------------------CCCcchHHHHHHHHHHHHHhhC
Q 029125          169 FGVA----------------------------NYLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       169 ~~~~----------------------------~~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                      |..+                            ....+.|.-+|+.+|.++.+..
T Consensus       170 y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~  223 (467)
T KOG1221|consen  170 YPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA  223 (467)
T ss_pred             cCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc
Confidence            1100                            1124679999999999988764

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.39  E-value=1.8e-12  Score=103.12  Aligned_cols=134  Identities=19%  Similarity=0.288  Sum_probs=100.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc--c-----CCCCeEEEEccCCCHHHHHHHhcC-------C
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD--S-----WANNVIWHQGNLLSSDSWKEALDG-------V  122 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~--~-----~~~~~~~~~~D~~d~~~~~~~~~~-------~  122 (198)
                      .+|+|||++.++|..++..+..+|++|.++.|+.++..+.  .     ....+.+..+|+.|.+++..++++       +
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            6899999999999999999999999999999987652211  0     112367899999998888877653       6


Q ss_pred             CEEEEccccCC-----C-----CccceehhhHHHHHHHHHHHHc-----CCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          123 TAVISCVGGFG-----S-----NSYMYKINGTANINAIRAASEK-----GVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       123 d~vi~~ag~~~-----~-----~~~~~~~n~~~~~~~~~a~~~~-----~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      |.+|+|||..-     +     .....++|..|+.++++++...     +.++|+.+||...-.+-...+.|..+|.+..
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~alr  193 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFALR  193 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHHH
Confidence            99999999531     1     1345789999999999887432     2348999999543444455677888887765


Q ss_pred             HHH
Q 029125          188 TEL  190 (198)
Q Consensus       188 ~~l  190 (198)
                      .+.
T Consensus       194 gLa  196 (331)
T KOG1210|consen  194 GLA  196 (331)
T ss_pred             HHH
Confidence            443

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.32  E-value=7.1e-12  Score=98.19  Aligned_cols=105  Identities=21%  Similarity=0.287  Sum_probs=73.8

Q ss_pred             EEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-CCCEEEEccccC--C-C
Q 029125           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-GVTAVISCVGGF--G-S  134 (198)
Q Consensus        59 vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-~~d~vi~~ag~~--~-~  134 (198)
                      |+||||||+||++|+.+|.+.||+|++++|++.+..... ...+.       ..+.+.+..+ ++|+|||.||..  . .
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~-~~~v~-------~~~~~~~~~~~~~DavINLAG~~I~~rr   72 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL-HPNVT-------LWEGLADALTLGIDAVINLAGEPIAERR   72 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc-Ccccc-------ccchhhhcccCCCCEEEECCCCcccccc
Confidence            689999999999999999999999999999977643221 11211       2233445455 799999999942  2 2


Q ss_pred             C-----ccceehhhHHHHHHHHHHHH--cCCCEEEEeeccc-cCC
Q 029125          135 N-----SYMYKINGTANINAIRAASE--KGVKRFVYISAAD-FGV  171 (198)
Q Consensus       135 ~-----~~~~~~n~~~~~~~~~a~~~--~~~~~~v~~Ss~~-~~~  171 (198)
                      |     +..++..+..|..++++..+  ..++.+|.-|... ||.
T Consensus        73 Wt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~  117 (297)
T COG1090          73 WTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGH  117 (297)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecC
Confidence            4     23456778888888888864  4466676666643 543

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.30  E-value=1.8e-12  Score=95.00  Aligned_cols=133  Identities=18%  Similarity=0.213  Sum_probs=101.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc--ccccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS--LRDSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~--~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++-..+||||.+++|...+++|.++|..|.+++-..++-  ..+....++.+...|++.++++..++.       ..|+
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            4566789999999999999999999999999999765542  224456789999999999999988775       4799


Q ss_pred             EEEccccCC----------------CCccceehhhHHHHHHHHHHHH---------cC-CCEEEEeeccccCCCCCCcch
Q 029125          125 VISCVGGFG----------------SNSYMYKINGTANINAIRAASE---------KG-VKRFVYISAADFGVANYLLQG  178 (198)
Q Consensus       125 vi~~ag~~~----------------~~~~~~~~n~~~~~~~~~a~~~---------~~-~~~~v~~Ss~~~~~~~~~~~~  178 (198)
                      .+||||...                ++...+++|+.|++|+++....         .| .+.||+..|...-+.......
T Consensus        87 ~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqaa  166 (260)
T KOG1199|consen   87 LVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQAA  166 (260)
T ss_pred             eeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchhh
Confidence            999999421                2345678999999999887531         11 225777777544455666778


Q ss_pred             HHHHHHHH
Q 029125          179 YYEGKRAA  186 (198)
Q Consensus       179 Y~~sK~~~  186 (198)
                      |.+||.+.
T Consensus       167 ysaskgai  174 (260)
T KOG1199|consen  167 YSASKGAI  174 (260)
T ss_pred             hhcccCce
Confidence            99998754

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.24  E-value=3.2e-11  Score=91.98  Aligned_cols=125  Identities=26%  Similarity=0.290  Sum_probs=93.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEcccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGG  131 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~  131 (198)
                      +++|+|||++|.+|++|.+.+.++|.  +-.++.-+               -.+|+++.++.+++|+  ++..|||.|+.
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s---------------kd~DLt~~a~t~~lF~~ekPthVIhlAAm   65 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS---------------KDADLTNLADTRALFESEKPTHVIHLAAM   65 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc---------------ccccccchHHHHHHHhccCCceeeehHhh
Confidence            57999999999999999999999874  22222111               1358999999999996  58999999874


Q ss_pred             CC-------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccC---------------CCCCCcchHHHHHHHHHH
Q 029125          132 FG-------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFG---------------VANYLLQGYYEGKRAAET  188 (198)
Q Consensus       132 ~~-------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~---------------~~~~~~~~Y~~sK~~~e~  188 (198)
                      .+       .+..+++.|+.-.-|++..|-+.|++.++++.| +.|.               .+.+..-+|+.+|.++.-
T Consensus        66 VGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv  145 (315)
T KOG1431|consen   66 VGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDV  145 (315)
T ss_pred             hcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHH
Confidence            32       346778999999999999999999988887766 5443               223334579999988776


Q ss_pred             HHHhhCC
Q 029125          189 ELLTRYP  195 (198)
Q Consensus       189 ~l~~~~~  195 (198)
                      .-+.+..
T Consensus       146 ~n~aY~~  152 (315)
T KOG1431|consen  146 QNQAYRQ  152 (315)
T ss_pred             HHHHHHH
Confidence            5566543

>PRK06720 hypothetical protein; Provisional

Probab=99.23  E-value=1.5e-10  Score=86.39  Aligned_cols=79  Identities=11%  Similarity=0.225  Sum_probs=62.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---c--cCCCCeEEEEccCCCHHHHHHHh-------cC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEAL-------DG  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---~--~~~~~~~~~~~D~~d~~~~~~~~-------~~  121 (198)
                      .++++++||||+++||..++..|+++|++|++++|+.+....   .  .......++.+|++|.+++.+++       .+
T Consensus        14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~   93 (169)
T PRK06720         14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR   93 (169)
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999999999987543110   0  11235678899999998877654       35


Q ss_pred             CCEEEEccccC
Q 029125          122 VTAVISCVGGF  132 (198)
Q Consensus       122 ~d~vi~~ag~~  132 (198)
                      +|++|||||..
T Consensus        94 iDilVnnAG~~  104 (169)
T PRK06720         94 IDMLFQNAGLY  104 (169)
T ss_pred             CCEEEECCCcC
Confidence            89999999953

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.15  E-value=2.8e-10  Score=85.49  Aligned_cols=97  Identities=14%  Similarity=0.188  Sum_probs=73.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc----ccCCCCeEEEEccCCCHHHHHHHhcC-------CCEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALDG-------VTAV  125 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~~-------~d~v  125 (198)
                      |+++||||+|++|. +++.|+++|++|.+++|++.....    ......+.++.+|+.|.+++..++++       +|++
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            47999999987765 999999999999999987543211    01134678899999999998887753       5666


Q ss_pred             EEccccCCCCccceehhhHHHHHHHHHHHHcCCC----EEEEeec
Q 029125          126 ISCVGGFGSNSYMYKINGTANINAIRAASEKGVK----RFVYISA  166 (198)
Q Consensus       126 i~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~----~~v~~Ss  166 (198)
                      |+..            .+.++.++..+|++.+++    +|+++=.
T Consensus        80 v~~v------------h~~~~~~~~~~~~~~gv~~~~~~~~h~~g  112 (177)
T PRK08309         80 VAWI------------HSSAKDALSVVCRELDGSSETYRLFHVLG  112 (177)
T ss_pred             EEec------------cccchhhHHHHHHHHccCCCCceEEEEeC
Confidence            6543            445677899999999988    7776643

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.12  E-value=5.9e-10  Score=90.99  Aligned_cols=114  Identities=17%  Similarity=0.199  Sum_probs=85.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCccccc-CCCCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDS-WANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      ..+|++|+|+|++|.+|..++..|+.++  .++.++++......... .+........+.+|+.++.+.++++|+||+++
T Consensus         5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVita   84 (321)
T PTZ00325          5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICA   84 (321)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECC
Confidence            3578899999999999999999998665  68999998322211111 11111223345666666678899999999999


Q ss_pred             ccCCC----CccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          130 GGFGS----NSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       130 g~~~~----~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      |....    +...+..|.....++++++.+++++++|+++|
T Consensus        85 G~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~S  125 (321)
T PTZ00325         85 GVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVS  125 (321)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            97443    35667899999999999999999999999998

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.12  E-value=8.2e-10  Score=85.46  Aligned_cols=132  Identities=19%  Similarity=0.239  Sum_probs=101.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc----cc-------ccCCCCeEEEEccCCCHHHHHHHhc--C
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS----LR-------DSWANNVIWHQGNLLSSDSWKEALD--G  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~----~~-------~~~~~~~~~~~~D~~d~~~~~~~~~--~  121 (198)
                      ..|..||||-||.=|++|++.|+.+|++|..+.|+.+.-    .+       ...........+|++|...+..++.  +
T Consensus        27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ik  106 (376)
T KOG1372|consen   27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIK  106 (376)
T ss_pred             cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccC
Confidence            456889999999999999999999999999999875431    11       1113457888999999999998876  5


Q ss_pred             CCEEEEccccCC------CCccceehhhHHHHHHHHHHHHcCCC---EEEEeecc-ccCC----------CCCCcchHHH
Q 029125          122 VTAVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVK---RFVYISAA-DFGV----------ANYLLQGYYE  181 (198)
Q Consensus       122 ~d~vi~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~---~~v~~Ss~-~~~~----------~~~~~~~Y~~  181 (198)
                      ++-|+|.|+...      -++..-+++..|++.++++.+..+..   +|...|++ -||.          |-.|.++|++
T Consensus       107 PtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~  186 (376)
T KOG1372|consen  107 PTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAA  186 (376)
T ss_pred             chhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHH
Confidence            789999988432      34556688999999999999876532   77777774 4663          3356789999


Q ss_pred             HHHHH
Q 029125          182 GKRAA  186 (198)
Q Consensus       182 sK~~~  186 (198)
                      +|..+
T Consensus       187 aKmy~  191 (376)
T KOG1372|consen  187 AKMYG  191 (376)
T ss_pred             hhhhh
Confidence            99764

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=99.02  E-value=1.9e-09  Score=89.50  Aligned_cols=90  Identities=24%  Similarity=0.298  Sum_probs=72.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      |++|+|.|+ |++|+.++..|+++| .+|++.+|+..+...  .....+++.+.+|+.|.+++.+++++.|+||+++.++
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~   79 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF   79 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence            679999999 999999999999998 899999998665322  2223489999999999999999999999999999764


Q ss_pred             CCCccceehhhHHHHHHHHHHHHcCC
Q 029125          133 GSNSYMYKINGTANINAIRAASEKGV  158 (198)
Q Consensus       133 ~~~~~~~~~n~~~~~~~~~a~~~~~~  158 (198)
                      -            ...++++|.+.|+
T Consensus        80 ~------------~~~i~ka~i~~gv   93 (389)
T COG1748          80 V------------DLTILKACIKTGV   93 (389)
T ss_pred             h------------hHHHHHHHHHhCC
Confidence            2            1245666666654

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.01  E-value=6.4e-10  Score=84.93  Aligned_cols=135  Identities=11%  Similarity=0.062  Sum_probs=92.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEc--------cCCCHHHHHHHhc------
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQG--------NLLSSDSWKEALD------  120 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~--------D~~d~~~~~~~~~------  120 (198)
                      .++.++|||++.+||..++..+...+.+.....+......    ..++.+..+        |++....+.+.++      
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~----~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~   80 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE----LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKG   80 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc----ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcC
Confidence            4568999999999999999999988866554444322211    233444443        4343332333332      


Q ss_pred             -CCCEEEEccccCC-------------CCccceehhhHHHHHHHHHHHH----cC-CCEEEEeeccccCCCCCCcchHHH
Q 029125          121 -GVTAVISCVGGFG-------------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYE  181 (198)
Q Consensus       121 -~~d~vi~~ag~~~-------------~~~~~~~~n~~~~~~~~~a~~~----~~-~~~~v~~Ss~~~~~~~~~~~~Y~~  181 (198)
                       +.|+||||||..+             .|...|+.|+....-+.+.+..    .. .+.+|++||...-.+-..+..|+.
T Consensus        81 gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~  160 (253)
T KOG1204|consen   81 GKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCS  160 (253)
T ss_pred             CceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhh
Confidence             3699999999543             3567889999988876666533    22 367999999666677778889999


Q ss_pred             HHHHHHHHHHhh
Q 029125          182 GKRAAETELLTR  193 (198)
Q Consensus       182 sK~~~e~~l~~~  193 (198)
                      +|++-+.+.+.-
T Consensus       161 ~KaAr~m~f~~l  172 (253)
T KOG1204|consen  161 SKAARNMYFMVL  172 (253)
T ss_pred             hHHHHHHHHHHH
Confidence            999999877643

>PLN00106 malate dehydrogenase

Probab=98.98  E-value=4.2e-09  Score=86.08  Aligned_cols=112  Identities=19%  Similarity=0.169  Sum_probs=83.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCcccccC-CCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDSW-ANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ...+|+|+|++|.+|..++..|+.++  .++.++++++........ .........++.+.+++.+.++++|+|||+||.
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~   96 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGV   96 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCC
Confidence            34699999999999999999999776  489999987622111111 111112223444455678899999999999996


Q ss_pred             CC----CCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          132 FG----SNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       132 ~~----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      ..    .+......|.....++++.+.+.+++++++++|
T Consensus        97 ~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvS  135 (323)
T PLN00106         97 PRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIIS  135 (323)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            43    345667899999999999999999999998887

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.97  E-value=5.8e-09  Score=80.99  Aligned_cols=134  Identities=16%  Similarity=0.146  Sum_probs=93.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC-----eEEEeecCCCCccc-----ccC----CCCeEEEEccCCCHHHHHHH---
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL-----TVASLSRSGRSSLR-----DSW----ANNVIWHQGNLLSSDSWKEA---  118 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~-----~V~~l~r~~~~~~~-----~~~----~~~~~~~~~D~~d~~~~~~~---  118 (198)
                      .|.++|||++++||.+|+.+|++...     ++.+.+|+-++..+     ...    ..+++++.+|+++..++..+   
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            46899999999999999999998753     35556676554221     111    23689999999997666555   


Q ss_pred             ----hcCCCEEEEccccCCCC-------------------------------------ccceehhhHHHHHHHHHHHHc-
Q 029125          119 ----LDGVTAVISCVGGFGSN-------------------------------------SYMYKINGTANINAIRAASEK-  156 (198)
Q Consensus       119 ----~~~~d~vi~~ag~~~~~-------------------------------------~~~~~~n~~~~~~~~~a~~~~-  156 (198)
                          ++..|.|+.|||.+..+                                     ...|+.|+.|++-+++..... 
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence                44689999999954210                                     235899999999877776432 


Q ss_pred             ---CCCEEEEeeccccCCC---------CCCcchHHHHHHHHHHH
Q 029125          157 ---GVKRFVYISAADFGVA---------NYLLQGYYEGKRAAETE  189 (198)
Q Consensus       157 ---~~~~~v~~Ss~~~~~~---------~~~~~~Y~~sK~~~e~~  189 (198)
                         ....+|++||......         .....+|..||.+.+-+
T Consensus       163 ~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlL  207 (341)
T KOG1478|consen  163 CHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLL  207 (341)
T ss_pred             hcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHH
Confidence               2338999999543221         12245799999988754

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.92  E-value=9.3e-09  Score=84.34  Aligned_cols=111  Identities=11%  Similarity=0.029  Sum_probs=74.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC-------CeEEEeecCCCCcccc----cCCCCeEEEEccCCCHHHHHHHhcCCCE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG-------LTVASLSRSGRSSLRD----SWANNVIWHQGNLLSSDSWKEALDGVTA  124 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g-------~~V~~l~r~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~~~d~  124 (198)
                      +.+|+||||+|++|.+++..|+..+       .+|+++++.+......    ...+.......|+....++.+.++++|+
T Consensus         2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDi   81 (325)
T cd01336           2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDV   81 (325)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCE
Confidence            4589999999999999999999854       5899999965321110    0001111222355445667788999999


Q ss_pred             EEEccccCCC----CccceehhhHHHHHHHHHHHHcC-CCE-EEEeec
Q 029125          125 VISCVGGFGS----NSYMYKINGTANINAIRAASEKG-VKR-FVYISA  166 (198)
Q Consensus       125 vi~~ag~~~~----~~~~~~~n~~~~~~~~~a~~~~~-~~~-~v~~Ss  166 (198)
                      |||+||....    ....++.|+.-...+.+...+.. .+- ++.+|.
T Consensus        82 VI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          82 AILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             EEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            9999997543    24567788887777788887774 344 444543

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09620 hypothetical protein; Provisional

Probab=98.79  E-value=3e-08  Score=77.38  Aligned_cols=78  Identities=24%  Similarity=0.267  Sum_probs=54.4

Q ss_pred             CCCeEEEEcCC----------------chhHHHHHHHHHHCCCeEEEeecCCCCccccc-CCCCeEEEEccCCCHHHHHH
Q 029125           55 PSEKLLVLGGN----------------GFVGSHICREALDRGLTVASLSRSGRSSLRDS-WANNVIWHQGNLLSSDSWKE  117 (198)
Q Consensus        55 ~~~~vlvtGat----------------G~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~  117 (198)
                      .+++|+||+|.                ||+|.+|+++|+++|++|+++++......... ....+..+.+|....+.+.+
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~   81 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKS   81 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHH
Confidence            46899999875                99999999999999999999986422111100 01123345553333467777


Q ss_pred             Hhc--CCCEEEEccccC
Q 029125          118 ALD--GVTAVISCVGGF  132 (198)
Q Consensus       118 ~~~--~~d~vi~~ag~~  132 (198)
                      +++  ++|+|||+|+..
T Consensus        82 ~~~~~~~D~VIH~AAvs   98 (229)
T PRK09620         82 IITHEKVDAVIMAAAGS   98 (229)
T ss_pred             HhcccCCCEEEECcccc
Confidence            784  689999999963

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.78  E-value=3.1e-07  Score=76.27  Aligned_cols=78  Identities=14%  Similarity=0.125  Sum_probs=59.0

Q ss_pred             CCCCeEEEEcCCchhHHH--HHHHHHHCCCeEEEeecCCCCcc--------------c---ccCCCCeEEEEccCCCHHH
Q 029125           54 PPSEKLLVLGGNGFVGSH--ICREALDRGLTVASLSRSGRSSL--------------R---DSWANNVIWHQGNLLSSDS  114 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~--l~~~l~~~g~~V~~l~r~~~~~~--------------~---~~~~~~~~~~~~D~~d~~~  114 (198)
                      ..+|++||||+++++|.+  +++.| +.|++|+++++...+..              .   ......+..+.+|++++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            346899999999999999  89999 99999988885321100              0   1112346788999999988


Q ss_pred             HHHHhc-------CCCEEEEccccC
Q 029125          115 WKEALD-------GVTAVISCVGGF  132 (198)
Q Consensus       115 ~~~~~~-------~~d~vi~~ag~~  132 (198)
                      +.++++       ++|+||||+|..
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccC
Confidence            776654       589999999854

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.77  E-value=3.8e-08  Score=82.65  Aligned_cols=73  Identities=36%  Similarity=0.485  Sum_probs=57.8

Q ss_pred             EEEEcCCchhHHHHHHHHHHCC-C-eEEEeecCCCCcccc--c-CCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           59 LLVLGGNGFVGSHICREALDRG-L-TVASLSRSGRSSLRD--S-WANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        59 vlvtGatG~iG~~l~~~l~~~g-~-~V~~l~r~~~~~~~~--~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      |+|.|+ |++|+.+++.|++++ . +|++.+|+..+....  . ...++..+.+|+.|.+++.+++++.|+|||+++++
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~   78 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF   78 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence            789999 999999999999987 4 899999987652221  1 35689999999999999999999999999999975

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.75  E-value=7.2e-08  Score=74.36  Aligned_cols=133  Identities=14%  Similarity=0.097  Sum_probs=93.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHC-CCe-EEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEcc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDR-GLT-VASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCV  129 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~-g~~-V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~a  129 (198)
                      ....+|+|||+-|.+|..++..|..+ |.+ |++.+..+++.  .. ...--++..|+.|...+++++-  .+|.+||..
T Consensus        42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~--~V-~~~GPyIy~DILD~K~L~eIVVn~RIdWL~HfS  118 (366)
T KOG2774|consen   42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA--NV-TDVGPYIYLDILDQKSLEEIVVNKRIDWLVHFS  118 (366)
T ss_pred             CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch--hh-cccCCchhhhhhccccHHHhhcccccceeeeHH
Confidence            34579999999999999999999876 754 44444433221  11 1233577889999998988763  699999987


Q ss_pred             ccCC-----CCccceehhhHHHHHHHHHHHHcCCCEEEEeecc-ccCCC-----------CCCcchHHHHHHHHHHHH
Q 029125          130 GGFG-----SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA-----------NYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       130 g~~~-----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~-~~~~~-----------~~~~~~Y~~sK~~~e~~l  190 (198)
                      +...     .-....++|+.|.-|+++.+++++. ++..-|+. .+|..           ..|..-||.||..+|-+=
T Consensus       119 ALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~G  195 (366)
T KOG2774|consen  119 ALLSAVGETNVPLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLG  195 (366)
T ss_pred             HHHHHhcccCCceeeeecchhhhHHHHHHHHcCe-eEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHH
Confidence            6321     2345688999999999999999877 34444553 35432           123467999999988643

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.73  E-value=6.8e-08  Score=75.49  Aligned_cols=72  Identities=11%  Similarity=0.056  Sum_probs=51.1

Q ss_pred             EEE-cCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCC--HHHHHHHhcCCCEEEEccccCC
Q 029125           60 LVL-GGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLS--SDSWKEALDGVTAVISCVGGFG  133 (198)
Q Consensus        60 lvt-GatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~d~vi~~ag~~~  133 (198)
                      .|| .++|++|.+|+++|+++|++|+++.|......  ....++.++.++..+  .+.+.+.++++|+|||+||...
T Consensus        19 ~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd   93 (229)
T PRK06732         19 GITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD   93 (229)
T ss_pred             eecCccchHHHHHHHHHHHhCCCEEEEEECcccccC--CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence            455 46799999999999999999999987543211  112466776654332  2455566778999999999753

>PRK05086 malate dehydrogenase; Provisional

Probab=98.68  E-value=2.5e-07  Score=75.55  Aligned_cols=108  Identities=18%  Similarity=0.173  Sum_probs=76.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHH---CCCeEEEeecCCCCccc-cc-CC-CCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           57 EKLLVLGGNGFVGSHICREALD---RGLTVASLSRSGRSSLR-DS-WA-NNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~---~g~~V~~l~r~~~~~~~-~~-~~-~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      |+|+|+||+|.+|++++..|..   .++++.+++|++..... .. .. +....+.+  .+.+++.+.++++|+||.++|
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIitaG   78 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISAG   78 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcCC
Confidence            6899999999999999988855   24688888886432110 01 11 11122333  223445667789999999999


Q ss_pred             cCCCC----ccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          131 GFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       131 ~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      .....    ...+..|......+++++.+.+.++++.+.|
T Consensus        79 ~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            75432    4557788888899999999999998888876

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.62  E-value=1.3e-07  Score=76.70  Aligned_cols=76  Identities=22%  Similarity=0.429  Sum_probs=62.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHH----CCCeEEEeecCCCCccc----------ccCCCCeEEEEccCCCHHHHHHHhcCC
Q 029125           57 EKLLVLGGNGFVGSHICREALD----RGLTVASLSRSGRSSLR----------DSWANNVIWHQGNLLSSDSWKEALDGV  122 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~----~g~~V~~l~r~~~~~~~----------~~~~~~~~~~~~D~~d~~~~~~~~~~~  122 (198)
                      -.++|.||+||.|.++++++++    .|...-+..|++.+..+          ......+ ++.+|..|++++.++.+..
T Consensus         6 yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak~~   84 (423)
T KOG2733|consen    6 YDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAKQA   84 (423)
T ss_pred             eeEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHhhh
Confidence            4689999999999999999999    67888888998755211          1122334 8899999999999999999


Q ss_pred             CEEEEccccCC
Q 029125          123 TAVISCVGGFG  133 (198)
Q Consensus       123 d~vi~~ag~~~  133 (198)
                      -+|+||+|+..
T Consensus        85 ~vivN~vGPyR   95 (423)
T KOG2733|consen   85 RVIVNCVGPYR   95 (423)
T ss_pred             EEEEeccccce
Confidence            99999999875

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.59  E-value=1.5e-07  Score=71.64  Aligned_cols=78  Identities=19%  Similarity=0.178  Sum_probs=61.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccC--CCCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSW--ANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~--~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      .++++++|+||+|++|+.+++.|++.|++|++++|+..+...  ...  ..+..+..+|..+.+++.++++++|+||++.
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at  105 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG  105 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence            456899999999999999999999999999999987543111  000  1234566778889999999999999999976


Q ss_pred             cc
Q 029125          130 GG  131 (198)
Q Consensus       130 g~  131 (198)
                      ..
T Consensus       106 ~~  107 (194)
T cd01078         106 AA  107 (194)
T ss_pred             CC
Confidence            53

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.57  E-value=8.8e-07  Score=70.24  Aligned_cols=74  Identities=12%  Similarity=0.232  Sum_probs=57.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEccccC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGF  132 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~  132 (198)
                      |+|+|+||||. |+.+++.|.++|++|++..++........ ..+...+..+..|.+++.+.++  ++|+||+.+.++
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~-~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPf   76 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP-IHQALTVHTGALDPQELREFLKRHSIDILVDATHPF   76 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc-ccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHH
Confidence            57999999999 99999999999999999999865432211 2223345566778888888886  599999998764

This enzyme was found to be a monomer by gel filtration.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.52  E-value=5.8e-07  Score=75.62  Aligned_cols=73  Identities=18%  Similarity=0.200  Sum_probs=57.7

Q ss_pred             CCCCeEEEEcC----------------CchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHH
Q 029125           54 PPSEKLLVLGG----------------NGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE  117 (198)
Q Consensus        54 ~~~~~vlvtGa----------------tG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~  117 (198)
                      ..+++|+||||                +|.+|.+++++|.++|++|+++++.....    .+.+  +..+|+++.+++.+
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~----~~~~--~~~~dv~~~~~~~~  259 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLP----TPAG--VKRIDVESAQEMLD  259 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcccc----CCCC--cEEEccCCHHHHHH
Confidence            46789999999                88899999999999999999998865321    1122  34579999887776


Q ss_pred             Hh----cCCCEEEEccccC
Q 029125          118 AL----DGVTAVISCVGGF  132 (198)
Q Consensus       118 ~~----~~~d~vi~~ag~~  132 (198)
                      ++    .++|++||+||..
T Consensus       260 ~v~~~~~~~DilI~~Aav~  278 (399)
T PRK05579        260 AVLAALPQADIFIMAAAVA  278 (399)
T ss_pred             HHHHhcCCCCEEEEccccc
Confidence            65    4689999999964

>cd00704 MDH Malate dehydrogenase

Probab=98.45  E-value=1.8e-06  Score=70.83  Aligned_cols=101  Identities=13%  Similarity=0.036  Sum_probs=69.7

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCC-------eEEEeecCCCCcccccCCCCeEEEEccCCCH-----------HHHHHHh
Q 029125           58 KLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRSSLRDSWANNVIWHQGNLLSS-----------DSWKEAL  119 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~-------~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~-----------~~~~~~~  119 (198)
                      +|.|+||+|.+|..++..|+..|.       ++.++++++..       +..+....|+.|.           ....+.+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-------~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~   74 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-------KALEGVVMELQDCAFPLLKGVVITTDPEEAF   74 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-------CccceeeeehhhhcccccCCcEEecChHHHh
Confidence            799999999999999999998662       48999987521       1112223333332           3456788


Q ss_pred             cCCCEEEEccccCCCC----ccceehhhHHHHHHHHHHHHcC-CCE-EEEee
Q 029125          120 DGVTAVISCVGGFGSN----SYMYKINGTANINAIRAASEKG-VKR-FVYIS  165 (198)
Q Consensus       120 ~~~d~vi~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~-~~~-~v~~S  165 (198)
                      +++|+|||+||....+    .+.+..|..-...+.+...+.. ... ++.+|
T Consensus        75 ~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          75 KDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             CCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            9999999999964422    3456677777778888888873 554 44444

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.44  E-value=2e-06  Score=70.56  Aligned_cols=101  Identities=12%  Similarity=0.018  Sum_probs=70.1

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCC-------eEEEeecCCCCcccccCCCCeEEEEccCCCHH-----------HHHHHh
Q 029125           58 KLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRSSLRDSWANNVIWHQGNLLSSD-----------SWKEAL  119 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~-------~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~-----------~~~~~~  119 (198)
                      +|.|+|++|.+|..++..|+..+.       +++++++.+....       .+....|+.|..           +..+.+
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~-------a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~   73 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKV-------LEGVVMELMDCAFPLLDGVVPTHDPAVAF   73 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccc-------cceeEeehhcccchhcCceeccCChHHHh
Confidence            589999999999999999998553       5899998654311       122233443332           345778


Q ss_pred             cCCCEEEEccccCCC----CccceehhhHHHHHHHHHHHHcC-CCE-EEEee
Q 029125          120 DGVTAVISCVGGFGS----NSYMYKINGTANINAIRAASEKG-VKR-FVYIS  165 (198)
Q Consensus       120 ~~~d~vi~~ag~~~~----~~~~~~~n~~~~~~~~~a~~~~~-~~~-~v~~S  165 (198)
                      +++|+||++||....    +......|+.-...+.+...+.. .+- ++.+|
T Consensus        74 ~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs  125 (324)
T TIGR01758        74 TDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG  125 (324)
T ss_pred             CCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            899999999996432    34556778887788888888874 544 44444

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.34  E-value=1.6e-06  Score=70.13  Aligned_cols=76  Identities=13%  Similarity=0.155  Sum_probs=58.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCe-EEEeecCC---CCccc--c---cCCCCeEEEEccCCCHHHHHHHhcCCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLT-VASLSRSG---RSSLR--D---SWANNVIWHQGNLLSSDSWKEALDGVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~-V~~l~r~~---~~~~~--~---~~~~~~~~~~~D~~d~~~~~~~~~~~d~  124 (198)
                      .++++++|+|| |++|++++..|++.|++ |++++|+.   .+..+  .   .....+.+..+|+.+.+++.+.++.+|+
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di  202 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI  202 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence            45689999999 89999999999999985 99999985   22111  0   1112345667899888888888889999


Q ss_pred             EEEccc
Q 029125          125 VISCVG  130 (198)
Q Consensus       125 vi~~ag  130 (198)
                      |||+..
T Consensus       203 lINaTp  208 (289)
T PRK12548        203 LVNATL  208 (289)
T ss_pred             EEEeCC
Confidence            999875

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.29  E-value=1.9e-06  Score=67.25  Aligned_cols=66  Identities=14%  Similarity=0.131  Sum_probs=47.0

Q ss_pred             EEEc-CCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHh-------cCCCEEEEcccc
Q 029125           60 LVLG-GNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL-------DGVTAVISCVGG  131 (198)
Q Consensus        60 lvtG-atG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-------~~~d~vi~~ag~  131 (198)
                      .||. ++|++|.++++.|+++|++|+++++.....  .   .  ....+|+.+.+++.+++       .++|++|||||.
T Consensus        18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l~--~---~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv   90 (227)
T TIGR02114        18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRALK--P---E--PHPNLSIREIETTKDLLITLKELVQEHDILIHSMAV   90 (227)
T ss_pred             eecCCcccHHHHHHHHHHHHCCCEEEEEcChhhcc--c---c--cCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEe
Confidence            4454 589999999999999999999987632111  0   0  12346888876666543       368999999995


Q ss_pred             C
Q 029125          132 F  132 (198)
Q Consensus       132 ~  132 (198)
                      .
T Consensus        91 ~   91 (227)
T TIGR02114        91 S   91 (227)
T ss_pred             c
Confidence            3

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=98.27  E-value=2.8e-06  Score=68.56  Aligned_cols=77  Identities=21%  Similarity=0.321  Sum_probs=58.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc--cccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      ....++|.||+||.|..++++|.++|.+-.+..|+..+-.  ......+...+  ++.+++.++++..+..+|+||+|++
T Consensus         5 ~e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~--p~~~p~~~~~~~~~~~VVlncvGPy   82 (382)
T COG3268           5 REYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVF--PLGVPAALEAMASRTQVVLNCVGPY   82 (382)
T ss_pred             cceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCcccccc--CCCCHHHHHHHHhcceEEEeccccc
Confidence            3457999999999999999999999998888888755421  11222333333  4445999999999999999999986


Q ss_pred             C
Q 029125          133 G  133 (198)
Q Consensus       133 ~  133 (198)
                      .
T Consensus        83 t   83 (382)
T COG3268          83 T   83 (382)
T ss_pred             c
Confidence            4

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.27  E-value=7.3e-06  Score=68.82  Aligned_cols=98  Identities=15%  Similarity=0.163  Sum_probs=67.8

Q ss_pred             CCCCeEEEEcC----------------CchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHH-H
Q 029125           54 PPSEKLLVLGG----------------NGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSW-K  116 (198)
Q Consensus        54 ~~~~~vlvtGa----------------tG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~-~  116 (198)
                      .++++|+||||                +|.+|.+++++|..+|++|+++.+.....    .+..+  ..+|+.+.+++ .
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----~~~~~--~~~~v~~~~~~~~  256 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----TPPGV--KSIKVSTAEEMLE  256 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----CCCCc--EEEEeccHHHHHH
Confidence            56899999998                35699999999999999999988764321    12233  45788888777 4


Q ss_pred             HHh----cCCCEEEEccccCCCC------------ccceehhhHHHHHHHHHHHHcC
Q 029125          117 EAL----DGVTAVISCVGGFGSN------------SYMYKINGTANINAIRAASEKG  157 (198)
Q Consensus       117 ~~~----~~~d~vi~~ag~~~~~------------~~~~~~n~~~~~~~~~a~~~~~  157 (198)
                      .++    .++|++|++||.....            ...+.+++.-+-.+++...+..
T Consensus       257 ~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~  313 (390)
T TIGR00521       257 AALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK  313 (390)
T ss_pred             HHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhC
Confidence            444    3689999999964311            1123355555566777766543

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.22  E-value=1.2e-05  Score=62.63  Aligned_cols=74  Identities=24%  Similarity=0.361  Sum_probs=61.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc-cCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEcccc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-SWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVGG  131 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag~  131 (198)
                      |+++|.|+ |-+|..+++.|.++|++|+++++++....+. ........+.+|-+|++.+.++ ++++|+++-..+.
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~   76 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN   76 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence            57889997 9999999999999999999999987653321 1124678999999999999998 7889999987763

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.20  E-value=2.9e-06  Score=69.76  Aligned_cols=74  Identities=22%  Similarity=0.243  Sum_probs=53.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHC-C-CeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDR-G-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~-g-~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ...+++|+||||+|++|+.++++|+.+ | .+++++.|+..+....  ..  ++..+|+.   ++.+++.++|+|||+++
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~L--a~--el~~~~i~---~l~~~l~~aDiVv~~ts  224 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQEL--QA--ELGGGKIL---SLEEALPEADIVVWVAS  224 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHH--HH--HhccccHH---hHHHHHccCCEEEECCc
Confidence            456789999999999999999999865 5 5899998875432111  01  11123433   46678889999999998


Q ss_pred             cCC
Q 029125          131 GFG  133 (198)
Q Consensus       131 ~~~  133 (198)
                      ...
T Consensus       225 ~~~  227 (340)
T PRK14982        225 MPK  227 (340)
T ss_pred             CCc
Confidence            643

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=98.18  E-value=0.00015  Score=53.27  Aligned_cols=133  Identities=20%  Similarity=0.176  Sum_probs=78.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCC---HHHH----HHHhc--CCCEEEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLS---SDSW----KEALD--GVTAVIS  127 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d---~~~~----~~~~~--~~d~vi~  127 (198)
                      .+|+|.||-|-+|+++++.|..++|-|.-++-.++.+..     .-.++.+|-.=   ++.+    -+.+.  ++|.||+
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad-----~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~C   78 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQAD-----SSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVFC   78 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccccc-----ceEEecCCcchhHHHHHHHHHHHHhhcccccceEEE
Confidence            589999999999999999999999999888877655321     11233333211   2222    22232  5899999


Q ss_pred             ccccCCCC-----------ccceehhhHHHHHHHHHHHHc-CCCEEEEeec-cccCCCCCCcchHHHHHHHHHHHHHhhC
Q 029125          128 CVGGFGSN-----------SYMYKINGTANINAIRAASEK-GVKRFVYISA-ADFGVANYLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       128 ~ag~~~~~-----------~~~~~~n~~~~~~~~~a~~~~-~~~~~v~~Ss-~~~~~~~~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                      .||.+...           +..+.-.+...-.-...+.++ ..+-++-+.. ...-.+.+...+|+.+|+++.+++++-.
T Consensus        79 VAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgMIGYGMAKaAVHqLt~SLa  158 (236)
T KOG4022|consen   79 VAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGMIGYGMAKAAVHQLTSSLA  158 (236)
T ss_pred             eeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCcccchhHHHHHHHHHHHHhc
Confidence            99865311           111211111111111112221 2233554444 3334566778899999999999988753

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.17  E-value=6.3e-05  Score=58.03  Aligned_cols=138  Identities=9%  Similarity=0.041  Sum_probs=84.6

Q ss_pred             CCCCeEEEEcCC--chhHHHHHHHHHHCCCeEEEeecCCCCc--ccc--cCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSS--LRD--SWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGat--G~iG~~l~~~l~~~g~~V~~l~r~~~~~--~~~--~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++|+++|+|-.  ..|+-.+++.|.++|.++......+.-.  ..+  .......+++||+++.++++++|+       
T Consensus         4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g   83 (259)
T COG0623           4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWG   83 (259)
T ss_pred             cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhC
Confidence            578999999964  6899999999999999988877654211  110  011235689999999999988875       


Q ss_pred             CCCEEEEccccCCCC----------cc----ceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHH
Q 029125          121 GVTAVISCVGGFGSN----------SY----MYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKR  184 (198)
Q Consensus       121 ~~d~vi~~ag~~~~~----------~~----~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~  184 (198)
                      ++|.++|+.+.....          .+    ..++-.-.-..+.++++..  +-..+|-++=......-+.-+.-+.+|+
T Consensus        84 ~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vPnYNvMGvAKA  163 (259)
T COG0623          84 KLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPNYNVMGVAKA  163 (259)
T ss_pred             cccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecCCCchhHHHHH
Confidence            579999999864311          01    1122222222444444432  2234554332111122333446788999


Q ss_pred             HHHHHHH
Q 029125          185 AAETELL  191 (198)
Q Consensus       185 ~~e~~l~  191 (198)
                      +.|.-++
T Consensus       164 aLEasvR  170 (259)
T COG0623         164 ALEASVR  170 (259)
T ss_pred             HHHHHHH
Confidence            9886443

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=98.09  E-value=1.8e-05  Score=66.38  Aligned_cols=98  Identities=18%  Similarity=0.284  Sum_probs=62.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHC-CCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHH-HhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE-ALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~d~vi~~ag~  131 (198)
                      .++++|.|.||||++|+.+++.|.++ ..+|..+.++.... +............|+.+.++++. .++++|+||.+.+.
T Consensus        36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG-~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~  114 (381)
T PLN02968         36 EEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAG-QSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPH  114 (381)
T ss_pred             ccccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcC-CCchhhCccccCccccceecCCHHHhcCCCEEEEcCCH
Confidence            36679999999999999999999998 57999988753321 11000111222234433322332 25789999998764


Q ss_pred             CCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       132 ~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      .            ....++..+ +.+ .++|-.|+
T Consensus       115 ~------------~s~~i~~~~-~~g-~~VIDlSs  135 (381)
T PLN02968        115 G------------TTQEIIKAL-PKD-LKIVDLSA  135 (381)
T ss_pred             H------------HHHHHHHHH-hCC-CEEEEcCc
Confidence            1            344566665 345 47888887

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.08  E-value=1.9e-05  Score=57.06  Aligned_cols=102  Identities=16%  Similarity=0.166  Sum_probs=69.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCccc---------ccCCCCeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~---------~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      +||.|+|++|.+|.+++..|...+  .++++++++++....         ........+...|       .+.+++.|+|
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~-------~~~~~~aDiv   73 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD-------YEALKDADIV   73 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS-------GGGGTTESEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccc-------ccccccccEE
Confidence            589999999999999999999987  589999987543111         0011122333222       3457789999


Q ss_pred             EEccccCCCC----ccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       126 i~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                      |.++|....+    .+.+..|..-...+.+...+.+.+-++.+-
T Consensus        74 vitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivv  117 (141)
T PF00056_consen   74 VITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVV  117 (141)
T ss_dssp             EETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-
T ss_pred             EEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEe
Confidence            9999965432    345677888778888888887765444433

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=98.06  E-value=5.8e-05  Score=62.32  Aligned_cols=70  Identities=19%  Similarity=0.284  Sum_probs=47.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC---eEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      +++|+|.||||++|+.+++.|.++++   ++..+.+.........+ .+......|+.+.     .++++|+||.+++.
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~-~g~~i~v~d~~~~-----~~~~vDvVf~A~g~   73 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSF-KGKELKVEDLTTF-----DFSGVDIALFSAGG   73 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeee-CCceeEEeeCCHH-----HHcCCCEEEECCCh
Confidence            46899999999999999999999876   45777765433211111 2234444455432     24689999998874

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.02  E-value=5.6e-05  Score=62.03  Aligned_cols=134  Identities=8%  Similarity=-0.036  Sum_probs=82.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC-------eEEEeecCCCCc--cc--ccCCCCeEEEE--ccCCCHHHHHHHhcCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRSS--LR--DSWANNVIWHQ--GNLLSSDSWKEALDGV  122 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~-------~V~~l~r~~~~~--~~--~~~~~~~~~~~--~D~~d~~~~~~~~~~~  122 (198)
                      +++|.|+|++|.+|..++..|+..|.       ++++++..+...  ..  ....+....+.  ..+.  ....+.+++.
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~~~~~~da   79 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT--DDPNVAFKDA   79 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe--cCcHHHhCCC
Confidence            46999999999999999999998874       799999854321  10  00000000000  0111  1224668899


Q ss_pred             CEEEEccccCCC----CccceehhhHHHHHHHHHHHHcCC-C-EEEEeec-cc---c---C-C-CCCCcchHHHHHHHHH
Q 029125          123 TAVISCVGGFGS----NSYMYKINGTANINAIRAASEKGV-K-RFVYISA-AD---F---G-V-ANYLLQGYYEGKRAAE  187 (198)
Q Consensus       123 d~vi~~ag~~~~----~~~~~~~n~~~~~~~~~a~~~~~~-~-~~v~~Ss-~~---~---~-~-~~~~~~~Y~~sK~~~e  187 (198)
                      |+||.+||....    ..+.+..|..-...+.+...+.+. . .+|.+|. ..   |   . . ..++...|+.++...+
T Consensus        80 DivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~ViG~t~LDs~  159 (322)
T cd01338          80 DWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAMTRLDHN  159 (322)
T ss_pred             CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHheEEehHHHHH
Confidence            999999997442    234567777777788888888773 5 4455543 21   0   0 1 1344556777777766


Q ss_pred             HHHH
Q 029125          188 TELL  191 (198)
Q Consensus       188 ~~l~  191 (198)
                      ++..
T Consensus       160 Rl~~  163 (322)
T cd01338         160 RAKS  163 (322)
T ss_pred             HHHH
Confidence            6544

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.96  E-value=3.9e-05  Score=71.34  Aligned_cols=77  Identities=21%  Similarity=0.132  Sum_probs=59.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC-Ce-------------EEEeecCCCCcccc-cCCCCeEEEEccCCCHHHHHHH
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG-LT-------------VASLSRSGRSSLRD-SWANNVIWHQGNLLSSDSWKEA  118 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g-~~-------------V~~l~r~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~  118 (198)
                      ..+++|+|.|+ |++|+..++.|.+.+ ++             |.+.+++....... ...++++.+..|+.|.+++.++
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~  645 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKY  645 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHh
Confidence            45789999997 999999999998753 33             77777765432211 1123678899999999999999


Q ss_pred             hcCCCEEEEcccc
Q 029125          119 LDGVTAVISCVGG  131 (198)
Q Consensus       119 ~~~~d~vi~~ag~  131 (198)
                      ++++|+||++...
T Consensus       646 v~~~DaVIsalP~  658 (1042)
T PLN02819        646 VSQVDVVISLLPA  658 (1042)
T ss_pred             hcCCCEEEECCCc
Confidence            9999999998864

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.94  E-value=5.6e-05  Score=62.06  Aligned_cols=111  Identities=13%  Similarity=0.044  Sum_probs=69.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC-------eEEEeecCCCC--cccc--cCCCCeEEEEccCCCHHHHHHHhcCCCE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRS--SLRD--SWANNVIWHQGNLLSSDSWKEALDGVTA  124 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~-------~V~~l~r~~~~--~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~d~  124 (198)
                      +.+|.|+|++|++|..++..|+..+.       ++++++..+..  ....  ...+.......+..-.....+.++++|+
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDv   82 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFKDVDA   82 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhCCCCE
Confidence            46899999999999999999998873       79999986422  1110  0000000000011001123466889999


Q ss_pred             EEEccccCC----CCccceehhhHHHHHHHHHHHHcCC-CEEEEeec
Q 029125          125 VISCVGGFG----SNSYMYKINGTANINAIRAASEKGV-KRFVYISA  166 (198)
Q Consensus       125 vi~~ag~~~----~~~~~~~~n~~~~~~~~~a~~~~~~-~~~v~~Ss  166 (198)
                      ||.+||...    +..+.+..|..-...+++.+.+.+. +-++.+-|
T Consensus        83 VVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        83 ALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             EEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            999999643    2244567777777888888888765 54444433

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.94  E-value=5.5e-05  Score=64.76  Aligned_cols=73  Identities=21%  Similarity=0.199  Sum_probs=55.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc----ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ++++|+|+|+++ +|..+++.|+++|++|++.+++.....+    .....++.++.+|..+     +...++|+||+++|
T Consensus         4 ~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~~g   77 (450)
T PRK14106          4 KGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVSPG   77 (450)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEECCC
Confidence            568999999866 9999999999999999999987532211    1112357788888765     33567999999998


Q ss_pred             cCC
Q 029125          131 GFG  133 (198)
Q Consensus       131 ~~~  133 (198)
                      ...
T Consensus        78 ~~~   80 (450)
T PRK14106         78 VPL   80 (450)
T ss_pred             CCC
Confidence            643

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.91  E-value=7.1e-05  Score=56.56  Aligned_cols=64  Identities=20%  Similarity=0.204  Sum_probs=40.0

Q ss_pred             CCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHH----HHHhcCCCEEEEccccCC
Q 029125           64 GNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSW----KEALDGVTAVISCVGGFG  133 (198)
Q Consensus        64 atG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~----~~~~~~~d~vi~~ag~~~  133 (198)
                      .+|..|.+|++.+..+|++|+++.....-.    .+.++..+.++  ..+++    .+.+++.|++||+|++..
T Consensus        27 SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~----~p~~~~~i~v~--sa~em~~~~~~~~~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   27 SSGKMGAALAEEAARRGAEVTLIHGPSSLP----PPPGVKVIRVE--SAEEMLEAVKELLPSADIIIMAAAVSD   94 (185)
T ss_dssp             --SHHHHHHHHHHHHTT-EEEEEE-TTS--------TTEEEEE-S--SHHHHHHHHHHHGGGGSEEEE-SB--S
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCcccc----ccccceEEEec--chhhhhhhhccccCcceeEEEecchhh
Confidence            678999999999999999999998763211    13567776544  44443    344557899999999643

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.90  E-value=2.9e-05  Score=66.41  Aligned_cols=73  Identities=21%  Similarity=0.210  Sum_probs=59.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEccc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG  130 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag  130 (198)
                      |+|+|+|+ |.+|+++++.|.++|++|+++++++..........++.++.+|.++.+.+.++ ++++|.||.+..
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~   74 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTD   74 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecC
Confidence            47999998 99999999999999999999998765422111124688999999999999888 788999988764

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.90  E-value=8.7e-05  Score=60.55  Aligned_cols=105  Identities=18%  Similarity=0.147  Sum_probs=69.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCccc-ccCCC---CeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR-DSWAN---NVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~-~~~~~---~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ++|.|+|++|.+|.+++..|+..+  .++.+++.+ ..... ....+   ...+...  ...+++.+.+++.|+||.+||
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~-~a~g~alDL~~~~~~~~i~~~--~~~~~~y~~~~daDivvitaG   77 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV-NTPGVAADLSHINTPAKVTGY--LGPEELKKALKGADVVVIPAG   77 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC-ccceeehHhHhCCCcceEEEe--cCCCchHHhcCCCCEEEEeCC
Confidence            489999999999999999999888  489999986 21111 11111   1111111  012335677899999999999


Q ss_pred             cCCC----CccceehhhHHHHHHHHHHHHcCCCEEEEe
Q 029125          131 GFGS----NSYMYKINGTANINAIRAASEKGVKRFVYI  164 (198)
Q Consensus       131 ~~~~----~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~  164 (198)
                      ....    ..+.+..|..-...+++...+.+.+-++.+
T Consensus        78 ~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~viv  115 (310)
T cd01337          78 VPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILI  115 (310)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence            6432    234567777777788888887776644433

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.89  E-value=0.0001  Score=60.89  Aligned_cols=93  Identities=18%  Similarity=0.220  Sum_probs=53.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC---eEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      +|.+|.|+||||++|+.+++.|.++++   ++..+... ....+.....+   ...++.+.+.. + ++++|++|.+.+.
T Consensus         3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~-~~aG~~l~~~~---~~l~~~~~~~~-~-~~~vD~vFla~p~   76 (336)
T PRK05671          3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASS-ESAGHSVPFAG---KNLRVREVDSF-D-FSQVQLAFFAAGA   76 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECc-ccCCCeeccCC---cceEEeeCChH-H-hcCCCEEEEcCCH
Confidence            457999999999999999999998765   33344332 22111111112   12333333221 2 4789999997753


Q ss_pred             CCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       132 ~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      .            -...+++.+.+.|+ ++|=.|+
T Consensus        77 ~------------~s~~~v~~~~~~G~-~VIDlS~   98 (336)
T PRK05671         77 A------------VSRSFAEKARAAGC-SVIDLSG   98 (336)
T ss_pred             H------------HHHHHHHHHHHCCC-eEEECch
Confidence            1            11235666666665 3554554

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.88  E-value=8.6e-05  Score=60.65  Aligned_cols=109  Identities=15%  Similarity=0.123  Sum_probs=67.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCC--CCccccc--CCCCeEEE--EccCCCHHHHHHHhcCCCEEEEc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGL--TVASLSRSG--RSSLRDS--WANNVIWH--QGNLLSSDSWKEALDGVTAVISC  128 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~--~~~~~~~--~~~~~~~~--~~D~~d~~~~~~~~~~~d~vi~~  128 (198)
                      ++|.|+|++|.+|..++..|+..|+  +|++++|.+  +......  ..+.....  ..++.-..++ +.++++|+||.+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~-~~l~~aDiViit   79 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDL-SDVAGSDIVIIT   79 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCH-HHhCCCCEEEEe
Confidence            5899999999999999999999986  599999954  2110000  00000000  0011111112 348899999999


Q ss_pred             cccCCCC----ccceehhhHHHHHHHHHHHHcCCC-EEEEeec
Q 029125          129 VGGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYISA  166 (198)
Q Consensus       129 ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~Ss  166 (198)
                      +|.....    ......|..-...+++...+.+.+ .+|.+++
T Consensus        80 ag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          80 AGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            9964322    344566777777778877776544 4555555

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK05442 malate dehydrogenase; Provisional

Probab=97.88  E-value=0.00016  Score=59.48  Aligned_cols=109  Identities=10%  Similarity=0.038  Sum_probs=68.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-------eEEEeecCCCCc--ccc--cCCCCeEEEE--ccCCCHHHHHHHhcC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRSS--LRD--SWANNVIWHQ--GNLLSSDSWKEALDG  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-------~V~~l~r~~~~~--~~~--~~~~~~~~~~--~D~~d~~~~~~~~~~  121 (198)
                      .+.+|.|+|++|.+|..++..|+..+.       ++.++++.+...  ...  ...+....+.  ..++  ....+.+++
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~y~~~~d   80 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT--DDPNVAFKD   80 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe--cChHHHhCC
Confidence            467999999999999999999988662       789999854321  100  0000000000  0111  122466889


Q ss_pred             CCEEEEccccCC----CCccceehhhHHHHHHHHHHHHcC-CC-EEEEee
Q 029125          122 VTAVISCVGGFG----SNSYMYKINGTANINAIRAASEKG-VK-RFVYIS  165 (198)
Q Consensus       122 ~d~vi~~ag~~~----~~~~~~~~n~~~~~~~~~a~~~~~-~~-~~v~~S  165 (198)
                      .|+||.+||...    +..+.+..|..-...+.+...+.. .+ .++.+|
T Consensus        81 aDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  130 (326)
T PRK05442         81 ADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG  130 (326)
T ss_pred             CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            999999999643    224456777777778888887744 34 455554

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.83  E-value=0.00013  Score=59.63  Aligned_cols=106  Identities=15%  Similarity=0.198  Sum_probs=68.8

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCcccccCCC---CeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWAN---NVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      ||.|+|++|.+|.+++..|+..+.  ++.++++++.........+   ...+....  +.+++.+.+++.|+||.++|..
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvitaG~~   78 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIPAGVP   78 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEeCCCC
Confidence            589999999999999999998874  8999998762211111111   11111101  1123557889999999999964


Q ss_pred             CC----CccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          133 GS----NSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       133 ~~----~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                      ..    ....+..|..-...+.+...+.+.+.++.+-
T Consensus        79 ~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivv  115 (312)
T TIGR01772        79 RKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVI  115 (312)
T ss_pred             CCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEe
Confidence            32    2445667777777778888777766544443

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.81  E-value=4e-05  Score=54.98  Aligned_cols=74  Identities=16%  Similarity=0.207  Sum_probs=52.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCe-EEEeecCCCCccc--ccC-CCCeEEEEccCCCHHHHHHHhcCCCEEEEc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLT-VASLSRSGRSSLR--DSW-ANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~-V~~l~r~~~~~~~--~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~  128 (198)
                      ..++++++|.|+ |+.|+.++..|.+.|.+ |+++.|+..+...  ... ...+.++..     +++.+.+.++|+||++
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~-----~~~~~~~~~~DivI~a   82 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPL-----EDLEEALQEADIVINA   82 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEG-----GGHCHHHHTESEEEE-
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeH-----HHHHHHHhhCCeEEEe
Confidence            456899999998 99999999999999975 9999998654221  111 123444433     2345677899999998


Q ss_pred             cccC
Q 029125          129 VGGF  132 (198)
Q Consensus       129 ag~~  132 (198)
                      .+..
T Consensus        83 T~~~   86 (135)
T PF01488_consen   83 TPSG   86 (135)
T ss_dssp             SSTT
T ss_pred             cCCC
Confidence            8753

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.78  E-value=0.00034  Score=57.06  Aligned_cols=101  Identities=14%  Similarity=0.197  Sum_probs=67.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCcccc--c-------CCCCeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRD--S-------WANNVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~~--~-------~~~~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      ++|.|.|+ |.+|..++..|+..|  ++|++++++++.....  .       ......+..   .+.    +.++++|+|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~----~~l~~aDIV   72 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDY----SDCKDADIV   72 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCH----HHhCCCCEE
Confidence            47999996 999999999999998  6899999976542111  0       011222222   222    236799999


Q ss_pred             EEccccCCC----CccceehhhHHHHHHHHHHHHcCCCE-EEEee
Q 029125          126 ISCVGGFGS----NSYMYKINGTANINAIRAASEKGVKR-FVYIS  165 (198)
Q Consensus       126 i~~ag~~~~----~~~~~~~n~~~~~~~~~a~~~~~~~~-~v~~S  165 (198)
                      |+++|....    ....+..|..-...+.+...+.+.+. ++.+|
T Consensus        73 Iitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          73 VITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            999996432    23455667777777788888776554 44444

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.76  E-value=6.2e-05  Score=69.69  Aligned_cols=140  Identities=21%  Similarity=0.249  Sum_probs=100.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCe-EEEeecCCCCccc-----ccC-CCC--eEEEEccCCCHHHHHHHhc----
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLT-VASLSRSGRSSLR-----DSW-ANN--VIWHQGNLLSSDSWKEALD----  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~-V~~l~r~~~~~~~-----~~~-~~~--~~~~~~D~~d~~~~~~~~~----  120 (198)
                      ...|..+|+||-|+.|..|+..|..+|.+ +++.+|+.-+.-.     ..| ..+  +.+-..|++..+....+++    
T Consensus      1766 hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~k 1845 (2376)
T KOG1202|consen 1766 HPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNK 1845 (2376)
T ss_pred             CccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhh
Confidence            45678999999999999999999999974 5555565432111     111 223  4455567766666666665    


Q ss_pred             --CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHHcC--CCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 --GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 --~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~~--~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                        -+-.|||.|...+          ++++.-+..+.|++++=+..++..  .+-||..||...|.++...+.|+-+..+.
T Consensus      1846 l~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQtNYG~aNS~M 1925 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQTNYGLANSAM 1925 (2376)
T ss_pred             cccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcccccchhhHHH
Confidence              3578888887532          223444566778887766666653  56899999988899999999999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      |++|.+.
T Consensus      1926 ERiceqR 1932 (2376)
T KOG1202|consen 1926 ERICEQR 1932 (2376)
T ss_pred             HHHHHHh
Confidence            9999865

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.74  E-value=0.00023  Score=59.02  Aligned_cols=96  Identities=17%  Similarity=0.217  Sum_probs=58.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHC-CCeEEEeecCCCCcc-cccCCCCeEEE-EccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSL-RDSWANNVIWH-QGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~r~~~~~~-~~~~~~~~~~~-~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      |++|+|+||||++|+.+++.|.+. +++++++.++..... .....+.+..+ ..++.+.+..  .++++|+||.+... 
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP~-   78 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGADVVFLALPH-   78 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH--HhcCCCEEEECCCc-
Confidence            579999999999999999999987 578877665432211 11011111111 1233333322  45789999997753 


Q ss_pred             CCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       133 ~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                                 .....++..+.+.|. ++|=.|+
T Consensus        79 -----------~~~~~~v~~a~~aG~-~VID~S~  100 (343)
T PRK00436         79 -----------GVSMDLAPQLLEAGV-KVIDLSA  100 (343)
T ss_pred             -----------HHHHHHHHHHHhCCC-EEEECCc
Confidence                       122455666666664 6776666

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.73  E-value=0.00078  Score=55.19  Aligned_cols=103  Identities=15%  Similarity=0.225  Sum_probs=69.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCcccc--------cCCCCeEEEEccCCCHHHHHHHhcCCCE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRD--------SWANNVIWHQGNLLSSDSWKEALDGVTA  124 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~~--------~~~~~~~~~~~D~~d~~~~~~~~~~~d~  124 (198)
                      .+++|.|+|+ |.+|..++..|+..|.  ++.+++++.+.....        ....++.+...   +   + +.++++|+
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~---~---~-~~~~~adi   76 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAG---D---Y-SDCKDADL   76 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeC---C---H-HHhCCCCE
Confidence            4569999998 9999999999999885  899999876542110        01122333221   2   2 34789999


Q ss_pred             EEEccccCCC----CccceehhhHHHHHHHHHHHHcCCCE-EEEee
Q 029125          125 VISCVGGFGS----NSYMYKINGTANINAIRAASEKGVKR-FVYIS  165 (198)
Q Consensus       125 vi~~ag~~~~----~~~~~~~n~~~~~~~~~a~~~~~~~~-~v~~S  165 (198)
                      ||.++|....    ....+..|..-...+++.+.+.+.+- ++.+|
T Consensus        77 vIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         77 VVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             EEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            9999996432    23456677777777788887776554 44444

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.69  E-value=0.0005  Score=54.69  Aligned_cols=68  Identities=16%  Similarity=0.224  Sum_probs=45.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHC-CCeEEEe-ecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDR-GLTVASL-SRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l-~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      +++|+|+|++|.+|+.+++.+.+. +.+++.+ ++++......        -..++...+++.++++++|+||.+..+
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~--------~~~~i~~~~dl~~ll~~~DvVid~t~p   70 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ--------GALGVAITDDLEAVLADADVLIDFTTP   70 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc--------CCCCccccCCHHHhccCCCEEEECCCH
Confidence            468999999999999999888864 5777764 4443321111        112333344566667789999988753

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.68  E-value=0.00043  Score=57.31  Aligned_cols=68  Identities=15%  Similarity=0.336  Sum_probs=44.8

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeE---EEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTV---ASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V---~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      +|+|.||||++|+.|++.|.++++.+   ..+.+.........+ .+......|+. .    ..++++|+||.++|.
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~-~~~~~~~~~~~-~----~~~~~~D~v~~a~g~   71 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTF-KGKELEVNEAK-I----ESFEGIDIALFSAGG   71 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeee-CCeeEEEEeCC-h----HHhcCCCEEEECCCH
Confidence            58999999999999999999988754   344454332111111 23445555553 2    234789999998874

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.68  E-value=0.0003  Score=57.23  Aligned_cols=108  Identities=16%  Similarity=0.138  Sum_probs=70.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCcccc--cCCCCeEEEE--ccCCCHHHHHHHhcCCCEEEEccc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRD--SWANNVIWHQ--GNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~~--~~~~~~~~~~--~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      +||.|+|+ |++|+.++..|+.++  .+++++++.+....-.  ...+...+..  ..+....+ .+.+++.|+|+-+||
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~-y~~~~~aDiVvitAG   78 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGD-YEDLKGADIVVITAG   78 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCC-hhhhcCCCEEEEeCC
Confidence            58999999 999999999998876  4899999984331110  0111111111  11111111 456789999999999


Q ss_pred             cCCC----CccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          131 GFGS----NSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       131 ~~~~----~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      ....    ..+.+..|..-...+.+...+.+.+-++++-|
T Consensus        79 ~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          79 VPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             CCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence            6543    34567788877778888888877665555544

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.66  E-value=0.00045  Score=47.80  Aligned_cols=70  Identities=17%  Similarity=0.299  Sum_probs=53.9

Q ss_pred             EEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEccc
Q 029125           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG  130 (198)
Q Consensus        59 vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag  130 (198)
                      |+|.|. |.+|..+++.|.+.+.+|+++++++.... .....++.++.+|.+|++.+.++ +++++.||-+..
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~-~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~   71 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVE-ELREEGVEVIYGDATDPEVLERAGIEKADAVVILTD   71 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHH-HHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHH-HHHhcccccccccchhhhHHhhcCccccCEEEEccC
Confidence            678887 89999999999997779999998764421 11234588999999999999885 567898887664

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.65  E-value=0.00098  Score=46.74  Aligned_cols=92  Identities=15%  Similarity=0.262  Sum_probs=52.5

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCC-CeEEE-eecCCCCc--ccccCC--CCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           58 KLLVLGGNGFVGSHICREALDRG-LTVAS-LSRSGRSS--LRDSWA--NNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g-~~V~~-l~r~~~~~--~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ||.|+||||++|+.+++.|.+.. .++.. +.++....  .....+  ....-+..+-.+.+.    +.++|+||.|.+.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Dvvf~a~~~   76 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEE----LSDVDVVFLALPH   76 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHH----HTTESEEEE-SCH
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhH----hhcCCEEEecCch
Confidence            68999999999999999999964 45444 44443121  111111  111111111122332    4789999998864


Q ss_pred             CCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       132 ~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                                  .....+.+.+.+.|. ++|=.|+
T Consensus        77 ------------~~~~~~~~~~~~~g~-~ViD~s~   98 (121)
T PF01118_consen   77 ------------GASKELAPKLLKAGI-KVIDLSG   98 (121)
T ss_dssp             ------------HHHHHHHHHHHHTTS-EEEESSS
T ss_pred             ------------hHHHHHHHHHhhCCc-EEEeCCH
Confidence                        123355666667777 5555554

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=97.64  E-value=0.00066  Score=53.96  Aligned_cols=113  Identities=17%  Similarity=0.116  Sum_probs=71.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCcccccC-CCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDSW-ANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ..+.+|.|.||+|+||+.|...|....  .+..+.|....+-..... +-+-......++-++++..++++.|+|+--||
T Consensus        26 ~~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPAG  105 (345)
T KOG1494|consen   26 QRGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIPAG  105 (345)
T ss_pred             cCcceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEecCC
Confidence            346799999999999999876555332  133333333222111100 00111112234446789999999999999999


Q ss_pred             cCC----CCccceehhhHHHHHHHHHHHHcCCC-EEEEeec
Q 029125          131 GFG----SNSYMYKINGTANINAIRAASEKGVK-RFVYISA  166 (198)
Q Consensus       131 ~~~----~~~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~Ss  166 (198)
                      ..+    ..++.|.+|-.-...+..++.+.... .+.++|.
T Consensus       106 VPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsN  146 (345)
T KOG1494|consen  106 VPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISN  146 (345)
T ss_pred             CCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecC
Confidence            765    34788999988888888888777655 4555553

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.64  E-value=0.00032  Score=58.25  Aligned_cols=95  Identities=16%  Similarity=0.197  Sum_probs=56.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHC-CCeEEEe-ecCCCC--cccccCCCCeEEE-EccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           57 EKLLVLGGNGFVGSHICREALDR-GLTVASL-SRSGRS--SLRDSWANNVIWH-QGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l-~r~~~~--~~~~~~~~~~~~~-~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ++|.|.||||++|+.+++.|.+. +.++..+ +++...  ...... +.+... ..++.+. +..++.+++|+||.+.+.
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~-~~l~~~~~~~~~~~-~~~~~~~~~DvVf~alP~   78 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVH-PHLRGLVDLNLEPI-DEEEIAEDADVVFLALPH   78 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhC-ccccccCCceeecC-CHHHhhcCCCEEEECCCc
Confidence            47999999999999999999987 5687744 543211  111101 111111 1112211 123444589999998863


Q ss_pred             CCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       132 ~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      .            ....++..+.+.| .++|=.|+
T Consensus        79 ~------------~s~~~~~~~~~~G-~~VIDlS~  100 (346)
T TIGR01850        79 G------------VSAELAPELLAAG-VKVIDLSA  100 (346)
T ss_pred             h------------HHHHHHHHHHhCC-CEEEeCCh
Confidence            1            2345566666666 47887777

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.58  E-value=8.3e-05  Score=54.19  Aligned_cols=75  Identities=15%  Similarity=0.080  Sum_probs=49.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      .++++|+|+|+ |.+|..+++.|.+.| ++|++.+|+..+.......-+...+..+..+.   .++++++|+||++....
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dvvi~~~~~~   92 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDL---EELLAEADLIINTTPVG   92 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecch---hhccccCCEEEeCcCCC
Confidence            35679999998 999999999999996 78999998754421110000111112233333   34478899999998754

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.58  E-value=0.0026  Score=55.79  Aligned_cols=142  Identities=15%  Similarity=0.090  Sum_probs=86.9

Q ss_pred             CCCCeEEEEcCC-chhHHHHHHHHHHCCCeEEEeecCCCCccc----------ccCCCCeEEEEccCCCHHHHHHHhcC-
Q 029125           54 PPSEKLLVLGGN-GFVGSHICREALDRGLTVASLSRSGRSSLR----------DSWANNVIWHQGNLLSSDSWKEALDG-  121 (198)
Q Consensus        54 ~~~~~vlvtGat-G~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----------~~~~~~~~~~~~D~~d~~~~~~~~~~-  121 (198)
                      ...+..+||||+ |.||..++..|+..|.+|++...+-+++..          ......+-++..+.....+++.+++. 
T Consensus       394 y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewI  473 (866)
T COG4982         394 YGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWI  473 (866)
T ss_pred             cccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHh
Confidence            356789999986 999999999999999999998765443211          11123466777888777777666541 


Q ss_pred             --------------------CCEEEEccccCCCC---------ccceehhhHHHHHHHHHHHHc----CCC---EEEEee
Q 029125          122 --------------------VTAVISCVGGFGSN---------SYMYKINGTANINAIRAASEK----GVK---RFVYIS  165 (198)
Q Consensus       122 --------------------~d~vi~~ag~~~~~---------~~~~~~n~~~~~~~~~a~~~~----~~~---~~v~~S  165 (198)
                                          +|.+|-+|++....         +-..++-+....+++-..++.    ++.   ++|+-.
T Consensus       474 g~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPg  553 (866)
T COG4982         474 GDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPG  553 (866)
T ss_pred             ccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecC
Confidence                                36666666642111         111223233333444444332    222   566665


Q ss_pred             ccccCCCCCCcchHHHHHHHHHHHHHhhCCC
Q 029125          166 AADFGVANYLLQGYYEGKRAAETELLTRYPY  196 (198)
Q Consensus       166 s~~~~~~~~~~~~Y~~sK~~~e~~l~~~~~~  196 (198)
                      |-.-|.. .....|+.+|.+.|.++..++..
T Consensus       554 SPNrG~F-GgDGaYgEsK~aldav~~RW~sE  583 (866)
T COG4982         554 SPNRGMF-GGDGAYGESKLALDAVVNRWHSE  583 (866)
T ss_pred             CCCCCcc-CCCcchhhHHHHHHHHHHHhhcc
Confidence            5221111 22457999999999999888643

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.58  E-value=0.00083  Score=57.51  Aligned_cols=101  Identities=18%  Similarity=0.290  Sum_probs=70.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag~  131 (198)
                      ..+++|+|.|+ |.+|+.+++.|.+.|++|++++++++.... .....++.++.+|.++++.+.++ ++++|.||-+...
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~~  307 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTND  307 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCCC
Confidence            45789999998 999999999999999999999987654211 11124678899999999988654 5688999865542


Q ss_pred             CCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       132 ~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                         .    ..|..    +...+++.+..+++....
T Consensus       308 ---~----~~n~~----~~~~~~~~~~~~ii~~~~  331 (453)
T PRK09496        308 ---D----EANIL----SSLLAKRLGAKKVIALVN  331 (453)
T ss_pred             ---c----HHHHH----HHHHHHHhCCCeEEEEEC
Confidence               1    23433    233445556666655443

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.54  E-value=0.00044  Score=56.74  Aligned_cols=110  Identities=13%  Similarity=0.179  Sum_probs=67.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCcccccC--CCCeEEE--EccCCCHHHHHHHhcCCCEEEEcc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSW--ANNVIWH--QGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~~~~--~~~~~~~--~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      +.++|.|+|| |.+|..++..++..| .++++++++++.......  .......  ...+....+++ .++++|+||.++
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVita   81 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVITA   81 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEECC
Confidence            4569999997 999999999999888 689999987644211000  0000000  00111112244 678999999999


Q ss_pred             ccCCCC----ccceehhhHHHHHHHHHHHHcCCCE-EEEeec
Q 029125          130 GGFGSN----SYMYKINGTANINAIRAASEKGVKR-FVYISA  166 (198)
Q Consensus       130 g~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~~-~v~~Ss  166 (198)
                      |.....    ...+..|..-...+++.+.+.+.+. ++++|.
T Consensus        82 g~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         82 GVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            864422    2344556555567777777766554 555554

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.54  E-value=0.00047  Score=51.29  Aligned_cols=57  Identities=26%  Similarity=0.348  Sum_probs=47.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ...+++|+|+|+++.+|..+++.|.++|.+|+++.|+.                      +++.+.+.++|+||.+.+.
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~----------------------~~l~~~l~~aDiVIsat~~   97 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT----------------------KNLKEHTKQADIVIVAVGK   97 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc----------------------hhHHHHHhhCCEEEEcCCC
Confidence            46789999999966789999999999999999998752                      3456778889999998875

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.50  E-value=0.00017  Score=50.96  Aligned_cols=89  Identities=18%  Similarity=0.279  Sum_probs=53.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHH-CCCeEEEe-ecCCCCcccccCC--CCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           57 EKLLVLGGNGFVGSHICREALD-RGLTVASL-SRSGRSSLRDSWA--NNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~-~g~~V~~l-~r~~~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      ++|+|.|++|..|+.+++.+.+ .+.++... +|+++....+...  .+..  ...+.-.+++.++++.+|++|.+..+ 
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~--~~~~~v~~~l~~~~~~~DVvIDfT~p-   77 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG--PLGVPVTDDLEELLEEADVVIDFTNP-   77 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS--T-SSBEBS-HHHHTTH-SEEEEES-H-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC--CcccccchhHHHhcccCCEEEEcCCh-
Confidence            4899999999999999999999 57776554 4544221111000  0000  00111124577888889999997643 


Q ss_pred             CCCccceehhhHHHHHHHHHHHHcCCC
Q 029125          133 GSNSYMYKINGTANINAIRAASEKGVK  159 (198)
Q Consensus       133 ~~~~~~~~~n~~~~~~~~~a~~~~~~~  159 (198)
                                 ......++.+.++++.
T Consensus        78 -----------~~~~~~~~~~~~~g~~   93 (124)
T PF01113_consen   78 -----------DAVYDNLEYALKHGVP   93 (124)
T ss_dssp             -----------HHHHHHHHHHHHHT-E
T ss_pred             -----------HHhHHHHHHHHhCCCC
Confidence                       4445667888888763

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.48  E-value=0.0037  Score=51.05  Aligned_cols=101  Identities=16%  Similarity=0.199  Sum_probs=69.6

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCccc--------ccCC--CCeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           58 KLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR--------DSWA--NNVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~--------~~~~--~~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      ||.|.|+ |.+|..++..|+.++.  ++++++..++....        ....  .++.+..+|       .+.+++.|+|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDiv   72 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADII   72 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCEE
Confidence            5889998 9999999999998874  89999987543211        0011  134444333       3567899999


Q ss_pred             EEccccCCCC------ccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          126 ISCVGGFGSN------SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       126 i~~ag~~~~~------~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      |.+||....+      .+.+..|..-...+++...+.+..-++.+-|
T Consensus        73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs  119 (307)
T cd05290          73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT  119 (307)
T ss_pred             EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            9999964322      3455677777778888888887665555444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.46  E-value=0.0044  Score=50.94  Aligned_cols=106  Identities=13%  Similarity=0.099  Sum_probs=67.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcccc---------cCCCCeEEEEccCCCHHHHHHHhcCCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRD---------SWANNVIWHQGNLLSSDSWKEALDGVT  123 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~---------~~~~~~~~~~~D~~d~~~~~~~~~~~d  123 (198)
                      .++++|.|+|+ |.+|..++..++..|. +|++++++++.....         .......+...  .|   + +.++++|
T Consensus         4 ~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~--~d---~-~~l~~aD   76 (321)
T PTZ00082          4 IKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGT--NN---Y-EDIAGSD   76 (321)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEEC--CC---H-HHhCCCC
Confidence            34579999995 9999999999999994 899999876642110         00112222210  22   2 3578999


Q ss_pred             EEEEccccCCCCc---------cceehhhHHHHHHHHHHHHcCCC-EEEEeec
Q 029125          124 AVISCVGGFGSNS---------YMYKINGTANINAIRAASEKGVK-RFVYISA  166 (198)
Q Consensus       124 ~vi~~ag~~~~~~---------~~~~~n~~~~~~~~~a~~~~~~~-~~v~~Ss  166 (198)
                      +||.++|....+.         ..+..|..-...+++.+.+.+.+ .++.+|.
T Consensus        77 iVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         77 VVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             EEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9999998643221         13344555556667777776655 5666654

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.44  E-value=0.0037  Score=51.85  Aligned_cols=69  Identities=19%  Similarity=0.330  Sum_probs=42.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC---eEEEeecC--CCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL---TVASLSRS--GRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~---~V~~l~r~--~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      ...+|.|.||||++|..|++.|.+++|   ++..+...  ..+....   .+......++. +    +.++++|+||.++
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~---~~~~~~v~~~~-~----~~~~~~D~vf~a~   77 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF---EGRDYTVEELT-E----DSFDGVDIALFSA   77 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee---cCceeEEEeCC-H----HHHcCCCEEEECC
Confidence            456899999999999999999998776   44444322  2221111   12222222332 2    2346899999888


Q ss_pred             cc
Q 029125          130 GG  131 (198)
Q Consensus       130 g~  131 (198)
                      +.
T Consensus        78 p~   79 (344)
T PLN02383         78 GG   79 (344)
T ss_pred             Cc
Confidence            63

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.43  E-value=0.0022  Score=53.08  Aligned_cols=100  Identities=11%  Similarity=0.217  Sum_probs=66.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCC------c--------------cc------ccCCC--CeE
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS------S--------------LR------DSWAN--NVI  103 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~------~--------------~~------~~~~~--~~~  103 (198)
                      ....++|+|.|+ |++|.++++.|++.|. +++++|++.-.      +              ..      ....+  .++
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            345679999997 8899999999999997 88889886410      0              00      00112  355


Q ss_pred             EEEccCCCHHHHHHHhcCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          104 WHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       104 ~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      .+..|++ .+.+.++++++|+||.+....           ..-..+-+.|.+.++. +|+.+.
T Consensus       100 ~~~~~~~-~~~~~~~~~~~DlVid~~D~~-----------~~r~~in~~~~~~~ip-~i~~~~  149 (338)
T PRK12475        100 PVVTDVT-VEELEELVKEVDLIIDATDNF-----------DTRLLINDLSQKYNIP-WIYGGC  149 (338)
T ss_pred             EEeccCC-HHHHHHHhcCCCEEEEcCCCH-----------HHHHHHHHHHHHcCCC-EEEEEe
Confidence            6666775 556788899999999977421           1112344667777764 455443

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.40  E-value=0.0017  Score=54.03  Aligned_cols=35  Identities=26%  Similarity=0.385  Sum_probs=29.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSG   90 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~   90 (198)
                      +++|+|+||+|++|+.+++.|.+... +++.+.++.
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~   38 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE   38 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence            57999999999999999999998764 888885543

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.39  E-value=0.0025  Score=52.74  Aligned_cols=100  Identities=16%  Similarity=0.263  Sum_probs=66.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCC------c-------c----c---------ccCCC--CeE
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS------S-------L----R---------DSWAN--NVI  103 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~------~-------~----~---------~~~~~--~~~  103 (198)
                      .....+|+|.|+ |++|..++..|+..|. ++.+++.+.-.      +       .    .         ....+  .++
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~   99 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE   99 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence            345679999998 9999999999999997 89999876310      0       0    0         00112  345


Q ss_pred             EEEccCCCHHHHHHHhcCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          104 WHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       104 ~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      .+..+++ .+.+.+++++.|+||.+...           ......+-++|.+.++. +|+.+.
T Consensus       100 ~~~~~~~-~~~~~~~~~~~DlVid~~Dn-----------~~~r~~ln~~~~~~~iP-~i~~~~  149 (339)
T PRK07688        100 AIVQDVT-AEELEELVTGVDLIIDATDN-----------FETRFIVNDAAQKYGIP-WIYGAC  149 (339)
T ss_pred             EEeccCC-HHHHHHHHcCCCEEEEcCCC-----------HHHHHHHHHHHHHhCCC-EEEEee
Confidence            5666664 55677888999999997542           22223456777777754 555554

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.33  E-value=0.0035  Score=53.59  Aligned_cols=104  Identities=13%  Similarity=0.089  Sum_probs=69.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHC-------CC--eEEEeecCCCCccccc---------CCCCeEEEEccCCCHHHHH
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDR-------GL--TVASLSRSGRSSLRDS---------WANNVIWHQGNLLSSDSWK  116 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~-------g~--~V~~l~r~~~~~~~~~---------~~~~~~~~~~D~~d~~~~~  116 (198)
                      +.-+|.|+|++|.+|.+++..|+..       +.  ++++++++++......         ...++.+. .+  |    .
T Consensus        99 ~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~-~~--~----y  171 (444)
T PLN00112         99 KLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG-ID--P----Y  171 (444)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe-cC--C----H
Confidence            3568999999999999999999987       64  7888888765521110         01122111 11  1    3


Q ss_pred             HHhcCCCEEEEccccCCC----CccceehhhHHHHHHHHHHHH-cCCCE-EEEee
Q 029125          117 EALDGVTAVISCVGGFGS----NSYMYKINGTANINAIRAASE-KGVKR-FVYIS  165 (198)
Q Consensus       117 ~~~~~~d~vi~~ag~~~~----~~~~~~~n~~~~~~~~~a~~~-~~~~~-~v~~S  165 (198)
                      +.+++.|+||.++|....    ..+..+.|..-...+.+...+ .+..- +|.+|
T Consensus       172 e~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs  226 (444)
T PLN00112        172 EVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVG  226 (444)
T ss_pred             HHhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence            567899999999996432    234567777777788888877 46554 44444

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.30  E-value=0.01  Score=42.25  Aligned_cols=97  Identities=19%  Similarity=0.285  Sum_probs=64.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCC------c----c-c--------------ccC-CCCeEEEEcc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS------S----L-R--------------DSW-ANNVIWHQGN  108 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~------~----~-~--------------~~~-~~~~~~~~~D  108 (198)
                      .++|+|.|+ |.+|..+++.|+..|. ++.++|.+.-.      .    . .              ... .-+++.+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            468999997 9999999999999996 78888865210      0    0 0              000 1245666667


Q ss_pred             CCCHHHHHHHhcCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          109 LLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       109 ~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      + +.+.+.+.++++|+||.+...           ......+-+.|.+.+. .+|+.+.
T Consensus        81 ~-~~~~~~~~~~~~d~vi~~~d~-----------~~~~~~l~~~~~~~~~-p~i~~~~  125 (135)
T PF00899_consen   81 I-DEENIEELLKDYDIVIDCVDS-----------LAARLLLNEICREYGI-PFIDAGV  125 (135)
T ss_dssp             C-SHHHHHHHHHTSSEEEEESSS-----------HHHHHHHHHHHHHTT--EEEEEEE
T ss_pred             c-ccccccccccCCCEEEEecCC-----------HHHHHHHHHHHHHcCC-CEEEEEe
Confidence            6 456678888999999997643           1222345667777766 5666664

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.29  E-value=0.0028  Score=54.28  Aligned_cols=73  Identities=18%  Similarity=0.085  Sum_probs=49.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc---cccCCCCeEEEEccCCCHHHHHHHhc-CCCEEEEccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL---RDSWANNVIWHQGNLLSSDSWKEALD-GVTAVISCVG  130 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~-~~d~vi~~ag  130 (198)
                      ++++|+|||+++ +|.++++.|++.|++|++.+++.....   ......++.+..++.  +..+   +. ++|.||.+.|
T Consensus         4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~--~~~~---~~~~~d~vV~s~g   77 (447)
T PRK02472          4 QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSH--PLEL---LDEDFDLMVKNPG   77 (447)
T ss_pred             CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCC--CHHH---hcCcCCEEEECCC
Confidence            468999999966 999999999999999999987643211   111123455544332  2222   33 4999999998


Q ss_pred             cCC
Q 029125          131 GFG  133 (198)
Q Consensus       131 ~~~  133 (198)
                      ...
T Consensus        78 i~~   80 (447)
T PRK02472         78 IPY   80 (447)
T ss_pred             CCC
Confidence            654

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.29  E-value=0.0014  Score=53.43  Aligned_cols=108  Identities=14%  Similarity=0.193  Sum_probs=63.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcccccC--CCC--eEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSW--ANN--VIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~~~--~~~--~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      |++|.|+|+ |.+|..++..++..|. +|++.+++++.......  ...  .......+....++ +.++++|+||.++|
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~   79 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAG   79 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCC
Confidence            579999998 9999999999998875 99999986544211000  000  00000111101123 34789999999998


Q ss_pred             cCCCCc----cceehhhHHHHHHHHHHHHcCCCE-EEEee
Q 029125          131 GFGSNS----YMYKINGTANINAIRAASEKGVKR-FVYIS  165 (198)
Q Consensus       131 ~~~~~~----~~~~~n~~~~~~~~~a~~~~~~~~-~v~~S  165 (198)
                      ......    +...-|..-...+++...+...+. +|.++
T Consensus        80 ~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         80 VPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            543221    223345555556666666555443 55554

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=97.27  E-value=0.0017  Score=54.42  Aligned_cols=68  Identities=16%  Similarity=0.161  Sum_probs=53.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      |++|+|.|+ |.+|+.++..+.+.|++|++++.+++..... ..  -..+.+|+.|.+.+.++.+.+|+|..
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~-~a--d~~~~~~~~D~~~l~~~a~~~dvit~   69 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQ-VA--DEVIVADYDDVAALRELAEQCDVITY   69 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhH-hC--ceEEecCCCCHHHHHHHHhcCCEEEe
Confidence            578999998 8999999999999999999999765442211 11  14566789999999999999998753

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.26  E-value=0.0066  Score=49.73  Aligned_cols=103  Identities=15%  Similarity=0.119  Sum_probs=66.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCcccc--------cCCCCeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRD--------SWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~~--------~~~~~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      .+||.|+|+ |.+|..++..|+..|  .++++++.+++.....        .......+...  .|   ++ .++++|+|
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~d---y~-~~~~adiv   75 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KD---YS-VTANSKVV   75 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CC---HH-HhCCCCEE
Confidence            459999996 999999999998887  4899999876431110        01111122211  12   23 37899999


Q ss_pred             EEccccCCCC----ccceehhhHHHHHHHHHHHHcCCCE-EEEee
Q 029125          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKR-FVYIS  165 (198)
Q Consensus       126 i~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~~-~v~~S  165 (198)
                      |.++|....+    ...+..|..-...+.+...+.+.+- ++.+|
T Consensus        76 vitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          76 IVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence            9999964432    3345666666677777777776553 44444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.24  E-value=0.00089  Score=54.65  Aligned_cols=35  Identities=14%  Similarity=0.200  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      +++|.|+| .|.+|..++..|+++|++|++.+|++.
T Consensus         2 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~   36 (308)
T PRK06129          2 MGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPA   36 (308)
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHH
Confidence            35899999 599999999999999999999999854

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.23  E-value=0.0011  Score=52.78  Aligned_cols=107  Identities=15%  Similarity=0.060  Sum_probs=65.9

Q ss_pred             EEEEcCCchhHHHHHHHHHHCC----CeEEEeecCCCCccccc--CCCCeEE-EEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           59 LLVLGGNGFVGSHICREALDRG----LTVASLSRSGRSSLRDS--WANNVIW-HQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        59 vlvtGatG~iG~~l~~~l~~~g----~~V~~l~r~~~~~~~~~--~~~~~~~-~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      |.|+||+|.+|..++..|+..|    .+|.++|++++......  ...-... ....+.-.+++.+.++++|+||.+++.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~   80 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV   80 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence            5799999999999999999988    69999998764421100  0000000 011121122346778899999999986


Q ss_pred             CCCC----ccceehhhHHHHHHHHHHHHcCCCE-EEEee
Q 029125          132 FGSN----SYMYKINGTANINAIRAASEKGVKR-FVYIS  165 (198)
Q Consensus       132 ~~~~----~~~~~~n~~~~~~~~~a~~~~~~~~-~v~~S  165 (198)
                      ....    ......|..-...+++.+++.+.+- ++.+|
T Consensus        81 ~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          81 GRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            4332    2234455666667777777766554 44443

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.22  E-value=0.0015  Score=53.45  Aligned_cols=101  Identities=18%  Similarity=0.200  Sum_probs=64.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCccc----cc----CCCCeEEEEccCCCHHHHHHHhcCCCEEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR----DS----WANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~----~~----~~~~~~~~~~D~~d~~~~~~~~~~~d~vi  126 (198)
                      |+|.|.|+ |.+|..++..|+.+|  .+|.++++++.....    ..    ......+...   |   + +.++++|+||
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~---d---~-~~l~~aDiVi   72 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG---D---Y-ADCKGADVVV   72 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC---C---H-HHhCCCCEEE
Confidence            47999998 999999999999999  689999997643211    00    0011222222   2   2 3478999999


Q ss_pred             EccccCCCC----ccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          127 SCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       127 ~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                      .+++.....    ......|..-...+++...+.+.+-++++-
T Consensus        73 ita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~  115 (308)
T cd05292          73 ITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVV  115 (308)
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence            999864322    223445666666677777666655444433

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.21  E-value=0.0016  Score=54.01  Aligned_cols=75  Identities=25%  Similarity=0.371  Sum_probs=50.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc----CCCEEEEc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD----GVTAVISC  128 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~d~vi~~  128 (198)
                      .+++.|||.||+|++|++.++.+...| .+|+.....+..+..+... .-.  ..|..+++-++...+    ++|+|+.|
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lG-Ad~--vvdy~~~~~~e~~kk~~~~~~DvVlD~  232 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLG-ADE--VVDYKDENVVELIKKYTGKGVDVVLDC  232 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcC-CcE--eecCCCHHHHHHHHhhcCCCccEEEEC
Confidence            356799999999999999999988889 5665555544333222222 112  237777554444444    59999999


Q ss_pred             ccc
Q 029125          129 VGG  131 (198)
Q Consensus       129 ag~  131 (198)
                      .|.
T Consensus       233 vg~  235 (347)
T KOG1198|consen  233 VGG  235 (347)
T ss_pred             CCC
Confidence            985

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=97.20  E-value=0.0013  Score=55.14  Aligned_cols=36  Identities=22%  Similarity=0.434  Sum_probs=33.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRS   89 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~   89 (198)
                      +.+++|.|.||.|.+|..++..|.+.|++|++.+|+
T Consensus        96 ~~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~  131 (374)
T PRK11199         96 PDLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD  131 (374)
T ss_pred             cccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence            456899999999999999999999999999999985

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.20  E-value=0.00097  Score=53.93  Aligned_cols=71  Identities=23%  Similarity=0.192  Sum_probs=51.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ...+++++|+|. |.+|+.+++.|...|++|++.+|++.+.... ...+...+     +.+++.+.+++.|+||++..
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~-~~~g~~~~-----~~~~l~~~l~~aDiVint~P  218 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARI-TEMGLIPF-----PLNKLEEKVAEIDIVINTIP  218 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHCCCeee-----cHHHHHHHhccCCEEEECCC
Confidence            456789999998 8899999999999999999999976432111 11122221     24456778889999999764

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.17  E-value=0.00049  Score=55.35  Aligned_cols=73  Identities=16%  Similarity=0.228  Sum_probs=49.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      ...+++++|+|+ |++|++++..|+..| .+|++++|+..+...  ...... ..+..++    +..+.+.+.|+||++.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~-~~~~~~~----~~~~~~~~~DivInaT  193 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGAL-GKAELDL----ELQEELADFDLIINAT  193 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc-cceeecc----cchhccccCCEEEECC
Confidence            356789999997 999999999999999 799999998654211  111110 0011111    2235567899999987


Q ss_pred             cc
Q 029125          130 GG  131 (198)
Q Consensus       130 g~  131 (198)
                      ..
T Consensus       194 p~  195 (278)
T PRK00258        194 SA  195 (278)
T ss_pred             cC
Confidence            53

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.17  E-value=0.014  Score=44.61  Aligned_cols=73  Identities=8%  Similarity=0.092  Sum_probs=51.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecC---CCCcc-c-----c--------------cCCC--CeEEEEc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRS---GRSSL-R-----D--------------SWAN--NVIWHQG  107 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~---~~~~~-~-----~--------------~~~~--~~~~~~~  107 (198)
                      ...++|+|.|+ |++|..++..|++.|. ++++.|++   ..... +     .              ...+  ++..+..
T Consensus        19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~   97 (200)
T TIGR02354        19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDE   97 (200)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeee
Confidence            45679999998 9999999999999998 79999887   22100 0     0              0012  3445555


Q ss_pred             cCCCHHHHHHHhcCCCEEEEc
Q 029125          108 NLLSSDSWKEALDGVTAVISC  128 (198)
Q Consensus       108 D~~d~~~~~~~~~~~d~vi~~  128 (198)
                      +++ .+.+.++++++|+||-+
T Consensus        98 ~i~-~~~~~~~~~~~DlVi~a  117 (200)
T TIGR02354        98 KIT-EENIDKFFKDADIVCEA  117 (200)
T ss_pred             eCC-HhHHHHHhcCCCEEEEC
Confidence            554 56677888899999987

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.16  E-value=0.0019  Score=52.08  Aligned_cols=56  Identities=16%  Similarity=0.275  Sum_probs=45.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ..++++|+|.|++|.+|+.++..|+++|..|+++.|+.                      .++.+.+++.|+||++.|
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t----------------------~~L~~~~~~aDIvI~AtG  211 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT----------------------QNLPELVKQADIIVGAVG  211 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc----------------------hhHHHHhccCCEEEEccC
Confidence            46789999999988899999999999999998887631                      224555678899998886

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=97.16  E-value=0.0024  Score=56.88  Aligned_cols=73  Identities=14%  Similarity=0.140  Sum_probs=59.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG  130 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag  130 (198)
                      ..+|+|.|. |-+|+.+++.|.++|+++++++.+++.-. .....+..++.+|.+|++-++++ ++++|.+|-+..
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~-~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~  473 (601)
T PRK03659        400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVN-LMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCN  473 (601)
T ss_pred             cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHH-HHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeC
Confidence            468999996 99999999999999999999998865422 12235678999999999988876 568898887664

>PRK04148 hypothetical protein; Provisional

Probab=97.16  E-value=0.00082  Score=47.97  Aligned_cols=93  Identities=12%  Similarity=0.134  Sum_probs=66.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS  134 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~  134 (198)
                      ++++|++.|. | .|..++..|.+.|++|++++.++.. .+......+.++.+|+.+++  -++-+++|.|+..=-+   
T Consensus        16 ~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~a-V~~a~~~~~~~v~dDlf~p~--~~~y~~a~liysirpp---   87 (134)
T PRK04148         16 KNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKA-VEKAKKLGLNAFVDDLFNPN--LEIYKNAKLIYSIRPP---   87 (134)
T ss_pred             cCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHH-HHHHHHhCCeEEECcCCCCC--HHHHhcCCEEEEeCCC---
Confidence            4578999997 5 8888999999999999999998664 22222346789999999876  4556788988764322   


Q ss_pred             CccceehhhHHHHHHHHHHHHcCCCEEEE
Q 029125          135 NSYMYKINGTANINAIRAASEKGVKRFVY  163 (198)
Q Consensus       135 ~~~~~~~n~~~~~~~~~a~~~~~~~~~v~  163 (198)
                       .       .-...+++.+++-+..-+|.
T Consensus        88 -~-------el~~~~~~la~~~~~~~~i~  108 (134)
T PRK04148         88 -R-------DLQPFILELAKKINVPLIIK  108 (134)
T ss_pred             -H-------HHHHHHHHHHHHcCCCEEEE
Confidence             1       22345678888877765544

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.13  E-value=0.0013  Score=58.13  Aligned_cols=73  Identities=19%  Similarity=0.208  Sum_probs=58.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG  130 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag  130 (198)
                      ..+|+|.|. |.+|+.++++|.++|++|++++.++++... ....+...+.+|.+|++.++++ ++++|.++-+.+
T Consensus       417 ~~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~-~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~  490 (558)
T PRK10669        417 CNHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDE-LRERGIRAVLGNAANEEIMQLAHLDCARWLLLTIP  490 (558)
T ss_pred             CCCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHH-HHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcC
Confidence            468999997 999999999999999999999987654222 2235789999999999988875 467898776543

>PLN02602 lactate dehydrogenase

Probab=97.09  E-value=0.012  Score=48.92  Aligned_cols=102  Identities=15%  Similarity=0.120  Sum_probs=66.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCcccc--------cCCCCeEEEEccCCCHHHHHHHhcCCCEEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRD--------SWANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~~--------~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi  126 (198)
                      ++|.|+|+ |.+|..++..|+..+  .++.+++.+++.....        .......+ .++ .|   + +.++++|+||
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i-~~~-~d---y-~~~~daDiVV  110 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKI-LAS-TD---Y-AVTAGSDLCI  110 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEE-EeC-CC---H-HHhCCCCEEE
Confidence            69999996 999999999999887  4899999876432110        01112222 211 12   2 3378999999


Q ss_pred             EccccCCCC----ccceehhhHHHHHHHHHHHHcCCC-EEEEee
Q 029125          127 SCVGGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYIS  165 (198)
Q Consensus       127 ~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~S  165 (198)
                      .+||....+    .+.+..|..-...+++...+.+.+ .++.+|
T Consensus       111 itAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        111 VTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999965322    344556666666777777777655 344444

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.07  E-value=0.0015  Score=53.07  Aligned_cols=74  Identities=26%  Similarity=0.214  Sum_probs=48.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCC-HHHHHHHhcCCCEEEEcccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLS-SDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~d~vi~~ag~  131 (198)
                      .+.+++|+||+|.+|..+++.+...|.+|+++.+++.+...........++  |..+ .+.+... .++|++|+++|.
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~d~v~~~~g~  236 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVI--DGSKFSEDVKKL-GGADVVIELVGS  236 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEE--ecHHHHHHHHhc-cCCCEEEECCCh
Confidence            467899999999999999999999999999998765332111000111222  2221 2222222 379999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.07  E-value=0.0017  Score=52.74  Aligned_cols=70  Identities=17%  Similarity=0.145  Sum_probs=51.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ..+++++|.|. |.+|+.++..|...|.+|++.+|++...... ...+..++     +.+++.+.+++.|+||++..
T Consensus       150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~-~~~G~~~~-----~~~~l~~~l~~aDiVI~t~p  219 (296)
T PRK08306        150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARI-TEMGLSPF-----HLSELAEEVGKIDIIFNTIP  219 (296)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCCeee-----cHHHHHHHhCCCCEEEECCC
Confidence            45789999997 8899999999999999999999985432111 11223322     23456777889999999864

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=97.07  E-value=0.0024  Score=48.99  Aligned_cols=72  Identities=17%  Similarity=0.274  Sum_probs=49.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccC-CCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSW-ANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ..++++|+|.|| |-+|...++.|++.|++|+++++...+...... ...+.+..-++.     ...+.+.|.||-+.+
T Consensus         7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~-----~~~l~~adlViaaT~   79 (202)
T PRK06718          7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFE-----PSDIVDAFLVIAATN   79 (202)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCC-----hhhcCCceEEEEcCC
Confidence            357889999998 999999999999999999999875433221111 123555443332     223567888887654

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=97.06  E-value=0.0046  Score=52.03  Aligned_cols=70  Identities=19%  Similarity=0.338  Sum_probs=53.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISC  128 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~  128 (198)
                      ..|+|+|+|+ |.+|..++..+.+.|++|++++.++...... ..+  .++..|..|.+.+.++.+  ++|.|+-.
T Consensus        11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~-~ad--~~~~~~~~d~~~l~~~~~~~~id~vi~~   82 (395)
T PRK09288         11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQ-VAH--RSHVIDMLDGDALRAVIEREKPDYIVPE   82 (395)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHH-hhh--heEECCCCCHHHHHHHHHHhCCCEEEEe
Confidence            5679999997 7899999999999999999999875431111 111  356678889999988887  79988864

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=97.05  E-value=0.024  Score=44.92  Aligned_cols=73  Identities=15%  Similarity=0.213  Sum_probs=57.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEccccC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGF  132 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~  132 (198)
                      +++|+|.|||+ =|+.+++.|.+.|++|++..-.....   .....+.++.+-+.|.+++.+.++  +++.||...-++
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~---~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPf   76 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGG---PADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPY   76 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCC---cccCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCcc
Confidence            57899999974 68999999999999888877654333   123467888888878999999986  799999977654

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.04  E-value=0.0041  Score=50.74  Aligned_cols=108  Identities=15%  Similarity=0.179  Sum_probs=65.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcccc---cCCCC-eEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRD---SWANN-VIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~---~~~~~-~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ++|.|.|+ |.+|..++..|+..|+ +|+++++.+......   ..... .......+.-..++.+ +++.|+||-++|.
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag~   79 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVVITAGL   79 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEEEcCCC
Confidence            58999997 9999999999999886 899999854431111   00000 0000011110112333 6789999999996


Q ss_pred             CCCC----ccceehhhHHHHHHHHHHHHcCCC-EEEEeec
Q 029125          132 FGSN----SYMYKINGTANINAIRAASEKGVK-RFVYISA  166 (198)
Q Consensus       132 ~~~~----~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~Ss  166 (198)
                      ....    ...+..|..-...+++...+.+.+ .+|.+|.
T Consensus        80 p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        80 PRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            4432    123456777777777777666544 4555553

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.03  E-value=0.0023  Score=53.60  Aligned_cols=75  Identities=17%  Similarity=0.123  Sum_probs=54.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ...+|+|+|+ |.+|...++.|...|.+|++++|++.+.......-+ ..+..+..+.+.+.+.+.+.|+||++++.
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g-~~v~~~~~~~~~l~~~l~~aDvVI~a~~~  240 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFG-GRIHTRYSNAYEIEDAVKRADLLIGAVLI  240 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcC-ceeEeccCCHHHHHHHHccCCEEEEcccc
Confidence            4567999987 999999999999999999999987543211100001 12234556778888889999999998854

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.03  E-value=0.0083  Score=45.96  Aligned_cols=100  Identities=14%  Similarity=0.228  Sum_probs=64.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCC----ccc--------------------ccCCCC--eEEE
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS----SLR--------------------DSWANN--VIWH  105 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~----~~~--------------------~~~~~~--~~~~  105 (198)
                      .....+|+|.|+ |++|.++++.|+..|. +++++|.+.-.    ..+                    ....+.  ++.+
T Consensus        18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~   96 (202)
T TIGR02356        18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL   96 (202)
T ss_pred             HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            345679999996 9999999999999996 89999876210    000                    011122  3344


Q ss_pred             EccCCCHHHHHHHhcCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          106 QGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       106 ~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      ..++. .+.+.+.+++.|+||.+....           ..-..+-+.|.+.+.. +|+.+.
T Consensus        97 ~~~i~-~~~~~~~~~~~D~Vi~~~d~~-----------~~r~~l~~~~~~~~ip-~i~~~~  144 (202)
T TIGR02356        97 KERVT-AENLELLINNVDLVLDCTDNF-----------ATRYLINDACVALGTP-LISAAV  144 (202)
T ss_pred             hhcCC-HHHHHHHHhCCCEEEECCCCH-----------HHHHHHHHHHHHcCCC-EEEEEe
Confidence            44443 456778889999999986431           1223455667777653 555543

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=97.02  E-value=0.004  Score=51.44  Aligned_cols=67  Identities=15%  Similarity=0.177  Sum_probs=53.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi  126 (198)
                      +++|.|.|| |.+|+.++..-.+-|++|++++-+++.....   -.-..+..+..|++++.++.+.+|+|=
T Consensus         1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~---va~~~i~~~~dD~~al~ela~~~DViT   67 (375)
T COG0026           1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQ---VADRVIVAAYDDPEALRELAAKCDVIT   67 (375)
T ss_pred             CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhh---cccceeecCCCCHHHHHHHHhhCCEEE
Confidence            478999998 9999999999999999999999765542211   112566778889999999999999874

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.98  E-value=0.00045  Score=55.80  Aligned_cols=70  Identities=13%  Similarity=0.175  Sum_probs=48.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcccc--cC---CCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRD--SW---ANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~--~~---~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      ...++|+|.|+ |+.|++++..|+..|. +|++++|+..+....  ..   .....+..     .+++.+.++++|+||+
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~-----~~~~~~~~~~aDiVIn  198 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA-----GSDLAAALAAADGLVH  198 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe-----ccchHhhhCCCCEEEE
Confidence            45689999997 8899999999999996 899999986542211  00   11122221     1234456678999999


Q ss_pred             cc
Q 029125          128 CV  129 (198)
Q Consensus       128 ~a  129 (198)
                      +.
T Consensus       199 aT  200 (284)
T PRK12549        199 AT  200 (284)
T ss_pred             CC
Confidence            94

>cd05295 MDH_like Malate dehydrogenase-like

Probab=96.98  E-value=0.011  Score=50.72  Aligned_cols=107  Identities=4%  Similarity=-0.084  Sum_probs=66.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHC---C----CeEEEeecCCCCccc-----------ccCCCCeEEEEccCCCHHH
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDR---G----LTVASLSRSGRSSLR-----------DSWANNVIWHQGNLLSSDS  114 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~---g----~~V~~l~r~~~~~~~-----------~~~~~~~~~~~~D~~d~~~  114 (198)
                      +.++.+|+||||+|.||.+|+-.+++-   |    ..+++++..+.....           .....++.+. .|      
T Consensus       120 ~~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~~------  192 (452)
T cd05295         120 KINPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-TD------  192 (452)
T ss_pred             CCCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-EC------
Confidence            344578999999999999999999872   3    245666663221100           0011223332 11      


Q ss_pred             HHHHhcCCCEEEEccccCCC----CccceehhhHHHHHHHHHHHHcCC--CEEEEeec
Q 029125          115 WKEALDGVTAVISCVGGFGS----NSYMYKINGTANINAIRAASEKGV--KRFVYISA  166 (198)
Q Consensus       115 ~~~~~~~~d~vi~~ag~~~~----~~~~~~~n~~~~~~~~~a~~~~~~--~~~v~~Ss  166 (198)
                      -.+.|+++|+||.++|....    .......|..-...+.++..+...  .+++.+.|
T Consensus       193 ~~ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         193 LDVAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             CHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence            24678899999999996432    234556676666677777777665  45665553

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.96  E-value=0.0014  Score=56.10  Aligned_cols=67  Identities=21%  Similarity=0.278  Sum_probs=45.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      |+|.|+||.|.+|..++..|.+.|++|++.+|++..........++.+       ..+..+.+.++|+||.+..
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~-------~~~~~e~~~~aDvVIlavp   67 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY-------ANDNIDAAKDADIVIISVP   67 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee-------ccCHHHHhccCCEEEEecC
Confidence            479999999999999999999999999999987543111100112211       1123345667888887764

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.95  E-value=0.0042  Score=50.05  Aligned_cols=58  Identities=19%  Similarity=0.309  Sum_probs=48.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      ...+++|+|+|+++.+|+.++..|..+|+.|+++.++.                      .++.+.++++|+||...|..
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t----------------------~~l~~~~~~ADIVIsAvg~p  212 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS----------------------KDMASYLKDADVIVSAVGKP  212 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc----------------------hhHHHHHhhCCEEEECCCCC
Confidence            45789999999999999999999999999999887642                      23566778899999888753

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=96.95  E-value=0.017  Score=47.74  Aligned_cols=35  Identities=20%  Similarity=0.281  Sum_probs=28.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCC---CeEEEeecC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRG---LTVASLSRS   89 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g---~~V~~l~r~   89 (198)
                      ...+|.|.||||++|+.+++.|.++.   .++..+..+
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~   40 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASE   40 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEcc
Confidence            45799999999999999999999854   366666543

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.95  E-value=0.0032  Score=51.41  Aligned_cols=37  Identities=27%  Similarity=0.334  Sum_probs=32.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      +.++|.|.|+ |.+|..++..|.+.|++|.+.+|+...
T Consensus         3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~~~   39 (308)
T PRK14619          3 QPKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRSGL   39 (308)
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence            4578999986 999999999999999999999997643

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.95  E-value=0.011  Score=49.35  Aligned_cols=71  Identities=21%  Similarity=0.336  Sum_probs=42.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHC-CCe---EEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDR-GLT---VASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~-g~~---V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      |++|.|.||||++|+.+++.++++ ...   +..+...........+.. -.....++.|.+.    +.++|++|.+++.
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~g-~~~~v~~~~~~~~----~~~~Divf~a~~~   75 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFGG-KEGTLQDAFDIDA----LKKLDIIITCQGG   75 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccCC-CcceEEecCChhH----hcCCCEEEECCCH
Confidence            468999999999999999966665 454   666554322211111111 1222234444333    3679999988863

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.95  E-value=0.0047  Score=55.23  Aligned_cols=73  Identities=15%  Similarity=0.182  Sum_probs=58.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG  130 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag  130 (198)
                      .++|+|.|. |-+|+.+++.|.++|+++++++.+++.-.. ....+..++.+|.+|++-++++ ++++|.+|-+..
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~-~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~  473 (621)
T PRK03562        400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIET-LRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID  473 (621)
T ss_pred             cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHH-HHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeC
Confidence            468999997 999999999999999999999988654221 1234678999999999988765 467898887664

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.95  E-value=0.00084  Score=44.83  Aligned_cols=67  Identities=27%  Similarity=0.267  Sum_probs=43.5

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCC---CeEEEe-ecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           58 KLLVLGGNGFVGSHICREALDRG---LTVASL-SRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g---~~V~~l-~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ||.|.| +|.+|.+|++.|++.|   ++|++. +|++++.......-++.+...|      ..+++++.|+||.+.-+
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~------~~~~~~~advvilav~p   71 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADD------NEEAAQEADVVILAVKP   71 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEE------HHHHHHHTSEEEE-S-G
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCC------hHHhhccCCEEEEEECH
Confidence            577886 5999999999999999   899966 7776542221111223333222      34556689999998754

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.95  E-value=0.0011  Score=53.42  Aligned_cols=75  Identities=15%  Similarity=0.104  Sum_probs=49.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ..+++++|.|+ |+.|++++..|++.|. +|++++|+..+...  ........+..  +...+++...+.+.|+||++..
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~--~~~~~~~~~~~~~~DiVInaTp  199 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITR--LEGDSGGLAIEKAAEVLVSTVP  199 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCccee--ccchhhhhhcccCCCEEEECCC
Confidence            35679999997 9999999999999996 79999998654221  11111111111  1112344555678999999876


Q ss_pred             c
Q 029125          131 G  131 (198)
Q Consensus       131 ~  131 (198)
                      .
T Consensus       200 ~  200 (282)
T TIGR01809       200 A  200 (282)
T ss_pred             C
Confidence            4

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.93  E-value=0.0018  Score=49.55  Aligned_cols=38  Identities=18%  Similarity=0.254  Sum_probs=33.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      ..++|+|+|+|. |.+|+++++.|.+.|++|++.+++..
T Consensus        25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~   62 (200)
T cd01075          25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEE   62 (200)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            346789999998 79999999999999999999988754

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.93  E-value=0.022  Score=44.42  Aligned_cols=98  Identities=16%  Similarity=0.218  Sum_probs=62.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCC----ccc--------------------ccCCC--CeEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS----SLR--------------------DSWAN--NVIWHQ  106 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~----~~~--------------------~~~~~--~~~~~~  106 (198)
                      ....+|+|.|+ |++|.++++.|+..|. +++++|.+.-.    ..+                    ....+  +++.+.
T Consensus        19 L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~   97 (228)
T cd00757          19 LKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN   97 (228)
T ss_pred             HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence            45679999996 9999999999999996 77777654210    000                    00112  345555


Q ss_pred             ccCCCHHHHHHHhcCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          107 GNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       107 ~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                      .++ +.+.+.+.++++|+||.+....           ..-..+-+.|.+.++ .+|+.+
T Consensus        98 ~~i-~~~~~~~~~~~~DvVi~~~d~~-----------~~r~~l~~~~~~~~i-p~i~~g  143 (228)
T cd00757          98 ERL-DAENAEELIAGYDLVLDCTDNF-----------ATRYLINDACVKLGK-PLVSGA  143 (228)
T ss_pred             cee-CHHHHHHHHhCCCEEEEcCCCH-----------HHHHHHHHHHHHcCC-CEEEEE
Confidence            555 3566778889999999987532           112345566766665 344443

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK10537 voltage-gated potassium channel; Provisional

Probab=96.92  E-value=0.005  Score=51.99  Aligned_cols=70  Identities=14%  Similarity=0.175  Sum_probs=55.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEcc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCV  129 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~a  129 (198)
                      +.+++|.|. |.+|+.++++|.++|.+|++++.+..   +.....+..++.+|.+|++.++++ +++++.||-+.
T Consensus       240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~~---~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~t  310 (393)
T PRK10537        240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLGL---EHRLPDDADLIPGDSSDSAVLKKAGAARARAILALR  310 (393)
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECchh---hhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEcC
Confidence            467999997 89999999999999999988886522   222345678999999999988875 56788888755

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.91  E-value=0.0038  Score=48.00  Aligned_cols=71  Identities=24%  Similarity=0.310  Sum_probs=53.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccccc-CCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS-WANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      .++++|+|.|| |.+|..-++.|++.|++|++++....+..... ...++.++..++.. +    .+++.+.||-+.+
T Consensus         7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~-~----dl~~~~lVi~at~   78 (205)
T TIGR01470         7 LEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDA-D----ILEGAFLVIAATD   78 (205)
T ss_pred             cCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCH-H----HhCCcEEEEECCC
Confidence            56789999998 99999999999999999999987654332211 12478888888762 2    2567888886554

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.91  E-value=0.001  Score=49.20  Aligned_cols=36  Identities=28%  Similarity=0.356  Sum_probs=30.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      |++|.+.|- |-.|..+++.|+++|++|++.+|++.+
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~   36 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEK   36 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHH
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhh
Confidence            679999997 999999999999999999999988544

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=96.91  E-value=0.01  Score=48.55  Aligned_cols=34  Identities=21%  Similarity=0.297  Sum_probs=27.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRS   89 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~   89 (198)
                      +.+|.|.||||++|..|++.|.++.+ ++..+..+
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~   36 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEA   36 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecC
Confidence            56899999999999999999998863 66555543

>PRK08223 hypothetical protein; Validated

Probab=96.89  E-value=0.024  Score=45.79  Aligned_cols=100  Identities=13%  Similarity=0.079  Sum_probs=62.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCC------ccc------------------ccCCC--CeEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS------SLR------------------DSWAN--NVIWHQ  106 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~------~~~------------------~~~~~--~~~~~~  106 (198)
                      ....+|+|.|+ |++|..++..|+..|. ++.++|.+.-.      +..                  ....+  +++.+.
T Consensus        25 L~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~  103 (287)
T PRK08223         25 LRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP  103 (287)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            45679999997 9999999999999995 78888765311      000                  00122  345555


Q ss_pred             ccCCCHHHHHHHhcCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          107 GNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       107 ~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                      ..++ ++.+.++++++|+||.+.-.+         +...-..+-++|.+.++. +|+.+
T Consensus       104 ~~l~-~~n~~~ll~~~DlVvD~~D~~---------~~~~r~~ln~~c~~~~iP-~V~~~  151 (287)
T PRK08223        104 EGIG-KENADAFLDGVDVYVDGLDFF---------EFDARRLVFAACQQRGIP-ALTAA  151 (287)
T ss_pred             cccC-ccCHHHHHhCCCEEEECCCCC---------cHHHHHHHHHHHHHcCCC-EEEEe
Confidence            5554 455677888999998655321         112223556777777753 45543

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.87  E-value=0.002  Score=51.65  Aligned_cols=70  Identities=16%  Similarity=0.298  Sum_probs=47.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCC--CCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWA--NNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~--~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      ..+++++|+|+ |++|++++..|++.|++|++++|+..+...  ....  ..+...  ++   ++  ....++|+||++.
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~--~~---~~--~~~~~~DivInat  186 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF--SM---DE--LPLHRVDLIINAT  186 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe--ch---hh--hcccCccEEEECC
Confidence            34679999998 899999999999999999999987543211  1100  112222  11   11  1235799999998


Q ss_pred             cc
Q 029125          130 GG  131 (198)
Q Consensus       130 g~  131 (198)
                      +.
T Consensus       187 p~  188 (270)
T TIGR00507       187 SA  188 (270)
T ss_pred             CC
Confidence            74

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.87  E-value=0.0044  Score=50.43  Aligned_cols=100  Identities=14%  Similarity=0.162  Sum_probs=64.8

Q ss_pred             EEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCcccc------cCC--CCeEEEEccCCCHHHHHHHhcCCCEEEEc
Q 029125           59 LLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRD------SWA--NNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (198)
Q Consensus        59 vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~~------~~~--~~~~~~~~D~~d~~~~~~~~~~~d~vi~~  128 (198)
                      |.|.|+ |.+|..++..|+..|  .++++++++++.....      ...  ....+...  .|    .+.++++|+||.+
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIit   73 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEEc
Confidence            468897 889999999999988  6899999876542110      000  11222211  12    3468899999999


Q ss_pred             cccCCC----CccceehhhHHHHHHHHHHHHcCCCE-EEEee
Q 029125          129 VGGFGS----NSYMYKINGTANINAIRAASEKGVKR-FVYIS  165 (198)
Q Consensus       129 ag~~~~----~~~~~~~n~~~~~~~~~a~~~~~~~~-~v~~S  165 (198)
                      +|....    ....+..|..-...+.+..++.+.+- ++.+|
T Consensus        74 ag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s  115 (300)
T cd00300          74 AGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVS  115 (300)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            996432    23445567777777788887776554 44444

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.86  E-value=0.012  Score=49.53  Aligned_cols=105  Identities=13%  Similarity=0.112  Sum_probs=64.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-e----EEE--e--ecCCCCcccc---------cCCCCeEEEEccCCCHHHHH
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-T----VAS--L--SRSGRSSLRD---------SWANNVIWHQGNLLSSDSWK  116 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-~----V~~--l--~r~~~~~~~~---------~~~~~~~~~~~D~~d~~~~~  116 (198)
                      +.-+|.|+|++|.+|.+++..|+..+. .    |.+  +  +++.+.....         ....++.+...   +    .
T Consensus        43 ~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~---~----y  115 (387)
T TIGR01757        43 KTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGID---P----Y  115 (387)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecC---C----H
Confidence            457999999999999999999998873 2    333  3  5544331110         00112221111   1    4


Q ss_pred             HHhcCCCEEEEccccCCCC----ccceehhhHHHHHHHHHHHHcC-CC-EEEEeec
Q 029125          117 EALDGVTAVISCVGGFGSN----SYMYKINGTANINAIRAASEKG-VK-RFVYISA  166 (198)
Q Consensus       117 ~~~~~~d~vi~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~-~~-~~v~~Ss  166 (198)
                      +.+++.|+||.+||....+    ...+..|..-...+.+...+.. .. .+|.+|.
T Consensus       116 ~~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       116 EVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            5678999999999965322    3455667777777788887743 44 4455543

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.86  E-value=0.0044  Score=50.24  Aligned_cols=38  Identities=16%  Similarity=0.255  Sum_probs=34.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      ...+|+|.|.|.+|.+|+.++..|+++|+.|+++.++.
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t  193 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRS  193 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCC
Confidence            45689999999999999999999999999999997653

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.86  E-value=0.0023  Score=54.37  Aligned_cols=73  Identities=14%  Similarity=0.221  Sum_probs=53.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      ...+++|+|.|+ |..|+.++..|...|. ++++.+|+..+...  ... ....     ....+++.+.+.+.|+||++.
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~-~~~~-----~~~~~~l~~~l~~aDiVI~aT  250 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF-RNAS-----AHYLSELPQLIKKADIIIAAV  250 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh-cCCe-----EecHHHHHHHhccCCEEEECc
Confidence            356789999998 9999999999999995 79999998654211  111 1112     223456678888999999998


Q ss_pred             ccC
Q 029125          130 GGF  132 (198)
Q Consensus       130 g~~  132 (198)
                      +..
T Consensus       251 ~a~  253 (414)
T PRK13940        251 NVL  253 (414)
T ss_pred             CCC
Confidence            753

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.84  E-value=0.0026  Score=54.19  Aligned_cols=72  Identities=19%  Similarity=0.191  Sum_probs=51.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ..+++|+|+|+ |.+|..+++.|...| .+|++++|+..+.......-+...+     +.+++.+.+.+.|+||.+.+.
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i-----~~~~l~~~l~~aDvVi~aT~s  250 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAV-----KFEDLEEYLAEADIVISSTGA  250 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEe-----eHHHHHHHHhhCCEEEECCCC
Confidence            56789999997 999999999999999 7899999986542211000011222     234567778899999998764

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.83  E-value=0.0018  Score=50.21  Aligned_cols=36  Identities=28%  Similarity=0.299  Sum_probs=32.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      |+|.|+||+|.+|..++..|++.|++|++.+|++++
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~   36 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEK   36 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHH
Confidence            479999999999999999999999999999987643

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.83  E-value=0.013  Score=47.27  Aligned_cols=105  Identities=18%  Similarity=0.172  Sum_probs=62.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCC---HHHHHHHh-cCCCEEEEcc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLS---SDSWKEAL-DGVTAVISCV  129 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d---~~~~~~~~-~~~d~vi~~a  129 (198)
                      ..+.+|+|++|+|.+|+-+.+-..-+|++|+.+.-.+++-......-+.. ...|..+   .+.+.++. +++|+.|-|.
T Consensus       149 k~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD-~~idyk~~d~~~~L~~a~P~GIDvyfeNV  227 (340)
T COG2130         149 KAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFD-AGIDYKAEDFAQALKEACPKGIDVYFENV  227 (340)
T ss_pred             CCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCc-eeeecCcccHHHHHHHHCCCCeEEEEEcC
Confidence            34679999999999999776666667999999886654411100000110 0113332   23344433 4799999999


Q ss_pred             ccCCCCccceehhhHHHHHHHHHHHHc--CCCEEEEeec-cccCCCCCC
Q 029125          130 GGFGSNSYMYKINGTANINAIRAASEK--GVKRFVYISA-ADFGVANYL  175 (198)
Q Consensus       130 g~~~~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss-~~~~~~~~~  175 (198)
                      |.                .+++++...  --.||+.+.- +.|+.+..+
T Consensus       228 Gg----------------~v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~  260 (340)
T COG2130         228 GG----------------EVLDAVLPLLNLFARIPVCGAISQYNAPELP  260 (340)
T ss_pred             Cc----------------hHHHHHHHhhccccceeeeeehhhcCCCCCC
Confidence            85                334555332  2347888877 557766444

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.82  E-value=0.0021  Score=48.17  Aligned_cols=70  Identities=19%  Similarity=0.104  Sum_probs=48.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      ...+++|.|.|. |.||+.+++.|..-|.+|+..+|........ ....+.        ..+++++++..|+|+.+....
T Consensus        33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~~~~~~--------~~~l~ell~~aDiv~~~~plt  102 (178)
T PF02826_consen   33 ELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGA-DEFGVE--------YVSLDELLAQADIVSLHLPLT  102 (178)
T ss_dssp             -STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHH-HHTTEE--------ESSHHHHHHH-SEEEE-SSSS
T ss_pred             ccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhc-ccccce--------eeehhhhcchhhhhhhhhccc
Confidence            456899999996 9999999999999999999999986543200 001111        224667788899998877643

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.80  E-value=0.046  Score=43.05  Aligned_cols=98  Identities=13%  Similarity=0.128  Sum_probs=61.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCc----cc--------------------ccCCCC--eEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS----LR--------------------DSWANN--VIWHQ  106 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~----~~--------------------~~~~~~--~~~~~  106 (198)
                      ....+|+|.|+ |++|..+++.|+..|. +++++|.+.-..    .+                    ....+.  ++.+.
T Consensus        22 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~  100 (240)
T TIGR02355        22 LKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPIN  100 (240)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence            45678999997 9999999999999995 788887653110    00                    001122  34443


Q ss_pred             ccCCCHHHHHHHhcCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          107 GNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       107 ~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                      ..+ +.+.+.+++++.|+||.+....           .....+-+.|.+.++. +|+.+
T Consensus       101 ~~i-~~~~~~~~~~~~DlVvd~~D~~-----------~~r~~ln~~~~~~~ip-~v~~~  146 (240)
T TIGR02355       101 AKL-DDAELAALIAEHDIVVDCTDNV-----------EVRNQLNRQCFAAKVP-LVSGA  146 (240)
T ss_pred             ccC-CHHHHHHHhhcCCEEEEcCCCH-----------HHHHHHHHHHHHcCCC-EEEEE
Confidence            333 3456777888999999877431           1123445667776653 44433

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.79  E-value=0.0075  Score=44.36  Aligned_cols=69  Identities=14%  Similarity=0.298  Sum_probs=45.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      ..++++|+|.|| |-+|...++.|++.|++|++++....+....  ...+.+..-.+. ++    -+++.|.||-+.
T Consensus        10 ~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp~~~~~l~~--l~~i~~~~~~~~-~~----dl~~a~lViaaT   78 (157)
T PRK06719         10 NLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSPEICKEMKE--LPYITWKQKTFS-ND----DIKDAHLIYAAT   78 (157)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCccCHHHHh--ccCcEEEecccC-hh----cCCCceEEEECC
Confidence            457899999998 9999999999999999999986433222211  123444333332 22    246778887754

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.78  E-value=0.0088  Score=51.56  Aligned_cols=74  Identities=19%  Similarity=0.137  Sum_probs=53.6

Q ss_pred             CCCCCeEEEEc----------------CCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHH
Q 029125           53 PPPSEKLLVLG----------------GNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK  116 (198)
Q Consensus        53 ~~~~~~vlvtG----------------atG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~  116 (198)
                      ...+++|+||+                .+|..|.+|++.+..+|++|+++.-...  .  ..+.++.++.+  ...+++.
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~--~--~~p~~v~~i~V--~ta~eM~  326 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD--L--ADPQGVKVIHV--ESARQML  326 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC--C--CCCCCceEEEe--cCHHHHH
Confidence            46889999997                5789999999999999999999873221  1  12456676654  4455555


Q ss_pred             HHhc---CCCEEEEccccC
Q 029125          117 EALD---GVTAVISCVGGF  132 (198)
Q Consensus       117 ~~~~---~~d~vi~~ag~~  132 (198)
                      ++++   ..|++|++|++.
T Consensus       327 ~av~~~~~~Di~I~aAAVa  345 (475)
T PRK13982        327 AAVEAALPADIAIFAAAVA  345 (475)
T ss_pred             HHHHhhCCCCEEEEecccc
Confidence            4443   379999999864

>PRK06849 hypothetical protein; Provisional

Probab=96.78  E-value=0.0061  Score=51.33  Aligned_cols=37  Identities=16%  Similarity=0.151  Sum_probs=33.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      ++|+|||||+...+|..+++.|.+.|++|++++..+.
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~   39 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKY   39 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence            5789999999999999999999999999999988753

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.77  E-value=0.016  Score=48.09  Aligned_cols=32  Identities=22%  Similarity=0.419  Sum_probs=27.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC-CeEEEeec
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG-LTVASLSR   88 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r   88 (198)
                      ++|.|+|++|++|++|++.|.+++ .++..+..
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~   33 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVA   33 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEE
Confidence            479999999999999999998876 58877743

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.77  E-value=0.0048  Score=52.51  Aligned_cols=68  Identities=16%  Similarity=0.142  Sum_probs=48.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ..+++|+|+|. |.+|+.++..|...|.+|++.++++.+...... .++.+.     +   +.++++++|+||.+.|.
T Consensus       210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~-~G~~v~-----~---l~eal~~aDVVI~aTG~  277 (425)
T PRK05476        210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAM-DGFRVM-----T---MEEAAELGDIFVTATGN  277 (425)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh-cCCEec-----C---HHHHHhCCCEEEECCCC
Confidence            46889999997 999999999999999999999987655322111 122221     1   34556788888887763

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.74  E-value=0.003  Score=53.91  Aligned_cols=72  Identities=22%  Similarity=0.320  Sum_probs=51.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ..+++|+|+|+ |.+|..+++.|...|. +|++.+|+..+.......-+.     +..+.+++.+.+.++|+||.+.+.
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~-----~~~~~~~~~~~l~~aDvVI~aT~s  252 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGG-----EAIPLDELPEALAEADIVISSTGA  252 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC-----cEeeHHHHHHHhccCCEEEECCCC
Confidence            56789999997 9999999999999996 899999976442211000011     222335566777899999998864

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.74  E-value=0.0026  Score=52.02  Aligned_cols=74  Identities=20%  Similarity=0.202  Sum_probs=51.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      ..+++|+|.|+ |.+|..+++.|...| .+|++++|++.+.......-+...     .+.+++.+.+.+.|+||.+.+..
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~-----~~~~~~~~~l~~aDvVi~at~~~  249 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNA-----VPLDELLELLNEADVVISATGAP  249 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeE-----EeHHHHHHHHhcCCEEEECCCCC
Confidence            46789999997 999999999999876 689999987654211100011122     23345677788899999998754


Q ss_pred             C
Q 029125          133 G  133 (198)
Q Consensus       133 ~  133 (198)
                      .
T Consensus       250 ~  250 (311)
T cd05213         250 H  250 (311)
T ss_pred             c
Confidence            3

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=96.71  E-value=0.01  Score=49.73  Aligned_cols=68  Identities=21%  Similarity=0.330  Sum_probs=52.5

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEcc
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCV  129 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~a  129 (198)
                      +|+|.|+ |.+|..++..+.+.|++|++++.++...... ..+  ..+.+|..|.+.+.++.+  ++|+|+-..
T Consensus         1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~-~ad--~~~~~~~~d~~~l~~~~~~~~id~v~~~~   70 (380)
T TIGR01142         1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQ-VAH--RSYVINMLDGDALRAVIEREKPDYIVPEI   70 (380)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhh-hCc--eEEEcCCCCHHHHHHHHHHhCCCEEEecc
Confidence            5899996 9999999999999999999999875432211 111  455678889999988887  799988643

This enzyme is an alternative to PurN (TIGR00639)

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.70  E-value=0.029  Score=43.36  Aligned_cols=74  Identities=15%  Similarity=0.174  Sum_probs=50.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCC---CC-ccc-------------------ccCCC--CeEEEEc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSG---RS-SLR-------------------DSWAN--NVIWHQG  107 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~---~~-~~~-------------------~~~~~--~~~~~~~  107 (198)
                      ....+|+|.|+ |++|..+++.|+..|. +++++|.+.   .. ..+                   ....+  +++.+..
T Consensus        26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~  104 (212)
T PRK08644         26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE  104 (212)
T ss_pred             HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence            45678999997 9999999999999996 688888762   10 000                   00012  3444444


Q ss_pred             cCCCHHHHHHHhcCCCEEEEcc
Q 029125          108 NLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus       108 D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      .++ .+.+.+.++++|+||.+.
T Consensus       105 ~i~-~~~~~~~~~~~DvVI~a~  125 (212)
T PRK08644        105 KID-EDNIEELFKDCDIVVEAF  125 (212)
T ss_pred             ecC-HHHHHHHHcCCCEEEECC
Confidence            554 345667788899999874

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.69  E-value=0.0038  Score=51.28  Aligned_cols=76  Identities=20%  Similarity=0.160  Sum_probs=48.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCe-EEEEccCCCH----HHHHHHh-cCCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNV-IWHQGNLLSS----DSWKEAL-DGVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~-~~~~~D~~d~----~~~~~~~-~~~d~vi~  127 (198)
                      ..+.+|+|+||+|.+|..+++.+...|.+|++++++..+.......-++ .++  |..+.    +.+.+.. .++|++|.
T Consensus       150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi--~~~~~~~~~~~i~~~~~~gvd~v~d  227 (338)
T cd08295         150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAF--NYKEEPDLDAALKRYFPNGIDIYFD  227 (338)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeE--EcCCcccHHHHHHHhCCCCcEEEEE
Confidence            3467999999999999999998888999999988765442111000122 222  22211    2233322 36899999


Q ss_pred             cccc
Q 029125          128 CVGG  131 (198)
Q Consensus       128 ~ag~  131 (198)
                      +.|.
T Consensus       228 ~~g~  231 (338)
T cd08295         228 NVGG  231 (338)
T ss_pred             CCCH
Confidence            8763

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.68  E-value=0.027  Score=47.30  Aligned_cols=98  Identities=19%  Similarity=0.216  Sum_probs=61.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCC------c------------cc------ccCCCC--eEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS------S------------LR------DSWANN--VIWHQ  106 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~------~------------~~------~~~~~~--~~~~~  106 (198)
                      ....+|+|.|+ |++|.+++..|+..|. ++++++++.-.      +            .+      ....+.  ++.+.
T Consensus       133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  211 (376)
T PRK08762        133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ  211 (376)
T ss_pred             HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            34678999987 9999999999999996 78888876200      0            00      001122  33444


Q ss_pred             ccCCCHHHHHHHhcCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          107 GNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       107 ~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                      ..+. .+.+.++++++|+||.+....           ..-..+-++|.+.++ -+|+.+
T Consensus       212 ~~~~-~~~~~~~~~~~D~Vv~~~d~~-----------~~r~~ln~~~~~~~i-p~i~~~  257 (376)
T PRK08762        212 ERVT-SDNVEALLQDVDVVVDGADNF-----------PTRYLLNDACVKLGK-PLVYGA  257 (376)
T ss_pred             ccCC-hHHHHHHHhCCCEEEECCCCH-----------HHHHHHHHHHHHcCC-CEEEEE
Confidence            4443 456777888999999987532           111234566777765 345544

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=96.68  E-value=0.0082  Score=50.18  Aligned_cols=107  Identities=17%  Similarity=0.126  Sum_probs=62.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc------cccCCCCeE-EEEcc-----CCCHHHHHHHhcCCCE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL------RDSWANNVI-WHQGN-----LLSSDSWKEALDGVTA  124 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~------~~~~~~~~~-~~~~D-----~~d~~~~~~~~~~~d~  124 (198)
                      |+|.|.| +|++|.....-|++.||+|+|++.++.+-.      .+...++++ +++-+     +.=..++.+++++.|+
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~adv   79 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDADV   79 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCCE
Confidence            5789999 499999999999999999999998764310      000111110 00000     1111235677888999


Q ss_pred             EEEccccCCCCccceehhhHHHHHHHHHHHHcCCC-EEEEeec
Q 029125          125 VISCVGGFGSNSYMYKINGTANINAIRAASEKGVK-RFVYISA  166 (198)
Q Consensus       125 vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~Ss  166 (198)
                      +|-+.|.....  .-..+......+++...+...+ ++|.+=|
T Consensus        80 ~fIavgTP~~~--dg~aDl~~V~ava~~i~~~~~~~~vvV~KS  120 (414)
T COG1004          80 VFIAVGTPPDE--DGSADLSYVEAVAKDIGEILDGKAVVVIKS  120 (414)
T ss_pred             EEEEcCCCCCC--CCCccHHHHHHHHHHHHhhcCCCeEEEEcC
Confidence            99999854333  2223444444455555444333 5555544

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.67  E-value=0.046  Score=45.64  Aligned_cols=99  Identities=17%  Similarity=0.153  Sum_probs=63.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCC----ccc--------------------ccCCC--CeEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS----SLR--------------------DSWAN--NVIWHQ  106 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~----~~~--------------------~~~~~--~~~~~~  106 (198)
                      ....+|+|.|+ |++|..+++.|+..|. +++++|.+.-.    ..+                    ....+  +++.+.
T Consensus        26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~  104 (355)
T PRK05597         26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV  104 (355)
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence            45679999998 9999999999999995 78888765310    000                    00122  345555


Q ss_pred             ccCCCHHHHHHHhcCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          107 GNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       107 ~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      ..++ .+...++++++|+||.+...+           ..-..+-++|.+.++. +|+.+.
T Consensus       105 ~~i~-~~~~~~~~~~~DvVvd~~d~~-----------~~r~~~n~~c~~~~ip-~v~~~~  151 (355)
T PRK05597        105 RRLT-WSNALDELRDADVILDGSDNF-----------DTRHLASWAAARLGIP-HVWASI  151 (355)
T ss_pred             eecC-HHHHHHHHhCCCEEEECCCCH-----------HHHHHHHHHHHHcCCC-EEEEEE
Confidence            5554 455677889999999987431           1122345677777653 555443

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.67  E-value=0.035  Score=47.59  Aligned_cols=74  Identities=18%  Similarity=0.162  Sum_probs=51.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc-cccC--CCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-RDSW--ANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~-~~~~--~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      .+++|+|+|. |..|.++++.|+++|++|.+.+..+.... ....  ..++.+..+... .    ..+.+.|.||...|.
T Consensus         4 ~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~~g~~~-~----~~~~~~d~vv~spgi   77 (445)
T PRK04308          4 QNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFYTGRLK-D----ALDNGFDILALSPGI   77 (445)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEEeCCCC-H----HHHhCCCEEEECCCC
Confidence            4578999998 68999999999999999999987654311 1111  135666655432 1    234679999999987


Q ss_pred             CCC
Q 029125          132 FGS  134 (198)
Q Consensus       132 ~~~  134 (198)
                      ..+
T Consensus        78 ~~~   80 (445)
T PRK04308         78 SER   80 (445)
T ss_pred             CCC
Confidence            543

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.66  E-value=0.0034  Score=53.00  Aligned_cols=73  Identities=19%  Similarity=0.251  Sum_probs=56.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      ...++++|.|| |-+|.-+++.|.++| .+|+++.|+..+.......-+     +++...+++...+.+.|+||.+.|..
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~-----~~~~~l~el~~~l~~~DvVissTsa~  249 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG-----AEAVALEELLEALAEADVVISSTSAP  249 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC-----CeeecHHHHHHhhhhCCEEEEecCCC
Confidence            57889999998 999999999999999 689999998665332111111     44555677888899999999988753

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.64  E-value=0.035  Score=43.86  Aligned_cols=76  Identities=18%  Similarity=0.236  Sum_probs=52.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCC--cc--c--------------------ccCCC--CeEEE
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS--SL--R--------------------DSWAN--NVIWH  105 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~--~~--~--------------------~~~~~--~~~~~  105 (198)
                      .....+|+|.|+ |++|..+++.|+..|. +++++|.+.-.  ..  +                    ....+  +++.+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~  107 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI  107 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            345789999998 9999999999999995 78888764210  00  0                    00112  34455


Q ss_pred             EccCCCHHHHHHHhcCCCEEEEccc
Q 029125          106 QGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus       106 ~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ...++ ++.+.++++++|+||.+..
T Consensus       108 ~~~i~-~~~~~~~~~~~DiVi~~~D  131 (245)
T PRK05690        108 NARLD-DDELAALIAGHDLVLDCTD  131 (245)
T ss_pred             eccCC-HHHHHHHHhcCCEEEecCC
Confidence            55554 5567778899999999874

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.64  E-value=0.046  Score=45.41  Aligned_cols=68  Identities=21%  Similarity=0.315  Sum_probs=41.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHH-CCCe---EEEeecCCCCcccccC-CCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALD-RGLT---VASLSRSGRSSLRDSW-ANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~-~g~~---V~~l~r~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ..+|.|.||||++|+.+++.|.+ ...+   +..+...........+ ...+.+...   |++.    ++++|++|.+++
T Consensus         5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~~l~v~~~---~~~~----~~~~Divf~a~~   77 (347)
T PRK06728          5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGREIIIQEA---KINS----FEGVDIAFFSAG   77 (347)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCcceEEEeC---CHHH----hcCCCEEEECCC
Confidence            46899999999999999999996 4555   5555433221111111 112222222   3332    367999998875

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.62  E-value=0.077  Score=38.06  Aligned_cols=95  Identities=19%  Similarity=0.241  Sum_probs=59.8

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCc----------cc--------------ccCCCC--eEEEEccCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS----------LR--------------DSWANN--VIWHQGNLL  110 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~----------~~--------------~~~~~~--~~~~~~D~~  110 (198)
                      +|+|.|+ |++|..+++.|+..|. ++++++.+.-..          ..              ....+.  ++.+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            5899997 9999999999999997 788887652110          00              001122  344444544


Q ss_pred             CHHHHHHHhcCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          111 SSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       111 d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      +. ...+.+++.|+||.+...           ......+.+.|++.++ .++..++
T Consensus        80 ~~-~~~~~~~~~diVi~~~d~-----------~~~~~~l~~~~~~~~i-~~i~~~~  122 (143)
T cd01483          80 ED-NLDDFLDGVDLVIDAIDN-----------IAVRRALNRACKELGI-PVIDAGG  122 (143)
T ss_pred             hh-hHHHHhcCCCEEEECCCC-----------HHHHHHHHHHHHHcCC-CEEEEcC
Confidence            33 335677889999987753           1223456677887765 3444444

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK08328 hypothetical protein; Provisional

Probab=96.61  E-value=0.064  Score=41.97  Aligned_cols=99  Identities=20%  Similarity=0.314  Sum_probs=61.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCC------c---------c-c---------ccCCC--CeEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS------S---------L-R---------DSWAN--NVIWH  105 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~------~---------~-~---------~~~~~--~~~~~  105 (198)
                      ....+|+|.|+ |++|.++++.|+..|. +++++|.+.-.      +         . .         ....+  .++.+
T Consensus        25 L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~  103 (231)
T PRK08328         25 LKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETF  103 (231)
T ss_pred             HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEE
Confidence            35678999997 9999999999999995 78888754211      0         0 0         00012  23444


Q ss_pred             EccCCCHHHHHHHhcCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          106 QGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       106 ~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      ...+ +++.+.+++++.|+||.+....           ..-..+-+.|.+.+.. +|+.+.
T Consensus       104 ~~~~-~~~~~~~~l~~~D~Vid~~d~~-----------~~r~~l~~~~~~~~ip-~i~g~~  151 (231)
T PRK08328        104 VGRL-SEENIDEVLKGVDVIVDCLDNF-----------ETRYLLDDYAHKKGIP-LVHGAV  151 (231)
T ss_pred             eccC-CHHHHHHHHhcCCEEEECCCCH-----------HHHHHHHHHHHHcCCC-EEEEee
Confidence            4444 3455677888899998876431           1122344567777653 444443

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.61  E-value=0.0077  Score=45.06  Aligned_cols=71  Identities=11%  Similarity=0.096  Sum_probs=48.4

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCC---CCcc-c-------------------ccCCC--CeEEEEccCCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGL-TVASLSRSG---RSSL-R-------------------DSWAN--NVIWHQGNLLS  111 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~---~~~~-~-------------------~~~~~--~~~~~~~D~~d  111 (198)
                      +|+|.|+ |++|..+++.|++.|. +++++|.+.   .... +                   ....+  +++.+...+. 
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~-   78 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID-   78 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC-
Confidence            5899997 9999999999999997 699988763   1100 0                   00112  3444555554 


Q ss_pred             HHHHHHHhcCCCEEEEccc
Q 029125          112 SDSWKEALDGVTAVISCVG  130 (198)
Q Consensus       112 ~~~~~~~~~~~d~vi~~ag  130 (198)
                      .+.+.+.++++|+||.+..
T Consensus        79 ~~~~~~~l~~~DlVi~~~d   97 (174)
T cd01487          79 ENNLEGLFGDCDIVVEAFD   97 (174)
T ss_pred             hhhHHHHhcCCCEEEECCC
Confidence            4557778889999998743

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.61  E-value=0.0071  Score=49.81  Aligned_cols=74  Identities=28%  Similarity=0.242  Sum_probs=46.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCC---HHHHHHHhc--CCCEEEEccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLS---SDSWKEALD--GVTAVISCVG  130 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d---~~~~~~~~~--~~d~vi~~ag  130 (198)
                      +.+|||+||+|++|...++.+...|+.+++...+..+.........-..+  |..+   .+.+.++..  ++|+||...|
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi--~y~~~~~~~~v~~~t~g~gvDvv~D~vG  220 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVI--NYREEDFVEQVRELTGGKGVDVVLDTVG  220 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEE--cCCcccHHHHHHHHcCCCCceEEEECCC
Confidence            78999999999999999998888996666665554332211111111222  2333   333444443  5999999887


Q ss_pred             c
Q 029125          131 G  131 (198)
Q Consensus       131 ~  131 (198)
                      .
T Consensus       221 ~  221 (326)
T COG0604         221 G  221 (326)
T ss_pred             H
Confidence            4

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=96.61  E-value=0.02  Score=46.73  Aligned_cols=31  Identities=23%  Similarity=0.375  Sum_probs=26.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC-CeEEEee
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG-LTVASLS   87 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~   87 (198)
                      .+|.|.|++|+.|..|++.|..+. .++..+.
T Consensus         2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~   33 (310)
T TIGR01851         2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIA   33 (310)
T ss_pred             CeEEEECCCChhHHHHHHHHhCCCCeEEEEEe
Confidence            379999999999999999999985 4666664

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.60  E-value=0.013  Score=42.26  Aligned_cols=58  Identities=21%  Similarity=0.189  Sum_probs=47.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      ..++++|+|.|.+.-+|..++..|.++|..|.++.++..                      ++++..++.|+||...|..
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~----------------------~l~~~v~~ADIVvsAtg~~   82 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI----------------------QLQSKVHDADVVVVGSPKP   82 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc----------------------CHHHHHhhCCEEEEecCCC
Confidence            567899999999999999999999999999998875421                      2455677888888888753

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.60  E-value=0.0088  Score=48.51  Aligned_cols=37  Identities=22%  Similarity=0.297  Sum_probs=33.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEee-cC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLS-RS   89 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~-r~   89 (198)
                      ...+++|+|.|.++.+|..++..|+++|+.|+++. |+
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT  192 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRT  192 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCC
Confidence            45789999999999999999999999999999994 54

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.60  E-value=0.0049  Score=49.89  Aligned_cols=76  Identities=16%  Similarity=0.261  Sum_probs=48.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCC---Cccc--ccCCC--CeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGR---SSLR--DSWAN--NVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~---~~~~--~~~~~--~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      .++++++|.|+ |+.+++++..|+..|. +|++++|+..   +...  .....  .......++.+.+.+.+.+.+.|+|
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDiv  200 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL  200 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEE
Confidence            45679999997 7779999999999985 8999999853   2110  11111  1111112232233355566789999


Q ss_pred             EEccc
Q 029125          126 ISCVG  130 (198)
Q Consensus       126 i~~ag  130 (198)
                      ||+..
T Consensus       201 INaTp  205 (288)
T PRK12749        201 TNGTK  205 (288)
T ss_pred             EECCC
Confidence            99864

>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.59  E-value=0.023  Score=48.89  Aligned_cols=75  Identities=21%  Similarity=0.162  Sum_probs=54.2

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc----ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~  133 (198)
                      +|+|.|. |..|...++.|+++|++|.+.+++......    .....++.++.+.-.+.+.+...+++.|.||...|...
T Consensus         2 ~v~viG~-G~sG~s~a~~l~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~~d~vv~s~gi~~   80 (459)
T PRK02705          2 IAHVIGL-GRSGIAAARLLKAQGWEVVVSDRNDSPELLERQQELEQEGITVKLGKPLELESFQPWLDQPDLVVVSPGIPW   80 (459)
T ss_pred             eEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCchhhHHHHHHHHHcCCEEEECCccchhhhhHHhhcCCEEEECCCCCC
Confidence            5899996 889999999999999999999987543221    11123667766554444555566778999999888643

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.57  E-value=0.0084  Score=49.40  Aligned_cols=74  Identities=22%  Similarity=0.202  Sum_probs=52.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ..+++|+|+|+ |++|..-++.+...|++|++++|++++.........-.++..  .|++....+-+.+|++|.+++
T Consensus       165 ~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~--~~~~~~~~~~~~~d~ii~tv~  238 (339)
T COG1064         165 KPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINS--SDSDALEAVKEIADAIIDTVG  238 (339)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEc--CCchhhHHhHhhCcEEEECCC
Confidence            34789999998 599998888888899999999999876422211222233332  255555555555999999987

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.55  E-value=0.0057  Score=50.22  Aligned_cols=36  Identities=17%  Similarity=0.260  Sum_probs=29.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSG   90 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~   90 (198)
                      .|++|.|.||+|+.|..|++.|..+. .++.+.+.+.
T Consensus         1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~   37 (349)
T COG0002           1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRE   37 (349)
T ss_pred             CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechh
Confidence            36799999999999999999999986 5766665443

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.53  E-value=0.021  Score=49.42  Aligned_cols=76  Identities=21%  Similarity=0.170  Sum_probs=51.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      ...+++|+|.|. |..|.++++.|++.|++|.+.+++...........++.++.++- +.+    .++++|.||...|..
T Consensus        12 ~~~~~~v~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~-~~~----~~~~~d~vV~Spgi~   85 (473)
T PRK00141         12 QELSGRVLVAGA-GVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAE-ASD----QLDSFSLVVTSPGWR   85 (473)
T ss_pred             cccCCeEEEEcc-CHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCC-chh----HhcCCCEEEeCCCCC
Confidence            346778999995 99999999999999999999997644321111122556654421 122    245789999998865


Q ss_pred             CC
Q 029125          133 GS  134 (198)
Q Consensus       133 ~~  134 (198)
                      .+
T Consensus        86 ~~   87 (473)
T PRK00141         86 PD   87 (473)
T ss_pred             CC
Confidence            43

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.52  E-value=0.017  Score=49.96  Aligned_cols=73  Identities=15%  Similarity=0.051  Sum_probs=51.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc----cccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL----RDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~----~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      .++++|+|+|+ |++|..+++.|.++|++|++++++.....    ......+++++.++-..      ...++|.||...
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv~s~   86 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT------LPEDTDLVVTSP   86 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc------ccCCCCEEEECC
Confidence            35679999997 99999999999999999999986643211    11113466766554321      345689999988


Q ss_pred             ccCC
Q 029125          130 GGFG  133 (198)
Q Consensus       130 g~~~  133 (198)
                      |...
T Consensus        87 Gi~~   90 (480)
T PRK01438         87 GWRP   90 (480)
T ss_pred             CcCC
Confidence            8643

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=96.51  E-value=0.0085  Score=38.59  Aligned_cols=34  Identities=32%  Similarity=0.670  Sum_probs=30.6

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      +|+|.|| |++|..++..|.+.|.+|+++.|++..
T Consensus         1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~~   34 (80)
T PF00070_consen    1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDRL   34 (80)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccchh
Confidence            5789997 999999999999999999999987543

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PLN02948 phosphoribosylaminoimidazole carboxylase

Probab=96.49  E-value=0.029  Score=49.78  Aligned_cols=70  Identities=21%  Similarity=0.263  Sum_probs=54.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      ..+++|+|.|+ |.+|+.++..+.+.|++|++++.+++... ....  -..+.+|..|.+.+.++.+++|+|..
T Consensus        20 ~~~k~IgIIGg-Gqlg~mla~aA~~lG~~Vi~ld~~~~apa-~~~A--D~~~v~~~~D~~~l~~~a~~~dvIt~   89 (577)
T PLN02948         20 VSETVVGVLGG-GQLGRMLCQAASQMGIKVKVLDPLEDCPA-SSVA--ARHVVGSFDDRAAVREFAKRCDVLTV   89 (577)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCch-hhhC--ceeeeCCCCCHHHHHHHHHHCCEEEE
Confidence            56789999998 89999999999999999999988654211 1111  13455788999999888888998743

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.49  E-value=0.019  Score=42.29  Aligned_cols=57  Identities=25%  Similarity=0.355  Sum_probs=41.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ...+|+|+|.|.+..+|+.++..|.++|..|+++....                      .++.+..+..|+||-.+|.
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T----------------------~~l~~~~~~ADIVVsa~G~   89 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT----------------------KNLQEITRRADIVVSAVGK   89 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS----------------------SSHHHHHTTSSEEEE-SSS
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC----------------------CcccceeeeccEEeeeecc
Confidence            46789999999999999999999999999998876542                      1245566778888887774

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PLN02928 oxidoreductase family protein

Probab=96.49  E-value=0.011  Score=49.04  Aligned_cols=78  Identities=17%  Similarity=0.127  Sum_probs=52.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccccc---CCCCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS---WANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      ...++++.|.|- |.||+.+++.|..-|.+|++.+|...+.....   ....+..+........++++++++.|+|+.+.
T Consensus       156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l  234 (347)
T PLN02928        156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC  234 (347)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence            356899999996 99999999999999999999998643211110   00111111001113456888899999999877


Q ss_pred             cc
Q 029125          130 GG  131 (198)
Q Consensus       130 g~  131 (198)
                      ..
T Consensus       235 Pl  236 (347)
T PLN02928        235 TL  236 (347)
T ss_pred             CC
Confidence            53

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.46  E-value=0.019  Score=47.04  Aligned_cols=67  Identities=19%  Similarity=0.258  Sum_probs=50.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ..+++|.|.|- |.||+.+++.|..-|.+|++.+|.....      .++..+    ...+++.+++++.|+|+.+...
T Consensus       134 l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~------~~~~~~----~~~~~l~e~l~~aDvvv~~lPl  200 (312)
T PRK15469        134 REDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSW------PGVQSF----AGREELSAFLSQTRVLINLLPN  200 (312)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCC------CCceee----cccccHHHHHhcCCEEEECCCC
Confidence            46789999996 9999999999999999999998854331      111111    1245678889999999887753

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.45  E-value=0.0055  Score=49.49  Aligned_cols=73  Identities=10%  Similarity=0.167  Sum_probs=47.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccc--ccCC---CCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR--DSWA---NNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~--~~~~---~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      .++++++|.|+ |+.|++++..|++.|. +|++++|+..+...  ....   ........+   ...+...+.++|+|||
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~---~~~~~~~~~~~divIN  200 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIEDVIAAADGVVN  200 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC---HhHHHHHHhhcCEEEE
Confidence            34689999998 9999999999999995 78999997654221  1010   110111122   2233344567999999


Q ss_pred             ccc
Q 029125          128 CVG  130 (198)
Q Consensus       128 ~ag  130 (198)
                      +..
T Consensus       201 aTp  203 (283)
T PRK14027        201 ATP  203 (283)
T ss_pred             cCC
Confidence            874

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.45  E-value=0.11  Score=41.52  Aligned_cols=97  Identities=16%  Similarity=0.227  Sum_probs=60.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCC------cc---c---------------ccCCCC--eEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRS------SL---R---------------DSWANN--VIWHQ  106 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~------~~---~---------------~~~~~~--~~~~~  106 (198)
                      ....+|+|.|+ |++|.++++.|++.| -++++++.+.-.      +.   .               ....+.  +..+.
T Consensus        28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~  106 (268)
T PRK15116         28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD  106 (268)
T ss_pred             hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence            45678999997 999999999999999 588888865211      00   0               001123  33332


Q ss_pred             ccCCCHHHHHHHhc-CCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEe
Q 029125          107 GNLLSSDSWKEALD-GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYI  164 (198)
Q Consensus       107 ~D~~d~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~  164 (198)
                       +..+++.+.+++. ++|+||.+....           ..-..+.+.|.+.+++ +|.+
T Consensus       107 -~~i~~e~~~~ll~~~~D~VIdaiD~~-----------~~k~~L~~~c~~~~ip-~I~~  152 (268)
T PRK15116        107 -DFITPDNVAEYMSAGFSYVIDAIDSV-----------RPKAALIAYCRRNKIP-LVTT  152 (268)
T ss_pred             -cccChhhHHHHhcCCCCEEEEcCCCH-----------HHHHHHHHHHHHcCCC-EEEE
Confidence             2334566666664 689998877532           2233567888887764 4433

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.44  E-value=0.0039  Score=50.96  Aligned_cols=35  Identities=26%  Similarity=0.306  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      |++|.|.|+ |.+|..++..|++.|++|.+++|++.
T Consensus         1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~   35 (325)
T PRK00094          1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPE   35 (325)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHH
Confidence            468999996 99999999999999999999998753

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=96.43  E-value=0.041  Score=44.78  Aligned_cols=97  Identities=12%  Similarity=0.136  Sum_probs=63.5

Q ss_pred             EEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCcccc---------cCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           61 VLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRD---------SWANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        61 vtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~~---------~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      |+|+ |.+|..++..|+..+.  ++.+++++.+.....         ....++.+..   .|    .+.++++|+||.++
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~----~~~~~daDivVita   72 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRS---GD----YSDCKDADLVVITA   72 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEec---CC----HHHHCCCCEEEECC
Confidence            4565 9999999999998873  799999875432110         0112233321   12    35678999999999


Q ss_pred             ccCCC----CccceehhhHHHHHHHHHHHHcCCCE-EEEee
Q 029125          130 GGFGS----NSYMYKINGTANINAIRAASEKGVKR-FVYIS  165 (198)
Q Consensus       130 g~~~~----~~~~~~~n~~~~~~~~~a~~~~~~~~-~v~~S  165 (198)
                      |....    ....+..|..-...+.+.+.+.+.+- ++.+|
T Consensus        73 g~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  113 (299)
T TIGR01771        73 GAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVAT  113 (299)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            96432    23456677777777888887776554 44444

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.42  E-value=0.0081  Score=44.26  Aligned_cols=69  Identities=20%  Similarity=0.268  Sum_probs=44.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ...+|+++|+|- |.+|+.+++.|...|.+|++...++-...+.. ..+.++.        .+.++++..|++|.+.|.
T Consensus        20 ~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~v~--------~~~~a~~~adi~vtaTG~   88 (162)
T PF00670_consen   20 MLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFEVM--------TLEEALRDADIFVTATGN   88 (162)
T ss_dssp             --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-EEE---------HHHHTTT-SEEEE-SSS
T ss_pred             eeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcEec--------CHHHHHhhCCEEEECCCC
Confidence            456889999997 99999999999999999999998865533321 2344432        245667778888877764

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.42  E-value=0.011  Score=48.19  Aligned_cols=74  Identities=24%  Similarity=0.233  Sum_probs=47.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCe-EEEEccCCC---HHH-HHHHh-cCCCEEEEc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNV-IWHQGNLLS---SDS-WKEAL-DGVTAVISC  128 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~-~~~~~D~~d---~~~-~~~~~-~~~d~vi~~  128 (198)
                      .+.+|+|+||+|.+|..+++.+...|.+|++++++.++.... ..-++ .++  |..+   ... +.... +++|++|.+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~lGa~~vi--~~~~~~~~~~~~~~~~~~gvdvv~d~  214 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKLGFDVAF--NYKTVKSLEETLKKASPDGYDCYFDN  214 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEE--eccccccHHHHHHHhCCCCeEEEEEC
Confidence            467999999999999999988888899999988765432111 11122 222  2222   222 22222 258999998


Q ss_pred             ccc
Q 029125          129 VGG  131 (198)
Q Consensus       129 ag~  131 (198)
                      .|.
T Consensus       215 ~G~  217 (325)
T TIGR02825       215 VGG  217 (325)
T ss_pred             CCH
Confidence            773

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.41  E-value=0.13  Score=39.31  Aligned_cols=100  Identities=17%  Similarity=0.241  Sum_probs=62.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCC------c----c--c--------------ccCCC--CeEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS------S----L--R--------------DSWAN--NVIW  104 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~------~----~--~--------------~~~~~--~~~~  104 (198)
                      ....+|+|.|+ |++|.++++.|+..|. +++++|.+.-.      .    .  .              ....+  +++.
T Consensus        17 L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~   95 (198)
T cd01485          17 LRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI   95 (198)
T ss_pred             HhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence            34678999998 5699999999999995 68888765211      0    0  0              00112  3444


Q ss_pred             EEccCCC-HHHHHHHhcCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          105 HQGNLLS-SDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       105 ~~~D~~d-~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      +..++.+ .+...+.++++|+||.+...           ......+-+.|.+.++ -+++.++
T Consensus        96 ~~~~~~~~~~~~~~~~~~~dvVi~~~d~-----------~~~~~~ln~~c~~~~i-p~i~~~~  146 (198)
T cd01485          96 VEEDSLSNDSNIEEYLQKFTLVIATEEN-----------YERTAKVNDVCRKHHI-PFISCAT  146 (198)
T ss_pred             EecccccchhhHHHHHhCCCEEEECCCC-----------HHHHHHHHHHHHHcCC-CEEEEEe
Confidence            4445542 34456677889998876432           1222345577877776 4566555

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.41  E-value=0.061  Score=46.09  Aligned_cols=104  Identities=13%  Similarity=0.050  Sum_probs=60.3

Q ss_pred             EEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCCCCcccee
Q 029125           61 VLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYK  140 (198)
Q Consensus        61 vtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~  140 (198)
                      |+||+|++|.++++.|...|++|+...+...+.. .....++..+..|.+..+..+++                      
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~l----------------------   99 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA-AGWGDRFGALVFDATGITDPADL----------------------   99 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCccccccc-cCcCCcccEEEEECCCCCCHHHH----------------------
Confidence            8888899999999999999999998766543211 11122333333444332222211                      


Q ss_pred             hhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          141 INGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       141 ~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                         .+...+++++.+.  ...+||++++....   .....|+.+|++.+.+++..
T Consensus       100 ---~~~~~~~~~~l~~l~~~griv~i~s~~~~---~~~~~~~~akaal~gl~rsl  148 (450)
T PRK08261        100 ---KALYEFFHPVLRSLAPCGRVVVLGRPPEA---AADPAAAAAQRALEGFTRSL  148 (450)
T ss_pred             ---HHHHHHHHHHHHhccCCCEEEEEcccccc---CCchHHHHHHHHHHHHHHHH
Confidence               1111223332221  23589999984322   12235999999999887754

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.41  E-value=0.086  Score=41.39  Aligned_cols=72  Identities=11%  Similarity=0.254  Sum_probs=47.4

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCC----ccc--------------------ccCCC--CeEEEEccCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS----SLR--------------------DSWAN--NVIWHQGNLL  110 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~----~~~--------------------~~~~~--~~~~~~~D~~  110 (198)
                      +|+|.|+ |++|.++++.|+..|. ++.++|.+.-.    ..+                    ....+  ++..+..++.
T Consensus         1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            5899996 9999999999999995 78888765210    000                    00112  3556666665


Q ss_pred             CHHHH-HHHhcCCCEEEEccc
Q 029125          111 SSDSW-KEALDGVTAVISCVG  130 (198)
Q Consensus       111 d~~~~-~~~~~~~d~vi~~ag  130 (198)
                      +.++. .+.++++|+||.+..
T Consensus        80 ~~~~~~~~f~~~~DvVi~a~D  100 (234)
T cd01484          80 PEQDFNDTFFEQFHIIVNALD  100 (234)
T ss_pred             hhhhchHHHHhCCCEEEECCC
Confidence            44333 356788999998754

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK14851 hypothetical protein; Provisional

Probab=96.40  E-value=0.08  Score=47.88  Aligned_cols=100  Identities=18%  Similarity=0.157  Sum_probs=64.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCC------CCccc------------------ccCC--CCeEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSG------RSSLR------------------DSWA--NNVIWHQ  106 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~------~~~~~------------------~~~~--~~~~~~~  106 (198)
                      ....+|+|.|. |++|..++..|+..|. +++++|.+.      +++..                  ....  -+++.+.
T Consensus        41 L~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~  119 (679)
T PRK14851         41 LAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFP  119 (679)
T ss_pred             HhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEe
Confidence            45679999996 9999999999999996 677776542      00000                  0011  2466777


Q ss_pred             ccCCCHHHHHHHhcCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          107 GNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       107 ~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                      ..++ .+.+.++++++|+||.+.-.+.         ...-..+.+.|.+.++. +|+.+
T Consensus       120 ~~i~-~~n~~~~l~~~DvVid~~D~~~---------~~~r~~l~~~c~~~~iP-~i~~g  167 (679)
T PRK14851        120 AGIN-ADNMDAFLDGVDVVLDGLDFFQ---------FEIRRTLFNMAREKGIP-VITAG  167 (679)
T ss_pred             cCCC-hHHHHHHHhCCCEEEECCCCCc---------HHHHHHHHHHHHHCCCC-EEEee
Confidence            7775 5668888999999997663211         11112456677777764 44444

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.40  E-value=0.0042  Score=45.61  Aligned_cols=71  Identities=21%  Similarity=0.318  Sum_probs=43.8

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc------c-ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL------R-DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~------~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ||.|.|| |..|.+++..|..+|++|++..|+++...      . ....+++..-. .+.=..++.+++++.|+||.+.-
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~-~i~~t~dl~~a~~~ad~IiiavP   78 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPE-NIKATTDLEEALEDADIIIIAVP   78 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEET-TEEEESSHHHHHTT-SEEEE-S-
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCc-ccccccCHHHHhCcccEEEeccc
Confidence            6899998 99999999999999999999999753200      0 00011111100 11001235677889999987664

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.40  E-value=0.089  Score=41.21  Aligned_cols=93  Identities=15%  Similarity=0.146  Sum_probs=58.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCC------ccc------------------ccCCCC--eEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS------SLR------------------DSWANN--VIWHQ  106 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~------~~~------------------~~~~~~--~~~~~  106 (198)
                      ....+|+|.|. |++|.++++.|++.|. +++++|.+.-.      +..                  ....+.  ++.+.
T Consensus         9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~   87 (231)
T cd00755           9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE   87 (231)
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence            34678999997 9999999999999995 88888765210      000                  001122  34444


Q ss_pred             ccCCCHHHHHHHhc-CCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCC
Q 029125          107 GNLLSSDSWKEALD-GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVK  159 (198)
Q Consensus       107 ~D~~d~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~  159 (198)
                      ..++ ++.+.+++. ++|+||.+...           ......+.+.|.+.+++
T Consensus        88 ~~i~-~~~~~~l~~~~~D~VvdaiD~-----------~~~k~~L~~~c~~~~ip  129 (231)
T cd00755          88 EFLT-PDNSEDLLGGDPDFVVDAIDS-----------IRAKVALIAYCRKRKIP  129 (231)
T ss_pred             eecC-HhHHHHHhcCCCCEEEEcCCC-----------HHHHHHHHHHHHHhCCC
Confidence            3443 455556554 68999887643           12234567888887754

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=96.39  E-value=0.013  Score=50.33  Aligned_cols=69  Identities=13%  Similarity=0.153  Sum_probs=49.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ...+++|+|+|. |.+|+.+++.|...|.+|++.++++....... ..++.+.        .+.+++++.|+||.+.|.
T Consensus       251 ~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~~~--------~leell~~ADIVI~atGt  319 (476)
T PTZ00075        251 MIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQVV--------TLEDVVETADIFVTATGN  319 (476)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCceec--------cHHHHHhcCCEEEECCCc
Confidence            457899999997 89999999999999999999988754432111 1233221        245667789999987763

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=96.39  E-value=0.017  Score=49.98  Aligned_cols=111  Identities=15%  Similarity=0.077  Sum_probs=61.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCccc------ccCCCCeEEE----Ec-cCCCHHHHHHHhcCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR------DSWANNVIWH----QG-NLLSSDSWKEALDGV  122 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~------~~~~~~~~~~----~~-D~~d~~~~~~~~~~~  122 (198)
                      +|+|.|.|. |++|..++..|++.|  ++|++++.++.+-..      .....++.-+    .+ .+.-..++.++++++
T Consensus         1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~a   79 (473)
T PLN02353          1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEA   79 (473)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcC
Confidence            478999986 999999999999985  789999987543111      0000111000    00 011112234567789


Q ss_pred             CEEEEccccCCCCc---cceehhhHHHHHHHHHHHHc-CCCEEEEeecc
Q 029125          123 TAVISCVGGFGSNS---YMYKINGTANINAIRAASEK-GVKRFVYISAA  167 (198)
Q Consensus       123 d~vi~~ag~~~~~~---~~~~~n~~~~~~~~~a~~~~-~~~~~v~~Ss~  167 (198)
                      |++|-|.+.....+   .....+......+++...+. ....+|.+.|+
T Consensus        80 dvi~I~V~TP~~~~g~~~~~~~Dls~v~~a~~~i~~~l~~~~lVv~~ST  128 (473)
T PLN02353         80 DIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKST  128 (473)
T ss_pred             CEEEEEeCCCCCCCCCcCCCCCcHHHHHHHHHHHHhhCCCCcEEEEeCC
Confidence            99999998433211   12234444444444444332 22356666654

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.39  E-value=0.075  Score=43.52  Aligned_cols=72  Identities=17%  Similarity=0.265  Sum_probs=48.7

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCC----ccc--------------------ccCCC--CeEEEEccCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS----SLR--------------------DSWAN--NVIWHQGNLL  110 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~----~~~--------------------~~~~~--~~~~~~~D~~  110 (198)
                      +|+|.|+ |++|.++++.|+..|. ++.++|.+.-.    ..+                    ....+  .++.+..++.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            5899997 9999999999999995 78888765311    000                    00112  3556666776


Q ss_pred             CHHHHHHHhcCCCEEEEccc
Q 029125          111 SSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus       111 d~~~~~~~~~~~d~vi~~ag  130 (198)
                      +.+...+.+++.|+||.+..
T Consensus        80 ~~~~~~~f~~~~DvVv~a~D   99 (312)
T cd01489          80 DPDFNVEFFKQFDLVFNALD   99 (312)
T ss_pred             CccchHHHHhcCCEEEECCC
Confidence            54334467788999988764

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.39  E-value=0.0076  Score=48.98  Aligned_cols=76  Identities=17%  Similarity=0.148  Sum_probs=53.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ..++.+.|+|+.| ||..-++....-|++|+++++...+..+....-+.+.+..-..|++.+.++.+-.|.++|++.
T Consensus       180 ~pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~  255 (360)
T KOG0023|consen  180 GPGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVS  255 (360)
T ss_pred             CCCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeee
Confidence            3678999999977 998766666667999999999864433322223445554444488888888776666666665

>PLN00203 glutamyl-tRNA reductase

Probab=96.37  E-value=0.0058  Score=53.38  Aligned_cols=74  Identities=16%  Similarity=0.205  Sum_probs=51.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccccc-CCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDS-WANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ..+++|+|.|+ |.+|..+++.|...|. +|++++|+..+..... ...++.+.   +...+++.+++.+.|+||.+.+.
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~---~~~~~dl~~al~~aDVVIsAT~s  339 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII---YKPLDEMLACAAEADVVFTSTSS  339 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE---eecHhhHHHHHhcCCEEEEccCC
Confidence            55789999998 9999999999999996 7999999865422110 01122221   12234556778899999998764

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=96.36  E-value=0.012  Score=47.75  Aligned_cols=100  Identities=13%  Similarity=0.170  Sum_probs=61.3

Q ss_pred             EEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccc------cc---CCCCeEEEEccCCCHHHHHHHhcCCCEEEEc
Q 029125           59 LLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR------DS---WANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (198)
Q Consensus        59 vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~------~~---~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~  128 (198)
                      |.|+|+ |.+|..++..|+..|. +|++++++++....      ..   ......+ ... .|   + +.++++|+||.+
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I-~~t-~d---~-~~l~dADiVIit   73 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKV-TGT-ND---Y-EDIAGSDVVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEE-EEc-CC---H-HHhCCCCEEEEe
Confidence            578998 9999999999998876 99999998643110      00   0011121 110 12   2 347899999999


Q ss_pred             cccCCCCc----cceehhhHHHHHHHHHHHHcCCCEE-EEee
Q 029125          129 VGGFGSNS----YMYKINGTANINAIRAASEKGVKRF-VYIS  165 (198)
Q Consensus       129 ag~~~~~~----~~~~~n~~~~~~~~~a~~~~~~~~~-v~~S  165 (198)
                      +|......    .....|..-...+++.+.+...+.+ |.+|
T Consensus        74 ~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          74 AGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             cCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            98643322    2234455555666777766665544 4554

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.36  E-value=0.08  Score=44.81  Aligned_cols=99  Identities=17%  Similarity=0.094  Sum_probs=62.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCC----ccc--------------------ccCCCC--eEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS----SLR--------------------DSWANN--VIWHQ  106 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~----~~~--------------------~~~~~~--~~~~~  106 (198)
                      ....+|+|.|+ |++|..+++.|+..|. +++++|.+.-.    ..+                    ....+.  ++.+.
T Consensus        40 L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  118 (392)
T PRK07878         40 LKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHE  118 (392)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEe
Confidence            35679999997 9999999999999996 78887754210    000                    001222  44455


Q ss_pred             ccCCCHHHHHHHhcCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          107 GNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       107 ~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      ..++ .+...++++++|+||.+...           ...-..+-++|.+.++. +|+.+.
T Consensus       119 ~~i~-~~~~~~~~~~~D~Vvd~~d~-----------~~~r~~ln~~~~~~~~p-~v~~~~  165 (392)
T PRK07878        119 FRLD-PSNAVELFSQYDLILDGTDN-----------FATRYLVNDAAVLAGKP-YVWGSI  165 (392)
T ss_pred             ccCC-hhHHHHHHhcCCEEEECCCC-----------HHHHHHHHHHHHHcCCC-EEEEEe
Confidence            5554 44567788899999987642           12222345667776653 555443

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.35  E-value=0.014  Score=47.38  Aligned_cols=75  Identities=28%  Similarity=0.219  Sum_probs=49.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHH---Hh--cCCCEEEEcc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE---AL--DGVTAVISCV  129 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~---~~--~~~d~vi~~a  129 (198)
                      .+.+++|+|+++.+|..+++.+...|++|++++++..+..... ..+.. ...|..+.+....   ..  +++|.+++++
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~  243 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-ELGAD-YVIDYRKEDFVREVRELTGKRGVDVVVEHV  243 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCC-eEEecCChHHHHHHHHHhCCCCCcEEEECC
Confidence            4678999999999999999999999999999887654311110 01111 1234444433333   22  2589999998


Q ss_pred             cc
Q 029125          130 GG  131 (198)
Q Consensus       130 g~  131 (198)
                      |.
T Consensus       244 g~  245 (342)
T cd08266         244 GA  245 (342)
T ss_pred             cH
Confidence            74

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=96.31  E-value=0.027  Score=46.86  Aligned_cols=75  Identities=20%  Similarity=0.129  Sum_probs=48.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      .+.+|+|.|+ |.+|..+++.+...|.+|++++.+..+.......-++..+ .|..+.+.+.+...++|++|.+.|.
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~v-i~~~~~~~~~~~~~~~D~vid~~g~  257 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSF-LVSTDPEKMKAAIGTMDYIIDTVSA  257 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEE-EcCCCHHHHHhhcCCCCEEEECCCC
Confidence            4678999775 9999999998888899998887664432211111122221 1334445566655678999998873

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=96.29  E-value=0.089  Score=41.69  Aligned_cols=74  Identities=26%  Similarity=0.331  Sum_probs=53.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC-cccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEccccC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS-SLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGF  132 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~  132 (198)
                      |+|+|.|||+ =|+.|+..|.++|+ |++..-..-. .........+.+..+-+.|.+++.+.++  +++.||...-++
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHPf   77 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHPF   77 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCch
Confidence            6899999975 68899999999998 5544433221 1111122456788888889999999985  799999977654

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein

Probab=96.26  E-value=0.023  Score=47.13  Aligned_cols=65  Identities=18%  Similarity=0.255  Sum_probs=50.3

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEE
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi  126 (198)
                      +|+|.|+ |.+|..++..+.+.|++|++++.++..... ...+  ..+.+|..|.+.+.++.+.+|+|.
T Consensus         1 ~igiiG~-gql~~~l~~aa~~lG~~v~~~d~~~~~p~~-~~ad--~~~~~~~~d~~~i~~~a~~~dvit   65 (352)
T TIGR01161         1 TVGILGG-GQLGRMLALAARPLGIKVHVLDPDANSPAV-QVAD--HVVLAPFFDPAAIRELAESCDVIT   65 (352)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCEEEEECCCCCCChh-HhCc--eeEeCCCCCHHHHHHHHhhCCEEE
Confidence            4789998 899999999999999999999886543211 1111  344678899999999998888764

Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.25  E-value=0.0035  Score=50.47  Aligned_cols=100  Identities=14%  Similarity=0.212  Sum_probs=61.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCccc--ccCCCCe-EEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLR--DSWANNV-IWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~--~~~~~~~-~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ++++++|.|| |+.+++++..|++.| .+|+++.|+.++..+  ..+.... .....++.+.+...    ..|+|||+..
T Consensus       125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~----~~dliINaTp  199 (283)
T COG0169         125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE----EADLLINATP  199 (283)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc----ccCEEEECCC
Confidence            5689999998 999999999999999 589999998765322  1111111 11111222222111    6899999875


Q ss_pred             cCCCC---------------ccceehhhHH-HHHHHHHHHHcCCC
Q 029125          131 GFGSN---------------SYMYKINGTA-NINAIRAASEKGVK  159 (198)
Q Consensus       131 ~~~~~---------------~~~~~~n~~~-~~~~~~a~~~~~~~  159 (198)
                      ..-..               .-.+++++.- ...+++.|++.|.+
T Consensus       200 ~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~  244 (283)
T COG0169         200 VGMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARAQGAK  244 (283)
T ss_pred             CCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHHcCCe
Confidence            32111               1123444442 23678889888875

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.25  E-value=0.037  Score=45.49  Aligned_cols=74  Identities=14%  Similarity=0.157  Sum_probs=47.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--c--------cCCCCeE--EEEccCCCHHHHHHHhcCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D--------SWANNVI--WHQGNLLSSDSWKEALDGVT  123 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~--------~~~~~~~--~~~~D~~d~~~~~~~~~~~d  123 (198)
                      .++|.|.|+ |-+|..++..|+..|++|++.++++.....  .        ....+..  .....+.-..++.++++++|
T Consensus         7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD   85 (321)
T PRK07066          7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD   85 (321)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence            468999997 999999999999999999999987542110  0        0000000  00001111223567788999


Q ss_pred             EEEEccc
Q 029125          124 AVISCVG  130 (198)
Q Consensus       124 ~vi~~ag  130 (198)
                      .||-+.-
T Consensus        86 lViEavp   92 (321)
T PRK07066         86 FIQESAP   92 (321)
T ss_pred             EEEECCc
Confidence            9999764

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.24  E-value=0.042  Score=45.08  Aligned_cols=25  Identities=28%  Similarity=0.363  Sum_probs=22.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG   80 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g   80 (198)
                      +++|.|.||||.+|+.+++.|.++.
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~   25 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERH   25 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcC
Confidence            4689999999999999999999965

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.24  E-value=0.017  Score=49.13  Aligned_cols=68  Identities=16%  Similarity=0.124  Sum_probs=48.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ..+++|+|.|+ |.+|..++..+...|.+|+++++++.+.... ...++..+     +.   .++++++|+||.+.|.
T Consensus       200 l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A-~~~G~~~~-----~~---~e~v~~aDVVI~atG~  267 (413)
T cd00401         200 IAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQA-AMEGYEVM-----TM---EEAVKEGDIFVTTTGN  267 (413)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHH-HhcCCEEc-----cH---HHHHcCCCEEEECCCC
Confidence            46789999997 9999999999999999999998876542221 11233322     11   3456778999988763

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=96.24  E-value=0.022  Score=46.61  Aligned_cols=74  Identities=23%  Similarity=0.270  Sum_probs=49.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc-cCCCCeEEEE-----ccCCCHHHHHHHhcCCCEEEEcc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-SWANNVIWHQ-----GNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~-~~~~~~~~~~-----~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      +++|.|.|+ |.=|.+|+..|.++|++|.+..|+++-..+- ....+..++.     -++.-..++.+++++.|+|+...
T Consensus         1 ~~kI~ViGa-GswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~av   79 (329)
T COG0240           1 MMKIAVIGA-GSWGTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAV   79 (329)
T ss_pred             CceEEEEcC-ChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEEC
Confidence            468999998 8899999999999999999999975431110 0011222332     12222345778888899888755


Q ss_pred             c
Q 029125          130 G  130 (198)
Q Consensus       130 g  130 (198)
                      -
T Consensus        80 P   80 (329)
T COG0240          80 P   80 (329)
T ss_pred             C
Confidence            3

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=96.24  E-value=0.047  Score=43.29  Aligned_cols=36  Identities=28%  Similarity=0.491  Sum_probs=28.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC-CeEE-EeecCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG-LTVA-SLSRSGR   91 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g-~~V~-~l~r~~~   91 (198)
                      +++|+|.|++|-.|+.+++.+.+.. .++. +++|..+
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~   39 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGS   39 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCc
Confidence            6789999999999999999999875 5554 4455443

>PLN02256 arogenate dehydrogenase

Probab=96.22  E-value=0.013  Score=47.72  Aligned_cols=68  Identities=22%  Similarity=0.323  Sum_probs=45.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHh-cCCCEEEEccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL-DGVTAVISCVG  130 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~d~vi~~ag  130 (198)
                      ...+++|.|.|. |.+|..++..|.+.|++|++.+++.......  ..++..    ..+.+   +++ .++|+||.+.-
T Consensus        33 ~~~~~kI~IIG~-G~mG~slA~~L~~~G~~V~~~d~~~~~~~a~--~~gv~~----~~~~~---e~~~~~aDvVilavp  101 (304)
T PLN02256         33 KSRKLKIGIVGF-GNFGQFLAKTFVKQGHTVLATSRSDYSDIAA--ELGVSF----FRDPD---DFCEEHPDVVLLCTS  101 (304)
T ss_pred             cCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECccHHHHHH--HcCCee----eCCHH---HHhhCCCCEEEEecC
Confidence            345679999995 9999999999999999999999875321111  112221    22333   333 36898888764

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.20  E-value=0.0095  Score=48.89  Aligned_cols=75  Identities=19%  Similarity=0.157  Sum_probs=46.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcccccCCCCe-EEEEccCCC-HHHHHHHh-cCCCEEEEcccc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNV-IWHQGNLLS-SDSWKEAL-DGVTAVISCVGG  131 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~~~~~~~-~~~~~D~~d-~~~~~~~~-~~~d~vi~~ag~  131 (198)
                      .+|+|+||+|.+|..+++.+...|. +|+++++++++.......-++ .++..+-.+ .+.+.++. +++|++|.+.|.
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~  234 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGG  234 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCc
Confidence            7999999999999999988888898 799998765432111000112 222211112 23333332 368999998763

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK14852 hypothetical protein; Provisional

Probab=96.19  E-value=0.055  Score=50.47  Aligned_cols=101  Identities=12%  Similarity=0.105  Sum_probs=64.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCC------Cccc------------------ccCCC--CeEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGR------SSLR------------------DSWAN--NVIWHQ  106 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~------~~~~------------------~~~~~--~~~~~~  106 (198)
                      ....+|+|.|. |++|..+++.|+..|. +++++|.+.-      .+..                  ....+  +++.+.
T Consensus       330 L~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~  408 (989)
T PRK14852        330 LLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFP  408 (989)
T ss_pred             HhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEe
Confidence            34679999996 9999999999999996 6777765421      0000                  00123  455565


Q ss_pred             ccCCCHHHHHHHhcCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          107 GNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       107 ~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      ..+ +++.+.++++++|+||.+.-.+.       .  .....+.+.|.+.++. +|+.++
T Consensus       409 ~~I-~~en~~~fl~~~DiVVDa~D~~~-------~--~~rr~l~~~c~~~~IP-~I~ag~  457 (989)
T PRK14852        409 EGV-AAETIDAFLKDVDLLVDGIDFFA-------L--DIRRRLFNRALELGIP-VITAGP  457 (989)
T ss_pred             cCC-CHHHHHHHhhCCCEEEECCCCcc-------H--HHHHHHHHHHHHcCCC-EEEeec
Confidence            555 46678889999999998664321       1  1123456667777764 444444

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.19  E-value=0.07  Score=45.34  Aligned_cols=35  Identities=26%  Similarity=0.369  Sum_probs=31.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      |+|.|.|. |.+|..++..|++.|++|++.++++.+
T Consensus         1 mkI~vIGl-G~~G~~lA~~La~~G~~V~~~d~~~~~   35 (411)
T TIGR03026         1 MKIAVIGL-GYVGLPLAALLADLGHEVTGVDIDQEK   35 (411)
T ss_pred             CEEEEECC-CchhHHHHHHHHhcCCeEEEEECCHHH
Confidence            47899986 999999999999999999999987643

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=96.18  E-value=0.047  Score=46.52  Aligned_cols=36  Identities=19%  Similarity=0.285  Sum_probs=32.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      +++|.|.|. |++|..++..|++.|++|++.++++.+
T Consensus         3 ~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~   38 (415)
T PRK11064          3 FETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHA   38 (415)
T ss_pred             ccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHH
Confidence            478999986 999999999999999999999997654

>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional

Probab=96.18  E-value=0.038  Score=47.67  Aligned_cols=74  Identities=14%  Similarity=0.155  Sum_probs=50.8

Q ss_pred             CCCCeEEEEcCCchhHHH-HHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           54 PPSEKLLVLGGNGFVGSH-ICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~-l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      .++++|+|.|. |..|.. +++.|.++|++|++.+.+...........++.++.+.  ++    +.++++|.||...|..
T Consensus         5 ~~~~~v~viG~-G~sG~s~~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~--~~----~~~~~~d~vv~spgi~   77 (461)
T PRK00421          5 RRIKRIHFVGI-GGIGMSGLAEVLLNLGYKVSGSDLKESAVTQRLLELGAIIFIGH--DA----ENIKDADVVVYSSAIP   77 (461)
T ss_pred             CCCCEEEEEEE-chhhHHHHHHHHHhCCCeEEEECCCCChHHHHHHHCCCEEeCCC--CH----HHCCCCCEEEECCCCC
Confidence            35678999998 789999 7999999999999999765432211112245554322  22    2346799999999875


Q ss_pred             CC
Q 029125          133 GS  134 (198)
Q Consensus       133 ~~  134 (198)
                      .+
T Consensus        78 ~~   79 (461)
T PRK00421         78 DD   79 (461)
T ss_pred             CC
Confidence            43

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.17  E-value=0.016  Score=47.75  Aligned_cols=73  Identities=15%  Similarity=0.062  Sum_probs=45.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHh---cCCCEEEEccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL---DGVTAVISCVG  130 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~---~~~d~vi~~ag  130 (198)
                      .+.+|+|+|+ |.+|...++.+...|. +|+++++++.+..... .-+...+ .|..+. ++.+..   .++|++|.+.|
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~lGa~~v-i~~~~~-~~~~~~~~~g~~D~vid~~G  244 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EMGADKL-VNPQND-DLDHYKAEKGYFDVSFEVSG  244 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-HcCCcEE-ecCCcc-cHHHHhccCCCCCEEEECCC
Confidence            4679999986 9999999988888897 6888888754421111 1122211 233332 233322   24899999988


Q ss_pred             c
Q 029125          131 G  131 (198)
Q Consensus       131 ~  131 (198)
                      .
T Consensus       245 ~  245 (343)
T PRK09880        245 H  245 (343)
T ss_pred             C
Confidence            4

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=96.16  E-value=0.027  Score=45.43  Aligned_cols=101  Identities=18%  Similarity=0.132  Sum_probs=58.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCC-------------CCeEEEEccCCCHHHHHHHhcCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWA-------------NNVIWHQGNLLSSDSWKEALDGVT  123 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~~d  123 (198)
                      ++|.++| .|-.|..++..|+++|++|++.+|++.+..+....             ....++..=+.|.+++++++-+.+
T Consensus         1 ~kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~   79 (286)
T COG2084           1 MKIAFIG-LGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGEN   79 (286)
T ss_pred             CeEEEEc-CchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCcc
Confidence            3678888 49999999999999999999999997662221111             123344444555555555554433


Q ss_pred             EEEEccccCCCCccceehhhHHHHHHHHHHHHcCC
Q 029125          124 AVISCVGGFGSNSYMYKINGTANINAIRAASEKGV  158 (198)
Q Consensus       124 ~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~  158 (198)
                      .+...+.+..-+-+.-.+....++.+.+.+++.|.
T Consensus        80 g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~  114 (286)
T COG2084          80 GLLEGLKPGAIVIDMSTISPETARELAAALAAKGL  114 (286)
T ss_pred             chhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCC
Confidence            33322211111111112334555666777776664

>PRK12409 D-amino acid dehydrogenase small subunit; Provisional

Probab=96.16  E-value=0.0097  Score=50.27  Aligned_cols=34  Identities=24%  Similarity=0.433  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      |.+|+|+|| |.+|..++.+|+++|++|.+++|..
T Consensus         1 ~~~vvIIGa-G~~G~~~A~~La~~g~~V~vle~~~   34 (410)
T PRK12409          1 MSHIAVIGA-GITGVTTAYALAQRGYQVTVFDRHR   34 (410)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCC
Confidence            468999998 9999999999999999999999875

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.15  E-value=0.0064  Score=52.68  Aligned_cols=71  Identities=15%  Similarity=0.170  Sum_probs=46.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ..+++++|+|+ |++|++++..|.+.|++|++.+|+..+.......-+...  .++   +++.. +.++|+||++...
T Consensus       330 ~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~~--~~~---~~~~~-l~~~DiVInatP~  400 (477)
T PRK09310        330 LNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGKA--FPL---ESLPE-LHRIDIIINCLPP  400 (477)
T ss_pred             cCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccce--ech---hHhcc-cCCCCEEEEcCCC
Confidence            45679999996 899999999999999999999887543211000001111  111   22222 4679999998753

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.14  E-value=0.0072  Score=49.70  Aligned_cols=35  Identities=26%  Similarity=0.392  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      +++|.|.|+ |-+|..++..|++.|++|++++|++.
T Consensus         4 ~m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~   38 (328)
T PRK14618          4 GMRVAVLGA-GAWGTALAVLAASKGVPVRLWARRPE   38 (328)
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence            568999986 99999999999999999999999754

>PRK07877 hypothetical protein; Provisional

Probab=96.14  E-value=0.047  Score=49.58  Aligned_cols=97  Identities=16%  Similarity=0.155  Sum_probs=64.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCC------Cccc-----------------ccCCC--CeEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGR------SSLR-----------------DSWAN--NVIWHQ  106 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~------~~~~-----------------~~~~~--~~~~~~  106 (198)
                      ....+|+|.|. | +|..++..|+..|.  ++++++.+.=      +...                 ....+  +++.+.
T Consensus       105 L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~  182 (722)
T PRK07877        105 LGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFT  182 (722)
T ss_pred             HhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEe
Confidence            34679999999 7 99999999999994  8888876521      0000                 00112  466666


Q ss_pred             ccCCCHHHHHHHhcCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          107 GNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       107 ~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                      ..++ ++.+.++++++|+||.|.-.+           ..-..+-++|.+.++. +|+.+
T Consensus       183 ~~i~-~~n~~~~l~~~DlVvD~~D~~-----------~~R~~ln~~a~~~~iP-~i~~~  228 (722)
T PRK07877        183 DGLT-EDNVDAFLDGLDVVVEECDSL-----------DVKVLLREAARARRIP-VLMAT  228 (722)
T ss_pred             ccCC-HHHHHHHhcCCCEEEECCCCH-----------HHHHHHHHHHHHcCCC-EEEEc
Confidence            6665 777899999999999987431           2222445677777664 44444

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.10  E-value=0.019  Score=50.06  Aligned_cols=77  Identities=17%  Similarity=0.164  Sum_probs=51.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCH-------------H---HHHHH
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSS-------------D---SWKEA  118 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~-------------~---~~~~~  118 (198)
                      .+.+|+|+|+ |.+|...+..+...|.+|+++++++.+..... .-+.+++..|..+.             +   ...+.
T Consensus       164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~  241 (509)
T PRK09424        164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL  241 (509)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence            4679999998 99999999999999999999999865532211 12344443333211             1   11122


Q ss_pred             ----hcCCCEEEEccccCC
Q 029125          119 ----LDGVTAVISCVGGFG  133 (198)
Q Consensus       119 ----~~~~d~vi~~ag~~~  133 (198)
                          .+++|+||.+++...
T Consensus       242 ~~~~~~gaDVVIetag~pg  260 (509)
T PRK09424        242 FAEQAKEVDIIITTALIPG  260 (509)
T ss_pred             HHhccCCCCEEEECCCCCc
Confidence                357999999998643

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.09  E-value=0.12  Score=43.41  Aligned_cols=99  Identities=19%  Similarity=0.258  Sum_probs=63.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCC----ccc--------------------ccCCC--CeEEE
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS----SLR--------------------DSWAN--NVIWH  105 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~----~~~--------------------~~~~~--~~~~~  105 (198)
                      .....+|+|.|+ |++|..++..|+..|. ++++++.+.-.    ..+                    ....+  +++.+
T Consensus        38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~  116 (370)
T PRK05600         38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNAL  116 (370)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEe
Confidence            345678999997 9999999999999995 88888875210    000                    00112  34555


Q ss_pred             EccCCCHHHHHHHhcCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          106 QGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       106 ~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                      ...++ .+.+.++++++|+||.+....           ..-..+-++|.+.++. +|+.+
T Consensus       117 ~~~i~-~~~~~~~~~~~DlVid~~Dn~-----------~~r~~in~~~~~~~iP-~v~~~  163 (370)
T PRK05600        117 RERLT-AENAVELLNGVDLVLDGSDSF-----------ATKFLVADAAEITGTP-LVWGT  163 (370)
T ss_pred             eeecC-HHHHHHHHhCCCEEEECCCCH-----------HHHHHHHHHHHHcCCC-EEEEE
Confidence            55554 556778889999999887531           2222344666666653 44443

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=96.09  E-value=0.14  Score=40.35  Aligned_cols=74  Identities=15%  Similarity=0.235  Sum_probs=48.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEccccC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGF  132 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~  132 (198)
                      +++|+|.|||+ =++.|+++|...+..+++.+-........  ........+-..+.+.+.+.++  ++|.||...-++
T Consensus         2 ~~~ilvlGGT~-Dar~la~~L~~~~~~~~~ss~t~~g~~l~--~~~~~~~~~G~l~~e~l~~~l~e~~i~llIDATHPy   77 (257)
T COG2099           2 MMRILLLGGTS-DARALAKKLAAAPVDIILSSLTGYGAKLA--EQIGPVRVGGFLGAEGLAAFLREEGIDLLIDATHPY   77 (257)
T ss_pred             CceEEEEeccH-HHHHHHHHhhccCccEEEEEcccccccch--hccCCeeecCcCCHHHHHHHHHHcCCCEEEECCChH
Confidence            57899999986 47889999999984444443322111111  1111245566677899999886  689999876543

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.08  E-value=0.027  Score=45.73  Aligned_cols=75  Identities=27%  Similarity=0.299  Sum_probs=48.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCe-EEEEccCCCH---HHHHHHh-cCCCEEEEc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNV-IWHQGNLLSS---DSWKEAL-DGVTAVISC  128 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~-~~~~~D~~d~---~~~~~~~-~~~d~vi~~  128 (198)
                      ..+.+|+|+||+|.+|..+++.+...|.+|++++++..+..... .-++ .++  |..+.   +.+.+.. .++|++|.+
T Consensus       142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~-~~Ga~~vi--~~~~~~~~~~v~~~~~~gvd~vld~  218 (329)
T cd08294         142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK-ELGFDAVF--NYKTVSLEEALKEAAPDGIDCYFDN  218 (329)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEE--eCCCccHHHHHHHHCCCCcEEEEEC
Confidence            34679999999999999999988889999998887654321110 1122 222  33322   2233322 358999998


Q ss_pred             ccc
Q 029125          129 VGG  131 (198)
Q Consensus       129 ag~  131 (198)
                      .|.
T Consensus       219 ~g~  221 (329)
T cd08294         219 VGG  221 (329)
T ss_pred             CCH
Confidence            763

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.08  E-value=0.01  Score=45.46  Aligned_cols=36  Identities=22%  Similarity=0.291  Sum_probs=29.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      ||++.|.| +|.+|..++.+|.+.||+|++-.|+.++
T Consensus         1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~   36 (211)
T COG2085           1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPK   36 (211)
T ss_pred             CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChh
Confidence            34555555 6999999999999999999999877654

>PRK06487 glycerate dehydrogenase; Provisional

Probab=96.07  E-value=0.031  Score=45.87  Aligned_cols=63  Identities=24%  Similarity=0.164  Sum_probs=47.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ...+++|.|.|- |.||+.+++.|..-|.+|++.+|.....       ...        ..+++++++..|+|+.+.-.
T Consensus       145 ~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~~~~-------~~~--------~~~l~ell~~sDiv~l~lPl  207 (317)
T PRK06487        145 ELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPGRPA-------RPD--------RLPLDELLPQVDALTLHCPL  207 (317)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCCcc-------ccc--------ccCHHHHHHhCCEEEECCCC
Confidence            357899999996 9999999999998899999998753210       111        12477888899988876653

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.06  E-value=0.03  Score=45.15  Aligned_cols=57  Identities=21%  Similarity=0.293  Sum_probs=45.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ...+++|+|.|.++.+|+-++..|.++|..|+++....                      .++.+.++..|+||..+|.
T Consensus       155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t----------------------~~l~~~~~~ADIVV~avG~  211 (285)
T PRK14189        155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT----------------------RDLAAHTRQADIVVAAVGK  211 (285)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC----------------------CCHHHHhhhCCEEEEcCCC
Confidence            35789999999999999999999999999998764321                      1245666778888887774

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=96.06  E-value=0.092  Score=43.88  Aligned_cols=70  Identities=21%  Similarity=0.360  Sum_probs=40.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHH-HCCC---eEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           57 EKLLVLGGNGFVGSHICREAL-DRGL---TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~-~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ++|.|.||||.+|+.+++.|. ++..   +++++.-.........+ .+.....-++.+.    ..+.++|++|.++|.
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f-~~~~~~v~~~~~~----~~~~~vDivffa~g~   74 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSF-GGTTGTLQDAFDI----DALKALDIIITCQGG   74 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCC-CCCcceEEcCccc----ccccCCCEEEEcCCH
Confidence            479999999999999999999 5454   44555432211111111 1111122233222    235689999998874

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=96.05  E-value=0.051  Score=41.28  Aligned_cols=79  Identities=13%  Similarity=0.146  Sum_probs=52.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCC-HHHHHHHhcCCCEEEEcccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLS-SDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ...+|+|+|.|.+.-+|+-|+..|+++|+.|++++.+.-.....  .....--.....| +..+.+.++..|+||-..|.
T Consensus        59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~~--~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~  136 (197)
T cd01079          59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFTR--GESIRHEKHHVTDEEAMTLDCLSQSDVVITGVPS  136 (197)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCccccccc--ccccccccccccchhhHHHHHhhhCCEEEEccCC
Confidence            56899999999999999999999999999999986432110000  0000000011112 23477888899999999986


Q ss_pred             CC
Q 029125          132 FG  133 (198)
Q Consensus       132 ~~  133 (198)
                      ..
T Consensus       137 ~~  138 (197)
T cd01079         137 PN  138 (197)
T ss_pred             CC
Confidence            44

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=96.05  E-value=0.0098  Score=49.49  Aligned_cols=74  Identities=18%  Similarity=0.215  Sum_probs=59.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCcccccCCCCeEEEEccCCCHH-HHHHHhcCCCEEEEcc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSD-SWKEALDGVTAVISCV  129 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~~~~~~d~vi~~a  129 (198)
                      ++++||+.|+ ||+-+-++..|.+++ .+|++.+|...+..+.....++..+..|+.+++ .++...+..|.++...
T Consensus         1 ~~~~vlllgs-g~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~viSLl   76 (445)
T KOG0172|consen    1 TKKGVLLLGS-GFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKGINIKAVSLDVADEELALRKEVKPLDLVISLL   76 (445)
T ss_pred             CCcceEEecC-ccccchHHHHHhhcCCceEEEehhhHHHHHHHhcCCCccceEEEccchHHHHHhhhcccceeeeec
Confidence            3678999996 999999999999886 689988887655433333345889999999988 8888888999988765

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=96.04  E-value=0.049  Score=43.56  Aligned_cols=32  Identities=28%  Similarity=0.436  Sum_probs=27.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHC-CCeEEEeec
Q 029125           57 EKLLVLGGNGFVGSHICREALDR-GLTVASLSR   88 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~r   88 (198)
                      ++|.|+|++|.+|+.+++.+.+. +.+++++.-
T Consensus         2 ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d   34 (266)
T TIGR00036         2 IKVAVAGAAGRMGRELIKAALAAEGLQLVAAFE   34 (266)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            58999999999999999999874 678777543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	198
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	3e-30
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	4e-30
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	6e-28
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	8e-28
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	2e-26
1xq6_A	253	Unknown protein; structural genomics, protein stru	9e-22
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	4e-20
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	7e-20
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	1e-19
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	5e-19
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	7e-19
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	4e-17
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	5e-17
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	4e-16
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	2e-15
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	2e-15
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	9e-14
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	1e-13
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	1e-13
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	2e-13
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	3e-12
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	5e-12
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	7e-12
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	1e-11
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	2e-11
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	2e-11
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	3e-11
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	7e-11
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	1e-10
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	2e-10
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	4e-10
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	5e-10
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	9e-10
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	2e-09
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	3e-09
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	4e-09
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	6e-09
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	7e-09
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	9e-09
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	9e-09
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	7e-08
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	8e-08
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	9e-08
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	9e-08
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	1e-07
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	1e-07
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	3e-07
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	6e-07
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	1e-06
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	2e-06
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	3e-06
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	4e-06
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	7e-06
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	1e-05
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	2e-05
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	2e-05
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	2e-04
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	5e-04
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	5e-04
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	6e-04
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	8e-04
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	8e-04

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score =  109 bits (274), Expect = 3e-30
 Identities = 29/137 (21%), Positives = 45/137 (32%), Gaps = 6/137 (4%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+ + G  G  G     +A+  G  V  L R   S L            G++L +    +
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS-SRLPSEGPRPAHVVVGDVLQAADVDK 63

Query: 118 ALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA----DFGVAN 173
            + G  AVI  +G     S    +      N + A    GV + V  ++A    D     
Sbjct: 64  TVAGQDAVIVLLGTRNDLSP-TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP 122

Query: 174 YLLQGYYEGKRAAETEL 190
             LQ   +        L
Sbjct: 123 PRLQAVTDDHIRMHKVL 139

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score =  109 bits (274), Expect = 4e-30
 Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 13/144 (9%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNL-LSSDSWK 116
           K+ ++G  G VG  + +        + + +R      +    NNV     ++  + +   
Sbjct: 2   KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVE---QVPQYNNVKAVHFDVDWTPEEMA 58

Query: 117 EALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA-------DF 169
           + L G+ A+I+  G  G +  + K++    +  ++AA +  VKRF+ +S           
Sbjct: 59  KQLHGMDAIINVSGSGGKS--LLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWI 116

Query: 170 GVANYLLQGYYEGKRAAETELLTR 193
           G     L+ YY  K  A+  L   
Sbjct: 117 GAGFDALKDYYIAKHFADLYLTKE 140

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score =  103 bits (260), Expect = 6e-28
 Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 11/140 (7%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGR--SSLRDSWANNVIWHQGNLLSSDSW 115
           ++LV+G NG V  ++  E  ++G    ++ R+      LR+  A++++    NL   + +
Sbjct: 23  RVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIV--VANL--EEDF 78

Query: 116 KEALDGVTAVISCVGGFGS--NSYMYKINGTANINAIRAASEKGVKRFVYIS---AADFG 170
             A   + AV+   G            I+    I  I+ A ++G+KRF+ +S     D  
Sbjct: 79  SHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPD 138

Query: 171 VANYLLQGYYEGKRAAETEL 190
                ++ Y   KR A+ EL
Sbjct: 139 QGPMNMRHYLVAKRLADDEL 158

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score =  103 bits (259), Expect = 8e-28
 Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 2/110 (1%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K++++G +GFVGS +  EAL+RG  V ++ R            ++   + ++ S D   E
Sbjct: 6   KIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI--KIENEHLKVKKADVSSLDEVCE 63

Query: 118 ALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA 167
              G  AVIS      +N  +Y       +  I    + GV RF+ +  A
Sbjct: 64  VCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGA 113

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  101 bits (255), Expect = 2e-26
 Identities = 25/119 (21%), Positives = 37/119 (31%), Gaps = 9/119 (7%)

Query: 53  PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSS 112
           P    K  VLG  G +G H  R     G  +  + R   S ++             +L  
Sbjct: 10  PGAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPS-SQIQRLAYLEPECRVAEMLDH 68

Query: 113 DSWKEALDGVTAVISCVGGFGSNS----YMYKIN--GTANINAIRAASEKGVKRFVYIS 165
              + AL G+  VI   G + S               T       A  +  V R +Y+ 
Sbjct: 69  AGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPF--YAACLQARVPRILYVG 125

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 88.4 bits (219), Expect = 9e-22
 Identities = 29/160 (18%), Positives = 50/160 (31%), Gaps = 28/160 (17%)

Query: 57  EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
             +LV G +G  G  + ++  +         L RS +   ++          G++  +DS
Sbjct: 5   PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG--KEKIGGEADVFIGDITDADS 62

Query: 115 WKEALDGVTAVISCVGGFGSNS-------------------YMYKINGTANINAIRAASE 155
              A  G+ A++                             Y  +++     N I AA  
Sbjct: 63  INPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV 122

Query: 156 KGVKRFVYISA-----ADFGVANYLLQGYYEGKRAAETEL 190
            GVK  V + +      D  +           KR AE  L
Sbjct: 123 AGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYL 162

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 83.3 bits (206), Expect = 4e-20
 Identities = 23/143 (16%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 58  KLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK 116
            +L+LG  G +  H+  +  D+  +     +R   + +   +  N     G++L+  + K
Sbjct: 25  NVLILGAGGQIARHVINQLADKQTIKQTLFARQ-PAKIHKPYPTNSQIIMGDVLNHAALK 83

Query: 117 EALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA--------- 167
           +A+ G   V + + G   +            + I A     VKR +++ +          
Sbjct: 84  QAMQGQDIVYANLTGEDLD--------IQANSVIAAMKACDVKRLIFVLSLGIYDEVPGK 135

Query: 168 DFGVANYLLQGYYEGKRAAETEL 190
                N ++    +  R A   +
Sbjct: 136 FVEWNNAVIGEPLKPFRRAADAI 158

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 82.8 bits (204), Expect = 7e-20
 Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 6/111 (5%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+ VLG  G  GS I  EA  RG  V ++ R  +   + +                  + 
Sbjct: 2   KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQ---KAADRLGATVATLVKEPLVLTEA 58

Query: 118 ALDGVTAVISCVG-GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA 167
            LD V AV+  +   +GS      ++   ++  +             + +A
Sbjct: 59  DLDSVDAVVDALSVPWGSGRGYLHLDFATHL--VSLLRNSDTLAVFILGSA 107

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 81.9 bits (202), Expect = 1e-19
 Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 7/110 (6%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+ ++G  G  GS I  EA +RG  V ++ R+    +  +   ++   Q ++   D    
Sbjct: 2   KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA-GKITQTHK-DINILQKDIF--DLTLS 57

Query: 118 ALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA 167
            L     V+   G         + + T+  + I   +     R + +  A
Sbjct: 58  DLSDQNVVVDAYGISPDE---AEKHVTSLDHLISVLNGTVSPRLLVVGGA 104

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 80.6 bits (199), Expect = 5e-19
 Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 10/140 (7%)

Query: 58  KLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSW 115
            + +LG +G  G  + +E L++GL   V  + R  + +  +    NV     +    D +
Sbjct: 20  SVFILGASGETGRVLLKEILEQGLFSKVTLIGRR-KLTFDEEAYKNVNQEVVDFEKLDDY 78

Query: 116 KEALDGVTAVISCVGGF----GSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGV 171
             A  G      C+G      G+  +  +++    + +   A   G K F  +S+   G 
Sbjct: 79  ASAFQGHDVGFCCLGTTRGKAGAEGF-VRVDRDYVLKSAELAKAGGCKHFNLLSSK--GA 135

Query: 172 ANYLLQGYYEGKRAAETELL 191
                  Y + K   E ++ 
Sbjct: 136 DKSSNFLYLQVKGEVEAKVE 155

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 81.5 bits (201), Expect = 7e-19
 Identities = 28/147 (19%), Positives = 48/147 (32%), Gaps = 21/147 (14%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWAN-------NVIWHQGNLL 110
           ++L++GG G++G  I   ++  G     L R    S  D                + +L 
Sbjct: 6   RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLD 65

Query: 111 SSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFG 170
                 +AL  V  VIS + G          +    +  + A  E G  +    S  +FG
Sbjct: 66  DHQRLVDALKQVDVVISALAGGVL-----SHHILEQLKLVEAIKEAGNIKRFLPS--EFG 118

Query: 171 V-------ANYLLQGYYEGKRAAETEL 190
           +       A       +  KR     +
Sbjct: 119 MDPDIMEHALQPGSITFIDKRKVRRAI 145

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 75.4 bits (185), Expect = 4e-17
 Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 23/146 (15%)

Query: 58  KLLVLGGNGFVGSHICREALDR-GLTVASLSR--SGRSSLRDSWANNVIWHQGNLLSSDS 114
            + +LG  G +   +    L    + +    R    R          V   +G+  +   
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGX 66

Query: 115 WKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFG---- 170
            ++A+     V       GS          A+I  ++A S   ++R + +S A       
Sbjct: 67  LEQAVTNAEVVFVGAMESGS--------DMASI--VKALSRXNIRRVIGVSMAGLSGEFP 116

Query: 171 ------VANYLLQGYYEGKRAAETEL 190
                   + L   Y +G+R A   L
Sbjct: 117 VALEKWTFDNLPISYVQGERQARNVL 142

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 76.5 bits (188), Expect = 5e-17
 Identities = 34/147 (23%), Positives = 57/147 (38%), Gaps = 25/147 (17%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS--------LRDSWANNVIWHQGNL 109
           ++L++G  G++G H+ + +LD G     L R   +S        L    A+      G++
Sbjct: 6   RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 65

Query: 110 LSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADF 169
               S  EA+  V  VIS VG              + +N I+A  E G  +  + S  +F
Sbjct: 66  DDHASLVEAVKNVDVVISTVGSLQI---------ESQVNIIKAIKEVGTVKRFFPS--EF 114

Query: 170 GV------ANYLLQGYYEGKRAAETEL 190
           G       A    +  +E K      +
Sbjct: 115 GNDVDNVHAVEPAKSVFEVKAKVRRAI 141

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 74.2 bits (182), Expect = 4e-16
 Identities = 29/148 (19%), Positives = 56/148 (37%), Gaps = 26/148 (17%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSW---------ANNVIWHQGN 108
           K+L+LG  G +G HI   ++  G    +L R   ++              +  VI  +G+
Sbjct: 4   KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGD 63

Query: 109 LLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAAD 168
           +   ++  +A+  V  VI   G                +  I+A  E G  +  + S  +
Sbjct: 64  INDHETLVKAIKQVDIVICAAGRLL---------IEDQVKIIKAIKEAGNVKKFFPS--E 112

Query: 169 FGV------ANYLLQGYYEGKRAAETEL 190
           FG+      A   ++  +E K +    +
Sbjct: 113 FGLDVDRHDAVEPVRQVFEEKASIRRVI 140

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 72.3 bits (177), Expect = 2e-15
 Identities = 28/148 (18%), Positives = 47/148 (31%), Gaps = 25/148 (16%)

Query: 57  EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSW--------ANNVIWHQGN 108
           EK+++ GG G++G  + R +L         +R        S         +  V   +G 
Sbjct: 5   EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGE 64

Query: 109 LLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAAD 168
           +   +     L  V  VIS +              ++ I+ I A    G  +    S  D
Sbjct: 65  MEEHEKMVSVLKQVDIVISALPFPMI---------SSQIHIINAIKAAGNIKRFLPS--D 113

Query: 169 FGV------ANYLLQGYYEGKRAAETEL 190
           FG            +   E KR     +
Sbjct: 114 FGCEEDRIKPLPPFESVLEKKRIIRRAI 141

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 72.2 bits (177), Expect = 2e-15
 Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 16/118 (13%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSR--SGRSSLRDSW-ANNVIWHQGNLLSSDS 114
           K+L+ GG G++G+H+ + +L  G      +R  S +++L D + +   I  +G L   + 
Sbjct: 13  KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEK 72

Query: 115 WKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKG-VKRFVYISAADFGV 171
             E +  V  VIS +                    + A    G +KRF+    +DFGV
Sbjct: 73  LVELMKKVDVVISALAFPQI---------LDQFKILEAIKVAGNIKRFLP---SDFGV 118

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 67.8 bits (165), Expect = 9e-14
 Identities = 30/155 (19%), Positives = 51/155 (32%), Gaps = 21/155 (13%)

Query: 48  TVNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS------LRDSWANN 101
           TV+  P P  ++L+ G  GF+G  +   +LD       L+R G  S       +      
Sbjct: 2   TVSPVPSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKG 61

Query: 102 VIWHQGNLLSSDSWKEALDG--VTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVK 159
            I   G +   ++ ++ L    +  V+S VGG               I  ++A    G  
Sbjct: 62  AIIVYGLINEQEAMEKILKEHEIDIVVSTVGGESI---------LDQIALVKAMKAVGTI 112

Query: 160 RFVYISA----ADFGVANYLLQGYYEGKRAAETEL 190
           +    S      +           Y  KR     +
Sbjct: 113 KRFLPSEFGHDVNRADPVEPGLNMYREKRRVRQLV 147

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 65.8 bits (161), Expect = 1e-13
 Identities = 25/142 (17%), Positives = 48/142 (33%), Gaps = 19/142 (13%)

Query: 58  KLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSW 115
           ++L+ G  G  G H+    L       V + +R   +         +    G L  ++  
Sbjct: 7   RVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH-----PRLDNPVGPL--AELL 59

Query: 116 KEALDGVTAVISCVG----GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA--ADF 169
            +    +     C+G      GS      ++    +   + A E G + ++ +SA  AD 
Sbjct: 60  PQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA 119

Query: 170 GVANYLLQGYYEGKRAAETELL 191
             + +    Y   K   E  L 
Sbjct: 120 KSSIF----YNRVKGELEQALQ 137

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 67.4 bits (165), Expect = 1e-13
 Identities = 40/184 (21%), Positives = 64/184 (34%), Gaps = 27/184 (14%)

Query: 31  STDSNKVDEP-LKVEEAETVNVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRS 89
              +N  D      +E E     P  + K+ + G  GF+ SHI R     G  V +    
Sbjct: 3   MGTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIAS-DW 61

Query: 90  GRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVI---SCVGGFGSNSY----MYKIN 142
            ++           +H  +L   ++  +  +GV  V    + +GG G        +   N
Sbjct: 62  KKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNN 121

Query: 143 GTANINAIRAASEKGVKRFVYISAA----DFGVAN----YLLQG----------YYEGKR 184
              + N I AA   G+KRF Y S+A    +F         L +           +   K 
Sbjct: 122 TMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL 181

Query: 185 AAET 188
           A E 
Sbjct: 182 ATEE 185

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 66.3 bits (161), Expect = 2e-13
 Identities = 24/149 (16%), Positives = 46/149 (30%), Gaps = 13/149 (8%)

Query: 60  LVLGGNGFVGSHICREALDRGL-----TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           L++G  G +G+ +               V  ++R  R +  +     + + Q ++   D 
Sbjct: 5   LIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNP--INYVQCDISDPDD 62

Query: 115 WKEALDGVTAVISCVGGFGSNSY----MYKINGTANINAIRAASE--KGVKRFVYISAAD 168
            +  L  +T V        +N        + N     N + A       +K     +   
Sbjct: 63  SQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRK 122

Query: 169 FGVANYLLQGYYEGKRAAETELLTRYPYG 197
             +  +   G  E      TE L R  Y 
Sbjct: 123 HYMGPFESYGKIESHDPPYTEDLPRLKYM 151

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 62.8 bits (153), Expect = 3e-12
 Identities = 28/133 (21%), Positives = 45/133 (33%), Gaps = 6/133 (4%)

Query: 59  LLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWAN-NVIWHQGNLLSSDSWK 116
           ++V GG G  G  + R  L+ G   V  ++R+ R               QG+       +
Sbjct: 8   VVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIME 67

Query: 117 EALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA--ADFGVANY 174
            AL+G  A       + S S   ++           A   G+   VY          A  
Sbjct: 68  LALNGAYATFIVTNYWESCSQEQEV--KQGKLLADLARRLGLHYVVYSGLENIKKLTAGR 125

Query: 175 LLQGYYEGKRAAE 187
           L   +++GK   E
Sbjct: 126 LAAAHFDGKGEVE 138

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 62.7 bits (153), Expect = 5e-12
 Identities = 35/125 (28%), Positives = 51/125 (40%), Gaps = 15/125 (12%)

Query: 54  PPSEKLLVLGGNGFVGSHICREALDRGL----TVASLSRSG--RSSLRDSWANNVIWHQ- 106
           P    +LV G NGFV SH+  + L+ G     T  S S+    +      +         
Sbjct: 9   PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVV 68

Query: 107 GNLLSSDSWKEALDGVTAVI---SCVGGFGSNSYMYK--INGTANINAIRAAS-EKGVKR 160
            ++L   ++ E + G   V    S V        +    I GT  +NA+RAA+    VKR
Sbjct: 69  EDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGT--LNALRAAAATPSVKR 126

Query: 161 FVYIS 165
           FV  S
Sbjct: 127 FVLTS 131

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 61.6 bits (150), Expect = 7e-12
 Identities = 21/117 (17%), Positives = 34/117 (29%), Gaps = 20/117 (17%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           +LLV G  G +G  +          +     S           N    Q +L  +++   
Sbjct: 5   RLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGP----NEECVQCDLADANAVNA 60

Query: 118 ALDGVTAVI---------SCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYIS 165
            + G   ++                 N     I G  N+    AA   G  R V+ S
Sbjct: 61  MVAGCDGIVHLGGISVEKPFEQILQGN-----IIGLYNL--YEAARAHGQPRIVFAS 110

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 60.8 bits (148), Expect = 1e-11
 Identities = 23/121 (19%), Positives = 35/121 (28%), Gaps = 24/121 (19%)

Query: 56  SEKLLVLGGNGFVGSHICREALDRGLTVASLSR--SGRSSLRDSWANNVIWHQGNLLSSD 113
             +LLV G  G VGS I          V        G +        +      +L  + 
Sbjct: 2   LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA------EAHEEIVACDLADAQ 55

Query: 114 SWKEALDGVTAVI---------SCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYI 164
           +  + +     +I                +N     I G  N+    AA   G  R V+ 
Sbjct: 56  AVHDLVKDCDGIIHLGGVSVERPWNDILQAN-----IIGAYNL--YEAARNLGKPRIVFA 108

Query: 165 S 165
           S
Sbjct: 109 S 109

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 60.8 bits (148), Expect = 2e-11
 Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 11/113 (9%)

Query: 59  LLVLGGNGFVGSHICREALDR--GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK 116
           + V G  G +G  + +  L +     + ++ R+            V    G+    +S +
Sbjct: 3   IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNV-EKASTLADQGVEVRHGDYNQPESLQ 61

Query: 117 EALDGVTAV--ISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA 167
           +A  GV+ +  IS         Y   +    + N ++AA + GVK   Y   A
Sbjct: 62  KAFAGVSKLLFIS------GPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYA 108

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 60.7 bits (148), Expect = 2e-11
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 18/131 (13%)

Query: 50  NVPPPPSEKLLVLGGNGFVGSHICREALDRGL----TVASLSRSGR-SSLRDSW-ANNVI 103
              P   +   V+GG GFV S + +  L +G     TV       + S L +     ++ 
Sbjct: 3   TQHPIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLK 62

Query: 104 WHQGNLLSSDSWKEALDGVTAVI---SCVGGFGSNSY---MYK--INGTANINAIRAASE 155
             + +L    S++  + G   V    + V  F S      M K  I G  N+  ++A + 
Sbjct: 63  IFRADLTDELSFEAPIAGCDFVFHVATPV-HFASEDPENDMIKPAIQGVVNV--MKACTR 119

Query: 156 -KGVKRFVYIS 165
            K VKR +  S
Sbjct: 120 AKSVKRVILTS 130

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 60.0 bits (146), Expect = 3e-11
 Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 6/111 (5%)

Query: 58  KLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK 116
            +++ G  G +G+HI  +A+   +       R+    + D W   V   Q +  + +S  
Sbjct: 2   NIMLTGATGHLGTHITNQAIANHIDHFHIGVRN-VEKVPDDWRGKVSVRQLDYFNQESMV 60

Query: 117 EALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA 167
           EA  G+  V+        +            N + AA + GV   ++I   
Sbjct: 61  EAFKGMDTVVFIPSIIHPSFKRI----PEVENLVYAAKQSGVAHIIFIGYY 107

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 59.1 bits (144), Expect = 7e-11
 Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 16/128 (12%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
            ++V GG GF+GSH+  + L     +    +LS SG     +         + +L + D 
Sbjct: 3   LIVVTGGAGFIGSHVV-DKLSESNEIVVIDNLS-SGN---EEFVNEAARLVKADLAADD- 56

Query: 115 WKEALDGVTAVI-----SCVGGFGSN-SYMYKINGTANINAIRAASEKGVKRFVYIS-AA 167
            K+ L G   V        V     N   +Y+ N  A    + A  + GV R V+ S + 
Sbjct: 57  IKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTST 116

Query: 168 DFGVANYL 175
            +G A  +
Sbjct: 117 VYGEAKVI 124

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 58.3 bits (142), Expect = 1e-10
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 25/130 (19%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           ++LV GG GF+GSHI  + L RGL VA   +L+   R ++       V + + +L   + 
Sbjct: 2   RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPK----GVPFFRVDLRDKEG 57

Query: 115 WKEALDG--VTAVI-----SCVGGFGSNS-----YMYKINGTANINAIRAASEKGVKRFV 162
            + A      T V      + V      S       +++N    +N + A  + GV++ V
Sbjct: 58  VERAFREFRPTHVSHQAAQASVK----VSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLV 113

Query: 163 YIS--AADFG 170
           + S   A +G
Sbjct: 114 FASTGGAIYG 123

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 57.6 bits (140), Expect = 2e-10
 Identities = 26/119 (21%), Positives = 41/119 (34%), Gaps = 25/119 (21%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASL--SRSGRSSLRDSWANNVIWHQGNLLSSDSW 115
           K+ V GG GF+G ++     + G T   L  S   ++       N+  +   +    D  
Sbjct: 4   KIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA------INDYEYRVSDYTLED-L 56

Query: 116 KEALDGVTAVI---------SCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYIS 165
              L+ V AV+           +  F  N        T N+    A  E  +   VY S
Sbjct: 57  INQLNDVDAVVHLAATRGSQGKISEFHDN-----EILTQNL--YDACYENNISNIVYAS 108

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 56.8 bits (138), Expect = 4e-10
 Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 26/129 (20%)

Query: 57  EKLLVLGGNGFVGSHICREALDRGLTV-ASLSRSGRSSLRDSWANNVIW----------- 104
            ++ V GG GF+GS I +  L+ G +V  ++    R+        + +            
Sbjct: 2   GRVCVTGGTGFLGSWIIKSLLENGYSVNTTI----RADPERKRDVSFLTNLPGASEKLHF 57

Query: 105 HQGNLLSSDSWKEALDGVTAVISCVGGFGSNS-----YMYK--INGTANINAIRAASE-K 156
              +L + DS+  A++G   +                 + K  ++G   I  ++A    K
Sbjct: 58  FNADLSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGI--LKACVNSK 115

Query: 157 GVKRFVYIS 165
            VKRF+Y S
Sbjct: 116 TVKRFIYTS 124

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 56.8 bits (138), Expect = 5e-10
 Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 15/129 (11%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           ++L+ GG G +GS++    L +G  +    + +   R  L       +   +G++  +  
Sbjct: 22  RILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP--PVAGLSVIEGSVTDAGL 79

Query: 115 WKEALDG--VTAVI-----SCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYIS-A 166
            + A D    T V+            +      + G+  IN  +AAS+ GVKR +    A
Sbjct: 80  LERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGS--INVAKAASKAGVKRLLNFQTA 137

Query: 167 ADFGVANYL 175
             +G    +
Sbjct: 138 LCYGRPATV 146

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 56.1 bits (136), Expect = 9e-10
 Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 17/125 (13%)

Query: 56  SEKLLVLGGNGFVGSHICREALDRGL----TVASLSRSGR-SSLRDSW--ANNVIWHQGN 108
           SE + V G +GF+GS +    L+RG     TV   +   +   L D      ++   + +
Sbjct: 5   SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKAD 64

Query: 109 LLSSDSWKEALDGVTAVISCVGGFGSNS-----YMYK--INGTANINAIRAASE-KGVKR 160
           L    S+ EA+ G T V          S      + K  I G   I  +++ +  K V+R
Sbjct: 65  LADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGI--MKSCAAAKTVRR 122

Query: 161 FVYIS 165
            V+ S
Sbjct: 123 LVFTS 127

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 54.6 bits (132), Expect = 2e-09
 Identities = 21/112 (18%), Positives = 37/112 (33%), Gaps = 13/112 (11%)

Query: 60  LVLGGNGFVGSHICREALDR--GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
            + G  G +G ++    +       + ++ R+  +  +   A  +   Q +     +   
Sbjct: 3   AITGATGQLGHYVIESLMKTVPASQIVAIVRNP-AKAQALAAQGITVRQADYGDEAALTS 61

Query: 118 ALDGVTAV--ISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA 167
           AL GV  +  IS                  + N I AA   GVK   Y S  
Sbjct: 62  ALQGVEKLLLISSSEVGQR--------APQHRNVINAAKAAGVKFIAYTSLL 105

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 54.6 bits (132), Expect = 3e-09
 Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 32/132 (24%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTV-----------ASLSRSGRSSLRDSWANNVIWHQ 106
             L+ G  GF+GS++    L     V            +L    RS + +   +N  + Q
Sbjct: 29  VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEV-RSLVSEKQWSNFKFIQ 87

Query: 107 GNLLSSDSWKEALDGVTAVI--SCVGG-----------FGSNSYMYKINGTANINAIRAA 153
           G++ + D    A  GV  V+  + +G              +N     I+G  N+  + AA
Sbjct: 88  GDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATN-----IDGFLNM--LIAA 140

Query: 154 SEKGVKRFVYIS 165
            +  V+ F Y +
Sbjct: 141 RDAKVQSFTYAA 152

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 53.8 bits (130), Expect = 4e-09
 Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 20/123 (16%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           K+ + G  G +GSHI    L+RG  V    + +   R  L+D    N+ + +G++     
Sbjct: 23  KVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH--PNLTFVEGSIADHAL 80

Query: 115 WKEALDGV--TAVI----SCVGGFGSNSYMYKINGTANI----NAIRAASEKGVKRFVYI 164
             + +  +   AV+    S       +   +  +   N     N ++AA +  V RFVY 
Sbjct: 81  VNQLIGDLQPDAVVHTAAS-----YKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYF 135

Query: 165 SAA 167
             A
Sbjct: 136 QTA 138

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 53.3 bits (129), Expect = 6e-09
 Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 26/151 (17%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           +++V GG GF+GSH+  + ++ G  V    +LS SGR   R+    +   H  +L     
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLS-SGR---REFVNPSAELHVRDLKDYSW 57

Query: 115 WKEALDGVTAVI-----SCVGGFGSN-SYMYKINGTANINAIRAASEKGVKRFVYIS-AA 167
                     V        V    +     +  N  A  N +  A + GV+  V+ S + 
Sbjct: 58  GAGI--KGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSST 115

Query: 168 DFGVANYLLQG----------YYEGKRAAET 188
            +G A+ +             Y   K A E 
Sbjct: 116 VYGDADVIPTPEEEPYKPISVYGAAKAAGEV 146

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 53.2 bits (128), Expect = 7e-09
 Identities = 19/112 (16%), Positives = 38/112 (33%), Gaps = 8/112 (7%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+L+ G  G +G  + R    +G  V  L RS            V     ++   D+   
Sbjct: 5   KILIAGC-GDLGLELARRLTAQGHEVTGLRRSA-----QPMPAGVQTLIADVTRPDTLAS 58

Query: 118 ALDG-VTAVISCVG-GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA 167
            +      ++ CV     S+ +          N + A     ++   ++S+ 
Sbjct: 59  IVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSST 110

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 53.3 bits (128), Expect = 9e-09
 Identities = 25/140 (17%), Positives = 47/140 (33%), Gaps = 11/140 (7%)

Query: 53  PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWAN--NVIWHQGNLL 110
               + + V+G  G  G+ + R A   G  V +   S +  + +      NV   QG LL
Sbjct: 2   AQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLL 61

Query: 111 SS-DSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKG-VKRFVYISAAD 168
           ++        +G          F + +           +   AA   G ++ ++Y S  D
Sbjct: 62  NNVPLMDTLFEGAHLA------FINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115

Query: 169 FGVAN-YLLQGYYEGKRAAE 187
             +   +     +  K   E
Sbjct: 116 HSLYGPWPAVPMWAPKFTVE 135

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 53.0 bits (128), Expect = 9e-09
 Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 32/132 (24%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTV-----------ASLSRSGRSSLRDSWANNVIWHQ 106
             L+ G  GF+GS++  + L     V            +L         + W+    + +
Sbjct: 27  TWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWS-RFCFIE 85

Query: 107 GNLLSSDSWKEALDGVTAVI--SCVGG-----------FGSNSYMYKINGTANINAIRAA 153
           G++    + ++ + GV  V+  + +G              +N     I G  NI  + AA
Sbjct: 86  GDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATN-----ITGFLNI--LHAA 138

Query: 154 SEKGVKRFVYIS 165
               V+ F Y +
Sbjct: 139 KNAQVQSFTYAA 150

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 50.8 bits (122), Expect = 7e-08
 Identities = 12/69 (17%), Positives = 20/69 (28%), Gaps = 11/69 (15%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
            + + G  G VG  +  +    G  V  L R               W        +   +
Sbjct: 149 TVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPK------PGKRFWD-----PLNPASD 197

Query: 118 ALDGVTAVI 126
            LDG   ++
Sbjct: 198 LLDGADVLV 206

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 50.2 bits (121), Expect = 8e-08
 Identities = 27/150 (18%), Positives = 46/150 (30%), Gaps = 25/150 (16%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           ++L+ GG GF+G H+ R  +  G  V     L                 + +  +L  + 
Sbjct: 9   RILITGGAGFIGGHLARALVASGEEVTVLDDLR-VPP---MIPPEGTGKFLEKPVL--EL 62

Query: 115 WKEALDGVTAVI--SCVGG---FGSNSYMYKINGTANINAIRAASEKGVKRFVYIS-AAD 168
            +  L  V  V   +              Y  N  +  + +   +  GV + V  S    
Sbjct: 63  EERDLSDVRLVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEV 122

Query: 169 FGVANYLLQG----------YYEGKRAAET 188
           +G A+ L             Y   K   E 
Sbjct: 123 YGQADTLPTPEDSPLSPRSPYAASKVGLEM 152

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 50.2 bits (120), Expect = 9e-08
 Identities = 29/159 (18%), Positives = 61/159 (38%), Gaps = 31/159 (19%)

Query: 58  KLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           K+L+LG NGF+G H+ +  L+     +    +       L       + + +G++  +  
Sbjct: 26  KVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKH--ERMHFFEGDITINKE 83

Query: 115 WKEALDG-VTAVISCVGGFGSNSYMY------KINGTANINAIRAASEKGVKRFVYISAA 167
           W E        ++  V      +Y+       +++  AN+  +R+A + G K  V+ S +
Sbjct: 84  WVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTS 142

Query: 168 D-FGVANY---------LLQG--------YYEGKRAAET 188
           + +G+            L  G        Y   K+  + 
Sbjct: 143 EVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDR 181

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 50.3 bits (120), Expect = 9e-08
 Identities = 33/157 (21%), Positives = 53/157 (33%), Gaps = 41/157 (26%)

Query: 46  AETVNVPPPPSEKLLVL--GGNGFVGSHICREALDR---GLTVASLSRSGR--------- 91
           A  VN+P P  E   VL  G  GF+G ++  E L R      +  L R+           
Sbjct: 61  ATAVNLPGPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLE 120

Query: 92  -----------SSLRDSWANNVIWHQGNL------LSSDSWKEALDGVTAVISCVGG--- 131
                         ++  A+ +    G+       L    W+   + V  ++        
Sbjct: 121 KTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDS--AAMV 178

Query: 132 -FGSNSYMYKIN--GTANINAIRAASEKGVKRFVYIS 165
                  ++  N  GTA +  IR A    +K F Y+S
Sbjct: 179 NAFPYHELFGPNVAGTAEL--IRIALTTKLKPFTYVS 213

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score = 49.8 bits (120), Expect = 1e-07
 Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 16/125 (12%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
            +L+ GG G++GSH  ++ +D GL+V    +L      ++ +       ++ G+L     
Sbjct: 3   SILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITE----GAKFYNGDLRDKAF 58

Query: 115 WKEALD--GVTAVI-----SCVGGFGSNSYMYKINGTAN-INAIRAASEKGVKRFVYIS- 165
            ++      + AV+     S VG        Y  N     +  +    E  V +F++ S 
Sbjct: 59  LRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118

Query: 166 AADFG 170
           AA +G
Sbjct: 119 AATYG 123

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 49.5 bits (118), Expect = 1e-07
 Identities = 19/139 (13%), Positives = 44/139 (31%), Gaps = 25/139 (17%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
            +++ G  GFVG ++  +                        ++ I+        +  + 
Sbjct: 2   NIVITGAKGFVGKNLKADLTSTT-------------------DHHIFEVHRQTKEEELES 42

Query: 118 ALDGVTAVI--SCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYL 175
           AL     ++  + V     +      N +   + +   +    K  + +S++     +  
Sbjct: 43  ALLKADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQDNP 102

Query: 176 LQGYYEGKRAAETELLTRY 194
              Y E K   E +LL  Y
Sbjct: 103 ---YGESKLQGE-QLLREY 117

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 48.1 bits (115), Expect = 3e-07
 Identities = 21/119 (17%), Positives = 45/119 (37%), Gaps = 12/119 (10%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL 119
           LV G +G +G+ +     ++      ++    S +       + +   ++ + D    A+
Sbjct: 3   LVTGSSGQIGTELVPYLAEKYGKKNVIA----SDIVQRDTGGIKFITLDVSNRDEIDRAV 58

Query: 120 D--GVTAVISCVGGFGSNS-----YMYKINGTANINAIRAASEKGVKRFVYIS-AADFG 170
           +   + A+    G   +         YK+N     N + AA +  V++ V  S    FG
Sbjct: 59  EKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFG 117

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 47.7 bits (114), Expect = 6e-07
 Identities = 23/125 (18%), Positives = 45/125 (36%), Gaps = 21/125 (16%)

Query: 58  KLLVLGGNGFVGSHICREALDRG----LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSD 113
            ++V+GG GFVGS++ +  L+ G      V +L  + + ++ D     V + + ++    
Sbjct: 34  NVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDH--PAVRFSETSITDDA 91

Query: 114 SWKEALDGVTAVI----------SCVGGFGSNSYMYKINGTANINAIRAASE-KGVKRFV 162
                 D    V           S       +    + N    +         K +K+ V
Sbjct: 92  LLASLQDEYDYVFHLATYHGNQSSIHDPLADH----ENNTLTTLKLYERLKHFKRLKKVV 147

Query: 163 YISAA 167
           Y +A 
Sbjct: 148 YSAAG 152

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 46.9 bits (112), Expect = 1e-06
 Identities = 26/118 (22%), Positives = 46/118 (38%), Gaps = 9/118 (7%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLT----VASLSRSGRSSLRDSWANNVIWHQGNLLSSD 113
            ++V GG GF+GS+I +   D+G+T    V +L    +              + + L   
Sbjct: 48  MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI 107

Query: 114 SWKEALDGVTAVI---SCVGGFGSN-SYMYKINGTANINAIRAASEKGVKRFVYISAA 167
              E    V A+    +C      +  YM   N   +   +    E+ +  F+Y S+A
Sbjct: 108 MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSA 164

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 46.0 bits (109), Expect = 2e-06
 Identities = 23/114 (20%), Positives = 42/114 (36%), Gaps = 18/114 (15%)

Query: 56  SEKLLVLGGNGFVGSHICREALDRGLTVASLSRS--GRSSLRDSWANNVIWHQGNLLSSD 113
           +  LL  G  G+    + R    +G  +   SR+     ++R S A  ++W         
Sbjct: 5   TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLW--------P 55

Query: 114 SWKEALDGVTAVISCVG-GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166
             + +LDGVT ++       G +  +      A +    AA     +   Y+S 
Sbjct: 56  GEEPSLDGVTHLLISTAPDSGGDPVL------AALGDQIAARAAQFRWVGYLST 103

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score = 45.8 bits (109), Expect = 3e-06
 Identities = 22/124 (17%), Positives = 45/124 (36%), Gaps = 9/124 (7%)

Query: 50  NVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWAN-NVIWHQGN 108
                   ++L+LG NGF+G+H+    L            G  ++     + +  + +G+
Sbjct: 309 ACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGD 368

Query: 109 LLSSDSWKEALDGVT-AVISCVGGFGSNSYM------YKINGTANINAIRAASEKGVKRF 161
           +     W E        V+  V       Y       ++++   N+  IR   +   KR 
Sbjct: 369 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRI 427

Query: 162 VYIS 165
           ++ S
Sbjct: 428 IFPS 431

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 44.9 bits (107), Expect = 4e-06
 Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 9/116 (7%)

Query: 60  LVLGGNGFVGSHICREALDRGLT----VASLSRSGRSSLRDSWANNVIWHQGNLLSSDSW 115
           +V GG GF+GS+I +   D+G+T    V +L    +              + + L     
Sbjct: 3   IVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMA 62

Query: 116 KEALDGVTAVI---SCVGGFGSN-SYMYKINGTANINAIRAASEKGVKRFVYISAA 167
            E    V A+    +C      +  YM   N   +   +    E+ +  F+Y S+A
Sbjct: 63  GEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSA 117

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118

 Score = 42.9 bits (101), Expect = 7e-06
 Identities = 22/107 (20%), Positives = 31/107 (28%), Gaps = 19/107 (17%)

Query: 58  KLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
            + V+G  G +G  I           +TVA    +  + L       V   Q +      
Sbjct: 7   NICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRM---GVATKQVDAKDEAG 62

Query: 115 WKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRF 161
             +AL G  AVIS                       +AA   G   F
Sbjct: 63  LAKALGGFDAVISA------------APFFLTPIIAKAAKAAGAHYF 97

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 13/118 (11%)

Query: 58  KLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           ++L+LG NGF+G+H+    L      +    +     S   +    +  + +G++     
Sbjct: 2   RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH--PHFHFVEGDISIHSE 59

Query: 115 WKEALDG-VTAVISCVGGFGSNSYMY------KINGTANINAIRAASEKGVKRFVYIS 165
           W E        V+  V       Y        +++   N+  IR   +   KR ++ S
Sbjct: 60  WIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPS 116

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 18/131 (13%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRS------GRSSLRDSWANNVIWHQGNLLS 111
            + ++G  G VG  + +  +  G                +      ++  V     +L +
Sbjct: 16  HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSA 75

Query: 112 SDSWKEALD-GVTAVI---SCVGGFGSNSYM--YKIN--GTANI-NAIRAASEKG--VKR 160
               ++ ++     +    + V G     +   Y+IN  GT  + +AIR A+ K     R
Sbjct: 76  PGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPR 135

Query: 161 FVYIS-AADFG 170
            V+ S  A FG
Sbjct: 136 VVFTSSIAVFG 146

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 24/131 (18%), Positives = 47/131 (35%), Gaps = 25/131 (19%)

Query: 56  SEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS 114
           + K+L++G  G +G+ + ++     G     +  S    L     N+  +   N L  + 
Sbjct: 2   NPKILIIGACGQIGTELTQKLRKLYGTEN--VIASDIRKLNTDVVNSGPFEVVNALDFNQ 59

Query: 115 WKE--------------ALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKR 160
            +               AL   TA  +    +  N     +N   ++  +  A  K +K+
Sbjct: 60  IEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLN-----MNSLFHV--LNLAKAKKIKK 112

Query: 161 FVYIS-AADFG 170
             + S  A FG
Sbjct: 113 IFWPSSIAVFG 123

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 24/135 (17%)

Query: 52  PPPPSEKLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLR--DSWAN-NVIWH 105
               S+ +LV GG G++GSH   E ++ G       +LS S   S+   +     ++ ++
Sbjct: 7   SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFY 66

Query: 106 QGNLLSSDSWKEALDGV------TAVISC-----VGGFGSN--SYMYKINGTANINAIRA 152
           + +L      ++ L+ V       +VI       VG        Y Y  N    +  +  
Sbjct: 67  EVDLCD----RKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRY-YHNNILGTVVLLEL 121

Query: 153 ASEKGVKRFVYISAA 167
             +  V +FV+ S+A
Sbjct: 122 MQQYNVSKFVFSSSA 136

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348

 Score = 39.0 bits (92), Expect = 5e-04
 Identities = 37/137 (27%), Positives = 57/137 (41%), Gaps = 30/137 (21%)

Query: 56  SEKLLVLGGNGFVGSHICREALDRGLTVASL-----SRSGRSSLRDSWA-------NNVI 103
           +EK+LV GG G++GSH   E L+ G     +     +  G  SL +S          +V 
Sbjct: 2   AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVE 61

Query: 104 WHQGNLLSSDSWKEALDGV------TAVISC-----VGGFGSN--SYMYKINGTANINAI 150
           + + ++L     + AL  +       AVI       VG        Y Y++N T  I  +
Sbjct: 62  FEEMDILD----QGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDY-YRVNLTGTIQLL 116

Query: 151 RAASEKGVKRFVYISAA 167
                 GVK  V+ S+A
Sbjct: 117 EIMKAHGVKNLVFSSSA 133

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 39.0 bits (91), Expect = 5e-04
 Identities = 6/26 (23%), Positives = 13/26 (50%)

Query: 58 KLLVLGGNGFVGSHICREALDRGLTV 83
          +++V+GG+G+ G         +   V
Sbjct: 13 RVMVIGGDGYCGWATALHLSKKNYEV 38

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338

 Score = 38.6 bits (91), Expect = 6e-04
 Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 24/129 (18%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLR--DSWAN-NVIWHQGNLLS 111
           ++LV GG+G++GSH C + L  G  V    +L  S RS L   +     +  + +G++ +
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN 61

Query: 112 SDSWKEALDGV------TAVISC-----VGGFGSN--SYMYKINGTANINAIRAASEKGV 158
               +  +  +        VI       VG        Y Y  N    +  I A     V
Sbjct: 62  ----EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEY-YDNNVNGTLRLISAMRAANV 116

Query: 159 KRFVYISAA 167
           K F++ S+A
Sbjct: 117 KNFIFSSSA 125

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397

 Score = 38.4 bits (90), Expect = 8e-04
 Identities = 34/151 (22%), Positives = 50/151 (33%), Gaps = 43/151 (28%)

Query: 58  KLLVLGGNGFVGSHICREAL-DRGLTVA---SLSRSGRSSLRDSWANNVIWHQGNLLSSD 113
           ++LV GG G++GSH  R  L D   +V    SL  +   S       NV           
Sbjct: 4   RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63

Query: 114 SW---------------KEALDGV-------TAVI-----SCVGGFGSNS------YMYK 140
                            ++ L+GV        AV+       VG     S      Y Y 
Sbjct: 64  PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVG----ESVRDPLKY-YD 118

Query: 141 INGTANINAIRAASEKGVKRFVYIS-AADFG 170
            N    +  ++A       + ++ S AA FG
Sbjct: 119 NNVVGILRLLQAMLLHKCDKIIFSSSAAIFG 149

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341

 Score = 38.2 bits (90), Expect = 8e-04
 Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 24/129 (18%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLR--DSWAN-NVIWHQGNLLS 111
            +LV GG G++GSH   E L  G  V    +L  S R ++   +        +H+ ++  
Sbjct: 7   TILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSD 66

Query: 112 SDSWKEALDGV------TAVISC-----VGGFGSN--SYMYKINGTANINAIRAASEKGV 158
               + AL  +      TA I       VG   +    Y Y+ N  + ++ +R   E+ V
Sbjct: 67  ----ERALARIFDAHPITAAIHFAALKAVGESVAKPIEY-YRNNLDSLLSLLRVMRERAV 121

Query: 159 KRFVYISAA 167
           KR V+ S+A
Sbjct: 122 KRIVFSSSA 130

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	198
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.94
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.94
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.93
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.93
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.93
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.93
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.93
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.93
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.92
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.92
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.92
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.92
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.92
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.92
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.92
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.92
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.92
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.92
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.92
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.92
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.92
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.91
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.91
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.91
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.91
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.91
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.91
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.91
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.91
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.91
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.91
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.91
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.91
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.9
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.9
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.9
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.9
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.9
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.9
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.9
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.9
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.9
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.9
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.9
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.9
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.9
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.89
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.89
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.89
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.89
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.89
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.89
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.89
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.89
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.89
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.89
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.88
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.88
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.88
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.88
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.88
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.88
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.88
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.88
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.88
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.88
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.88
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.88
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.88
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.88
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.87
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.87
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.87
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.87
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.87
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.87
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.87
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.87
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.87
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.87
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.87
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.87
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.87
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.87
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.87
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.87
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.87
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.87
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.87
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.87
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.87
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.87
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.87
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.87
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.87
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.87
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.87
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.87
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.87
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.87
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.87
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.87
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.87
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.87
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.86
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.86
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.86
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.86
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.86
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.86
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.86
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.86
1spx_A	278	Short-chain reductase family member (5L265); paral	99.86
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.86
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.86
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.86
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.86
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.86
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.86
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.86
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.86
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.86
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.86
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.86
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.86
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.86
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.86
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.86
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.86
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.86
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.86
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.86
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.86
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.86
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.86
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.86
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.86
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.86
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.86
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.86
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.86
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.86
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.86
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.86
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.86
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.86
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.86
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.85
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.85
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.85
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.85
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.85
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.85
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.85
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.85
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.85
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.85
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.85
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.85
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.85
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.85
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.85
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.85
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.85
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.85
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.85
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.85
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.85
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.85
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.85
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.85
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.85
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.85
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.85
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.85
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.85
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.85
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.85
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.85
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.85
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.85
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.85
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.85
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.85
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.85
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.85
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.85
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.85
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.85
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.85
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.85
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.85
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.84
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.84
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.84
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.84
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.84
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.84
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.84
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.84
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.84
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.84
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.84
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.84
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.84
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.84
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.84
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.84
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.84
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.84
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.84
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.84
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.84
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.84
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.84
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.84
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.84
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.84
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.84
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.84
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.84
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.84
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.84
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.84
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.84
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.84
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.84
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.84
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.84
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.84
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.84
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.84
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.83
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.83
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.83
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.83
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.83
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.83
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.83
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.83
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.83
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.83
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.83
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.83
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.83
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.83
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.83
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.83
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.83
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.83
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.83
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.83
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.83
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.83
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.83
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.83
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.83
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.83
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.83
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.82
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.82
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.82
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.82
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.82
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.82
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.82
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.82
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.82
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.82
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.82
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.82
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.82
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.82
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.81
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.81
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.81
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.81
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.81
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.81
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.81
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.8
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.8
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.8
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.8
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.8
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.8
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.79
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.79
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.78
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.78
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.77
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.77
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.77
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.77
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.75
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.75
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.74
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.71
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.7
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.66
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.65
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.65
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.63
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.63
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.62
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.61
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.6
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.6
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.59
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.57
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.57
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.56
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.56
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.52
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.45
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.27
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.17
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.08
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.06
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	99.03
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.98
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.96
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.94
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.9
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.89
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.86
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.85
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.82
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.81
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.79
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.79
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.73
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.71
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.6
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.58
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.46
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.44
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.38
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.35
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.34
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.34
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.19
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.12
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.08
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.08
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.98
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.97
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.94
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.94
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.93
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.91
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.9
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.89
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.89
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.87
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.85
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.84
1lnq_A	336	MTHK channels, potassium channel related protein;	97.84
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.82
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.79
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.78
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.77
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.76
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.73
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.73
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.72
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.71
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.65
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.64
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.64
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.63
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.62
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.62
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.62
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.61
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.61
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.61
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.61
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.6
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.59
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.59
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.57
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.57
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.57
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.56
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.56
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.56
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.55
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.54
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.54
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.52
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.51
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.51
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	97.51
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.49
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.49
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.48
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.48
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.45
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.43
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.42
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.41
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	97.4
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.39
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.39
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.39
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.38
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.37
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.36
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.34
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.34
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.33
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.32
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	97.32
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.31
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.3
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.3
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.29
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.28
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.26
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.26
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.25
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	97.25
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.25
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.24
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.24
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.22
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.22
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.21
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.21
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.19
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	97.18
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.18
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.17
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.17
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	97.16
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	97.16
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.15
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	97.15
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.14
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	97.14
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.14
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.12
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.12
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.11
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.11
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.1
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.08
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.08
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.08
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.08
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.07
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.07
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.07
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	97.05
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.05
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	97.04
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.03
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	97.02
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.02
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.01
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.99
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.98
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.98
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.97
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.97
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	96.96
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.95
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.94
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.94
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.93
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.93
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.92
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.92
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	96.9
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.9
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.89
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.88
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.87
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	96.86
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	96.86
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	96.85
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.84
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	96.84
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.83
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	96.83
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.83
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.81
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	96.81
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.81
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.81
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	96.8
3eag_A	326	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME	96.8
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.8
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.78
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.75
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	96.74
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.73
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.72

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.94  E-value=4.4e-26  Score=175.74  Aligned_cols=138  Identities=24%  Similarity=0.267  Sum_probs=114.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS  134 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~  134 (198)
                      .||+|+||||+|+||++++++|+++|++|++++|++.+...  ...+++++.+|++|.+++.++++++|+|||++|....
T Consensus         3 ~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~   80 (227)
T 3dhn_A            3 KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI--ENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWN   80 (227)
T ss_dssp             CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC--CCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC---
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh--ccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCC
Confidence            46899999999999999999999999999999998654322  2368999999999999999999999999999998665


Q ss_pred             CccceehhhHHHHHHHHHHHHcCCCEEEEeeccc-cCC---------CCCCcchHHHHHHHHHHHHHhhC
Q 029125          135 NSYMYKINGTANINAIRAASEKGVKRFVYISAAD-FGV---------ANYLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       135 ~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~-~~~---------~~~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                      ....+++|+.++.++++++.+.++++|||+||.. +..         +..+.+.|+.+|++.|.+++...
T Consensus        81 ~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~  150 (227)
T 3dhn_A           81 NPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLM  150 (227)
T ss_dssp             ---CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGG
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHh
Confidence            5668999999999999999999999999999943 321         33457899999999998877664

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.94  E-value=5.3e-26  Score=179.99  Aligned_cols=134  Identities=19%  Similarity=0.108  Sum_probs=117.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC--C
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF--G  133 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~--~  133 (198)
                      +|+|+||||+|+||++++++|+++|++|++++|++.+..    ..+++++.+|++|.+++.++++++|+||||||..  .
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~~~   78 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----GPNEECVQCDLADANAVNAMVAGCDGIVHLGGISVEK   78 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcCcC
Confidence            578999999999999999999999999999999865532    4678999999999999999999999999999964  3


Q ss_pred             CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccC-----------CCCCCcchHHHHHHHHHHHHHhh
Q 029125          134 SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFG-----------VANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       134 ~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~-----------~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      .++..+++|+.+++++++++.+.+.++|||+|| .+|+           .+..+.+.|+.+|+++|.+++.+
T Consensus        79 ~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~  150 (267)
T 3rft_A           79 PFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMY  150 (267)
T ss_dssp             CHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence            456778999999999999999999999999999 5564           23455689999999999998754

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.93  E-value=6.2e-26  Score=185.21  Aligned_cols=136  Identities=24%  Similarity=0.231  Sum_probs=114.9

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ...++|+||||||+||||++|+++|+++|++|++++|+...       .++.++.+|++|.+.+.++++++|+|||+|+.
T Consensus        15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~   87 (347)
T 4id9_A           15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAF   87 (347)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHhCCCEEEECCcc
Confidence            34567899999999999999999999999999999998644       56789999999999999999999999999996


Q ss_pred             CCC----CccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCC------------CCCCcchHHHHHHHHHHHHHhhC
Q 029125          132 FGS----NSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGV------------ANYLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       132 ~~~----~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~------------~~~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                      ...    +...+++|+.++.+++++|.+.++++|||+|| .+|+.            +..+.+.|+.+|+++|.+++.+.
T Consensus        88 ~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~  167 (347)
T 4id9_A           88 MSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQ  167 (347)
T ss_dssp             CCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             cCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHH
Confidence            542    25678899999999999999999999999999 56765            23456789999999999998653

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.93  E-value=4.1e-25  Score=180.58  Aligned_cols=139  Identities=19%  Similarity=0.220  Sum_probs=117.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccccc------C----CCCeEEEEccCCCHHHHHHHhcCCCE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS------W----ANNVIWHQGNLLSSDSWKEALDGVTA  124 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~------~----~~~~~~~~~D~~d~~~~~~~~~~~d~  124 (198)
                      ++|+|+||||+||||++|+++|+++|++|++++|.........      .    ..+++++.+|+.|++++.++++++|+
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~  103 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH  103 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence            5689999999999999999999999999999999765422110      0    06799999999999999999999999


Q ss_pred             EEEccccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC----------CCcchHHHHHHHHH
Q 029125          125 VISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN----------YLLQGYYEGKRAAE  187 (198)
Q Consensus       125 vi~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~----------~~~~~Y~~sK~~~e  187 (198)
                      |||+||...      ++...+++|+.++.+++++|.+.++++|||+|| .+|+...          .+.+.|+.+|+++|
T Consensus       104 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E  183 (351)
T 3ruf_A          104 VLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNE  183 (351)
T ss_dssp             EEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHH
T ss_pred             EEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHHH
Confidence            999999643      334567999999999999999999999999999 5676432          34678999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++.+
T Consensus       184 ~~~~~~  189 (351)
T 3ruf_A          184 IYAQVY  189 (351)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998865

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.93  E-value=5.6e-25  Score=168.97  Aligned_cols=130  Identities=22%  Similarity=0.281  Sum_probs=112.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCC-HHHHHHHhcCCCEEEEccccCCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLS-SDSWKEALDGVTAVISCVGGFGSN  135 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~d~vi~~ag~~~~~  135 (198)
                      |+|+||||+|+||++++++|+++|++|++++|++.+...   ..+++++.+|++| ++++.++++++|+|||++|...  
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~--   75 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ---YNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGG--   75 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC---CTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTT--
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh---cCCceEEEecccCCHHHHHHHHcCCCEEEECCcCCC--
Confidence            489999999999999999999999999999998654322   2689999999999 9999999999999999999754  


Q ss_pred             ccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCC-------CcchHHHHHHHHHHHHH
Q 029125          136 SYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANY-------LLQGYYEGKRAAETELL  191 (198)
Q Consensus       136 ~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~-------~~~~Y~~sK~~~e~~l~  191 (198)
                      ...+++|+.++.++++++++.++++|||+||.....+.+       +...|+.+|+++|.+++
T Consensus        76 ~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~  138 (219)
T 3dqp_A           76 KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLT  138 (219)
T ss_dssp             SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHH
T ss_pred             CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHH
Confidence            458899999999999999999999999999943222222       26789999999999995

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.93  E-value=9.3e-25  Score=175.95  Aligned_cols=134  Identities=22%  Similarity=0.208  Sum_probs=114.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCC--
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG--  133 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~--  133 (198)
                      +|+|+||||+||||++|+++|+++|++|++++|++.. ..   ..+++++.+|++ .+++.++++++|+|||+|+...  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~---~~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~   76 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGN-KA---INDYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQ   76 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc-cc---CCceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCC
Confidence            5799999999999999999999999999999998332 21   238899999999 9999999999999999999654  


Q ss_pred             CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC----------CCCcchHHHHHHHHHHHHHhhC
Q 029125          134 SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       134 ~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~----------~~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                      .+...+++|+.++.+++++|.+.++++|||+|| .+|+..          ..+.+.|+.+|+++|.+++++.
T Consensus        77 ~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  148 (311)
T 3m2p_A           77 GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYS  148 (311)
T ss_dssp             SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Confidence            456788999999999999999999999999999 566542          2356799999999999998753

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.93  E-value=1.8e-24  Score=179.00  Aligned_cols=140  Identities=23%  Similarity=0.264  Sum_probs=117.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      ..+||+|+||||+||||++++++|+++|++|++++|+...... ....+++++.+|++|.+++.++++++|+|||+|+..
T Consensus        26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~  104 (379)
T 2c5a_A           26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-EDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADM  104 (379)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-GGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCC
T ss_pred             cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchh-hccCCceEEECCCCCHHHHHHHhCCCCEEEECceec
Confidence            3467899999999999999999999999999999998654322 123478999999999999999999999999999964


Q ss_pred             C-------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCC-----------------CCCCcchHHHHHHHHH
Q 029125          133 G-------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGV-----------------ANYLLQGYYEGKRAAE  187 (198)
Q Consensus       133 ~-------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~-----------------~~~~~~~Y~~sK~~~e  187 (198)
                      .       .+...+++|+.++.++++++.+.++++|||+|| .+|+.                 +..+.+.|+.+|+++|
T Consensus       105 ~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E  184 (379)
T 2c5a_A          105 GGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATE  184 (379)
T ss_dssp             CCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHH
T ss_pred             CcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHH
Confidence            3       345567899999999999999999999999999 55653                 2345678999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++.+
T Consensus       185 ~~~~~~  190 (379)
T 2c5a_A          185 ELCKHY  190 (379)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998764

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.93  E-value=4.1e-25  Score=182.05  Aligned_cols=140  Identities=17%  Similarity=0.242  Sum_probs=117.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHC-CCeEEEeecCCCCcccccCCCCeEEEEccCC-CHHHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLL-SSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~-d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      .++|+|+||||+||||++|+++|+++ |++|++++|+..+........+++++.+|++ |.+.+.++++++|+|||+|+.
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~  101 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVAI  101 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBCC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCcc
Confidence            35789999999999999999999998 9999999998765333223468999999999 999999999999999999996


Q ss_pred             CC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC-----------------CCcchHHHHHHHHH
Q 029125          132 FG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN-----------------YLLQGYYEGKRAAE  187 (198)
Q Consensus       132 ~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~-----------------~~~~~Y~~sK~~~e  187 (198)
                      ..      .+...+++|+.++.+++++|++.+ ++|||+|| .+|+...                 .+.+.|+.+|+++|
T Consensus       102 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E  180 (372)
T 3slg_A          102 ATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMD  180 (372)
T ss_dssp             CCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHH
T ss_pred             ccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHH
Confidence            54      334567899999999999999998 89999999 5666421                 34458999999999


Q ss_pred             HHHHhhC
Q 029125          188 TELLTRY  194 (198)
Q Consensus       188 ~~l~~~~  194 (198)
                      .+++++.
T Consensus       181 ~~~~~~~  187 (372)
T 3slg_A          181 RVIWGYG  187 (372)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998874

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.92  E-value=1.3e-24  Score=176.83  Aligned_cols=138  Identities=18%  Similarity=0.162  Sum_probs=111.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCC-
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG-  133 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~-  133 (198)
                      .+|+|+||||+||||++++++|+++|++|++++|+..+... ....+++++.+|++|.+++.++++++|+|||+||... 
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~   90 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR-LAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPS   90 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG-GGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC------
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh-hccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcC
Confidence            44699999999999999999999999999999998654321 1123789999999999999999999999999999643 


Q ss_pred             ---CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCCC-----------C----cchHHHHHHHHHHHHHhh
Q 029125          134 ---SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVANY-----------L----LQGYYEGKRAAETELLTR  193 (198)
Q Consensus       134 ---~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~~-----------~----~~~Y~~sK~~~e~~l~~~  193 (198)
                         .+...+++|+.++.+++++|.+.++++|||+|| .+|+....           +    .+.|+.+|+++|.+++++
T Consensus        91 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~  169 (342)
T 2x4g_A           91 RPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQ  169 (342)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHH
Confidence               446678899999999999999999999999999 55654332           2    678999999999999875

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.92  E-value=1.2e-24  Score=176.31  Aligned_cols=137  Identities=21%  Similarity=0.318  Sum_probs=115.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEccccCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFG  133 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~~  133 (198)
                      ||+|+||||+||||++++++|+++|++|++++|....... ....+++++.+|++|.+.+.++++  ++|+|||+||...
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~   79 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED-AITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSL   79 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG-GSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh-hcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccC
Confidence            5799999999999999999999999999999987544222 223478999999999999999998  8999999999653


Q ss_pred             ------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC----------CCCcchHHHHHHHHHHHHHhh
Q 029125          134 ------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       134 ------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~----------~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                            .+...+++|+.++.+++++|.+.++++|||+|| .+|+..          ..+.+.|+.+|+++|.+++.+
T Consensus        80 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~  156 (330)
T 2c20_A           80 VGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWY  156 (330)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHH
T ss_pred             ccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHH
Confidence                  345678899999999999999999999999999 566642          234679999999999999875

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.92  E-value=3e-24  Score=176.46  Aligned_cols=140  Identities=16%  Similarity=0.159  Sum_probs=116.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHH--CCCeEEEeecCCC------------CcccccCCCCeEEEEccCCCHHHHHHH-
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALD--RGLTVASLSRSGR------------SSLRDSWANNVIWHQGNLLSSDSWKEA-  118 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~--~g~~V~~l~r~~~------------~~~~~~~~~~~~~~~~D~~d~~~~~~~-  118 (198)
                      .++|+|+||||+||||++|+++|++  +|++|++++|...            .........++.++.+|++|++++.++ 
T Consensus         8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   87 (362)
T 3sxp_A            8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLE   87 (362)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHT
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhh
Confidence            4578999999999999999999999  9999999999754            111222244679999999999999998 


Q ss_pred             hcCCCEEEEccccCC----CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC---------CCcchHHHHHH
Q 029125          119 LDGVTAVISCVGGFG----SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN---------YLLQGYYEGKR  184 (198)
Q Consensus       119 ~~~~d~vi~~ag~~~----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~---------~~~~~Y~~sK~  184 (198)
                      ..++|+|||+||...    .+...+++|+.++.++++++++.+++ |||+|| .+|+...         .+.++|+.+|+
T Consensus        88 ~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK~  166 (362)
T 3sxp_A           88 KLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKAPNVVGKNESPENVYGFSKL  166 (362)
T ss_dssp             TSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHHH
T ss_pred             ccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCCCCCCCCCCCCCChhHHHHH
Confidence            789999999999543    44667899999999999999998886 999999 5666432         34567999999


Q ss_pred             HHHHHHHhhC
Q 029125          185 AAETELLTRY  194 (198)
Q Consensus       185 ~~e~~l~~~~  194 (198)
                      ++|.+++.+.
T Consensus       167 ~~E~~~~~~~  176 (362)
T 3sxp_A          167 CMDEFVLSHS  176 (362)
T ss_dssp             HHHHHHHHTT
T ss_pred             HHHHHHHHHh
Confidence            9999999875

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.92  E-value=2.6e-24  Score=175.06  Aligned_cols=140  Identities=21%  Similarity=0.263  Sum_probs=114.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccC-CCCeEEEEccCCCHHHHHHHhcC--CCEEEEcc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSW-ANNVIWHQGNLLSSDSWKEALDG--VTAVISCV  129 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~--~d~vi~~a  129 (198)
                      ..++|+|+||||+||||++++++|+++|++|++++|+......... ..++.++.+|++|++++.+++++  +|+|||+|
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   97 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTA   97 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECc
Confidence            3467899999999999999999999999999999997543221111 15789999999999999999987  99999999


Q ss_pred             ccCCCC---ccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccC----CCC-------CCc-chHHHHHHHHHHHHHh
Q 029125          130 GGFGSN---SYMYKINGTANINAIRAASEKGVKRFVYISA-ADFG----VAN-------YLL-QGYYEGKRAAETELLT  192 (198)
Q Consensus       130 g~~~~~---~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~----~~~-------~~~-~~Y~~sK~~~e~~l~~  192 (198)
                      |.....   +..+++|+.++.++++++.+.++++|||+|| .+|+    ...       .+. +.|+.+|+++|.+++.
T Consensus        98 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~  176 (333)
T 2q1w_A           98 ASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEY  176 (333)
T ss_dssp             CCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHHH
T ss_pred             eecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHHHHh
Confidence            965431   1117899999999999999999999999999 5676    322       345 7999999999999987

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.92  E-value=1.5e-24  Score=177.53  Aligned_cols=139  Identities=22%  Similarity=0.210  Sum_probs=116.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccccc------C----CCCeEEEEccCCCHHHHHHHhcCCCE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS------W----ANNVIWHQGNLLSSDSWKEALDGVTA  124 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~------~----~~~~~~~~~D~~d~~~~~~~~~~~d~  124 (198)
                      .+|+|+||||+||||++++++|+++|++|++++|+........      .    ..++.++.+|++|.+++.++++++|+
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~  105 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY  105 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCE
Confidence            4689999999999999999999999999999999754311100      0    25789999999999999999999999


Q ss_pred             EEEccccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC----------CCcchHHHHHHHHH
Q 029125          125 VISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN----------YLLQGYYEGKRAAE  187 (198)
Q Consensus       125 vi~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~----------~~~~~Y~~sK~~~e  187 (198)
                      |||+||...      .+...+++|+.++.+++++|.+.++++|||+|| .+|+...          .+.+.|+.+|+++|
T Consensus       106 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e  185 (352)
T 1sb8_A          106 VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNE  185 (352)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHH
T ss_pred             EEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHH
Confidence            999999643      345678899999999999999999999999999 5666432          35679999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++.+
T Consensus       186 ~~~~~~  191 (352)
T 1sb8_A          186 LYADVF  191 (352)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998764

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.92  E-value=3.3e-24  Score=174.26  Aligned_cols=141  Identities=21%  Similarity=0.291  Sum_probs=116.3

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEc
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALD--GVTAVISC  128 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~  128 (198)
                      ...++|+|+||||+||||++++++|+++|++|++++|+...... .....++.++.+|++|.+++.++++  ++|+|||+
T Consensus        16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~   95 (330)
T 2pzm_A           16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHS   95 (330)
T ss_dssp             STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEEC
Confidence            34567899999999999999999999999999999996543221 0112578999999999999999998  99999999


Q ss_pred             cccCCC----CccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC----C------CcchHHHHHHHHHHHHHhh
Q 029125          129 VGGFGS----NSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN----Y------LLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       129 ag~~~~----~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~----~------~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ||....    ... +++|+.++.++++++.+.++++|||+|| .+|+...    +      +.+.|+.+|+++|.+++.+
T Consensus        96 A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~  174 (330)
T 2pzm_A           96 AAAYKDPDDWAED-AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMS  174 (330)
T ss_dssp             CCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTC
T ss_pred             CccCCCccccChh-HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHHHHHHHHc
Confidence            996532    112 7899999999999999989999999999 5666542    1      6689999999999999875

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.92  E-value=3.3e-24  Score=173.12  Aligned_cols=136  Identities=15%  Similarity=0.159  Sum_probs=113.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcC--CCEEEEccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG--VTAVISCVG  130 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi~~ag  130 (198)
                      ..++++|+||||+||||++++++|+++|++|++++|+... . . .  ++.++.+|++|++++.+++++  +|+|||+||
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~-~-l--~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~   83 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-K-L-P--NVEMISLDIMDSQRVKKVISDIKPDYIFHLAA   83 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-C-C-T--TEEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-c-c-c--eeeEEECCCCCHHHHHHHHHhcCCCEEEEcCc
Confidence            3467899999999999999999999999999999998654 1 1 1  789999999999999999986  999999999


Q ss_pred             cCC------CCccceehhhHHHHHHHHHHHHc-CCCEEEEeec-cccCCC------------CCCcchHHHHHHHHHHHH
Q 029125          131 GFG------SNSYMYKINGTANINAIRAASEK-GVKRFVYISA-ADFGVA------------NYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       131 ~~~------~~~~~~~~n~~~~~~~~~a~~~~-~~~~~v~~Ss-~~~~~~------------~~~~~~Y~~sK~~~e~~l  190 (198)
                      ...      .+...+++|+.++.+++++|.+. ++++|||+|| .+|+..            ..+.+.|+.+|+++|.++
T Consensus        84 ~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~  163 (321)
T 2pk3_A           84 KSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLA  163 (321)
T ss_dssp             CCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHH
T ss_pred             ccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHH
Confidence            653      45667899999999999999775 5889999999 566643            245679999999999998


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +.+
T Consensus       164 ~~~  166 (321)
T 2pk3_A          164 RQY  166 (321)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.92  E-value=1.4e-23  Score=158.89  Aligned_cols=135  Identities=19%  Similarity=0.188  Sum_probs=113.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCCCCc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS  136 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~  136 (198)
                      |+|+||||+|+||++++++|+++|++|++++|++.+.. .....+++++.+|++|++++.++++++|+|||++|.... .
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~-~   81 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP-SEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND-L   81 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSC-SSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTC-C
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcc-cccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCC-C
Confidence            78999999999999999999999999999999865422 112457899999999999999999999999999997543 2


Q ss_pred             cceehhhHHHHHHHHHHHHcCCCEEEEeecc-ccCCCCC---CcchHHHHHHHHHHHHHhh
Q 029125          137 YMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVANY---LLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       137 ~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~-~~~~~~~---~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ...++|+.++.++++++++.++++||++||. .|+....   +...|+.+|.+.|.++++.
T Consensus        82 ~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~  142 (206)
T 1hdo_A           82 SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRES  142 (206)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHHT
T ss_pred             CccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccccchhHHHHHHHHHHHHHhC
Confidence            3456999999999999999999999999994 4554322   5678999999999998764

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.92  E-value=7.2e-24  Score=172.89  Aligned_cols=137  Identities=18%  Similarity=0.231  Sum_probs=114.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHC--CCeEEEeecCCCCc----ccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDR--GLTVASLSRSGRSS----LRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~--g~~V~~l~r~~~~~----~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      ||+|+||||+||||++++++|+++  |++|++++|.....    .......++.++.+|++|++++.++++++|+|||+|
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   83 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA   83 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence            689999999999999999999998  89999999975321    111113578999999999999999999999999999


Q ss_pred             ccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC----------------------CCCcchHH
Q 029125          130 GGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------------------NYLLQGYY  180 (198)
Q Consensus       130 g~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~----------------------~~~~~~Y~  180 (198)
                      |...      .+...+++|+.++.+++++|.+.++ +|||+|| .+|+..                      ..+.+.|+
T Consensus        84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~  162 (348)
T 1oc2_A           84 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS  162 (348)
T ss_dssp             SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred             cccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCccH
Confidence            9653      4566789999999999999998888 9999999 556532                      23567899


Q ss_pred             HHHHHHHHHHHhh
Q 029125          181 EGKRAAETELLTR  193 (198)
Q Consensus       181 ~sK~~~e~~l~~~  193 (198)
                      .+|+++|.+++.+
T Consensus       163 ~sK~~~e~~~~~~  175 (348)
T 1oc2_A          163 STKAASDLIVKAW  175 (348)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998865

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.92  E-value=9.7e-25  Score=172.37  Aligned_cols=134  Identities=19%  Similarity=0.067  Sum_probs=114.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCC--
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG--  133 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~--  133 (198)
                      |++|+||||+|+||++++++|+++|++|++++|+..+..    ..++.++.+|++|++.+.++++++|+|||+||...  
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~   77 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA----EAHEEIVACDLADAQAVHDLVKDCDGIIHLGGVSVER   77 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC----CTTEEECCCCTTCHHHHHHHHTTCSEEEECCSCCSCC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc----CCCccEEEccCCCHHHHHHHHcCCCEEEECCcCCCCC
Confidence            468999999999999999999999999999999865422    24678999999999999999999999999999642  


Q ss_pred             CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC-----------CCcchHHHHHHHHHHHHHhh
Q 029125          134 SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN-----------YLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       134 ~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~-----------~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      .+...+++|+.++.++++++.+.++++|||+|| .+|+...           .+.+.|+.+|+++|.+++.+
T Consensus        78 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~  149 (267)
T 3ay3_A           78 PWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLY  149 (267)
T ss_dssp             CHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence            345678899999999999999999999999999 5565422           24578999999999998764

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.92  E-value=5.2e-24  Score=173.31  Aligned_cols=139  Identities=24%  Similarity=0.301  Sum_probs=116.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc------cCCCCeEEEEccCCCHHHHHHHhc--CCCEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD------SWANNVIWHQGNLLSSDSWKEALD--GVTAVI  126 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~------~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi  126 (198)
                      .+|+|+||||+||||++++++|+++|++|++++|+.......      ....++.++.+|++|++++.++++  ++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            467999999999999999999999999999999976542211      113578999999999999999998  899999


Q ss_pred             EccccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC----------CCCcchHHHHHHHHHHH
Q 029125          127 SCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYLLQGYYEGKRAAETE  189 (198)
Q Consensus       127 ~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~----------~~~~~~Y~~sK~~~e~~  189 (198)
                      |+||...      .+...+++|+.++.++++++++.++++|||+|| .+|+..          ..+.+.|+.+|+++|.+
T Consensus        84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  163 (341)
T 3enk_A           84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQI  163 (341)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHH
T ss_pred             ECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Confidence            9999643      234678899999999999999999999999999 566543          23457899999999999


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      ++.+
T Consensus       164 ~~~~  167 (341)
T 3enk_A          164 LRDV  167 (341)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.92  E-value=4.4e-24  Score=176.56  Aligned_cols=140  Identities=16%  Similarity=0.128  Sum_probs=115.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCcccccC-CCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSW-ANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      .++|+|+||||+||||++++++|+++| ++|++++|+......... ..+++++.+|++|++.+.++++++|+|||+||.
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~  109 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATY  109 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCC
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCc
Confidence            356899999999999999999999999 999999997654322211 457899999999999999999999999999996


Q ss_pred             CC------CCccceehhhHHHHHHHHHHHHc-CCCEEEEeec-cccCC---------------CC-CCcchHHHHHHHHH
Q 029125          132 FG------SNSYMYKINGTANINAIRAASEK-GVKRFVYISA-ADFGV---------------AN-YLLQGYYEGKRAAE  187 (198)
Q Consensus       132 ~~------~~~~~~~~n~~~~~~~~~a~~~~-~~~~~v~~Ss-~~~~~---------------~~-~~~~~Y~~sK~~~e  187 (198)
                      ..      .+...+++|+.++.+++++|.+. ++++|||+|| .+|+.               +. .+.++|+.+|+++|
T Consensus       110 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E  189 (377)
T 2q1s_A          110 HGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGE  189 (377)
T ss_dssp             SCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHHHHH
T ss_pred             cCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHH
Confidence            53      34567889999999999999998 8999999999 55542               11 45678999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++++
T Consensus       190 ~~~~~~  195 (377)
T 2q1s_A          190 FYSVYY  195 (377)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998865

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.92  E-value=7.3e-25  Score=170.12  Aligned_cols=139  Identities=22%  Similarity=0.270  Sum_probs=113.6

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCe-EEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNV-IWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~-~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ...++|+|+||||+|+||++++++|+++|++|++++|++.+... ....++ +++.+|++  +++.++++++|+|||+||
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~-~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag   93 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE-LRERGASDIVVANLE--EDFSHAFASIDAVVFAAG   93 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHTTCSEEEECCTT--SCCGGGGTTCSEEEECCC
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHH-HHhCCCceEEEcccH--HHHHHHHcCCCEEEECCC
Confidence            34568899999999999999999999999999999998654221 112478 99999998  778888999999999999


Q ss_pred             cCC--CCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCC---CCcchHHHHHHHHHHHHHhh
Q 029125          131 GFG--SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVAN---YLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       131 ~~~--~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~---~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ...  .+...+++|+.++.++++++++.++++||++||.....+.   .+...|+.+|+++|.++++.
T Consensus        94 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~  161 (236)
T 3e8x_A           94 SGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELKRS  161 (236)
T ss_dssp             CCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHHHHC
Confidence            753  4567789999999999999999999999999995332222   46789999999999998843

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.91  E-value=1.1e-23  Score=171.12  Aligned_cols=137  Identities=23%  Similarity=0.285  Sum_probs=114.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHC---C---CeEEEeecCCCCc----cccc-CCCCeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDR---G---LTVASLSRSGRSS----LRDS-WANNVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~---g---~~V~~l~r~~~~~----~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      |+|+||||+||||++++++|+++   |   ++|++++|.....    .... ...+++++.+|++|++.+.+++.++|+|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   80 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence            47999999999999999999997   8   9999999864211    1111 1357899999999999999999999999


Q ss_pred             EEccccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC----------CCCcchHHHHHHHHHH
Q 029125          126 ISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYLLQGYYEGKRAAET  188 (198)
Q Consensus       126 i~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~----------~~~~~~Y~~sK~~~e~  188 (198)
                      ||+||...      ++...+++|+.++.++++++.+.++++|||+|| .+|+..          ..+.+.|+.+|+++|.
T Consensus        81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  160 (337)
T 1r6d_A           81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL  160 (337)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHH
Confidence            99999653      456678999999999999999999999999999 556642          3456789999999999


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++.+
T Consensus       161 ~~~~~  165 (337)
T 1r6d_A          161 VARAY  165 (337)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98764

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.91  E-value=3.1e-24  Score=174.78  Aligned_cols=138  Identities=21%  Similarity=0.307  Sum_probs=113.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc----c-cCCCCeEEEEccCCCHHHHHHHhcC--CCEEEEc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----D-SWANNVIWHQGNLLSSDSWKEALDG--VTAVISC  128 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----~-~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi~~  128 (198)
                      ||+|+||||+||||++++++|+++|++|++++|.......    . ....++.++.+|++|++++.+++++  +|+|||+
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL   80 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence            5789999999999999999999999999999985322110    0 0124589999999999999999988  9999999


Q ss_pred             cccCC------CCccceehhhHHHHHHHHHHHHcCCC-EEEEeec-cccCC--------------------------CCC
Q 029125          129 VGGFG------SNSYMYKINGTANINAIRAASEKGVK-RFVYISA-ADFGV--------------------------ANY  174 (198)
Q Consensus       129 ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~Ss-~~~~~--------------------------~~~  174 (198)
                      ||...      .+...+++|+.++.+++++|.+.+++ +|||+|| .+|+.                          +..
T Consensus        81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~  160 (347)
T 1orr_A           81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD  160 (347)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred             CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCC
Confidence            99643      44567899999999999999998885 9999999 55653                          123


Q ss_pred             CcchHHHHHHHHHHHHHhh
Q 029125          175 LLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       175 ~~~~Y~~sK~~~e~~l~~~  193 (198)
                      +.+.|+.+|+++|.+++++
T Consensus       161 ~~~~Y~~sK~~~E~~~~~~  179 (347)
T 1orr_A          161 FHSPYGCSKGAADQYMLDY  179 (347)
T ss_dssp             CCHHHHHHHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHH
Confidence            5678999999999998875

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.91  E-value=3e-24  Score=174.86  Aligned_cols=140  Identities=16%  Similarity=0.155  Sum_probs=116.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC-------CeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-CCCEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG-------LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-GVTAV  125 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g-------~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-~~d~v  125 (198)
                      .++|+|+||||+||||++++++|+++|       ++|++++|+...... ....++.++.+|++|++++.++++ ++|+|
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~v   90 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-GFSGAVDARAADLSAPGEAEKLVEARPDVI   90 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-TCCSEEEEEECCTTSTTHHHHHHHTCCSEE
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-ccCCceeEEEcCCCCHHHHHHHHhcCCCEE
Confidence            456799999999999999999999999       899999997643221 123568899999999999999984 89999


Q ss_pred             EEccccCC-----CCccceehhhHHHHHHHHHHHHcC-----CCEEEEeec-cccCCCCC----------CcchHHHHHH
Q 029125          126 ISCVGGFG-----SNSYMYKINGTANINAIRAASEKG-----VKRFVYISA-ADFGVANY----------LLQGYYEGKR  184 (198)
Q Consensus       126 i~~ag~~~-----~~~~~~~~n~~~~~~~~~a~~~~~-----~~~~v~~Ss-~~~~~~~~----------~~~~Y~~sK~  184 (198)
                      ||+||...     .+...+++|+.++.++++++.+.+     +++|||+|| .+|+....          +.++|+.+|+
T Consensus        91 ih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~  170 (342)
T 2hrz_A           91 FHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKA  170 (342)
T ss_dssp             EECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHHHHH
T ss_pred             EECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHHHHH
Confidence            99999643     345678999999999999998876     789999999 56765322          6679999999


Q ss_pred             HHHHHHHhhC
Q 029125          185 AAETELLTRY  194 (198)
Q Consensus       185 ~~e~~l~~~~  194 (198)
                      ++|.+++++.
T Consensus       171 ~~e~~~~~~~  180 (342)
T 2hrz_A          171 ICELLLSDYS  180 (342)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999988763

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.91  E-value=7.4e-24  Score=172.82  Aligned_cols=140  Identities=16%  Similarity=0.212  Sum_probs=113.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCcccc-----cCCCCeEEEEccCCCHHHHHHHhcC--CCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRD-----SWANNVIWHQGNLLSSDSWKEALDG--VTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~~-----~~~~~~~~~~~D~~d~~~~~~~~~~--~d~  124 (198)
                      ..+|+|+||||+||||++|+++|+++|  ++|++++|........     ....+++++.+|++|.+.+.+++++  +|+
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~  101 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV  101 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence            457899999999999999999999999  7888888765321111     1125899999999999999999987  999


Q ss_pred             EEEccccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC-----------CCCcchHHHHHHHH
Q 029125          125 VISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA-----------NYLLQGYYEGKRAA  186 (198)
Q Consensus       125 vi~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~-----------~~~~~~Y~~sK~~~  186 (198)
                      |||+||...      .+...+++|+.++.+++++|.+.++++|||+|| .+|+..           ..+.+.|+.+|+++
T Consensus       102 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~  181 (346)
T 4egb_A          102 IVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASA  181 (346)
T ss_dssp             EEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHH
T ss_pred             EEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHH
Confidence            999999643      345678999999999999999999999999999 566643           23457899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      |.+++++
T Consensus       182 E~~~~~~  188 (346)
T 4egb_A          182 DMIALAY  188 (346)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999875

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.91  E-value=8.5e-24  Score=171.71  Aligned_cols=138  Identities=23%  Similarity=0.280  Sum_probs=113.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCC-ccc---cc-CCCCeEEEEccCCCHHHHHHHhcCCCEEEEc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRS-SLR---DS-WANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~-~~~---~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~  128 (198)
                      +|+|+||||+||||++++++|+++|  ++|++++|.... ...   .. ...+++++.+|++|.+.+.+++.++|+|||+
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   82 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHL   82 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEEC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEEC
Confidence            4689999999999999999999986  899999986421 111   11 1347899999999999999999999999999


Q ss_pred             cccCC------CCccceehhhHHHHHHHHHHHHcCC-CEEEEeec-cccCC----------CCCCcchHHHHHHHHHHHH
Q 029125          129 VGGFG------SNSYMYKINGTANINAIRAASEKGV-KRFVYISA-ADFGV----------ANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       129 ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~-~~~v~~Ss-~~~~~----------~~~~~~~Y~~sK~~~e~~l  190 (198)
                      ||...      .+...+++|+.++.+++++|.+.+. ++|||+|| .+|+.          +..+.+.|+.+|+++|.++
T Consensus        83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  162 (336)
T 2hun_A           83 AAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLV  162 (336)
T ss_dssp             CCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHHH
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHHH
Confidence            99653      4566789999999999999988774 79999999 55664          2345679999999999998


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +++
T Consensus       163 ~~~  165 (336)
T 2hun_A          163 LGW  165 (336)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.91  E-value=5.6e-24  Score=171.14  Aligned_cols=134  Identities=22%  Similarity=0.329  Sum_probs=113.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCC---
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG---  133 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~---  133 (198)
                      |+|+||||+||||++|+++|+++|++|++++|....... ....+++++.+|+.|.+ +.+++++ |+|||+|+...   
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~~~~~   77 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRRE-FVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANPEVRL   77 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGG-GSCTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSCSSSG
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchh-hcCCCceEEECccccHH-HHhhcCC-CEEEECCCCCCchh
Confidence            589999999999999999999999999999997655322 22467899999999998 8888888 99999998532   


Q ss_pred             ---CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC----------CCCcchHHHHHHHHHHHHHhh
Q 029125          134 ---SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       134 ---~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~----------~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                         .+...+++|+.++.++++++++.++++|||+|| .+|+..          ..+.+.|+.+|+++|.+++.+
T Consensus        78 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~  151 (312)
T 3ko8_A           78 STTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATY  151 (312)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             hhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence               334567899999999999999999999999999 567542          345689999999999998875

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.91  E-value=1.1e-23  Score=170.94  Aligned_cols=141  Identities=18%  Similarity=0.168  Sum_probs=113.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc----ccc-CCCCeEEEEccCCCHHHHHHHhcC--CCEE
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL----RDS-WANNVIWHQGNLLSSDSWKEALDG--VTAV  125 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~----~~~-~~~~~~~~~~D~~d~~~~~~~~~~--~d~v  125 (198)
                      +.++++||||||+||||++++++|+++|++|++++|+.....    ... ...++.++.+|++|.+++.+++++  +|+|
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V   90 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEV   90 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEE
Confidence            456789999999999999999999999999999999865421    010 124688999999999999999885  7999


Q ss_pred             EEccccCC------CCccceehhhHHHHHHHHHHHHcCC-CEEEEeec-cccCCCC----------CCcchHHHHHHHHH
Q 029125          126 ISCVGGFG------SNSYMYKINGTANINAIRAASEKGV-KRFVYISA-ADFGVAN----------YLLQGYYEGKRAAE  187 (198)
Q Consensus       126 i~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~-~~~v~~Ss-~~~~~~~----------~~~~~Y~~sK~~~e  187 (198)
                      ||+||...      .+...+++|+.++.++++++.+.++ ++|||+|| .+|+...          .+.+.|+.+|+++|
T Consensus        91 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e  170 (335)
T 1rpn_A           91 YNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGH  170 (335)
T ss_dssp             EECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             EECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHH
Confidence            99999643      3456788999999999999999886 89999999 5565422          34568999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++++
T Consensus       171 ~~~~~~  176 (335)
T 1rpn_A          171 WITVNY  176 (335)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998865

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.91  E-value=1.4e-23  Score=171.95  Aligned_cols=139  Identities=18%  Similarity=0.163  Sum_probs=114.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc----cCCCCeEEEEccCCCHHHHHHHhcC--CCEEEEc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD----SWANNVIWHQGNLLSSDSWKEALDG--VTAVISC  128 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi~~  128 (198)
                      ++|+|+||||+||||++|+++|+++|++|++++|+.......    ....++.++.+|++|++++.+++++  +|+|||+
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   87 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM   87 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEEC
Confidence            467999999999999999999999999999999976542211    0135789999999999999999986  8999999


Q ss_pred             cccC------CCCccceehhhHHHHHHHHHHHHcC-CCEEEEeec-cccCCC-----------CCCcchHHHHHHHHHHH
Q 029125          129 VGGF------GSNSYMYKINGTANINAIRAASEKG-VKRFVYISA-ADFGVA-----------NYLLQGYYEGKRAAETE  189 (198)
Q Consensus       129 ag~~------~~~~~~~~~n~~~~~~~~~a~~~~~-~~~~v~~Ss-~~~~~~-----------~~~~~~Y~~sK~~~e~~  189 (198)
                      ||..      ..+...+++|+.++.+++++|.+.+ +++|||+|| .+|+..           ..+.+.|+.+|+++|.+
T Consensus        88 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~  167 (357)
T 1rkx_A           88 AAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELV  167 (357)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHH
T ss_pred             CCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHH
Confidence            9853      2345678899999999999998876 889999999 556532           23567899999999999


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      ++.+
T Consensus       168 ~~~~  171 (357)
T 1rkx_A          168 TSSY  171 (357)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8765

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.91  E-value=4.8e-24  Score=171.81  Aligned_cols=136  Identities=21%  Similarity=0.298  Sum_probs=110.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC---
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF---  132 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~---  132 (198)
                      ||+|+||||+||||++|+++|+++| ++++++++..... .....++.++.+|++| +++.++++++|+|||+|+..   
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~-~~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~~~~   77 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNE-EFVNEAARLVKADLAA-DDIKDYLKGAEEVWHIAANPDVR   77 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCG-GGSCTTEEEECCCTTT-SCCHHHHTTCSEEEECCCCCCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCCh-hhcCCCcEEEECcCCh-HHHHHHhcCCCEEEECCCCCChh
Confidence            5789999999999999999999999 5556655433322 2224678999999999 88999999999999999853   


Q ss_pred             ---CCCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCC----------CCCCcchHHHHHHHHHHHHHhhC
Q 029125          133 ---GSNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGV----------ANYLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       133 ---~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~----------~~~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                         ..+...+++|+.++.++++++.+.++++|||+|| .+|+.          +..+.+.|+.+|+++|.+++.+.
T Consensus        78 ~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~  153 (313)
T 3ehe_A           78 IGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYC  153 (313)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence               2345678899999999999999999999999999 56753          33456789999999999998753

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.91  E-value=1.7e-23  Score=170.70  Aligned_cols=138  Identities=23%  Similarity=0.306  Sum_probs=114.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC------cccc------cCCCCeEEEEccCCCHHHHHHHhc--C
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS------SLRD------SWANNVIWHQGNLLSSDSWKEALD--G  121 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~------~~~~------~~~~~~~~~~~D~~d~~~~~~~~~--~  121 (198)
                      +|+|+||||+||||++++++|+++|++|++++|....      ....      ....++.++.+|++|.+++.++++  +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            4799999999999999999999999999999986432      1100      013478999999999999999998  8


Q ss_pred             CCEEEEccccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC----------CCC-cchHHHHH
Q 029125          122 VTAVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYL-LQGYYEGK  183 (198)
Q Consensus       122 ~d~vi~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~----------~~~-~~~Y~~sK  183 (198)
                      +|+|||+||...      .+...+++|+.++.++++++++.++++|||+|| .+|+..          ..+ .+.|+.+|
T Consensus        82 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK  161 (348)
T 1ek6_A           82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSK  161 (348)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHH
T ss_pred             CCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHH
Confidence            999999999643      345678899999999999999999999999999 566632          223 67899999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      +++|.+++.+
T Consensus       162 ~~~e~~~~~~  171 (348)
T 1ek6_A          162 FFIEEMIRDL  171 (348)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998875

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.91  E-value=1.1e-23  Score=171.27  Aligned_cols=138  Identities=15%  Similarity=0.132  Sum_probs=114.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc----cc-CCCCeEEEEccCCCHHHHHHHhcC--CCEEEEc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DS-WANNVIWHQGNLLSSDSWKEALDG--VTAVISC  128 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----~~-~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi~~  128 (198)
                      +|+|+||||+||||++++++|+++|++|++++|+..+...    .. ...+++++.+|++|.+++.+++++  +|+|||+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   82 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNL   82 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence            5799999999999999999999999999999998654211    10 124689999999999999999885  6999999


Q ss_pred             cccCC------CCccceehhhHHHHHHHHHHHHcCC-CEEEEeec-cccCC----------CCCCcchHHHHHHHHHHHH
Q 029125          129 VGGFG------SNSYMYKINGTANINAIRAASEKGV-KRFVYISA-ADFGV----------ANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       129 ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~-~~~v~~Ss-~~~~~----------~~~~~~~Y~~sK~~~e~~l  190 (198)
                      ||...      .+...+++|+.++.+++++|.+.++ ++|||+|| .+||.          +..+.+.|+.+|+++|.++
T Consensus        83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~  162 (345)
T 2z1m_A           83 AAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWIT  162 (345)
T ss_dssp             CCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHHH
Confidence            99642      3456789999999999999998886 89999999 55653          2345678999999999998


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +.+
T Consensus       163 ~~~  165 (345)
T 2z1m_A          163 VNY  165 (345)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            765

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.91  E-value=2.2e-23  Score=173.01  Aligned_cols=138  Identities=21%  Similarity=0.263  Sum_probs=113.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHH-HCCCeEEEeecCCCCc--------cccc------C-----CCC---eEEEEccCCCH
Q 029125           56 SEKLLVLGGNGFVGSHICREAL-DRGLTVASLSRSGRSS--------LRDS------W-----ANN---VIWHQGNLLSS  112 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~-~~g~~V~~l~r~~~~~--------~~~~------~-----~~~---~~~~~~D~~d~  112 (198)
                      +|+|+||||+||||++++++|+ ++|++|++++|.....        ....      .     ..+   +.++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3689999999999999999999 9999999999875432        1110      0     124   89999999999


Q ss_pred             HHHHHHhc--C-CCEEEEccccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC---------
Q 029125          113 DSWKEALD--G-VTAVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN---------  173 (198)
Q Consensus       113 ~~~~~~~~--~-~d~vi~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~---------  173 (198)
                      +.+.++++  + +|+|||+||...      .+...+++|+.++.+++++|.+.++++|||+|| .+|+...         
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~  161 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccccccc
Confidence            99999987  6 999999999653      345678999999999999999999999999999 5565433         


Q ss_pred             --------CCcchHHHHHHHHHHHHHhh
Q 029125          174 --------YLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       174 --------~~~~~Y~~sK~~~e~~l~~~  193 (198)
                              .+.+.|+.+|+++|.+++.+
T Consensus       162 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~  189 (397)
T 1gy8_A          162 PIDINAKKSPESPYGESKLIAERMIRDC  189 (397)
T ss_dssp             CBCTTSCCBCSSHHHHHHHHHHHHHHHH
T ss_pred             CcCccCCCCCCCchHHHHHHHHHHHHHH
Confidence                    23678999999999998875

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.90  E-value=1.2e-23  Score=173.79  Aligned_cols=137  Identities=18%  Similarity=0.185  Sum_probs=112.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc----ccccC------CC-CeEEEEccCCCHHHHHHHhcC--CC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS----LRDSW------AN-NVIWHQGNLLSSDSWKEALDG--VT  123 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~----~~~~~------~~-~~~~~~~D~~d~~~~~~~~~~--~d  123 (198)
                      ++|+||||+||||++++++|+++|++|++++|+....    .....      .. ++.++.+|++|.+++.+++++  +|
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  108 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD  108 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence            7999999999999999999999999999999976541    11110      12 788999999999999999885  69


Q ss_pred             EEEEccccCC------CCccceehhhHHHHHHHHHHHHcCCC-----EEEEeec-cccCC---------CCCCcchHHHH
Q 029125          124 AVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVK-----RFVYISA-ADFGV---------ANYLLQGYYEG  182 (198)
Q Consensus       124 ~vi~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~-----~~v~~Ss-~~~~~---------~~~~~~~Y~~s  182 (198)
                      +|||+||...      .+...+++|+.++.+++++|.+.+++     +|||+|| .+|+.         +..+.+.|+.+
T Consensus       109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~~s  188 (381)
T 1n7h_A          109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAAS  188 (381)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchHHH
Confidence            9999999653      34567889999999999999887665     9999999 56764         23556799999


Q ss_pred             HHHHHHHHHhh
Q 029125          183 KRAAETELLTR  193 (198)
Q Consensus       183 K~~~e~~l~~~  193 (198)
                      |+++|.+++.+
T Consensus       189 K~~~E~~~~~~  199 (381)
T 1n7h_A          189 KCAAHWYTVNY  199 (381)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999998765

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.90  E-value=1.3e-23  Score=172.15  Aligned_cols=139  Identities=18%  Similarity=0.211  Sum_probs=116.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHC-CC-eEEEeecCCCCccc---ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDR-GL-TVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~-g~-~V~~l~r~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      +.++|+|+||||+|+||++++++|+++ |+ +|++++|++.+...   .....++.++.+|++|.+.+.++++++|+|||
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih   97 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIH   97 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence            346789999999999999999999999 97 99999997543211   11135789999999999999999999999999


Q ss_pred             ccccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhhC
Q 029125          128 CVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       128 ~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                      +||...      .+...+++|+.|+.++++++.+.++++||++||..   ...+.+.|+.+|+++|.+++.+.
T Consensus        98 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~---~~~p~~~Y~~sK~~~E~~~~~~~  167 (344)
T 2gn4_A           98 AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDK---AANPINLYGATKLCSDKLFVSAN  167 (344)
T ss_dssp             CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGG---GSSCCSHHHHHHHHHHHHHHHGG
T ss_pred             CCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCc---cCCCccHHHHHHHHHHHHHHHHH
Confidence            998643      23567899999999999999999999999999942   22356799999999999998764

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.90  E-value=9.3e-24  Score=168.20  Aligned_cols=131  Identities=18%  Similarity=0.179  Sum_probs=109.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcC-CCEEEEccccCC-
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG-VTAVISCVGGFG-  133 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-~d~vi~~ag~~~-  133 (198)
                      +|+|+||| +||||++|+++|+++|++|++++|+....     ..+++++.+|++|.+.+.+++++ +|+|||+|+... 
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~~   76 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----PAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASEY   76 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHHH
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----ccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCCC
Confidence            57899999 59999999999999999999999986542     46789999999999999999987 999999998643 


Q ss_pred             CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC----------CCCcchHHHHHHHHHHHHHhh
Q 029125          134 SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       134 ~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~----------~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      .+...+++|+.++.+++++|.+.++++|||+|| .+|+..          ..+.+.|+.+|+++|.+ +++
T Consensus        77 ~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~  146 (286)
T 3gpi_A           77 SDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA  146 (286)
T ss_dssp             C-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc
Confidence            456778999999999999999989999999999 566643          23467999999999998 654

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.90  E-value=9.1e-24  Score=164.19  Aligned_cols=135  Identities=19%  Similarity=0.242  Sum_probs=113.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      ++|+|+||||+|+||++++++|+++|+  +|++++|++.+.... ...++.++.+|++|++++.++++++|+||||||..
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~   95 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-AYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT   95 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-GGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccc-ccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence            357999999999999999999999999  999999986543211 12468899999999999999999999999999964


Q ss_pred             C---CCccceehhhHHHHHHHHHHHHcCCCEEEEeecc-ccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          133 G---SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       133 ~---~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~-~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      .   .++..+++|+.++.++++++.+.++++||++||. +++   .+...|+.+|+++|.++++.
T Consensus        96 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~---~~~~~Y~~sK~~~e~~~~~~  157 (242)
T 2bka_A           96 RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK---SSNFLYLQVKGEVEAKVEEL  157 (242)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT---TCSSHHHHHHHHHHHHHHTT
T ss_pred             cccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCC---CCcchHHHHHHHHHHHHHhc
Confidence            2   2356678999999999999999999999999994 443   34568999999999999875

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.90  E-value=6.3e-24  Score=170.69  Aligned_cols=135  Identities=16%  Similarity=0.177  Sum_probs=113.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHC--CCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEcccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDR--GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGG  131 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~  131 (198)
                      +|+|+||||+||||++++++|+++  |++|++++|+.....   ...+++++.+|++|.+++.++++  ++|+|||+||.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~   78 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD---VVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAAL   78 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH---HHHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc---ccCCCceEEecCCCHHHHHHHHhhcCCCEEEECCcc
Confidence            478999999999999999999999  899999999765421   12357899999999999999998  89999999986


Q ss_pred             CC-----CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC-----------CCCcchHHHHHHHHHHHHHhh
Q 029125          132 FG-----SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA-----------NYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       132 ~~-----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~-----------~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ..     .+...+++|+.++.++++++.+.++++|||+|| .+|+..           ..+.++|+.+|+++|.+++.+
T Consensus        79 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~  157 (312)
T 2yy7_A           79 LSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYY  157 (312)
T ss_dssp             CHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHH
T ss_pred             CCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHH
Confidence            42     345678899999999999999999999999999 556542           234678999999999998765

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.90  E-value=3.8e-23  Score=168.17  Aligned_cols=136  Identities=18%  Similarity=0.239  Sum_probs=110.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHC-CCeEEEeecCCCCcccccCCCCeEEEEccCCC-HHHHHHHhcCCCEEEEccccCC-
Q 029125           57 EKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLS-SDSWKEALDGVTAVISCVGGFG-  133 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~d~vi~~ag~~~-  133 (198)
                      |+|+||||+||||++++++|+++ |++|++++|+..+........+++++.+|++| .+.+.++++++|+|||+||... 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~~   80 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP   80 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccCc
Confidence            58999999999999999999998 89999999986543222223578999999998 4668888999999999998643 


Q ss_pred             -----CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC-----------------CCcchHHHHHHHHHHHH
Q 029125          134 -----SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN-----------------YLLQGYYEGKRAAETEL  190 (198)
Q Consensus       134 -----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~-----------------~~~~~Y~~sK~~~e~~l  190 (198)
                           .+...+++|+.++.+++++|.+.+ ++|||+|| .+|+...                 .+.+.|+.+|+++|.++
T Consensus        81 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~  159 (345)
T 2bll_A           81 IEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI  159 (345)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHH
T ss_pred             cchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHH
Confidence                 334567899999999999999888 89999999 5565321                 12348999999999998


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +.+
T Consensus       160 ~~~  162 (345)
T 2bll_A          160 WAY  162 (345)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.90  E-value=4e-24  Score=173.61  Aligned_cols=140  Identities=25%  Similarity=0.329  Sum_probs=113.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--c----cCCCCeEEE-EccCCCHHHHHHHhcCCCEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D----SWANNVIWH-QGNLLSSDSWKEALDGVTAVI  126 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~----~~~~~~~~~-~~D~~d~~~~~~~~~~~d~vi  126 (198)
                      .++++|+||||+||||++++++|+++|++|++++|+..+...  .    ....+++++ .+|++|.+++.++++++|+||
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   88 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA   88 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence            457899999999999999999999999999999997543110  0    012568888 899999999999999999999


Q ss_pred             EccccCC---CCccceehhhHHHHHHHHHHHH-cCCCEEEEeec-cccCCCC----------------------------
Q 029125          127 SCVGGFG---SNSYMYKINGTANINAIRAASE-KGVKRFVYISA-ADFGVAN----------------------------  173 (198)
Q Consensus       127 ~~ag~~~---~~~~~~~~n~~~~~~~~~a~~~-~~~~~~v~~Ss-~~~~~~~----------------------------  173 (198)
                      |+||...   .+...+++|+.++.+++++|.+ .++++|||+|| .+|+.+.                            
T Consensus        89 h~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~  168 (342)
T 1y1p_A           89 HIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESD  168 (342)
T ss_dssp             ECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTS
T ss_pred             EeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccccccc
Confidence            9999653   3456788999999999999984 67899999999 4554221                            


Q ss_pred             --CCcchHHHHHHHHHHHHHhh
Q 029125          174 --YLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       174 --~~~~~Y~~sK~~~e~~l~~~  193 (198)
                        .+.+.|+.+|+++|.+++.+
T Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~  190 (342)
T 1y1p_A          169 PQKSLWVYAASKTEAELAAWKF  190 (342)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHHHHH
Confidence              23468999999999998765

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.90  E-value=3.7e-23  Score=166.47  Aligned_cols=136  Identities=26%  Similarity=0.349  Sum_probs=112.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEccccCC-
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFG-  133 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~~-  133 (198)
                      |+|+||||+||||++++++|+++|++|++++|....... ....++.++.+|++|++++.++++  ++|+|||+|+... 
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~   79 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE-NVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASV   79 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG-GSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh-hcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCc
Confidence            479999999999999999999999999999985433221 122467899999999999999998  8999999998643 


Q ss_pred             -----CCccceehhhHHHHHHHHHHHHcCCCEEEEeecc--ccCC-C----------CCCcchHHHHHHHHHHHHHhh
Q 029125          134 -----SNSYMYKINGTANINAIRAASEKGVKRFVYISAA--DFGV-A----------NYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       134 -----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~--~~~~-~----------~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                           ++...+++|+.++.+++++|.+.++++|||+||.  +|+. .          ..+.+.|+.+|+++|.+++.+
T Consensus        80 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~  157 (311)
T 2p5y_A           80 KVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVY  157 (311)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence                 3456788999999999999999899999999995  3553 1          134678999999999998764

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.90  E-value=7e-23  Score=167.83  Aligned_cols=137  Identities=19%  Similarity=0.255  Sum_probs=113.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHC-CCeEEEeecCCCC-ccc---cc-CCCCeEEEEccCCCHHHHHHHhc--CCCEEEEc
Q 029125           57 EKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRS-SLR---DS-WANNVIWHQGNLLSSDSWKEALD--GVTAVISC  128 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~r~~~~-~~~---~~-~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~  128 (198)
                      |+|+||||+||||++++++|+++ |++|++++|.... ...   .. ...+++++.+|++|.+++.++++  ++|+|||+
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence            47999999999999999999998 7999999986521 111   11 13478999999999999999998  89999999


Q ss_pred             cccCC------CCccceehhhHHHHHHHHHHHHc--CCC-------EEEEeec-cccCCC--------------------
Q 029125          129 VGGFG------SNSYMYKINGTANINAIRAASEK--GVK-------RFVYISA-ADFGVA--------------------  172 (198)
Q Consensus       129 ag~~~------~~~~~~~~n~~~~~~~~~a~~~~--~~~-------~~v~~Ss-~~~~~~--------------------  172 (198)
                      ||...      .+...+++|+.++.+++++|.+.  +++       +|||+|| .+|+..                    
T Consensus        81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~  160 (361)
T 1kew_A           81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCC
Confidence            99653      45667899999999999999988  877       9999999 456532                    


Q ss_pred             CCCcchHHHHHHHHHHHHHhh
Q 029125          173 NYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       173 ~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ..+.+.|+.+|+++|.+++.+
T Consensus       161 ~~~~~~Y~~sK~~~e~~~~~~  181 (361)
T 1kew_A          161 YAPSSPYSASKASSDHLVRAW  181 (361)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHH
T ss_pred             CCCCCccHHHHHHHHHHHHHH
Confidence            245678999999999998875

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=6.9e-23  Score=168.99  Aligned_cols=137  Identities=20%  Similarity=0.230  Sum_probs=112.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc----cccc-------CCCCeEEEEccCCCHHHHHHHhcC--CC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS----LRDS-------WANNVIWHQGNLLSSDSWKEALDG--VT  123 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~----~~~~-------~~~~~~~~~~D~~d~~~~~~~~~~--~d  123 (198)
                      ++|+||||+||||++++++|+++|++|++++|+....    ....       ...++.++.+|++|++++.+++++  +|
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  104 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT  104 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence            7899999999999999999999999999999976431    1111       124688999999999999999885  79


Q ss_pred             EEEEccccCC------CCccceehhhHHHHHHHHHHHHcCC---CEEEEeec-cccCCC----------CCCcchHHHHH
Q 029125          124 AVISCVGGFG------SNSYMYKINGTANINAIRAASEKGV---KRFVYISA-ADFGVA----------NYLLQGYYEGK  183 (198)
Q Consensus       124 ~vi~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~---~~~v~~Ss-~~~~~~----------~~~~~~Y~~sK  183 (198)
                      +|||+||...      .+...+++|+.++.++++++.+.++   ++|||+|| .+|+..          ..+.+.|+.+|
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK  184 (375)
T 1t2a_A          105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAK  184 (375)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred             EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHH
Confidence            9999999643      3455788999999999999999887   79999999 566642          23567899999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      +++|.+++.+
T Consensus       185 ~~~e~~~~~~  194 (375)
T 1t2a_A          185 LYAYWIVVNF  194 (375)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.90  E-value=1.7e-23  Score=170.15  Aligned_cols=139  Identities=22%  Similarity=0.317  Sum_probs=109.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc--cc--cCC---CCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RD--SWA---NNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~--~~--~~~---~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      ++++||||||+||||++++++|+++|++|++++|+.....  ..  ...   .+++++.+|++|.+++.++++++|+|||
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   83 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH   83 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence            4689999999999999999999999999999999765310  00  011   2578999999999999999999999999


Q ss_pred             ccccCCCC-----ccceehhhHHHHHHHHHHHHcC-CCEEEEeeccc--cCCCC--------------------CCcchH
Q 029125          128 CVGGFGSN-----SYMYKINGTANINAIRAASEKG-VKRFVYISAAD--FGVAN--------------------YLLQGY  179 (198)
Q Consensus       128 ~ag~~~~~-----~~~~~~n~~~~~~~~~a~~~~~-~~~~v~~Ss~~--~~~~~--------------------~~~~~Y  179 (198)
                      +|+.....     ...+++|+.++.+++++|.+.+ +++|||+||..  |+...                    .+.++|
T Consensus        84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  163 (337)
T 2c29_D           84 VATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMY  163 (337)
T ss_dssp             CCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred             eccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchH
Confidence            99865321     1367899999999999999887 89999999943  33211                    133479


Q ss_pred             HHHHHHHHHHHHhh
Q 029125          180 YEGKRAAETELLTR  193 (198)
Q Consensus       180 ~~sK~~~e~~l~~~  193 (198)
                      +.+|.++|.++.++
T Consensus       164 ~~sK~~~E~~~~~~  177 (337)
T 2c29_D          164 FVSKTLAEQAAWKY  177 (337)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999988764

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.90  E-value=3.8e-23  Score=166.61  Aligned_cols=130  Identities=20%  Similarity=0.237  Sum_probs=110.6

Q ss_pred             eEEEEcCCchhHHHHHHHHHHC--CCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEccccCC
Q 029125           58 KLLVLGGNGFVGSHICREALDR--GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFG  133 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~~  133 (198)
                      +|+||||+||||++++++|+++  |++|++++|+....      .++.++.+|++|++++.++++  ++|+|||+|+...
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~   74 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT------GGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILS   74 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC------TTCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCH
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc------cCceEEEecCCCHHHHHHHHhhcCCcEEEECCcccC
Confidence            5899999999999999999998  89999999875432      156789999999999999998  8999999998642


Q ss_pred             -----CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC-----------CCcchHHHHHHHHHHHHHhh
Q 029125          134 -----SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN-----------YLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       134 -----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~-----------~~~~~Y~~sK~~~e~~l~~~  193 (198)
                           .+...+++|+.++.++++++.+.++++|||+|| .+|+...           .+.+.|+.+|+++|.+++.+
T Consensus        75 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~  151 (317)
T 3ajr_A           75 AKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYY  151 (317)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             CccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHHHHH
Confidence                 345678899999999999999999999999999 5566421           24679999999999988764

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.90  E-value=9.1e-23  Score=165.86  Aligned_cols=137  Identities=24%  Similarity=0.321  Sum_probs=110.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc------cCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD------SWANNVIWHQGNLLSSDSWKEALD--GVTAVISC  128 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~------~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~  128 (198)
                      |+|+||||+||||++++++|+++|++|++++|........      ....++.++.+|++|++++.++++  ++|+|||+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            4799999999999999999999999999998753321110      012467899999999999999887  59999999


Q ss_pred             cccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC----------C-CCcchHHHHHHHHHHHH
Q 029125          129 VGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------N-YLLQGYYEGKRAAETEL  190 (198)
Q Consensus       129 ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~----------~-~~~~~Y~~sK~~~e~~l  190 (198)
                      ||...      .+...+++|+.++.++++++++.++++|||+|| .+|+..          . ++.+.|+.+|+++|.++
T Consensus        81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~  160 (338)
T 1udb_A           81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHH
Confidence            98643      234568899999999999999889999999999 556532          1 22678999999999998


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       161 ~~~  163 (338)
T 1udb_A          161 TDL  163 (338)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.89  E-value=2.8e-23  Score=172.61  Aligned_cols=140  Identities=14%  Similarity=0.189  Sum_probs=111.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc-------------------c---ccCCCCeEEEEccCCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-------------------R---DSWANNVIWHQGNLLS  111 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~-------------------~---~~~~~~~~~~~~D~~d  111 (198)
                      ..+++||||||+||||++|+++|+++|++|++++|......                   .   .....+++++.+|++|
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d   88 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   88 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence            46789999999999999999999999999999988532110                   0   0113578999999999


Q ss_pred             HHHHHHHhcC--CCEEEEccccCCC------C---ccceehhhHHHHHHHHHHHHcCC-CEEEEeec-cccCC-------
Q 029125          112 SDSWKEALDG--VTAVISCVGGFGS------N---SYMYKINGTANINAIRAASEKGV-KRFVYISA-ADFGV-------  171 (198)
Q Consensus       112 ~~~~~~~~~~--~d~vi~~ag~~~~------~---~~~~~~n~~~~~~~~~a~~~~~~-~~~v~~Ss-~~~~~-------  171 (198)
                      ++++.+++++  +|+|||+||....      +   ...+++|+.++.+++++|.+.++ ++|||+|| .+|+.       
T Consensus        89 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~E  168 (404)
T 1i24_A           89 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEE  168 (404)
T ss_dssp             HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCS
T ss_pred             HHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCCCCCCc
Confidence            9999999987  9999999986431      1   12568999999999999998887 59999999 55663       


Q ss_pred             ----------------CCCCcchHHHHHHHHHHHHHhh
Q 029125          172 ----------------ANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       172 ----------------~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                                      +..+.++|+.+|+++|.+++.+
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~  206 (404)
T 1i24_A          169 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFT  206 (404)
T ss_dssp             SEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccCCCCCCChhHHHHHHHHHHHHHH
Confidence                            2334678999999999988765

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.89  E-value=8.2e-23  Score=168.03  Aligned_cols=138  Identities=20%  Similarity=0.209  Sum_probs=109.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc----cccc------CCCCeEEEEccCCCHHHHHHHhcC--CC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS----LRDS------WANNVIWHQGNLLSSDSWKEALDG--VT  123 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~----~~~~------~~~~~~~~~~D~~d~~~~~~~~~~--~d  123 (198)
                      ||+|+||||+||||++++++|+++|++|++++|+....    ....      ...++.++.+|++|.+++.+++++  +|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            57899999999999999999999999999999975431    1110      124688999999999999999885  79


Q ss_pred             EEEEccccCC------CCccceehhhHHHHHHHHHHHHcCC---CEEEEeec-cccCCC----------CCCcchHHHHH
Q 029125          124 AVISCVGGFG------SNSYMYKINGTANINAIRAASEKGV---KRFVYISA-ADFGVA----------NYLLQGYYEGK  183 (198)
Q Consensus       124 ~vi~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~---~~~v~~Ss-~~~~~~----------~~~~~~Y~~sK  183 (198)
                      +|||+||...      .+...+++|+.++.++++++.+.++   ++|||+|| .+|+..          ..+.+.|+.+|
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK  160 (372)
T 1db3_A           81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK  160 (372)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHH
Confidence            9999999643      2234568999999999999999887   79999999 556542          23467899999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      +++|.+++.+
T Consensus       161 ~~~e~~~~~~  170 (372)
T 1db3_A          161 LYAYWITVNY  170 (372)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998764

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.89  E-value=8.8e-23  Score=159.00  Aligned_cols=137  Identities=21%  Similarity=0.240  Sum_probs=110.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHC--CCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDR--GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      ++++|+||||+|+||++++++|+++  |++|++++|++.+.. . ...++.++.+|++|.+++.++++++|+|||++|..
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~-~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~   80 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-K-IGGEADVFIGDITDADSINPAFQGIDALVILTSAV   80 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHH-H-TTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchh-h-cCCCeeEEEecCCCHHHHHHHHcCCCEEEEecccc
Confidence            4689999999999999999999999  899999999754321 1 13568899999999999999999999999999854


Q ss_pred             CC------------Cc-------cceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCc-----chHHHHHHHHHH
Q 029125          133 GS------------NS-------YMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLL-----QGYYEGKRAAET  188 (198)
Q Consensus       133 ~~------------~~-------~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~-----~~Y~~sK~~~e~  188 (198)
                      ..            ..       ..+++|+.++.++++++++.++++|||+||.....+..+.     +.|+.+|+++|.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~  160 (253)
T 1xq6_A           81 PKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQ  160 (253)
T ss_dssp             CEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHH
T ss_pred             ccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCCccccccchhHHHHHHHHHH
Confidence            21            11       2358999999999999999999999999995322222232     346679999999


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      ++++.
T Consensus       161 ~~~~~  165 (253)
T 1xq6_A          161 YLADS  165 (253)
T ss_dssp             HHHTS
T ss_pred             HHHhC
Confidence            98763

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.89  E-value=4e-23  Score=166.41  Aligned_cols=128  Identities=20%  Similarity=0.272  Sum_probs=87.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcC--CCEEEEccccCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG--VTAVISCVGGFG  133 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi~~ag~~~  133 (198)
                      +|+|+||||+||||++++++|+++|++|++++|+...       .+  ++.+|++|++++.+++++  +|+|||+||...
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~   72 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERR   72 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------CHHHHHHHCCSEEEECC----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-------CC--eEEecCCCHHHHHHHHHhhCCCEEEECCcccC
Confidence            4789999999999999999999999999999986533       12  788999999999998875  999999998642


Q ss_pred             ------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCC---------CCCCcchHHHHHHHHHHHHHhh
Q 029125          134 ------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGV---------ANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       134 ------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~---------~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                            .+...+++|+.++.++++++.+.++ +|||+|| .+|+.         +..+.+.|+.+|+++|.+++++
T Consensus        73 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~  147 (315)
T 2ydy_A           73 PDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLEN  147 (315)
T ss_dssp             ---------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             hhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence                  4566789999999999999998887 9999999 55654         1345678999999999999876

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.89  E-value=5.2e-23  Score=164.12  Aligned_cols=124  Identities=21%  Similarity=0.224  Sum_probs=106.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~  131 (198)
                      ...++|+||||+||||++++++|+++|++|++++|+                .+|++|.+++.++++  ++|+|||+||.
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------~~Dl~d~~~~~~~~~~~~~d~vih~A~~   73 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------DLDITNVLAVNKFFNEKKPNVVINCAAH   73 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------TCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------cCCCCCHHHHHHHHHhcCCCEEEECCcc
Confidence            456899999999999999999999999999999985                269999999999998  79999999996


Q ss_pred             CC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC----------CCcchHHHHHHHHHHHHHhhC
Q 029125          132 FG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN----------YLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       132 ~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~----------~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                      ..      .+...+++|+.++.+++++|.+.++ +|||+|| .+|+...          .+.+.|+.+|+++|.+++++.
T Consensus        74 ~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~  152 (292)
T 1vl0_A           74 TAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALN  152 (292)
T ss_dssp             CCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHC
T ss_pred             CCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhhC
Confidence            43      3456789999999999999999888 9999999 5565432          246789999999999998763

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.89  E-value=6.5e-23  Score=165.44  Aligned_cols=138  Identities=22%  Similarity=0.357  Sum_probs=106.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeec-CCCC--ccc--ccCC---CCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSR-SGRS--SLR--DSWA---NNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r-~~~~--~~~--~~~~---~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      +|+|+||||+||||++++++|+++|++|++++| ++..  ...  ....   .++.++.+|++|++++.++++++|+|||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   80 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH   80 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence            478999999999999999999999999999998 5422  110  0011   2578899999999999999999999999


Q ss_pred             ccccCCC-----CccceehhhHHHHHHHHHHHHc-CCCEEEEeeccc--cCCCCC-------------------Cc-chH
Q 029125          128 CVGGFGS-----NSYMYKINGTANINAIRAASEK-GVKRFVYISAAD--FGVANY-------------------LL-QGY  179 (198)
Q Consensus       128 ~ag~~~~-----~~~~~~~n~~~~~~~~~a~~~~-~~~~~v~~Ss~~--~~~~~~-------------------~~-~~Y  179 (198)
                      +|+....     +...+++|+.++.+++++|.+. ++++|||+||..  ++.+..                   +. .+|
T Consensus        81 ~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y  160 (322)
T 2p4h_X           81 TASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNY  160 (322)
T ss_dssp             CCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred             cCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccH
Confidence            9975421     2337889999999999999887 789999999943  322110                   11 169


Q ss_pred             HHHHHHHHHHHHhh
Q 029125          180 YEGKRAAETELLTR  193 (198)
Q Consensus       180 ~~sK~~~e~~l~~~  193 (198)
                      +.+|+++|.+++++
T Consensus       161 ~~sK~~~e~~~~~~  174 (322)
T 2p4h_X          161 AVSKTLAEKAVLEF  174 (322)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999988765

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.89  E-value=2.4e-23  Score=169.27  Aligned_cols=139  Identities=21%  Similarity=0.237  Sum_probs=107.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----c-cCCCCeEEEEccCCCHHHHHHHhcCCCEEEEc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----D-SWANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~  128 (198)
                      .+|+||||||+||||++|+++|+++|++|+++.|+......     . ....+++++.+|++|++++.++++++|+|||+
T Consensus         8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~   87 (338)
T 2rh8_A            8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHV   87 (338)
T ss_dssp             -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEe
Confidence            36899999999999999999999999999999987543110     0 01246889999999999999999999999999


Q ss_pred             cccCCC----C-ccceehhhHHHHHHHHHHHHcC-CCEEEEeeccc--cCCC---C------C---------C----cch
Q 029125          129 VGGFGS----N-SYMYKINGTANINAIRAASEKG-VKRFVYISAAD--FGVA---N------Y---------L----LQG  178 (198)
Q Consensus       129 ag~~~~----~-~~~~~~n~~~~~~~~~a~~~~~-~~~~v~~Ss~~--~~~~---~------~---------~----~~~  178 (198)
                      |+....    + ...+++|+.|+.+++++|.+.+ +++|||+||..  ++.+   .      .         +    ..+
T Consensus        88 A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~  167 (338)
T 2rh8_A           88 ATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWG  167 (338)
T ss_dssp             SSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCC
T ss_pred             CCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccch
Confidence            986431    1 2378899999999999999886 89999999943  2110   0      0         1    125


Q ss_pred             HHHHHHHHHHHHHhh
Q 029125          179 YYEGKRAAETELLTR  193 (198)
Q Consensus       179 Y~~sK~~~e~~l~~~  193 (198)
                      |+.+|.++|.+++++
T Consensus       168 Y~~sK~~~E~~~~~~  182 (338)
T 2rh8_A          168 YPASKTLAEKAAWKF  182 (338)
T ss_dssp             CTTSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999988764

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.89  E-value=1.7e-22  Score=172.23  Aligned_cols=143  Identities=21%  Similarity=0.270  Sum_probs=116.7

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHC---CCeEEEeecCCCCccc--------------------ccCCCCeEEEEcc
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDR---GLTVASLSRSGRSSLR--------------------DSWANNVIWHQGN  108 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~---g~~V~~l~r~~~~~~~--------------------~~~~~~~~~~~~D  108 (198)
                      ...++|+|+||||+||||++|+++|+++   |++|++++|+......                    .....++.++.+|
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            4457899999999999999999999998   8999999998653210                    0013589999999


Q ss_pred             CC------CHHHHHHHhcCCCEEEEccccCC--CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCCCC----
Q 029125          109 LL------SSDSWKEALDGVTAVISCVGGFG--SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVANYL----  175 (198)
Q Consensus       109 ~~------d~~~~~~~~~~~d~vi~~ag~~~--~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~~~----  175 (198)
                      ++      |.+.+.++++++|+|||+||...  .+...+++|+.++.+++++|.+.++++|||+|| .+|+.....    
T Consensus       149 l~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E  228 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTE  228 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCS
T ss_pred             CCCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCC
Confidence            98      67789999999999999999653  456778999999999999999999999999999 455532110    


Q ss_pred             -----------------cchHHHHHHHHHHHHHhhC
Q 029125          176 -----------------LQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       176 -----------------~~~Y~~sK~~~e~~l~~~~  194 (198)
                                       .+.|+.+|+++|.+++++.
T Consensus       229 ~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  264 (478)
T 4dqv_A          229 DADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREAN  264 (478)
T ss_dssp             SSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHH
T ss_pred             cccccccCcccccccccccchHHHHHHHHHHHHHHH
Confidence                             1449999999999998763

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.89  E-value=9.7e-23  Score=156.51  Aligned_cols=128  Identities=20%  Similarity=0.125  Sum_probs=104.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCCCCc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS  136 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~  136 (198)
                      |+|+||||+|+||++++++|+++|++|++++|++.+.. .....+++++.+|++|+++  ++++++|+|||++|... ..
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~-~~   76 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAA-DRLGATVATLVKEPLVLTE--ADLDSVDAVVDALSVPW-GS   76 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHTCTTSEEEECCGGGCCH--HHHTTCSEEEECCCCCT-TS
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccc-cccCCCceEEecccccccH--hhcccCCEEEECCccCC-Cc
Confidence            47999999999999999999999999999999865422 2234689999999999887  78899999999999752 22


Q ss_pred             cceehhhHHHHHHHHHHHHcCCCEEEEeecc-ccC-CCC------------CCcchHHHHHHHHHHH
Q 029125          137 YMYKINGTANINAIRAASEKGVKRFVYISAA-DFG-VAN------------YLLQGYYEGKRAAETE  189 (198)
Q Consensus       137 ~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~-~~~-~~~------------~~~~~Y~~sK~~~e~~  189 (198)
                      ....+|+.++.++++++++.+ ++||++||. .+. .+.            .+...|+.+|++.|.+
T Consensus        77 ~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~  142 (224)
T 3h2s_A           77 GRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEY  142 (224)
T ss_dssp             SCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHH
Confidence            346789999999999999999 899999984 322 211            1267899999999964

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.89  E-value=1.3e-22  Score=161.43  Aligned_cols=139  Identities=17%  Similarity=0.120  Sum_probs=111.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v  125 (198)
                      ++|+++||||+|+||++++++|+++|++|++++|+..+...  .....++.++.+|++|.+++.++++       ++|+|
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            56899999999999999999999999999999998654221  1224578999999999999888776       78999


Q ss_pred             EEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 029125          126 ISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       126 i~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      |||||...          .+...+++|+.+++++.+++    ++.+.++||++||...-.+.++...|+.||++.|.+++
T Consensus        84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  163 (281)
T 3m1a_A           84 VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSE  163 (281)
T ss_dssp             EECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHH
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHHHHHHH
Confidence            99999532          22456789999966555554    56677899999996544566778899999999999877


Q ss_pred             hh
Q 029125          192 TR  193 (198)
Q Consensus       192 ~~  193 (198)
                      ..
T Consensus       164 ~l  165 (281)
T 3m1a_A          164 GL  165 (281)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.88  E-value=8.9e-23  Score=162.38  Aligned_cols=122  Identities=18%  Similarity=0.231  Sum_probs=105.8

Q ss_pred             CC-eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEccccC
Q 029125           56 SE-KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGF  132 (198)
Q Consensus        56 ~~-~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~  132 (198)
                      |+ +|+||||+||||++++++|+++|++|++++|.                .+|++|.+.+.++++  ++|+|||+||..
T Consensus         4 M~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------~~D~~d~~~~~~~~~~~~~d~vi~~a~~~   67 (287)
T 3sc6_A            4 MKERVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------LLDITNISQVQQVVQEIRPHIIIHCAAYT   67 (287)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------TSCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             ceeEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------ccCCCCHHHHHHHHHhcCCCEEEECCccc
Confidence            44 99999999999999999999999999999993                369999999999998  799999999965


Q ss_pred             C------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC----------CCCcchHHHHHHHHHHHHHhhC
Q 029125          133 G------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       133 ~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~----------~~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                      .      .+...+++|+.++.+++++|++.++ +|||+|| .+|+..          ..+.+.|+.+|+++|.+++++.
T Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  145 (287)
T 3sc6_A           68 KVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELH  145 (287)
T ss_dssp             CHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHC
T ss_pred             ChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhC
Confidence            3      4566789999999999999999888 7999999 566542          3456799999999999998864

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.88  E-value=6.8e-22  Score=151.89  Aligned_cols=128  Identities=16%  Similarity=0.195  Sum_probs=104.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHH-HCCCeEEEeecCCC-Ccccc-cCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           56 SEKLLVLGGNGFVGSHICREAL-DRGLTVASLSRSGR-SSLRD-SWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~-~~g~~V~~l~r~~~-~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      |++|+||||+|+||++++++|+ ++|++|++++|++. +.... ....++.++.+|++|++++.++++++|+||||+|..
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~   84 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES   84 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence            4569999999999999999999 89999999999865 32111 034689999999999999999999999999999853


Q ss_pred             CCCccceehhhHHHHHHHHHHHHcCCCEEEEeecc-ccCCCCCC--------cc-hHHHHHHHHHHHHHhh
Q 029125          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVANYL--------LQ-GYYEGKRAAETELLTR  193 (198)
Q Consensus       133 ~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~-~~~~~~~~--------~~-~Y~~sK~~~e~~l~~~  193 (198)
                               |+. +.++++++++.++++||++||. +++..+..        .. .|+.+|..+|.++++.
T Consensus        85 ---------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~  145 (221)
T 3r6d_A           85 ---------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRES  145 (221)
T ss_dssp             ---------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHS
T ss_pred             ---------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHhC
Confidence                     444 8899999999999999999994 44432211        11 7999999999999864

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.88  E-value=3.2e-22  Score=159.04  Aligned_cols=128  Identities=19%  Similarity=0.230  Sum_probs=107.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHC--CCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDR--GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS  134 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~  134 (198)
                      |+|+||||+||||++++++|+++  |++|++++|++.+.. .....+++++.+|++|++++.++++++|+|||+++..  
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~--   77 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS-TLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPH--   77 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH-HHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCC--
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh-HHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCC--
Confidence            57999999999999999999999  999999999765422 1112478899999999999999999999999999863  


Q ss_pred             CccceehhhHHHHHHHHHHHHcCCCEEEEeecc-ccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          135 NSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       135 ~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~-~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ..  .++|+.++.+++++|++.++++|||+||. ++.    ...+|+.+|.++|.++++.
T Consensus        78 ~~--~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~----~~~~y~~~K~~~E~~~~~~  131 (287)
T 2jl1_A           78 YD--NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEE----SIIPLAHVHLATEYAIRTT  131 (287)
T ss_dssp             SC--HHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG----CCSTHHHHHHHHHHHHHHT
T ss_pred             cC--chHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC----CCCchHHHHHHHHHHHHHc
Confidence            11  15799999999999999999999999994 332    2348999999999999764

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.88  E-value=4e-22  Score=160.83  Aligned_cols=123  Identities=20%  Similarity=0.213  Sum_probs=105.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEccccCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFG  133 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~~  133 (198)
                      +|+|+||||+||||++++++|+++|++|++++|+.               .+|+.|.+++.++++  ++|+|||+|+...
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------~~D~~d~~~~~~~~~~~~~d~vih~a~~~~   67 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------ELNLLDSRAVHDFFASERIDQVYLAAAKVG   67 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------cCCccCHHHHHHHHHhcCCCEEEEcCeecC
Confidence            46899999999999999999999999999988752               269999999999998  9999999999754


Q ss_pred             -------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC--------------CCC-cchHHHHHHHHHHHH
Q 029125          134 -------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA--------------NYL-LQGYYEGKRAAETEL  190 (198)
Q Consensus       134 -------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~--------------~~~-~~~Y~~sK~~~e~~l  190 (198)
                             .+...+++|+.++.+++++|.+.++++|||+|| .+|+..              ..+ .+.|+.+|+++|.++
T Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~  147 (321)
T 1e6u_A           68 GIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLC  147 (321)
T ss_dssp             CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHH
T ss_pred             CcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHH
Confidence                   335567899999999999999999999999999 566531              222 258999999999998


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +++
T Consensus       148 ~~~  150 (321)
T 1e6u_A          148 ESY  150 (321)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.88  E-value=6.8e-23  Score=156.32  Aligned_cols=129  Identities=17%  Similarity=0.181  Sum_probs=110.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      ++|+|+||||+|+||++++++|+++|+  +|++++|++.+     ...+++++.+|++|++++.+++  +|+|||++|..
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~   76 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----EHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTT   76 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----CCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----cCCCceEEeccccCHHHHHHhh--hcEEEECeeec
Confidence            357999999999999999999999998  99999998654     1357888999999998888877  99999999964


Q ss_pred             C----CCccceehhhHHHHHHHHHHHHcCCCEEEEeecc-ccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          133 G----SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       133 ~----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~-~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      .    .++..+++|+.++.++++++.+.++++|||+||. +++   .+...|+.+|+++|.++++.
T Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~---~~~~~y~~sK~~~e~~~~~~  139 (215)
T 2a35_A           77 IKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA---KSSIFYNRVKGELEQALQEQ  139 (215)
T ss_dssp             HHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT---TCSSHHHHHHHHHHHHHTTS
T ss_pred             cccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCC---CCccHHHHHHHHHHHHHHHc
Confidence            3    4566788999999999999999999999999994 443   34568999999999999864

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.88  E-value=2.5e-22  Score=164.59  Aligned_cols=137  Identities=18%  Similarity=0.207  Sum_probs=109.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-----CCCEEEEc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-----GVTAVISC  128 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~d~vi~~  128 (198)
                      ++|+|+||||+||||++|+++|+++| ++|++++|......... ..++. +.+|++|.+.+..+++     ++|+|||+
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vih~  122 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVN-LVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHE  122 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGG-TTTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhc-ccCce-EeeecCcHHHHHHHHhhcccCCCCEEEEC
Confidence            45789999999999999999999999 99999999765421111 12333 6789999999999887     59999999


Q ss_pred             cccCC----CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC----------CCcchHHHHHHHHHHHHHhh
Q 029125          129 VGGFG----SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN----------YLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       129 ag~~~----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~----------~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ||...    .+...+++|+.++.+++++|.+.++ +|||+|| .+|+...          .+.+.|+.+|+++|.+++++
T Consensus       123 A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~  201 (357)
T 2x6t_A          123 GACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQI  201 (357)
T ss_dssp             CSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHHHHHH
T ss_pred             CcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHHHHHH
Confidence            99653    3345688999999999999999888 9999999 5666432          24678999999999999876


Q ss_pred             C
Q 029125          194 Y  194 (198)
Q Consensus       194 ~  194 (198)
                      .
T Consensus       202 ~  202 (357)
T 2x6t_A          202 L  202 (357)
T ss_dssp             G
T ss_pred             H
Confidence            4

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.88  E-value=1.9e-22  Score=161.21  Aligned_cols=124  Identities=19%  Similarity=0.180  Sum_probs=105.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcC--CCEEEEccccCC-
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG--VTAVISCVGGFG-  133 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi~~ag~~~-  133 (198)
                      |+|+||||+||||++++++|+ +|++|++++|+..            ++.+|++|++++.+++++  +|+|||+||... 
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~   67 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAV   67 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------cccccCCCHHHHHHHHHhcCCCEEEECcccCCH
Confidence            479999999999999999999 8999999998741            346899999999999986  999999998643 


Q ss_pred             -----CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC----------CCCcchHHHHHHHHHHHHHhhC
Q 029125          134 -----SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       134 -----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~----------~~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                           .+...+++|+.++.+++++|++.++ +|||+|| .+|+..          ..+.+.|+.+|+++|.+++++.
T Consensus        68 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  143 (299)
T 1n2s_A           68 DKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNC  143 (299)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHC
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHhC
Confidence                 3456788999999999999998887 8999999 556542          2346789999999999998764

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.88  E-value=1.2e-21  Score=155.37  Aligned_cols=140  Identities=18%  Similarity=0.104  Sum_probs=114.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+...  .....++.++.+|++|++++.++++       ++|+
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B            9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            467899999999999999999999999999999998655221  1224578899999999999888876       7999


Q ss_pred             EEEccccCCC------------CccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          125 VISCVGGFGS------------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       125 vi~~ag~~~~------------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      +|||||....            |+..+++|+.+++++++++    .+.+.++||++||...-.+.++...|+.+|++.+.
T Consensus        89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  168 (271)
T 3tzq_B           89 VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIET  168 (271)
T ss_dssp             EEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHHHHHHHH
Confidence            9999996521            2356789999999999988    55677899999996544556677899999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       169 l~~~l  173 (271)
T 3tzq_B          169 LTRYV  173 (271)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87754

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.88  E-value=1.3e-21  Score=154.33  Aligned_cols=136  Identities=14%  Similarity=0.122  Sum_probs=111.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi  126 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+..    ..++.++.+|++|++++.++++       ++|+||
T Consensus        26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv  101 (260)
T 3un1_A           26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA----DPDIHTVAGDISKPETADRIVREGIERFGRIDSLV  101 (260)
T ss_dssp             TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS----STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc----cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            45789999999999999999999999999999999865422    2478999999999999888776       799999


Q ss_pred             EccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccc-cC-CCCCCcchHHHHHHHHHHHH
Q 029125          127 SCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAAD-FG-VANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       127 ~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~-~~-~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      ||||...          .++..+++|+.+++++++++    .+.+.++||++||.. +. .+..+...|+.||++.+.+.
T Consensus       102 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~  181 (260)
T 3un1_A          102 NNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVT  181 (260)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHHHHHHHHHH
Confidence            9999642          23456789999999999887    456778999999943 22 34456689999999999888


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       182 ~~l  184 (260)
T 3un1_A          182 RSL  184 (260)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            754

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.88  E-value=7.1e-22  Score=155.98  Aligned_cols=141  Identities=20%  Similarity=0.149  Sum_probs=112.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      ..++|+++||||+|+||++++++|+++|++|++++|+..+...      .....++.++.+|++|++++.++++      
T Consensus         7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (262)
T 3pk0_A            7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF   86 (262)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            3567899999999999999999999999999999998543111      1112578999999999999888775      


Q ss_pred             -CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccC-CCCCCcchHHHHHH
Q 029125          121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFG-VANYLLQGYYEGKR  184 (198)
Q Consensus       121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~-~~~~~~~~Y~~sK~  184 (198)
                       ++|+||||||...          .|+..+++|+.+++++++++..    .+.++||++||.... .+.+....|+.+|+
T Consensus        87 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~  166 (262)
T 3pk0_A           87 GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKA  166 (262)
T ss_dssp             SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHHHHH
Confidence             7999999999642          1345679999999988888754    367899999995432 45567789999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.+.+.+..
T Consensus       167 a~~~l~~~l  175 (262)
T 3pk0_A          167 AQLGFMRTA  175 (262)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999888764

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.88  E-value=5.3e-22  Score=157.14  Aligned_cols=142  Identities=15%  Similarity=0.123  Sum_probs=112.4

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-----
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      ...++|+++||||+|+||++++++|+++|++|++++|+..+...      .....++.++.+|++|++++.++++     
T Consensus        17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (267)
T 1vl8_A           17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   96 (267)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999997543111      1113568889999999998887775     


Q ss_pred             --CCCEEEEccccCCC----------CccceehhhHHHHHHHHHHH----HcCCCEEEEeeccc-cCCCCCCcchHHHHH
Q 029125          121 --GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAAD-FGVANYLLQGYYEGK  183 (198)
Q Consensus       121 --~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~-~~~~~~~~~~Y~~sK  183 (198)
                        ++|+||||||....          |+..+++|+.+++++++++.    +.+.++||++||.. ...+.++...|+.+|
T Consensus        97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK  176 (267)
T 1vl8_A           97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASK  176 (267)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHHHHH
Confidence              68999999996431          24467899999998888773    44677999999965 444556678999999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      ++.+.+++..
T Consensus       177 ~a~~~~~~~l  186 (267)
T 1vl8_A          177 GGVASLTKAL  186 (267)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999888754

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.88  E-value=3e-22  Score=156.66  Aligned_cols=139  Identities=16%  Similarity=0.116  Sum_probs=111.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ++|+++||||+|+||++++++|+++|++|++++|+.....+      .....++.++.+|++|.+++.++++       +
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            56899999999999999999999999999999886432111      1123578899999999999888776       7


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|+||||||...          .|+..+++|+.+++++++++    .+.+.++||++||...-.+.++...|+.+|++.+
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  162 (246)
T 3osu_A           83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVI  162 (246)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHH
Confidence            899999999642          23456899999999999988    5566779999999543344566789999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+.+..
T Consensus       163 ~~~~~l  168 (246)
T 3osu_A          163 GLTKSA  168 (246)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887754

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.88  E-value=5.7e-22  Score=155.95  Aligned_cols=140  Identities=19%  Similarity=0.171  Sum_probs=108.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+......  .....++.++.+|++|++++.++++       ++|+
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A            5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            457899999999999999999999999999999998654222  1223568999999999999888776       7999


Q ss_pred             EEEccccCC--------------CCccceehhhHHHHHHHHHHHHc----------CCCEEEEeeccccCCCCCCcchHH
Q 029125          125 VISCVGGFG--------------SNSYMYKINGTANINAIRAASEK----------GVKRFVYISAADFGVANYLLQGYY  180 (198)
Q Consensus       125 vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~a~~~~----------~~~~~v~~Ss~~~~~~~~~~~~Y~  180 (198)
                      +|||||...              .|+..+++|+.+++++++++...          +.++||++||...-.+.++...|+
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  164 (257)
T 3tpc_A           85 LVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYA  164 (257)
T ss_dssp             EEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHH
T ss_pred             EEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcchH
Confidence            999999642              12345789999999999988653          456899999954334556678999


Q ss_pred             HHHHHHHHHHHhh
Q 029125          181 EGKRAAETELLTR  193 (198)
Q Consensus       181 ~sK~~~e~~l~~~  193 (198)
                      .+|++.+.+.+..
T Consensus       165 asKaa~~~~~~~l  177 (257)
T 3tpc_A          165 ASKGGVAALTLPA  177 (257)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999887654

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.87  E-value=1.1e-21  Score=160.03  Aligned_cols=135  Identities=22%  Similarity=0.244  Sum_probs=106.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---c-cCCCCeEEEEccCCCHHHHHHHhcCCCEEEEc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D-SWANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~  128 (198)
                      ..++++|+||||+||||++|+++|+++|++|++++|.......   . ....++.++.+|+.|..     +.++|+|||+
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~vih~   98 (343)
T 2b69_A           24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL-----YIEVDQIYHL   98 (343)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC-----CCCCSEEEEC
T ss_pred             ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh-----hcCCCEEEEC
Confidence            3467899999999999999999999999999999997543211   1 11357899999998753     6789999999


Q ss_pred             cccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCC---------------CCCCcchHHHHHHHH
Q 029125          129 VGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGV---------------ANYLLQGYYEGKRAA  186 (198)
Q Consensus       129 ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~---------------~~~~~~~Y~~sK~~~  186 (198)
                      ||...      .+...+++|+.++.+++++|.+.++ +|||+|| .+|+.               +..+.+.|+.+|+++
T Consensus        99 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  177 (343)
T 2b69_A           99 ASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVA  177 (343)
T ss_dssp             CSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHH
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHH
Confidence            98643      3345678999999999999998886 9999999 55653               223456799999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      |.+++.+
T Consensus       178 E~~~~~~  184 (343)
T 2b69_A          178 ETMCYAY  184 (343)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998764

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.87  E-value=1.9e-22  Score=161.63  Aligned_cols=128  Identities=23%  Similarity=0.226  Sum_probs=103.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcC--CCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG--VTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi~~ag~  131 (198)
                      .++|+|+||||+||||++|+++|+++|+      +....      ...++++.+|++|++.+.+++++  +|+|||+|+.
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~------~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~   71 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED------WVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAM   71 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE------EEECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCC
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc------ccccCceecccCCHHHHHHHHhhcCCCEEEECcee
Confidence            4678999999999999999999999998      11111      12345567899999999999986  9999999997


Q ss_pred             CC-------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC--------------CCCcc-hHHHHHHHHHH
Q 029125          132 FG-------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA--------------NYLLQ-GYYEGKRAAET  188 (198)
Q Consensus       132 ~~-------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~--------------~~~~~-~Y~~sK~~~e~  188 (198)
                      ..       .+...+++|+.++.+++++|++.++++|||+|| .+|+..              ..+.. +|+.+|+++|.
T Consensus        72 ~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~  151 (319)
T 4b8w_A           72 VGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDV  151 (319)
T ss_dssp             CCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHH
T ss_pred             cccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHH
Confidence            43       334568999999999999999999999999999 566642              22223 69999999999


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++.+
T Consensus       152 ~~~~~  156 (319)
T 4b8w_A          152 QNRAY  156 (319)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98774

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.87  E-value=3.4e-22  Score=157.80  Aligned_cols=140  Identities=18%  Similarity=0.150  Sum_probs=111.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi  126 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+........++.++.+|++|++++.++++       ++|+||
T Consensus        25 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv  104 (260)
T 3gem_A           25 LSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVV  104 (260)
T ss_dssp             --CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            4578999999999999999999999999999999987543221112357899999999998888775       689999


Q ss_pred             EccccCCC---------CccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          127 SCVGGFGS---------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       127 ~~ag~~~~---------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ||||....         |+..+++|+.+++++++++.    +.+.++||++||...-.+.+....|+.+|++.+.+++..
T Consensus       105 ~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~l  184 (260)
T 3gem_A          105 HNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSF  184 (260)
T ss_dssp             ECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHHHHHHHHHHHH
T ss_pred             ECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHHHHHHHHHHHH
Confidence            99996431         23568899999999888874    345679999999654455667789999999999887754

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.87  E-value=2.2e-22  Score=153.98  Aligned_cols=126  Identities=17%  Similarity=0.135  Sum_probs=102.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCCCCc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS  136 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~  136 (198)
                      |+|+||||+|+||++++++|+++|++|++++|++.+....  ..+++++.+|++|+++  ++++++|+|||++|...   
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~---   73 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT--HKDINILQKDIFDLTL--SDLSDQNVVVDAYGISP---   73 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH--CSSSEEEECCGGGCCH--HHHTTCSEEEECCCSST---
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc--cCCCeEEeccccChhh--hhhcCCCEEEECCcCCc---
Confidence            5799999999999999999999999999999986542221  1678999999999887  78899999999999743   


Q ss_pred             cceehhhHHHHHHHHHHHHcCCCEEEEeecc-c-cCCC----------CCCcchHHHHHHHHHHH
Q 029125          137 YMYKINGTANINAIRAASEKGVKRFVYISAA-D-FGVA----------NYLLQGYYEGKRAAETE  189 (198)
Q Consensus       137 ~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~-~-~~~~----------~~~~~~Y~~sK~~~e~~  189 (198)
                      ....+|+.++.++++++++.++++||++||. . ++.+          ..+...|+.+|...|.+
T Consensus        74 ~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~  138 (221)
T 3ew7_A           74 DEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQL  138 (221)
T ss_dssp             TTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHH
Confidence            2356799999999999999989999999994 3 2222          23456799999999986

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.87  E-value=1.1e-21  Score=157.38  Aligned_cols=142  Identities=22%  Similarity=0.159  Sum_probs=113.2

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-----
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      ...++|+++||||+|+||++++++|+++|++|++++|+..+...      .....++.++.+|++|++++.++++     
T Consensus        37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  116 (293)
T 3rih_A           37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA  116 (293)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999998654211      1112478999999999988877765     


Q ss_pred             --CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeecccc-CCCCCCcchHHHHH
Q 029125          121 --GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADF-GVANYLLQGYYEGK  183 (198)
Q Consensus       121 --~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~-~~~~~~~~~Y~~sK  183 (198)
                        ++|+||||||...          .|+..+++|+.+++++++++    ++.+.++||++||... ..+.+....|+.+|
T Consensus       117 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asK  196 (293)
T 3rih_A          117 FGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASK  196 (293)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHHHHH
Confidence              6899999999643          23456899999999999887    4566789999999543 24556678999999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      ++.+.+.+..
T Consensus       197 aa~~~l~~~l  206 (293)
T 3rih_A          197 AAQLGFMRTA  206 (293)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999888754

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.87  E-value=5.2e-22  Score=158.87  Aligned_cols=141  Identities=18%  Similarity=0.123  Sum_probs=114.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc---CCCEEEE
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD---GVTAVIS  127 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~vi~  127 (198)
                      ..++|+++||||+|+||.+++++|+++|++|++++|+..+...  .....++.++.+|++|.+++.++++   ++|+|||
T Consensus        13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~   92 (291)
T 3rd5_A           13 SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLIN   92 (291)
T ss_dssp             CCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEE
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence            4567899999999999999999999999999999998644211  2224578999999999999999887   5799999


Q ss_pred             ccccCC--------CCccceehhhHHHHHHHHHHHHcCCCEEEEeecc-ccCC------------CCCCcchHHHHHHHH
Q 029125          128 CVGGFG--------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGV------------ANYLLQGYYEGKRAA  186 (198)
Q Consensus       128 ~ag~~~--------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~-~~~~------------~~~~~~~Y~~sK~~~  186 (198)
                      |||...        .++..+++|+.+++++++++.....++||++||. .+..            +..+...|+.||++.
T Consensus        93 nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~  172 (291)
T 3rd5_A           93 NAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLAN  172 (291)
T ss_dssp             CCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHH
T ss_pred             CCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHHHH
Confidence            999642        3466789999999999999988877899999994 3321            123456899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+.+..
T Consensus       173 ~~~~~~l  179 (291)
T 3rd5_A          173 LLFTSEL  179 (291)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9887654

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.87  E-value=9e-22  Score=173.64  Aligned_cols=139  Identities=17%  Similarity=0.231  Sum_probs=112.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHC-CCeEEEeecCCCCcccccCCCCeEEEEccCCCHHH-HHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS-WKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~~~d~vi~~ag~  131 (198)
                      .++|+|+||||+||||++++++|+++ |++|++++|+...........+++++.+|++|.++ +.++++++|+|||+||.
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~  392 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI  392 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCC
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECcee
Confidence            35689999999999999999999998 89999999986543222223578999999999765 77788899999999986


Q ss_pred             CC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC-----------------CCcchHHHHHHHHH
Q 029125          132 FG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN-----------------YLLQGYYEGKRAAE  187 (198)
Q Consensus       132 ~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~-----------------~~~~~Y~~sK~~~e  187 (198)
                      ..      .+...+++|+.++.+++++|.+.+ ++|||+|| .+|+...                 .+.+.|+.+|+++|
T Consensus       393 ~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E  471 (660)
T 1z7e_A          393 ATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLD  471 (660)
T ss_dssp             CCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHH
T ss_pred             cCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHH
Confidence            44      234567899999999999999988 89999999 5565321                 23347999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++++
T Consensus       472 ~~~~~~  477 (660)
T 1z7e_A          472 RVIWAY  477 (660)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998764

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.87  E-value=9.6e-22  Score=155.09  Aligned_cols=125  Identities=20%  Similarity=0.152  Sum_probs=105.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcC--CCEEEEccccCC-
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG--VTAVISCVGGFG-  133 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi~~ag~~~-  133 (198)
                      |+|+||||+|+||++++++|+ +|++|++++|++...      .+   +.+|++|++++.+++++  +|+|||+||... 
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~   70 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ------GG---YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDV   70 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT------TC---EECCTTSHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC------CC---ceeccCCHHHHHHHHHhcCCCEEEECCcccCh
Confidence            479999999999999999999 489999999986431      22   78999999999999986  999999999653 


Q ss_pred             -----CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC---------CCcchHHHHHHHHHHHHHh
Q 029125          134 -----SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN---------YLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       134 -----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~---------~~~~~Y~~sK~~~e~~l~~  192 (198)
                           .+...+++|+.++.++++++.+.+. +|||+|| .+|+...         .+.+.|+.+|+++|.+++.
T Consensus        71 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~  143 (273)
T 2ggs_A           71 DKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQ  143 (273)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC
T ss_pred             hhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC
Confidence                 4456789999999999999998876 9999999 5554322         2467899999999999875

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.87  E-value=2.9e-21  Score=151.40  Aligned_cols=135  Identities=10%  Similarity=0.103  Sum_probs=110.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi  126 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+....     ..++.++.+|++|++++.++++       ++|+||
T Consensus         5 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv   79 (250)
T 2fwm_X            5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE-----QYPFATEVMDVADAAQVAQVCQRLLAETERLDALV   79 (250)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS-----CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh-----cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3568999999999999999999999999999999976431     1237889999999999888876       789999


Q ss_pred             EccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          127 SCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       127 ~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      ||||...          .|+..+++|+.+++++++++    ++.+.++||++||.....+.++...|+.+|++.+.+.+.
T Consensus        80 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  159 (250)
T 2fwm_X           80 NAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALS  159 (250)
T ss_dssp             ECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHHHHHHHHH
Confidence            9999642          23456789999999988887    455678999999955444556678999999999988775


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       160 l  160 (250)
T 2fwm_X          160 V  160 (250)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.87  E-value=2.3e-21  Score=153.27  Aligned_cols=133  Identities=17%  Similarity=0.134  Sum_probs=110.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS  127 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~  127 (198)
                      ++|+|+||||+|+||++++++|+++|++|++++|+...      ..++.++.+|++|++++.++++       ++|+|||
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~   80 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN   80 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            56899999999999999999999999999999997644      3467899999999999888776       6999999


Q ss_pred             ccccCC----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          128 CVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       128 ~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      |||...          .|+..+++|+.+++++++++..    .+.++||++||.....+.++...|+.+|++.+.+++..
T Consensus        81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l  160 (264)
T 2dtx_A           81 NAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSI  160 (264)
T ss_dssp             CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHHHHHHHHHH
Confidence            999542          2345678999999988888754    45679999999544445566789999999999887754

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.87  E-value=5.6e-22  Score=156.19  Aligned_cols=140  Identities=16%  Similarity=0.174  Sum_probs=112.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+......  .....++.++.+|++|++++.++++       ++|+
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   85 (259)
T 4e6p_A            6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI   85 (259)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            457899999999999999999999999999999997543211  1224568899999999999888876       7999


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHHHHc----C-CCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAASEK----G-VKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~----~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      ||||||...          .|+..+++|+.+++++++++...    + .++||++||...-.+.+....|+.+|++.+.+
T Consensus        86 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  165 (259)
T 4e6p_A           86 LVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISL  165 (259)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHHHHHHH
Confidence            999999643          23456789999999999887532    2 46999999955445556678999999999988


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      .+..
T Consensus       166 ~~~l  169 (259)
T 4e6p_A          166 TQSA  169 (259)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.87  E-value=9.1e-22  Score=155.79  Aligned_cols=139  Identities=15%  Similarity=0.128  Sum_probs=111.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi  126 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+.. .....++.++.+|++|.+++.++++       ++|+||
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   92 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLK-ALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIV   92 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHH-TTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            45689999999999999999999999999999999754321 2223478899999999998888776       789999


Q ss_pred             EccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          127 SCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       127 ~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      ||||...          .|+..+++|+.+++++++++    ++.+.++||++||...-.+.+....|+.+|++.+.+.+.
T Consensus        93 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~  172 (266)
T 3p19_A           93 NNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISEN  172 (266)
T ss_dssp             ECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHHHHHHHHH
Confidence            9999642          23456889999999877776    455778999999955445556678999999999987765


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       173 l  173 (266)
T 3p19_A          173 V  173 (266)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.87  E-value=1e-21  Score=154.71  Aligned_cols=140  Identities=21%  Similarity=0.098  Sum_probs=111.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHh--------c
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEAL--------D  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~--------~  120 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+......     .....++.++.+|++|++++.+++        .
T Consensus         7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999999997543111     011346889999999999888776        4


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      ++|+||||||...          .++..+++|+.+++++++++.    +.+.++||++||.....+.++...|+.+|++.
T Consensus        87 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  166 (260)
T 2ae2_A           87 KLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAM  166 (260)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHHHHH
Confidence            6999999999542          124467899999999988883    45678999999954334456678999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       167 ~~~~~~l  173 (260)
T 2ae2_A          167 DQLTRCL  173 (260)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9988754

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.87  E-value=1.9e-21  Score=154.15  Aligned_cols=137  Identities=15%  Similarity=0.112  Sum_probs=111.3

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      ...++|+|+||||+|+||++++++|+++|++|++++|+....     ...+..+.+|++|.+++.++++       ++|+
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-----VNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-----TTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-----cCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            456789999999999999999999999999999999976543     2356889999999999888775       7899


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      ||||||...          .|+..+++|+.+++++++++.    +.+.++||++||...-.+.+....|+.||++.+.+.
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~  164 (269)
T 3vtz_A           85 LVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLT  164 (269)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHHHHHHHHH
Confidence            999999643          124567899999998888864    356779999999554445566789999999999988


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       165 ~~l  167 (269)
T 3vtz_A          165 RSV  167 (269)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            754

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.87  E-value=6.9e-22  Score=154.70  Aligned_cols=140  Identities=14%  Similarity=0.150  Sum_probs=112.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++++|+||||+|+||++++++|+++|++|++++|+......     .....++.++.+|++|++++.++++       +
T Consensus         9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   88 (255)
T 1fmc_A            9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            456899999999999999999999999999999997543111     1113568899999999999988876       7


Q ss_pred             CCEEEEccccCCC---------CccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          122 VTAVISCVGGFGS---------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       122 ~d~vi~~ag~~~~---------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      +|+||||||....         ++..+++|+.++.++++++.    +.+.++||++||.....+.++...|+.+|++.|.
T Consensus        89 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  168 (255)
T 1fmc_A           89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASH  168 (255)
T ss_dssp             CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHHH
Confidence            9999999996432         23467899999998888874    4567899999995544455667899999999999


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       169 ~~~~~  173 (255)
T 1fmc_A          169 LVRNM  173 (255)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.87  E-value=3.6e-21  Score=149.96  Aligned_cols=139  Identities=14%  Similarity=0.119  Sum_probs=113.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc---CCCEEEEccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD---GVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~vi~~ag  130 (198)
                      .++|+++||||+++||+++++.|+++|++|++++|+.+... .....++..+.+|++|+++++++++   ++|++|||||
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAG   87 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVH-APRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAG   87 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTT-SCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHh-hhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            36899999999999999999999999999999999865532 2334678999999999999988775   6899999999


Q ss_pred             cCC--------CCccceehhhHHHHHHHHHHHH---cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          131 GFG--------SNSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       131 ~~~--------~~~~~~~~n~~~~~~~~~a~~~---~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ...        .|+..+++|+.+++.+.+++..   .+-.+||++||...-.+.+....|+.||++...+.+..
T Consensus        88 i~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~l  161 (242)
T 4b79_A           88 ISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSL  161 (242)
T ss_dssp             CCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCCHHHHHHHHHHHHHHHHH
Confidence            643        3566789999999988887633   12369999999655556667789999999999877653

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.87  E-value=9.1e-22  Score=156.65  Aligned_cols=141  Identities=11%  Similarity=0.055  Sum_probs=112.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      ..++|+++||||+|+||++++++|+++|++|++++|+......  .....++.++.+|++|++++.++++       ++|
T Consensus        24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  103 (277)
T 4dqx_A           24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVD  103 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            3567899999999999999999999999999999997543111  1124578999999999999888775       789


Q ss_pred             EEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          124 AVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      +||||||...          .|+..+++|+.+++++++++.    +.+.++||++||.....+.++...|+.||++.+.+
T Consensus       104 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l  183 (277)
T 4dqx_A          104 VLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSL  183 (277)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHHHHHHHH
Confidence            9999999542          234567899999998888874    34556999999965445666778999999999988


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      .+..
T Consensus       184 ~~~l  187 (277)
T 4dqx_A          184 TRAM  187 (277)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7754

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.87  E-value=1.6e-21  Score=153.44  Aligned_cols=140  Identities=11%  Similarity=0.067  Sum_probs=112.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+...     .....++.++.+|++|++++.++++       +
T Consensus         4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (257)
T 3imf_A            4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR   83 (257)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999999998543111     1224578999999999999888775       6


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHH-----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAA-----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~-----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      +|+||||||...          .|+..+++|+.+++++++++     ++.+.++||++||.....+.+....|+.+|++.
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  163 (257)
T 3imf_A           84 IDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGV  163 (257)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHHHH
Confidence            899999999532          23456899999999999887     334467999999965445566778999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+.+..
T Consensus       164 ~~l~~~l  170 (257)
T 3imf_A          164 LAMTKTL  170 (257)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9887653

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.87  E-value=4e-22  Score=167.36  Aligned_cols=139  Identities=18%  Similarity=0.273  Sum_probs=109.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc-----------------cccCCCCeEEEEccCCCHHHH
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-----------------RDSWANNVIWHQGNLLSSDSW  115 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~-----------------~~~~~~~~~~~~~D~~d~~~~  115 (198)
                      ...+++|+||||+||||++++++|+++|++|++++|+.....                 ......++.++.+|++|++.+
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            345789999999999999999999999999999999876210                 001136899999999998888


Q ss_pred             HHHhcCCCEEEEccccCC---CCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCC------------------CC
Q 029125          116 KEALDGVTAVISCVGGFG---SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVA------------------NY  174 (198)
Q Consensus       116 ~~~~~~~d~vi~~ag~~~---~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~------------------~~  174 (198)
                      . .+.++|+||||||...   .+...+++|+.++.+++++|.+ ++++|||+||...|..                  ..
T Consensus       146 ~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~~~~~  223 (427)
T 4f6c_A          146 V-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQL  223 (427)
T ss_dssp             C-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGGGSEECSSCSCCEECTTCSCSSCC
T ss_pred             C-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHhCCCccCCCCCccccccccccCCC
Confidence            7 7789999999999653   4567789999999999999998 7889999999433321                  23


Q ss_pred             CcchHHHHHHHHHHHHHhh
Q 029125          175 LLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       175 ~~~~Y~~sK~~~e~~l~~~  193 (198)
                      +.+.|+.+|+++|.+++++
T Consensus       224 ~~~~Y~~sK~~~E~~~~~~  242 (427)
T 4f6c_A          224 LTSPYTRSKFYSELKVLEA  242 (427)
T ss_dssp             CCSHHHHHHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHH
Confidence            6789999999999999875

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.87  E-value=1.5e-21  Score=153.40  Aligned_cols=140  Identities=14%  Similarity=0.175  Sum_probs=112.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc------CC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD------GV  122 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~------~~  122 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+...     .....++.++.+|++|++++.++++      ++
T Consensus         5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i   84 (252)
T 3h7a_A            5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPL   84 (252)
T ss_dssp             CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence            457899999999999999999999999999999997654211     1124578999999999999988876      68


Q ss_pred             CEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      |++|||||...          .++..+++|+.+++++++++    ++.+.++||++||...-.+.+....|+.||++.+.
T Consensus        85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  164 (252)
T 3h7a_A           85 EVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRA  164 (252)
T ss_dssp             EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHHHHHH
T ss_pred             eEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHHHHHH
Confidence            99999999643          13456889999999888876    44566799999996544556677899999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +.+..
T Consensus       165 l~~~l  169 (252)
T 3h7a_A          165 VAQSM  169 (252)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87754

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.87  E-value=1.7e-21  Score=172.78  Aligned_cols=140  Identities=21%  Similarity=0.249  Sum_probs=114.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc--CCCEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD--GVTAV  125 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v  125 (198)
                      .++|+|+||||+||||++|+++|+++|++|++++|+......      .....++.++.+|++|++++.++++  ++|+|
T Consensus         9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~V   88 (699)
T 1z45_A            9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSV   88 (699)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEE
Confidence            356899999999999999999999999999999987543211      0113578899999999999999998  89999


Q ss_pred             EEccccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC--------------CCCcchHHHHHH
Q 029125          126 ISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA--------------NYLLQGYYEGKR  184 (198)
Q Consensus       126 i~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~--------------~~~~~~Y~~sK~  184 (198)
                      ||+||...      .....+++|+.++.+++++|++.++++|||+|| .+|+..              ..+.+.|+.+|+
T Consensus        89 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~  168 (699)
T 1z45_A           89 IHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKY  168 (699)
T ss_dssp             EECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHH
T ss_pred             EECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHH
Confidence            99999653      234568899999999999999989999999999 556532              124578999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      ++|.++++.
T Consensus       169 ~~E~~~~~~  177 (699)
T 1z45_A          169 AIENILNDL  177 (699)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998865

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.87  E-value=1e-21  Score=153.55  Aligned_cols=142  Identities=18%  Similarity=0.093  Sum_probs=111.9

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc--cccCCCCeEEEEccCCCHHHHHHHhc---CCCEEE
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALD---GVTAVI  126 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~vi  126 (198)
                      ...++++|+||||+|+||++++++|+++|++|++++|+..+..  ......++.++.+|++|.+++.++++   ++|+||
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li   89 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILV   89 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEE
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence            4567899999999999999999999999999999999754311  11224578999999999999998887   689999


Q ss_pred             EccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          127 SCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       127 ~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      ||||...          .++..+++|+.+++++++++.    +.+.++||++||...-.+.+....|+.+|++.+.+++.
T Consensus        90 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  169 (249)
T 3f9i_A           90 CNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKS  169 (249)
T ss_dssp             ECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHHHHHHHHHHH
Confidence            9999542          335678999999998888773    34567999999954444556678999999999988775


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       170 l  170 (249)
T 3f9i_A          170 L  170 (249)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.87  E-value=2.1e-21  Score=152.11  Aligned_cols=140  Identities=11%  Similarity=0.088  Sum_probs=110.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC-CCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG-RSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~-~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|++ .+...  .....++.++.+|++|++++.++++       ++|
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            3568999999999999999999999999999999986 32111  1123568899999999998887753       799


Q ss_pred             EEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          124 AVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      +||||||...          .++..+++|+.+++++++++    ++.+.++||++||...-.+.++...|+.+|++.+.+
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  164 (249)
T 2ew8_A           85 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGF  164 (249)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHHHHHHH
Confidence            9999999642          12446789999998888874    455678999999954334556678999999999988


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      .+..
T Consensus       165 ~~~l  168 (249)
T 2ew8_A          165 TRAL  168 (249)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.87  E-value=2.7e-21  Score=153.97  Aligned_cols=141  Identities=17%  Similarity=0.137  Sum_probs=112.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc-----------c------ccCCCCeEEEEccCCCHHHH
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-----------R------DSWANNVIWHQGNLLSSDSW  115 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~-----------~------~~~~~~~~~~~~D~~d~~~~  115 (198)
                      ..++|+++||||+|+||++++++|+++|++|++++|++....           .      .....++.++.+|++|++++
T Consensus         7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   86 (281)
T 3s55_A            7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL   86 (281)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            346789999999999999999999999999999999743210           0      11235789999999999998


Q ss_pred             HHHhc-------CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCC
Q 029125          116 KEALD-------GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANY  174 (198)
Q Consensus       116 ~~~~~-------~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~  174 (198)
                      .++++       ++|++|||||...          .|+..+++|+.+++++++++    .+.+.++||++||...-.+.+
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  166 (281)
T 3s55_A           87 ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANF  166 (281)
T ss_dssp             HHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCT
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCC
Confidence            88775       7999999999643          23456789999999999886    345667999999965445566


Q ss_pred             CcchHHHHHHHHHHHHHhh
Q 029125          175 LLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       175 ~~~~Y~~sK~~~e~~l~~~  193 (198)
                      +...|+.+|++.+.+.+..
T Consensus       167 ~~~~Y~asK~a~~~~~~~l  185 (281)
T 3s55_A          167 AQASYVSSKWGVIGLTKCA  185 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHH
Confidence            7789999999999887754

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.87  E-value=8.8e-22  Score=153.23  Aligned_cols=140  Identities=15%  Similarity=0.069  Sum_probs=110.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHHHHHHHhc---CCCEEEEcc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALD---GVTAVISCV  129 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~vi~~a  129 (198)
                      .++|+|+||||+|+||++++++|+++|++|++++|+..+... .....+++++.+|++|.+++.++++   ++|+|||||
T Consensus         5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A   84 (244)
T 1cyd_A            5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA   84 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECC
Confidence            456899999999999999999999999999999997543111 0012357788999999999999886   489999999


Q ss_pred             ccCC----------CCccceehhhHHHHHHHHHHHHc----C-CCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          130 GGFG----------SNSYMYKINGTANINAIRAASEK----G-VKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       130 g~~~----------~~~~~~~~n~~~~~~~~~a~~~~----~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      |...          .++..+++|+.+++++++++.+.    + .++||++||...-.+.++...|+.+|++.|.+++..
T Consensus        85 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~  163 (244)
T 1cyd_A           85 ALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAM  163 (244)
T ss_dssp             CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHH
Confidence            9542          12346789999999888887543    5 679999999543344556789999999999988764

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.87  E-value=1.2e-21  Score=155.95  Aligned_cols=141  Identities=16%  Similarity=0.145  Sum_probs=110.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      +.++|+++||||+|+||++++++|+++|++|++++|+..+...     .....++.++.+|++|++++.++++       
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4567899999999999999999999999999999997543111     1124578999999999998887765       


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH------cCCCEEEEeeccccCCCCCCcchHHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE------KGVKRFVYISAADFGVANYLLQGYYEGKR  184 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~------~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~  184 (198)
                      ++|+||||||...          .|+..+++|+.+++++++++..      .+.++||++||...-.+.+....|+.+|+
T Consensus       101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKa  180 (279)
T 3sju_A          101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKH  180 (279)
T ss_dssp             SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHH
Confidence            6899999999643          1345678999999999998754      45679999999654455667789999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.+.+.+..
T Consensus       181 a~~~l~~~l  189 (279)
T 3sju_A          181 GVVGFTKSV  189 (279)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999887754

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.87  E-value=5.6e-22  Score=159.62  Aligned_cols=129  Identities=19%  Similarity=0.175  Sum_probs=101.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC---cccc----cCCCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS---SLRD----SWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~---~~~~----~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      ++++|+|||||||||++|+++|+++|++|++++|+...   ....    ....+++++.+|+.          ++|+|||
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~vi~   75 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------DVRLVYH   75 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------TEEEEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------cCCEEEE
Confidence            57899999999999999999999999999999997652   1111    01234555555554          8999999


Q ss_pred             ccccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC----------CCCcchHHHHHHHHHHHH
Q 029125          128 CVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       128 ~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~----------~~~~~~Y~~sK~~~e~~l  190 (198)
                      +|+...      .+...++ |+.++.+++++|.+.++++|||+|| .+|+..          ..+.+.|+.+|+++|.++
T Consensus        76 ~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  154 (321)
T 3vps_A           76 LASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVA  154 (321)
T ss_dssp             CCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            998543      3455667 9999999999999999999999999 566642          234678999999999999


Q ss_pred             HhhC
Q 029125          191 LTRY  194 (198)
Q Consensus       191 ~~~~  194 (198)
                      +++.
T Consensus       155 ~~~~  158 (321)
T 3vps_A          155 GAHQ  158 (321)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8864

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.87  E-value=2e-21  Score=152.90  Aligned_cols=140  Identities=14%  Similarity=0.144  Sum_probs=112.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++++|+||||+|+||++++++|+++|++|++++|+..+...  .....++.++.+|++|++++.++++       ++|+
T Consensus        10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            457899999999999999999999999999999998654221  1123578999999999999988876       7999


Q ss_pred             EEEccccCCC----------------CccceehhhHHHHHHHHHHHHc----------CCCEEEEeeccccCCCCCCcch
Q 029125          125 VISCVGGFGS----------------NSYMYKINGTANINAIRAASEK----------GVKRFVYISAADFGVANYLLQG  178 (198)
Q Consensus       125 vi~~ag~~~~----------------~~~~~~~n~~~~~~~~~a~~~~----------~~~~~v~~Ss~~~~~~~~~~~~  178 (198)
                      ||||||....                +...+++|+.++.++++++...          +.++||++||.....+.++...
T Consensus        90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  169 (265)
T 2o23_A           90 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAA  169 (265)
T ss_dssp             EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHH
T ss_pred             EEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCCCch
Confidence            9999996421                2345789999999999988654          5679999999543334556789


Q ss_pred             HHHHHHHHHHHHHhh
Q 029125          179 YYEGKRAAETELLTR  193 (198)
Q Consensus       179 Y~~sK~~~e~~l~~~  193 (198)
                      |+.+|++.+.+++..
T Consensus       170 Y~~sK~a~~~~~~~l  184 (265)
T 2o23_A          170 YSASKGGIVGMTLPI  184 (265)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHH
Confidence            999999999887654

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.87  E-value=1.4e-21  Score=154.07  Aligned_cols=140  Identities=11%  Similarity=0.067  Sum_probs=110.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--cc---C-CCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DS---W-ANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~---~-~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+...  ..   . ..++.++.+|++|++++.++++       
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (263)
T 3ai3_A            5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG   84 (263)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            356899999999999999999999999999999997543111  00   0 3568899999999999888776       


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      ++|+||||||...          .|+..+++|+.+++++++++.    +.+.++||++||...-.+.++...|+.+|++.
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  164 (263)
T 3ai3_A           85 GADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAAL  164 (263)
T ss_dssp             SCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHHHHH
Confidence            7999999999642          124567899999998888874    45678999999954334456677999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       165 ~~~~~~l  171 (263)
T 3ai3_A          165 MMFSKTL  171 (263)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9888754

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.87  E-value=1.6e-21  Score=153.24  Aligned_cols=139  Identities=15%  Similarity=0.115  Sum_probs=109.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc---cCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD---SWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      ++|+++||||+|+||++++++|+++|++|++++|+.......   ....++.++.+|++|++++.++++       ++|+
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI   82 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            468999999999999999999999999999999976521111   113468889999999999988886       7999


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      ||||||...          .++..+++|+.+++++.+++    ++.+.++||++||...-.+.+....|+.+|++.+.+.
T Consensus        83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  162 (255)
T 2q2v_A           83 LVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLT  162 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHHHHHH
Confidence            999999542          12456789999888766665    5567789999999543344456789999999999887


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       163 ~~l  165 (255)
T 2q2v_A          163 KVV  165 (255)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            754

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.87  E-value=1.9e-21  Score=152.81  Aligned_cols=140  Identities=15%  Similarity=0.173  Sum_probs=109.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+.++...  .....++.++.+|++|++++.++++       ++|+
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            356899999999999999999999999999999997543111  1112467889999999999888776       7999


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHH----HHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRA----ASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a----~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      ||||||...          .|+..+++|+.+++.+.++    +++.+.++||++||...-.+.++...|+.+|++.+.+.
T Consensus        83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~  162 (254)
T 1hdc_A           83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLS  162 (254)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHHHHHHH
Confidence            999999643          1345678999999855544    45566789999999543344566789999999999887


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       163 ~~l  165 (254)
T 1hdc_A          163 KLA  165 (254)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            754

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.87  E-value=8.9e-22  Score=157.63  Aligned_cols=136  Identities=19%  Similarity=0.225  Sum_probs=110.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCcc-cccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSL-RDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~  133 (198)
                      +|+|+||||||+||++++++|+++| ++|++++|++.+.. ......+++++.+|+.|++++.++++++|+|||+++...
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~   84 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWE   84 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCc
Confidence            5799999999999999999999998 99999999865421 111135789999999999999999999999999998532


Q ss_pred             CCccceehhhHHHHHHHHHHHHcCCCEEEEeeccc-cCCC-CCCcchHHHHHHHHHHHHHhh
Q 029125          134 SNSYMYKINGTANINAIRAASEKGVKRFVYISAAD-FGVA-NYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       134 ~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~-~~~~-~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      .+  ..+.|+.++.++++++++.++++|||+|+.. ++.. ..+..+|+.+|+.+|.+++++
T Consensus        85 ~~--~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~  144 (299)
T 2wm3_A           85 SC--SQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRDI  144 (299)
T ss_dssp             HT--CHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHHHHHHHHHH
T ss_pred             cc--cchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCCcccCchhhHHHHHHHHHHHC
Confidence            21  2456788999999999999999999987743 3321 223578999999999999874

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.87  E-value=5.2e-22  Score=159.24  Aligned_cols=134  Identities=19%  Similarity=0.234  Sum_probs=108.5

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcC-----CCEEEEcccc
Q 029125           58 KLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG-----VTAVISCVGG  131 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-----~d~vi~~ag~  131 (198)
                      +|+||||+||||++++++|+++| ++|++++|......... ..++. +.+|++|.+.+..++++     +|+|||+||.
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~   78 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVN-LVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC   78 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHH-HHTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhh-cCcce-eccccccHHHHHHHHhccccCCCcEEEECccc
Confidence            58999999999999999999999 99999998765421110 11233 67899999999999875     9999999996


Q ss_pred             CC----CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC----------CCcchHHHHHHHHHHHHHhhC
Q 029125          132 FG----SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN----------YLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       132 ~~----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~----------~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                      ..    .+...+++|+.++.+++++|.+.++ +|||+|| .+|+...          .+.++|+.+|+++|.+++++.
T Consensus        79 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~  155 (310)
T 1eq2_A           79 SSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQIL  155 (310)
T ss_dssp             CCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHG
T ss_pred             ccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHH
Confidence            54    2345678999999999999999899 9999999 5565432          346789999999999998764

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.87  E-value=1.4e-21  Score=154.15  Aligned_cols=140  Identities=20%  Similarity=0.218  Sum_probs=109.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+...  ......+.++.+|++|++++.++++       ++|+
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   84 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   84 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            356899999999999999999999999999999997543211  1112347889999999999988876       7999


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      ||||||...          .++..+++|+.+++++++++    ++.+.++||++||...-.+.++...|+.+|++.+.++
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  164 (260)
T 1nff_A           85 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLT  164 (260)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHHHHHHH
Confidence            999999542          12456789999997666665    4556789999999543344556679999999999887


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       165 ~~l  167 (260)
T 1nff_A          165 KST  167 (260)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            753

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.86  E-value=1.5e-21  Score=155.64  Aligned_cols=140  Identities=17%  Similarity=0.203  Sum_probs=111.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-------ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-------~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+......       .....++.++.+|++|++++.++++      
T Consensus        23 l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            457899999999999999999999999999999985432111       1113578999999999999888775      


Q ss_pred             -CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                       ++|+||||||...          .|+..+++|+.+++++++++    .+.+.++||++||...-.+.+....|+.+|++
T Consensus       103 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  182 (281)
T 3v2h_A          103 GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHG  182 (281)
T ss_dssp             SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHHHHHH
Confidence             6899999999642          23456889999999999887    45566799999995544555667899999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+++..
T Consensus       183 ~~~l~~~l  190 (281)
T 3v2h_A          183 IMGLTKTV  190 (281)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99887754

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.86  E-value=6.2e-22  Score=154.58  Aligned_cols=130  Identities=13%  Similarity=0.050  Sum_probs=105.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc----CCCEEEEcccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD----GVTAVISCVGG  131 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~d~vi~~ag~  131 (198)
                      ||+|+||||+|+||++++++|+++|++|++++|+..+...        .+.+|++|.+++.++++    ++|+||||||.
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~   72 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGV   72 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCC
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc--------cccCCcccHHHHHHHHHHcCCCccEEEECCCC
Confidence            4789999999999999999999999999999997654211        16789999999988886    89999999996


Q ss_pred             CC---CCccceehhhHHHHHHHHHHHHc----CCCEEEEeec-cccCCC-------------------------CCCcch
Q 029125          132 FG---SNSYMYKINGTANINAIRAASEK----GVKRFVYISA-ADFGVA-------------------------NYLLQG  178 (198)
Q Consensus       132 ~~---~~~~~~~~n~~~~~~~~~a~~~~----~~~~~v~~Ss-~~~~~~-------------------------~~~~~~  178 (198)
                      ..   .+...+++|+.++.++++++.+.    +.++||++|| ..++..                         ..+...
T Consensus        73 ~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (255)
T 2dkn_A           73 GVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLA  152 (255)
T ss_dssp             CTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHH
T ss_pred             CCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchh
Confidence            43   45677899999999999987553    5689999999 445432                         135678


Q ss_pred             HHHHHHHHHHHHHhh
Q 029125          179 YYEGKRAAETELLTR  193 (198)
Q Consensus       179 Y~~sK~~~e~~l~~~  193 (198)
                      |+.+|++.|.+++..
T Consensus       153 Y~~sK~a~~~~~~~~  167 (255)
T 2dkn_A          153 YAGSKYAVTCLARRN  167 (255)
T ss_dssp             HHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999988764

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.86  E-value=2.2e-21  Score=152.72  Aligned_cols=141  Identities=16%  Similarity=0.143  Sum_probs=113.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      ..++|+++||||+|+||++++++|+++|++|++++|+......     .....++.++.+|++|++++.++++       
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   88 (256)
T 3gaf_A            9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFG   88 (256)
T ss_dssp             CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3567899999999999999999999999999999997543111     1124578999999999998887775       


Q ss_pred             CCCEEEEccccCC---------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          121 GVTAVISCVGGFG---------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       121 ~~d~vi~~ag~~~---------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      ++|+||||||...         .|+..+++|+.+++++++++.    +.+.++||++||...-.+.++...|+.+|++.+
T Consensus        89 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  168 (256)
T 3gaf_A           89 KITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVN  168 (256)
T ss_dssp             CCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHHHHHHH
Confidence            7999999999643         234568899999999998873    456679999999654455667789999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+.+..
T Consensus       169 ~~~~~l  174 (256)
T 3gaf_A          169 HLTRNI  174 (256)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888754

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.86  E-value=2.5e-21  Score=152.20  Aligned_cols=138  Identities=15%  Similarity=0.068  Sum_probs=108.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc-cCCCCeEEEEccCCCHHHHHHHhc-------CCCEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-SWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v  125 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+... ... ..... .++.+|++|++++.++++       ++|+|
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   81 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVL   81 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            356899999999999999999999999999999998654 211 00113 789999999998887765       68999


Q ss_pred             EEccccCC----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 029125          126 ISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       126 i~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      |||||...          .|+..+++|+.+++++++++..    .+.++||++||...-.+.++...|+.+|++.+.+++
T Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  161 (256)
T 2d1y_A           82 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTR  161 (256)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHHHHHHHH
Confidence            99999643          1245678999999999888743    467899999995433445667899999999998877


Q ss_pred             hh
Q 029125          192 TR  193 (198)
Q Consensus       192 ~~  193 (198)
                      ..
T Consensus       162 ~l  163 (256)
T 2d1y_A          162 SL  163 (256)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.86  E-value=6.1e-22  Score=155.17  Aligned_cols=140  Identities=19%  Similarity=0.116  Sum_probs=111.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+......  ........++.+|++|+++++++++       ++|+
T Consensus         7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   86 (248)
T 3op4_A            7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI   86 (248)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            467899999999999999999999999999999997543211  1123457889999999999888776       7999


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      +|||||...          .|+..+++|+.+++++++++..    .+.++||++||.....+.++...|+.+|++.+.+.
T Consensus        87 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~  166 (248)
T 3op4_A           87 LVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFT  166 (248)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHHHH
Confidence            999999643          2345689999999999888743    56679999999543345567789999999999877


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       167 ~~l  169 (248)
T 3op4_A          167 KSM  169 (248)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            754

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.86  E-value=2.9e-21  Score=152.69  Aligned_cols=140  Identities=12%  Similarity=0.056  Sum_probs=109.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--c---cC--CCCeEEEEccCCCHHHHHHHhc------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D---SW--ANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~---~~--~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+...  .   ..  ..++.++.+|++|++++.++++      
T Consensus        11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   90 (267)
T 1iy8_A           11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   90 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999997543111  0   00  3568899999999999888775      


Q ss_pred             -CCCEEEEccccCCC-----------CccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHH
Q 029125          121 -GVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKR  184 (198)
Q Consensus       121 -~~d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~  184 (198)
                       ++|+||||||....           |+..+++|+.+++.+.+++    ++.+.++||++||...-.+.++...|+.+|+
T Consensus        91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  170 (267)
T 1iy8_A           91 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKH  170 (267)
T ss_dssp             SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHHHHH
Confidence             68999999996432           2346789999998666654    4556789999999544344566789999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.+.+.+..
T Consensus       171 a~~~~~~~l  179 (267)
T 1iy8_A          171 GVVGLTRNS  179 (267)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999887753

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.86  E-value=3.3e-21  Score=150.62  Aligned_cols=140  Identities=9%  Similarity=-0.014  Sum_probs=109.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHh---cCCCEEEEccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL---DGVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~---~~~d~vi~~ag  130 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|++.+........++.++.+|++|++++.+++   .++|+||||||
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag   83 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence            356899999999999999999999999999999997543211111237889999999999888764   47899999999


Q ss_pred             cCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCC-CcchHHHHHHHHHHHHHhh
Q 029125          131 GFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANY-LLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       131 ~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~-~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ...          .|+..+++|+.+++++++++.    +.+.++||++||.....+.+ +...|+.+|++.+.+++..
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~l  161 (246)
T 2ag5_A           84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSV  161 (246)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHHHHHHHHHHH
Confidence            643          134467899999998888874    34678999999953222333 6779999999999888764

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.86  E-value=1.1e-21  Score=155.74  Aligned_cols=139  Identities=15%  Similarity=0.055  Sum_probs=108.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--------ccCCCCeEEEEccCCCHHHHHHHhc-----
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--------DSWANNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--------~~~~~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+...        .....++.++.+|++|++++.++++     
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999997543110        1112368899999999999888876     


Q ss_pred             --CCCEEEEccccCC--------------CCccceehhhHHHHHHHHHHHHc----CCCEEEEeecccc-CCCCCCcchH
Q 029125          121 --GVTAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEK----GVKRFVYISAADF-GVANYLLQGY  179 (198)
Q Consensus       121 --~~d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~a~~~~----~~~~~v~~Ss~~~-~~~~~~~~~Y  179 (198)
                        ++|+||||||...              .++..+++|+.+++++++++...    + ++||++||... -.+.++...|
T Consensus        84 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y  162 (278)
T 1spx_A           84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYY  162 (278)
T ss_dssp             HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHH
T ss_pred             cCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCccHH
Confidence              7999999998532              12345789999999998887543    5 79999999543 3445566789


Q ss_pred             HHHHHHHHHHHHhh
Q 029125          180 YEGKRAAETELLTR  193 (198)
Q Consensus       180 ~~sK~~~e~~l~~~  193 (198)
                      +.+|++.+.+++..
T Consensus       163 ~~sK~a~~~~~~~l  176 (278)
T 1spx_A          163 SIAKAAIDQYTRNT  176 (278)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999887754

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.86  E-value=3.3e-21  Score=151.97  Aligned_cols=140  Identities=19%  Similarity=0.119  Sum_probs=110.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+...  .....++.++.+|++|++++.++++       ++|+
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~   89 (263)
T 3ak4_A           10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL   89 (263)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            356899999999999999999999999999999997543111  1112367889999999999988876       7999


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHHHH----cC-CCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      ||||||...          .|+..+++|+.+++++++++..    .+ .++||++||.....+.++...|+.+|++.+.+
T Consensus        90 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  169 (263)
T 3ak4_A           90 LCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGW  169 (263)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHHHHHHH
Confidence            999999542          1345678999999988888754    34 57999999954444455678999999999988


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      ++..
T Consensus       170 ~~~l  173 (263)
T 3ak4_A          170 TQAL  173 (263)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7754

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.86  E-value=4.2e-21  Score=149.86  Aligned_cols=138  Identities=20%  Similarity=0.168  Sum_probs=108.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      +|+++||||+|+||++++++|+++|++|++++|+..+...      .....++.++.+|++|++++.++++       ++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999999999999999997543111      1113468899999999999888876       79


Q ss_pred             CEEEEccccCCC-------------CccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          123 TAVISCVGGFGS-------------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       123 d~vi~~ag~~~~-------------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                      |+||||||....             ++..+++|+.++.++++++    .+.+.++||++||...-.+.++...|+.+|++
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  161 (250)
T 2cfc_A           82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGA  161 (250)
T ss_dssp             CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHHH
Confidence            999999985421             2345689999998776665    34567899999995433445567899999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .|.+++..
T Consensus       162 ~~~~~~~l  169 (250)
T 2cfc_A          162 VLQLTKSV  169 (250)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99988764

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.86  E-value=3.8e-21  Score=149.85  Aligned_cols=139  Identities=13%  Similarity=0.084  Sum_probs=102.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEe-ecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASL-SRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l-~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ++++|+||||+|+||++++++|+++|++|+++ .|++.....     .....++.++.+|++|++++.++++       +
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            56899999999999999999999999999999 454332110     1123568899999999999888776       7


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|+||||||...          .++..+++|+.++.++++++.    +.+.++||++||...-.+.++...|+.+|++.|
T Consensus        84 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  163 (247)
T 2hq1_A           84 IDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLI  163 (247)
T ss_dssp             CCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHHHHH
Confidence            999999998542          345678899999988888774    356789999999532233455678999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       164 ~~~~~l  169 (247)
T 2hq1_A          164 GFTKSI  169 (247)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888764

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.86  E-value=3.4e-21  Score=151.69  Aligned_cols=140  Identities=16%  Similarity=0.070  Sum_probs=111.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+.++...     .....++.++.+|++|.+++.++++       +
T Consensus        12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   91 (260)
T 2zat_A           12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG   91 (260)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999999997543111     1113468889999999998887765       7


Q ss_pred             CCEEEEccccCC-----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          122 VTAVISCVGGFG-----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       122 ~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      +|+||||||...           .|+..+++|+.+++++++++.    +.+.++||++||...-.+.++...|+.+|++.
T Consensus        92 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  171 (260)
T 2zat_A           92 VDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTAL  171 (260)
T ss_dssp             CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHHHHH
Confidence            999999999532           124567899999998888864    45678999999954334556678999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       172 ~~~~~~l  178 (260)
T 2zat_A          172 LGLTKNL  178 (260)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9988764

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.86  E-value=2.9e-21  Score=153.04  Aligned_cols=140  Identities=12%  Similarity=0.160  Sum_probs=110.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--cc--CCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DS--WANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~--~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      .++++|+||||+|+||++++++|+++|++|++++|+......  ..  ...++.++.+|++|++++.++++       ++
T Consensus        14 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   93 (278)
T 2bgk_A           14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   93 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            467899999999999999999999999999999987533111  00  11278999999999999888876       79


Q ss_pred             CEEEEccccCCC------------CccceehhhHHHHHHHHHHHH----cCCCEEEEeecc-ccCCCCCCcchHHHHHHH
Q 029125          123 TAVISCVGGFGS------------NSYMYKINGTANINAIRAASE----KGVKRFVYISAA-DFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       123 d~vi~~ag~~~~------------~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~-~~~~~~~~~~~Y~~sK~~  185 (198)
                      |+||||||....            +...+++|+.+++++++++..    .+.++||++||. .+.....+...|+.+|++
T Consensus        94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a  173 (278)
T 2bgk_A           94 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHA  173 (278)
T ss_dssp             CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHH
T ss_pred             CEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHHHHHH
Confidence            999999996421            234678999999999988865    366799999994 444333367789999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .|.+++..
T Consensus       174 ~~~~~~~l  181 (278)
T 2bgk_A          174 VLGLTTSL  181 (278)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99988764

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.86  E-value=3.5e-21  Score=156.55  Aligned_cols=139  Identities=18%  Similarity=0.166  Sum_probs=110.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc----------ccCCCCeEEEEccCCCHHHHHHHhc----
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----------DSWANNVIWHQGNLLSSDSWKEALD----  120 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----------~~~~~~~~~~~~D~~d~~~~~~~~~----  120 (198)
                      ++|+++||||+|+||++++++|+++|++|++++|+......          .....++.++.+|++|++++.++++    
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            45799999999999999999999999999999987422100          1123578999999999999888876    


Q ss_pred             ---CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccc-cCCCCCCcchHHHH
Q 029125          121 ---GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAAD-FGVANYLLQGYYEG  182 (198)
Q Consensus       121 ---~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~-~~~~~~~~~~Y~~s  182 (198)
                         ++|+||||||...          .+...+++|+.|++++++++    ++.+.++||++||.. +....+....|+.|
T Consensus        84 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~as  163 (324)
T 3u9l_A           84 EDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAA  163 (324)
T ss_dssp             HHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHHHHH
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhHHHH
Confidence               7999999999532          23456799999999999988    556778999999943 43444556789999


Q ss_pred             HHHHHHHHHhh
Q 029125          183 KRAAETELLTR  193 (198)
Q Consensus       183 K~~~e~~l~~~  193 (198)
                      |++.|.+++..
T Consensus       164 Kaa~~~~~~~l  174 (324)
T 3u9l_A          164 KAAMDAIAVQY  174 (324)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999887754

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.86  E-value=7.9e-21  Score=156.04  Aligned_cols=132  Identities=17%  Similarity=0.161  Sum_probs=107.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc--cccCCCCeEEEEcc-CCCHHHHHHHhcCCCEEEEccccC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGN-LLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~D-~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      +|+|+||||||+||++++++|+++|++|++++|+..+..  ......+++++.+| ++|++++.++++++|+|||+++..
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~~   84 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQ   84 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCST
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCCC
Confidence            578999999999999999999999999999999865421  11112478999999 999999999999999999999754


Q ss_pred             CCCccceehhhHHHHHHHHHHHHcC-CCEEEEeecccc-CCCCCCcchHHHHHHHHHHHHHhh
Q 029125          133 GSNSYMYKINGTANINAIRAASEKG-VKRFVYISAADF-GVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       133 ~~~~~~~~~n~~~~~~~~~a~~~~~-~~~~v~~Ss~~~-~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      .     ...|..+ .+++++|++.+ +++|||+||... .....+..+|+.+|+++|+++++.
T Consensus        85 ~-----~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~~~~  141 (352)
T 1xgk_A           85 A-----GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQL  141 (352)
T ss_dssp             T-----SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHTS
T ss_pred             C-----cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCCCCCccHHHHHHHHHHHHHHc
Confidence            2     2457766 89999999998 999999999531 112244578999999999999874

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.86  E-value=3e-21  Score=150.26  Aligned_cols=140  Identities=16%  Similarity=0.045  Sum_probs=110.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHHHHHHHhc---CCCEEEEcc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALD---GVTAVISCV  129 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~vi~~a  129 (198)
                      .++++|+||||+|+||++++++|+++|++|++++|+..+... .....++.++.+|++|++++.++++   ++|+|||||
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A   84 (244)
T 3d3w_A            5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA   84 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECC
Confidence            456899999999999999999999999999999997543111 0011356788999999999999886   589999999


Q ss_pred             ccCCC----------CccceehhhHHHHHHHHHHHH----cC-CCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          130 GGFGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       130 g~~~~----------~~~~~~~n~~~~~~~~~a~~~----~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      |....          ++..+++|+.++.++++++.+    .+ .++||++||.....+.++...|+.+|++.|.+++..
T Consensus        85 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l  163 (244)
T 3d3w_A           85 AVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVM  163 (244)
T ss_dssp             CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHHHHHHHHHH
Confidence            95421          245678999999988888754    35 679999999544445566789999999999988764

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.86  E-value=2.5e-21  Score=152.10  Aligned_cols=141  Identities=11%  Similarity=0.042  Sum_probs=113.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      ..++|+++||||+++||+++++.|+++|++|++++|+++...+     .....++.++.+|++|+++++++++       
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   83 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS   83 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999999999999999999998643111     1224578999999999999887764       


Q ss_pred             CCCEEEEccccCC-----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 GVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 ~~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                      ++|++|||||...           .|+..+++|+.+++.+.+++    ++.+.++||++||...-.+.+....|+.+|++
T Consensus        84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKaa  163 (254)
T 4fn4_A           84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHG  163 (254)
T ss_dssp             CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHHH
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHHH
Confidence            6899999999532           24567899999999887776    44566799999996544556677899999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      ...+.+..
T Consensus       164 l~~ltr~l  171 (254)
T 4fn4_A          164 LIGLTRSI  171 (254)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99877653

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.86  E-value=1.5e-21  Score=153.89  Aligned_cols=139  Identities=17%  Similarity=0.097  Sum_probs=110.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEe-ecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASL-SRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l-~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ++|+++||||+|+||++++++|+++|++|+++ +|+......     .....++.++.+|++|++++.++++       +
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            56899999999999999999999999999997 665432111     1124578999999999998887765       5


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|+||||||...          .|+..+++|+.+++++++++    ++.+.++||++||...-.+.++...|+.+|++.+
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  162 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALE  162 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHHH
Confidence            799999998532          13456899999999988887    3455679999999654455667789999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+.+..
T Consensus       163 ~l~~~l  168 (258)
T 3oid_A          163 ALTRYL  168 (258)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888754

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.86  E-value=2.4e-21  Score=152.80  Aligned_cols=140  Identities=15%  Similarity=0.111  Sum_probs=105.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHh--------c
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEAL--------D  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~--------~  120 (198)
                      .++|+|+||||+|+||++++++|+++|++|++++|+..+...     .....++.++.+|++|.+++.+++        .
T Consensus        12 l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            467899999999999999999999999999999997543111     011346889999999998888776        4


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      ++|+||||||...          .+...+++|+.++.++++++    ++.+.++||++||...-.+.++...|+.+|++.
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  171 (266)
T 1xq1_A           92 KLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGAL  171 (266)
T ss_dssp             CCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHH
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHHHHHH
Confidence            6899999999532          12346789999999998888    456778999999954333445667899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      |.+++..
T Consensus       172 ~~~~~~l  178 (266)
T 1xq1_A          172 NQLARNL  178 (266)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9888764

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.86  E-value=1.5e-21  Score=154.58  Aligned_cols=141  Identities=19%  Similarity=0.133  Sum_probs=108.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      ..++|+++||||+|+||++++++|+++|++|++++|+..+...  .....++.++.+|++|++++.++++       ++|
T Consensus        24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  103 (266)
T 3grp_A           24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGID  103 (266)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCC
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            3567899999999999999999999999999999997543211  1224578999999999999888775       799


Q ss_pred             EEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          124 AVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      +||||||...          .|+..+++|+.+++++.+++    .+.+.++||++||...-.+.+....|+.+|++.+.+
T Consensus       104 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~  183 (266)
T 3grp_A          104 ILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGF  183 (266)
T ss_dssp             EEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHHHHHHHH
Confidence            9999999643          23556889999988777766    445677999999954444556678999999999987


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      .+..
T Consensus       184 ~~~l  187 (266)
T 3grp_A          184 SKAL  187 (266)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7654

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.86  E-value=4.2e-21  Score=150.93  Aligned_cols=135  Identities=21%  Similarity=0.180  Sum_probs=108.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEE
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v  125 (198)
                      ..++|+++||||+|+||++++++|+++|++|++++|+.++.      ..+.++.+|++|++++.++++       ++|+|
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~l   91 (253)
T 2nm0_A           18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP------EGFLAVKCDITDTEQVEQAYKEIEETHGPVEVL   91 (253)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC------TTSEEEECCTTSHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh------ccceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            34678999999999999999999999999999999975432      237889999999998887765       47999


Q ss_pred             EEccccCC----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 029125          126 ISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       126 i~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      |||||...          .++..+++|+.+++++++++..    .+.++||++||.....+.+....|+.+|++.+.+.+
T Consensus        92 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~  171 (253)
T 2nm0_A           92 IANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFAR  171 (253)
T ss_dssp             EEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHH
Confidence            99999532          3456788999999988887643    467799999995433344456789999999998877


Q ss_pred             hh
Q 029125          192 TR  193 (198)
Q Consensus       192 ~~  193 (198)
                      ..
T Consensus       172 ~l  173 (253)
T 2nm0_A          172 SL  173 (253)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.86  E-value=4e-21  Score=150.76  Aligned_cols=141  Identities=17%  Similarity=0.153  Sum_probs=112.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccC--CCHHHHHHHhc----
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNL--LSSDSWKEALD----  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~--~d~~~~~~~~~----  120 (198)
                      ..++|+++||||+|+||++++++|+++|++|++++|+..+...      ......+.++.+|+  +|.+++.++++    
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999998543111      11123678999999  88888877765    


Q ss_pred             ---CCCEEEEccccCC-----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHH
Q 029125          121 ---GVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEG  182 (198)
Q Consensus       121 ---~~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~s  182 (198)
                         ++|+||||||...           .|+..+++|+.+++++++++    ++.+.++||++||...-.+.+....|+.+
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  168 (252)
T 3f1l_A           89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAAS  168 (252)
T ss_dssp             HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhHHH
Confidence               6899999999642           12456899999999999887    44567799999996544556667899999


Q ss_pred             HHHHHHHHHhh
Q 029125          183 KRAAETELLTR  193 (198)
Q Consensus       183 K~~~e~~l~~~  193 (198)
                      |++.+.+.+..
T Consensus       169 K~a~~~l~~~l  179 (252)
T 3f1l_A          169 KFATEGMMQVL  179 (252)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999887754

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.86  E-value=3.6e-21  Score=151.45  Aligned_cols=138  Identities=17%  Similarity=0.214  Sum_probs=109.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC--ccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS--SLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~--~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      +|+++||||+|+||++++++|+++|++|++++|+...  ...     .....++.++.+|++|++++.++++       +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999997543  111     1113568899999999998888775       7


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cCC-CEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGV-KRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~~-~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      +|+||||||...          .|+..+++|+.+++++++++..    .+. ++||++||...-.+.+....|+.+|++.
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  161 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAV  161 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHHH
Confidence            999999999643          1345678999999988888754    356 7999999954334456678999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+.+..
T Consensus       162 ~~~~~~l  168 (258)
T 3a28_C          162 RGLTQAA  168 (258)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9887754

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.86  E-value=2.3e-21  Score=153.40  Aligned_cols=140  Identities=14%  Similarity=0.042  Sum_probs=111.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+...     .....++.++.+|++|++++.++++       +
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            356899999999999999999999999999999998543111     1123568899999999998887765       6


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|+||||||...          .|+..+++|+.+++++++++.    +.+.++||++||...-.+.+....|+.+|++.+
T Consensus        82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~  161 (264)
T 3tfo_A           82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVR  161 (264)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHHH
Confidence            899999999643          234567999999998888763    356679999999654455666788999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+.+..
T Consensus       162 ~l~~~l  167 (264)
T 3tfo_A          162 AISDGL  167 (264)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887754

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.86  E-value=1.9e-21  Score=152.37  Aligned_cols=137  Identities=18%  Similarity=0.117  Sum_probs=109.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS  127 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~  127 (198)
                      |+++||||+|+||++++++|+++|++|++++|+..+...  .....++.++.+|++|++++.++++       ++|+|||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            579999999999999999999999999999997543111  1113468899999999999998875       5899999


Q ss_pred             ccccCC-----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          128 CVGGFG-----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       128 ~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      |||...           .++..+++|+.+++++++++.    +.+.++||++||.....+.++...|+.+|++.+.+.+.
T Consensus        81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~  160 (248)
T 3asu_A           81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN  160 (248)
T ss_dssp             CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHHHHHH
Confidence            999642           124567899999998888875    45678999999955444556678999999999998775


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       161 l  161 (248)
T 3asu_A          161 L  161 (248)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.86  E-value=2.2e-21  Score=154.53  Aligned_cols=140  Identities=16%  Similarity=0.087  Sum_probs=112.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+......  .....++.++.+|++|++++.++++       ++|+
T Consensus        27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            467899999999999999999999999999999997543211  1224578999999999998887765       6899


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      ||||||...          .++..+++|+.+++++++++..    .+.++||++||.....+.++...|+.+|++.+.+.
T Consensus       107 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~  186 (277)
T 3gvc_A          107 LVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLS  186 (277)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHHHHHHHH
Confidence            999999643          1345688999999988888743    55679999999654555667789999999999887


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       187 ~~l  189 (277)
T 3gvc_A          187 RIT  189 (277)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            743

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.86  E-value=4e-21  Score=153.40  Aligned_cols=140  Identities=16%  Similarity=0.135  Sum_probs=111.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++++++||||+|+||++++++|+++|++|++++|+......     .....++.++.+|++|++++.++++       +
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (283)
T 3v8b_A           26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH  105 (283)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            457899999999999999999999999999999997543111     1123578899999999998887775       6


Q ss_pred             CCEEEEccccCC-----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCC--CCCCcchHHHHHH
Q 029125          122 VTAVISCVGGFG-----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGV--ANYLLQGYYEGKR  184 (198)
Q Consensus       122 ~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~--~~~~~~~Y~~sK~  184 (198)
                      +|+||||||...           .|+..+++|+.+++++++++    ++.+.++||++||.....  +.++...|+.+|+
T Consensus       106 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~asKa  185 (283)
T 3v8b_A          106 LDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKA  185 (283)
T ss_dssp             CCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHHHHHH
Confidence            999999999642           12456899999999999887    556678999999954322  4566789999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.+.+.+..
T Consensus       186 a~~~l~~~l  194 (283)
T 3v8b_A          186 AQVAIVQQL  194 (283)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999887754

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.86  E-value=1.2e-21  Score=153.33  Aligned_cols=140  Identities=16%  Similarity=0.126  Sum_probs=112.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+......  .....++.++.+|++|++++.++++       ++|+
T Consensus         4 l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   83 (247)
T 3rwb_A            4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI   83 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            467899999999999999999999999999999997543211  1124578999999999999888776       6999


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHH----HHcC-CCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKG-VKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      ||||||...          .|+..+++|+.+++++++++    ++.+ .++||++||.....+.+....|+.+|++.+.+
T Consensus        84 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  163 (247)
T 3rwb_A           84 LVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGF  163 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHHHHHH
Confidence            999999643          23456899999999988884    4445 57999999955444556678999999999988


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      .+..
T Consensus       164 ~~~l  167 (247)
T 3rwb_A          164 TRAL  167 (247)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7754

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.86  E-value=3e-21  Score=153.23  Aligned_cols=125  Identities=18%  Similarity=0.179  Sum_probs=100.9

Q ss_pred             eEEEEcCCchhHHHHHHHHHHC--CCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCCCC
Q 029125           58 KLLVLGGNGFVGSHICREALDR--GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSN  135 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~  135 (198)
                      +|+||||+|+||++++++|+++  |++|++++|++.+... ....+++++.+|++|++++.++++++|+|||+++...  
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~--   77 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA-LAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEV--   77 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH-HHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh-hhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCc--
Confidence            5899999999999999999998  9999999998654221 1124688999999999999999999999999998531  


Q ss_pred             ccceehhhHHHHHHHHHHHHcCCCEEEEeecc-ccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          136 SYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       136 ~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~-~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                          ..|+.++.+++++|++.++++|||+||. ++    ....+|+.+|.++|.++++.
T Consensus        78 ----~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~----~~~~~y~~sK~~~e~~~~~~  128 (286)
T 2zcu_A           78 ----GQRAPQHRNVINAAKAAGVKFIAYTSLLHAD----TSPLGLADEHIETEKMLADS  128 (286)
T ss_dssp             --------CHHHHHHHHHHHHTCCEEEEEEETTTT----TCCSTTHHHHHHHHHHHHHH
T ss_pred             ----hHHHHHHHHHHHHHHHcCCCEEEEECCCCCC----CCcchhHHHHHHHHHHHHHc
Confidence                2578899999999999999999999994 34    22358999999999998764

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.86  E-value=3.3e-22  Score=171.41  Aligned_cols=139  Identities=18%  Similarity=0.273  Sum_probs=111.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc-----------------cccCCCCeEEEEccCCCHHHHH
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-----------------RDSWANNVIWHQGNLLSSDSWK  116 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~-----------------~~~~~~~~~~~~~D~~d~~~~~  116 (198)
                      ..+++|+|||||||||++|+++|+++|++|+|++|+..+..                 ......+++++.+|+.|++.+.
T Consensus       148 ~~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  227 (508)
T 4f6l_B          148 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  227 (508)
T ss_dssp             CCCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred             CCCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence            45789999999999999999999999999999999876210                 0112468999999999977777


Q ss_pred             HHhcCCCEEEEccccCC---CCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCC------------------CCC
Q 029125          117 EALDGVTAVISCVGGFG---SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVA------------------NYL  175 (198)
Q Consensus       117 ~~~~~~d~vi~~ag~~~---~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~------------------~~~  175 (198)
                       ++.++|+|||+||...   .+...+++|+.++.+++++|.+ +.++|||+||...|..                  ..+
T Consensus       228 -~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~  305 (508)
T 4f6l_B          228 -LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLL  305 (508)
T ss_dssp             -CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCC
T ss_pred             -CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhhccCCccCCcCcccccccccccccC
Confidence             7789999999999653   4566788999999999999988 7789999999433221                  225


Q ss_pred             cchHHHHHHHHHHHHHhhC
Q 029125          176 LQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       176 ~~~Y~~sK~~~e~~l~~~~  194 (198)
                      .+.|+.+|+++|.+++++.
T Consensus       306 ~~~Y~~sK~~~E~~~~~~~  324 (508)
T 4f6l_B          306 TSPYTRSKFYSELKVLEAV  324 (508)
T ss_dssp             CSHHHHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHH
Confidence            6899999999999998753

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.86  E-value=2.3e-21  Score=150.04  Aligned_cols=138  Identities=15%  Similarity=0.136  Sum_probs=109.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc--cccCCCCeEEEEccCCCHHHHHHHhcCC----CEEEEcc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALDGV----TAVISCV  129 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~~~----d~vi~~a  129 (198)
                      ||+|+||||+|+||++++++|+++|++|++++|+..+..  ......++.++.+|++|.+++.++++.+    |+|||||
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A   80 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA   80 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence            578999999999999999999999999999999864321  1222457889999999999999988754    9999999


Q ss_pred             ccCC----------CCccceehhhHHHHHHHHHHHHcC---CCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          130 GGFG----------SNSYMYKINGTANINAIRAASEKG---VKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       130 g~~~----------~~~~~~~~n~~~~~~~~~a~~~~~---~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      |...          .++..+++|+.+++++++++....   ..+||++||.....+.+....|+.+|++.+.+.+..
T Consensus        81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l  157 (230)
T 3guy_A           81 GSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESV  157 (230)
T ss_dssp             CCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCCchhHHHHHHHHHHHHHH
Confidence            9542          124567899999999999885532   239999999655556667789999999999887754

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.86  E-value=2.5e-21  Score=152.49  Aligned_cols=139  Identities=15%  Similarity=0.142  Sum_probs=110.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC-ccc--cc---C-CCCeEEEEccCCCHHHHHHHhc-------
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS-SLR--DS---W-ANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~-~~~--~~---~-~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      ++|+++||||+|+||++++++|+++|++|++++|+... ...  ..   . ..++.++.+|++|++++.++++       
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            46899999999999999999999999999999997643 111  00   0 3468899999999999888775       


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      ++|+||||||...          .|+..+++|+.+++++++++.    +.+.++||++||...-.+.++...|+.+|++.
T Consensus        83 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  162 (260)
T 1x1t_A           83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGV  162 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHHHH
Confidence            6999999999543          124567899999998888874    34678999999954334456678999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       163 ~~~~~~l  169 (260)
T 1x1t_A          163 VGFTKVT  169 (260)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9887753

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.86  E-value=5e-21  Score=151.67  Aligned_cols=141  Identities=13%  Similarity=0.083  Sum_probs=113.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      ..++|+++||||+|+||++++++|+++|++|++++++.....+      .....++.++.+|++|++++.++++      
T Consensus        15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   94 (270)
T 3is3_A           15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF   94 (270)
T ss_dssp             CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4567899999999999999999999999999998876433111      1124578999999999999888775      


Q ss_pred             -CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHHcCC--CEEEEeeccc-cCCCCCCcchHHHHHHHH
Q 029125          121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEKGV--KRFVYISAAD-FGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~~~--~~~v~~Ss~~-~~~~~~~~~~Y~~sK~~~  186 (198)
                       ++|++|||||...          .|+..+++|+.+++++++++.....  ++||++||.. ...+.++...|+.+|++.
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~  174 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAV  174 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTTCHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCCCchhHHHHHHH
Confidence             6899999999643          2345689999999999999977543  4999999955 445566778999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+.+..
T Consensus       175 ~~~~~~l  181 (270)
T 3is3_A          175 DSFVRIF  181 (270)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9887754

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.86  E-value=6e-21  Score=151.61  Aligned_cols=141  Identities=14%  Similarity=0.057  Sum_probs=111.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc----ccCCCCeEEEEccCCCHHHHHHHhc------CC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALD------GV  122 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~------~~  122 (198)
                      ..++|+++||||+|+||++++++|+++|++|++++|.......    .....++.++.+|++|.+++.++.+      ++
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~i  107 (273)
T 3uf0_A           28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRV  107 (273)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence            3567899999999999999999999999999999976422110    1123568899999999988877654      79


Q ss_pred             CEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      |+||||||...          .|+..+++|+.+++++++++    .+.+.++||++||...-.+.++...|+.+|++.+.
T Consensus       108 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~  187 (273)
T 3uf0_A          108 DVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVG  187 (273)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHHHHHHH
T ss_pred             cEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHHHHHHH
Confidence            99999999643          13456899999999988887    34567799999996544556677899999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +.+..
T Consensus       188 l~~~l  192 (273)
T 3uf0_A          188 LTRAL  192 (273)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87754

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.86  E-value=4.4e-21  Score=153.23  Aligned_cols=140  Identities=13%  Similarity=0.129  Sum_probs=111.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------------ccCCCCeEEEEccCCCHHHHHHHhc-
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------------DSWANNVIWHQGNLLSSDSWKEALD-  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------------~~~~~~~~~~~~D~~d~~~~~~~~~-  120 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+...            .....++.++.+|++|++++.++++ 
T Consensus         7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999998653111            1113568999999999999888776 


Q ss_pred             ------CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHHc----CCCEEEEeeccccCCC-CCCcchH
Q 029125          121 ------GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK----GVKRFVYISAADFGVA-NYLLQGY  179 (198)
Q Consensus       121 ------~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~----~~~~~v~~Ss~~~~~~-~~~~~~Y  179 (198)
                            ++|++|||||...          .|+..+++|+.+++++++++...    +.++||++||.....+ ......|
T Consensus        87 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y  166 (285)
T 3sc4_A           87 TVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPY  166 (285)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCSHHH
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCCchH
Confidence                  7999999999642          12456789999999999988654    5569999999543333 2556889


Q ss_pred             HHHHHHHHHHHHhh
Q 029125          180 YEGKRAAETELLTR  193 (198)
Q Consensus       180 ~~sK~~~e~~l~~~  193 (198)
                      +.||++.+.+.+..
T Consensus       167 ~asKaal~~~~~~l  180 (285)
T 3sc4_A          167 MMAKYGMTLCALGI  180 (285)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999887754

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.86  E-value=3e-21  Score=153.54  Aligned_cols=140  Identities=17%  Similarity=0.088  Sum_probs=111.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|++.....     .....++.++.+|++|++++.++++       +
T Consensus        20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   99 (277)
T 2rhc_B           20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP   99 (277)
T ss_dssp             TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            456899999999999999999999999999999997543111     0113468899999999998887775       6


Q ss_pred             CCEEEEccccCCC----------CccceehhhHHHHHHHHHHHHc------CCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK------GVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~~------~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                      +|+||||||....          |+..+++|+.+++++++++...      +.++||++||...-.+.++...|+.+|++
T Consensus       100 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  179 (277)
T 2rhc_B          100 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHG  179 (277)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHHHH
Confidence            8999999996431          2456789999999999987554      56799999995433445667889999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+++..
T Consensus       180 ~~~~~~~l  187 (277)
T 2rhc_B          180 VVGFTKAL  187 (277)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99887754

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.86  E-value=1.8e-21  Score=154.44  Aligned_cols=141  Identities=14%  Similarity=0.055  Sum_probs=113.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      ..++|+++||||+|+||++++++|+++|++|++++|+......     .....++.++.+|++|++++.++++       
T Consensus        23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  102 (271)
T 4ibo_A           23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI  102 (271)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            3567899999999999999999999999999999997543111     1124578999999999999888876       


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      ++|+||||||...          .|+..+++|+.+++++++++..    .+.++||++||.....+.++...|+.+|++.
T Consensus       103 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~  182 (271)
T 4ibo_A          103 DVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGI  182 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHHHHH
Confidence            6899999999642          2345689999999988777643    4667999999965555666778999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       183 ~~l~~~l  189 (271)
T 4ibo_A          183 KMLTRAM  189 (271)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9887754

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.86  E-value=1e-20  Score=148.06  Aligned_cols=134  Identities=19%  Similarity=0.138  Sum_probs=105.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi  126 (198)
                      .++|+|+||||+|+||++++++|+++|++|++++|+..+..      .+..+.+|++|++++.++++       ++|+||
T Consensus        13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   86 (247)
T 1uzm_A           13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLV   86 (247)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH------HhcCeeccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            46789999999999999999999999999999999764421      22248899999998887765       589999


Q ss_pred             EccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          127 SCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       127 ~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      ||||...          .++..+++|+.+++++++++.    +.+.++||++||...-.+.+....|+.+|++.+.+.+.
T Consensus        87 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  166 (247)
T 1uzm_A           87 SNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARS  166 (247)
T ss_dssp             EECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHHHHHHHHHH
Confidence            9999643          234567899999998888874    35678999999954333445667899999999988775


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       167 l  167 (247)
T 1uzm_A          167 I  167 (247)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.86  E-value=5.2e-21  Score=150.18  Aligned_cols=140  Identities=14%  Similarity=0.083  Sum_probs=109.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++++|+||||+|+||++++++|+++|++|++++|+......     .....++.++.+|++|++++.++++       +
T Consensus        11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (260)
T 3awd_A           11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR   90 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            456899999999999999999999999999999997543111     1113568999999999999888775       6


Q ss_pred             CCEEEEccccCC-C----------CccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCC--CCCCcchHHHHHH
Q 029125          122 VTAVISCVGGFG-S----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGV--ANYLLQGYYEGKR  184 (198)
Q Consensus       122 ~d~vi~~ag~~~-~----------~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~--~~~~~~~Y~~sK~  184 (198)
                      +|+||||||... .          +...+++|+.+++++++++..    .+.++||++||.....  +..+...|+.+|+
T Consensus        91 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~~sK~  170 (260)
T 3awd_A           91 VDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKA  170 (260)
T ss_dssp             CCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccHHHHH
Confidence            899999999543 1          134578999999998888754    4677999999943222  2233378999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.|.+++..
T Consensus       171 a~~~~~~~l  179 (260)
T 3awd_A          171 GVHQYIRSL  179 (260)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999988764

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.86  E-value=3.1e-21  Score=149.44  Aligned_cols=139  Identities=15%  Similarity=0.108  Sum_probs=107.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi  126 (198)
                      ++++|+||||+|+||++++++|+++|++|++++|+..+... .....++.++.+|++|.+++.++++       ++|+||
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            35789999999999999999999999999999997543111 0011368899999999998887765       689999


Q ss_pred             EccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          127 SCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       127 ~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      ||||...          .+...+++|+.+++++++.+    ++.+.++||++||.....+.++...|+.+|++.+.+++.
T Consensus        84 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  163 (234)
T 2ehd_A           84 NNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGA  163 (234)
T ss_dssp             ECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHHHHHHH
Confidence            9999542          12446789999998665554    556678999999954334556678999999999987765


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       164 l  164 (234)
T 2ehd_A          164 A  164 (234)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.86  E-value=3.1e-21  Score=149.75  Aligned_cols=131  Identities=19%  Similarity=0.169  Sum_probs=106.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc------CCCEEEEcc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD------GVTAVISCV  129 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d~vi~~a  129 (198)
                      +|+|+||||+|+||++++++|+++|++|++++|+..       ..++.++.+|++|++++.++++      ++|+|||||
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~a   74 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-------GEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAA   74 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-------SSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-------ccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcc
Confidence            578999999999999999999999999999999764       1345899999999999998887      789999999


Q ss_pred             ccCC--------------CCccceehhhHHHHHHHHHHHHc----C------CCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          130 GGFG--------------SNSYMYKINGTANINAIRAASEK----G------VKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       130 g~~~--------------~~~~~~~~n~~~~~~~~~a~~~~----~------~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                      |...              .+...+++|+.++.++++++.+.    +      .++||++||.....+.++...|+.+|++
T Consensus        75 g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  154 (242)
T 1uay_A           75 GVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGG  154 (242)
T ss_dssp             CCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             cccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchhhHHHHH
Confidence            9542              22445789999999999988653    1      1299999995433345567899999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+++..
T Consensus       155 ~~~~~~~l  162 (242)
T 1uay_A          155 VVALTLPA  162 (242)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99887654

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.86  E-value=6.2e-21  Score=148.47  Aligned_cols=139  Identities=14%  Similarity=0.067  Sum_probs=108.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc---------C
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD---------G  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~---------~  121 (198)
                      ++++|+||||+|+||++++++|+++|  ++|++++|+......  .....++.++.+|++|.+++.++++         +
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            35799999999999999999999999  999999997544211  1113578999999999999888876         8


Q ss_pred             CCEEEEccccCC-C----------CccceehhhHHHHHHHHHHHHc----------C-----CCEEEEeeccc-cCCCC-
Q 029125          122 VTAVISCVGGFG-S----------NSYMYKINGTANINAIRAASEK----------G-----VKRFVYISAAD-FGVAN-  173 (198)
Q Consensus       122 ~d~vi~~ag~~~-~----------~~~~~~~n~~~~~~~~~a~~~~----------~-----~~~~v~~Ss~~-~~~~~-  173 (198)
                      +|+||||||... .          +...+++|+.+++++++++...          +     .++||++||.. +.... 
T Consensus        82 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  161 (250)
T 1yo6_A           82 LSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT  161 (250)
T ss_dssp             CCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC
T ss_pred             CcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCcc
Confidence            999999998643 1          2345789999999888887432          4     67999999943 22211 


Q ss_pred             -----CCcchHHHHHHHHHHHHHhh
Q 029125          174 -----YLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       174 -----~~~~~Y~~sK~~~e~~l~~~  193 (198)
                           .+...|+.+|++.+.+++..
T Consensus       162 ~~~~~~~~~~Y~~sK~a~~~~~~~l  186 (250)
T 1yo6_A          162 SGSAQFPVLAYRMSKAAINMFGRTL  186 (250)
T ss_dssp             STTSSSCBHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCccHHHHHHHHHHHHHHHH
Confidence                 46678999999999988754

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.85  E-value=1.9e-21  Score=151.30  Aligned_cols=138  Identities=15%  Similarity=0.087  Sum_probs=108.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi  126 (198)
                      +|+++||||+|+||++++++|+++|++|++++|+..+...  .....++.++.+|++|++++.++++       ++|+||
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv   82 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL   82 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence            5799999999999999999999999999999998543111  1112368999999999998887765       689999


Q ss_pred             EccccCC----------CCccceehhhHHHHHHHHHHHHc---CCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          127 SCVGGFG----------SNSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       127 ~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~---~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ||||...          .|+..+++|+.+++++++++...   ...+||++||...-.+.+....|+.||++.+.+.+..
T Consensus        83 nnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l  162 (235)
T 3l6e_A           83 HCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESL  162 (235)
T ss_dssp             EECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSHHHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCCcHHHHHHHHHHHHHHHH
Confidence            9999632          23456899999999888888432   1239999999554445566789999999999887754

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.85  E-value=3e-21  Score=152.99  Aligned_cols=140  Identities=15%  Similarity=0.065  Sum_probs=110.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+.....+      .....++.++.+|++|.+++.++++       
T Consensus        26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g  105 (269)
T 4dmm_A           26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG  105 (269)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999985432111      1124578999999999999888775       


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      ++|+||||||...          .|+..+++|+.+++++++++    .+.+.++||++||...-.+.+....|+.+|++.
T Consensus       106 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  185 (269)
T 4dmm_A          106 RLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGV  185 (269)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHHHHHH
Confidence            7899999999643          23456889999999988887    345667999999954334455678999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+.+..
T Consensus       186 ~~l~~~l  192 (269)
T 4dmm_A          186 IGLTKTV  192 (269)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9877654

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.85  E-value=5.4e-21  Score=149.60  Aligned_cols=139  Identities=17%  Similarity=0.061  Sum_probs=109.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+......     .....++.++.+|++|++++.++++       +
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   84 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG   84 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            356899999999999999999999999999999997543111     0113468899999999998887765       7


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|+||||||...          .|+..+++|+.+++++++++.    +.+ ++||++||.....+.+....|+.+|++.+
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~  163 (247)
T 2jah_A           85 LDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFGVN  163 (247)
T ss_dssp             CSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHHHHH
Confidence            999999999542          124467899999999888874    345 79999999544445566789999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+.+..
T Consensus       164 ~~~~~l  169 (247)
T 2jah_A          164 AFSETL  169 (247)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            877653

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.85  E-value=2.5e-21  Score=152.62  Aligned_cols=139  Identities=13%  Similarity=0.157  Sum_probs=110.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .+|+++||||+|+||.+++++|+++|++|++++|+......      .....++.++.+|++|++++.++++       +
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999887543111      1123578999999999999888776       7


Q ss_pred             CCEEEEcccc--CC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeecc-cc-CCCCCCcchHHHHH
Q 029125          122 VTAVISCVGG--FG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAA-DF-GVANYLLQGYYEGK  183 (198)
Q Consensus       122 ~d~vi~~ag~--~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~-~~-~~~~~~~~~Y~~sK  183 (198)
                      +|+||||||.  ..          .+...+++|+.+++++++++    ++.+.++||++||. .+ ..+..+...|+.+|
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~asK  165 (264)
T 3i4f_A           86 IDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAK  165 (264)
T ss_dssp             CCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHHHHH
T ss_pred             CCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhHHHH
Confidence            8999999993  21          12456789999999999988    55677899999986 44 33445668999999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      ++.+.+++..
T Consensus       166 aa~~~~~~~l  175 (264)
T 3i4f_A          166 VGLVSLTKTV  175 (264)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999887754

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.85  E-value=4.5e-21  Score=151.03  Aligned_cols=140  Identities=17%  Similarity=0.114  Sum_probs=110.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--cc----C-CCCeEEEEccCCCHHHHHHHhc------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DS----W-ANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~----~-~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+...  ..    . ..++.++.+|++|++++.++++      
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (260)
T 2z1n_A            5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG   84 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            356899999999999999999999999999999997543111  00    0 2268899999999999988876      


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      ++|+||||||...          .|+..+++|+.+++++.+++    .+.+.++||++||...-.+.++...|+.+|++.
T Consensus        85 gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  164 (260)
T 2z1n_A           85 GADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPV  164 (260)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHTHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHHHHHH
Confidence            6999999999532          23456789999998777766    345678999999954434556678999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+.+..
T Consensus       165 ~~~~~~l  171 (260)
T 2z1n_A          165 IGVVRTL  171 (260)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9887754

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.85  E-value=7e-21  Score=148.97  Aligned_cols=138  Identities=14%  Similarity=0.197  Sum_probs=110.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS  127 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~  127 (198)
                      +|+|+||||+++||+++++.|+++|++|++++|+++...+ .....++..+.+|++|+++++++++       ++|++||
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN   81 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN   81 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4799999999999999999999999999999998544221 1224578899999999998887764       6899999


Q ss_pred             ccccCC----------CCccceehhhHHHHHHHHHHHHc---CCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          128 CVGGFG----------SNSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       128 ~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~---~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      |||...          .|+..+++|+.+++.+.+++...   +..+||++||...-.+.+....|+.||++...+.+..
T Consensus        82 NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk~l  160 (247)
T 3ged_A           82 NACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHAL  160 (247)
T ss_dssp             CCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCCHHHHHHHHHHHHHHHHH
Confidence            998542          35667899999999888877432   3379999999655556667789999999999877654

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.85  E-value=6.5e-21  Score=151.26  Aligned_cols=140  Identities=18%  Similarity=0.082  Sum_probs=110.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHh--------c
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEAL--------D  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~--------~  120 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+...     .....++.++.+|++|++++.+++        .
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999999999997543111     111346889999999999888776        4


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      ++|+||||||...          .++..+++|+.+++++++++.    +.+.++||++||...-.+.+....|+.+|++.
T Consensus        99 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  178 (273)
T 1ae1_A           99 KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAI  178 (273)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHHHHHH
Confidence            6899999999642          124457899999999988873    45667999999954334456678999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+.+..
T Consensus       179 ~~~~~~l  185 (273)
T 1ae1_A          179 NQMTKSL  185 (273)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9887754

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.85  E-value=3.8e-21  Score=150.34  Aligned_cols=138  Identities=14%  Similarity=0.048  Sum_probs=108.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS  127 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~  127 (198)
                      ++|+++||||+|+||++++++|+++|++|++++|+..+........++.++.+|++|++++.++++       ++|+|||
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn   83 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            568999999999999999999999999999999975432111001137889999999998887765       4899999


Q ss_pred             ccccCC----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          128 CVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       128 ~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      |||...          .|+..+++|+.+++++++++..    .+.++||++||.. ..+.+....|+.+|++.+.+.+..
T Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a~~~~~~~l  162 (245)
T 1uls_A           84 YAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAGVVGLTRTL  162 (245)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHHHHHHHHHH
Confidence            999643          1345678999999998888754    3567999999965 344456678999999999877653

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.85  E-value=5e-21  Score=148.41  Aligned_cols=139  Identities=17%  Similarity=0.091  Sum_probs=110.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ++|+++||||+|+||++++++|+++|++|++++|+..+...      .....++.++.+|++|++++.++++       +
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            36899999999999999999999999999999997543111      1224578999999999999998876       6


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH---cCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~---~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      +|+||||||...          .+...+++|+.+++++++++..   .+.+++|++||.....+.+....|+.+|++.+.
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~  160 (235)
T 3l77_A           81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARA  160 (235)
T ss_dssp             CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTCHHHHHHHHHHHH
T ss_pred             CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCcchHHHHHHHHHH
Confidence            899999999642          1245678999999999998854   234578888885545555667799999999999


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       161 ~~~~l  165 (235)
T 3l77_A          161 LVRTF  165 (235)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.85  E-value=5.2e-21  Score=152.53  Aligned_cols=140  Identities=13%  Similarity=0.094  Sum_probs=111.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+......     .....++.++.+|++|++++.++++       +
T Consensus         6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999999999998543111     1123578899999999998888775       7


Q ss_pred             CCEEEEccccCC-----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeecc-ccCCCCCCcchHHHHHHH
Q 029125          122 VTAVISCVGGFG-----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAA-DFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       122 ~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~-~~~~~~~~~~~Y~~sK~~  185 (198)
                      +|+||||||...           .++..+++|+.+++++++++.    +.+.++||++||. .+..+.+....|+.+|++
T Consensus        86 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa  165 (280)
T 3tox_A           86 LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAG  165 (280)
T ss_dssp             CCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHHHHH
Confidence            999999999642           134568999999999888874    3456699999994 343556677899999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+.+..
T Consensus       166 ~~~l~~~l  173 (280)
T 3tox_A          166 LIGLVQAL  173 (280)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99887754

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.85  E-value=8.7e-21  Score=150.83  Aligned_cols=140  Identities=14%  Similarity=0.122  Sum_probs=112.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc------CC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD------GV  122 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~------~~  122 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+......     .....++.++.+|++|.+++.++++      ++
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~i  110 (275)
T 4imr_A           31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPV  110 (275)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            467899999999999999999999999999999998654221     1124578999999999988887775      68


Q ss_pred             CEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      |++|||||...          .|+..+++|+.+++++++++    .+.+.++||++||...-.+......|+.||++.+.
T Consensus       111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~  190 (275)
T 4imr_A          111 DILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHN  190 (275)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHHHHHH
Confidence            99999999532          23456789999999988887    34566799999995433455666789999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +.+..
T Consensus       191 l~~~l  195 (275)
T 4imr_A          191 LIQSQ  195 (275)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87754

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.85  E-value=5.6e-21  Score=151.72  Aligned_cols=140  Identities=14%  Similarity=0.099  Sum_probs=108.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++|+|+||||+|+||++++++|+++|++|++++|+......     .....++.++.+|++|.+++.++++       +
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  111 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT  111 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            457899999999999999999999999999999998654211     0113468899999999999888775       4


Q ss_pred             CCEEEEccccCCC------------CccceehhhHHHH----HHHHHHHHcCCCEEEEeeccccCCC--CCCcchHHHHH
Q 029125          122 VTAVISCVGGFGS------------NSYMYKINGTANI----NAIRAASEKGVKRFVYISAADFGVA--NYLLQGYYEGK  183 (198)
Q Consensus       122 ~d~vi~~ag~~~~------------~~~~~~~n~~~~~----~~~~a~~~~~~~~~v~~Ss~~~~~~--~~~~~~Y~~sK  183 (198)
                      +|+||||||....            +...+++|+.+++    .+++.+++.+.++||++||.....+  .++...|+.+|
T Consensus       112 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK  191 (279)
T 3ctm_A          112 IDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAK  191 (279)
T ss_dssp             CSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHHHHH
T ss_pred             CCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHHHHH
Confidence            8999999996432            1235678999965    5556666677889999999543233  55677899999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      ++.|.+++..
T Consensus       192 ~a~~~~~~~l  201 (279)
T 3ctm_A          192 AACTHLAKSL  201 (279)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999988764

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.85  E-value=6e-21  Score=151.58  Aligned_cols=140  Identities=14%  Similarity=0.069  Sum_probs=110.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      ..+|+++||||+|+||++++++|+++|++|++++|+......  .....++.++.+|++|++++.++++       ++|+
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            457899999999999999999999999999999997543111  1123578999999999999888776       7999


Q ss_pred             EEEccccCCC-----------CccceehhhHHHHHHHHHHHH----cC--CCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          125 VISCVGGFGS-----------NSYMYKINGTANINAIRAASE----KG--VKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       125 vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~~----~~--~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      ||||||....           |+..+++|+.+++++++++..    .+  .++||++||.....+.++...|+.+|++.+
T Consensus       106 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~  185 (272)
T 4dyv_A          106 LFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAIT  185 (272)
T ss_dssp             EEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHHHHHH
Confidence            9999996421           245688999999988887743    33  469999999654455667789999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+.+..
T Consensus       186 ~l~~~l  191 (272)
T 4dyv_A          186 GLTKST  191 (272)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887754

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.85  E-value=1.8e-21  Score=151.67  Aligned_cols=140  Identities=20%  Similarity=0.139  Sum_probs=109.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--cc----CCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DS----WANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~----~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++++++||||+|+||++++++|+++|++|++++|+..+...  ..    ...++.++.+|++|++++.++++       
T Consensus         5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (248)
T 2pnf_A            5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD   84 (248)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            356899999999999999999999999999999997543111  00    13568899999999999988876       


Q ss_pred             CCCEEEEccccCCC----------CccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 ~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      ++|+||||||....          +...+++|+.+++++++++    .+.+.++||++||...-.+.++...|+.+|++.
T Consensus        85 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  164 (248)
T 2pnf_A           85 GIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGL  164 (248)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHHHHH
Confidence            79999999996431          2356789999998777765    345678999999943222334567899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       165 ~~~~~~l  171 (248)
T 2pnf_A          165 IGFTKSL  171 (248)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9887754

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.85  E-value=1.1e-20  Score=149.87  Aligned_cols=141  Identities=17%  Similarity=0.147  Sum_probs=111.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      ..++|+++||||+|+||++++++|+++|++|++++++.....+      .....++.++.+|++|++++.++++      
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (271)
T 3v2g_A           28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL  107 (271)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3567899999999999999999999999999999776432111      1124578899999999999888776      


Q ss_pred             -CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccC-CCCCCcchHHHHHHHH
Q 029125          121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFG-VANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~-~~~~~~~~Y~~sK~~~  186 (198)
                       ++|+||||||...          .|+..+++|+.+++++++++...  ..++||++||.... .+.++...|+.+|++.
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~  187 (271)
T 3v2g_A          108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAAL  187 (271)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTTCHHHHHHHHHH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCCchHHHHHHHHH
Confidence             7999999999643          23456889999999999998764  35699999984333 3356778999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+.+..
T Consensus       188 ~~l~~~l  194 (271)
T 3v2g_A          188 AGLTKGL  194 (271)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9887754

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.85  E-value=6.5e-21  Score=149.79  Aligned_cols=138  Identities=20%  Similarity=0.185  Sum_probs=108.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      +|+++||||+|+||++++++|+++|++|++++|+..+...     .....++.++.+|++|++++.++++       ++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            4789999999999999999999999999999997543111     0113468899999999999888876       799


Q ss_pred             EEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cC-CCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          124 AVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      +||||||...          .|+..+++|+.+++++++++..    .+ .++||++||...-.+.+....|+.+|++.+.
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  161 (256)
T 1geg_A           82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG  161 (256)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHHH
Confidence            9999998542          1234678999999888877643    34 5799999995433445566789999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       162 ~~~~l  166 (256)
T 1geg_A          162 LTQTA  166 (256)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87754

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.85  E-value=1.1e-20  Score=149.14  Aligned_cols=141  Identities=18%  Similarity=0.045  Sum_probs=112.3

Q ss_pred             CCCCCeEEEEcCCc-hhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-----
Q 029125           53 PPPSEKLLVLGGNG-FVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG-~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      ..++|+++||||+| +||++++++|+++|++|++++|+..+...      .....++.++.+|++|.+++.++++     
T Consensus        19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (266)
T 3o38_A           19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK   98 (266)
T ss_dssp             TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            35678999999987 79999999999999999999998543111      1123578999999999999888765     


Q ss_pred             --CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHHc-----CCCEEEEeeccccCCCCCCcchHHHHH
Q 029125          121 --GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK-----GVKRFVYISAADFGVANYLLQGYYEGK  183 (198)
Q Consensus       121 --~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~-----~~~~~v~~Ss~~~~~~~~~~~~Y~~sK  183 (198)
                        ++|+||||||...          .++..+++|+.+++++++++...     +.++||++||...-.+.++...|+.+|
T Consensus        99 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  178 (266)
T 3o38_A           99 AGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAK  178 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred             hCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHHHH
Confidence              6899999999643          12456789999999999887543     456899999965445566778999999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      ++.+.+++..
T Consensus       179 aa~~~~~~~l  188 (266)
T 3o38_A          179 AGVMALTRCS  188 (266)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999887754

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.85  E-value=5.3e-21  Score=150.06  Aligned_cols=142  Identities=19%  Similarity=0.205  Sum_probs=109.4

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-----
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      ...++|+|+||||+|+||++++++|+++|++|++++++......      .....++.++.+|++|.+++.++++     
T Consensus         9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A            9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             ----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence            34567899999999999999999999999999998854332111      1123578999999999998888775     


Q ss_pred             --CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHH
Q 029125          121 --GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKR  184 (198)
Q Consensus       121 --~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~  184 (198)
                        ++|+||||||...          .++..+++|+.+++++++++    .+.+.++||++||...-.+.++...|+.+|+
T Consensus        89 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  168 (256)
T 3ezl_A           89 VGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKA  168 (256)
T ss_dssp             TCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHHH
Confidence              6899999999643          12456889999998887776    4456789999999654455667789999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.+.+++..
T Consensus       169 a~~~~~~~l  177 (256)
T 3ezl_A          169 GIHGFTMSL  177 (256)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999887654

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.85  E-value=2.5e-21  Score=154.19  Aligned_cols=140  Identities=18%  Similarity=0.257  Sum_probs=110.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCC---CCeEEEEccCCCHHHHHHHhc-----
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWA---NNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~---~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+......     ....   .++.++.+|++|++++.++++     
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (281)
T 3svt_A            9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW   88 (281)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999997543111     0111   268899999999998887765     


Q ss_pred             --CCCEEEEccccCC-----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHH
Q 029125          121 --GVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGK  183 (198)
Q Consensus       121 --~~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK  183 (198)
                        ++|+||||||...           .|+..+++|+.+++++++++..    .+.++||++||...-.+.+....|+.||
T Consensus        89 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  168 (281)
T 3svt_A           89 HGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTK  168 (281)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhHHHHH
Confidence              6899999999622           1245678999999999888744    3455999999954334556678999999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      ++.+.+++..
T Consensus       169 ~a~~~l~~~l  178 (281)
T 3svt_A          169 SAVDHLMQLA  178 (281)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999988754

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.85  E-value=8.3e-21  Score=150.26  Aligned_cols=135  Identities=18%  Similarity=0.065  Sum_probs=108.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEE
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v  125 (198)
                      ..++|+++||||+|+||++++++|+++|++|++++|+.....      ....+.+|++|.+++.++++       ++|+|
T Consensus        25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~------~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~l   98 (266)
T 3uxy_A           25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA------ADLHLPGDLREAAYADGLPGAVAAGLGRLDIV   98 (266)
T ss_dssp             -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC------CSEECCCCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH------hhhccCcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            346789999999999999999999999999999999765421      12445889999988776654       79999


Q ss_pred             EEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 029125          126 ISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       126 i~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      |||||...          .|+..+++|+.+++++++++    ++.+.++||++||...-.+.++...|+.+|++.+.+++
T Consensus        99 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~  178 (266)
T 3uxy_A           99 VNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQ  178 (266)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHHHHHHHHHH
Confidence            99999643          23456789999999999987    45567899999995544556677899999999998877


Q ss_pred             hh
Q 029125          192 TR  193 (198)
Q Consensus       192 ~~  193 (198)
                      ..
T Consensus       179 ~l  180 (266)
T 3uxy_A          179 CM  180 (266)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.85  E-value=5.9e-21  Score=150.60  Aligned_cols=140  Identities=15%  Similarity=0.033  Sum_probs=112.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++++|+||||+|+||.+++++|+++|++|++++|+..+...     .....++.++.+|++|.+++.++++       .
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            457899999999999999999999999999999998643111     1123578999999999999887765       5


Q ss_pred             CCEEEEccccCC-----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          122 VTAVISCVGGFG-----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       122 ~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      +|+||||||...           .+...+++|+.+++++++++.    +.+.++||++||...-.+.++...|+.+|++.
T Consensus       107 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  186 (262)
T 3rkr_A          107 CDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGL  186 (262)
T ss_dssp             CSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHHHHH
Confidence            899999999621           124567899999998888864    35677999999965445566778999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       187 ~~l~~~l  193 (262)
T 3rkr_A          187 NGLMTSA  193 (262)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9887754

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.85  E-value=1.9e-20  Score=149.99  Aligned_cols=141  Identities=13%  Similarity=0.113  Sum_probs=112.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      ..++|+++||||+|+||++++++|+++|++|++++|+......      .....++.++.+|++|++++.++++      
T Consensus        44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  123 (291)
T 3ijr_A           44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL  123 (291)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3467899999999999999999999999999999998643111      1224578999999999998887775      


Q ss_pred             -CCCEEEEccccCC-----------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 -GVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 -~~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                       ++|+||||||...           .|+..+++|+.+++++++++...  ..++||++||...-.+.+....|+.+|++.
T Consensus       124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  203 (291)
T 3ijr_A          124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAI  203 (291)
T ss_dssp             SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCChhHHHHHHHH
Confidence             6899999998542           12456899999999999999764  235999999954334455678899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       204 ~~l~~~l  210 (291)
T 3ijr_A          204 VAFTRSL  210 (291)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9887754

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.85  E-value=6.3e-21  Score=149.57  Aligned_cols=140  Identities=18%  Similarity=0.103  Sum_probs=109.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCe-EEEeecCCCCcc-c---ccC-CCCeEEEEccCCCH-HHHHHHhc------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLT-VASLSRSGRSSL-R---DSW-ANNVIWHQGNLLSS-DSWKEALD------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~-V~~l~r~~~~~~-~---~~~-~~~~~~~~~D~~d~-~~~~~~~~------  120 (198)
                      .++|+++||||+|+||++++++|+++|++ |++++|+..... .   ... ..++.++.+|++|+ +++.++++      
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence            35689999999999999999999999997 999999764211 1   111 24688999999998 77777665      


Q ss_pred             -CCCEEEEccccCC--CCccceehhhHHHHHHHHHHHHc----C---CCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          121 -GVTAVISCVGGFG--SNSYMYKINGTANINAIRAASEK----G---VKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       121 -~~d~vi~~ag~~~--~~~~~~~~n~~~~~~~~~a~~~~----~---~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                       ++|+||||||...  .++..+++|+.++.++++++...    +   .++||++||...-.+.+....|+.+|++.+.++
T Consensus        83 g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  162 (254)
T 1sby_A           83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFT  162 (254)
T ss_dssp             SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHHHHHHHHHHH
Confidence             7999999999643  45678899999999999988542    1   358999999543344566779999999999888


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       163 ~~l  165 (254)
T 1sby_A          163 NSL  165 (254)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.85  E-value=9.9e-21  Score=150.88  Aligned_cols=140  Identities=16%  Similarity=0.080  Sum_probs=110.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+.....+      .....++.++.+|++|.+++.++++       
T Consensus        27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999999997543111      1123568899999999988877664       


Q ss_pred             CCCEEEEccccCCC----------CccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCC-CCcchHHHHHHHHH
Q 029125          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVAN-YLLQGYYEGKRAAE  187 (198)
Q Consensus       121 ~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~-~~~~~Y~~sK~~~e  187 (198)
                      ++|+||||||....          ++..+++|+.+++++++++...  +.++||++||.....+. .+...|+.+|++.+
T Consensus       107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~  186 (283)
T 1g0o_A          107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIE  186 (283)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHHHHH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCCCCcchHHHHHHHH
Confidence            68999999996431          2456899999999999999775  56799999995332233 34778999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       187 ~~~~~l  192 (283)
T 1g0o_A          187 TFARCM  192 (283)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887754

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.85  E-value=4.2e-21  Score=151.98  Aligned_cols=141  Identities=17%  Similarity=0.143  Sum_probs=109.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      +..+|+++||||+|+||++++++|+++|++|++++++......      .....++.++.+|++|.+++.++++      
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3467899999999999999999999999999999865433111      1124578999999999998887775      


Q ss_pred             -CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                       ++|+||||||...          .++..+++|+.+++++++++.    +.+.++||++||...-.+.+....|+.+|++
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  181 (269)
T 3gk3_A          102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAG  181 (269)
T ss_dssp             SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHHH
Confidence             7999999999643          124567899999998888874    3566799999995433445667899999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+++..
T Consensus       182 ~~~~~~~l  189 (269)
T 3gk3_A          182 IHGFTKTL  189 (269)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99887654

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.85  E-value=2.9e-21  Score=153.26  Aligned_cols=139  Identities=19%  Similarity=0.207  Sum_probs=108.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeec-CCCCccc--c----cCCCCeEEEEccCCCH----HHHHHHhc---
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSR-SGRSSLR--D----SWANNVIWHQGNLLSS----DSWKEALD---  120 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r-~~~~~~~--~----~~~~~~~~~~~D~~d~----~~~~~~~~---  120 (198)
                      ++|+++||||+|+||++++++|+++|++|++++| +......  .    ....++.++.+|++|.    +++.++++   
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999 5432110  0    0135688999999999    88887765   


Q ss_pred             ----CCCEEEEccccCC---------------------CCccceehhhHHHHHHHHHHHHc---CC------CEEEEeec
Q 029125          121 ----GVTAVISCVGGFG---------------------SNSYMYKINGTANINAIRAASEK---GV------KRFVYISA  166 (198)
Q Consensus       121 ----~~d~vi~~ag~~~---------------------~~~~~~~~n~~~~~~~~~a~~~~---~~------~~~v~~Ss  166 (198)
                          ++|+||||||...                     .++..+++|+.+++++++++...   +.      ++||++||
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  169 (276)
T 1mxh_A           90 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD  169 (276)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred             HhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECc
Confidence                7899999999532                     12245789999999999998763   33      79999999


Q ss_pred             cccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          167 ADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       167 ~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ...-.+.++...|+.+|++.+.+.+..
T Consensus       170 ~~~~~~~~~~~~Y~asK~a~~~l~~~l  196 (276)
T 1mxh_A          170 AMTDLPLPGFCVYTMAKHALGGLTRAA  196 (276)
T ss_dssp             GGGGSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             hhhcCCCCCCeehHHHHHHHHHHHHHH
Confidence            544345566789999999999887754

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.85  E-value=4.7e-21  Score=149.74  Aligned_cols=139  Identities=14%  Similarity=0.093  Sum_probs=107.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeec-CCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSR-SGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r-~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ++|+++||||+|+||++++++|+++|++|++++| +..+...     .....++.++.+|++|++++.++++       +
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999998 4322110     1113468899999999999888776       7


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|+||||||...          .|+..+++|+.+++++++++.    +.+.++||++||...-.+.+....|+.+|++.+
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  162 (246)
T 2uvd_A           83 VDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVI  162 (246)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHHHH
Confidence            999999999643          134567899999887777663    456789999999532233456678999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+.+..
T Consensus       163 ~~~~~l  168 (246)
T 2uvd_A          163 GLTKTS  168 (246)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            877643

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.85  E-value=5.3e-21  Score=151.65  Aligned_cols=141  Identities=14%  Similarity=0.051  Sum_probs=109.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      ..++++|+||||+|+||++++++|+++|++|++++|+......     .....++.++.+|++|.+++.++++       
T Consensus        28 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  107 (272)
T 1yb1_A           28 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG  107 (272)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            3567899999999999999999999999999999997543111     1113478999999999998887765       


Q ss_pred             CCCEEEEccccCCC----------CccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 ~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      ++|+||||||....          +...+++|+.++.++++++.    +.+.++||++||...-.+.++...|+.+|++.
T Consensus       108 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  187 (272)
T 1yb1_A          108 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAA  187 (272)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHH
T ss_pred             CCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHHHHH
Confidence            68999999996431          23567899999888777763    45678999999954333445567899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      |.+++..
T Consensus       188 ~~l~~~l  194 (272)
T 1yb1_A          188 VGFHKTL  194 (272)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9888754

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.85  E-value=8e-21  Score=143.87  Aligned_cols=124  Identities=16%  Similarity=0.115  Sum_probs=103.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcC---CCEEEEccccCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG---VTAVISCVGGFG  133 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---~d~vi~~ag~~~  133 (198)
                      |+|+||||+|+||++++++|+ +|++|++++|+..            .+.+|++|++++.+++++   +|+||||||...
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~   70 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSAT   70 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCCC
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCCC
Confidence            479999999999999999999 9999999999743            468999999999988875   899999999542


Q ss_pred             C----------CccceehhhHHHHHHHHHHHHc---CCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhhC
Q 029125          134 S----------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       134 ~----------~~~~~~~n~~~~~~~~~a~~~~---~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                      .          +...+++|+.++.++++++.+.   + ++||++||.....+.++...|+.+|.+.|.+++...
T Consensus        71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~~~  143 (202)
T 3d7l_A           71 FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAA  143 (202)
T ss_dssp             CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHT
T ss_pred             CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCCCCccHHHHHHHHHHHHHHHHHH
Confidence            1          1245679999999999999765   3 699999995444455667899999999999988764

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.85  E-value=2.2e-20  Score=153.07  Aligned_cols=141  Identities=12%  Similarity=0.137  Sum_probs=112.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------------ccCCCCeEEEEccCCCHHHHHHHhc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------------DSWANNVIWHQGNLLSSDSWKEALD  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------------~~~~~~~~~~~~D~~d~~~~~~~~~  120 (198)
                      ..++|+++||||+|+||.+++++|+++|++|++++|+..+...            .....++.++.+|++|++++.++++
T Consensus        42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~  121 (346)
T 3kvo_A           42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVE  121 (346)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence            4567899999999999999999999999999999998654211            1123568899999999999888775


Q ss_pred             -------CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccc-cCC-CCCCcc
Q 029125          121 -------GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAAD-FGV-ANYLLQ  177 (198)
Q Consensus       121 -------~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~-~~~-~~~~~~  177 (198)
                             ++|+||||||...          .++..+++|+.+++++++++.    +.+.++||++||.. +.. +.+...
T Consensus       122 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~~~  201 (346)
T 3kvo_A          122 KAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHC  201 (346)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSSSH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCCch
Confidence                   7999999999642          234568999999999999884    44567999999943 222 245678


Q ss_pred             hHHHHHHHHHHHHHhh
Q 029125          178 GYYEGKRAAETELLTR  193 (198)
Q Consensus       178 ~Y~~sK~~~e~~l~~~  193 (198)
                      .|+.+|++.+.+.+..
T Consensus       202 ~Y~aSKaal~~l~~~l  217 (346)
T 3kvo_A          202 AYTIAKYGMSMYVLGM  217 (346)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999887754

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.85  E-value=5.4e-21  Score=148.86  Aligned_cols=137  Identities=12%  Similarity=0.023  Sum_probs=108.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC-------eEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc---
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD---  120 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~-------~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~---  120 (198)
                      +|+|+||||+|+||++++++|+++|+       +|++++|+..+...     .....++.++.+|++|++++.++++   
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999       99999997543111     1113468899999999998888775   


Q ss_pred             ----CCCEEEEccccCCC----------CccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHH
Q 029125          121 ----GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEG  182 (198)
Q Consensus       121 ----~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~s  182 (198)
                          ++|+||||||....          +...+++|+.+++++++++.    +.+.++||++||...-.+.++...|+.+
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  161 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMS  161 (244)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhHHH
Confidence                69999999996431          24467899999998888874    3467899999995443455667899999


Q ss_pred             HHHHHHHHHh
Q 029125          183 KRAAETELLT  192 (198)
Q Consensus       183 K~~~e~~l~~  192 (198)
                      |++.+.+++.
T Consensus       162 K~a~~~~~~~  171 (244)
T 2bd0_A          162 KFGQRGLVET  171 (244)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999988754

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.85  E-value=2.8e-21  Score=152.04  Aligned_cols=140  Identities=19%  Similarity=0.130  Sum_probs=108.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--cc---CC-------CCeEEEEccCCCHHHHHHHhcC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DS---WA-------NNVIWHQGNLLSSDSWKEALDG  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~---~~-------~~~~~~~~D~~d~~~~~~~~~~  121 (198)
                      .++++|+||||+|+||++++++|+++|++|++++|+......  ..   ..       .++.++.+|++|.+++.+++++
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            356899999999999999999999999999999997543111  00   01       4688999999999988887764


Q ss_pred             -------C-CEEEEccccCC----------CCccceehhhHHHHHHHHHHHHc----C-CCEEEEeeccccCCCCCCcch
Q 029125          122 -------V-TAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK----G-VKRFVYISAADFGVANYLLQG  178 (198)
Q Consensus       122 -------~-d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~----~-~~~~v~~Ss~~~~~~~~~~~~  178 (198)
                             + |+||||||...          .++..+++|+.++.++++++.+.    + .++||++||...-.+.++...
T Consensus        85 ~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  164 (264)
T 2pd6_A           85 VQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTN  164 (264)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTBHH
T ss_pred             HHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCChh
Confidence                   4 99999999643          12456789999999999987543    4 569999999532234456789


Q ss_pred             HHHHHHHHHHHHHhh
Q 029125          179 YYEGKRAAETELLTR  193 (198)
Q Consensus       179 Y~~sK~~~e~~l~~~  193 (198)
                      |+.+|++.|.+++..
T Consensus       165 Y~~sK~a~~~~~~~l  179 (264)
T 2pd6_A          165 YAASKAGVIGLTQTA  179 (264)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHH
Confidence            999999999887754

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.85  E-value=4.1e-21  Score=152.78  Aligned_cols=141  Identities=16%  Similarity=0.099  Sum_probs=112.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      ..++|+++||||+|+||++++++|+++|++|++++|+..+...      .....++.++.+|++|++++.++++      
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3567899999999999999999999999999999998543111      1124578999999999998887775      


Q ss_pred             -CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                       ++|+||||||...          .|+..+++|+.+++++++++.    +.+.++||++||.....+.+....|+.+|++
T Consensus       104 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  183 (277)
T 4fc7_A          104 GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAA  183 (277)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHHHH
Confidence             6899999999532          234568999999999999874    3345699999995444455667899999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+.+..
T Consensus       184 ~~~l~~~l  191 (277)
T 4fc7_A          184 VDAMTRHL  191 (277)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99887754

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.85  E-value=5.5e-21  Score=150.25  Aligned_cols=141  Identities=13%  Similarity=0.003  Sum_probs=113.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      ..++|+++||||+++||+++++.|+++|++|++.+|+.+...+     .....++..+.+|++|+++++++++       
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   85 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI   85 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            4678999999999999999999999999999999997543111     1224578899999999999887765       


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHH----H-cCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----E-KGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~-~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                      ++|++|||||...          .|+..+++|+.+++.+.+++.    + .+..+||++||...-.+.+....|+.+|++
T Consensus        86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaa  165 (255)
T 4g81_D           86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGG  165 (255)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHHH
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHHH
Confidence            5899999999542          356678999999998888763    2 345699999996555566677899999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      ...+.+..
T Consensus       166 l~~ltr~l  173 (255)
T 4g81_D          166 IKMLTCSM  173 (255)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99877654

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.85  E-value=1.8e-20  Score=149.09  Aligned_cols=141  Identities=14%  Similarity=0.129  Sum_probs=110.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      ..++|+++||||+|+||++++++|+++|++|++++|+......     .....++.++.+|++|+++++++++       
T Consensus        29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  108 (276)
T 3r1i_A           29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG  108 (276)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3567899999999999999999999999999999997654211     1123578899999999999888876       


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cC-CCEEEEeeccc-c-CCCCCCcchHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAAD-F-GVANYLLQGYYEGK  183 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~-~~~~v~~Ss~~-~-~~~~~~~~~Y~~sK  183 (198)
                      ++|+||||||...          .|+..+++|+.+++++++++..    .+ .++||++||.. + +....+...|+.||
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asK  188 (276)
T 3r1i_A          109 GIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSK  188 (276)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHHHH
Confidence            7999999999643          1244568999999998888743    33 36899999943 2 22334568899999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      ++.+.+.+..
T Consensus       189 aa~~~l~~~l  198 (276)
T 3r1i_A          189 AAVVHLTKAM  198 (276)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999887754

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.85  E-value=3.5e-21  Score=152.13  Aligned_cols=139  Identities=11%  Similarity=0.059  Sum_probs=111.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+...     .....++.++.+|++|++++.++++       +
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999999999997543111     1124578999999999999888775       6


Q ss_pred             CCEEEEccccCC-----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          122 VTAVISCVGGFG-----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       122 ~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      +|+||||||...           .|+..+++|+.+++++++++..    .+ ++||++||.....+.+....|+.+|++.
T Consensus        89 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa~  167 (264)
T 3ucx_A           89 VDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSAL  167 (264)
T ss_dssp             CSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHHHHH
T ss_pred             CcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHHHHH
Confidence            899999998642           1345688999999998888643    33 6999999965455566778999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+.+..
T Consensus       168 ~~~~~~l  174 (264)
T 3ucx_A          168 LAMSQTL  174 (264)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9887754

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.85  E-value=7.9e-21  Score=150.14  Aligned_cols=139  Identities=17%  Similarity=0.086  Sum_probs=110.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++++|+||||+|+||++++++|+++|++|++++|+......      .....++.++.+|++|++++.++++       
T Consensus        19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (274)
T 1ja9_A           19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   98 (274)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999999984322111      1113568899999999999988876       


Q ss_pred             CCCEEEEccccCCC----------CccceehhhHHHHHHHHHHHHc---CCCEEEEeecc-ccCCCCCCcchHHHHHHHH
Q 029125          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK---GVKRFVYISAA-DFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 ~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~~---~~~~~v~~Ss~-~~~~~~~~~~~Y~~sK~~~  186 (198)
                      ++|+||||||....          ++..+++|+.++.++++++.+.   + ++||++||. .+..+.++...|+.+|++.
T Consensus        99 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~  177 (274)
T 1ja9_A           99 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIPNHALYAGSKAAV  177 (274)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSCCSCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCCCCCchHHHHHHHH
Confidence            78999999996431          2456789999999999988664   4 699999994 3424456677899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      |.+++..
T Consensus       178 ~~~~~~~  184 (274)
T 1ja9_A          178 EGFCRAF  184 (274)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9988764

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.85  E-value=3.3e-20  Score=147.71  Aligned_cols=129  Identities=19%  Similarity=0.156  Sum_probs=100.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHC-CCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSN  135 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~  135 (198)
                      |+|+||||||+||++++++|+++ |++|++++|++.+.. .....+++++.+|++|++++.++++++|+|||+++.... 
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~-~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~-   78 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVP-DDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHP-   78 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSC-GGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCS-
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHH-HhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCcc-
Confidence            47999999999999999999998 999999999865532 223468999999999999999999999999999986432 


Q ss_pred             ccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          136 SYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       136 ~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                         ...|+.++.+++++|++.++++|||+||..  ........+...+...|..+++
T Consensus        79 ---~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~--~~~~~~~~~~~~~~~~e~~~~~  130 (289)
T 3e48_A           79 ---SFKRIPEVENLVYAAKQSGVAHIIFIGYYA--DQHNNPFHMSPYFGYASRLLST  130 (289)
T ss_dssp             ---HHHHHHHHHHHHHHHHHTTCCEEEEEEESC--CSTTCCSTTHHHHHHHHHHHHH
T ss_pred             ---chhhHHHHHHHHHHHHHcCCCEEEEEcccC--CCCCCCCccchhHHHHHHHHHH
Confidence               235788999999999999999999999942  2221112223333455665554

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.85  E-value=1.4e-20  Score=149.85  Aligned_cols=141  Identities=13%  Similarity=0.080  Sum_probs=111.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC------------ccc------ccCCCCeEEEEccCCCHHH
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS------------SLR------DSWANNVIWHQGNLLSSDS  114 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~------------~~~------~~~~~~~~~~~~D~~d~~~  114 (198)
                      ..++|+++||||+|+||.+++++|+++|++|++++|+...            ..+      .....++.++.+|++|+++
T Consensus        12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   91 (280)
T 3pgx_A           12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA   91 (280)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            3567899999999999999999999999999999984211            000      1123578899999999999


Q ss_pred             HHHHhc-------CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcC-CCEEEEeeccccCCC
Q 029125          115 WKEALD-------GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKG-VKRFVYISAADFGVA  172 (198)
Q Consensus       115 ~~~~~~-------~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~-~~~~v~~Ss~~~~~~  172 (198)
                      +.++++       ++|+||||||...          .|+..+++|+.+++++++++.    +.+ .++||++||...-.+
T Consensus        92 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  171 (280)
T 3pgx_A           92 LRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA  171 (280)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC
Confidence            888775       6899999999643          234567899999999888873    333 568999999654455


Q ss_pred             CCCcchHHHHHHHHHHHHHhh
Q 029125          173 NYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       173 ~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      .+....|+.+|++.+.+.+..
T Consensus       172 ~~~~~~Y~asKaa~~~~~~~l  192 (280)
T 3pgx_A          172 TPGNGHYSASKHGLTALTNTL  192 (280)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHH
Confidence            667789999999999887754

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.85  E-value=1.5e-20  Score=148.58  Aligned_cols=141  Identities=12%  Similarity=0.092  Sum_probs=111.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccC-CCCeEEEEccCCCHHHHHHHhc-----
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSW-ANNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~-~~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      ..++|+++||||+|+||++++++|+++|++|++++|+..+...      ... ..++.++.+|++|++++.++++     
T Consensus         5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (265)
T 3lf2_A            5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT   84 (265)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999997543111      101 2348999999999998887764     


Q ss_pred             --CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHH
Q 029125          121 --GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKR  184 (198)
Q Consensus       121 --~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~  184 (198)
                        ++|++|||||...          .|+..+++|+.+++++++++..    .+.++||++||.....+.+....|+.+|+
T Consensus        85 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  164 (265)
T 3lf2_A           85 LGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARA  164 (265)
T ss_dssp             HCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHHHHH
Confidence              6899999999642          2345689999999999988843    44568999999655556667789999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.+.+.+..
T Consensus       165 a~~~l~~~l  173 (265)
T 3lf2_A          165 GVKNLVRSM  173 (265)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999887754

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.85  E-value=3.6e-21  Score=152.70  Aligned_cols=140  Identities=14%  Similarity=0.031  Sum_probs=111.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+......     .....++.++.+|++|.+++.++++       +
T Consensus        26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (270)
T 3ftp_A           26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA  105 (270)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999999999997543111     1123467899999999998888776       7


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|+||||||...          .|+..+++|+.+++++++++.    +.+.++||++||...-.+.+....|+.+|++.+
T Consensus       106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  185 (270)
T 3ftp_A          106 LNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVA  185 (270)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHHHHHH
Confidence            899999999543          234568899999999988874    345679999999543344566789999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+.+..
T Consensus       186 ~l~~~l  191 (270)
T 3ftp_A          186 GMTRAL  191 (270)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            877654

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.85  E-value=5.5e-21  Score=151.17  Aligned_cols=140  Identities=14%  Similarity=0.064  Sum_probs=111.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+...      .....++.++.+|++|++++.++++       
T Consensus        18 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   97 (266)
T 4egf_A           18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG   97 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            567899999999999999999999999999999997543111      1124578999999999988887765       


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cC-CCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                      ++|+||||||...          .|+..+++|+.+++++++++..    .+ .++||++||.....+.+....|+.+|++
T Consensus        98 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  177 (266)
T 4egf_A           98 GLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAG  177 (266)
T ss_dssp             SCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHHHHH
Confidence            7999999999643          1345678999999988888743    23 4599999996544556677899999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+.+..
T Consensus       178 ~~~l~~~l  185 (266)
T 4egf_A          178 LVMATKVL  185 (266)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99887754

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.85  E-value=1.1e-20  Score=151.94  Aligned_cols=140  Identities=19%  Similarity=0.077  Sum_probs=112.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ..+++|+||||+|+||.+++++|+++|++|++++|+..+...     .....++.++.+|++|.+++.++++       +
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            467899999999999999999999999999999998643111     1123578999999999999888775       7


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcC-CCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKG-VKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      +|+||||||...          .+...+++|+.+++++++++.    +.+ .++||++||...-.+.+....|+.||++.
T Consensus       109 id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  188 (301)
T 3tjr_A          109 VDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGV  188 (301)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHHHH
Confidence            899999999642          124568899999999998874    334 56999999965445566778999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+.+..
T Consensus       189 ~~~~~~l  195 (301)
T 3tjr_A          189 VGLAETL  195 (301)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9877654

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.85  E-value=7.1e-21  Score=151.29  Aligned_cols=140  Identities=19%  Similarity=0.197  Sum_probs=107.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------cc-CCCCeEEEEccCCCHHHHHHHhc------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DS-WANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~-~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      .++++++||||+|+||++++++|+++|++|++++|+..+...      .. ....+.++.+|++|++++.++++      
T Consensus        30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            457899999999999999999999999999999997543111      00 12357889999999999888775      


Q ss_pred             -CCCEEEEccccCC----------CCccceehhhHHH----HHHHHHHHHcCC--CEEEEeeccc-cC-CCCCCcchHHH
Q 029125          121 -GVTAVISCVGGFG----------SNSYMYKINGTAN----INAIRAASEKGV--KRFVYISAAD-FG-VANYLLQGYYE  181 (198)
Q Consensus       121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~----~~~~~a~~~~~~--~~~v~~Ss~~-~~-~~~~~~~~Y~~  181 (198)
                       ++|+||||||...          .+...+++|+.++    ..+++.+++.+.  ++||++||.. +. .+.++...|+.
T Consensus       110 g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~  189 (279)
T 1xg5_A          110 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSA  189 (279)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchhHH
Confidence             7999999999542          1244678999995    455566666665  7999999943 32 34556678999


Q ss_pred             HHHHHHHHHHhh
Q 029125          182 GKRAAETELLTR  193 (198)
Q Consensus       182 sK~~~e~~l~~~  193 (198)
                      +|++.+.+++..
T Consensus       190 sK~a~~~~~~~l  201 (279)
T 1xg5_A          190 TKYAVTALTEGL  201 (279)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999877653

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.84  E-value=4.8e-21  Score=149.65  Aligned_cols=140  Identities=16%  Similarity=0.209  Sum_probs=108.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--c--cCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D--SWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~--~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      .++++|+||||+|+||++++++|+++|++|++++|+......  .  ....++.++.+|++|++++.++++       ++
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            356899999999999999999999999999999997543111  0  011578999999999998888776       48


Q ss_pred             CEEEEccccCCC----------CccceehhhHHHHHHHHHH----HHcCC-CEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGV-KRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       123 d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~----~~~~~-~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      |+||||||....          +...+++|+.+++++.+++    ++.+. ++||++||...-.+.++...|+.+|++.|
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  163 (251)
T 1zk4_A           84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVR  163 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHHHHH
Confidence            999999995421          2446789999888766665    34555 79999999543344556789999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       164 ~~~~~~  169 (251)
T 1zk4_A          164 IMSKSA  169 (251)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888753

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.84  E-value=8.3e-21  Score=147.75  Aligned_cols=134  Identities=20%  Similarity=0.185  Sum_probs=104.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEEEc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVISC  128 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~  128 (198)
                      +|+++||||+|+||++++++|+++|++|++++|+..+.... .  ++.++.+|++| +++.++++       ++|+||||
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~-~--~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~   77 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQS-L--GAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHA   77 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH-H--TCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHh-h--CcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEEC
Confidence            47899999999999999999999999999999986542111 1  37889999998 76665543       79999999


Q ss_pred             cccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCC--CCcchHHHHHHHHHHHHHh
Q 029125          129 VGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVAN--YLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       129 ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~--~~~~~Y~~sK~~~e~~l~~  192 (198)
                      ||...          .|+..+++|+.+++++++++.    +.+.++||++||...-.+.  ++...|+.+|++.+.+.+.
T Consensus        78 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~  157 (239)
T 2ekp_A           78 AAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRA  157 (239)
T ss_dssp             CCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHHHHHHHH
Confidence            99542          134567899999998888873    4567899999994322223  6678999999999988765


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       158 l  158 (239)
T 2ekp_A          158 L  158 (239)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.84  E-value=2.1e-20  Score=146.24  Aligned_cols=140  Identities=16%  Similarity=0.131  Sum_probs=107.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCe-EEEEccCCCHHHHHHHh------cCCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNV-IWHQGNLLSSDSWKEAL------DGVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~-~~~~~D~~d~~~~~~~~------~~~d~  124 (198)
                      .++++++||||+|+||++++++|+++|++|++++|+..+...  .....++ .++.+|++|.+++.+++      .++|+
T Consensus         9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~   88 (254)
T 2wsb_A            9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI   88 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence            456899999999999999999999999999999997543111  1112345 88999999999888776      47899


Q ss_pred             EEEccccCCC----------CccceehhhHHHHHHHHHH----HHcCCCEEEEeeccc-c-CCCCCCcchHHHHHHHHHH
Q 029125          125 VISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAAD-F-GVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       125 vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~-~-~~~~~~~~~Y~~sK~~~e~  188 (198)
                      ||||||....          ++..+++|+.+++++++++    ++.+.++||++||.. + +.+..+...|+.+|++.|.
T Consensus        89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~  168 (254)
T 2wsb_A           89 LVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQ  168 (254)
T ss_dssp             EEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHHHHHHHHHH
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHHHHHHHHHH
Confidence            9999996431          2345789999988777765    445678999999943 2 2233334899999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       169 ~~~~~  173 (254)
T 2wsb_A          169 LTRAL  173 (254)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88754

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.84  E-value=6.7e-21  Score=151.83  Aligned_cols=140  Identities=14%  Similarity=0.146  Sum_probs=105.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      ..+|+++||||+|+||++++++|+++|++|++++|+.....+      .....++.++.+|++|++++.++++       
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999999975432111      1124578999999999998887776       


Q ss_pred             CCCEEEEccccCC------------CCccceehhhHHHHHHHHHHHHc----C---CCEEEEeeccccCCCCCCcchHHH
Q 029125          121 GVTAVISCVGGFG------------SNSYMYKINGTANINAIRAASEK----G---VKRFVYISAADFGVANYLLQGYYE  181 (198)
Q Consensus       121 ~~d~vi~~ag~~~------------~~~~~~~~n~~~~~~~~~a~~~~----~---~~~~v~~Ss~~~~~~~~~~~~Y~~  181 (198)
                      ++|+||||||...            .|+..+++|+.+++++++++...    +   .++||++||...-.+.+....|+.
T Consensus       107 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  186 (280)
T 4da9_A          107 RIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCM  186 (280)
T ss_dssp             CCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHHHH
T ss_pred             CCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHHHH
Confidence            7999999999621            23456889999999888887432    2   458999999544445566788999


Q ss_pred             HHHHHHHHHHhh
Q 029125          182 GKRAAETELLTR  193 (198)
Q Consensus       182 sK~~~e~~l~~~  193 (198)
                      +|++.+.+.+..
T Consensus       187 sKaa~~~l~~~l  198 (280)
T 4da9_A          187 SKAGLAAFSQGL  198 (280)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999887754

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.84  E-value=9.5e-21  Score=147.84  Aligned_cols=134  Identities=18%  Similarity=0.156  Sum_probs=110.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHH-CCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-----CCCEEEEc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALD-RGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-----GVTAVISC  128 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~-~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~d~vi~~  128 (198)
                      ++|+++||||+|+||++++++|++ .|++|++++|+....     ...+.++.+|++|++++.++++     ++|+||||
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~n   77 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-----AENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLN   77 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-----CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-----cccceEEecCcCCHHHHHHHHHHHHhCCCCEEEEC
Confidence            578999999999999999999999 789999999875422     2467899999999999998876     68999999


Q ss_pred             cccCC----------CCccceehhhHHHHHHHHHHHHcCC--CEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          129 VGGFG----------SNSYMYKINGTANINAIRAASEKGV--KRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       129 ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~~~--~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ||...          .|+..+++|+.+++++++++.....  ++||++||.....+.+....|+.||++.+.+.+..
T Consensus        78 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~~~~l  154 (244)
T 4e4y_A           78 AGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSL  154 (244)
T ss_dssp             CCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             CccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCCchhHHHHHHHHHHHHHH
Confidence            99642          2345689999999999999876432  48999999654455667789999999999888754

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.84  E-value=1.5e-20  Score=146.65  Aligned_cols=141  Identities=17%  Similarity=0.118  Sum_probs=110.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccC--CCHHHHHHHhc----
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNL--LSSDSWKEALD----  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~--~d~~~~~~~~~----  120 (198)
                      ..++|+++||||+|+||++++++|+++|++|++++|+..+...      .....++.++.+|+  +|.+++.++++    
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~   90 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH   90 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999998543111      11124667788887  88888777664    


Q ss_pred             ---CCCEEEEccccCC-----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHH
Q 029125          121 ---GVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEG  182 (198)
Q Consensus       121 ---~~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~s  182 (198)
                         ++|+||||||...           .++..+++|+.+++++++++    ++.+.++||++||.....+.+....|+.+
T Consensus        91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  170 (247)
T 3i1j_A           91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVS  170 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhHHH
Confidence               7899999999642           12456789999999999988    34456799999996555566677899999


Q ss_pred             HHHHHHHHHhh
Q 029125          183 KRAAETELLTR  193 (198)
Q Consensus       183 K~~~e~~l~~~  193 (198)
                      |++.+.+++..
T Consensus       171 K~a~~~~~~~l  181 (247)
T 3i1j_A          171 KFATEGLMQTL  181 (247)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999887754

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.84  E-value=4.9e-21  Score=150.65  Aligned_cols=140  Identities=14%  Similarity=0.094  Sum_probs=112.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+.+....  .....++.++.+|++|++++.++++       ++|+
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            467899999999999999999999999999999997543111  1123578999999999998887664       6899


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      +|||||...          .|+..+++|+.+++++++++...  ..++||++||...-.+.++...|+.+|++.+.+.+.
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~  165 (255)
T 4eso_A           86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASV  165 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTBHHHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCchHHHHHHHHHHHHHHH
Confidence            999999643          23456899999999999999763  235899999965445566778999999999988775


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       166 l  166 (255)
T 4eso_A          166 L  166 (255)
T ss_dssp             H
T ss_pred             H
Confidence            4

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.84  E-value=8.5e-21  Score=150.37  Aligned_cols=141  Identities=16%  Similarity=0.094  Sum_probs=112.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      ..++|+|+||||+|+||++++++|+++|++|++++|+..+..+      .....++.++.+|++|.+++.++++      
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~  105 (271)
T 4iin_A           26 QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSD  105 (271)
T ss_dssp             CCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            3567899999999999999999999999999999996433111      1124578999999999998888775      


Q ss_pred             -CCCEEEEccccCCC----------CccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 -GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 -~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                       ++|+||||||....          +...+++|+.+++++++++.    +.+.++||++||.....+.++...|+.+|++
T Consensus       106 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  185 (271)
T 4iin_A          106 GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGG  185 (271)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHHHHH
Confidence             78999999996432          24567899999998887764    3466799999995433455667899999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+++..
T Consensus       186 ~~~~~~~l  193 (271)
T 4iin_A          186 MIAMSKSF  193 (271)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99887754

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.84  E-value=1.6e-20  Score=153.44  Aligned_cols=128  Identities=23%  Similarity=0.296  Sum_probs=105.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD--GVTAVIS  127 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~  127 (198)
                      +++|+||||||+||++|++.|+++|++|++++|+......      .....+++++.+|+.|.+++.++++  ++|+|||
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~   89 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS   89 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence            5789999999999999999999999999999998632111      1113689999999999999999999  9999999


Q ss_pred             ccccCCCCccceehhhHHHHHHHHHHHHcC-CCEEEEeeccccC----CCCCCcchHHHHHHHHHHHHHhh
Q 029125          128 CVGGFGSNSYMYKINGTANINAIRAASEKG-VKRFVYISAADFG----VANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       128 ~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~-~~~~v~~Ss~~~~----~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      +++.         .|+.++.+++++|++.+ +++||+ |+....    .+..+...|+.+|+.+|+++++.
T Consensus        90 ~a~~---------~n~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~~  150 (346)
T 3i6i_A           90 TVGG---------ESILDQIALVKAMKAVGTIKRFLP-SEFGHDVNRADPVEPGLNMYREKRRVRQLVEES  150 (346)
T ss_dssp             CCCG---------GGGGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTTCCCCTTHHHHHHHHHHHHHHHHHT
T ss_pred             CCch---------hhHHHHHHHHHHHHHcCCceEEee-cccCCCCCccCcCCCcchHHHHHHHHHHHHHHc
Confidence            9987         38889999999999999 999987 442211    12255678999999999999874

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.84  E-value=1.5e-20  Score=147.67  Aligned_cols=139  Identities=12%  Similarity=0.064  Sum_probs=108.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeec-CCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSR-SGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r-~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ++++|+||||+|+||++++++|+++|++|++++| +......     .....++.++.+|++|++++.++++       +
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999999 4322110     0113467899999999998888776       7


Q ss_pred             CCEEEEccccCCC----------CccceehhhHHHHHHHHHHHH----cC-CCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~----~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      +|+||||||....          ++..+++|+.++.++++++..    .+ .++||++||.....+.++...|+.+|++.
T Consensus        86 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  165 (261)
T 1gee_A           86 LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGM  165 (261)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHHHHH
Confidence            9999999996431          234678999999988877643    34 67999999965445566778999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       166 ~~~~~~l  172 (261)
T 1gee_A          166 KLMTETL  172 (261)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9877654

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.84  E-value=7.9e-21  Score=148.35  Aligned_cols=140  Identities=14%  Similarity=0.051  Sum_probs=110.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+......     .....++.++.+|++|++++.++++       +
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA   82 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999999999999999997543111     1123578999999999999888765       5


Q ss_pred             CCEEEEccccCCC----------CccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|+||||||....          +...+++|+.+++++++++..    .+.++||++||.....+.+....|+.+|++.+
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  162 (247)
T 3lyl_A           83 IDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVI  162 (247)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHHHH
Confidence            8999999996531          245678999999988888743    45679999999543345566789999999998


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       163 ~~~~~l  168 (247)
T 3lyl_A          163 GFSKSL  168 (247)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887754

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.84  E-value=3.9e-21  Score=151.12  Aligned_cols=139  Identities=18%  Similarity=0.204  Sum_probs=109.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc------CCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD------GVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d~vi~  127 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+.. .....++.++.+|++|++++.++++      ++|++||
T Consensus         7 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~   85 (257)
T 3tl3_A            7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV-ADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVN   85 (257)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH-HHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEE
T ss_pred             ecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH-HhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence            46789999999999999999999999999999999644322 2234678999999999999888776      7999999


Q ss_pred             ccccCC--------------CCccceehhhHHHHHHHHHHHHc------------CCCEEEEeeccccCCCCCCcchHHH
Q 029125          128 CVGGFG--------------SNSYMYKINGTANINAIRAASEK------------GVKRFVYISAADFGVANYLLQGYYE  181 (198)
Q Consensus       128 ~ag~~~--------------~~~~~~~~n~~~~~~~~~a~~~~------------~~~~~v~~Ss~~~~~~~~~~~~Y~~  181 (198)
                      |||...              .|+..+++|+.+++++++++...            +.++||++||...-.+.+....|+.
T Consensus        86 nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  165 (257)
T 3tl3_A           86 CAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSA  165 (257)
T ss_dssp             CGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHHHHHHH
T ss_pred             CCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCCccHHH
Confidence            999531              23567899999999999988542            3458999999544444556678999


Q ss_pred             HHHHHHHHHHhh
Q 029125          182 GKRAAETELLTR  193 (198)
Q Consensus       182 sK~~~e~~l~~~  193 (198)
                      ||++.+.+.+..
T Consensus       166 sKaa~~~~~~~l  177 (257)
T 3tl3_A          166 SKGGVVGMTLPI  177 (257)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999877654

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.84  E-value=8.5e-21  Score=149.67  Aligned_cols=140  Identities=16%  Similarity=0.094  Sum_probs=109.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+......     .....++.++.+|++|++++.++++       +
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (262)
T 1zem_A            5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   84 (262)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            356899999999999999999999999999999997543111     1113468899999999998877665       7


Q ss_pred             CCEEEEccccC-C----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          122 VTAVISCVGGF-G----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       122 ~d~vi~~ag~~-~----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      +|+||||||.. .          .|+..+++|+.+++++++++..    .+.++||++||...-.+.+....|+.+|++.
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  164 (262)
T 1zem_A           85 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAI  164 (262)
T ss_dssp             CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHHHH
Confidence            89999999864 2          1245678999999988888754    3567999999943333445667899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+.+..
T Consensus       165 ~~~~~~l  171 (262)
T 1zem_A          165 IALTETA  171 (262)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8877654

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=8e-21  Score=150.60  Aligned_cols=140  Identities=14%  Similarity=0.136  Sum_probs=109.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHHHHHHHhc-------CCCEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v  125 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|++..... .....++.++.+|++|++++.++++       ++|+|
T Consensus         7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   86 (270)
T 1yde_A            7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   86 (270)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            457899999999999999999999999999999997543111 1112357899999999999888775       68999


Q ss_pred             EEccccCCC-----------CccceehhhHHHHHHHHHHHH---cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 029125          126 ISCVGGFGS-----------NSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       126 i~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~~---~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      |||||....           |+..+++|+.+++++++++..   .+.++||++||.....+.+....|+.+|++.+.+.+
T Consensus        87 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~  166 (270)
T 1yde_A           87 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTK  166 (270)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCCcccHHHHHHHHHHHH
Confidence            999996431           245678999999999988853   124799999995322334556789999999998887


Q ss_pred             hh
Q 029125          192 TR  193 (198)
Q Consensus       192 ~~  193 (198)
                      ..
T Consensus       167 ~l  168 (270)
T 1yde_A          167 AL  168 (270)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.84  E-value=1.6e-20  Score=149.36  Aligned_cols=140  Identities=16%  Similarity=0.084  Sum_probs=107.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---c-cCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D-SWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---~-~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+...   . ....++.++.+|++|++++.++++       ++
T Consensus        27 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (276)
T 2b4q_A           27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL  106 (276)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            467899999999999999999999999999999997543111   0 011268889999999998887775       68


Q ss_pred             CEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCC----CEEEEeeccccCCCCCCcc-hHHHHH
Q 029125          123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGV----KRFVYISAADFGVANYLLQ-GYYEGK  183 (198)
Q Consensus       123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~----~~~v~~Ss~~~~~~~~~~~-~Y~~sK  183 (198)
                      |+||||||...          .|+..+++|+.+++++++++.    +.+.    ++||++||...-.+.+... .|+.+|
T Consensus       107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y~asK  186 (276)
T 2b4q_A          107 DILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSK  186 (276)
T ss_dssp             SEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccccHHHH
Confidence            99999999542          124567899999988888764    3344    7999999954323334445 899999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      ++.+.+++..
T Consensus       187 ~a~~~~~~~l  196 (276)
T 2b4q_A          187 AALHQLSRML  196 (276)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999888754

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.84  E-value=2.2e-20  Score=147.25  Aligned_cols=141  Identities=13%  Similarity=0.094  Sum_probs=109.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCC---CeEEEeecCCCCccc--c--cCCCCeEEEEccCCCHHHHHHHhc-----
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLR--D--SWANNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g---~~V~~l~r~~~~~~~--~--~~~~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      ..++++|+||||+|+||++++++|+++|   ++|++++|+......  .  ....++.++.+|++|.+++.++++     
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   97 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV   97 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence            4567899999999999999999999999   999999998654211  0  113478999999999998888776     


Q ss_pred             ----CCCEEEEccccCC-----------CCccceehhhHHHHHHHHHHHHc----------C-----CCEEEEeecc-cc
Q 029125          121 ----GVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAASEK----------G-----VKRFVYISAA-DF  169 (198)
Q Consensus       121 ----~~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~~~----------~-----~~~~v~~Ss~-~~  169 (198)
                          ++|+||||||...           .+...+++|+.+++++++++...          +     .++||++||. .+
T Consensus        98 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  177 (267)
T 1sny_A           98 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS  177 (267)
T ss_dssp             HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred             cCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccccc
Confidence                7999999999643           12345789999999998887542          2     4689999994 33


Q ss_pred             CCC--CCCcchHHHHHHHHHHHHHhh
Q 029125          170 GVA--NYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       170 ~~~--~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ...  ..+...|+.+|++.+.+++..
T Consensus       178 ~~~~~~~~~~~Y~~sK~a~~~~~~~l  203 (267)
T 1sny_A          178 IQGNTDGGMYAYRTSKSALNAATKSL  203 (267)
T ss_dssp             STTCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCCchHHHHHHHHHHHHHHHH
Confidence            322  235678999999999888754

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.84  E-value=5.7e-21  Score=149.82  Aligned_cols=130  Identities=12%  Similarity=0.031  Sum_probs=105.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcC----CCEEEEcccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG----VTAVISCVGG  131 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----~d~vi~~ag~  131 (198)
                      ||+|+||||+|+||++++++|+++|++|++++|+..+...       . +.+|++|.+++.+++++    +|+||||||.
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~   72 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------D-LSTAEGRKQAIADVLAKCSKGMDGLVLCAGL   72 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------C-TTSHHHHHHHHHHHHTTCTTCCSEEEECCCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------c-cccCCCCHHHHHHHHHHhCCCCCEEEECCCC
Confidence            5789999999999999999999999999999998654211       1 67899999999988864    5999999996


Q ss_pred             CC---CCccceehhhHHHHHHHHHHH----HcCCCEEEEeecc-ccC---------------------------CCCCCc
Q 029125          132 FG---SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAA-DFG---------------------------VANYLL  176 (198)
Q Consensus       132 ~~---~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~-~~~---------------------------~~~~~~  176 (198)
                      ..   .++..+++|+.+++++++++.    +.+.++||++||. .+.                           .+.++.
T Consensus        73 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (257)
T 1fjh_A           73 GPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGN  152 (257)
T ss_dssp             CTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHH
T ss_pred             CCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCc
Confidence            43   456788999999999888885    4456799999994 331                           223356


Q ss_pred             chHHHHHHHHHHHHHhh
Q 029125          177 QGYYEGKRAAETELLTR  193 (198)
Q Consensus       177 ~~Y~~sK~~~e~~l~~~  193 (198)
                      ..|+.||++.+.+++..
T Consensus       153 ~~Y~~sK~a~~~~~~~l  169 (257)
T 1fjh_A          153 LAYAGSKNALTVAVRKR  169 (257)
T ss_dssp             HHHHHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHHHHH
Confidence            78999999999988754

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.84  E-value=5.8e-21  Score=150.25  Aligned_cols=141  Identities=11%  Similarity=0.065  Sum_probs=111.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      ..++|+++||||+|+||++++++|+++|++|++++|+..+...  .....++.++.+|++|.+++.++++       ++|
T Consensus         6 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   85 (261)
T 3n74_A            6 SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVD   85 (261)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            3467899999999999999999999999999999998644211  1224578999999999998888776       689


Q ss_pred             EEEEccccCCC-----------CccceehhhHHHHHHHHHHHHc----C----CCEEEEeeccccCCCCCCcchHHHHHH
Q 029125          124 AVISCVGGFGS-----------NSYMYKINGTANINAIRAASEK----G----VKRFVYISAADFGVANYLLQGYYEGKR  184 (198)
Q Consensus       124 ~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~~~----~----~~~~v~~Ss~~~~~~~~~~~~Y~~sK~  184 (198)
                      +||||||....           +...+++|+.+++++++++...    +    ..+||++||.....+.+....|+.+|+
T Consensus        86 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKa  165 (261)
T 3n74_A           86 ILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKG  165 (261)
T ss_dssp             EEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHHHH
T ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHHHH
Confidence            99999996431           2345789999999888887432    1    447999999655556667788999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.+.+.+..
T Consensus       166 a~~~~~~~l  174 (261)
T 3n74_A          166 WVVSVTKAL  174 (261)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999887754

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.84  E-value=5.4e-21  Score=150.08  Aligned_cols=139  Identities=17%  Similarity=0.205  Sum_probs=108.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+...  .....++.++.+|++|++++.++++       ++|+
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            356899999999999999999999999999999997543111  1113568899999999998887765       4799


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      ||||||...          .++..+++|+.+++.+.+++    ++.+ ++||++||...-.+.++...|+.+|++.+.++
T Consensus        84 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  162 (253)
T 1hxh_A           84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALT  162 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHHHHHHH
Confidence            999999642          12456789999888766655    4455 79999999544445566789999999999888


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       163 ~~l  165 (253)
T 1hxh_A          163 RAA  165 (253)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.84  E-value=9.7e-21  Score=149.78  Aligned_cols=140  Identities=14%  Similarity=0.163  Sum_probs=111.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccC-CCCeEEEEccCCCHHHHHHHhc---CCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSW-ANNVIWHQGNLLSSDSWKEALD---GVT  123 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~-~~~~~~~~~D~~d~~~~~~~~~---~~d  123 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+......      ... ...+..+.+|++|++++.++++   ++|
T Consensus         8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id   87 (267)
T 3t4x_A            8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD   87 (267)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence            467899999999999999999999999999999998543111      111 2457889999999999888776   789


Q ss_pred             EEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          124 AVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      ++|||||...          .|+..+++|+.+++++.+++    .+.+.++||++||...-.+.+....|+.+|++.+.+
T Consensus        88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l  167 (267)
T 3t4x_A           88 ILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSL  167 (267)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHHHHHHHHH
Confidence            9999999643          23445799999988877766    345667999999965445666778999999999988


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      .+..
T Consensus       168 ~~~l  171 (267)
T 3t4x_A          168 SRSL  171 (267)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8754

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.84  E-value=1.1e-20  Score=150.68  Aligned_cols=140  Identities=19%  Similarity=0.153  Sum_probs=110.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc--cccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+.....  ......++.++.+|++|.+++.++++       ++|+
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            45789999999999999999999999999999999754311  11224578999999999988877765       6899


Q ss_pred             EEEccccCCC---------------CccceehhhHHHHHHHHHHHHc---CCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          125 VISCVGGFGS---------------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       125 vi~~ag~~~~---------------~~~~~~~n~~~~~~~~~a~~~~---~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      +|||||....               |+..+++|+.+++++++++...   ..++||++||.....+.+....|+.||++.
T Consensus        83 lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  162 (281)
T 3zv4_A           83 LIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATKHAV  162 (281)
T ss_dssp             EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSCHHHHHHHHHH
T ss_pred             EEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCCchhHHHHHHH
Confidence            9999996421               2345779999999998887432   236999999965445556678899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+.+..
T Consensus       163 ~~l~~~l  169 (281)
T 3zv4_A          163 VGLVRQM  169 (281)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9887754

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.84  E-value=5.4e-21  Score=149.98  Aligned_cols=140  Identities=12%  Similarity=0.043  Sum_probs=107.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------cc--CCCCeEEEEccCCCHHHHHHHhc-----
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DS--WANNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~--~~~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      .++|+++||||+|+||.+++++|+++|++|++++|+..+...      ..  ...++.++.+|++|.+++.++++     
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999998643111      00  12568899999999998887765     


Q ss_pred             --CCCEEEEccccCC---------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 --GVTAVISCVGGFG---------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 --~~d~vi~~ag~~~---------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                        ++|+||||||...         .|+..+++|+.+++++++++    ++.+.++||++||.....+..+...|+.+|++
T Consensus        85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  164 (250)
T 3nyw_A           85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFA  164 (250)
T ss_dssp             HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHHHHHH
Confidence              6899999999642         13456789999999888887    34566799999995433333447899999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+.+..
T Consensus       165 ~~~l~~~l  172 (250)
T 3nyw_A          165 LLGLAESL  172 (250)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99887754

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.84  E-value=1.8e-20  Score=150.30  Aligned_cols=140  Identities=15%  Similarity=0.066  Sum_probs=111.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc-cc------ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS-LR------DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~-~~------~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+.... .+      .....++.++.+|++|+++++++++      
T Consensus        47 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999998863321 10      1124578899999999998887764      


Q ss_pred             -CCCEEEEccccCC-----------CCccceehhhHHHHHHHHHHHHcCC--CEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 -GVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAASEKGV--KRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 -~~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~~~~~--~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                       ++|+||||||...           .|+..+++|+.+++++++++.....  ++||++||...-.+.+....|+.+|++.
T Consensus       127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~  206 (294)
T 3r3s_A          127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAI  206 (294)
T ss_dssp             TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCchHHHHHHHHH
Confidence             6899999999642           1245689999999999999976543  4999999955444566778999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+.+..
T Consensus       207 ~~l~~~l  213 (294)
T 3r3s_A          207 LNYSRGL  213 (294)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9887754

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.84  E-value=3.5e-20  Score=147.18  Aligned_cols=140  Identities=14%  Similarity=0.125  Sum_probs=110.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------------ccCCCCeEEEEccCCCHHHHHHHhc-
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------------DSWANNVIWHQGNLLSSDSWKEALD-  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------------~~~~~~~~~~~~D~~d~~~~~~~~~-  120 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+...            .....++.++.+|++|++++.++++ 
T Consensus         4 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999998654111            0113568899999999998887765 


Q ss_pred             ------CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCC--CCCcch
Q 029125          121 ------GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVA--NYLLQG  178 (198)
Q Consensus       121 ------~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~--~~~~~~  178 (198)
                            ++|++|||||...          .++..+++|+.+++++++++..    .+.++||++||.....+  .+....
T Consensus        84 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~  163 (274)
T 3e03_A           84 TVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTG  163 (274)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHHCHH
T ss_pred             HHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCCCch
Confidence                  6899999999642          1345678999999998888743    45679999999532222  345678


Q ss_pred             HHHHHHHHHHHHHhh
Q 029125          179 YYEGKRAAETELLTR  193 (198)
Q Consensus       179 Y~~sK~~~e~~l~~~  193 (198)
                      |+.||++.+.+.+..
T Consensus       164 Y~asKaal~~l~~~l  178 (274)
T 3e03_A          164 YTLAKMGMSLVTLGL  178 (274)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999887754

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.84  E-value=1.2e-20  Score=149.87  Aligned_cols=141  Identities=16%  Similarity=0.150  Sum_probs=109.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc-----------cc------ccCCCCeEEEEccCCCHHHH
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS-----------LR------DSWANNVIWHQGNLLSSDSW  115 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~-----------~~------~~~~~~~~~~~~D~~d~~~~  115 (198)
                      ..++|+++||||+|+||.+++++|+++|++|++++|+....           ..      .....++.++.+|++|++++
T Consensus        10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   89 (278)
T 3sx2_A           10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL   89 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            35678999999999999999999999999999999873210           00      11235789999999999998


Q ss_pred             HHHhc-------CCCEEEEccccCC------CCccceehhhHHHHHHHHHHHH----cC-CCEEEEeeccccCCC----C
Q 029125          116 KEALD-------GVTAVISCVGGFG------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVA----N  173 (198)
Q Consensus       116 ~~~~~-------~~d~vi~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~----~~-~~~~v~~Ss~~~~~~----~  173 (198)
                      .++++       ++|+||||||...      .|+..+++|+.+++++++++..    .+ .++||++||...-.+    .
T Consensus        90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  169 (278)
T 3sx2_A           90 SAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSAD  169 (278)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCSS
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccCC
Confidence            88776       7999999999643      2456789999999999988743    33 569999999432222    2


Q ss_pred             CCcchHHHHHHHHHHHHHhh
Q 029125          174 YLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       174 ~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      +....|+.+|++.+.+++..
T Consensus       170 ~~~~~Y~asKaa~~~~~~~l  189 (278)
T 3sx2_A          170 PGSVGYVAAKHGVVGLMRVY  189 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCchHhHHHHHHHHHHHHHH
Confidence            45678999999999887754

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.84  E-value=1.2e-20  Score=148.76  Aligned_cols=140  Identities=14%  Similarity=0.081  Sum_probs=110.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++|+++||||+|+||++++++|+++|++|++++++......      .....++.++.+|++|++++.++++       
T Consensus         6 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (259)
T 3edm_A            6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG   85 (259)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999554332111      1124568999999999999888775       


Q ss_pred             CCCEEEEccccCC-----------CCccceehhhHHHHHHHHHHHHcCC--CEEEEeeccc-cCCCCCCcchHHHHHHHH
Q 029125          121 GVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAASEKGV--KRFVYISAAD-FGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 ~~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~~~~~--~~~v~~Ss~~-~~~~~~~~~~Y~~sK~~~  186 (198)
                      ++|+||||||...           .|+..+++|+.+++++++++.....  ++||++||.. +..+.+....|+.+|++.
T Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~  165 (259)
T 3edm_A           86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAV  165 (259)
T ss_dssp             SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCCcHHHHHHHHHH
Confidence            6899999998541           1245689999999999999976533  4899999943 324556678999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+.+..
T Consensus       166 ~~l~~~l  172 (259)
T 3edm_A          166 MTFTRGL  172 (259)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9888754

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.84  E-value=1.5e-20  Score=149.59  Aligned_cols=139  Identities=14%  Similarity=0.083  Sum_probs=108.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCC---CeEEEEccCCCHHHHHHHhc-----
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWAN---NVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~---~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+...     .....   ++.++.+|++|++++.++++     
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            356899999999999999999999999999999997543111     01112   68899999999998887765     


Q ss_pred             --CCCEEEEccccCCC--------------CccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCC-CCcchH
Q 029125          121 --GVTAVISCVGGFGS--------------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVAN-YLLQGY  179 (198)
Q Consensus       121 --~~d~vi~~ag~~~~--------------~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~-~~~~~Y  179 (198)
                        ++|+||||||....              |+..+++|+.+++++++++..    .+ ++||++||.....+. ++...|
T Consensus        84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y  162 (280)
T 1xkq_A           84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYY  162 (280)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHHH
T ss_pred             cCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcccHH
Confidence              68999999995421              234578999999998888754    34 799999995433333 667899


Q ss_pred             HHHHHHHHHHHHhh
Q 029125          180 YEGKRAAETELLTR  193 (198)
Q Consensus       180 ~~sK~~~e~~l~~~  193 (198)
                      +.+|++.+.+.+..
T Consensus       163 ~asK~a~~~~~~~l  176 (280)
T 1xkq_A          163 AIAKAALDQYTRST  176 (280)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999887754

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.84  E-value=1.2e-20  Score=147.00  Aligned_cols=136  Identities=17%  Similarity=0.122  Sum_probs=109.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc---------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD---------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---------~~d~  124 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+..     ....++.+|++|++++.++++         ++|+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~   79 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   79 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            45789999999999999999999999999999999865422     235778899999998887765         6899


Q ss_pred             EEEccccCC-----------CCccceehhhHHHHHHHHHHHHcC--CCEEEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 029125          125 VISCVGGFG-----------SNSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       125 vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~~~~--~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      ||||||...           .++..+++|+.++.++++++...-  .++||++||...-.+.++...|+.+|++.+.+++
T Consensus        80 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~  159 (241)
T 1dhr_A           80 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQ  159 (241)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHH
T ss_pred             EEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCchHHHHHHHHHHHHHH
Confidence            999999542           123457899999999999986631  2589999995433455667899999999999988


Q ss_pred             hhC
Q 029125          192 TRY  194 (198)
Q Consensus       192 ~~~  194 (198)
                      ...
T Consensus       160 ~la  162 (241)
T 1dhr_A          160 SLA  162 (241)
T ss_dssp             HHT
T ss_pred             HHH
Confidence            764

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.84  E-value=1.4e-20  Score=147.04  Aligned_cols=142  Identities=16%  Similarity=0.076  Sum_probs=114.4

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---ccCCCCeEEEEccCCCHHHHHHHhc--CCCEEE
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD--GVTAVI  126 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi  126 (198)
                      ...++|+++||||+++||+++++.|+++|++|++.+|+..++..   .....++..+.+|++|+++++++++  ++|++|
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLV   84 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILV   84 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEE
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence            35689999999999999999999999999999999997543211   2234578999999999998887765  589999


Q ss_pred             EccccCC----------CCccceehhhHHHHHHHHHHH----HcC-CCEEEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 029125          127 SCVGGFG----------SNSYMYKINGTANINAIRAAS----EKG-VKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       127 ~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      ||||...          +|+..+++|+.+++.+.+++.    +.+ ..+||++||...-.+.+....|+.||++...+.+
T Consensus        85 NNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~ltr  164 (247)
T 4hp8_A           85 NNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTK  164 (247)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHHHHH
Confidence            9999542          356778999999998888753    333 4699999996555556667899999999998776


Q ss_pred             hh
Q 029125          192 TR  193 (198)
Q Consensus       192 ~~  193 (198)
                      ..
T Consensus       165 ~l  166 (247)
T 4hp8_A          165 LL  166 (247)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.84  E-value=9.7e-21  Score=148.27  Aligned_cols=139  Identities=14%  Similarity=0.125  Sum_probs=108.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecC-CCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRS-GRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~-~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ++|+|+||||+|+||++++++|+++|++|++++|+ ......     .....++.++.+|++|++++.++++       +
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG   85 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999998 433111     0113468899999999999988876       7


Q ss_pred             CCEEEEcccc-CC----------CCccceehhhHHHHHHHHHHHH----cC--C---CEEEEeeccc-cCCCCCCcchHH
Q 029125          122 VTAVISCVGG-FG----------SNSYMYKINGTANINAIRAASE----KG--V---KRFVYISAAD-FGVANYLLQGYY  180 (198)
Q Consensus       122 ~d~vi~~ag~-~~----------~~~~~~~~n~~~~~~~~~a~~~----~~--~---~~~v~~Ss~~-~~~~~~~~~~Y~  180 (198)
                      +|+||||||. ..          .+...+++|+.++.++++++..    .+  .   ++||++||.. +..+.++...|+
T Consensus        86 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~  165 (258)
T 3afn_B           86 IDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYG  165 (258)
T ss_dssp             CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCHHHH
T ss_pred             CCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCchHHH
Confidence            9999999996 22          1234678999999988887632    22  2   6899999843 322456678999


Q ss_pred             HHHHHHHHHHHhh
Q 029125          181 EGKRAAETELLTR  193 (198)
Q Consensus       181 ~sK~~~e~~l~~~  193 (198)
                      .+|++.|.+++..
T Consensus       166 ~sK~a~~~~~~~~  178 (258)
T 3afn_B          166 AAKAFLHNVHKNW  178 (258)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988754

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.84  E-value=6.4e-21  Score=148.33  Aligned_cols=138  Identities=17%  Similarity=0.148  Sum_probs=107.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEe-ecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------CC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASL-SRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV  122 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l-~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~  122 (198)
                      +|+|+||||+|+||++++++|+++|++|+++ +|+......     .....++.++.+|++|++++.++++       ++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999995 665432110     0113468899999999999888876       68


Q ss_pred             CEEEEccccCCC----------CccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       123 d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      |+||||||....          ++..+++|+.++.++++++.+    .+.++||++||...-.+.++...|+.+|++.+.
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (244)
T 1edo_A           81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG  160 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHHH
Confidence            999999996431          244678999999998888754    467899999995322334566789999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +++..
T Consensus       161 ~~~~l  165 (244)
T 1edo_A          161 FSKTA  165 (244)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77654

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.84  E-value=1.1e-20  Score=148.12  Aligned_cols=138  Identities=15%  Similarity=0.094  Sum_probs=101.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      ..++|+++||||+|+||.+++++|+++|++|++++|+......     .....++.++.+|++|++++.++++       
T Consensus         6 ~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T 3qiv_A            6 RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFG   85 (253)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3467899999999999999999999999999999997543111     1123568899999999999888776       


Q ss_pred             CCCEEEEccccCC-------------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHH
Q 029125          121 GVTAVISCVGGFG-------------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGK  183 (198)
Q Consensus       121 ~~d~vi~~ag~~~-------------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK  183 (198)
                      ++|+||||||...             .+...+++|+.+++++.+++    .+.+.++||++||...-   .+...|+.+|
T Consensus        86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~asK  162 (253)
T 3qiv_A           86 GIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYGLAK  162 (253)
T ss_dssp             CCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------CCH
T ss_pred             CCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhHHHH
Confidence            7999999998631             12456789999987766665    44567799999994321   3456799999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      ++.+.+++..
T Consensus       163 ~a~~~~~~~l  172 (253)
T 3qiv_A          163 VGINGLTQQL  172 (253)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999887754

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.84  E-value=5.3e-20  Score=147.89  Aligned_cols=131  Identities=21%  Similarity=0.255  Sum_probs=103.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc----cc---ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS----LR---DSWANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~----~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~  128 (198)
                      +++|+||||||+||++++++|+++|++|++++|+....    ..   .....+++++.+|+.|++++.++++++|+|||+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~   83 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   83 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence            57899999999999999999999999999999985431    00   012457899999999999999999999999999


Q ss_pred             cccCCCCccceehhhHHHHHHHHHHHHcC-CCEEEEeeccccCC-----CCCC-cchHHHHHHHHHHHHHhh
Q 029125          129 VGGFGSNSYMYKINGTANINAIRAASEKG-VKRFVYISAADFGV-----ANYL-LQGYYEGKRAAETELLTR  193 (198)
Q Consensus       129 ag~~~~~~~~~~~n~~~~~~~~~a~~~~~-~~~~v~~Ss~~~~~-----~~~~-~~~Y~~sK~~~e~~l~~~  193 (198)
                      ++....     ..|+.++.+++++|++.+ ++|||+ |+.....     +..+ ...| .+|..+|+++++.
T Consensus        84 a~~~~~-----~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~  148 (313)
T 1qyd_A           84 LAGGVL-----SHHILEQLKLVEAIKEAGNIKRFLP-SEFGMDPDIMEHALQPGSITF-IDKRKVRRAIEAA  148 (313)
T ss_dssp             CCCSSS-----STTTTTHHHHHHHHHHSCCCSEEEC-SCCSSCTTSCCCCCSSTTHHH-HHHHHHHHHHHHT
T ss_pred             Cccccc-----hhhHHHHHHHHHHHHhcCCCceEEe-cCCcCCccccccCCCCCcchH-HHHHHHHHHHHhc
Confidence            986532     247788899999999998 999986 4332111     1112 4567 9999999999865

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.84  E-value=2.3e-20  Score=148.34  Aligned_cols=125  Identities=16%  Similarity=0.080  Sum_probs=100.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS  134 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~  134 (198)
                      ++|+|+|||| ||||++++++|+++|++|++++|++.+.. .....+++++.+|+.|.+     ++++|+|||+|+....
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~   76 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQME-AIRASGAEPLLWPGEEPS-----LDGVTHLLISTAPDSG   76 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHH-HHHHTTEEEEESSSSCCC-----CTTCCEEEECCCCBTT
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhh-hHhhCCCeEEEecccccc-----cCCCCEEEECCCcccc
Confidence            4689999998 99999999999999999999999865421 112357899999999854     7899999999997543


Q ss_pred             CccceehhhHHHHHHHHHHHH--cCCCEEEEeec-cccCCC----------CCCcchHHHHHHHHHHHHHhh
Q 029125          135 NSYMYKINGTANINAIRAASE--KGVKRFVYISA-ADFGVA----------NYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       135 ~~~~~~~n~~~~~~~~~a~~~--~~~~~~v~~Ss-~~~~~~----------~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ..       ..+.++++++++  .++++|||+|| .+|+..          ..+.+.|+.+|+++|.+++++
T Consensus        77 ~~-------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~  141 (286)
T 3ius_A           77 GD-------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAV  141 (286)
T ss_dssp             BC-------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHS
T ss_pred             cc-------HHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhh
Confidence            31       234678899988  68899999999 566542          234568999999999999886

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.84  E-value=7.3e-21  Score=148.00  Aligned_cols=138  Identities=16%  Similarity=0.132  Sum_probs=104.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEe-ecCCCCccc-----ccCCCCeEE-EEccCCCHHHHHHHhc-------C
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASL-SRSGRSSLR-----DSWANNVIW-HQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l-~r~~~~~~~-----~~~~~~~~~-~~~D~~d~~~~~~~~~-------~  121 (198)
                      +|+|+||||+|+||++++++|+++|++|+++ +|+..+...     .....++.. +.+|++|.+++.++++       +
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999998 776432111     011235666 8999999998887754       7


Q ss_pred             CCEEEEccccCCC----------CccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      +|+||||||....          +...+++|+.+++++++++    ++.+.++||++||...-.+.++...|+.+|++.+
T Consensus        81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  160 (245)
T 2ph3_A           81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLI  160 (245)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHHH
Confidence            9999999996431          2456789999976666554    4567789999999532223455678999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       161 ~~~~~l  166 (245)
T 2ph3_A          161 GFTRAV  166 (245)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            877654

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.84  E-value=5.3e-20  Score=147.89  Aligned_cols=140  Identities=14%  Similarity=0.080  Sum_probs=111.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc-----------c------cccCCCCeEEEEccCCCHHHHH
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS-----------L------RDSWANNVIWHQGNLLSSDSWK  116 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~-----------~------~~~~~~~~~~~~~D~~d~~~~~  116 (198)
                      .++|+++||||+|+||.+++++|+++|++|++++|+....           .      ......++.++.+|++|.+++.
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            4678999999999999999999999999999999873210           0      0112457899999999999988


Q ss_pred             HHhc-------CCCEEEEccccCCC-----------CccceehhhHHHHHHHHHHHHc-----CCCEEEEeeccccCCCC
Q 029125          117 EALD-------GVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASEK-----GVKRFVYISAADFGVAN  173 (198)
Q Consensus       117 ~~~~-------~~d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~~~-----~~~~~v~~Ss~~~~~~~  173 (198)
                      ++++       ++|+||||||....           |+..+++|+.+++++++++...     +.++||++||...-.+.
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~  185 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA  185 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC
Confidence            8775       69999999995421           2456899999999999887432     35699999996544556


Q ss_pred             CCcchHHHHHHHHHHHHHhh
Q 029125          174 YLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       174 ~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      +....|+.+|++.+.+.+..
T Consensus       186 ~~~~~Y~asKaa~~~l~~~l  205 (299)
T 3t7c_A          186 ENIGNYIASKHGLHGLMRTM  205 (299)
T ss_dssp             TTCHHHHHHHHHHHHHHHHH
T ss_pred             CCcchHHHHHHHHHHHHHHH
Confidence            67789999999999887754

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.84  E-value=5.2e-20  Score=145.34  Aligned_cols=136  Identities=16%  Similarity=0.166  Sum_probs=107.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEE
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v  125 (198)
                      ..++|+++||||+++||+++++.|+++|++|++++|+..+..     ....++.+|++|++++..+++       ++|++
T Consensus         8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDil   82 (261)
T 4h15_A            8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGL-----PEELFVEADLTTKEGCAIVAEATRQRLGGVDVI   82 (261)
T ss_dssp             CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS-----CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEE
T ss_pred             CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCC-----CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            467899999999999999999999999999999999754422     234578999999998877664       58999


Q ss_pred             EEccccCC------------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCC-CCcchHHHHHHHHHH
Q 029125          126 ISCVGGFG------------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVAN-YLLQGYYEGKRAAET  188 (198)
Q Consensus       126 i~~ag~~~------------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~-~~~~~Y~~sK~~~e~  188 (198)
                      |||||...            .|+..+++|+.+++.+.+++    ++.+.++||++||.....+. .....|+.||++.+.
T Consensus        83 VnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~asKaal~~  162 (261)
T 4h15_A           83 VHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALST  162 (261)
T ss_dssp             EECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHHHHHHHH
T ss_pred             EECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHHHHHHHH
Confidence            99998532            23456899999999887776    44566799999995433333 346789999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +.+..
T Consensus       163 lt~~l  167 (261)
T 4h15_A          163 YSKAM  167 (261)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77653

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.84  E-value=1.1e-20  Score=151.60  Aligned_cols=140  Identities=13%  Similarity=0.016  Sum_probs=109.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--c----cCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D----SWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~----~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++++|+||||+|+||++++++|+++|++|++++|+..+...  .    ....++.++.+|++|.+++.++++       
T Consensus        24 l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (302)
T 1w6u_A           24 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  103 (302)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            456899999999999999999999999999999997543111  0    013568999999999998887765       


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH-----cCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE-----KGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~-----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                      ++|+||||||...          .+...+++|+.++.++++++..     .+.++||++||.....+.++...|+.+|++
T Consensus       104 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  183 (302)
T 1w6u_A          104 HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAG  183 (302)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHHHHHH
Confidence            4699999999532          1245678999999988888743     345799999995333345667789999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .|.+++..
T Consensus       184 ~~~~~~~l  191 (302)
T 1w6u_A          184 VEAMSKSL  191 (302)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99988764

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.84  E-value=2.1e-20  Score=150.00  Aligned_cols=141  Identities=18%  Similarity=0.171  Sum_probs=106.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCH-HHHHHHhc-----
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSS-DSWKEALD-----  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~-~~~~~~~~-----  120 (198)
                      +.++++|+||||+|+||.+++++|+++|++|++++|+..+...      .....++.++.+|++|. +.+..+++     
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            3467899999999999999999999999999999998643111      11234789999999997 77766654     


Q ss_pred             --CCCEEEEccccCCC----------------------------------------CccceehhhHHHHHHHHHHH----
Q 029125          121 --GVTAVISCVGGFGS----------------------------------------NSYMYKINGTANINAIRAAS----  154 (198)
Q Consensus       121 --~~d~vi~~ag~~~~----------------------------------------~~~~~~~n~~~~~~~~~a~~----  154 (198)
                        ++|+||||||....                                        ++..+++|+.|++++++++.    
T Consensus        89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~  168 (311)
T 3o26_A           89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ  168 (311)
T ss_dssp             HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence              79999999996521                                        12347899999998888874    


Q ss_pred             HcCCCEEEEeeccc-cCCC------------------------------------------CCCcchHHHHHHHHHHHHH
Q 029125          155 EKGVKRFVYISAAD-FGVA------------------------------------------NYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       155 ~~~~~~~v~~Ss~~-~~~~------------------------------------------~~~~~~Y~~sK~~~e~~l~  191 (198)
                      +.+.++||++||.. +...                                          .++...|+.||++.+.+++
T Consensus       169 ~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~  248 (311)
T 3o26_A          169 LSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR  248 (311)
T ss_dssp             TSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHH
Confidence            34567999999943 2110                                          1344689999999999887


Q ss_pred             hh
Q 029125          192 TR  193 (198)
Q Consensus       192 ~~  193 (198)
                      ..
T Consensus       249 ~l  250 (311)
T 3o26_A          249 VL  250 (311)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.84  E-value=1.2e-20  Score=150.46  Aligned_cols=141  Identities=16%  Similarity=0.089  Sum_probs=109.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      ..++++|+||||+|+||+++++.|+++|++|++++|+..+...     .....++.++.+|++|.+++.++++       
T Consensus        41 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~  120 (285)
T 2c07_A           41 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK  120 (285)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3456899999999999999999999999999998886433111     1113468899999999999888774       


Q ss_pred             CCCEEEEccccCCC----------CccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 ~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      ++|+||||||....          +...+++|+.+++++++++.    +.+.++||++||...-.+.++...|+.+|++.
T Consensus       121 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~  200 (285)
T 2c07_A          121 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGV  200 (285)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHHHHH
Confidence            68999999996431          23567899999888877774    45678999999953223345667899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       201 ~~~~~~l  207 (285)
T 2c07_A          201 IGFTKSL  207 (285)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9887754

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.83  E-value=3.6e-20  Score=145.93  Aligned_cols=141  Identities=12%  Similarity=0.051  Sum_probs=112.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ..++|+++||||+++||+++++.|+++|++|++++|+.+....    .....++.++.+|++|+++++++++       +
T Consensus         4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~   83 (258)
T 4gkb_A            4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGR   83 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            4578999999999999999999999999999999998664211    1224678999999999988877664       6


Q ss_pred             CCEEEEccccCC---------CCccceehhhHHHHHHHHHHHH---cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          122 VTAVISCVGGFG---------SNSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       122 ~d~vi~~ag~~~---------~~~~~~~~n~~~~~~~~~a~~~---~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      +|++|||||...         .|+..+++|+.+++.+.+++..   .+.++||++||...-.+.+....|+.+|++.+.+
T Consensus        84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asKaav~~l  163 (258)
T 4gkb_A           84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSGYCASKGAQLAL  163 (258)
T ss_dssp             CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSCHHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCchHHHHHHHHHHHH
Confidence            899999999532         2456689999999988887743   2236999999965444566778999999999988


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      .+..
T Consensus       164 tr~l  167 (258)
T 4gkb_A          164 TREW  167 (258)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7654

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.83  E-value=1.2e-20  Score=149.72  Aligned_cols=140  Identities=10%  Similarity=0.025  Sum_probs=113.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc--cccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++|+++||||+++||+++++.|+++|++|++++|+.+...  ......++..+.+|++|+++++++++       ++|+
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999999999999999999865421  12234678899999999998887765       5899


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHHHHcC--CCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~~--~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      +|||||...          .|+..+++|+.+++.+.+++...-  .++||++||...-.+.+....|+.+|++...+.+.
T Consensus       107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~Y~asKaav~~ltr~  186 (273)
T 4fgs_A          107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARN  186 (273)
T ss_dssp             EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchHHHHHHHHHHHHHHH
Confidence            999999532          356678999999999999985531  34899999965555666778999999999987775


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       187 l  187 (273)
T 4fgs_A          187 W  187 (273)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.83  E-value=1.2e-20  Score=149.46  Aligned_cols=140  Identities=15%  Similarity=0.192  Sum_probs=109.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++|+++||||+|+||++++++|+++|++|++++++.....+      .....++.++.+|++|++++.++++       
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999998665433111      1124578899999999999888775       


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      ++|++|||||...          .|+..+++|+.+++++++++...  ..++||++||.....+.+....|+.+|++.+.
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  184 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAGVEA  184 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCchHHHHHHHHHHH
Confidence            6899999999643          13456789999999999988654  23589999996544556667899999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +.+..
T Consensus       185 l~~~l  189 (267)
T 3u5t_A          185 MTHVL  189 (267)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88754

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.83  E-value=2.3e-20  Score=147.92  Aligned_cols=141  Identities=17%  Similarity=0.182  Sum_probs=106.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      +.++++|+||||+|+||++++++|+++|++|+++.++.....+      .....++.++.+|++|.+++.++++      
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            3456899999999999999999999999999887443322111      1123578999999999998887765      


Q ss_pred             -CCCEEEEccccCCC-----------CccceehhhHHHHHHHHHHHHc-------CCCEEEEeeccc-cCCCCCCcchHH
Q 029125          121 -GVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASEK-------GVKRFVYISAAD-FGVANYLLQGYY  180 (198)
Q Consensus       121 -~~d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~~~-------~~~~~v~~Ss~~-~~~~~~~~~~Y~  180 (198)
                       ++|+||||||....           +...+++|+.+++++++++...       +.++||++||.. +.........|+
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~  182 (272)
T 4e3z_A          103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYA  182 (272)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHH
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhH
Confidence             68999999996432           2456789999999988887543       356899999943 333333557899


Q ss_pred             HHHHHHHHHHHhh
Q 029125          181 EGKRAAETELLTR  193 (198)
Q Consensus       181 ~sK~~~e~~l~~~  193 (198)
                      .+|++.+.+++..
T Consensus       183 asKaa~~~~~~~l  195 (272)
T 4e3z_A          183 ASKAAIDTFTIGL  195 (272)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999887654

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.83  E-value=1.6e-20  Score=148.30  Aligned_cols=139  Identities=12%  Similarity=0.090  Sum_probs=107.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------cc-CCCCeEEEEccCCCHHHHHHHhc------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DS-WANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~-~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      .++++++||||+|+||++++++|+++|++|++++|+..+...      .. ...++.++.+|++|++++.++++      
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            456899999999999999999999999999999997543110      00 12358899999999998888765      


Q ss_pred             -CCCEEEEccccC--CCCccceehhhHHHHHHHHHH----HHcC---CCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          121 -GVTAVISCVGGF--GSNSYMYKINGTANINAIRAA----SEKG---VKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       121 -~~d~vi~~ag~~--~~~~~~~~~n~~~~~~~~~a~----~~~~---~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                       ++|+||||||..  ..|+..+++|+.+++.+.+++    .+.+   .++||++||.....+.+....|+.+|++.+.++
T Consensus        85 g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  164 (267)
T 2gdz_A           85 GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFT  164 (267)
T ss_dssp             SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHHHHHHHHHH
Confidence             479999999964  356678899999877655554    3332   579999999543344556678999999999888


Q ss_pred             Hh
Q 029125          191 LT  192 (198)
Q Consensus       191 ~~  192 (198)
                      +.
T Consensus       165 ~~  166 (267)
T 2gdz_A          165 RS  166 (267)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.83  E-value=1e-19  Score=141.30  Aligned_cols=130  Identities=17%  Similarity=0.244  Sum_probs=96.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      ..||+|+||||+|+||++++++|+++| ++|++++|++.+.. .....++.++.+|++|++++.++++++|+||||++..
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~   99 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH-KPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGE   99 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSC-SSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCST
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhc-ccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Confidence            347899999999999999999999999 89999999865432 2234589999999999999999999999999999852


Q ss_pred             CCCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCCCC--------cchHHHHHHHHHHHHHh
Q 029125          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVANYL--------LQGYYEGKRAAETELLT  192 (198)
Q Consensus       133 ~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~~~--------~~~Y~~sK~~~e~~l~~  192 (198)
                      .        ....+.++++++++.++++||++|| .+|+.....        ...+...|..+|..+++
T Consensus       100 ~--------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  160 (236)
T 3qvo_A          100 D--------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEA  160 (236)
T ss_dssp             T--------HHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHHHHHHT
T ss_pred             c--------hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHHH
Confidence            2        1134668899999999999999999 445432221        11233445555666654

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.83  E-value=1e-20  Score=155.84  Aligned_cols=112  Identities=15%  Similarity=0.124  Sum_probs=98.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCC--
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG--  133 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~--  133 (198)
                      |+|+|||||||||++|+++|+++|+ +|++++|+                    .|++++.++++++|+|||+||...  
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------~d~~~l~~~~~~~d~Vih~a~~~~~~   60 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------TKEEELESALLKADFIVHLAGVNRPE   60 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------CCHHHHHHHHHHCSEEEECCCSBCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------CCHHHHHHHhccCCEEEECCcCCCCC
Confidence            5899999999999999999999998 88887764                    678899999999999999999654  


Q ss_pred             CCccceehhhHHHHHHHHHHHHcCCC-EEEEeec-cccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          134 SNSYMYKINGTANINAIRAASEKGVK-RFVYISA-ADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       134 ~~~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~Ss-~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      .+...+++|+.++.+++++|++.+++ +|||+|| .+|+     .++|+.+|+++|.+++++
T Consensus        61 ~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~-----~~~Y~~sK~~~E~~~~~~  117 (369)
T 3st7_A           61 HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ-----DNPYGESKLQGEQLLREY  117 (369)
T ss_dssp             CSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS-----CSHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC-----CCCchHHHHHHHHHHHHH
Confidence            45677899999999999999999987 9999999 4454     678999999999999874

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.83  E-value=2e-20  Score=147.83  Aligned_cols=140  Identities=16%  Similarity=0.106  Sum_probs=108.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++|+|+||||+|+||++++++|+++|++|+++.++......      .....++.++.+|++|++++.++++       
T Consensus        24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (267)
T 4iiu_A           24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG  103 (267)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            456899999999999999999999999999887654332111      1124578999999999999888775       


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHH-----HcCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS-----EKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~-----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                      ++|+||||||...          .+...+++|+.++.++++++.     +.+.++||++||...-.+.++...|+.+|++
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  183 (267)
T 4iiu_A          104 AWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAG  183 (267)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHHHH
Confidence            7999999999643          124567899999999988873     4566799999995433445567899999998


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+.+..
T Consensus       184 ~~~~~~~l  191 (267)
T 4iiu_A          184 IIGATKAL  191 (267)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            88776643

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.83  E-value=1.4e-20  Score=150.50  Aligned_cols=139  Identities=16%  Similarity=0.074  Sum_probs=111.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC---eEEEeecCCCCccc------cc-CCCCeEEEEccCCCHHHHHHHhc----
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLR------DS-WANNVIWHQGNLLSSDSWKEALD----  120 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~---~V~~l~r~~~~~~~------~~-~~~~~~~~~~D~~d~~~~~~~~~----  120 (198)
                      ++|+++||||+|+||++++++|+++|+   +|++++|+......      .. ...++.++.+|++|++++.++++    
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999987   99999997543111      00 13468899999999999998876    


Q ss_pred             ---CCCEEEEccccCC-----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHH
Q 029125          121 ---GVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEG  182 (198)
Q Consensus       121 ---~~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~s  182 (198)
                         ++|+||||||...           .|+..+++|+.+++++++++    ++.+.++||++||...-.+.+....|+.+
T Consensus       112 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~as  191 (287)
T 3rku_A          112 EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCAS  191 (287)
T ss_dssp             GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCchHHHH
Confidence               5899999999542           13456899999999999887    44567899999996544556677899999


Q ss_pred             HHHHHHHHHhh
Q 029125          183 KRAAETELLTR  193 (198)
Q Consensus       183 K~~~e~~l~~~  193 (198)
                      |++.+.+.+..
T Consensus       192 Kaa~~~l~~~l  202 (287)
T 3rku_A          192 KFAVGAFTDSL  202 (287)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999887754

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.83  E-value=4.1e-20  Score=144.92  Aligned_cols=134  Identities=16%  Similarity=0.137  Sum_probs=107.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi  126 (198)
                      ..+|+|+||||+|+||++++++|+++|++|++++|+..+..       ...+.+|++|.+++.++++       ++|+||
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li   92 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-------DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFV   92 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-------SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEE
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            34689999999999999999999999999999999865422       2467889999998887765       469999


Q ss_pred             EccccCC-----------CCccceehhhHHHHHHHHHHHHcC--CCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          127 SCVGGFG-----------SNSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       127 ~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~~~~--~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ||||...           .+...+++|+.++.++++++....  .++||++||...-.+.+....|+.+|++.+.+++..
T Consensus        93 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l  172 (251)
T 3orf_A           93 CAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDL  172 (251)
T ss_dssp             ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             ECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCCchhHHHHHHHHHHHHHH
Confidence            9999532           123567899999999999987642  248999999554455667789999999999998876


Q ss_pred             C
Q 029125          194 Y  194 (198)
Q Consensus       194 ~  194 (198)
                      .
T Consensus       173 a  173 (251)
T 3orf_A          173 A  173 (251)
T ss_dssp             T
T ss_pred             H
Confidence            4

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.83  E-value=2.8e-20  Score=147.74  Aligned_cols=137  Identities=15%  Similarity=0.065  Sum_probs=108.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccC--CCCeEEEEccCCCHHHHHHHhcC-------CCEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSW--ANNVIWHQGNLLSSDSWKEALDG-------VTAV  125 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~--~~~~~~~~~D~~d~~~~~~~~~~-------~d~v  125 (198)
                      |+++||||+|+||++++++|+++|++|++++|+..+...  ...  ..++.++.+|++|++++.++++.       +|+|
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            799999999999999999999999999999997543111  001  13688999999999999988864       5999


Q ss_pred             EEccccCCC-----------CccceehhhHHHHHHHHHHH----HcCCC-EEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          126 ISCVGGFGS-----------NSYMYKINGTANINAIRAAS----EKGVK-RFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       126 i~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~----~~~~~-~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      |||||....           ++..+++|+.+++++++++.    +.+.+ +||++||.....+.+....|+.+|++.+.+
T Consensus       102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asKaa~~~l  181 (272)
T 2nwq_A          102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQF  181 (272)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHHHHHHHH
Confidence            999996421           23467899999988777763    45667 999999954444455667899999999998


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      .+..
T Consensus       182 ~~~l  185 (272)
T 2nwq_A          182 SLNL  185 (272)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.83  E-value=3.4e-20  Score=147.88  Aligned_cols=140  Identities=11%  Similarity=-0.018  Sum_probs=109.4

Q ss_pred             CCCCeEEEEcCC--chhHHHHHHHHHHCCCeEEEeecCCCC--cccc--cCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRS--SLRD--SWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGat--G~iG~~l~~~l~~~g~~V~~l~r~~~~--~~~~--~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++|+++||||+  |+||++++++|+++|++|++++|+...  ....  ....++.++.+|++|++++.++++       
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG   98 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            456899999999  999999999999999999999997631  0000  011347889999999998887775       


Q ss_pred             CCCEEEEccccCCC--------------CccceehhhHHHHHHHHHHHHcC---CCEEEEeeccccCCCCCCcchHHHHH
Q 029125          121 GVTAVISCVGGFGS--------------NSYMYKINGTANINAIRAASEKG---VKRFVYISAADFGVANYLLQGYYEGK  183 (198)
Q Consensus       121 ~~d~vi~~ag~~~~--------------~~~~~~~n~~~~~~~~~a~~~~~---~~~~v~~Ss~~~~~~~~~~~~Y~~sK  183 (198)
                      ++|+||||||....              ++..+++|+.+++++++++....   .++||++||.....+.+....|+.+|
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  178 (285)
T 2p91_A           99 SLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMGIAK  178 (285)
T ss_dssp             CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred             CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCccHHHHHH
Confidence            68999999996431              23467899999999999987643   36999999954334455667899999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      ++.+.+++..
T Consensus       179 ~a~~~~~~~l  188 (285)
T 2p91_A          179 AALESTVRYL  188 (285)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999887754

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.83  E-value=2.4e-20  Score=146.66  Aligned_cols=140  Identities=18%  Similarity=0.189  Sum_probs=107.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++|+|+||||+|+||++++++|+++|++|++++|+..+...      .....++.++.+|++|.+++.++++       
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   91 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG   91 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            456899999999999999999999999999999996543211      1113578999999999998887765       


Q ss_pred             CCCEEEEccccCCC----------CccceehhhHHHHHHHHHHHHc----C-CCEEEEeeccc-cCCC------CCCcch
Q 029125          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK----G-VKRFVYISAAD-FGVA------NYLLQG  178 (198)
Q Consensus       121 ~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~~----~-~~~~v~~Ss~~-~~~~------~~~~~~  178 (198)
                      ++|+||||||....          ++..+++|+.+++++++++...    + .++||++||.. +...      ..+...
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~  171 (265)
T 1h5q_A           92 PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVF  171 (265)
T ss_dssp             SEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHH
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccccc
Confidence            48999999996431          2345789999999999887542    3 47999999943 2211      112678


Q ss_pred             HHHHHHHHHHHHHhh
Q 029125          179 YYEGKRAAETELLTR  193 (198)
Q Consensus       179 Y~~sK~~~e~~l~~~  193 (198)
                      |+.+|++.|.+++..
T Consensus       172 Y~~sK~a~~~~~~~l  186 (265)
T 1h5q_A          172 YNSSKAACSNLVKGL  186 (265)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHH
Confidence            999999999888754

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.83  E-value=2.4e-20  Score=148.72  Aligned_cols=140  Identities=15%  Similarity=0.023  Sum_probs=107.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++|+++||||+|+||.+++++|+++|++|++++|+......      ......+.++.+|++|++++.++++       
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  110 (281)
T 4dry_A           31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA  110 (281)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999998543111      0012235899999999998887765       


Q ss_pred             CCCEEEEccccCCC-----------CccceehhhHHHHHHHHHHHH----cC--CCEEEEeeccccCCCCCCcchHHHHH
Q 029125          121 GVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASE----KG--VKRFVYISAADFGVANYLLQGYYEGK  183 (198)
Q Consensus       121 ~~d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~~----~~--~~~~v~~Ss~~~~~~~~~~~~Y~~sK  183 (198)
                      ++|+||||||....           |+..+++|+.+++++++++..    .+  .++||++||.....+.++...|+.+|
T Consensus       111 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK  190 (281)
T 4dry_A          111 RLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATK  190 (281)
T ss_dssp             CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHHHH
Confidence            68999999996421           234678999999888887643    33  46999999965555666778999999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      ++.+.+.+..
T Consensus       191 aa~~~l~~~l  200 (281)
T 4dry_A          191 HAITGLTKST  200 (281)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999887754

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.83  E-value=1e-20  Score=146.86  Aligned_cols=133  Identities=23%  Similarity=0.212  Sum_probs=107.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc---------CCCEEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD---------GVTAVI  126 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---------~~d~vi  126 (198)
                      +|+++||||+|+||++++++|+++|++|++++|++.+..     ....++.+|++|++++.++++         ++|+||
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv   77 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVF   77 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEE
Confidence            578999999999999999999999999999999865422     235778899999988887765         789999


Q ss_pred             EccccCC-----------CCccceehhhHHHHHHHHHHHHcC--CCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          127 SCVGGFG-----------SNSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       127 ~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~~~~--~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ||||...           .++..+++|+.++.++++++...-  .++||++||.....+.++...|+.+|++.+.+++..
T Consensus        78 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l  157 (236)
T 1ooe_A           78 CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSL  157 (236)
T ss_dssp             ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             ECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHH
Confidence            9999532           124457899999999999987642  358999999544445566789999999999988765

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.83  E-value=1e-20  Score=153.41  Aligned_cols=139  Identities=19%  Similarity=0.108  Sum_probs=108.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCC--CCeEEEEccCCCHHHHHHHhc------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWA--NNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~--~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      ..+++|+||||+|+||.+++++|+++|++|++++|+..+...     ....  .++.++.+|++|.+++.++++      
T Consensus         6 l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (319)
T 3ioy_A            6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF   85 (319)
T ss_dssp             CTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence            457899999999999999999999999999999998643111     0011  268999999999998888775      


Q ss_pred             -CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHHc----------CCCEEEEeeccccCCCCCCcchH
Q 029125          121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK----------GVKRFVYISAADFGVANYLLQGY  179 (198)
Q Consensus       121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~----------~~~~~v~~Ss~~~~~~~~~~~~Y  179 (198)
                       ++|+||||||...          .++..+++|+.|++++++++...          +.++||++||...-.+.+....|
T Consensus        86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~~Y  165 (319)
T 3ioy_A           86 GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIY  165 (319)
T ss_dssp             CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSHHH
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCHHH
Confidence             5799999999532          23456899999999988887432          35689999995544455666899


Q ss_pred             HHHHHHHHHHHHh
Q 029125          180 YEGKRAAETELLT  192 (198)
Q Consensus       180 ~~sK~~~e~~l~~  192 (198)
                      +.||++.+.+.+.
T Consensus       166 ~aSKaal~~~~~~  178 (319)
T 3ioy_A          166 NTTKFAVRGLSES  178 (319)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999977766554

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.83  E-value=8.8e-22  Score=149.51  Aligned_cols=133  Identities=17%  Similarity=0.109  Sum_probs=107.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc---CCCEEEEcccc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD---GVTAVISCVGG  131 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~vi~~ag~  131 (198)
                      |+|+||||+|+||++++++|+++  +|++++|++.+...  ... .. .++.+|++|++++.++++   ++|+||||||.
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~-~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~   76 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV-GA-RALPADLADELEAKALLEEAGPLDLLVHAVGK   76 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH-TC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc-cC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence            57999999999999999999998  99999997543111  001 12 888999999999999988   89999999995


Q ss_pred             CC----------CCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          132 FG----------SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       132 ~~----------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ..          .+...+++|+.++.++++++.+.+.++||++||.....+.++...|+.+|++.|.+++..
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~  148 (207)
T 2yut_A           77 AGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAA  148 (207)
T ss_dssp             CCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHHHH
T ss_pred             CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHHHHHH
Confidence            42          123467899999999999997667789999999543345566789999999999988764

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.83  E-value=2.9e-20  Score=152.30  Aligned_cols=133  Identities=18%  Similarity=0.215  Sum_probs=107.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC-----CeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcC---CCEEEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG-----LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDG---VTAVIS  127 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g-----~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---~d~vi~  127 (198)
                      +|+|+||||+||||++++++|+++|     ++|++++|+.....  ....+++++.+|++|.+++.+++++   +|+|||
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih   78 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--HEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFY   78 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--CCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--cccCceEEEEeecCCHHHHHHHHhcCCCCCEEEE
Confidence            3689999999999999999999999     99999999865532  1235789999999999999999998   999999


Q ss_pred             ccccCC-CCccceehhhHHHHHHHHHHHHc--CCCEEE-------Eeec-cccCCCC-------------CCcchHHHHH
Q 029125          128 CVGGFG-SNSYMYKINGTANINAIRAASEK--GVKRFV-------YISA-ADFGVAN-------------YLLQGYYEGK  183 (198)
Q Consensus       128 ~ag~~~-~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v-------~~Ss-~~~~~~~-------------~~~~~Y~~sK  183 (198)
                      +||... ++...+++|+.++.+++++|.+.  ++++||       |+|| .+|+...             +..+.|    
T Consensus        79 ~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y----  154 (364)
T 2v6g_A           79 VTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFY----  154 (364)
T ss_dssp             CCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHH----
T ss_pred             CCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhh----
Confidence            999654 34567899999999999999987  789998       7888 4565421             124467    


Q ss_pred             HHHHHHHHhhC
Q 029125          184 RAAETELLTRY  194 (198)
Q Consensus       184 ~~~e~~l~~~~  194 (198)
                      +.+|.+++++.
T Consensus       155 ~~~E~~~~~~~  165 (364)
T 2v6g_A          155 YDLEDIMLEEV  165 (364)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            34677776653

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.83  E-value=6.6e-20  Score=147.28  Aligned_cols=139  Identities=12%  Similarity=0.075  Sum_probs=109.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCC---CeEEEEccCCCHHHHHHHhc-----
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWAN---NVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~---~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+...     .....   ++.++.+|++|++++.++++     
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999997543111     00122   68899999999998888775     


Q ss_pred             --CCCEEEEccccCCC------------CccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCC-CCcchHHH
Q 029125          121 --GVTAVISCVGGFGS------------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVAN-YLLQGYYE  181 (198)
Q Consensus       121 --~~d~vi~~ag~~~~------------~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~-~~~~~Y~~  181 (198)
                        ++|+||||||....            |+..+++|+.+++++++++..    .+ ++||++||.....+. +....|+.
T Consensus       104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~~~Y~a  182 (297)
T 1xhl_A          104 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYAC  182 (297)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHHHHH
T ss_pred             cCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCcchHHH
Confidence              79999999995321            234678999999988888754    34 799999995433344 56789999


Q ss_pred             HHHHHHHHHHhh
Q 029125          182 GKRAAETELLTR  193 (198)
Q Consensus       182 sK~~~e~~l~~~  193 (198)
                      +|++.+.+.+..
T Consensus       183 sKaa~~~l~~~l  194 (297)
T 1xhl_A          183 AKAALDQYTRCT  194 (297)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999887754

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.83  E-value=4.4e-20  Score=147.28  Aligned_cols=140  Identities=13%  Similarity=0.067  Sum_probs=110.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc---------------c------ccCCCCeEEEEccCCCH
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL---------------R------DSWANNVIWHQGNLLSS  112 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~---------------~------~~~~~~~~~~~~D~~d~  112 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+.....               .      .....++.++.+|++|+
T Consensus         9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A            9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            46789999999999999999999999999999998732100               0      11235789999999999


Q ss_pred             HHHHHHhc-------CCCEEEEccccCCC-----------CccceehhhHHHHHHHHHHHH----cC-CCEEEEeecccc
Q 029125          113 DSWKEALD-------GVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASE----KG-VKRFVYISAADF  169 (198)
Q Consensus       113 ~~~~~~~~-------~~d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~~----~~-~~~~v~~Ss~~~  169 (198)
                      +++.++++       ++|+||||||....           |+..+++|+.+++++++++..    .+ .++||++||...
T Consensus        89 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  168 (286)
T 3uve_A           89 DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGG  168 (286)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhh
Confidence            99888775       79999999995321           244678999999999888743    23 469999999654


Q ss_pred             CCCCCCcchHHHHHHHHHHHHHhh
Q 029125          170 GVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       170 ~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      -.+.+....|+.+|++.+.+.+..
T Consensus       169 ~~~~~~~~~Y~asKaa~~~~~~~l  192 (286)
T 3uve_A          169 LKAYPHTGHYVAAKHGVVGLMRAF  192 (286)
T ss_dssp             TSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCccHHHHHHHHHHHHHHHH
Confidence            455666789999999999887754

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.83  E-value=2.1e-20  Score=146.80  Aligned_cols=137  Identities=15%  Similarity=0.221  Sum_probs=109.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      +|+++||||+|+||++++++|+++|  +.|++++|+......  .....++.++.+|++|.+++.++++       ++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            4789999999999999999999985  788888887543111  1123578999999999999888775       6899


Q ss_pred             EEEccccCCC-----------CccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          125 VISCVGGFGS-----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       125 vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      +|||||....           |+..+++|+.+++++++++    ++.+ ++||++||.....+.++...|+.+|++.+.+
T Consensus        82 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  160 (254)
T 3kzv_A           82 LVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAALNHF  160 (254)
T ss_dssp             EEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHHHHHH
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHHHHHH
Confidence            9999996421           2456889999999998888    4445 7999999965445566778999999999988


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      .+..
T Consensus       161 ~~~l  164 (254)
T 3kzv_A          161 AMTL  164 (254)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8754

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.83  E-value=3.8e-20  Score=147.04  Aligned_cols=140  Identities=15%  Similarity=0.135  Sum_probs=110.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC------------ccc------ccCCCCeEEEEccCCCHHHH
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS------------SLR------DSWANNVIWHQGNLLSSDSW  115 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~------------~~~------~~~~~~~~~~~~D~~d~~~~  115 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+...            ...      .....++.++.+|++|.+++
T Consensus         9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A            9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            467899999999999999999999999999999984221            000      11235789999999999988


Q ss_pred             HHHhc-------CCCEEEEccccCCC----------CccceehhhHHHHHHHHHHH----HcC-CCEEEEeeccccCCCC
Q 029125          116 KEALD-------GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKG-VKRFVYISAADFGVAN  173 (198)
Q Consensus       116 ~~~~~-------~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~----~~~-~~~~v~~Ss~~~~~~~  173 (198)
                      .++++       ++|+||||||....          |+..+++|+.+++++++++.    +.+ .++||++||...-.+.
T Consensus        89 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~  168 (277)
T 3tsc_A           89 RKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQ  168 (277)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCC
Confidence            87765       58999999996432          34568999999998888863    333 4699999996544556


Q ss_pred             CCcchHHHHHHHHHHHHHhh
Q 029125          174 YLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       174 ~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      +....|+.||++.+.+.+..
T Consensus       169 ~~~~~Y~asKaa~~~~~~~l  188 (277)
T 3tsc_A          169 PFMIHYTASKHAVTGLARAF  188 (277)
T ss_dssp             SSCHHHHHHHHHHHHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHHH
Confidence            66789999999999887754

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.83  E-value=7e-21  Score=150.13  Aligned_cols=139  Identities=17%  Similarity=0.058  Sum_probs=107.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHH-CCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           55 PSEKLLVLGGNGFVGSHICREALD-RGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~-~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ++++|+||||+|+||++++++|++ +|++|++++|+..+...     .....++.++.+|++|.+++.++++       +
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            568999999999999999999999 99999999997543111     1113468899999999999888876       7


Q ss_pred             CCEEEEccccCCC----------CccceehhhHHHHHHHHHHHHcC--CCEEEEeecc-ccCC-----------------
Q 029125          122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEKG--VKRFVYISAA-DFGV-----------------  171 (198)
Q Consensus       122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~~~--~~~~v~~Ss~-~~~~-----------------  171 (198)
                      +|+||||||....          ++..+++|+.+++++++++.+..  .++||++||. .+..                 
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  162 (276)
T 1wma_A           83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETI  162 (276)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSC
T ss_pred             CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccccc
Confidence            9999999996421          23457899999999999997653  2499999993 3311                 


Q ss_pred             -----------------------CCCCcchHHHHHHHHHHHHHhh
Q 029125          172 -----------------------ANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       172 -----------------------~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                                             ...+...|+.+|++.|.+++..
T Consensus       163 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l  207 (276)
T 1wma_A          163 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIH  207 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHH
T ss_pred             chhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHH
Confidence                                   0123478999999999887754

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.83  E-value=1.8e-19  Score=146.00  Aligned_cols=141  Identities=14%  Similarity=0.119  Sum_probs=110.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc--------c---------ccCCCCeEEEEccCCCHHHH
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--------R---------DSWANNVIWHQGNLLSSDSW  115 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~--------~---------~~~~~~~~~~~~D~~d~~~~  115 (198)
                      ..++|+++||||+|+||+++++.|+++|++|++++|+.....        .         .....++.++.+|++|++++
T Consensus        43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  122 (317)
T 3oec_A           43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL  122 (317)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            356789999999999999999999999999999988632110        0         11235789999999999998


Q ss_pred             HHHhc-------CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cC-CCEEEEeeccccCCCC
Q 029125          116 KEALD-------GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVAN  173 (198)
Q Consensus       116 ~~~~~-------~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~-~~~~v~~Ss~~~~~~~  173 (198)
                      .++++       ++|+||||||...          .|+..+++|+.+++++++++..    .+ .++||++||...-.+.
T Consensus       123 ~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~  202 (317)
T 3oec_A          123 QAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA  202 (317)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC
Confidence            88775       6899999999643          2345679999999998888743    33 4689999995544555


Q ss_pred             CCcchHHHHHHHHHHHHHhh
Q 029125          174 YLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       174 ~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      +....|+.+|++.+.+.+..
T Consensus       203 ~~~~~Y~asKaa~~~l~~~l  222 (317)
T 3oec_A          203 PGQSHYAASKHGVQGLMLSL  222 (317)
T ss_dssp             TTBHHHHHHHHHHHHHHHHH
T ss_pred             CCCcchHHHHHHHHHHHHHH
Confidence            66789999999999887754

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.83  E-value=5e-20  Score=146.73  Aligned_cols=141  Identities=12%  Similarity=0.078  Sum_probs=109.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc-----------------cccCCCCeEEEEccCCCHHHH
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-----------------RDSWANNVIWHQGNLLSSDSW  115 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~-----------------~~~~~~~~~~~~~D~~d~~~~  115 (198)
                      ..++|+++||||+|+||++++++|+++|++|++++|+.....                 ......++.++.+|++|++++
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   86 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV   86 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence            356789999999999999999999999999999998732110                 011235789999999999998


Q ss_pred             HHHhc-------CCCEEEEccccCC--------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccc-cCC------
Q 029125          116 KEALD-------GVTAVISCVGGFG--------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAAD-FGV------  171 (198)
Q Consensus       116 ~~~~~-------~~d~vi~~ag~~~--------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~-~~~------  171 (198)
                      .++++       ++|+||||||...        .|+..+++|+.+++++++++...  ..++||++||.. +..      
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  166 (287)
T 3pxx_A           87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPG  166 (287)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccccc
Confidence            87775       7999999999643        23456899999999999999765  345999999942 211      


Q ss_pred             ----CCCCcchHHHHHHHHHHHHHhh
Q 029125          172 ----ANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       172 ----~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                          +.++...|+.+|++.+.+.+..
T Consensus       167 ~~~~~~~~~~~Y~asK~a~~~~~~~l  192 (287)
T 3pxx_A          167 AGGPQGPGGAGYSYAKQLVDSYTLQL  192 (287)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCCccchHHHHHHHHHHHHHHH
Confidence                1144568999999999887754

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.83  E-value=2e-20  Score=147.79  Aligned_cols=139  Identities=16%  Similarity=0.101  Sum_probs=109.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..+...  .....++.++.+|++|++++.++++       ++|+
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   83 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   83 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            356899999999999999999999999999999998543111  1122568899999999998887765       5799


Q ss_pred             EEEccccCCC----------CccceehhhHHHHHHHHHHHHcC--CCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          125 VISCVGGFGS----------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       125 vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~~~--~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      ||||||....          ++..+++|+.+++++++++....  .++||++||...- +.+....|+.+|++.+.+.+.
T Consensus        84 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~Y~asK~a~~~~~~~  162 (263)
T 2a4k_A           84 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLART  162 (263)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHHHHHHHHCSSHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCCcHHHHHHHHHHHHHHHH
Confidence            9999996431          24567899999999999987643  4599999994322 445567899999998887765


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       163 l  163 (263)
T 2a4k_A          163 L  163 (263)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.83  E-value=3.3e-20  Score=150.93  Aligned_cols=138  Identities=14%  Similarity=0.042  Sum_probs=109.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--c---------cCCCCeEEEEccCCCHHHHHHHhcC---
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D---------SWANNVIWHQGNLLSSDSWKEALDG---  121 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~---------~~~~~~~~~~~D~~d~~~~~~~~~~---  121 (198)
                      +++|+||||+|+||++++++|+++|++|+++.|+......  .         ....++.++.+|++|.+++.++++.   
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            5789999999999999999999999999888876433111  0         0125689999999999999998874   


Q ss_pred             --CCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          122 --VTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       122 --~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                        +|+||||||...          .++..+++|+.+++++++++    ++.+.++||++||...-.+.+....|+.||++
T Consensus        82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~aSK~a  161 (327)
T 1jtv_A           82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFA  161 (327)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHHHHHH
Confidence              899999998532          13456889999999999886    44567899999995433444566789999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+++..
T Consensus       162 ~~~~~~~l  169 (327)
T 1jtv_A          162 LEGLCESL  169 (327)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99887754

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.82  E-value=1.1e-19  Score=145.96  Aligned_cols=140  Identities=12%  Similarity=-0.054  Sum_probs=111.1

Q ss_pred             CCCCeEEEEcCCc--hhHHHHHHHHHHCCCeEEEeecCCCCccc----ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG--~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++|+++||||+|  +||++++++|+++|++|++++|+......    ......+.++.+|++|++++.++++       
T Consensus        28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (296)
T 3k31_A           28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG  107 (296)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999997  99999999999999999999998532111    0112356899999999999888775       


Q ss_pred             CCCEEEEccccCC--------------CCccceehhhHHHHHHHHHHHHcC--CCEEEEeeccccCCCCCCcchHHHHHH
Q 029125          121 GVTAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKR  184 (198)
Q Consensus       121 ~~d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~a~~~~~--~~~~v~~Ss~~~~~~~~~~~~Y~~sK~  184 (198)
                      ++|+||||||...              .|...+++|+.+++++++++...-  .++||++||.....+.+....|+.||+
T Consensus       108 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~~~Y~asKa  187 (296)
T 3k31_A          108 SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHYNVMGVCKA  187 (296)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTTHHHHHHH
T ss_pred             CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCchhhHHHHH
Confidence            6899999999642              134567899999999999997643  349999999654455566789999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.+.+.+..
T Consensus       188 al~~l~~~l  196 (296)
T 3k31_A          188 ALEASVKYL  196 (296)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999887754

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.82  E-value=2.4e-20  Score=146.95  Aligned_cols=140  Identities=12%  Similarity=0.051  Sum_probs=109.1

Q ss_pred             CCCCeEEEEcCC--chhHHHHHHHHHHCCCeEEEeecCCCC--cccc--cCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRS--SLRD--SWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGat--G~iG~~l~~~l~~~g~~V~~l~r~~~~--~~~~--~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++|+++||||+  |+||++++++|+++|++|++++|+...  ....  .....+.++.+|++|++++.++++       
T Consensus         6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (261)
T 2wyu_A            6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (261)
T ss_dssp             CTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            356899999999  999999999999999999999997531  0000  011347899999999999888776       


Q ss_pred             CCCEEEEccccCCC--------------CccceehhhHHHHHHHHHHHHcC--CCEEEEeeccccCCCCCCcchHHHHHH
Q 029125          121 GVTAVISCVGGFGS--------------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKR  184 (198)
Q Consensus       121 ~~d~vi~~ag~~~~--------------~~~~~~~n~~~~~~~~~a~~~~~--~~~~v~~Ss~~~~~~~~~~~~Y~~sK~  184 (198)
                      ++|+||||||....              ++..+++|+.+++++++++...-  .++||++||.....+.++...|+.+|+
T Consensus        86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  165 (261)
T 2wyu_A           86 GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKA  165 (261)
T ss_dssp             SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCchHHHHHHH
Confidence            68999999996431              23467899999999999997642  258999999543344556678999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.+.+++..
T Consensus       166 a~~~~~~~l  174 (261)
T 2wyu_A          166 ALEASVRYL  174 (261)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999887754

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.82  E-value=1.9e-20  Score=151.94  Aligned_cols=141  Identities=13%  Similarity=0.074  Sum_probs=109.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC----------CCccc-----ccCCCCeEEEEccCCCHHHHHH
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG----------RSSLR-----DSWANNVIWHQGNLLSSDSWKE  117 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~----------~~~~~-----~~~~~~~~~~~~D~~d~~~~~~  117 (198)
                      ..++|+++||||+|+||++++++|+++|++|++++|+.          .....     .....++.++.+|++|.+++.+
T Consensus        24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG  103 (322)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            34678999999999999999999999999999999862          11000     1123468899999999999888


Q ss_pred             Hhc-------CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHHcC----------CCEEEEeeccccC
Q 029125          118 ALD-------GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEKG----------VKRFVYISAADFG  170 (198)
Q Consensus       118 ~~~-------~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~~----------~~~~v~~Ss~~~~  170 (198)
                      +++       ++|+||||||...          .++..+++|+.+++++++++....          .++||++||...-
T Consensus       104 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~  183 (322)
T 3qlj_A          104 LIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGL  183 (322)
T ss_dssp             HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHc
Confidence            776       7899999999643          234568999999999988874321          1599999995433


Q ss_pred             CCCCCcchHHHHHHHHHHHHHhh
Q 029125          171 VANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       171 ~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      .+.+....|+.||++.+.+++..
T Consensus       184 ~~~~~~~~Y~asKaal~~l~~~l  206 (322)
T 3qlj_A          184 QGSVGQGNYSAAKAGIATLTLVG  206 (322)
T ss_dssp             HCBTTCHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCccHHHHHHHHHHHHHHH
Confidence            44556778999999999887754

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.82  E-value=1.7e-19  Score=142.35  Aligned_cols=140  Identities=10%  Similarity=0.037  Sum_probs=110.2

Q ss_pred             CCCCeEEEEcCCch--hHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCC-CCeEEEEccCCCHHHHHHHhc-----
Q 029125           54 PPSEKLLVLGGNGF--VGSHICREALDRGLTVASLSRSGRSSLR-----DSWA-NNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~--iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~-~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      .++|+++||||+|+  ||.+++++|+++|++|++++|+......     .... .++.++.+|++|+++++++++     
T Consensus         5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            46789999999977  9999999999999999999987532110     1112 368999999999998887765     


Q ss_pred             --CCCEEEEccccCC--------------CCccceehhhHHHHHHHHHHHHcC--CCEEEEeeccccCCCCCCcchHHHH
Q 029125          121 --GVTAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEG  182 (198)
Q Consensus       121 --~~d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~a~~~~~--~~~~v~~Ss~~~~~~~~~~~~Y~~s  182 (198)
                        ++|+||||||...              .+...+++|+.++.++++++...-  .++||++||.....+.+....|+.+
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  164 (266)
T 3oig_A           85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNYNVMGVA  164 (266)
T ss_dssp             HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTHHHHHH
T ss_pred             hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCcchhHHH
Confidence              6899999999643              123457899999999999997653  3489999996544556667899999


Q ss_pred             HHHHHHHHHhh
Q 029125          183 KRAAETELLTR  193 (198)
Q Consensus       183 K~~~e~~l~~~  193 (198)
                      |++.+.+.+..
T Consensus       165 Kaa~~~~~~~l  175 (266)
T 3oig_A          165 KASLDASVKYL  175 (266)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999887754

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.82  E-value=7.2e-20  Score=146.79  Aligned_cols=141  Identities=11%  Similarity=-0.010  Sum_probs=111.0

Q ss_pred             CCCCCeEEEEcCCch--hHHHHHHHHHHCCCeEEEeecCCCCcc--c--ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           53 PPPSEKLLVLGGNGF--VGSHICREALDRGLTVASLSRSGRSSL--R--DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~--iG~~l~~~l~~~g~~V~~l~r~~~~~~--~--~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      ..++|+++||||+|+  ||++++++|+++|++|++++|+.....  .  .....++.++.+|++|.+++.++++      
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW  107 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            356789999999977  999999999999999999998742110  0  0112468899999999999888775      


Q ss_pred             -CCCEEEEccccCC--------------CCccceehhhHHHHHHHHHHHHcC--CCEEEEeeccccCCCCCCcchHHHHH
Q 029125          121 -GVTAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGK  183 (198)
Q Consensus       121 -~~d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~a~~~~~--~~~~v~~Ss~~~~~~~~~~~~Y~~sK  183 (198)
                       ++|+||||||...              .|...+++|+.+++++++++...-  .++||++||.....+.+....|+.||
T Consensus       108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asK  187 (293)
T 3grk_A          108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVMGVAK  187 (293)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred             CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCchHHHHHHH
Confidence             6899999999643              124567899999999999987642  35999999965444556678999999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      ++.+.+.+..
T Consensus       188 aa~~~l~~~l  197 (293)
T 3grk_A          188 AALEASVKYL  197 (293)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999887754

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.82  E-value=1.6e-20  Score=148.26  Aligned_cols=141  Identities=15%  Similarity=0.140  Sum_probs=105.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc--cc------ccCCCCeEEEEccCCCHHHHHHHhc----
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS--LR------DSWANNVIWHQGNLLSSDSWKEALD----  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~--~~------~~~~~~~~~~~~D~~d~~~~~~~~~----  120 (198)
                      ..++|+++||||+|+||++++++|+++|++|++++|.....  ..      .....++.++.+|++|++++.++++    
T Consensus         8 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   87 (262)
T 3ksu_A            8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEK   87 (262)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999998754321  00      1123568899999999999888775    


Q ss_pred             ---CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 ---GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 ---~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                         ++|++|||||...          .|+..+++|+.+++++++++...  +.++||++||.....+.+....|+.+|++
T Consensus        88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  167 (262)
T 3ksu_A           88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKAP  167 (262)
T ss_dssp             HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCCCC-----CH
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCCchhHHHHHH
Confidence               6899999999542          23456789999999999999764  34689999995433344556789999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+.+..
T Consensus       168 ~~~l~~~l  175 (262)
T 3ksu_A          168 VEHYTRAA  175 (262)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99887754

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.82  E-value=1.2e-19  Score=142.07  Aligned_cols=138  Identities=18%  Similarity=0.058  Sum_probs=102.4

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCC-CHHHHHHHhcCCCEEEEccc
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLL-SSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~-d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ...++|+|+||||+|+||++++++|+++|++|++++|+.... .. . ..+.++ +|+. +.+.+.+.+.++|+||||||
T Consensus        15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~-~~-~-~~~~~~-~D~~~~~~~~~~~~~~iD~lv~~Ag   90 (249)
T 1o5i_A           15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL-KR-S-GHRYVV-CDLRKDLDLLFEKVKEVDILVLNAG   90 (249)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HH-T-CSEEEE-CCTTTCHHHHHHHSCCCSEEEECCC
T ss_pred             hccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH-Hh-h-CCeEEE-eeHHHHHHHHHHHhcCCCEEEECCC
Confidence            445788999999999999999999999999999999975221 11 1 356677 9993 23334444448999999999


Q ss_pred             cCCC----------CccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          131 GFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       131 ~~~~----------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ....          ++..+++|+.+++++.+++    ++.+.++||++||...-.+.++...|+.+|++.+.+.+..
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l  167 (249)
T 1o5i_A           91 GPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTL  167 (249)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHHHHHHHHHHHH
Confidence            5431          2456789999988665554    5567789999999543344566789999999999877653

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.82  E-value=5.7e-20  Score=145.91  Aligned_cols=140  Identities=12%  Similarity=-0.003  Sum_probs=109.5

Q ss_pred             CCCCeEEEEcCC--chhHHHHHHHHHHCCCeEEEeecCCCCc--ccc--cCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSS--LRD--SWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGat--G~iG~~l~~~l~~~g~~V~~l~r~~~~~--~~~--~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++|+++||||+  |+||++++++|+++|++|++++|+....  ...  ....++.++.+|++|++++.++++       
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   83 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            356899999999  9999999999999999999999986410  000  011347899999999998887765       


Q ss_pred             CCCEEEEccccCCC--------------CccceehhhHHHHHHHHHHHHcC--CCEEEEeeccccCCCCCCcchHHHHHH
Q 029125          121 GVTAVISCVGGFGS--------------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKR  184 (198)
Q Consensus       121 ~~d~vi~~ag~~~~--------------~~~~~~~n~~~~~~~~~a~~~~~--~~~~v~~Ss~~~~~~~~~~~~Y~~sK~  184 (198)
                      ++|+||||||....              ++..+++|+.+++++++++...-  .++||++||.....+.++...|+.+|+
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  163 (275)
T 2pd4_A           84 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKA  163 (275)
T ss_dssp             CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHHH
T ss_pred             CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCchhhHHHHH
Confidence            68999999996431              23467899999999999997651  259999999544444556778999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.+.+.+..
T Consensus       164 a~~~~~~~l  172 (275)
T 2pd4_A          164 ALESAVRYL  172 (275)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999887754

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.82  E-value=7.2e-20  Score=146.95  Aligned_cols=139  Identities=17%  Similarity=0.077  Sum_probs=109.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------c----cCCCCeEEEEccCCCHHHHHHHhc---
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------D----SWANNVIWHQGNLLSSDSWKEALD---  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~----~~~~~~~~~~~D~~d~~~~~~~~~---  120 (198)
                      .++++|+||||+|+||++++++|+++|++|++++|+......      .    ....++.++.+|++|.+++.++++   
T Consensus        16 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   95 (303)
T 1yxm_A           16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   95 (303)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999997543110      0    123578999999999999888776   


Q ss_pred             ----CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHH
Q 029125          121 ----GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEG  182 (198)
Q Consensus       121 ----~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~s  182 (198)
                          ++|+||||||...          .+...+++|+.++.++++++..    .+.++||++||.. ..+.+....|+.+
T Consensus        96 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~Y~~s  174 (303)
T 1yxm_A           96 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVHSGAA  174 (303)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHHHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcchhhHHH
Confidence                4899999999532          1244578999999999999754    2356899999965 3344566789999


Q ss_pred             HHHHHHHHHhh
Q 029125          183 KRAAETELLTR  193 (198)
Q Consensus       183 K~~~e~~l~~~  193 (198)
                      |.+.+.+.+..
T Consensus       175 K~a~~~~~~~l  185 (303)
T 1yxm_A          175 RAGVYNLTKSL  185 (303)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999877654

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.82  E-value=5.9e-20  Score=146.53  Aligned_cols=140  Identities=16%  Similarity=0.107  Sum_probs=108.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      ..+++|+||||+|+||.+++++|+++|++|++++|+..+...      .....++.++.+|++|.+++.++++       
T Consensus        26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  105 (286)
T 1xu9_A           26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG  105 (286)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999999999997543111      0012368899999999988887765       


Q ss_pred             CCCEEEEc-cccCCC---------CccceehhhHHHHHHHHHHHHc---CCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          121 GVTAVISC-VGGFGS---------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       121 ~~d~vi~~-ag~~~~---------~~~~~~~n~~~~~~~~~a~~~~---~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      ++|+|||| +|....         +...+++|+.++.++++++...   +.++||++||.....+.++...|+.+|++.+
T Consensus       106 ~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  185 (286)
T 1xu9_A          106 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALD  185 (286)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCCccHHHHHHHHHH
Confidence            79999999 564321         1345789999999988887442   3469999999544445566789999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++..
T Consensus       186 ~~~~~l  191 (286)
T 1xu9_A          186 GFFSSI  191 (286)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887653

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.82  E-value=1.1e-19  Score=145.69  Aligned_cols=127  Identities=28%  Similarity=0.352  Sum_probs=100.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc--cc------ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS--LR------DSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~--~~------~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      +++|+||||||+||+++++.|+++|++|++++|+....  ..      .....+++++.+|++|++++.++++++|+|||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~   83 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   83 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence            67899999999999999999999999999999985432  00      11245789999999999999999999999999


Q ss_pred             ccccCCCCccceehhhHHHHHHHHHHHHcC-CCEEEEeeccccC----CCCCC-cchHHHHHHHHHHHHHhh
Q 029125          128 CVGGFGSNSYMYKINGTANINAIRAASEKG-VKRFVYISAADFG----VANYL-LQGYYEGKRAAETELLTR  193 (198)
Q Consensus       128 ~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~-~~~~v~~Ss~~~~----~~~~~-~~~Y~~sK~~~e~~l~~~  193 (198)
                      +++...         +.++.+++++|++.+ +++||+ |+....    .+..+ ...| .+|..+|.++++.
T Consensus        84 ~a~~~~---------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~  144 (308)
T 1qyc_A           84 TVGSLQ---------IESQVNIIKAIKEVGTVKRFFP-SEFGNDVDNVHAVEPAKSVF-EVKAKVRRAIEAE  144 (308)
T ss_dssp             CCCGGG---------SGGGHHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHHH
T ss_pred             CCcchh---------hhhHHHHHHHHHhcCCCceEee-cccccCccccccCCcchhHH-HHHHHHHHHHHhc
Confidence            998632         456789999999998 999984 443211    11122 3467 9999999999865

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.82  E-value=7.2e-20  Score=143.36  Aligned_cols=141  Identities=20%  Similarity=0.125  Sum_probs=109.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhcC-----
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALDG-----  121 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~~-----  121 (198)
                      +.++|+++||||+|+||++++++|+++|++|+++.++......      .....++.++.+|++|.++++.+++.     
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            3567899999999999999999999999999987554332111      11235688999999999888776642     


Q ss_pred             --------CCEEEEccccCCC----------CccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHH
Q 029125          122 --------VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYE  181 (198)
Q Consensus       122 --------~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~  181 (198)
                              +|+||||||....          ++..+++|+.+++++++++...  +.++||++||.....+.+....|+.
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~a  163 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSM  163 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCcchhHH
Confidence                    8999999996421          2345789999999999998764  3458999999654455666789999


Q ss_pred             HHHHHHHHHHhh
Q 029125          182 GKRAAETELLTR  193 (198)
Q Consensus       182 sK~~~e~~l~~~  193 (198)
                      +|++.+.+.+..
T Consensus       164 sKaa~~~~~~~l  175 (255)
T 3icc_A          164 TKGAINTMTFTL  175 (255)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHH
Confidence            999999887654

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.82  E-value=1.1e-19  Score=143.42  Aligned_cols=140  Identities=14%  Similarity=0.124  Sum_probs=111.0

Q ss_pred             CCCCeEEEEcCC--chhHHHHHHHHHHCCCeEEEeecCCCCccc-------ccCCCCeEEEEccCCCHHHHHHHhc----
Q 029125           54 PPSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD----  120 (198)
Q Consensus        54 ~~~~~vlvtGat--G~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-------~~~~~~~~~~~~D~~d~~~~~~~~~----  120 (198)
                      .++|+++||||+  |+||.+++++|+++|++|++++|+..+...       .....++.++.+|++|.+++.++++    
T Consensus        18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (267)
T 3gdg_A           18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVA   97 (267)
T ss_dssp             CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence            467899999999  899999999999999999999987654211       1124578999999999998887765    


Q ss_pred             ---CCCEEEEccccCCC----------CccceehhhHHHHHHHHHH----HHcCCCEEEEeeccc-c-CCCCCCcchHHH
Q 029125          121 ---GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAAD-F-GVANYLLQGYYE  181 (198)
Q Consensus       121 ---~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~-~-~~~~~~~~~Y~~  181 (198)
                         ++|+||||||....          ++..+++|+.+++++++++    ++.+.++||++||.. + +...++...|+.
T Consensus        98 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~  177 (267)
T 3gdg_A           98 DFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNV  177 (267)
T ss_dssp             HTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHHHHH
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCcchH
Confidence               57999999996431          2456899999999988887    445667999999943 2 223346789999


Q ss_pred             HHHHHHHHHHhh
Q 029125          182 GKRAAETELLTR  193 (198)
Q Consensus       182 sK~~~e~~l~~~  193 (198)
                      +|++.+.+++..
T Consensus       178 sK~a~~~~~~~l  189 (267)
T 3gdg_A          178 AKAGCIHMARSL  189 (267)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999888754

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.82  E-value=6.7e-20  Score=144.70  Aligned_cols=139  Identities=12%  Similarity=0.008  Sum_probs=107.9

Q ss_pred             CCCeEEEEcCC--chhHHHHHHHHHHCCCeEEEeecCCCCcc--cc--cCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           55 PSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSSL--RD--SWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        55 ~~~~vlvtGat--G~iG~~l~~~l~~~g~~V~~l~r~~~~~~--~~--~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      ++|+++||||+  |+||++++++|+++|++|++++|+.....  ..  .......++.+|++|++++.++++       +
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999  99999999999999999999999762110  00  011235789999999999888775       6


Q ss_pred             CCEEEEccccCCC---------------CccceehhhHHHHHHHHHHHHcC--CCEEEEeeccccCCCCCCcchHHHHHH
Q 029125          122 VTAVISCVGGFGS---------------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKR  184 (198)
Q Consensus       122 ~d~vi~~ag~~~~---------------~~~~~~~n~~~~~~~~~a~~~~~--~~~~v~~Ss~~~~~~~~~~~~Y~~sK~  184 (198)
                      +|+||||||....               ++..+++|+.+++++++++...-  .++||++||...-.+.++...|+.+|+
T Consensus        88 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  167 (265)
T 1qsg_A           88 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKA  167 (265)
T ss_dssp             EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHHH
T ss_pred             CCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCchHHHHHHH
Confidence            8999999996431               23467899999999999997642  258999999543344456678999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.+.+++..
T Consensus       168 a~~~~~~~l  176 (265)
T 1qsg_A          168 SLEANVRYM  176 (265)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999888754

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.81  E-value=2.2e-19  Score=143.37  Aligned_cols=140  Identities=14%  Similarity=0.143  Sum_probs=108.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC-CCccc---c---cCCCCeEEEEccCCC----HHHHHHHhc--
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG-RSSLR---D---SWANNVIWHQGNLLS----SDSWKEALD--  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~-~~~~~---~---~~~~~~~~~~~D~~d----~~~~~~~~~--  120 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+. .....   .   ....++.++.+|++|    ++++.++++  
T Consensus        21 l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           21 MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999986 32110   0   123578899999999    888887765  


Q ss_pred             -----CCCEEEEccccCCC--------------------CccceehhhHHHHHHHHHHHHc----C------CCEEEEee
Q 029125          121 -----GVTAVISCVGGFGS--------------------NSYMYKINGTANINAIRAASEK----G------VKRFVYIS  165 (198)
Q Consensus       121 -----~~d~vi~~ag~~~~--------------------~~~~~~~n~~~~~~~~~a~~~~----~------~~~~v~~S  165 (198)
                           ++|+||||||....                    +...+++|+.+++.+++++...    +      .++||++|
T Consensus       101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~is  180 (288)
T 2x9g_A          101 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLC  180 (288)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEEC
T ss_pred             HHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEe
Confidence                 78999999995321                    1235679999999998887543    2      45999999


Q ss_pred             ccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          166 AADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       166 s~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      |.....+.+....|+.+|++.+.+.+..
T Consensus       181 S~~~~~~~~~~~~Y~asKaa~~~l~~~l  208 (288)
T 2x9g_A          181 DAMVDQPCMAFSLYNMGKHALVGLTQSA  208 (288)
T ss_dssp             CTTTTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCCCCCchHHHHHHHHHHHHHHH
Confidence            9544445566788999999999877654

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.81  E-value=5.1e-20  Score=141.86  Aligned_cols=125  Identities=13%  Similarity=0.057  Sum_probs=103.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc---CCCEEEEccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD---GVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~vi~~ag  130 (198)
                      .++|+++||||+|+||++++++|+++|++|++++|+..               +|++|+++++++++   ++|++|||||
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------~D~~~~~~v~~~~~~~g~id~lv~nAg   68 (223)
T 3uce_A            4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------LDISDEKSVYHYFETIGAFDHLIVTAG   68 (223)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------CCTTCHHHHHHHHHHHCSEEEEEECCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------cCCCCHHHHHHHHHHhCCCCEEEECCC
Confidence            35689999999999999999999999999999998643               79999999988876   6899999999


Q ss_pred             cCC-----------CCccceehhhHHHHHHHHHHHHcC--CCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          131 GFG-----------SNSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       131 ~~~-----------~~~~~~~~n~~~~~~~~~a~~~~~--~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ...           .++..+++|+.+++++++++...-  .++||++||.....+.++...|+.+|++.+.+.+..
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~l  144 (223)
T 3uce_A           69 SYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANTYVKAAINAAIEATTKVL  144 (223)
T ss_dssp             CCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCchHHHHHHHHHHHHHHHH
Confidence            652           123457899999999999997642  248999999654455667789999999999887754

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.81  E-value=9.7e-20  Score=143.73  Aligned_cols=142  Identities=11%  Similarity=-0.030  Sum_probs=111.9

Q ss_pred             CCCCCCeEEEEcCC--chhHHHHHHHHHHCCCeEEEeecCCCCccc----ccCCCCeEEEEccCCCHHHHHHHhc-----
Q 029125           52 PPPPSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        52 ~~~~~~~vlvtGat--G~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      ...++|+|+||||+  |+||++++++|+++|++|++++|+......    .....++.++.+|++|++++.++++     
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            45678999999999  999999999999999999999997432110    0112458899999999999888775     


Q ss_pred             --CCCEEEEccccCCC---------------CccceehhhHHHHHHHHHHHHcC--CCEEEEeeccccCCCCCCcchHHH
Q 029125          121 --GVTAVISCVGGFGS---------------NSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYE  181 (198)
Q Consensus       121 --~~d~vi~~ag~~~~---------------~~~~~~~n~~~~~~~~~a~~~~~--~~~~v~~Ss~~~~~~~~~~~~Y~~  181 (198)
                        ++|+||||||....               +...+++|+.++.++++++...-  .++||++||.....+.+....|+.
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  169 (271)
T 3ek2_A           90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTMGL  169 (271)
T ss_dssp             CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHH
T ss_pred             cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCccchhH
Confidence              57999999996421               13457899999999999986642  348999999654455667789999


Q ss_pred             HHHHHHHHHHhh
Q 029125          182 GKRAAETELLTR  193 (198)
Q Consensus       182 sK~~~e~~l~~~  193 (198)
                      +|++.+.+.+..
T Consensus       170 sKaa~~~~~~~l  181 (271)
T 3ek2_A          170 AKAALEASVRYL  181 (271)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999887754

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.81  E-value=5.6e-20  Score=147.19  Aligned_cols=140  Identities=18%  Similarity=0.115  Sum_probs=109.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEee-cCCCCccc---c---cCCCCeEEEEccCCCHH-------------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLS-RSGRSSLR---D---SWANNVIWHQGNLLSSD-------------  113 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~-r~~~~~~~---~---~~~~~~~~~~~D~~d~~-------------  113 (198)
                      .++|+++||||+|+||++++++|+++|++|++++ |+......   .   ....++.++.+|++|.+             
T Consensus         7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (291)
T 1e7w_A            7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV   86 (291)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence            3568999999999999999999999999999999 87532110   0   12357899999999988             


Q ss_pred             ----HHHHHhc-------CCCEEEEccccCCC------------------------CccceehhhHHHHHHHHHHH----
Q 029125          114 ----SWKEALD-------GVTAVISCVGGFGS------------------------NSYMYKINGTANINAIRAAS----  154 (198)
Q Consensus       114 ----~~~~~~~-------~~d~vi~~ag~~~~------------------------~~~~~~~n~~~~~~~~~a~~----  154 (198)
                          ++.++++       ++|+||||||....                        ++..+++|+.+++++++++.    
T Consensus        87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~  166 (291)
T 1e7w_A           87 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  166 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence                8887765       78999999995421                        12457899999998888875    


Q ss_pred             HcC------CCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          155 EKG------VKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       155 ~~~------~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      +.+      .++||++||.....+.+....|+.+|++.+.+.+..
T Consensus       167 ~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~l  211 (291)
T 1e7w_A          167 GTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSA  211 (291)
T ss_dssp             TSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             hcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHH
Confidence            334      579999999554445566789999999999887754

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.81  E-value=3e-19  Score=143.14  Aligned_cols=128  Identities=24%  Similarity=0.318  Sum_probs=100.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC-Cc-----cc---ccCCCCeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR-SS-----LR---DSWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~-~~-----~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      +|++|+||||||+||++++++|+++|++|++++|+.. ..     ..   .....+++++.+|+.|++++.++++++|+|
T Consensus         1 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~v   80 (307)
T 2gas_A            1 TENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIV   80 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CCcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEE
Confidence            3678999999999999999999999999999999861 10     00   011257899999999999999999999999


Q ss_pred             EEccccCCCCccceehhhHHHHHHHHHHHHcC-CCEEEEeeccccC----CCCCC-cchHHHHHHHHHHHHHhh
Q 029125          126 ISCVGGFGSNSYMYKINGTANINAIRAASEKG-VKRFVYISAADFG----VANYL-LQGYYEGKRAAETELLTR  193 (198)
Q Consensus       126 i~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~-~~~~v~~Ss~~~~----~~~~~-~~~Y~~sK~~~e~~l~~~  193 (198)
                      ||+++...         +.++.+++++|++.+ +++||+ |+....    .+..+ ...| .+|+.+|.++++.
T Consensus        81 i~~a~~~~---------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~  143 (307)
T 2gas_A           81 ICAAGRLL---------IEDQVKIIKAIKEAGNVKKFFP-SEFGLDVDRHDAVEPVRQVF-EEKASIRRVIEAE  143 (307)
T ss_dssp             EECSSSSC---------GGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHHH
T ss_pred             EECCcccc---------cccHHHHHHHHHhcCCceEEee-cccccCcccccCCCcchhHH-HHHHHHHHHHHHc
Confidence            99998643         567789999999998 999984 432211    11122 4578 9999999999865

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.81  E-value=7.5e-20  Score=145.50  Aligned_cols=140  Identities=16%  Similarity=0.087  Sum_probs=109.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc------CCCEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD------GVTAV  125 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~------~~d~v  125 (198)
                      .++++++||||+|+||++++++|+++|++|++++|+..+...  .....++.++.+|++|.+++.++++      ++|++
T Consensus        28 l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l  107 (281)
T 3ppi_A           28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA  107 (281)
T ss_dssp             GTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence            356899999999999999999999999999999997543111  1224578999999999999888775      57999


Q ss_pred             EEcc-ccCC---------------CCccceehhhHHHHHHHHHHHH----------cCCCEEEEeeccccCCCCCCcchH
Q 029125          126 ISCV-GGFG---------------SNSYMYKINGTANINAIRAASE----------KGVKRFVYISAADFGVANYLLQGY  179 (198)
Q Consensus       126 i~~a-g~~~---------------~~~~~~~~n~~~~~~~~~a~~~----------~~~~~~v~~Ss~~~~~~~~~~~~Y  179 (198)
                      |||+ +...               .+...+++|+.+++++++++..          .+.++||++||...-.+.+....|
T Consensus       108 v~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  187 (281)
T 3ppi_A          108 VVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAY  187 (281)
T ss_dssp             EECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTTCHHH
T ss_pred             EEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCCCccc
Confidence            9994 4321               0245678999999998888742          234589999996544556677899


Q ss_pred             HHHHHHHHHHHHhh
Q 029125          180 YEGKRAAETELLTR  193 (198)
Q Consensus       180 ~~sK~~~e~~l~~~  193 (198)
                      +.+|++.+.+.+..
T Consensus       188 ~asKaa~~~~~~~l  201 (281)
T 3ppi_A          188 AAAKAGVIGLTIAA  201 (281)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999877653

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.81  E-value=8.3e-20  Score=148.65  Aligned_cols=140  Identities=18%  Similarity=0.115  Sum_probs=108.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEee-cCCCCccc---c---cCCCCeEEEEccCCCHH-------------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLS-RSGRSSLR---D---SWANNVIWHQGNLLSSD-------------  113 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~-r~~~~~~~---~---~~~~~~~~~~~D~~d~~-------------  113 (198)
                      .++|+++||||+|+||++++++|+++|++|++++ |+......   .   ....++.++.+|++|.+             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            4568999999999999999999999999999999 76432110   0   12357899999999988             


Q ss_pred             ----HHHHHhc-------CCCEEEEccccCCC------------------------CccceehhhHHHHHHHHHHH----
Q 029125          114 ----SWKEALD-------GVTAVISCVGGFGS------------------------NSYMYKINGTANINAIRAAS----  154 (198)
Q Consensus       114 ----~~~~~~~-------~~d~vi~~ag~~~~------------------------~~~~~~~n~~~~~~~~~a~~----  154 (198)
                          ++.++++       ++|+||||||....                        +...+++|+.+++++++++.    
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~  203 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  203 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                8887765       78999999995321                        12357899999998888875    


Q ss_pred             HcC------CCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          155 EKG------VKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       155 ~~~------~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      +.+      .++||++||.....+.+....|+.+|++.+.+.+..
T Consensus       204 ~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~l  248 (328)
T 2qhx_A          204 GTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSA  248 (328)
T ss_dssp             HSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             hcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHH
Confidence            334      579999999544445566789999999999887754

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.80  E-value=6.9e-19  Score=140.01  Aligned_cols=141  Identities=12%  Similarity=-0.001  Sum_probs=110.1

Q ss_pred             CCCCCeEEEEcCCch--hHHHHHHHHHHCCCeEEEeecCCCCccc---ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           53 PPPSEKLLVLGGNGF--VGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~--iG~~l~~~l~~~g~~V~~l~r~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      ..++|+++||||+|+  ||.+++++|+++|++|++++|+......   .....++.++.+|++|.+++.++++       
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWD  102 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence            346789999999955  9999999999999999999998621110   1112458999999999999888765       


Q ss_pred             CCCEEEEccccCCC---------------CccceehhhHHHHHHHHHHHHc---CCCEEEEeeccccCCCCCCcchHHHH
Q 029125          121 GVTAVISCVGGFGS---------------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEG  182 (198)
Q Consensus       121 ~~d~vi~~ag~~~~---------------~~~~~~~n~~~~~~~~~a~~~~---~~~~~v~~Ss~~~~~~~~~~~~Y~~s  182 (198)
                      ++|+||||||....               +...+++|+.++.++++++...   ..++||++||.....+.+....|+.+
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  182 (280)
T 3nrc_A          103 GLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGVA  182 (280)
T ss_dssp             SCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTTHHHHHH
T ss_pred             CCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCchhhHHH
Confidence            57999999996431               1345789999999999988643   35699999996545556677899999


Q ss_pred             HHHHHHHHHhh
Q 029125          183 KRAAETELLTR  193 (198)
Q Consensus       183 K~~~e~~l~~~  193 (198)
                      |++.+.+++..
T Consensus       183 Kaal~~~~~~l  193 (280)
T 3nrc_A          183 KASLEATVRYT  193 (280)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999887753

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.80  E-value=2.8e-19  Score=144.23  Aligned_cols=125  Identities=25%  Similarity=0.334  Sum_probs=100.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      +++|+||||||++|++++++|+++|++|++++|+......   .....+++++.+|+.|++++.++++++|+|||+++..
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~   90 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFP   90 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchh
Confidence            4689999999999999999999999999999998652211   0113578999999999999999999999999999863


Q ss_pred             CCCccceehhhHHHHHHHHHHHHcC-CCEEEEeeccccCCC------CCC-cchHHHHHHHHHHHHHhh
Q 029125          133 GSNSYMYKINGTANINAIRAASEKG-VKRFVYISAADFGVA------NYL-LQGYYEGKRAAETELLTR  193 (198)
Q Consensus       133 ~~~~~~~~~n~~~~~~~~~a~~~~~-~~~~v~~Ss~~~~~~------~~~-~~~Y~~sK~~~e~~l~~~  193 (198)
                      .         +.++.+++++|++.+ +++||+ |+  |+..      ..+ ...| .+|..+|.++++.
T Consensus        91 ~---------~~~~~~l~~aa~~~g~v~~~v~-S~--~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~  146 (318)
T 2r6j_A           91 Q---------ILDQFKILEAIKVAGNIKRFLP-SD--FGVEEDRINALPPFEALI-ERKRMIRRAIEEA  146 (318)
T ss_dssp             G---------STTHHHHHHHHHHHCCCCEEEC-SC--CSSCTTTCCCCHHHHHHH-HHHHHHHHHHHHT
T ss_pred             h---------hHHHHHHHHHHHhcCCCCEEEe-ec--cccCcccccCCCCcchhH-HHHHHHHHHHHhc
Confidence            2         456789999999998 999985 43  3321      112 3467 9999999999874

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.80  E-value=2.4e-19  Score=141.90  Aligned_cols=139  Identities=14%  Similarity=0.029  Sum_probs=109.0

Q ss_pred             CCCCeEEEEcC--CchhHHHHHHHHHHCCCeEEEeecCCCCc---ccccCCCCeEEEEccCCCHHHHHHHhc--------
Q 029125           54 PPSEKLLVLGG--NGFVGSHICREALDRGLTVASLSRSGRSS---LRDSWANNVIWHQGNLLSSDSWKEALD--------  120 (198)
Q Consensus        54 ~~~~~vlvtGa--tG~iG~~l~~~l~~~g~~V~~l~r~~~~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~--------  120 (198)
                      .++|+++||||  +|+||++++++|+++|++|++++|+..+.   .......++.++.+|++|++++.++++        
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   84 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            35689999999  99999999999999999999999976431   111223467899999999998888775        


Q ss_pred             --CCCEEEEccccCC---------------CCccceehhhHHHHHHHHHHHHcC--CCEEEEeeccccCCCCCCcchHHH
Q 029125          121 --GVTAVISCVGGFG---------------SNSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYE  181 (198)
Q Consensus       121 --~~d~vi~~ag~~~---------------~~~~~~~~n~~~~~~~~~a~~~~~--~~~~v~~Ss~~~~~~~~~~~~Y~~  181 (198)
                        ++|+||||||...               .|+..+++|+.+++++++++...-  .++||++||... .+.+....|+.
T Consensus        85 ~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~-~~~~~~~~Y~a  163 (269)
T 2h7i_A           85 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-RAMPAYNWMTV  163 (269)
T ss_dssp             TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-SCCTTTHHHHH
T ss_pred             CCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc-cccCchHHHHH
Confidence              7899999999643               123457899999999999996532  258999998532 34455678999


Q ss_pred             HHHHHHHHHHhh
Q 029125          182 GKRAAETELLTR  193 (198)
Q Consensus       182 sK~~~e~~l~~~  193 (198)
                      +|++.+.+.+..
T Consensus       164 sKaa~~~l~~~l  175 (269)
T 2h7i_A          164 AKSALESVNRFV  175 (269)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999887754

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.80  E-value=1.2e-18  Score=137.03  Aligned_cols=141  Identities=10%  Similarity=-0.035  Sum_probs=108.6

Q ss_pred             CCCCCeEEEEcCCc--hhHHHHHHHHHHCCCeEEEeecCCCCcc------cccCCCCeEEEEccCCCHHHHHHHhc----
Q 029125           53 PPPSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRSSL------RDSWANNVIWHQGNLLSSDSWKEALD----  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG--~iG~~l~~~l~~~g~~V~~l~r~~~~~~------~~~~~~~~~~~~~D~~d~~~~~~~~~----  120 (198)
                      ..++|+++||||+|  +||.++++.|+++|++|++.+|+.....      ......++.++.+|++|++++.++++    
T Consensus         3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (256)
T 4fs3_A            3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK   82 (256)
T ss_dssp             CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            45789999999876  9999999999999999999999864411      11123478999999999998887764    


Q ss_pred             ---CCCEEEEccccCCC--------------CccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHH
Q 029125          121 ---GVTAVISCVGGFGS--------------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYE  181 (198)
Q Consensus       121 ---~~d~vi~~ag~~~~--------------~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~  181 (198)
                         ++|++|||+|....              |...+++|+.+.+.+.+++...  .-++||++||.....+.+....|+.
T Consensus        83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~~~Y~a  162 (256)
T 4fs3_A           83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGV  162 (256)
T ss_dssp             HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTTHHHHH
T ss_pred             HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccchhhHH
Confidence               68999999985321              1223578888888777777543  2358999999655556667789999


Q ss_pred             HHHHHHHHHHhh
Q 029125          182 GKRAAETELLTR  193 (198)
Q Consensus       182 sK~~~e~~l~~~  193 (198)
                      ||++.+.+.+..
T Consensus       163 sKaal~~ltr~l  174 (256)
T 4fs3_A          163 AKASLEANVKYL  174 (256)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999877653

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.80  E-value=3.6e-19  Score=143.67  Aligned_cols=126  Identities=24%  Similarity=0.297  Sum_probs=100.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC-CC----ccc---ccCCCCeEEEEccCCCHHHHHHHhcCCCEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG-RS----SLR---DSWANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~-~~----~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi  126 (198)
                      +|++|+||||||+||++++++|+++|++|++++|+. ..    ...   .....+++++.+|++|++++.++++++|+||
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi   82 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI   82 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence            467899999999999999999999999999999986 21    100   0113578999999999999999999999999


Q ss_pred             EccccCCCCccceehhhHHHHHHHHHHHHcC-CCEEEEeeccccCC------CCCC-cchHHHHHHHHHHHHHhh
Q 029125          127 SCVGGFGSNSYMYKINGTANINAIRAASEKG-VKRFVYISAADFGV------ANYL-LQGYYEGKRAAETELLTR  193 (198)
Q Consensus       127 ~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~-~~~~v~~Ss~~~~~------~~~~-~~~Y~~sK~~~e~~l~~~  193 (198)
                      |+++...         +.++.+++++|++.+ +++||+ |+  |+.      +..+ ...| .+|+.+|.++++.
T Consensus        83 ~~a~~~~---------~~~~~~l~~aa~~~g~v~~~v~-S~--~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~  144 (321)
T 3c1o_A           83 SALPFPM---------ISSQIHIINAIKAAGNIKRFLP-SD--FGCEEDRIKPLPPFESVL-EKKRIIRRAIEAA  144 (321)
T ss_dssp             ECCCGGG---------SGGGHHHHHHHHHHCCCCEEEC-SC--CSSCGGGCCCCHHHHHHH-HHHHHHHHHHHHH
T ss_pred             ECCCccc---------hhhHHHHHHHHHHhCCccEEec-cc--cccCccccccCCCcchHH-HHHHHHHHHHHHc
Confidence            9998632         566789999999998 999983 33  332      1112 3578 9999999999865

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.80  E-value=3.1e-19  Score=140.31  Aligned_cols=140  Identities=15%  Similarity=0.081  Sum_probs=108.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHH---CCCeEEEeecCCCCccc--cc-----CCCCeEEEEccCCCHHHHHHHhc---
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALD---RGLTVASLSRSGRSSLR--DS-----WANNVIWHQGNLLSSDSWKEALD---  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~---~g~~V~~l~r~~~~~~~--~~-----~~~~~~~~~~D~~d~~~~~~~~~---  120 (198)
                      .++|+++||||+|+||++++++|++   +|++|++++|+......  ..     ...++.++.+|++|++++.++++   
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            4568999999999999999999999   89999999997543111  00     03468899999999998877653   


Q ss_pred             ------CCC--EEEEccccCCC-------------CccceehhhHHHHHHHHHHHHc------CCCEEEEeeccccCCCC
Q 029125          121 ------GVT--AVISCVGGFGS-------------NSYMYKINGTANINAIRAASEK------GVKRFVYISAADFGVAN  173 (198)
Q Consensus       121 ------~~d--~vi~~ag~~~~-------------~~~~~~~n~~~~~~~~~a~~~~------~~~~~v~~Ss~~~~~~~  173 (198)
                            ++|  +||||||....             ++..+++|+.+++++++++...      +.++||++||...-.+.
T Consensus        84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY  163 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC
T ss_pred             hccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCC
Confidence                  368  99999996421             1235789999999999998653      23579999995444455


Q ss_pred             CCcchHHHHHHHHHHHHHhh
Q 029125          174 YLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       174 ~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ++...|+.+|++.+.+.+..
T Consensus       164 ~~~~~Y~asKaa~~~~~~~l  183 (259)
T 1oaa_A          164 KGWGLYCAGKAARDMLYQVL  183 (259)
T ss_dssp             TTCHHHHHHHHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHH
Confidence            66789999999999988764

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.79  E-value=3e-19  Score=140.55  Aligned_cols=138  Identities=12%  Similarity=0.008  Sum_probs=103.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--c---cCCCCeEEEEccCCCHHHHHHHhc--------C
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D---SWANNVIWHQGNLLSSDSWKEALD--------G  121 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~---~~~~~~~~~~~D~~d~~~~~~~~~--------~  121 (198)
                      ++|+++||||+|+||++++++|+++|++|++++|+......  .   ....++.++.+|++|++++.++++        +
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            56899999999999999999999999999999997543111  0   113468899999999988776643        5


Q ss_pred             CCEEEEccc--cC-------C--------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHH
Q 029125          122 VTAVISCVG--GF-------G--------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYY  180 (198)
Q Consensus       122 ~d~vi~~ag--~~-------~--------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~  180 (198)
                      +|+||||||  ..       .        .|+..+++|+.+++++.+++.    +.+.++||++||...-. ..+...|+
T Consensus        84 id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~~~Y~  162 (260)
T 2qq5_A           84 LDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQ-YMFNVPYG  162 (260)
T ss_dssp             CCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTS-CCSSHHHH
T ss_pred             ceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcC-CCCCCchH
Confidence            799999994  21       1        123567889999987776663    45668999999943222 23457899


Q ss_pred             HHHHHHHHHHHhh
Q 029125          181 EGKRAAETELLTR  193 (198)
Q Consensus       181 ~sK~~~e~~l~~~  193 (198)
                      .+|++.+.+.+..
T Consensus       163 asK~a~~~~~~~l  175 (260)
T 2qq5_A          163 VGKAACDKLAADC  175 (260)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999987754

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.79  E-value=8.3e-19  Score=150.43  Aligned_cols=140  Identities=18%  Similarity=0.203  Sum_probs=111.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcc--c------ccCCCCeEEEEccCCCHHHHHHHhcC--C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSL--R------DSWANNVIWHQGNLLSSDSWKEALDG--V  122 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~--~------~~~~~~~~~~~~D~~d~~~~~~~~~~--~  122 (198)
                      ..+++|+||||+|+||.+++++|+++|+ +|++++|+.....  .      .....++.++.+|++|.+++.+++++  +
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~l  336 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPP  336 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCC
Confidence            4568999999999999999999999998 6889998753211  0      11234688999999999999999875  9


Q ss_pred             CEEEEccccCCC----------CccceehhhHHHHHHHHHHHHc-CCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 029125          123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK-GVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       123 d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~~-~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      |+||||||....          +...+++|+.|+.++.+++... +.++||++||...-.+......|+.+|.+.|.+++
T Consensus       337 d~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g~~~YaaaKa~ld~la~  416 (511)
T 2z5l_A          337 NAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQGAYAAANAALDALAE  416 (511)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTTBHHHHHHHHHHHHHHH
T ss_pred             cEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence            999999996542          2345689999999999998766 77899999995433344566799999999999887


Q ss_pred             hh
Q 029125          192 TR  193 (198)
Q Consensus       192 ~~  193 (198)
                      ..
T Consensus       417 ~~  418 (511)
T 2z5l_A          417 RR  418 (511)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.78  E-value=6.9e-19  Score=150.17  Aligned_cols=140  Identities=23%  Similarity=0.268  Sum_probs=111.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCe-EEEeecCCCCcc--c------ccCCCCeEEEEccCCCHHHHHHHhcCC--
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLT-VASLSRSGRSSL--R------DSWANNVIWHQGNLLSSDSWKEALDGV--  122 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~-V~~l~r~~~~~~--~------~~~~~~~~~~~~D~~d~~~~~~~~~~~--  122 (198)
                      ..+++++||||+|+||.++++.|+++|++ |++++|+.....  .      .....++.++.+|++|.+++.++++++  
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~  303 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD  303 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence            45789999999999999999999999985 999999764211  0      112356889999999999999988764  


Q ss_pred             ----CEEEEccccCCC----------CccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          123 ----TAVISCVGGFGS----------NSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       123 ----d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                          |+||||||....          +...+++|+.|+.++.+++.+.+.++||++||...-.+......|+.+|...+.
T Consensus       304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~~~Yaaaka~l~~  383 (486)
T 2fr1_A          304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDG  383 (486)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHH
T ss_pred             cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCCHHHHHHHHHHHH
Confidence                999999996532          234578899999999999988888999999994322234456789999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +.++.
T Consensus       384 la~~~  388 (486)
T 2fr1_A          384 LAQQR  388 (486)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77643

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.78  E-value=6.4e-19  Score=151.42  Aligned_cols=126  Identities=16%  Similarity=0.079  Sum_probs=99.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCC--
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG--  133 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~--  133 (198)
                      +|+|+||||+||||++|+++|+++|++|++++|+..+.         ..+.+|+.+.  +.++++++|+|||+||...  
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~---------~~v~~d~~~~--~~~~l~~~D~Vih~A~~~~~~  215 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP---------GKRFWDPLNP--ASDLLDGADVLVHLAGEPIFG  215 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT---------TCEECCTTSC--CTTTTTTCSEEEECCCC----
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc---------cceeecccch--hHHhcCCCCEEEECCCCcccc
Confidence            78999999999999999999999999999999986542         1256787643  4567789999999999642  


Q ss_pred             -----CCccceehhhHHHHHHHHH-HHHcCCCEEEEeec-cccC-C---------CCCCcchHHHHHHHHHHHHHh
Q 029125          134 -----SNSYMYKINGTANINAIRA-ASEKGVKRFVYISA-ADFG-V---------ANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       134 -----~~~~~~~~n~~~~~~~~~a-~~~~~~~~~v~~Ss-~~~~-~---------~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                           .+...+++|+.++.+++++ +++.++++|||+|| .+|+ .         ...+.+.|+.+|...|.++..
T Consensus       216 ~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~~  291 (516)
T 3oh8_A          216 RFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAP  291 (516)
T ss_dssp             -CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTHH
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHHHHHH
Confidence                 1234678999999999999 56678899999999 5676 1         122456899999988876543

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.77  E-value=2.2e-19  Score=140.14  Aligned_cols=137  Identities=14%  Similarity=0.036  Sum_probs=94.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHH---HHh---cCCCEEEEc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK---EAL---DGVTAVISC  128 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~---~~~---~~~d~vi~~  128 (198)
                      ++|+++||||+|+||++++++|++ |++|++++|+...........++.++.+|+.|.+...   +.+   .++|+||||
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~   82 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHA   82 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEEC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEEC
Confidence            568999999999999999999988 9999999997544222112356889999998775421   122   268999999


Q ss_pred             cccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          129 VGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       129 ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ||...          .+...+++|+.++.++++++.    +.+ ++||++||...-.+.+....|+.+|++.+.+++..
T Consensus        83 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l  160 (245)
T 3e9n_A           83 AAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHALRGLADAF  160 (245)
T ss_dssp             C----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHHHHHHHHHHH
Confidence            99643          134567899999988888763    334 69999999544445566789999999999888754

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.77  E-value=4.7e-19  Score=139.05  Aligned_cols=136  Identities=13%  Similarity=-0.041  Sum_probs=98.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc----cCCCCeEEEEccCCCHHHHH----HHhcCCCEEEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD----SWANNVIWHQGNLLSSDSWK----EALDGVTAVIS  127 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~----~~~~~~~~~~~D~~d~~~~~----~~~~~~d~vi~  127 (198)
                      ||+++||||+|+||++++++|+++|++|++++|+..+....    ....++..+  |..+.+.+.    +.+.++|+|||
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~   78 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVS   78 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEE
Confidence            57899999999999999999999999999999976542110    012233333  554433322    22347999999


Q ss_pred             ccccC-C----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          128 CVGGF-G----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       128 ~ag~~-~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      |||.. .          .++..+++|+.+++++++++.    +.+.++||++||...-.+.+....|+.+|++.+.+.+.
T Consensus        79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  158 (254)
T 1zmt_A           79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANA  158 (254)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHHHHHH
Confidence            99965 2          124567899999998888874    45667999999954434456678999999999988775


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       159 l  159 (254)
T 1zmt_A          159 L  159 (254)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.77  E-value=2.4e-18  Score=146.83  Aligned_cols=139  Identities=18%  Similarity=0.192  Sum_probs=111.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccc--------ccCCCCeEEEEccCCCHHHHHHHhc-----
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR--------DSWANNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~--------~~~~~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      .+++++||||+|+||.++++.|+++|+ +|++++|+......        .....++.++.+|++|.+++.++++     
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~  317 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED  317 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            348999999999999999999999998 78888886432110        1124578999999999999999886     


Q ss_pred             -CCCEEEEccccC-CC----------CccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          121 -GVTAVISCVGGF-GS----------NSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       121 -~~d~vi~~ag~~-~~----------~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                       .+|+||||||.. ..          +...+++|+.|++++.+++...+.++||++||...-.+......|+++|.+.+.
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g~~~YaAaKa~lda  397 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGGQPGYAAANAYLDA  397 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTTCHHHHHHHHHHHH
T ss_pred             CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCCcHHHHHHHHHHHH
Confidence             379999999975 21          234678999999999999988888999999995433344567789999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +.++.
T Consensus       398 la~~~  402 (496)
T 3mje_A          398 LAEHR  402 (496)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87754

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.77  E-value=9e-19  Score=148.26  Aligned_cols=140  Identities=14%  Similarity=0.012  Sum_probs=109.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc--cCCCCeEEEEccCCCHHHHHHHhc-------C-CC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD--SWANNVIWHQGNLLSSDSWKEALD-------G-VT  123 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~-------~-~d  123 (198)
                      .++++++||||+|+||.++++.|+++|++|++++|+.......  ....++.++.+|++|.+++.++++       + +|
T Consensus       211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id  290 (454)
T 3u0b_A          211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVD  290 (454)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence            3678999999999999999999999999999999864321110  011246789999999988887764       3 99


Q ss_pred             EEEEccccCCC----------CccceehhhHHHHHHHHHHHHc----CCCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          124 AVISCVGGFGS----------NSYMYKINGTANINAIRAASEK----GVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       124 ~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~~----~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      +||||||....          |+..+++|+.+++++.+++...    +.++||++||...-.+......|+.+|.+.+.+
T Consensus       291 ~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKaal~~l  370 (454)
T 3u0b_A          291 ILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGL  370 (454)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHHHHHHH
Confidence            99999996532          3456889999999999998765    567999999954334455678999999988877


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      ++..
T Consensus       371 ~~~l  374 (454)
T 3u0b_A          371 AEAL  374 (454)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6643

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.75  E-value=7.6e-18  Score=144.93  Aligned_cols=141  Identities=16%  Similarity=0.103  Sum_probs=110.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCe-EEEe-ecCCCC------------ccc------ccCCCCeEEEEccCCCHH
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLT-VASL-SRSGRS------------SLR------DSWANNVIWHQGNLLSSD  113 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~-V~~l-~r~~~~------------~~~------~~~~~~~~~~~~D~~d~~  113 (198)
                      .++++++||||+|+||.++++.|+++|++ |+++ +|+..+            ...      .....++.++.+|++|.+
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            45789999999999999999999999987 5555 777422            000      111356899999999999


Q ss_pred             HHHHHhcC------CCEEEEccccCCC----------CccceehhhHHHHHHHHHHHHcC-----CCEEEEeeccccCCC
Q 029125          114 SWKEALDG------VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEKG-----VKRFVYISAADFGVA  172 (198)
Q Consensus       114 ~~~~~~~~------~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~~~-----~~~~v~~Ss~~~~~~  172 (198)
                      ++.++++.      +|+||||||....          +...+++|+.|++++.+++....     .++||++||...-.+
T Consensus       329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g  408 (525)
T 3qp9_A          329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG  408 (525)
T ss_dssp             HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC
T ss_pred             HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC
Confidence            99998864      6999999996532          24567899999999999997765     789999999654445


Q ss_pred             CCCcchHHHHHHHHHHHHHhhC
Q 029125          173 NYLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       173 ~~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                      ......|+++|.+.+.+.++..
T Consensus       409 ~~g~~~YaaaKa~l~~lA~~~~  430 (525)
T 3qp9_A          409 GAGQGAYAAGTAFLDALAGQHR  430 (525)
T ss_dssp             CTTCHHHHHHHHHHHHHHTSCC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHH
Confidence            5667899999999999876543

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.75  E-value=2.1e-18  Score=139.91  Aligned_cols=139  Identities=16%  Similarity=0.115  Sum_probs=100.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC---------CCcc---cccCCCCeEEEEccCCCHHHHHHHh--
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG---------RSSL---RDSWANNVIWHQGNLLSSDSWKEAL--  119 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~---------~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~--  119 (198)
                      .++|+++||||+|+||++++++|+++|++|+++++..         .+..   ......+ ....+|+.|.+++.+++  
T Consensus         7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~-~~~~~D~~~~~~~~~~~~~   85 (319)
T 1gz6_A            7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG-GKAVANYDSVEAGEKLVKT   85 (319)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT-CEEEEECCCGGGHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhC-CeEEEeCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999986632         1100   0000011 12357999987766554  


Q ss_pred             -----cCCCEEEEccccCCC----------CccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHH
Q 029125          120 -----DGVTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYY  180 (198)
Q Consensus       120 -----~~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~  180 (198)
                           .++|+||||||....          ++..+++|+.|++++++++    ++.+.++||++||...-.+.++...|+
T Consensus        86 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~~Y~  165 (319)
T 1gz6_A           86 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYS  165 (319)
T ss_dssp             HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCHHHH
Confidence                 368999999996432          2456789999999888887    345678999999943222344567899


Q ss_pred             HHHHHHHHHHHhh
Q 029125          181 EGKRAAETELLTR  193 (198)
Q Consensus       181 ~sK~~~e~~l~~~  193 (198)
                      .||++.+.+.+..
T Consensus       166 aSK~a~~~~~~~l  178 (319)
T 1gz6_A          166 AAKLGLLGLANTL  178 (319)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999887754

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.74  E-value=1.9e-18  Score=134.80  Aligned_cols=135  Identities=13%  Similarity=0.033  Sum_probs=96.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEe-e--cCCCCccc--ccCCCCeEEEEccCCCHHHHH-HH---hcCCCEEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASL-S--RSGRSSLR--DSWANNVIWHQGNLLSSDSWK-EA---LDGVTAVI  126 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l-~--r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~-~~---~~~~d~vi  126 (198)
                      +|+++||||+|+||++++++|+++|++|+++ +  |+..+...  ... .+..+.  |..+.+.+. ++   +.++|+||
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~~~~~~--~~~~v~~~~~~~~~~~g~iD~lv   77 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-PGTIAL--AEQKPERLVDATLQHGEAIDTIV   77 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-TTEEEC--CCCCGGGHHHHHGGGSSCEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-CCCccc--CHHHHHHHHHHHHHHcCCCCEEE
Confidence            4789999999999999999999999999999 6  87543111  111 222322  444433322 22   23689999


Q ss_pred             EccccCCC-------------CccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          127 SCVGGFGS-------------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       127 ~~ag~~~~-------------~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      ||||....             ++..+++|+.+++++++++.    +.+.++||++||...-.+.+....|+.+|++.+.+
T Consensus        78 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  157 (244)
T 1zmo_A           78 SNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVAL  157 (244)
T ss_dssp             ECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHHHHHHH
T ss_pred             ECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHHHHHHH
Confidence            99995432             23467899999998888874    45667999999954444556677999999999988


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      .+..
T Consensus       158 ~~~l  161 (244)
T 1zmo_A          158 VESA  161 (244)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7754

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.71  E-value=9.2e-17  Score=128.41  Aligned_cols=119  Identities=16%  Similarity=0.146  Sum_probs=86.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC--C-
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF--G-  133 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~--~-  133 (198)
                      |||||||||||||++|+++|+++||+|++++|++.+.       .   +..|    +...+.++++|+|||+++..  . 
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~-------~---~~~~----~~~~~~l~~~d~vihla~~~i~~~   66 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG-------R---ITWD----ELAASGLPSCDAAVNLAGENILNP   66 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-------E---EEHH----HHHHHCCCSCSEEEECCCCCSSCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC-------e---eecc----hhhHhhccCCCEEEEeccCcccch
Confidence            6899999999999999999999999999999975431       1   1222    22345678999999999842  1 


Q ss_pred             --CC-----ccceehhhHHHHHHHHHHHHcCCC--EEEEeec-cccCCC----------CCCcchHHHHHHHHHHH
Q 029125          134 --SN-----SYMYKINGTANINAIRAASEKGVK--RFVYISA-ADFGVA----------NYLLQGYYEGKRAAETE  189 (198)
Q Consensus       134 --~~-----~~~~~~n~~~~~~~~~a~~~~~~~--~~v~~Ss-~~~~~~----------~~~~~~Y~~sK~~~e~~  189 (198)
                        .|     ...++.|+.++.++++++.+.+.+  +||+.|| .+|+..          ..+...|+..|...|..
T Consensus        67 ~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~~  142 (298)
T 4b4o_A           67 LRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAA  142 (298)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHHH
Confidence              12     235678999999999999887654  5888888 556542          23345677777766654

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.70  E-value=1.6e-17  Score=145.39  Aligned_cols=141  Identities=13%  Similarity=0.055  Sum_probs=100.5

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC---------CCccc---ccCCCCeEEEEccCCCHHHHHHHh
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG---------RSSLR---DSWANNVIWHQGNLLSSDSWKEAL  119 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~---------~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~  119 (198)
                      ...++|+++||||+|+||++++++|+++|++|++++|+.         .....   .....+. ...+|+.|.+++.+++
T Consensus        15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~D~~d~~~~~~~~   93 (613)
T 3oml_A           15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG-EAVADYNSVIDGAKVI   93 (613)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC-CEEECCCCGGGHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC-eEEEEeCCHHHHHHHH
Confidence            445789999999999999999999999999999998822         11100   0001111 2347999988887776


Q ss_pred             c-------CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcch
Q 029125          120 D-------GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQG  178 (198)
Q Consensus       120 ~-------~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~  178 (198)
                      +       ++|+||||||...          .|+..+++|+.|++++++++    ++.+.++||++||...-.+......
T Consensus        94 ~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~~~  173 (613)
T 3oml_A           94 ETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVN  173 (613)
T ss_dssp             C----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTCHH
T ss_pred             HHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCChH
Confidence            5       5899999999643          23456889999999999887    4456679999999543334456778


Q ss_pred             HHHHHHHHHHHHHhh
Q 029125          179 YYEGKRAAETELLTR  193 (198)
Q Consensus       179 Y~~sK~~~e~~l~~~  193 (198)
                      |+++|++.+.+.+..
T Consensus       174 Y~asKaal~~lt~~l  188 (613)
T 3oml_A          174 YTAAKMGLIGLANTV  188 (613)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999887754

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.66  E-value=5.4e-16  Score=126.05  Aligned_cols=138  Identities=8%  Similarity=-0.049  Sum_probs=100.3

Q ss_pred             CCeEEEEcCCc--hhHHHHHHHHHHCCCeEEEeecCC---------CC----ccc-cc---CCCCeEEEEccCCCH--H-
Q 029125           56 SEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSG---------RS----SLR-DS---WANNVIWHQGNLLSS--D-  113 (198)
Q Consensus        56 ~~~vlvtGatG--~iG~~l~~~l~~~g~~V~~l~r~~---------~~----~~~-~~---~~~~~~~~~~D~~d~--~-  113 (198)
                      +|+++||||++  +||.+++++|+++|++|++.+|++         .+    ... ..   ....+.++.+|+++.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            57899999875  999999999999999999776543         11    000 10   123468889999876  6 


Q ss_pred             -----------------HHHHHhc-------CCCEEEEccccCC------------CCccceehhhHHHHHHHHHHHHcC
Q 029125          114 -----------------SWKEALD-------GVTAVISCVGGFG------------SNSYMYKINGTANINAIRAASEKG  157 (198)
Q Consensus       114 -----------------~~~~~~~-------~~d~vi~~ag~~~------------~~~~~~~~n~~~~~~~~~a~~~~~  157 (198)
                                       ++.++++       ++|++|||||...            .|...+++|+.+++.+.+++...-
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  161 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                             5555543       5899999998531            134568999999999999986532


Q ss_pred             C--CEEEEeeccccCCCCCCcc-hHHHHHHHHHHHHHhh
Q 029125          158 V--KRFVYISAADFGVANYLLQ-GYYEGKRAAETELLTR  193 (198)
Q Consensus       158 ~--~~~v~~Ss~~~~~~~~~~~-~Y~~sK~~~e~~l~~~  193 (198)
                      .  ++||++||.....+.+... .|+.||++.+.+.+..
T Consensus       162 ~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~l  200 (329)
T 3lt0_A          162 KPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVL  200 (329)
T ss_dssp             EEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHH
T ss_pred             hhCCeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHH
Confidence            1  5899999954434444554 8999999999877653

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.65  E-value=1.9e-15  Score=120.89  Aligned_cols=140  Identities=7%  Similarity=-0.085  Sum_probs=94.8

Q ss_pred             CCCCeEEEEcCC--chhHHHHHHHHHHCCCeEEEeecCC-----------CC--cccccCCCC----eEEEEcc------
Q 029125           54 PPSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSG-----------RS--SLRDSWANN----VIWHQGN------  108 (198)
Q Consensus        54 ~~~~~vlvtGat--G~iG~~l~~~l~~~g~~V~~l~r~~-----------~~--~~~~~~~~~----~~~~~~D------  108 (198)
                      .++|+++||||+  |+||++++++|+++|++|++++|++           .+  .........    ...+.+|      
T Consensus         6 l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (297)
T 1d7o_A            6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNP   85 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSG
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccch
Confidence            456899999999  9999999999999999999998531           11  111100011    2334443      


Q ss_pred             --CC----C--------HHHHHHHh-------cCCCEEEEccccCC------------CCccceehhhHHHHHHHHHHHH
Q 029125          109 --LL----S--------SDSWKEAL-------DGVTAVISCVGGFG------------SNSYMYKINGTANINAIRAASE  155 (198)
Q Consensus       109 --~~----d--------~~~~~~~~-------~~~d~vi~~ag~~~------------~~~~~~~~n~~~~~~~~~a~~~  155 (198)
                        +.    |        ++++.+++       .++|+||||||...            .|+..+++|+.+++++++++..
T Consensus        86 ~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  165 (297)
T 1d7o_A           86 EDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLP  165 (297)
T ss_dssp             GGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             hhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence              22    1        33444433       36899999998521            1244678999999999999976


Q ss_pred             cC--CCEEEEeeccccCCCCCCc-chHHHHHHHHHHHHHhh
Q 029125          156 KG--VKRFVYISAADFGVANYLL-QGYYEGKRAAETELLTR  193 (198)
Q Consensus       156 ~~--~~~~v~~Ss~~~~~~~~~~-~~Y~~sK~~~e~~l~~~  193 (198)
                      .-  .++||++||.....+.+.. ..|+.+|++.+.+.+..
T Consensus       166 ~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~l  206 (297)
T 1d7o_A          166 IMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVL  206 (297)
T ss_dssp             GEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHH
T ss_pred             HhccCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHH
Confidence            41  2589999995432333343 58999999999887754

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.65  E-value=3.5e-16  Score=136.61  Aligned_cols=140  Identities=14%  Similarity=0.076  Sum_probs=102.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---ccCCCCeEEEEccC-CCHHHHH-H---HhcCCCEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNL-LSSDSWK-E---ALDGVTAV  125 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---~~~~~~~~~~~~D~-~d~~~~~-~---~~~~~d~v  125 (198)
                      .++|+++||||+++||+++++.|+++|++|++.+|+......   ......+..+.+|+ .+.+.+. +   .+.++|++
T Consensus       320 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiL  399 (604)
T 2et6_A          320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDIL  399 (604)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEE
T ss_pred             cCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEE
Confidence            457899999999999999999999999999999874322111   11123466777888 5544322 2   23479999


Q ss_pred             EEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 029125          126 ISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       126 i~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      |||||...          .|+..+++|+.|++.+.+++.    +.+.++||++||...-.+.+....|++||++...+.+
T Consensus       400 VnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt~  479 (604)
T 2et6_A          400 VNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSK  479 (604)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHHHHHHHH
Confidence            99999642          245578999999998888873    3455799999995433344566789999999998776


Q ss_pred             hh
Q 029125          192 TR  193 (198)
Q Consensus       192 ~~  193 (198)
                      ..
T Consensus       480 ~l  481 (604)
T 2et6_A          480 TM  481 (604)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.63  E-value=1e-15  Score=123.65  Aligned_cols=140  Identities=12%  Similarity=-0.067  Sum_probs=95.2

Q ss_pred             CCCCeEEEEcC--CchhHHHHHHHHHHCCCeEEEeecCC-----------CC--cccccCCC----CeEEEEccC-----
Q 029125           54 PPSEKLLVLGG--NGFVGSHICREALDRGLTVASLSRSG-----------RS--SLRDSWAN----NVIWHQGNL-----  109 (198)
Q Consensus        54 ~~~~~vlvtGa--tG~iG~~l~~~l~~~g~~V~~l~r~~-----------~~--~~~~~~~~----~~~~~~~D~-----  109 (198)
                      .++|+++||||  +|+||++++++|+++|++|++++|++           ..  ........    .+.++.+|+     
T Consensus         7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~   86 (315)
T 2o2s_A            7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKP   86 (315)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSST
T ss_pred             CCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccccc
Confidence            45789999999  89999999999999999999998642           01  00010001    124444443     


Q ss_pred             -------CC--------HHHHHHHh-------cCCCEEEEccccCC------------CCccceehhhHHHHHHHHHHHH
Q 029125          110 -------LS--------SDSWKEAL-------DGVTAVISCVGGFG------------SNSYMYKINGTANINAIRAASE  155 (198)
Q Consensus       110 -------~d--------~~~~~~~~-------~~~d~vi~~ag~~~------------~~~~~~~~n~~~~~~~~~a~~~  155 (198)
                             +|        ++++.+++       .++|++|||||...            .|+..+++|+.+++++++++..
T Consensus        87 ~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  166 (315)
T 2o2s_A           87 EDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGP  166 (315)
T ss_dssp             TSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHST
T ss_pred             chhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence                   22        33444443       36899999998531            1235678999999999999865


Q ss_pred             cC--CCEEEEeeccccCCCCCCc-chHHHHHHHHHHHHHhh
Q 029125          156 KG--VKRFVYISAADFGVANYLL-QGYYEGKRAAETELLTR  193 (198)
Q Consensus       156 ~~--~~~~v~~Ss~~~~~~~~~~-~~Y~~sK~~~e~~l~~~  193 (198)
                      .-  .++||++||...-.+.+.. ..|+.+|++.+.+.+..
T Consensus       167 ~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~l  207 (315)
T 2o2s_A          167 IMNEGGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTL  207 (315)
T ss_dssp             TEEEEEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHH
T ss_pred             HHhcCCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHH
Confidence            31  2589999995432333333 48999999999887653

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.63  E-value=3.6e-15  Score=123.21  Aligned_cols=140  Identities=13%  Similarity=0.043  Sum_probs=101.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHH-CCCeEEEeecCCCCccc-----------------ccCCCCeEEEEccCCCHHHH
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALD-RGLTVASLSRSGRSSLR-----------------DSWANNVIWHQGNLLSSDSW  115 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~-~g~~V~~l~r~~~~~~~-----------------~~~~~~~~~~~~D~~d~~~~  115 (198)
                      ..+|+++||||+++||.++++.|++ +|++|++++|+......                 ......+..+.+|++|++++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            4678999999999999999999999 99999999887543210                 11234678899999999888


Q ss_pred             HHHhc-------CCCEEEEccccC---------------CC-----------------------------CccceehhhH
Q 029125          116 KEALD-------GVTAVISCVGGF---------------GS-----------------------------NSYMYKINGT  144 (198)
Q Consensus       116 ~~~~~-------~~d~vi~~ag~~---------------~~-----------------------------~~~~~~~n~~  144 (198)
                      .++++       ++|++|||||..               ..                             |+..+++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence            77664       589999999853               00                             1223466776


Q ss_pred             HHH-HHHHHHHHcC----CCEEEEeeccccCCCCCCc--chHHHHHHHHHHHHHhh
Q 029125          145 ANI-NAIRAASEKG----VKRFVYISAADFGVANYLL--QGYYEGKRAAETELLTR  193 (198)
Q Consensus       145 ~~~-~~~~a~~~~~----~~~~v~~Ss~~~~~~~~~~--~~Y~~sK~~~e~~l~~~  193 (198)
                      +.+ .+++++....    -.+||++||.....+.+..  ..|+++|.+.+.+.+..
T Consensus       205 ~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsL  260 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAI  260 (405)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHH
Confidence            665 5566654322    2589999995433333333  78999999999877653

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.62  E-value=1.4e-16  Score=129.43  Aligned_cols=137  Identities=11%  Similarity=0.030  Sum_probs=100.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC-------eEEEeecCCCCc-cc----ccCCCCeEEEEccCCCHHHHHHHhcCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRSS-LR----DSWANNVIWHQGNLLSSDSWKEALDGVT  123 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~-------~V~~l~r~~~~~-~~----~~~~~~~~~~~~D~~d~~~~~~~~~~~d  123 (198)
                      +++|+||||+||||++++..|+.+|+       +|+++++..... ..    ......+.++ +|+.+.+++.++++++|
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~~~D   82 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFKDAD   82 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhCCCC
Confidence            46899999999999999999999986       899998863110 00    0011112233 57777667788899999


Q ss_pred             EEEEccccCCC----CccceehhhHHHHHHHHHHHHcC-CC-EEEEeeccc----c---C-C-CCCCcchHHHHHHHHHH
Q 029125          124 AVISCVGGFGS----NSYMYKINGTANINAIRAASEKG-VK-RFVYISAAD----F---G-V-ANYLLQGYYEGKRAAET  188 (198)
Q Consensus       124 ~vi~~ag~~~~----~~~~~~~n~~~~~~~~~a~~~~~-~~-~~v~~Ss~~----~---~-~-~~~~~~~Y~~sK~~~e~  188 (198)
                      +|||+||....    ....+++|+.++.++++++.+.+ ++ +|+++|+..    +   . . +.++...|+.+|...|+
T Consensus        83 ~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~tkl~~er  162 (327)
T 1y7t_A           83 YALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNR  162 (327)
T ss_dssp             EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHH
T ss_pred             EEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccchHHHHH
Confidence            99999996542    24567899999999999999886 65 788887732    1   1 1 23456789999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      ++...
T Consensus       163 ~~~~~  167 (327)
T 1y7t_A          163 AKAQL  167 (327)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77643

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.61  E-value=9.1e-16  Score=134.01  Aligned_cols=139  Identities=15%  Similarity=0.081  Sum_probs=96.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC--------Cccc----ccCCCCeEEEEccCCCHHHHHHH---
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR--------SSLR----DSWANNVIWHQGNLLSSDSWKEA---  118 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~--------~~~~----~~~~~~~~~~~~D~~d~~~~~~~---  118 (198)
                      .++|+++||||+++||+++++.|+++|++|++.+|+..        ...+    .....+... .+|+.|.++++++   
T Consensus         6 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~-~~d~~d~~~~~~~v~~   84 (604)
T 2et6_A            6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA-VADYNNVLDGDKIVET   84 (604)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE-EEECCCTTCHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE-EEEcCCHHHHHHHHHH
Confidence            45789999999999999999999999999999987641        1000    000011122 2466665333322   


Q ss_pred             ----hcCCCEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHH
Q 029125          119 ----LDGVTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYY  180 (198)
Q Consensus       119 ----~~~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~  180 (198)
                          +.++|++|||||...          .|+..+++|+.|++.+.+++.    +.+.++||++||...-.+.+....|+
T Consensus        85 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~  164 (604)
T 2et6_A           85 AVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYA  164 (604)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHH
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCchHHH
Confidence                347999999999642          245678999999998888763    44567999999954333445567899


Q ss_pred             HHHHHHHHHHHhh
Q 029125          181 EGKRAAETELLTR  193 (198)
Q Consensus       181 ~sK~~~e~~l~~~  193 (198)
                      +||++.+.+.+..
T Consensus       165 asKaal~~lt~~l  177 (604)
T 2et6_A          165 SAKSALLGFAETL  177 (604)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999877653

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.60  E-value=1.6e-15  Score=136.07  Aligned_cols=138  Identities=17%  Similarity=0.264  Sum_probs=108.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHH-HCCC-eEEEeecCCCCccc--------ccCCCCeEEEEccCCCHHHHHHHhc---
Q 029125           54 PPSEKLLVLGGNGFVGSHICREAL-DRGL-TVASLSRSGRSSLR--------DSWANNVIWHQGNLLSSDSWKEALD---  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~-~~g~-~V~~l~r~~~~~~~--------~~~~~~~~~~~~D~~d~~~~~~~~~---  120 (198)
                      ..+++++||||+|+||+++++.|+ ++|+ +|++++|+......        .....++.++.+|++|.+++.++++   
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~  607 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP  607 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            457899999999999999999999 7898 58999997432111        1124568999999999999998876   


Q ss_pred             ---CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          121 ---GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       121 ---~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                         .+|+||||||...          .|+..+++|+.|++++.+++.. .. +||++||...-.+.+....|+++|...+
T Consensus       608 ~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~l-~iV~~SS~ag~~g~~g~~~YaAaka~~~  685 (795)
T 3slk_A          608 DEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-DV-ALVLFSSVSGVLGSGGQGNYAAANSFLD  685 (795)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-TS-EEEEEEETHHHHTCSSCHHHHHHHHHHH
T ss_pred             HhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-CC-EEEEEccHHhcCCCCCCHHHHHHHHHHH
Confidence               3699999999653          2355689999999999998843 33 8999999654445566789999999998


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+.++.
T Consensus       686 alA~~~  691 (795)
T 3slk_A          686 ALAQQR  691 (795)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887754

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.60  E-value=4.2e-15  Score=123.70  Aligned_cols=139  Identities=14%  Similarity=0.021  Sum_probs=98.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHH-CCCeEEEeecCCCCccc-----------------ccCCCCeEEEEccCCCHHHHH
Q 029125           55 PSEKLLVLGGNGFVGSHICREALD-RGLTVASLSRSGRSSLR-----------------DSWANNVIWHQGNLLSSDSWK  116 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~-~g~~V~~l~r~~~~~~~-----------------~~~~~~~~~~~~D~~d~~~~~  116 (198)
                      .+|+++||||+++||.++++.|++ +|++|++++|+......                 ......+..+.+|++|++++.
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            478999999999999999999999 99999999987554221                 112346788999999998776


Q ss_pred             HHh--------cCCCEEEEccccC---------------CC-----------------------------CccceehhhH
Q 029125          117 EAL--------DGVTAVISCVGGF---------------GS-----------------------------NSYMYKINGT  144 (198)
Q Consensus       117 ~~~--------~~~d~vi~~ag~~---------------~~-----------------------------~~~~~~~n~~  144 (198)
                      +++        .++|++|||||..               ..                             |+..+++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            554        3589999999852               00                             1122345555


Q ss_pred             HHH-HHHHHHHHcC----CCEEEEeeccccCCCCCCc--chHHHHHHHHHHHHHhh
Q 029125          145 ANI-NAIRAASEKG----VKRFVYISAADFGVANYLL--QGYYEGKRAAETELLTR  193 (198)
Q Consensus       145 ~~~-~~~~a~~~~~----~~~~v~~Ss~~~~~~~~~~--~~Y~~sK~~~e~~l~~~  193 (198)
                      +.+ .+++++....    -.+||++||.....+.+..  ..|++||++.+.+.+..
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsL  275 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRL  275 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHH
Confidence            554 5566654432    2489999995432222323  78999999999877653

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.59  E-value=1.2e-15  Score=123.34  Aligned_cols=140  Identities=11%  Similarity=-0.051  Sum_probs=83.0

Q ss_pred             CCCCeEEEEcC--CchhHHHHHHHHHHCCCeEEEeecCC---------C-Ccccc--------------cC-CC-----C
Q 029125           54 PPSEKLLVLGG--NGFVGSHICREALDRGLTVASLSRSG---------R-SSLRD--------------SW-AN-----N  101 (198)
Q Consensus        54 ~~~~~vlvtGa--tG~iG~~l~~~l~~~g~~V~~l~r~~---------~-~~~~~--------------~~-~~-----~  101 (198)
                      .++|+++||||  +++||++++++|+++|++|++++|++         . .....              .. ..     .
T Consensus         7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (319)
T 2ptg_A            7 LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVF   86 (319)
T ss_dssp             CTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CC
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccc
Confidence            35689999999  89999999999999999999998641         0 00000              00 00     0


Q ss_pred             eEEEEccC------------CC--------HHHHHHHh-------cCCCEEEEccccCC------------CCccceehh
Q 029125          102 VIWHQGNL------------LS--------SDSWKEAL-------DGVTAVISCVGGFG------------SNSYMYKIN  142 (198)
Q Consensus       102 ~~~~~~D~------------~d--------~~~~~~~~-------~~~d~vi~~ag~~~------------~~~~~~~~n  142 (198)
                      ..++.+|+            +|        .+++.+++       .++|+||||||...            .|+..+++|
T Consensus        87 ~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN  166 (319)
T 2ptg_A           87 DKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSS  166 (319)
T ss_dssp             SEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHH
T ss_pred             cccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHh
Confidence            24455443            22        22344433       36899999998531            123567899


Q ss_pred             hHHHHHHHHHHHHcC--CCEEEEeeccccCCCCCCc-chHHHHHHHHHHHHHhh
Q 029125          143 GTANINAIRAASEKG--VKRFVYISAADFGVANYLL-QGYYEGKRAAETELLTR  193 (198)
Q Consensus       143 ~~~~~~~~~a~~~~~--~~~~v~~Ss~~~~~~~~~~-~~Y~~sK~~~e~~l~~~  193 (198)
                      +.+++++++++...-  .++||++||.....+.+.. ..|+.+|++.+.+.+..
T Consensus       167 ~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~l  220 (319)
T 2ptg_A          167 SYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTL  220 (319)
T ss_dssp             THHHHHHHHHHGGGEEEEEEEEEEEECC------------------THHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhcCceEEEEeccccccccCccchhhHHHHHHHHHHHHHH
Confidence            999999999986541  2689999995432333333 58999999999887653

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.57  E-value=9.1e-15  Score=135.44  Aligned_cols=136  Identities=14%  Similarity=0.075  Sum_probs=101.4

Q ss_pred             CCCCeEEEEcCCch-hHHHHHHHHHHCCCeEEEee-cCCCCccc------cc---CCCCeEEEEccCCCHHHHHHHhc--
Q 029125           54 PPSEKLLVLGGNGF-VGSHICREALDRGLTVASLS-RSGRSSLR------DS---WANNVIWHQGNLLSSDSWKEALD--  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~-iG~~l~~~l~~~g~~V~~l~-r~~~~~~~------~~---~~~~~~~~~~D~~d~~~~~~~~~--  120 (198)
                      .++|+++||||+|+ ||.++++.|+++|++|++++ |+......      ..   ...++.++.+|++|.+++.++++  
T Consensus       474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I  553 (1688)
T 2pff_A          474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  553 (1688)
T ss_dssp             CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence            45689999999998 99999999999999999984 54432111      01   12357899999999988887653  


Q ss_pred             -----------CCCEEEEccccCCC-------------CccceehhhHHHHHHHHHHHH--c----CCCEEEEeeccccC
Q 029125          121 -----------GVTAVISCVGGFGS-------------NSYMYKINGTANINAIRAASE--K----GVKRFVYISAADFG  170 (198)
Q Consensus       121 -----------~~d~vi~~ag~~~~-------------~~~~~~~n~~~~~~~~~a~~~--~----~~~~~v~~Ss~~~~  170 (198)
                                 ++|+||||||....             +...+++|+.+++.+++++..  .    +.++||++||...-
T Consensus       554 ~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~  633 (1688)
T 2pff_A          554 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT  633 (1688)
T ss_dssp             HSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTT
T ss_pred             HHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhc
Confidence                       48999999995421             134578999999988888732  1    22589999994322


Q ss_pred             CCCCCcchHHHHHHHHHHHHH
Q 029125          171 VANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       171 ~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      .+  ....|++||++.+.++.
T Consensus       634 ~G--g~saYaASKAAL~aLtt  652 (1688)
T 2pff_A          634 FG--GDGMYSESKLSLETLFN  652 (1688)
T ss_dssp             SS--CBTTHHHHHHHHTHHHH
T ss_pred             cC--CchHHHHHHHHHHHHHH
Confidence            22  45789999999999843

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.57  E-value=2e-14  Score=120.04  Aligned_cols=140  Identities=9%  Similarity=-0.041  Sum_probs=99.0

Q ss_pred             CCCCeEEEEcCCchhHHH--HHHHHHHCCCeEEEeecCCCCcc-----------c------ccCCCCeEEEEccCCCHHH
Q 029125           54 PPSEKLLVLGGNGFVGSH--ICREALDRGLTVASLSRSGRSSL-----------R------DSWANNVIWHQGNLLSSDS  114 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~--l~~~l~~~g~~V~~l~r~~~~~~-----------~------~~~~~~~~~~~~D~~d~~~  114 (198)
                      ..+|+++||||+++||.+  ++..|+++|++|++++|+.....           .      ......+..+.+|++|.++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            568899999999999999  99999999999999998754321           0      1123468899999999988


Q ss_pred             HHHHhc-------CCCEEEEccccC---------------CC-----------------------------Cccceehhh
Q 029125          115 WKEALD-------GVTAVISCVGGF---------------GS-----------------------------NSYMYKING  143 (198)
Q Consensus       115 ~~~~~~-------~~d~vi~~ag~~---------------~~-----------------------------~~~~~~~n~  143 (198)
                      +.++++       ++|++|||||..               ..                             ++..+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            877664       589999999863               00                             011234444


Q ss_pred             HHHH-HHHHHHHHcC----CCEEEEeeccccCCCCCCc--chHHHHHHHHHHHHHhh
Q 029125          144 TANI-NAIRAASEKG----VKRFVYISAADFGVANYLL--QGYYEGKRAAETELLTR  193 (198)
Q Consensus       144 ~~~~-~~~~a~~~~~----~~~~v~~Ss~~~~~~~~~~--~~Y~~sK~~~e~~l~~~  193 (198)
                      .+.. .+++++....    -.++|++||.....+.+..  ..|+++|++.+.+.+..
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsL  274 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLI  274 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHH
Confidence            4444 4555554432    2479999985433333444  78999999999877653

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.56  E-value=2.7e-14  Score=135.46  Aligned_cols=134  Identities=14%  Similarity=0.084  Sum_probs=101.2

Q ss_pred             CCCCeEEEEcCCch-hHHHHHHHHHHCCCeEEEee-cCCCCccc------c---cCCCCeEEEEccCCCHHHHHHHhc--
Q 029125           54 PPSEKLLVLGGNGF-VGSHICREALDRGLTVASLS-RSGRSSLR------D---SWANNVIWHQGNLLSSDSWKEALD--  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~-iG~~l~~~l~~~g~~V~~l~-r~~~~~~~------~---~~~~~~~~~~~D~~d~~~~~~~~~--  120 (198)
                      .++++++||||+++ ||.++++.|+++|++|++++ |+......      .   ....++.++.+|++|.+++.++++  
T Consensus       673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i  752 (1887)
T 2uv8_A          673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  752 (1887)
T ss_dssp             CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHH
Confidence            45789999999998 99999999999999999985 54332100      0   013468899999999998887653  


Q ss_pred             -----------CCCEEEEccccCCC-------------CccceehhhHHHHHHHHHHHHcC------CCEEEEeeccccC
Q 029125          121 -----------GVTAVISCVGGFGS-------------NSYMYKINGTANINAIRAASEKG------VKRFVYISAADFG  170 (198)
Q Consensus       121 -----------~~d~vi~~ag~~~~-------------~~~~~~~n~~~~~~~~~a~~~~~------~~~~v~~Ss~~~~  170 (198)
                                 ++|+||||||....             +...+++|+.+++.+++++....      .++||++||...-
T Consensus       753 ~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~  832 (1887)
T 2uv8_A          753 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT  832 (1887)
T ss_dssp             HSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTC
T ss_pred             HHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhc
Confidence                       48999999996422             13457899999999988874321      2589999995322


Q ss_pred             CCCCCcchHHHHHHHHHHH
Q 029125          171 VANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       171 ~~~~~~~~Y~~sK~~~e~~  189 (198)
                      .+  ....|+.+|++.+.+
T Consensus       833 ~g--g~~aYaASKAAL~~L  849 (1887)
T 2uv8_A          833 FG--GDGMYSESKLSLETL  849 (1887)
T ss_dssp             SS--CBTTHHHHHHHGGGH
T ss_pred             cC--CCchHHHHHHHHHHH
Confidence            22  456899999999988

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.56  E-value=1.5e-14  Score=136.94  Aligned_cols=137  Identities=14%  Similarity=0.059  Sum_probs=101.4

Q ss_pred             CCCCeEEEEcCCch-hHHHHHHHHHHCCCeEEEeecCCCCccc-------c---cCCCCeEEEEccCCCHHHHHHHhc--
Q 029125           54 PPSEKLLVLGGNGF-VGSHICREALDRGLTVASLSRSGRSSLR-------D---SWANNVIWHQGNLLSSDSWKEALD--  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~-iG~~l~~~l~~~g~~V~~l~r~~~~~~~-------~---~~~~~~~~~~~D~~d~~~~~~~~~--  120 (198)
                      .++++++||||+|+ ||.++++.|+++|++|++++++......       .   ....++.++.+|++|.+++.++++  
T Consensus       650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i  729 (1878)
T 2uv9_A          650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYI  729 (1878)
T ss_dssp             CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            45789999999999 9999999999999999999644322110       0   113468899999999999887763  


Q ss_pred             ---------CCCEEEEccccCCC-------------CccceehhhHHHHHHHHHHH--Hc----CCCEEEEeeccccCCC
Q 029125          121 ---------GVTAVISCVGGFGS-------------NSYMYKINGTANINAIRAAS--EK----GVKRFVYISAADFGVA  172 (198)
Q Consensus       121 ---------~~d~vi~~ag~~~~-------------~~~~~~~n~~~~~~~~~a~~--~~----~~~~~v~~Ss~~~~~~  172 (198)
                               .+|+||||||....             +...+++|+.++++++++++  ..    +.++||++||...-.+
T Consensus       730 ~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g  809 (1878)
T 2uv9_A          730 YDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG  809 (1878)
T ss_dssp             HCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS
T ss_pred             HHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC
Confidence                     48999999996422             13457899999998887642  21    2358999999432222


Q ss_pred             CCCcchHHHHHHHHHHHHHh
Q 029125          173 NYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       173 ~~~~~~Y~~sK~~~e~~l~~  192 (198)
                        ....|+.+|++.+.+++.
T Consensus       810 --g~~aYaASKAAL~aLt~~  827 (1878)
T 2uv9_A          810 --NDGLYSESKLALETLFNR  827 (1878)
T ss_dssp             --CCSSHHHHHHHHTTHHHH
T ss_pred             --CchHHHHHHHHHHHHHHH
Confidence              356899999999988653

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.52  E-value=6.5e-14  Score=137.66  Aligned_cols=138  Identities=22%  Similarity=0.159  Sum_probs=106.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCe-EEEeecCCCCcc--c------ccCCCCeEEEEccCCCHHHHHHHhc----
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLT-VASLSRSGRSSL--R------DSWANNVIWHQGNLLSSDSWKEALD----  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~-V~~l~r~~~~~~--~------~~~~~~~~~~~~D~~d~~~~~~~~~----  120 (198)
                      ..+++++||||+|+||.++++.|+++|++ |++++|+..+..  .      .....++.++.+|++|.+++.++++    
T Consensus      1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 1961 (2512)
T 2vz8_A         1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ 1961 (2512)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh
Confidence            35789999999999999999999999997 778888754321  0      1123467889999999998887664    


Q ss_pred             --CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          121 --GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 --~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                        .+|+||||||...          .|+..+++|+.|++++.+++...  ..++||++||.....+.+....|+++|.+.
T Consensus      1962 ~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~~~Y~aaKaal 2041 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQANYGFANSAM 2041 (2512)
T ss_dssp             HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTCHHHHHHHHHH
T ss_pred             cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCcHHHHHHHHHH
Confidence              5899999999532          45677899999999998887653  346999999954434455677899999999


Q ss_pred             HHHHH
Q 029125          187 ETELL  191 (198)
Q Consensus       187 e~~l~  191 (198)
                      +.+.+
T Consensus      2042 ~~l~~ 2046 (2512)
T 2vz8_A         2042 ERICE 2046 (2512)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99988

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.45  E-value=3.4e-13  Score=92.82  Aligned_cols=96  Identities=21%  Similarity=0.135  Sum_probs=77.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~  133 (198)
                      .+++|+|+|+ |++|+.+++.|++.| ++|++++|++.+... ....++.++.+|+.+.+.+.++++++|+|||+++.. 
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~-   80 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAV-LNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFF-   80 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHH-HHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGG-
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHH-HHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCch-
Confidence            4679999999 999999999999999 999999997644221 113567889999999999999999999999999632 


Q ss_pred             CCccceehhhHHHHHHHHHHHHcCCCEEEEe
Q 029125          134 SNSYMYKINGTANINAIRAASEKGVKRFVYI  164 (198)
Q Consensus       134 ~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~  164 (198)
                                 ....+++++.+.++++|.+.
T Consensus        81 -----------~~~~~~~~~~~~g~~~~~~~  100 (118)
T 3ic5_A           81 -----------LTPIIAKAAKAAGAHYFDLT  100 (118)
T ss_dssp             -----------GHHHHHHHHHHTTCEEECCC
T ss_pred             -----------hhHHHHHHHHHhCCCEEEec
Confidence                       23577888988888655443

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.27  E-value=1.8e-11  Score=121.07  Aligned_cols=139  Identities=15%  Similarity=0.104  Sum_probs=97.4

Q ss_pred             CCCCeEEEEcCCch-hHHHHHHHHHHCCCeEEEeecCCCCc----cc------ccCCCCeEEEEccCCCHHHHHHHhc--
Q 029125           54 PPSEKLLVLGGNGF-VGSHICREALDRGLTVASLSRSGRSS----LR------DSWANNVIWHQGNLLSSDSWKEALD--  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~-iG~~l~~~l~~~g~~V~~l~r~~~~~----~~------~~~~~~~~~~~~D~~d~~~~~~~~~--  120 (198)
                      .++|+++||||+++ ||.++++.|+++|++|++++|+....    .+      ......+..+.+|++|+++++++++  
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            57899999999999 99999999999999999999986541    00      1112357889999999998887642  


Q ss_pred             ---------CCCEEEEcccc----C-----------CCCccc----eehhhHHHHHHHHHHHH----cCCC---EEEEee
Q 029125          121 ---------GVTAVISCVGG----F-----------GSNSYM----YKINGTANINAIRAASE----KGVK---RFVYIS  165 (198)
Q Consensus       121 ---------~~d~vi~~ag~----~-----------~~~~~~----~~~n~~~~~~~~~a~~~----~~~~---~~v~~S  165 (198)
                               ++|++|||||.    .           ..|+..    +++|+.+++.+++.+..    .+..   .++...
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ 2293 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPG 2293 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEE
T ss_pred             HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEC
Confidence                     47999999996    1           013333    67888888877777643    2321   233332


Q ss_pred             ccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          166 AADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       166 s~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      |...+. ......|++||++.+.+.+..
T Consensus      2294 ss~~g~-~g~~~aYsASKaAl~~Ltrsl 2320 (3089)
T 3zen_D         2294 SPNRGM-FGGDGAYGEAKSALDALENRW 2320 (3089)
T ss_dssp             CSSTTS-CSSCSSHHHHGGGHHHHHHHH
T ss_pred             Cccccc-CCCchHHHHHHHHHHHHHHHH
Confidence            322221 123457999999999887754

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.17  E-value=5.6e-11  Score=96.44  Aligned_cols=110  Identities=15%  Similarity=0.197  Sum_probs=80.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCccc---ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      ++++|+||||+|++|..++..|+.+|  ++|+++++++.....   ........+ .+ +.+.+++.++++++|+|||++
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v-~~-~~~t~d~~~al~gaDvVi~~a   84 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVV-RG-FLGQQQLEAALTGMDLIIVPA   84 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEE-EE-EESHHHHHHHHTTCSEEEECC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceE-EE-EeCCCCHHHHcCCCCEEEEcC
Confidence            35699999999999999999999998  799999976541100   000111111 11 234567888899999999999


Q ss_pred             ccCCC----CccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          130 GGFGS----NSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       130 g~~~~----~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      |....    ....+..|+.++.++++++.+.+++.+++++|
T Consensus        85 g~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S  125 (326)
T 1smk_A           85 GVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS  125 (326)
T ss_dssp             CCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             CcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            96432    24567899999999999999988887777776

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.08  E-value=8.8e-11  Score=93.54  Aligned_cols=78  Identities=23%  Similarity=0.166  Sum_probs=63.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccC--CCCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSW--ANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~--~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      .++++++||||+|++|++++..|+++|++|++++|+..+...  ...  ..++.++.+|++|.+++.++++++|+||||+
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~a  196 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG  196 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECC
Confidence            467899999999999999999999999999999997543111  000  0246778899999999999999999999999


Q ss_pred             cc
Q 029125          130 GG  131 (198)
Q Consensus       130 g~  131 (198)
                      |.
T Consensus       197 g~  198 (287)
T 1lu9_A          197 AI  198 (287)
T ss_dssp             CT
T ss_pred             Cc
Confidence            74

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.06  E-value=8.1e-11  Score=95.59  Aligned_cols=110  Identities=6%  Similarity=-0.003  Sum_probs=80.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC-------eEEEeecC----CCCccc---ccCCCCeEEEEccCCCHHHHHHHhcC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL-------TVASLSRS----GRSSLR---DSWANNVIWHQGNLLSSDSWKEALDG  121 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~-------~V~~l~r~----~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~  121 (198)
                      +++|+||||+|++|.+++..|+.+|.       +|.++++.    ..+...   ........+ ..|+....++.+++++
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al~~   83 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTAFKD   83 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHTTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHHhCC
Confidence            46999999999999999999999885       79998886    221100   000110111 2355555567888999


Q ss_pred             CCEEEEccccCCCC----ccceehhhHHHHHHHHHHHHcC-CC-EEEEeec
Q 029125          122 VTAVISCVGGFGSN----SYMYKINGTANINAIRAASEKG-VK-RFVYISA  166 (198)
Q Consensus       122 ~d~vi~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~-~~-~~v~~Ss  166 (198)
                      +|+|||+||....+    ...+..|+..+.++++++.+.+ .+ +||++|.
T Consensus        84 aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN  134 (329)
T 1b8p_A           84 ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN  134 (329)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence            99999999965432    3456799999999999999884 66 8899887

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=99.03  E-value=2.3e-09  Score=75.85  Aligned_cols=100  Identities=13%  Similarity=0.085  Sum_probs=73.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEccccCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVGGFG  133 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag~~~  133 (198)
                      ++++|+|+|+ |.+|..+++.|.+.|++|+++++++.... .....+..++.+|..|.+.+.++ ++++|+||++++.. 
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~-~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~-   81 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVN-AYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN-   81 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHH-TTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC-
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc-
Confidence            4678999998 99999999999999999999998754321 11123457788999998888776 77899999988741 


Q ss_pred             CCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          134 SNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       134 ~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                           .+.|    ..+.+.+++.++++++..++
T Consensus        82 -----~~~~----~~~~~~~~~~~~~~ii~~~~  105 (144)
T 2hmt_A           82 -----IQAS----TLTTLLLKELDIPNIWVKAQ  105 (144)
T ss_dssp             -----HHHH----HHHHHHHHHTTCSEEEEECC
T ss_pred             -----hHHH----HHHHHHHHHcCCCeEEEEeC
Confidence                 0122    24566677778777776655

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.98  E-value=1.3e-08  Score=83.70  Aligned_cols=79  Identities=14%  Similarity=0.100  Sum_probs=62.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHH-HCCCeEEEeecCCCCccc-----------------ccCCCCeEEEEccCCCHHHH
Q 029125           54 PPSEKLLVLGGNGFVGSHICREAL-DRGLTVASLSRSGRSSLR-----------------DSWANNVIWHQGNLLSSDSW  115 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~-~~g~~V~~l~r~~~~~~~-----------------~~~~~~~~~~~~D~~d~~~~  115 (198)
                      ..+|++|||||++++|.+.+..|+ ..|..|+++.+.......                 .........+.+|+.|++.+
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i  127 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK  127 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence            457899999999999999999998 679999998886543211                 11235678999999999888


Q ss_pred             HHHhc-------CCCEEEEccccC
Q 029125          116 KEALD-------GVTAVISCVGGF  132 (198)
Q Consensus       116 ~~~~~-------~~d~vi~~ag~~  132 (198)
                      +++++       ++|+|||+++..
T Consensus       128 ~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          128 AQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHhcCCCCEEEEecccc
Confidence            87765       589999999853

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.96  E-value=1.2e-09  Score=88.02  Aligned_cols=105  Identities=16%  Similarity=0.103  Sum_probs=74.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCC--eEEEeec--CCCCcc------cc--cCC-CCeEEEEccCCCHHHHHHHhcCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGL--TVASLSR--SGRSSL------RD--SWA-NNVIWHQGNLLSSDSWKEALDGVT  123 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r--~~~~~~------~~--~~~-~~~~~~~~D~~d~~~~~~~~~~~d  123 (198)
                      ++|+||||+|++|++++..|+.+|.  ++.++++  +..+..      ..  ... ..+.+...+    +++.++++++|
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~gaD   76 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIIDESD   76 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGTTCS
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhCCCC
Confidence            4899999999999999999998884  6888887  432110      00  011 122322211    23566789999


Q ss_pred             EEEEccccCCCC----ccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          124 AVISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       124 ~vi~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      +|||+||....+    ...+..|+.++.++++++.+.+ +++++++|
T Consensus        77 ~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~S  122 (313)
T 1hye_A           77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVIT  122 (313)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECS
T ss_pred             EEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEec
Confidence            999999965432    3467899999999999999988 87777776

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.94  E-value=3e-09  Score=89.78  Aligned_cols=103  Identities=17%  Similarity=0.146  Sum_probs=75.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc-cCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-SWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS  134 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~  134 (198)
                      +++|+|+| +|++|+++++.|++.|++|++++|+..+.... ....++..+.+|+.|.+++.++++++|+|||+++....
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~   81 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFH   81 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--CH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccccc
Confidence            57899998 79999999999999999999999975432111 11134778899999999999999999999999986321


Q ss_pred             C----------ccceeh--hhHHHHHHHHHHHHcCCC
Q 029125          135 N----------SYMYKI--NGTANINAIRAASEKGVK  159 (198)
Q Consensus       135 ~----------~~~~~~--n~~~~~~~~~a~~~~~~~  159 (198)
                      .          ...+..  ......++++++++.|+.
T Consensus        82 ~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~  118 (450)
T 1ff9_A           82 ATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT  118 (450)
T ss_dssp             HHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE
T ss_pred             hHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe
Confidence            1          111111  123567888999988873

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.90  E-value=6.1e-10  Score=89.42  Aligned_cols=103  Identities=16%  Similarity=0.122  Sum_probs=74.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCC--eEEEeec--CCCCccc------c--cCCCCeEEEEccCCCHHHHHHHhcCCCE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGL--TVASLSR--SGRSSLR------D--SWANNVIWHQGNLLSSDSWKEALDGVTA  124 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r--~~~~~~~------~--~~~~~~~~~~~D~~d~~~~~~~~~~~d~  124 (198)
                      ++|+||||+|++|..++..|+.+|.  ++.++++  ++.+...      .  ....++.+.. +  +    .++++++|+
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv   73 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSDV   73 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCCE
Confidence            4899999999999999999998875  6888887  4321100      0  0112333332 1  1    345889999


Q ss_pred             EEEccccCCCC----ccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          125 VISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       125 vi~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      |||++|....+    ...+..|+.++.++++++.+.+.+.+++++|
T Consensus        74 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S  119 (303)
T 1o6z_A           74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (303)
T ss_dssp             EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            99999965432    3467899999999999999998888887776

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.89  E-value=1.2e-08  Score=71.81  Aligned_cols=99  Identities=13%  Similarity=0.214  Sum_probs=70.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEccccCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVGGFGS  134 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag~~~~  134 (198)
                      +++|+|+|+ |.+|..+++.|.+.|++|++++|++..........++.++.+|..+.+.+.+. ++++|+||++.+..  
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~--   80 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE--   80 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH--
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCc--
Confidence            468999997 99999999999999999999998754321111112567888999988877765 67899999987531  


Q ss_pred             CccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          135 NSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       135 ~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                           ..|    ..+.+.++..+.++++..++
T Consensus        81 -----~~~----~~~~~~~~~~~~~~ii~~~~  103 (140)
T 1lss_A           81 -----EVN----LMSSLLAKSYGINKTIARIS  103 (140)
T ss_dssp             -----HHH----HHHHHHHHHTTCCCEEEECS
T ss_pred             -----hHH----HHHHHHHHHcCCCEEEEEec
Confidence                 122    24455666677677776544

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.86  E-value=1.3e-08  Score=72.15  Aligned_cols=98  Identities=15%  Similarity=0.113  Sum_probs=70.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEccccCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVGGFG  133 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag~~~  133 (198)
                      ++++|+|+|+ |.+|+++++.|.++|++|+++++++..... ....++.++.+|.+|++.+.++ ++++|+||.+.+.. 
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~-~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~-   81 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIEL-LEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDD-   81 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHH-HHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCH-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHH-HHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCH-
Confidence            4678999998 999999999999999999999997644211 1124678899999999988876 46799999877621 


Q ss_pred             CCccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          134 SNSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       134 ~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                                .....+...+++.+..+++...
T Consensus        82 ----------~~n~~~~~~a~~~~~~~iia~~  103 (141)
T 3llv_A           82 ----------EFNLKILKALRSVSDVYAIVRV  103 (141)
T ss_dssp             ----------HHHHHHHHHHHHHCCCCEEEEE
T ss_pred             ----------HHHHHHHHHHHHhCCceEEEEE
Confidence                      1223345556665644554433

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.85  E-value=5.2e-09  Score=87.20  Aligned_cols=91  Identities=15%  Similarity=0.146  Sum_probs=69.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC---CeEEEeecCCCCccc--cc----CCCCeEEEEccCCCHHHHHHHhcC--CCE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLR--DS----WANNVIWHQGNLLSSDSWKEALDG--VTA  124 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g---~~V~~l~r~~~~~~~--~~----~~~~~~~~~~D~~d~~~~~~~~~~--~d~  124 (198)
                      |++|+|+|| |++|+.+++.|++.|   .+|++.+|+..+...  ..    ...++..+.+|+.|.+++.+++++  +|+
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv   79 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI   79 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence            578999999 999999999999998   389999998654211  11    113588999999999999999987  999


Q ss_pred             EEEccccCCCCccceehhhHHHHHHHHHHHHcCCC
Q 029125          125 VISCVGGFGSNSYMYKINGTANINAIRAASEKGVK  159 (198)
Q Consensus       125 vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~  159 (198)
                      |||++++..            ...++++|.+.++.
T Consensus        80 Vin~ag~~~------------~~~v~~a~l~~g~~  102 (405)
T 4ina_A           80 VLNIALPYQ------------DLTIMEACLRTGVP  102 (405)
T ss_dssp             EEECSCGGG------------HHHHHHHHHHHTCC
T ss_pred             EEECCCccc------------ChHHHHHHHHhCCC
Confidence            999998531            13456666666653

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.82  E-value=1.8e-08  Score=82.77  Aligned_cols=95  Identities=22%  Similarity=0.227  Sum_probs=70.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~  133 (198)
                      .++|||+|.|| |++|+.+++.|.+ .++|.+.+++..+...  ....+..+.+|+.|.+++.+++++.|+||+++++.-
T Consensus        14 g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~--~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~   89 (365)
T 3abi_A           14 GRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEK--VKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFL   89 (365)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHH--HTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGG
T ss_pred             CCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHH--HhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCcc
Confidence            45678999998 9999999988865 5899999987543211  134567889999999999999999999999987631


Q ss_pred             CCccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          134 SNSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       134 ~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                                  ...++++|.+.|+ +++=+|
T Consensus        90 ------------~~~v~~~~~~~g~-~yvD~s  108 (365)
T 3abi_A           90 ------------GFKSIKAAIKSKV-DMVDVS  108 (365)
T ss_dssp             ------------HHHHHHHHHHHTC-EEEECC
T ss_pred             ------------cchHHHHHHhcCc-ceEeee
Confidence                        1356677777665 454443

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.81  E-value=5.6e-09  Score=88.47  Aligned_cols=104  Identities=13%  Similarity=0.082  Sum_probs=75.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHC-CCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      .++++|+|+|+ |++|+.++..|++. |++|++++|+..+........++..+.+|+.|.+++.++++++|+|||+++..
T Consensus        21 l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~   99 (467)
T 2axq_A           21 HMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYT   99 (467)
T ss_dssp             --CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGG
T ss_pred             CCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchh
Confidence            45789999997 99999999999998 78999999975442111111356778899999999999999999999999854


Q ss_pred             CC----------Cccceehhh--HHHHHHHHHHHHcCC
Q 029125          133 GS----------NSYMYKING--TANINAIRAASEKGV  158 (198)
Q Consensus       133 ~~----------~~~~~~~n~--~~~~~~~~a~~~~~~  158 (198)
                      ..          ....+.+++  .....+++.+++.|+
T Consensus       100 ~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv  137 (467)
T 2axq_A          100 FHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGI  137 (467)
T ss_dssp             GHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTC
T ss_pred             hhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCC
Confidence            21          112233332  334577788888776

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.79  E-value=1.9e-07  Score=67.24  Aligned_cols=101  Identities=17%  Similarity=0.134  Sum_probs=72.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEccccC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVGGF  132 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag~~  132 (198)
                      ..+++|+|+|+ |.+|..+++.|.+.|++|++++|++..........+..++.+|..+.+.+.++ ++++|+||.+.+..
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~   95 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDD   95 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCH
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCc
Confidence            34679999996 99999999999999999999999865432211134567888999888877765 67899999987631


Q ss_pred             CCCccceehhhHHHHHHHHHHHH-cCCCEEEEeec
Q 029125          133 GSNSYMYKINGTANINAIRAASE-KGVKRFVYISA  166 (198)
Q Consensus       133 ~~~~~~~~~n~~~~~~~~~a~~~-~~~~~~v~~Ss  166 (198)
                                 .....+.+.++. .+..+++...+
T Consensus        96 -----------~~~~~~~~~~~~~~~~~~iv~~~~  119 (155)
T 2g1u_A           96 -----------STNFFISMNARYMFNVENVIARVY  119 (155)
T ss_dssp             -----------HHHHHHHHHHHHTSCCSEEEEECS
T ss_pred             -----------HHHHHHHHHHHHHCCCCeEEEEEC
Confidence                       112234555655 55666666554

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.79  E-value=3.5e-08  Score=75.87  Aligned_cols=74  Identities=18%  Similarity=0.240  Sum_probs=54.6

Q ss_pred             CCCeEEEEcC----------------CchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHH---
Q 029125           55 PSEKLLVLGG----------------NGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSW---  115 (198)
Q Consensus        55 ~~~~vlvtGa----------------tG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~---  115 (198)
                      .+|+|+||||                +|++|.++++.|+++|++|+++.|......  ..+.++.++  |+...+++   
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~--~~~~~~~~~--~v~s~~em~~~   77 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP--EPHPNLSIR--EITNTKDLLIE   77 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC--CCCTTEEEE--ECCSHHHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--cCCCCeEEE--EHhHHHHHHHH
Confidence            4689999999                899999999999999999999998753211  112355555  55554443   


Q ss_pred             -HHHhcCCCEEEEccccC
Q 029125          116 -KEALDGVTAVISCVGGF  132 (198)
Q Consensus       116 -~~~~~~~d~vi~~ag~~  132 (198)
                       .+.+.++|++||+|+..
T Consensus        78 v~~~~~~~Dili~aAAvs   95 (232)
T 2gk4_A           78 MQERVQDYQVLIHSMAVS   95 (232)
T ss_dssp             HHHHGGGCSEEEECSBCC
T ss_pred             HHHhcCCCCEEEEcCccc
Confidence             34456799999999953

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.73  E-value=7.6e-08  Score=73.78  Aligned_cols=73  Identities=18%  Similarity=0.208  Sum_probs=55.7

Q ss_pred             CCCCeEEEEcC----------------CchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHH
Q 029125           54 PPSEKLLVLGG----------------NGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE  117 (198)
Q Consensus        54 ~~~~~vlvtGa----------------tG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~  117 (198)
                      ..+++|+||||                +|++|.++++.|+++|++|+++.+.....    .+.++.  .+|+.+.+++.+
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~----~~~g~~--~~dv~~~~~~~~   79 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP----TPPFVK--RVDVMTALEMEA   79 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC----CCTTEE--EEECCSHHHHHH
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccc----cCCCCe--EEccCcHHHHHH
Confidence            46789999999                69999999999999999999998764211    123444  458888665544


Q ss_pred             H----hcCCCEEEEccccC
Q 029125          118 A----LDGVTAVISCVGGF  132 (198)
Q Consensus       118 ~----~~~~d~vi~~ag~~  132 (198)
                      .    +.++|++|||||..
T Consensus        80 ~v~~~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           80 AVNASVQQQNIFIGCAAVA   98 (226)
T ss_dssp             HHHHHGGGCSEEEECCBCC
T ss_pred             HHHHhcCCCCEEEECCccc
Confidence            3    45799999999954

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.71  E-value=4.5e-08  Score=70.45  Aligned_cols=74  Identities=19%  Similarity=0.255  Sum_probs=60.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC---cccccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS---SLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG  130 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~---~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag  130 (198)
                      .++|+|+|+ |.+|+.+++.|.+.|++|+++++++..   ........++.++.+|.+|++.+.++ ++++|.||.+.+
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence            468999996 999999999999999999999997421   11111235689999999999999887 889999999875

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.60  E-value=8.2e-08  Score=77.36  Aligned_cols=108  Identities=14%  Similarity=0.160  Sum_probs=74.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCcccccCCCCeEEEEccCCC---HHHHHHHhcCCCEEEEcccc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDSWANNVIWHQGNLLS---SDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d---~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ++|.|+||+|++|..++..|+..|  .+|.++++++.............  .+++..   .+++.++++++|+||+++|.
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~--~~~l~~~~~t~d~~~a~~~aDvVvi~ag~   78 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIET--RATVKGYLGPEQLPDCLKGCDVVVIPAGV   78 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSS--SCEEEEEESGGGHHHHHTTCSEEEECCSC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCc--CceEEEecCCCCHHHHhCCCCEEEECCCc
Confidence            489999999999999999999888  79999999762111000011100  011111   23567789999999999986


Q ss_pred             CCCC----ccceehhhHHHHHHHHHHHHcCCC-EEEEeec
Q 029125          132 FGSN----SYMYKINGTANINAIRAASEKGVK-RFVYISA  166 (198)
Q Consensus       132 ~~~~----~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~Ss  166 (198)
                      ...+    ......|......+++.+.+.+.. .|+++|.
T Consensus        79 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN  118 (314)
T 1mld_A           79 PRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN  118 (314)
T ss_dssp             CCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            5422    455678888888889988887654 6777653

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.58  E-value=1.8e-08  Score=81.81  Aligned_cols=107  Identities=12%  Similarity=0.073  Sum_probs=75.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC--e-----EEEeecCCCC-c-----cc--ccCCCCeEEEEccCCCHHHHHHHhc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL--T-----VASLSRSGRS-S-----LR--DSWANNVIWHQGNLLSSDSWKEALD  120 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~--~-----V~~l~r~~~~-~-----~~--~~~~~~~~~~~~D~~d~~~~~~~~~  120 (198)
                      +++|+||||+|++|++++..|+..|.  +     ++++++.+.. .     .+  ....+-..    ++...++..+.++
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~----~~~~~~~~~~~~~   78 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLK----DVIATDKEEIAFK   78 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEE----EEEEESCHHHHTT
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccC----CEEEcCCcHHHhC
Confidence            46899999999999999999998774  5     8999885421 0     00  00001111    2222233567789


Q ss_pred             CCCEEEEccccCC----CCccceehhhHHHHHHHHHHHHcCCC--EEEEeec
Q 029125          121 GVTAVISCVGGFG----SNSYMYKINGTANINAIRAASEKGVK--RFVYISA  166 (198)
Q Consensus       121 ~~d~vi~~ag~~~----~~~~~~~~n~~~~~~~~~a~~~~~~~--~~v~~Ss  166 (198)
                      ++|+||++||...    .....++.|......+++++.+.+.+  +++.+|.
T Consensus        79 daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           79 DLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             TCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            9999999998543    34567889999999999999998865  5777764

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.46  E-value=1.1e-06  Score=64.87  Aligned_cols=126  Identities=17%  Similarity=0.164  Sum_probs=81.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHC-CCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHH--hcCCCEEEEcccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA--LDGVTAVISCVGG  131 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~--~~~~d~vi~~ag~  131 (198)
                      .+++|+|+|+ |.+|..+++.|.+. |++|+++++++.+... ....++.++.+|.++.+.+.++  ++++|+||.+.+.
T Consensus        38 ~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~-~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~  115 (183)
T 3c85_A           38 GHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQ-HRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPH  115 (183)
T ss_dssp             TTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHH-HHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHH-HHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC
Confidence            4568999995 99999999999999 9999999997654221 1123677889999999888877  7889999987753


Q ss_pred             CCCCccceehhhHHHHHHHHHHHHcC-CCEEEEeecc-c-------cCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          132 FGSNSYMYKINGTANINAIRAASEKG-VKRFVYISAA-D-------FGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       132 ~~~~~~~~~~n~~~~~~~~~a~~~~~-~~~~v~~Ss~-~-------~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      .           .....++..+++.+ ..+++..... .       .|...-....+..++..++.++...
T Consensus       116 ~-----------~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~G~~~vi~p~~~~a~~l~~~~~~~~  175 (183)
T 3c85_A          116 H-----------QGNQTALEQLQRRNYKGQIAAIAEYPDQLEGLLESGVDAAFNIYSEAGSGFARHVCKQL  175 (183)
T ss_dssp             H-----------HHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHTCSEEEEHHHHHHHHHHHHHHHHH
T ss_pred             h-----------HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHcCCCEEEchHHHHHHHHHHHHHHhc
Confidence            1           12234455666655 3344443321 1       1111111234555666666666554

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.44  E-value=2.3e-07  Score=70.62  Aligned_cols=73  Identities=14%  Similarity=0.160  Sum_probs=59.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEccc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG  130 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag  130 (198)
                      |+|+|+|+ |.+|+++++.|.++|++|+++++++..........++.++.+|.+|++.+.++ ++++|+||.+.+
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   74 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTP   74 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence            57999997 99999999999999999999998765422111113678999999999999886 788999998765

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.38  E-value=9e-07  Score=62.67  Aligned_cols=74  Identities=19%  Similarity=0.165  Sum_probs=60.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG  130 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag  130 (198)
                      .+++|+|.|+ |.+|..+++.|.+.|++|+++++++..... ....++.++.+|.++++.+.++ ++++|+||.+.+
T Consensus         6 ~~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~-~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (140)
T 3fwz_A            6 ICNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDE-LRERGVRAVLGNAANEEIMQLAHLECAKWLILTIP   80 (140)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHH-HHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred             CCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHH-HHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence            3468999997 999999999999999999999998654211 1125778999999999988775 568999998775

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.34  E-value=3.5e-07  Score=68.32  Aligned_cols=76  Identities=26%  Similarity=0.269  Sum_probs=51.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHH---HHHHhc--CCCEEEEc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS---WKEALD--GVTAVISC  128 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~~--~~d~vi~~  128 (198)
                      ..+++|+|+||+|++|..+++.+...|++|++++|++.+..... ..+... ..|..+.+.   +.+...  ++|++|+|
T Consensus        37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~-~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~  114 (198)
T 1pqw_A           37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RLGVEY-VGDSRSVDFADEILELTDGYGVDVVLNS  114 (198)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-TTCCSE-EEETTCSTHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCE-EeeCCcHHHHHHHHHHhCCCCCeEEEEC
Confidence            35689999999999999999999999999999998754321111 112222 236665433   333332  58999999


Q ss_pred             ccc
Q 029125          129 VGG  131 (198)
Q Consensus       129 ag~  131 (198)
                      +|.
T Consensus       115 ~g~  117 (198)
T 1pqw_A          115 LAG  117 (198)
T ss_dssp             CCT
T ss_pred             Cch
Confidence            973

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.34  E-value=1.4e-06  Score=66.83  Aligned_cols=72  Identities=14%  Similarity=0.081  Sum_probs=58.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG  130 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag  130 (198)
                      ..++|+|+|+ |.+|+.+++.|.+.|+ |+++++++...... . .++.++.+|.+|++.+.++ ++++|.||.+.+
T Consensus         8 ~~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~-~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (234)
T 2aef_A            8 KSRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVL-R-SGANFVHGDPTRVSDLEKANVRGARAVIVDLE   80 (234)
T ss_dssp             --CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHH-H-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHH-h-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence            3568999998 9999999999999999 99999876542211 2 5689999999999999887 789999998764

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.19  E-value=1e-06  Score=72.41  Aligned_cols=75  Identities=20%  Similarity=0.241  Sum_probs=57.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ..+++|+|+|+ |.+|..+++.|...|++|++++|++.+...  ......   +.+|..+.+++.++++++|+||++++.
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~---~~~~~~~~~~l~~~~~~~DvVi~~~g~  239 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR---VITLTATEANIKKSVQHADLLIGAVLV  239 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS---EEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce---EEEecCCHHHHHHHHhCCCEEEECCCC
Confidence            35689999999 999999999999999999999997643211  111112   455777888898989999999999985


Q ss_pred             C
Q 029125          132 F  132 (198)
Q Consensus       132 ~  132 (198)
                      .
T Consensus       240 ~  240 (369)
T 2eez_A          240 P  240 (369)
T ss_dssp             -
T ss_pred             C
Confidence            3

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.12  E-value=3.2e-06  Score=68.65  Aligned_cols=76  Identities=16%  Similarity=0.043  Sum_probs=52.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHh----c-CCCEEEEc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL----D-GVTAVISC  128 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~----~-~~d~vi~~  128 (198)
                      ..+++|+|+|++|++|..+++.+...|++|++++|++.+...... -+... ..|+.+.+++.+.+    . ++|+||++
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~-~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~  245 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS-IGGEV-FIDFTKEKDIVGAVLKATDGGAHGVINV  245 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH-TTCCE-EEETTTCSCHHHHHHHHHTSCEEEEEEC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH-cCCce-EEecCccHhHHHHHHHHhCCCCCEEEEC
Confidence            356899999999999999999999999999999987654211111 12221 23766433333332    2 69999999


Q ss_pred             ccc
Q 029125          129 VGG  131 (198)
Q Consensus       129 ag~  131 (198)
                      +|.
T Consensus       246 ~g~  248 (347)
T 2hcy_A          246 SVS  248 (347)
T ss_dssp             SSC
T ss_pred             CCc
Confidence            984

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.08  E-value=2.5e-06  Score=68.88  Aligned_cols=75  Identities=27%  Similarity=0.248  Sum_probs=51.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHHHHHH----Hh-cCCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKE----AL-DGVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~----~~-~~~d~vi~  127 (198)
                      ..+++|+|+||+|++|..+++.+...|++|+++++++.+... ...  +.. ..+|..+.+++.+    +. .++|++|+
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~--g~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~  220 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI--GFD-AAFNYKTVNSLEEALKKASPDGYDCYFD  220 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT--TCS-EEEETTSCSCHHHHHHHHCTTCEEEEEE
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc--CCc-EEEecCCHHHHHHHHHHHhCCCCeEEEE
Confidence            456899999999999999999999999999999986543111 111  121 2246665222332    22 25899999


Q ss_pred             cccc
Q 029125          128 CVGG  131 (198)
Q Consensus       128 ~ag~  131 (198)
                      |+|.
T Consensus       221 ~~g~  224 (333)
T 1v3u_A          221 NVGG  224 (333)
T ss_dssp             SSCH
T ss_pred             CCCh
Confidence            9984

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.08  E-value=1.8e-06  Score=70.26  Aligned_cols=106  Identities=17%  Similarity=0.167  Sum_probs=71.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCccc------c-cCC-CCeEEEEccCCCHHHHHHHhcCCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR------D-SWA-NNVIWHQGNLLSSDSWKEALDGVT  123 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~------~-~~~-~~~~~~~~D~~d~~~~~~~~~~~d  123 (198)
                      ..+++|.|+|++|++|..++..++..|  .+|+++|+++.+...      . ... .++.+       ..++.++++++|
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-------t~d~~~al~dAD   78 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-------TSDIKEALTDAK   78 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-------ESCHHHHHTTEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-------cCCHHHHhCCCC
Confidence            346799999999999999999999988  589999986532110      0 011 11221       123567789999


Q ss_pred             EEEEccccCCC----CccceehhhHHHHHHHHHHHHcCCCE--EEEeec
Q 029125          124 AVISCVGGFGS----NSYMYKINGTANINAIRAASEKGVKR--FVYISA  166 (198)
Q Consensus       124 ~vi~~ag~~~~----~~~~~~~n~~~~~~~~~a~~~~~~~~--~v~~Ss  166 (198)
                      +||.++|....    ..+.+..|......+++.+.+.+.+-  ++.+|.
T Consensus        79 vVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsN  127 (343)
T 3fi9_A           79 YIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN  127 (343)
T ss_dssp             EEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred             EEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecC
Confidence            99999986432    23456788888888888888877654  455553

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.98  E-value=1.2e-05  Score=64.53  Aligned_cols=77  Identities=12%  Similarity=0.225  Sum_probs=57.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCC---Cccc--ccC--CCCeEEEEccCCCHHHHHHHhcCCCE
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGR---SSLR--DSW--ANNVIWHQGNLLSSDSWKEALDGVTA  124 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~---~~~~--~~~--~~~~~~~~~D~~d~~~~~~~~~~~d~  124 (198)
                      ..++++++|+|+ |++|++++..|++.|. +|++++|+.+   +...  ...  ..+..+...++.+.+++.+.+.++|+
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDi  229 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVI  229 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCE
Confidence            356889999997 8999999999999998 8999999832   2111  000  01233445577777788888889999


Q ss_pred             EEEccc
Q 029125          125 VISCVG  130 (198)
Q Consensus       125 vi~~ag  130 (198)
                      ||++..
T Consensus       230 IINaTp  235 (315)
T 3tnl_A          230 FTNATG  235 (315)
T ss_dssp             EEECSS
T ss_pred             EEECcc
Confidence            999875

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.97  E-value=2.1e-05  Score=65.53  Aligned_cols=73  Identities=15%  Similarity=0.157  Sum_probs=60.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG  130 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag  130 (198)
                      +++|+|+|. |-+|+.+++.|.+.|++|+++++++..... ....++.++.+|.++++.+.++ ++++|+||.+.+
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~-~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIET-LRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHH-HHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHH-HHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence            467999997 999999999999999999999998654211 1124678999999999999887 778999998775

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.94  E-value=3.7e-05  Score=62.11  Aligned_cols=103  Identities=17%  Similarity=0.235  Sum_probs=71.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCcc------c---ccCCCCeEEEEccCCCHHHHHHHhcCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSL------R---DSWANNVIWHQGNLLSSDSWKEALDGVT  123 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~------~---~~~~~~~~~~~~D~~d~~~~~~~~~~~d  123 (198)
                      .+++|.|+|+ |.+|..++..|+..|.  +|+++++++.+..      .   .....++.+...|       .+.++++|
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~~~aD   75 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDCKDAD   75 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGGTTCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHhCCCC
Confidence            4579999996 9999999999999886  8999998654311      0   0111244444333       24678999


Q ss_pred             EEEEccccCCCC----ccceehhhHHHHHHHHHHHHcCCC-EEEEee
Q 029125          124 AVISCVGGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYIS  165 (198)
Q Consensus       124 ~vi~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~S  165 (198)
                      +||.++|....+    ...+..|......+++.+.+.+.+ .++.+|
T Consensus        76 vVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt  122 (326)
T 3pqe_A           76 IVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT  122 (326)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence            999999864332    334667777777888888877655 455554

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.94  E-value=4e-06  Score=67.47  Aligned_cols=74  Identities=23%  Similarity=0.187  Sum_probs=51.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHHH---HHHHhc--CCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDS---WKEALD--GVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~---~~~~~~--~~d~vi~  127 (198)
                      ..+++|+|+||+|++|..+++.+...|++|+++++++.+... ...... ..  .|..+.+.   +.+...  ++|++|+
T Consensus       139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~~~~~~~~~~~D~vi~  215 (327)
T 1qor_A          139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAW-QV--INYREEDLVERLKEITGGKKVRVVYD  215 (327)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCS-EE--EETTTSCHHHHHHHHTTTCCEEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC-EE--EECCCccHHHHHHHHhCCCCceEEEE
Confidence            357899999999999999999999999999999987543111 111111 22  35555433   333332  5899999


Q ss_pred             ccc
Q 029125          128 CVG  130 (198)
Q Consensus       128 ~ag  130 (198)
                      |+|
T Consensus       216 ~~g  218 (327)
T 1qor_A          216 SVG  218 (327)
T ss_dssp             CSC
T ss_pred             CCc
Confidence            998

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.93  E-value=1e-05  Score=65.88  Aligned_cols=75  Identities=20%  Similarity=0.205  Sum_probs=52.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHH---HHHHHhc--CCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSD---SWKEALD--GVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~---~~~~~~~--~~d~vi~  127 (198)
                      ..+++|+|+||+|++|..+++.+...|++|+++++++.+... ...  +... ..|..+.+   .+.+...  ++|+||+
T Consensus       169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~--ga~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~  245 (351)
T 1yb5_A          169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN--GAHE-VFNHREVNYIDKIKKYVGEKGIDIIIE  245 (351)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT--TCSE-EEETTSTTHHHHHHHHHCTTCEEEEEE
T ss_pred             CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHc--CCCE-EEeCCCchHHHHHHHHcCCCCcEEEEE
Confidence            356799999999999999999999999999999987543211 111  1211 23555543   3333333  6999999


Q ss_pred             cccc
Q 029125          128 CVGG  131 (198)
Q Consensus       128 ~ag~  131 (198)
                      |+|.
T Consensus       246 ~~G~  249 (351)
T 1yb5_A          246 MLAN  249 (351)
T ss_dssp             SCHH
T ss_pred             CCCh
Confidence            9984

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.91  E-value=5.5e-06  Score=66.85  Aligned_cols=75  Identities=20%  Similarity=0.208  Sum_probs=52.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHH---HHHHHh--cCCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSD---SWKEAL--DGVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~---~~~~~~--~~~d~vi~  127 (198)
                      ..+++|+|+||+|++|..+++.+...|++|++++|++.+... ...... ..  .|..+.+   .+.+..  .++|++|+
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~-~~--~d~~~~~~~~~i~~~~~~~~~d~vi~  220 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCH-HT--INYSTQDFAEVVREITGGKGVDVVYD  220 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS-EE--EETTTSCHHHHHHHHHTTCCEEEEEE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC-EE--EECCCHHHHHHHHHHhCCCCCeEEEE
Confidence            456899999999999999999999999999999987533111 111111 12  3555533   333333  26899999


Q ss_pred             cccc
Q 029125          128 CVGG  131 (198)
Q Consensus       128 ~ag~  131 (198)
                      |+|.
T Consensus       221 ~~g~  224 (333)
T 1wly_A          221 SIGK  224 (333)
T ss_dssp             CSCT
T ss_pred             CCcH
Confidence            9985

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.90  E-value=4.2e-05  Score=61.77  Aligned_cols=104  Identities=12%  Similarity=0.136  Sum_probs=64.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCcc------c--ccCCCCeEEEEccCCCHHHHHHHhcCCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSL------R--DSWANNVIWHQGNLLSSDSWKEALDGVT  123 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~------~--~~~~~~~~~~~~D~~d~~~~~~~~~~~d  123 (198)
                      ..+++|.|+|+ |.+|..++..|+..|.  +++++++++.+..      .  ......+.+...|       .+.++++|
T Consensus         7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~aD   78 (326)
T 3vku_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDAD   78 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCCC
Confidence            35679999996 9999999999999886  8999998653211      0  0111234444332       24588999


Q ss_pred             EEEEccccCCC----CccceehhhHHHHHHHHHHHHcCCC-EEEEee
Q 029125          124 AVISCVGGFGS----NSYMYKINGTANINAIRAASEKGVK-RFVYIS  165 (198)
Q Consensus       124 ~vi~~ag~~~~----~~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~S  165 (198)
                      +||.++|....    ..+.+..|..-...+++.+.+.+.+ .++.+|
T Consensus        79 iVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           79 LVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             EEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             EEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            99999996432    3456677877777888888877655 444444

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.89  E-value=6.9e-06  Score=66.52  Aligned_cols=75  Identities=20%  Similarity=0.184  Sum_probs=51.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-c-cCCCCeEEEEccCCCH----HHHHHHh-cCCCEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-D-SWANNVIWHQGNLLSS----DSWKEAL-DGVTAVI  126 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~-~~~~~~~~~~~D~~d~----~~~~~~~-~~~d~vi  126 (198)
                      ..+++|+|+||+|.+|..+++.+...|++|+++++++.+... . ..... ..  .|..+.    +.+.++. .++|+||
T Consensus       154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~--~d~~~~~~~~~~~~~~~~~~~d~vi  230 (345)
T 2j3h_A          154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFD-DA--FNYKEESDLTAALKRCFPNGIDIYF  230 (345)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCS-EE--EETTSCSCSHHHHHHHCTTCEEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCc-eE--EecCCHHHHHHHHHHHhCCCCcEEE
Confidence            356899999999999999999999999999999987543211 1 12111 22  255543    2333332 2699999


Q ss_pred             Ecccc
Q 029125          127 SCVGG  131 (198)
Q Consensus       127 ~~ag~  131 (198)
                      +++|.
T Consensus       231 ~~~g~  235 (345)
T 2j3h_A          231 ENVGG  235 (345)
T ss_dssp             ESSCH
T ss_pred             ECCCH
Confidence            99974

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.89  E-value=7.9e-06  Score=66.55  Aligned_cols=74  Identities=19%  Similarity=0.191  Sum_probs=50.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcccccCCCCeEEEEccCCCHH---HHHHHhc-CCCEEEEcccc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSD---SWKEALD-GVTAVISCVGG  131 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~-~~d~vi~~ag~  131 (198)
                      ++|+|+||+|++|..+++.+...|+ +|+++++++.+.......-+.. ..+|..+.+   .+.+... ++|++|+|+|.
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~d~vi~~~G~  240 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD-AAINYKKDNVAEQLRESCPAGVDVYFDNVGG  240 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS-EEEETTTSCHHHHHHHHCTTCEEEEEESCCH
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-eEEecCchHHHHHHHHhcCCCCCEEEECCCH
Confidence            8999999999999999999999999 9999998754311110001221 123665533   2333332 59999999983

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.87  E-value=8.1e-07  Score=67.04  Aligned_cols=73  Identities=12%  Similarity=0.132  Sum_probs=47.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEE-ccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQ-GNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ++|+|+||+|.+|..+++.|++.|++|++++|++.+........+. .+. .|+. .+++.++++++|+||++...
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~D~Vi~~~~~   74 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-IAGDASIT-GMKNEDAAEACDIAVLTIPW   74 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-HHSSCCEE-EEEHHHHHHHCSEEEECSCH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-ccccCCCC-hhhHHHHHhcCCEEEEeCCh
Confidence            4799999999999999999999999999999975431110000000 000 1121 12345667789999998753

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.85  E-value=1.5e-05  Score=64.31  Aligned_cols=77  Identities=19%  Similarity=0.170  Sum_probs=51.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHH---HHHHh-cCCCEEEEcc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS---WKEAL-DGVTAVISCV  129 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~-~~~d~vi~~a  129 (198)
                      ..+++|+|+||+|.+|..+++.+...|++|+++++++.+.......-+... ..|..+.+.   +.+.. +++|++|+|+
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~  226 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDG-AIDYKNEDLAAGLKRECPKGIDVFFDNV  226 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSE-EEETTTSCHHHHHHHHCTTCEEEEEESS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCE-EEECCCHHHHHHHHHhcCCCceEEEECC
Confidence            457899999999999999999999999999999987544221101112221 135544332   33322 3699999999


Q ss_pred             cc
Q 029125          130 GG  131 (198)
Q Consensus       130 g~  131 (198)
                      |.
T Consensus       227 g~  228 (336)
T 4b7c_A          227 GG  228 (336)
T ss_dssp             CH
T ss_pred             Cc
Confidence            84

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.84  E-value=8.9e-06  Score=64.13  Aligned_cols=35  Identities=26%  Similarity=0.579  Sum_probs=28.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHH-CCCeEEE-eecCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALD-RGLTVAS-LSRSG   90 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~-~g~~V~~-l~r~~   90 (198)
                      +++|+|+|++|.+|+.+++.+.+ .+++++. +++.+
T Consensus         5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~   41 (273)
T 1dih_A            5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREG   41 (273)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTT
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCc
Confidence            46999999999999999999885 4678774 45443

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.84  E-value=2.8e-05  Score=62.83  Aligned_cols=71  Identities=14%  Similarity=0.110  Sum_probs=59.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG  130 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag  130 (198)
                      .++++|.|+ |.+|+.+++.|.++|+ |++++++++...  ....++.++.+|.+|++.+.++ ++++|.||.+.+
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~--~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~  186 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK--VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLE  186 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH--HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCS
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh--HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCC
Confidence            468999997 9999999999999999 999988765432  2235789999999999999987 788999998764

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.82  E-value=4.3e-06  Score=65.80  Aligned_cols=72  Identities=14%  Similarity=0.187  Sum_probs=48.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ..+++++|+|+ |++|++++..|++.|++|++++|+..+...  ........+...|+   +++.+  .++|+||++++.
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~---~~~~~--~~~DivVn~t~~  190 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM---DELEG--HEFDLIINATSS  190 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS---GGGTT--CCCSEEEECCSC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecH---HHhcc--CCCCEEEECCCC
Confidence            45789999998 889999999999999999999998543211  11111001112332   22222  589999999984

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.79  E-value=2.2e-05  Score=64.10  Aligned_cols=90  Identities=18%  Similarity=0.213  Sum_probs=57.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC-----C-eEEEeecCCC--Cccccc---CC--CCeEEEEccCCCHHHHHHHhcCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG-----L-TVASLSRSGR--SSLRDS---WA--NNVIWHQGNLLSSDSWKEALDGV  122 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g-----~-~V~~l~r~~~--~~~~~~---~~--~~~~~~~~D~~d~~~~~~~~~~~  122 (198)
                      |++|+|.||||.+|+.+++.|++++     + +++.+.++.+  +.....   +.  ..+.+.  |+ +++    .+.++
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~--~~-~~~----~~~~~   81 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVE--PT-EAA----VLGGH   81 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCE--EC-CHH----HHTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeec--cC-CHH----HhcCC
Confidence            5799999999999999999999887     4 7777764322  211110   00  112221  22 232    25589


Q ss_pred             CEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          123 TAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       123 d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      |+||.+.|...            +..+++.+ +.|. ++|-+|+
T Consensus        82 DvVf~alg~~~------------s~~~~~~~-~~G~-~vIDlSa  111 (352)
T 2nqt_A           82 DAVFLALPHGH------------SAVLAQQL-SPET-LIIDCGA  111 (352)
T ss_dssp             SEEEECCTTSC------------CHHHHHHS-CTTS-EEEECSS
T ss_pred             CEEEECCCCcc------------hHHHHHHH-hCCC-EEEEECC
Confidence            99999987532            23556677 6675 6777776

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.78  E-value=1.8e-05  Score=66.95  Aligned_cols=74  Identities=15%  Similarity=0.253  Sum_probs=59.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG  130 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag  130 (198)
                      .|+|+|.|+ |-+|+++++.|.++|++|+++++++.........-++.++.+|.++++-+.++ ++++|.+|-+.+
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~   77 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTN   77 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCS
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcC
Confidence            478999998 99999999999999999999998765421111113678999999999999987 578999987554

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.77  E-value=0.00026  Score=57.17  Aligned_cols=105  Identities=17%  Similarity=0.136  Sum_probs=66.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccc--c---------cCCCCeEEEEccCCCHHHHHHHhcC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR--D---------SWANNVIWHQGNLLSSDSWKEALDG  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~--~---------~~~~~~~~~~~D~~d~~~~~~~~~~  121 (198)
                      .++++|.|+|| |.+|..++..|+..|+ +|.+++++++....  .         ....++.. .      .++.+++++
T Consensus         7 ~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t------~d~~ea~~~   78 (331)
T 1pzg_A            7 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E------YSYEAALTG   78 (331)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E------CSHHHHHTT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e------CCHHHHhCC
Confidence            34579999998 9999999999999998 99999998643111  0         00112221 1      224557889


Q ss_pred             CCEEEEccccCCCC---------ccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          122 VTAVISCVGGFGSN---------SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       122 ~d~vi~~ag~~~~~---------~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      +|+||.++|....+         ......|..-...+++.+.+...+-++.+.|
T Consensus        79 aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  132 (331)
T 1pzg_A           79 ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  132 (331)
T ss_dssp             CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            99999999854322         1223345555566777777765554443333

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.76  E-value=2.6e-05  Score=63.51  Aligned_cols=75  Identities=17%  Similarity=0.209  Sum_probs=52.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHH---HHHHHhc--CCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSD---SWKEALD--GVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~---~~~~~~~--~~d~vi~  127 (198)
                      ..+++|+|+||+|++|..+++.+...|++|++++|++.+... ...  +.. ...|..+.+   .+.+...  ++|++|+
T Consensus       161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~  237 (354)
T 2j8z_A          161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKL--GAA-AGFNYKKEDFSEATLKFTKGAGVNLILD  237 (354)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--TCS-EEEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc--CCc-EEEecCChHHHHHHHHHhcCCCceEEEE
Confidence            356899999999999999999999999999999987543111 111  111 123555433   3334333  6899999


Q ss_pred             cccc
Q 029125          128 CVGG  131 (198)
Q Consensus       128 ~ag~  131 (198)
                      |+|.
T Consensus       238 ~~G~  241 (354)
T 2j8z_A          238 CIGG  241 (354)
T ss_dssp             SSCG
T ss_pred             CCCc
Confidence            9985

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.73  E-value=0.00018  Score=58.46  Aligned_cols=91  Identities=14%  Similarity=0.176  Sum_probs=53.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC---eEEEee-cCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL---TVASLS-RSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~---~V~~l~-r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      +++|+|.||+|.+|+.+++.|.++++   +++.+. ++....... . .+..+...|+ +++    .++++|+||.+.|.
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~-~-~g~~i~~~~~-~~~----~~~~~DvV~~a~g~   78 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG-F-AESSLRVGDV-DSF----DFSSVGLAFFAAAA   78 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE-E-TTEEEECEEG-GGC----CGGGCSEEEECSCH
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccc-c-CCcceEEecC-CHH----HhcCCCEEEEcCCc
Confidence            36899999999999999999997654   555554 322111101 1 1111111122 122    25689999999874


Q ss_pred             CCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       132 ~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      .            ....++..+.+.|.+ +|.+|+
T Consensus        79 ~------------~s~~~a~~~~~aG~k-vId~Sa  100 (340)
T 2hjs_A           79 E------------VSRAHAERARAAGCS-VIDLSG  100 (340)
T ss_dssp             H------------HHHHHHHHHHHTTCE-EEETTC
T ss_pred             H------------HHHHHHHHHHHCCCE-EEEeCC
Confidence            2            223455666666764 555554

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.73  E-value=4.3e-05  Score=61.87  Aligned_cols=76  Identities=25%  Similarity=0.281  Sum_probs=51.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCC-HHHHHHHhc--CCCEEEEcc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLS-SDSWKEALD--GVTAVISCV  129 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d-~~~~~~~~~--~~d~vi~~a  129 (198)
                      ..+++|+|+||+|.+|..+++.+...|++|+++++++.+... .... .-.++..+ .+ .+.+.++..  ++|++|+++
T Consensus       158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g-a~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~  235 (342)
T 4eye_A          158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVG-ADIVLPLE-EGWAKAVREATGGAGVDMVVDPI  235 (342)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHT-CSEEEESS-TTHHHHHHHHTTTSCEEEEEESC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcC-CcEEecCc-hhHHHHHHHHhCCCCceEEEECC
Confidence            357899999999999999999999999999999987654211 1111 11333333 22 233444443  599999999


Q ss_pred             cc
Q 029125          130 GG  131 (198)
Q Consensus       130 g~  131 (198)
                      |.
T Consensus       236 g~  237 (342)
T 4eye_A          236 GG  237 (342)
T ss_dssp             C-
T ss_pred             ch
Confidence            85

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.72  E-value=0.00015  Score=58.09  Aligned_cols=36  Identities=28%  Similarity=0.364  Sum_probs=30.7

Q ss_pred             CCCe-EEEEc-CC-----------------chhHHHHHHHHHHCCCeEEEeecCC
Q 029125           55 PSEK-LLVLG-GN-----------------GFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        55 ~~~~-vlvtG-at-----------------G~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      .+++ |+||+ +|                 |..|.++++.++++|++|+++.+..
T Consensus        35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence            4556 88884 46                 8899999999999999999999854

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.71  E-value=4.8e-05  Score=60.94  Aligned_cols=103  Identities=16%  Similarity=0.178  Sum_probs=66.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccc--c---c----CCCCeEEEE-ccCCCHHHHHHHhcCCCE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR--D---S----WANNVIWHQ-GNLLSSDSWKEALDGVTA  124 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~--~---~----~~~~~~~~~-~D~~d~~~~~~~~~~~d~  124 (198)
                      +++|.|+|| |.+|..++..|+..|+ +|.++++++.+...  .   .    ......+.. .|      + +.++++|+
T Consensus         2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d------~-~a~~~aD~   73 (309)
T 1ur5_A            2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNN------Y-ADTANSDV   73 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC------G-GGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCC------H-HHHCCCCE
Confidence            368999998 9999999999999996 89999987543111  0   0    011222221 22      2 45789999


Q ss_pred             EEEccccCCCC----ccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          125 VISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       125 vi~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      ||.++|....+    ......|......+.+.+.+.+.+.++.+.|
T Consensus        74 Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           74 IVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             EEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence            99999864322    2334556666667788887777665655444

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.65  E-value=3e-05  Score=63.11  Aligned_cols=75  Identities=21%  Similarity=0.247  Sum_probs=51.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHH---HHHHHh-cCCCEEEEc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSD---SWKEAL-DGVTAVISC  128 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~---~~~~~~-~~~d~vi~~  128 (198)
                      ..+++|+|+||+|.+|..+++.+...|++|+++++++.+... ...... .++  |..+.+   .+.+.. .++|++|++
T Consensus       166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~-~~~--~~~~~~~~~~~~~~~~~g~Dvvid~  242 (353)
T 4dup_A          166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAK-RGI--NYRSEDFAAVIKAETGQGVDIILDM  242 (353)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS-EEE--ETTTSCHHHHHHHHHSSCEEEEEES
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCC-EEE--eCCchHHHHHHHHHhCCCceEEEEC
Confidence            356899999999999999999999999999999987544211 111111 222  444432   233322 369999999


Q ss_pred             ccc
Q 029125          129 VGG  131 (198)
Q Consensus       129 ag~  131 (198)
                      +|.
T Consensus       243 ~g~  245 (353)
T 4dup_A          243 IGA  245 (353)
T ss_dssp             CCG
T ss_pred             CCH
Confidence            984

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.64  E-value=8e-05  Score=59.97  Aligned_cols=75  Identities=15%  Similarity=0.154  Sum_probs=51.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCH---HHHHHHhc--CCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSS---DSWKEALD--GVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~---~~~~~~~~--~~d~vi~  127 (198)
                      ..+++|+|+||+|.+|..+++.+...|++|+++++++.+... .... .-.++  |..+.   +.+.+...  ++|+||+
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g-a~~~~--~~~~~~~~~~~~~~~~~~g~D~vid  223 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYG-AEYLI--NASKEDILRQVLKFTNGKGVDASFD  223 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-CSEEE--ETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-CcEEE--eCCCchHHHHHHHHhCCCCceEEEE
Confidence            457899999999999999999999999999999986543211 1111 11222  44332   33444432  6899999


Q ss_pred             cccc
Q 029125          128 CVGG  131 (198)
Q Consensus       128 ~ag~  131 (198)
                      ++|.
T Consensus       224 ~~g~  227 (334)
T 3qwb_A          224 SVGK  227 (334)
T ss_dssp             CCGG
T ss_pred             CCCh
Confidence            9985

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.64  E-value=0.00013  Score=58.44  Aligned_cols=106  Identities=16%  Similarity=0.137  Sum_probs=69.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHC-C--CeEEEeecCCCCc---cc-ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           57 EKLLVLGGNGFVGSHICREALDR-G--LTVASLSRSGRSS---LR-DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~-g--~~V~~l~r~~~~~---~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      ++|.|+||+|.+|..++..|..+ +  .+++++++.+...   .+ ........+... ..  ++..+.++++|+||.++
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~-~~--~~~~~~~~~aDivii~a   77 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SG--EDATPALEGADVVLISA   77 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEE-CS--SCCHHHHTTCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEe-cC--CCcHHHhCCCCEEEEeC
Confidence            58999999999999999999875 5  5899999875110   00 111112222211 01  11245688999999999


Q ss_pred             ccCCCC----ccceehhhHHHHHHHHHHHHcCCC-EEEEee
Q 029125          130 GGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYIS  165 (198)
Q Consensus       130 g~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~S  165 (198)
                      |....+    .+.+..|..-...+.+.+.+.+.+ .++.+|
T Consensus        78 g~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt  118 (312)
T 3hhp_A           78 GVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (312)
T ss_dssp             SCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence            865432    445677877778888888777654 455554

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.63  E-value=3.5e-05  Score=62.38  Aligned_cols=74  Identities=18%  Similarity=0.139  Sum_probs=51.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCH---HHHHHHhc--CCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSS---DSWKEALD--GVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~---~~~~~~~~--~~d~vi~  127 (198)
                      ..+++|+|+|++|.+|..+++.+...|++|+++++++.+... ...  +... ..|..+.   +.+.++..  ++|+||+
T Consensus       165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~--ga~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~  241 (343)
T 2eih_A          165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKAL--GADE-TVNYTHPDWPKEVRRLTGGKGADKVVD  241 (343)
T ss_dssp             CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH--TCSE-EEETTSTTHHHHHHHHTTTTCEEEEEE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc--CCCE-EEcCCcccHHHHHHHHhCCCCceEEEE
Confidence            356799999999999999999999999999999987543211 111  1211 1366553   23444443  6899999


Q ss_pred             ccc
Q 029125          128 CVG  130 (198)
Q Consensus       128 ~ag  130 (198)
                      ++|
T Consensus       242 ~~g  244 (343)
T 2eih_A          242 HTG  244 (343)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            998

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.62  E-value=0.00038  Score=55.91  Aligned_cols=103  Identities=10%  Similarity=0.104  Sum_probs=65.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCccc------cc--CCCCeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------DS--WANNVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~------~~--~~~~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      +++|.|+|+ |.+|..++..|+..|.  +|++++.++.+...      ..  ....+.+..   .+    .++++++|+|
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~----~~a~~~aDvV   78 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GD----YSDVKDCDVI   78 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE---CC----HHHhCCCCEE
Confidence            468999998 9999999999999986  99999987644211      00  111222221   12    3458899999


Q ss_pred             EEccccCCCC----ccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       126 i~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      |.++|....+    .+....|......+++.+.+.+..-++.+.|
T Consensus        79 ii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (318)
T 1y6j_A           79 VVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  123 (318)
T ss_dssp             EECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence            9999864322    2344666666777888887766554444433

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.62  E-value=0.00028  Score=57.39  Aligned_cols=94  Identities=15%  Similarity=0.139  Sum_probs=57.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccccc-CCCCeEE-EEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDS-WANNVIW-HQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~~-~~~~~~~-~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      +++|.|.||+|.+|+.+++.|.+++. +++.+.++........ ..+.+.- ....+.+.+   + +.++|+||.+++..
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~---~-~~~vDvV~~a~g~~   79 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPE---K-LEPADILVLALPHG   79 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGG---G-CCCCSEEEECCCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchh---H-hcCCCEEEEcCCcH
Confidence            57899999999999999999998764 8777765432211100 0000000 011222332   2 47899999998753


Q ss_pred             CCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       133 ~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      .            ...++..+.+.|. ++|-.|+
T Consensus        80 ~------------s~~~a~~~~~aG~-~VId~Sa  100 (345)
T 2ozp_A           80 V------------FAREFDRYSALAP-VLVDLSA  100 (345)
T ss_dssp             H------------HHHTHHHHHTTCS-EEEECSS
T ss_pred             H------------HHHHHHHHHHCCC-EEEEcCc
Confidence            1            3345666667776 5777776

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.62  E-value=2.9e-05  Score=63.09  Aligned_cols=106  Identities=17%  Similarity=0.120  Sum_probs=68.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-------eEEEeecCCCCc------cc--c-cCCCCeEEEEccCCCHHHHHHH
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRSS------LR--D-SWANNVIWHQGNLLSSDSWKEA  118 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-------~V~~l~r~~~~~------~~--~-~~~~~~~~~~~D~~d~~~~~~~  118 (198)
                      +..||.|+||+|.||+.|+..|+....       ++.+++..+...      .+  . ..+........+     +..++
T Consensus        23 ~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~-----~~~~a   97 (345)
T 4h7p_A           23 SAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA-----DPRVA   97 (345)
T ss_dssp             CCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES-----CHHHH
T ss_pred             CCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC-----ChHHH
Confidence            345999999999999999998887542       688888754211      00  0 011111222221     23567


Q ss_pred             hcCCCEEEEccccCCCC----ccceehhhHHHHHHHHHHHHcC-CC-EEEEee
Q 029125          119 LDGVTAVISCVGGFGSN----SYMYKINGTANINAIRAASEKG-VK-RFVYIS  165 (198)
Q Consensus       119 ~~~~d~vi~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~-~~-~~v~~S  165 (198)
                      +++.|+||-+||....+    .+.+..|..-...+.+...+.. .. .++.+|
T Consensus        98 ~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvs  150 (345)
T 4h7p_A           98 FDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVG  150 (345)
T ss_dssp             TTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             hCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeC
Confidence            99999999999965433    4567788887778888887754 33 445555

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.61  E-value=9.8e-05  Score=60.34  Aligned_cols=75  Identities=16%  Similarity=0.077  Sum_probs=54.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      .+.+|+|+|+ |.+|..+++.+...|++|+++++++.+.......-+... ..|..+.+.+.++..++|+||.++|.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~-v~~~~~~~~~~~~~~~~D~vid~~g~  261 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADS-FLVSRDQEQMQAAAGTLDGIIDTVSA  261 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSE-EEETTCHHHHHHTTTCEEEEEECCSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCce-EEeccCHHHHHHhhCCCCEEEECCCc
Confidence            5679999996 999999999999999999999987654221110112221 23666777777777789999999985

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.61  E-value=8.3e-05  Score=59.03  Aligned_cols=75  Identities=21%  Similarity=0.203  Sum_probs=52.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ..+.+|+|+|++|.+|..+++.+...|++|+++++++.+...... -+... ..|..+.+++.+.++++|++|+ +|.
T Consensus       124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga~~-~~~~~~~~~~~~~~~~~d~vid-~g~  198 (302)
T 1iz0_A          124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-LGAEE-AATYAEVPERAKAWGGLDLVLE-VRG  198 (302)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-TTCSE-EEEGGGHHHHHHHTTSEEEEEE-CSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cCCCE-EEECCcchhHHHHhcCceEEEE-CCH
Confidence            456899999999999999999999999999999987554221111 12221 1355441334444588999999 874

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.61  E-value=0.00014  Score=58.32  Aligned_cols=78  Identities=14%  Similarity=0.213  Sum_probs=54.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCC---ccc--ccC--CCCeEEEEccCCCHHHHHHHhcCCCE
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS---SLR--DSW--ANNVIWHQGNLLSSDSWKEALDGVTA  124 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~---~~~--~~~--~~~~~~~~~D~~d~~~~~~~~~~~d~  124 (198)
                      ...+++++|+|+ |+.|++++..|++.|. +|++.+|+..+   ...  ...  ..+..+...++.+.+.+.+.+.+.|+
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~Di  223 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADI  223 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSE
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceE
Confidence            356789999997 9999999999999997 89999998332   111  000  11233444466665445666778999


Q ss_pred             EEEcccc
Q 029125          125 VISCVGG  131 (198)
Q Consensus       125 vi~~ag~  131 (198)
                      ||++...
T Consensus       224 IINaTp~  230 (312)
T 3t4e_A          224 LTNGTKV  230 (312)
T ss_dssp             EEECSST
T ss_pred             EEECCcC
Confidence            9998753

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.61  E-value=5.7e-05  Score=61.20  Aligned_cols=75  Identities=23%  Similarity=0.251  Sum_probs=51.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHC-CCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHH---HHHHHh--cCCCEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSD---SWKEAL--DGVTAVI  126 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~---~~~~~~--~~~d~vi  126 (198)
                      ..+++|+|+|++|.+|..+++.+... |++|+++++++.+... ...... .+  .|..+.+   .+.++.  .++|+||
T Consensus       169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~~~~~~~~~~~d~vi  245 (347)
T 1jvb_A          169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD-YV--INASMQDPLAEIRRITESKGVDAVI  245 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCS-EE--EETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCC-EE--ecCCCccHHHHHHHHhcCCCceEEE
Confidence            35689999999989999999999998 9999999987543211 111111 22  2454433   345555  3699999


Q ss_pred             Ecccc
Q 029125          127 SCVGG  131 (198)
Q Consensus       127 ~~ag~  131 (198)
                      +++|.
T Consensus       246 ~~~g~  250 (347)
T 1jvb_A          246 DLNNS  250 (347)
T ss_dssp             ESCCC
T ss_pred             ECCCC
Confidence            99984

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.60  E-value=6.8e-05  Score=59.73  Aligned_cols=73  Identities=15%  Similarity=0.120  Sum_probs=52.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ..+++|+|+|+ |++|+.++..|++.|+ +|++.+|+..+...  ........    ++.+.+++.+.++++|+||++.+
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~----~~~~~~~~~~~~~~aDivIn~t~  213 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS----AYFSLAEAETRLAEYDIIINTTS  213 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC----CEECHHHHHHTGGGCSEEEECSC
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC----ceeeHHHHHhhhccCCEEEECCC
Confidence            46789999997 8899999999999997 99999998644211  11111100    12233567777889999999987


Q ss_pred             c
Q 029125          131 G  131 (198)
Q Consensus       131 ~  131 (198)
                      .
T Consensus       214 ~  214 (297)
T 2egg_A          214 V  214 (297)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.59  E-value=9.6e-05  Score=59.69  Aligned_cols=75  Identities=15%  Similarity=0.212  Sum_probs=51.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCH---HHHHHHhc--CCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSS---DSWKEALD--GVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~---~~~~~~~~--~~d~vi~  127 (198)
                      ..+++|+|+|++|.+|..+++.+...|++|+++++++.+... ...... .++  |..+.   +.+.+...  ++|+||+
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~-~~~--~~~~~~~~~~~~~~~~~~g~Dvvid  219 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAA-YVI--DTSTAPLYETVMELTNGIGADAAID  219 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCS-EEE--ETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCc-EEE--eCCcccHHHHHHHHhCCCCCcEEEE
Confidence            456899999999999999999888899999999987655221 111111 222  44433   33444433  6899999


Q ss_pred             cccc
Q 029125          128 CVGG  131 (198)
Q Consensus       128 ~ag~  131 (198)
                      ++|.
T Consensus       220 ~~g~  223 (340)
T 3gms_A          220 SIGG  223 (340)
T ss_dssp             SSCH
T ss_pred             CCCC
Confidence            9984

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.59  E-value=9.4e-05  Score=56.01  Aligned_cols=67  Identities=18%  Similarity=0.207  Sum_probs=47.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      .+++|.|+| +|.+|..+++.|.+.|++|++.+|++...... ...++...        ++.++++++|+||.+...
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~-~~~g~~~~--------~~~~~~~~~DvVi~av~~   93 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARL-FPSAAQVT--------FQEEAVSSPEVIFVAVFR   93 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHH-SBTTSEEE--------EHHHHTTSCSEEEECSCG
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCcee--------cHHHHHhCCCEEEECCCh
Confidence            457899999 69999999999999999999999875432111 11233332        245667889999988764

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.57  E-value=2.7e-05  Score=63.78  Aligned_cols=74  Identities=20%  Similarity=0.213  Sum_probs=53.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      .+++|+|+|+ |.+|..+++.+...|++|++++|++.+...  ......+..   +..+.+++.+.++++|+||++++..
T Consensus       166 ~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~DvVI~~~~~~  241 (361)
T 1pjc_A          166 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVEL---LYSNSAEIETAVAEADLLIGAVLVP  241 (361)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEE---EECCHHHHHHHHHTCSEEEECCCCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEe---eeCCHHHHHHHHcCCCEEEECCCcC
Confidence            4589999999 999999999999999999999998654211  111112222   2234566777788999999999753

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.57  E-value=6.4e-06  Score=58.41  Aligned_cols=71  Identities=13%  Similarity=0.115  Sum_probs=49.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      +++|+|+|+ |.+|+.+++.|.+.|++|++.+|++.+.......-+....  +.   +++.++++++|+||.+.+..
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~--~~---~~~~~~~~~~Divi~at~~~   91 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYV--LI---NDIDSLIKNNDVIITATSSK   91 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEE--EC---SCHHHHHHTCSEEEECSCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceE--ee---cCHHHHhcCCCEEEEeCCCC
Confidence            679999996 9999999999999999999999976542110000112222  22   23456678999999988754

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.57  E-value=0.00014  Score=57.27  Aligned_cols=72  Identities=18%  Similarity=0.211  Sum_probs=43.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHC-CCeEEE-eecCCCCcccccCC--CCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDR-GLTVAS-LSRSGRSSLRDSWA--NNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~-g~~V~~-l~r~~~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      |++|.|+|++|.+|+.+++.+.+. +.+++. ++|+..........  .+...   ++.-.+++.++++++|+||.+..
T Consensus         7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~---gv~v~~dl~~ll~~~DVVIDfT~   82 (272)
T 4f3y_A            7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQT---GVALTDDIERVCAEADYLIDFTL   82 (272)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCC---SCBCBCCHHHHHHHCSEEEECSC
T ss_pred             ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCC---CceecCCHHHHhcCCCEEEEcCC
Confidence            579999999999999999999876 567766 46653321100000  00000   11112234555567899988764

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.56  E-value=9.3e-05  Score=58.39  Aligned_cols=69  Identities=17%  Similarity=0.087  Sum_probs=51.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ..+++++|+|+ |+.|+.++..|++.|+ +|++.+|+..+....  ...+...     ..+++.+++++.|+||++..
T Consensus       115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l--a~~~~~~-----~~~~~~~~~~~aDiVInaTp  184 (277)
T 3don_A          115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW--SLNINKI-----NLSHAESHLDEFDIIINTTP  184 (277)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC--CSCCEEE-----CHHHHHHTGGGCSEEEECCC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH--HHhcccc-----cHhhHHHHhcCCCEEEECcc
Confidence            45789999997 8999999999999998 899999986553221  1222222     24556777889999999865

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.56  E-value=5.9e-05  Score=60.58  Aligned_cols=75  Identities=21%  Similarity=0.171  Sum_probs=51.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCH---HHHHHHhc--CCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSS---DSWKEALD--GVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~---~~~~~~~~--~~d~vi~  127 (198)
                      ..+++|+|+||+|.+|..+++.+...|++|+++++++.+... ...... .++  |..+.   +.+.+...  ++|+||+
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~-~~~--~~~~~~~~~~~~~~~~~~g~Dvvid  215 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAW-ETI--DYSHEDVAKRVLELTDGKKCPVVYD  215 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCS-EEE--ETTTSCHHHHHHHHTTTCCEEEEEE
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC-EEE--eCCCccHHHHHHHHhCCCCceEEEE
Confidence            457899999999999999999999999999999987543211 111111 222  44433   33444443  6999999


Q ss_pred             cccc
Q 029125          128 CVGG  131 (198)
Q Consensus       128 ~ag~  131 (198)
                      ++|.
T Consensus       216 ~~g~  219 (325)
T 3jyn_A          216 GVGQ  219 (325)
T ss_dssp             SSCG
T ss_pred             CCCh
Confidence            9984

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.56  E-value=7.9e-05  Score=53.71  Aligned_cols=66  Identities=9%  Similarity=0.128  Sum_probs=48.3

Q ss_pred             chhHHHHHHHHHHCCCeEEEeecCCCCccc--------ccCCCCeEEEEccCCCH--HHHHHHhc------CCCEEEEcc
Q 029125           66 GFVGSHICREALDRGLTVASLSRSGRSSLR--------DSWANNVIWHQGNLLSS--DSWKEALD------GVTAVISCV  129 (198)
Q Consensus        66 G~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--------~~~~~~~~~~~~D~~d~--~~~~~~~~------~~d~vi~~a  129 (198)
                      |.++...++.|++.|++|++..|+......        ......+..+.+|++++  +++.++++      +-|++|||+
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLVnnA  105 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLVHCL  105 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEEECS
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEEECC
Confidence            468899999999999999988876443211        11123466788999998  88776653      239999999


Q ss_pred             cc
Q 029125          130 GG  131 (198)
Q Consensus       130 g~  131 (198)
                      |.
T Consensus       106 gg  107 (157)
T 3gxh_A          106 AN  107 (157)
T ss_dssp             BS
T ss_pred             CC
Confidence            85

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.55  E-value=0.00045  Score=55.65  Aligned_cols=104  Identities=14%  Similarity=0.186  Sum_probs=70.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccc------c---cCCCCeEEE-EccCCCHHHHHHHhcCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR------D---SWANNVIWH-QGNLLSSDSWKEALDGVT  123 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~------~---~~~~~~~~~-~~D~~d~~~~~~~~~~~d  123 (198)
                      ++++|.|+|+ |.+|..++..|+..|+ +|+++++++.+...      .   .......+. ..|      . ++++++|
T Consensus         6 ~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d------~-~a~~~aD   77 (324)
T 3gvi_A            6 ARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAND------Y-AAIEGAD   77 (324)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESS------G-GGGTTCS
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCC------H-HHHCCCC
Confidence            3569999998 9999999999999998 99999998654210      0   001122222 222      2 5688999


Q ss_pred             EEEEccccCCC----CccceehhhHHHHHHHHHHHHcCCC-EEEEeec
Q 029125          124 AVISCVGGFGS----NSYMYKINGTANINAIRAASEKGVK-RFVYISA  166 (198)
Q Consensus       124 ~vi~~ag~~~~----~~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~Ss  166 (198)
                      +||.++|....    ..+.+..|..-...+++.+.+.+.. .++.+|.
T Consensus        78 iVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN  125 (324)
T 3gvi_A           78 VVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN  125 (324)
T ss_dssp             EEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence            99999986432    2344566777777788888777654 4555553

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.54  E-value=0.00054  Score=55.14  Aligned_cols=103  Identities=16%  Similarity=0.116  Sum_probs=69.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccc------c---cCCCCeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR------D---SWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~------~---~~~~~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      +++|.|+|+ |.+|..++..|+..|. +|+++++++.+...      .   .......+...+  |    .++++++|+|
T Consensus         5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d----~~a~~~aDvV   77 (321)
T 3p7m_A            5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--D----YKDLENSDVV   77 (321)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--C----GGGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--C----HHHHCCCCEE
Confidence            578999995 9999999999999887 99999998654210      0   001122332111  2    2468899999


Q ss_pred             EEccccCCCC----ccceehhhHHHHHHHHHHHHcCCC-EEEEee
Q 029125          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYIS  165 (198)
Q Consensus       126 i~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~S  165 (198)
                      |.++|....+    .+.+..|..-...+++.+.+.+.. .++.+|
T Consensus        78 Ii~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           78 IVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            9999864432    234566777777888888777655 455554

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.54  E-value=0.00011  Score=59.92  Aligned_cols=75  Identities=23%  Similarity=0.219  Sum_probs=50.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCH---HHHHHHh-cCCCEEEEc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSS---DSWKEAL-DGVTAVISC  128 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~---~~~~~~~-~~~d~vi~~  128 (198)
                      ..+++|+|+||+|.+|..+++.+...|++|+++++++.+... ...... .++  |..+.   +.+.+.. .++|+||++
T Consensus       162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~-~~~--~~~~~~~~~~~~~~~~~g~D~vid~  238 (362)
T 2c0c_A          162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCD-RPI--NYKTEPVGTVLKQEYPEGVDVVYES  238 (362)
T ss_dssp             CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS-EEE--ETTTSCHHHHHHHHCTTCEEEEEEC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCc-EEE--ecCChhHHHHHHHhcCCCCCEEEEC
Confidence            356799999999999999999999999999999987543111 111111 222  43332   2233322 368999999


Q ss_pred             ccc
Q 029125          129 VGG  131 (198)
Q Consensus       129 ag~  131 (198)
                      +|.
T Consensus       239 ~g~  241 (362)
T 2c0c_A          239 VGG  241 (362)
T ss_dssp             SCT
T ss_pred             CCH
Confidence            983

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.52  E-value=0.00026  Score=56.26  Aligned_cols=103  Identities=15%  Similarity=0.085  Sum_probs=69.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCcc------c---ccCCCCeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSL------R---DSWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~------~---~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      |+|.|+|+ |.+|..++..|+..|+  +|.++++++....      .   ........+...  .|    .+++++.|+|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~~aDiV   73 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhCCCCEE
Confidence            58999999 9999999999999887  9999999764311      0   001122232211  12    3568899999


Q ss_pred             EEccccCCCC----ccceehhhHHHHHHHHHHHHcCCC-EEEEeec
Q 029125          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYISA  166 (198)
Q Consensus       126 i~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~Ss  166 (198)
                      |.++|....+    .+.+..|..-...+++.+.+.+.+ .|+.+|.
T Consensus        74 Viaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN  119 (294)
T 1oju_A           74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence            9999865432    234566777777888888887655 4555553

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.51  E-value=0.0003  Score=59.27  Aligned_cols=95  Identities=19%  Similarity=0.301  Sum_probs=62.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC-C---eEEEeecCCCCcccccCCCCeEEEEccCC--CH-HHHHHHhcCCCEEEEc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG-L---TVASLSRSGRSSLRDSWANNVIWHQGNLL--SS-DSWKEALDGVTAVISC  128 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g-~---~V~~l~r~~~~~~~~~~~~~~~~~~~D~~--d~-~~~~~~~~~~d~vi~~  128 (198)
                      +++|+|.| .|++|+.++..|+++. .   +|++.+.......... ..++.+...+++  |. +.+.+++++.|+|||.
T Consensus        13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~-~~g~~~~~~~Vdadnv~~~l~aLl~~~DvVIN~   90 (480)
T 2ph5_A           13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQ-QYGVSFKLQQITPQNYLEVIGSTLEENDFLIDV   90 (480)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHH-HHTCEEEECCCCTTTHHHHTGGGCCTTCEEEEC
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHh-hcCCceeEEeccchhHHHHHHHHhcCCCEEEEC
Confidence            46899999 5999999999999874 4   7888876543321110 113455555554  44 3355677777999985


Q ss_pred             cccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeecc
Q 029125          129 VGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (198)
Q Consensus       129 ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~  167 (198)
                      +-+.            ..+.++++|.+.|+ +  |+.++
T Consensus        91 s~~~------------~~l~Im~acleaGv-~--YlDTa  114 (480)
T 2ph5_A           91 SIGI------------SSLALIILCNQKGA-L--YINAA  114 (480)
T ss_dssp             CSSS------------CHHHHHHHHHHHTC-E--EEESS
T ss_pred             Cccc------------cCHHHHHHHHHcCC-C--EEECC
Confidence            5332            23577899999886 3  44543

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.51  E-value=0.00034  Score=55.58  Aligned_cols=102  Identities=15%  Similarity=0.070  Sum_probs=69.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCccc---------ccCCCCeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~---------~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      |||.|+|+ |++|+.++..|+.++  .++.+++..+....-         ........+...+  |.    +.+++.|+|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~----~~~~~aDvV   73 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DY----SLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CH----HHhCCCCEE
Confidence            58999996 999999999998877  489999986532110         0011222333221  22    347899999


Q ss_pred             EEccccCCC----CccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          126 ISCVGGFGS----NSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       126 i~~ag~~~~----~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                      |-.||....    ..+.+..|..-...+.+.+.+.+.+-++.+-
T Consensus        74 vitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvv  117 (294)
T 2x0j_A           74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVV  117 (294)
T ss_dssp             EECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEEC
T ss_pred             EEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEe
Confidence            999996543    3556788888888889999888766554443

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=97.51  E-value=0.00068  Score=55.59  Aligned_cols=70  Identities=16%  Similarity=0.177  Sum_probs=55.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      ..+++|+|.|+ |.+|+.+++.+.+.|++|++++..+...... .  .-.++..|..|.+.+.++.+.+|+|..
T Consensus        10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~-~--ad~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A           10 KFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRY-V--AHEFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGG-G--SSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhh-h--CCEEEECCCCCHHHHHHHHHhCCccee
Confidence            35789999997 8999999999999999999998765432111 1  124667899999999999988998754

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.49  E-value=0.00018  Score=57.74  Aligned_cols=105  Identities=12%  Similarity=0.105  Sum_probs=69.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCC--CCccc------c---cCCCCeEEEEccCCCHHHHHHHhcCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSG--RSSLR------D---SWANNVIWHQGNLLSSDSWKEALDGV  122 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~--~~~~~------~---~~~~~~~~~~~D~~d~~~~~~~~~~~  122 (198)
                      ++++|.|+|+ |.+|..++..|+..|+ +|+++++++  .....      .   .......+...+  |    .+.++++
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d----~~a~~~a   79 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--D----YADTADS   79 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--C----GGGGTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--C----HHHhCCC
Confidence            3568999997 9999999999999999 999999973  21100      0   000111222111  1    2467899


Q ss_pred             CEEEEccccCCCC----ccceehhhHHHHHHHHHHHHcCCC-EEEEeec
Q 029125          123 TAVISCVGGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYISA  166 (198)
Q Consensus       123 d~vi~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~Ss  166 (198)
                      |+||.++|....+    .+.+..|..-...+++.+.+.+.. .++.+|.
T Consensus        80 DvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN  128 (315)
T 3tl2_A           80 DVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN  128 (315)
T ss_dssp             SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence            9999999864432    345667777777888888777655 4555553

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.49  E-value=9e-05  Score=58.65  Aligned_cols=74  Identities=9%  Similarity=0.153  Sum_probs=52.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccc--ccC---CCCeEEEEccCCCHHHHHHHhcCCCEEE
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR--DSW---ANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~--~~~---~~~~~~~~~D~~d~~~~~~~~~~~d~vi  126 (198)
                      ..++++++|+|+ |++|+.++..|++.|. +|++++|+.++...  ...   ...+.+...++   +++.+.+++.|+||
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~---~~l~~~l~~~DiVI  199 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVIAAADGVV  199 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS---TTHHHHHHHSSEEE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH---HHHHHHHhcCCEEE
Confidence            356789999998 8999999999999998 79999998654211  000   11223333343   34556677899999


Q ss_pred             Eccc
Q 029125          127 SCVG  130 (198)
Q Consensus       127 ~~ag  130 (198)
                      ++..
T Consensus       200 naTp  203 (283)
T 3jyo_A          200 NATP  203 (283)
T ss_dssp             ECSS
T ss_pred             ECCC
Confidence            9875

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.48  E-value=6.1e-05  Score=62.01  Aligned_cols=74  Identities=20%  Similarity=0.181  Sum_probs=54.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc--cccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ..+++|+|+|+ |.+|..+++.+...|++|++.+|++.+..  .......+.   .+..+.+++.+.++++|+||.+++.
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~---~~~~~~~~l~~~l~~aDvVi~~~~~  241 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIH---TRYSSAYELEGAVKRADLVIGAVLV  241 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSE---EEECCHHHHHHHHHHCSEEEECCCC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeE---eccCCHHHHHHHHcCCCEEEECCCc
Confidence            45789999998 99999999999999999999999764421  111122221   2334566788888899999998874

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.48  E-value=0.00059  Score=55.12  Aligned_cols=106  Identities=15%  Similarity=0.099  Sum_probs=71.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCccc------c--cCCCCeEEEEccCCCHHHHHHHhcCCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------D--SWANNVIWHQGNLLSSDSWKEALDGVT  123 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~------~--~~~~~~~~~~~D~~d~~~~~~~~~~~d  123 (198)
                      ...++|.|+|+ |.+|..++..|+.+|.  +|++++++..+...      .  .+......+..+  |.    +.++++|
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~----~~~~~aD   89 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DY----SVTANSK   89 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SG----GGGTTEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CH----HHhCCCC
Confidence            45679999997 9999999999999986  89999987532110      0  011122222221  22    2488999


Q ss_pred             EEEEccccCCC----CccceehhhHHHHHHHHHHHHcCCC-EEEEeec
Q 029125          124 AVISCVGGFGS----NSYMYKINGTANINAIRAASEKGVK-RFVYISA  166 (198)
Q Consensus       124 ~vi~~ag~~~~----~~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~Ss  166 (198)
                      +||.++|....    ..+.+..|..-...+.+.+.+.+.. .++.+|.
T Consensus        90 iVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN  137 (331)
T 4aj2_A           90 LVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN  137 (331)
T ss_dssp             EEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            99999996432    3456778888778888888887655 4555553

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.45  E-value=0.00058  Score=54.85  Aligned_cols=103  Identities=13%  Similarity=0.161  Sum_probs=66.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCccc------c--cCCCCeEEEEccCCCHHHHHHHhcCCCE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------D--SWANNVIWHQGNLLSSDSWKEALDGVTA  124 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~------~--~~~~~~~~~~~D~~d~~~~~~~~~~~d~  124 (198)
                      ++++|.|+|| |.+|..++..|+..+.  ++.++++++.+...      .  .....+.+.. |  +    .++++++|+
T Consensus         4 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv   75 (318)
T 1ez4_A            4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKDADL   75 (318)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCE
Confidence            3479999998 9999999999998875  89999986432110      0  0113334332 2  1    345889999


Q ss_pred             EEEccccCCCC----ccceehhhHHHHHHHHHHHHcCCC-EEEEee
Q 029125          125 VISCVGGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYIS  165 (198)
Q Consensus       125 vi~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~S  165 (198)
                      ||.++|....+    ...+..|..-...+++.+.+.+.. .++.+|
T Consensus        76 Vii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           76 VVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             EEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            99999864322    344566777777788888777654 445444

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.43  E-value=0.00047  Score=58.18  Aligned_cols=98  Identities=18%  Similarity=0.345  Sum_probs=70.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEccccC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVGGF  132 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag~~  132 (198)
                      ..++|+|.|| |.+|.++++.| +++++|.++.+++.+... ....++..++.+|-+|++-+.+. +++.|++|-..+- 
T Consensus       234 ~~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~~-  310 (461)
T 4g65_A          234 PYRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIALTNE-  310 (461)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEECCSC-
T ss_pred             cccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEcccC-
Confidence            3578999997 99999999987 456899999887554211 11235788999999999988875 6789999886642 


Q ss_pred             CCCccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       133 ~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                            -+.|+..++    .|++.|+++.+-.-
T Consensus       311 ------De~Ni~~~l----lAk~~gv~kvIa~v  333 (461)
T 4g65_A          311 ------DETNIMSAM----LAKRMGAKKVMVLI  333 (461)
T ss_dssp             ------HHHHHHHHH----HHHHTTCSEEEEEC
T ss_pred             ------cHHHHHHHH----HHHHcCCccccccc
Confidence                  124554443    56678888776443

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.42  E-value=0.00047  Score=55.31  Aligned_cols=102  Identities=13%  Similarity=0.083  Sum_probs=68.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCccc------c---cCCCCeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------D---SWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~------~---~~~~~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      |+|.|+|+ |.+|..++..|+..|.  +|+++++++.+...      .   ....+..+...|  +    .+.++++|+|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aDvV   73 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSDVC   73 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCCEE
Confidence            58999997 9999999999999886  99999998754110      0   001223333222  1    3467899999


Q ss_pred             EEccccCCC----CccceehhhHHHHHHHHHHHHcCCC-EEEEee
Q 029125          126 ISCVGGFGS----NSYMYKINGTANINAIRAASEKGVK-RFVYIS  165 (198)
Q Consensus       126 i~~ag~~~~----~~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~S  165 (198)
                      |.++|....    ..+.+..|..-...+.+.+.+.+.. .++.+|
T Consensus        74 ii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  118 (314)
T 3nep_X           74 IITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA  118 (314)
T ss_dssp             EECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred             EECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence            999986432    3445677777777888888877655 445554

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.41  E-value=0.00011  Score=58.03  Aligned_cols=72  Identities=14%  Similarity=0.166  Sum_probs=48.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCC----CeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWAN----NVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~----~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      .++++++|+|+ |++|++++..|++.| +|++.+|+..+...  .....    .. .+.+|+.+.   .+.+.++|+||+
T Consensus       126 l~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~-~~~~d~~~~---~~~~~~~DilVn  199 (287)
T 1nvt_A          126 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKF-GEEVKFSGL---DVDLDGVDIIIN  199 (287)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCH-HHHEEEECT---TCCCTTCCEEEE
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccccc-ceeEEEeeH---HHhhCCCCEEEE
Confidence            45789999998 599999999999999 99999997543111  00000    00 012233331   344568999999


Q ss_pred             cccc
Q 029125          128 CVGG  131 (198)
Q Consensus       128 ~ag~  131 (198)
                      |++.
T Consensus       200 ~ag~  203 (287)
T 1nvt_A          200 ATPI  203 (287)
T ss_dssp             CSCT
T ss_pred             CCCC
Confidence            9984

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=97.40  E-value=0.0015  Score=53.47  Aligned_cols=87  Identities=17%  Similarity=0.293  Sum_probs=50.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHH-CCC---eEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALD-RGL---TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~-~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      |++|.|.||+|.+|+.+++.++. +++   +++.+..+......... .+......|..|++.    ++++|+||.+.|.
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~~v~~~-~g~~i~~~~~~~~~~----~~~~DvVf~a~g~   75 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSF-GGTTGTLQDAFDLEA----LKALDIIVTCQGG   75 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGG-GTCCCBCEETTCHHH----HHTCSEEEECSCH
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCCCcccc-CCCceEEEecCChHH----hcCCCEEEECCCc
Confidence            46899999999999999995544 443   55666543211111001 111222224444544    3589999999873


Q ss_pred             CCCCccceehhhHHHHHHHHHHHHcCCC
Q 029125          132 FGSNSYMYKINGTANINAIRAASEKGVK  159 (198)
Q Consensus       132 ~~~~~~~~~~n~~~~~~~~~a~~~~~~~  159 (198)
                                  ..+...+..+.+.|.+
T Consensus        76 ------------~~s~~~a~~~~~~G~k   91 (367)
T 1t4b_A           76 ------------DYTNEIYPKLRESGWQ   91 (367)
T ss_dssp             ------------HHHHHHHHHHHHTTCC
T ss_pred             ------------hhHHHHHHHHHHCCCC
Confidence                        2223445556666764

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.39  E-value=0.00027  Score=57.26  Aligned_cols=73  Identities=12%  Similarity=0.127  Sum_probs=49.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCH---HHHHHHh--cCCCEEEEcc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSS---DSWKEAL--DGVTAVISCV  129 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~---~~~~~~~--~~~d~vi~~a  129 (198)
                      .++|+|+||+|.+|...++.+...|++|+++++++.+... ..... -.++  |..+.   +.+.++.  +++|++|+++
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga-~~~~--~~~~~~~~~~v~~~~~~~g~D~vid~~  241 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGA-AHVL--NEKAPDFEATLREVMKAEQPRIFLDAV  241 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTC-SEEE--ETTSTTHHHHHHHHHHHHCCCEEEESS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC-CEEE--ECCcHHHHHHHHHHhcCCCCcEEEECC
Confidence            3789999999999999999998899999999987654211 11111 1233  44332   2333333  3799999999


Q ss_pred             cc
Q 029125          130 GG  131 (198)
Q Consensus       130 g~  131 (198)
                      |.
T Consensus       242 g~  243 (349)
T 3pi7_A          242 TG  243 (349)
T ss_dssp             CH
T ss_pred             CC
Confidence            84

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.39  E-value=0.00055  Score=54.36  Aligned_cols=37  Identities=24%  Similarity=0.444  Sum_probs=33.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      .+++|.|+||.|.+|..++..|.+.|++|++.+|++.
T Consensus        20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~   56 (298)
T 2pv7_A           20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW   56 (298)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence            3568999998899999999999999999999998753

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.39  E-value=0.00093  Score=54.09  Aligned_cols=91  Identities=16%  Similarity=0.139  Sum_probs=55.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC---CeEEEeecCCCC-cccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRS-SLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g---~~V~~l~r~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      +++|.|.||+|.+|+.+++.|.+++   .+++.+...... .........+.+.  |+ |++    .++++|+||.+.|.
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~~--~~-~~~----~~~~vDvVf~a~g~   75 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQ--NV-EEF----DWSQVHIALFSAGG   75 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEEE--EG-GGC----CGGGCSEEEECSCH
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEEe--cC-ChH----HhcCCCEEEECCCc
Confidence            5789999999999999999999873   467766632111 1111111122222  22 122    34689999999874


Q ss_pred             CCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       132 ~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      .            .+...+..+.+.|. ++|-.|+
T Consensus        76 ~------------~s~~~a~~~~~~G~-~vId~s~   97 (336)
T 2r00_A           76 E------------LSAKWAPIAAEAGV-VVIDNTS   97 (336)
T ss_dssp             H------------HHHHHHHHHHHTTC-EEEECSS
T ss_pred             h------------HHHHHHHHHHHcCC-EEEEcCC
Confidence            2            23455666667776 5666665

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.38  E-value=0.00034  Score=57.19  Aligned_cols=92  Identities=18%  Similarity=0.289  Sum_probs=56.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCcccc-----cCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRD-----SWANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~~-----~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      +++|.|.||+|.+|+.+++.|.+++ .+++.+..........     .+...+   ..|+.-.+  .+.++++|+||.++
T Consensus        16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v---~~dl~~~~--~~~~~~vDvVf~at   90 (359)
T 1xyg_A           16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQK---LPTLVSVK--DADFSTVDAVFCCL   90 (359)
T ss_dssp             CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSC---CCCCBCGG--GCCGGGCSEEEECC
T ss_pred             CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcc---cccceecc--hhHhcCCCEEEEcC
Confidence            3689999999999999999999886 4888776543221110     011111   12332222  33456899999998


Q ss_pred             ccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          130 GGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       130 g~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      +...            +...+..+ +.|. ++|-.|+
T Consensus        91 p~~~------------s~~~a~~~-~aG~-~VId~sa  113 (359)
T 1xyg_A           91 PHGT------------TQEIIKEL-PTAL-KIVDLSA  113 (359)
T ss_dssp             CTTT------------HHHHHHTS-CTTC-EEEECSS
T ss_pred             Cchh------------HHHHHHHH-hCCC-EEEECCc
Confidence            7532            23445555 6666 5776766

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.37  E-value=0.0011  Score=51.24  Aligned_cols=97  Identities=11%  Similarity=0.088  Sum_probs=63.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCC-------------------CCccc-----ccCCC--CeEEEEc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSG-------------------RSSLR-----DSWAN--NVIWHQG  107 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~-------------------~~~~~-----~~~~~--~~~~~~~  107 (198)
                      ..++|+|.|+ |++|..+++.|+..|. ++++++++.                   .+...     ....+  .+..+..
T Consensus        30 ~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~  108 (249)
T 1jw9_B           30 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA  108 (249)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             hCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence            4578999997 9999999999999996 899999875                   11000     00112  3445555


Q ss_pred             cCCCHHHHHHHhcCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          108 NLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       108 D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                      ++. .+.+.++++++|+||.+....           ..-..+.+.|.+.++. +|+.+
T Consensus       109 ~~~-~~~~~~~~~~~DvVi~~~d~~-----------~~~~~l~~~~~~~~~p-~i~~~  153 (249)
T 1jw9_B          109 LLD-DAELAALIAEHDLVLDCTDNV-----------AVRNQLNAGCFAAKVP-LVSGA  153 (249)
T ss_dssp             CCC-HHHHHHHHHTSSEEEECCSSH-----------HHHHHHHHHHHHHTCC-EEEEE
T ss_pred             cCC-HhHHHHHHhCCCEEEEeCCCH-----------HHHHHHHHHHHHcCCC-EEEee
Confidence            565 456777889999999976421           1223455666666653 44433

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.36  E-value=0.0011  Score=52.86  Aligned_cols=101  Identities=17%  Similarity=0.170  Sum_probs=61.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCccc------cc--CCCCeEEEEccCCCHHHHHHHhcCCCEEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------DS--WANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~------~~--~~~~~~~~~~D~~d~~~~~~~~~~~d~vi  126 (198)
                      ++|.|+|+ |.+|..++..|+..|+  +|+++++++.+...      ..  ......+.. +  +.    +.++++|+||
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~-~--~~----~a~~~aDvVI   72 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH-G--GH----SELADAQVVI   72 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE-E--CG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE-C--CH----HHhCCCCEEE
Confidence            48999998 9999999999999998  99999987542110      00  011223322 1  22    3578999999


Q ss_pred             EccccCCC----CccceehhhHHHHHHHHHHHHcCCC-EEEEee
Q 029125          127 SCVGGFGS----NSYMYKINGTANINAIRAASEKGVK-RFVYIS  165 (198)
Q Consensus       127 ~~ag~~~~----~~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~S  165 (198)
                      .+++....    ..+....|......+++.+.+.... .++.+|
T Consensus        73 i~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t  116 (304)
T 2v6b_A           73 LTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS  116 (304)
T ss_dssp             ECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred             EcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            99975432    2334456666666777777665544 344444

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.34  E-value=0.00032  Score=57.39  Aligned_cols=75  Identities=17%  Similarity=0.206  Sum_probs=49.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHh--cCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL--DGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--~~~d~vi~~ag~  131 (198)
                      ..+.+|+|+||+|.+|...++.+...|.+|++.++....+........ .++  |..+.+..+.+.  .++|+||.++|.
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~-~v~--~~~~~~~~~~~~~~~g~D~vid~~g~  258 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGAD-DVI--DYKSGSVEEQLKSLKPFDFILDNVGG  258 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCS-EEE--ETTSSCHHHHHHTSCCBSEEEESSCT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHcCCC-EEE--ECCchHHHHHHhhcCCCCEEEECCCC
Confidence            456799999999999999999998899999988843211111111111 222  444433223332  479999999884

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.34  E-value=0.002  Score=52.72  Aligned_cols=70  Identities=16%  Similarity=0.243  Sum_probs=40.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC---eEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      +++|.|.||||++|+.|++.|.++++   ++..+.-.......... .+.....-++. .+    .++++|+||.+++.
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~-~~~~~~~~~~~-~~----~~~~~Dvvf~a~~~   74 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKF-KDQDITIEETT-ET----AFEGVDIALFSAGS   74 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEE-TTEEEEEEECC-TT----TTTTCSEEEECSCH
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCccee-cCCCceEeeCC-HH----HhcCCCEEEECCCh
Confidence            46899999999999999999888765   44444422111100001 11111111222 11    25689999998863

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.33  E-value=0.0016  Score=52.42  Aligned_cols=103  Identities=15%  Similarity=0.215  Sum_probs=64.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccc------c---cCCCCeEEEE-ccCCCHHHHHHHhcCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR------D---SWANNVIWHQ-GNLLSSDSWKEALDGVT  123 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~------~---~~~~~~~~~~-~D~~d~~~~~~~~~~~d  123 (198)
                      .+++|.|+|| |.+|..++..|+..|+ +|+++++++.+...      .   .......+.. .|      + ++++++|
T Consensus         3 ~~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d------~-~al~~aD   74 (322)
T 1t2d_A            3 PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT------Y-DDLAGAD   74 (322)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC------G-GGGTTCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCC------H-HHhCCCC
Confidence            3568999998 9999999999999997 99999987643110      0   0011112211 22      3 4588999


Q ss_pred             EEEEccccCCCC---------ccceehhhHHHHHHHHHHHHcCCC-EEEEee
Q 029125          124 AVISCVGGFGSN---------SYMYKINGTANINAIRAASEKGVK-RFVYIS  165 (198)
Q Consensus       124 ~vi~~ag~~~~~---------~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~S  165 (198)
                      +||.++|....+         ......|..-...+.+.+.+...+ .++++|
T Consensus        75 ~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  126 (322)
T 1t2d_A           75 VVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  126 (322)
T ss_dssp             EEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999999854322         122334444555666666665544 344444

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=97.32  E-value=0.0015  Score=53.42  Aligned_cols=68  Identities=22%  Similarity=0.303  Sum_probs=53.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      |++|+|+|+ |.+|+.+++.+.+.|++|++++..+...... ...  .++..|..|.+.+.++.+++|+|+.
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~-~~~--~~~~~~~~d~~~l~~~~~~~d~v~~   68 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQ-VAD--EQIVAGFFDSERIEDLVKGSDVTTY   68 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTGG-GSS--EEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhh-hCc--eEEECCCCCHHHHHHHHhcCCEEEe
Confidence            578999997 7899999999999999999998754331111 111  3567899999999988889999886

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=97.32  E-value=0.00098  Score=55.17  Aligned_cols=70  Identities=20%  Similarity=0.247  Sum_probs=54.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      ++++|+|.|+ |.+|+.+++.+.+.|++|++++ .+.... .........+.+|..|.+.+.++.+.+|+|+.
T Consensus        23 ~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~-~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~   92 (403)
T 3k5i_A           23 NSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPA-KQISAHDGHVTGSFKEREAVRQLAKTCDVVTA   92 (403)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTT-GGGCCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcH-HHhccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence            4679999997 8999999999999999999999 543321 11122224577899999999999999998864

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.31  E-value=4.5e-05  Score=65.45  Aligned_cols=97  Identities=18%  Similarity=0.206  Sum_probs=56.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHH-HhcCCCEEEEccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKE-ALDGVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~-~~~~~d~vi~~ag  130 (198)
                      .++++++|||| |++|++++..|++.|++|++++|+..+...  .....  .++  ++.|   +.+ ....+|+||||+|
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~--~~~--~~~d---l~~~~~~~~DilVN~ag  433 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGG--KAL--SLTD---LDNYHPEDGMVLANTTS  433 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC---CE--ETTT---TTTC--CCSEEEEECSS
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC--cee--eHHH---hhhccccCceEEEECCC
Confidence            35678999999 799999999999999999999997543211  11111  112  2222   111 1235899999998


Q ss_pred             cCCC---------------CccceehhhHHHH-HHHHHHHHcCC
Q 029125          131 GFGS---------------NSYMYKINGTANI-NAIRAASEKGV  158 (198)
Q Consensus       131 ~~~~---------------~~~~~~~n~~~~~-~~~~a~~~~~~  158 (198)
                      ....               +...+++|+.+.. .+++.+++.|.
T Consensus       434 vg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~T~ll~~a~~~G~  477 (523)
T 2o7s_A          434 MGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGA  477 (523)
T ss_dssp             TTCTTCTTCCSSCTTTGGGEEEEEECCCSSSSCHHHHHHHTTTC
T ss_pred             CCCCCCCCCCCCChHHcCcCcEEEEEeeCCccCHHHHHHHHCCC
Confidence            5210               1234566654432 45666665554

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.30  E-value=0.00093  Score=53.84  Aligned_cols=103  Identities=12%  Similarity=0.146  Sum_probs=66.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCccc------c--cCCCCeEEEEccCCCHHHHHHHhcCCCE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------D--SWANNVIWHQGNLLSSDSWKEALDGVTA  124 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~------~--~~~~~~~~~~~D~~d~~~~~~~~~~~d~  124 (198)
                      ++++|.|+|| |.+|..++..|+..+.  ++.++++++.+...      .  ....++.+.. |  +    .++++++|+
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~~aDv   79 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YSDAKDADL   79 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGGGCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCE
Confidence            4579999998 9999999999988775  89999986532110      0  0112333332 2  2    345889999


Q ss_pred             EEEccccCCCC----ccceehhhHHHHHHHHHHHHcCCC-EEEEee
Q 029125          125 VISCVGGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYIS  165 (198)
Q Consensus       125 vi~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~S  165 (198)
                      ||..+|....+    ......|..-...+++.+.+.+.. .++.+|
T Consensus        80 Vii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  125 (326)
T 2zqz_A           80 VVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             EEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            99999864332    234456666666777777776644 455554

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=97.30  E-value=0.00075  Score=56.21  Aligned_cols=70  Identities=24%  Similarity=0.210  Sum_probs=55.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      ..+++|+|.|+ |.+|+.++..+.+.|++|++++..+...... ..  -..+..|+.|.+.+.++.+++|+|+.
T Consensus        33 ~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~-~a--d~~~~~~~~d~~~l~~~a~~~D~V~~  102 (419)
T 4e4t_A           33 LPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGA-VA--DRHLRAAYDDEAALAELAGLCEAVST  102 (419)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHH-HS--SEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhh-hC--CEEEECCcCCHHHHHHHHhcCCEEEE
Confidence            35679999997 8999999999999999999998654431111 11  14566899999999999999999984

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.29  E-value=0.0012  Score=52.94  Aligned_cols=102  Identities=11%  Similarity=0.111  Sum_probs=66.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCccc---------ccCCCCeEEEEccCCCHHHHHHHhcCCCE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALDGVTA  124 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~---------~~~~~~~~~~~~D~~d~~~~~~~~~~~d~  124 (198)
                      +++|.|+|+ |.+|..++..|+.+|  .+|.++++++.+...         ......+.+.. |  +    .++++++|+
T Consensus         6 ~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~~~aDv   77 (317)
T 3d0o_A            6 GNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDCHDADL   77 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHhCCCCE
Confidence            469999998 999999999999888  489999986532110         00112333332 2  2    345889999


Q ss_pred             EEEccccCCCC----ccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          125 VISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       125 vi~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                      ||.++|....+    ......|..-...+++.+.+.+..-++.+.
T Consensus        78 Vvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~  122 (317)
T 3d0o_A           78 VVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVA  122 (317)
T ss_dssp             EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             EEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEe
Confidence            99999865432    123455666666777777776655444333

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.28  E-value=0.00022  Score=59.70  Aligned_cols=39  Identities=18%  Similarity=0.233  Sum_probs=34.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      ..+++|+|+||+|.+|...++.+...|.+|+++++++.+
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~  257 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQK  257 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence            457899999999999999999999999999999876443

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.26  E-value=0.00014  Score=58.27  Aligned_cols=75  Identities=24%  Similarity=0.252  Sum_probs=52.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ..+.+|+|+||+|.+|...++.+...|++|+++++..+.......... .+  .|..+.+.+.+.++++|++|.+.|.
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa~-~~--i~~~~~~~~~~~~~g~D~v~d~~g~  225 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALGAE-QC--INYHEEDFLLAISTPVDAVIDLVGG  225 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTCS-EE--EETTTSCHHHHCCSCEEEEEESSCH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcCCC-EE--EeCCCcchhhhhccCCCEEEECCCc
Confidence            456799999999999999999999999999988754321111111111 22  3555544466667899999999884

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.26  E-value=0.00041  Score=55.94  Aligned_cols=75  Identities=21%  Similarity=0.164  Sum_probs=50.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCH---HHHHHHhcCCCEEEEccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSS---DSWKEALDGVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~~~~d~vi~~ag  130 (198)
                      ..+++|+|+|+ |.+|..+++.+...|++|+++++++.+..... .-+... ..|..+.   +.+.++..++|+||+++|
T Consensus       163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~-~~d~~~~~~~~~~~~~~~~~d~vid~~g  239 (339)
T 1rjw_A          163 KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADL-VVNPLKEDAAKFMKEKVGGVHAAVVTAV  239 (339)
T ss_dssp             CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSE-EECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCE-EecCCCccHHHHHHHHhCCCCEEEECCC
Confidence            35679999999 78999999999999999999998754321110 112221 2355543   233333367999999998


Q ss_pred             c
Q 029125          131 G  131 (198)
Q Consensus       131 ~  131 (198)
                      .
T Consensus       240 ~  240 (339)
T 1rjw_A          240 S  240 (339)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.25  E-value=0.0013  Score=50.80  Aligned_cols=72  Identities=24%  Similarity=0.272  Sum_probs=46.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHC-CCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHh-----cCCCEEEEccc
Q 029125           57 EKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL-----DGVTAVISCVG  130 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-----~~~d~vi~~ag  130 (198)
                      ++|+|+|++|.+|+.+++.+.+. +++++............ ...+.. +..|++.++...+.+     .++++|+-+.|
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~-~~~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~VigTTG   78 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLL-TDGNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG   78 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHH-HHTTCC-EEEECSCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHH-hccCCc-EEEEccChHHHHHHHHHHHHcCCCEEEcCCC
Confidence            47999999999999999999876 88888665433221110 111223 445777766555433     26788877665

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=97.25  E-value=0.0013  Score=46.34  Aligned_cols=88  Identities=17%  Similarity=0.286  Sum_probs=53.4

Q ss_pred             CCCCeEEEEcCC---chhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           54 PPSEKLLVLGGN---GFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGat---G~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ...++|.|.|++   |.+|..+++.|++.|++|+..+++... .     .++.++       .++.++.+.+|+++-+..
T Consensus        12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~-i-----~G~~~~-------~s~~el~~~vDlvii~vp   78 (138)
T 1y81_A           12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE-I-----EGLKCY-------RSVRELPKDVDVIVFVVP   78 (138)
T ss_dssp             --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE-E-----TTEECB-------SSGGGSCTTCCEEEECSC
T ss_pred             cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCe-E-----CCeeec-------CCHHHhCCCCCEEEEEeC
Confidence            356789999997   889999999999999998877665321 1     122211       112233346787777653


Q ss_pred             cCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          131 GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       131 ~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      .            .....+++.+.+.+++.++..++
T Consensus        79 ~------------~~v~~v~~~~~~~g~~~i~~~~~  102 (138)
T 1y81_A           79 P------------KVGLQVAKEAVEAGFKKLWFQPG  102 (138)
T ss_dssp             H------------HHHHHHHHHHHHTTCCEEEECTT
T ss_pred             H------------HHHHHHHHHHHHcCCCEEEEcCc
Confidence            2            22234455555667766655544

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.25  E-value=0.00079  Score=54.79  Aligned_cols=92  Identities=16%  Similarity=0.164  Sum_probs=56.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEee--cC-CCCcccccCC-----------CCeEEEEccCCCHHHHHHHh
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLS--RS-GRSSLRDSWA-----------NNVIWHQGNLLSSDSWKEAL  119 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~--r~-~~~~~~~~~~-----------~~~~~~~~D~~d~~~~~~~~  119 (198)
                      ++++|.|.||+|.+|+.+++.|.++. .+++.+.  ++ ..+......+           ..+.+  .|+ |++.    +
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~-d~~~----~   75 (350)
T 2ep5_A            3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPI--VST-NYED----H   75 (350)
T ss_dssp             CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBE--ECS-SGGG----G
T ss_pred             CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEE--eeC-CHHH----h
Confidence            35789999999999999999998775 4787775  22 1111110000           11122  222 3332    3


Q ss_pred             cCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          120 DGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       120 ~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      +++|+||.+.+..            .+..++..+.+.|.+ +|-.|+
T Consensus        76 ~~vDvVf~atp~~------------~s~~~a~~~~~aG~~-VId~s~  109 (350)
T 2ep5_A           76 KDVDVVLSALPNE------------LAESIELELVKNGKI-VVSNAS  109 (350)
T ss_dssp             TTCSEEEECCCHH------------HHHHHHHHHHHTTCE-EEECSS
T ss_pred             cCCCEEEECCChH------------HHHHHHHHHHHCCCE-EEECCc
Confidence            6899999887642            234567777777874 666655

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=97.24  E-value=0.0027  Score=52.06  Aligned_cols=70  Identities=17%  Similarity=0.182  Sum_probs=54.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      ..+++|+|.|+ |.+|+.+++.+.+.|++|++++..+...... .  .-..+..|..|.+.+.++.+.+|+|..
T Consensus        12 ~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~-~--ad~~~~~~~~d~~~l~~~~~~~dvI~~   81 (389)
T 3q2o_A           12 LPGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPCAQ-V--ADIEIVASYDDLKAIQHLAEISDVVTY   81 (389)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTTT-T--CSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchHH-h--CCceEecCcCCHHHHHHHHHhCCEeee
Confidence            35789999997 8899999999999999999998765432111 1  113556899999999999999998854

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.24  E-value=0.00027  Score=57.17  Aligned_cols=74  Identities=22%  Similarity=0.208  Sum_probs=49.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCC--HHHHHHHh-cCCCEEEEccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLS--SDSWKEAL-DGVTAVISCVG  130 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d--~~~~~~~~-~~~d~vi~~ag  130 (198)
                      .+.+|+|+||+|.+|...++.+...|++|+++++++.+... ...... .++  |..+  .+.+.++. +++|+||+++|
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~-~vi--~~~~~~~~~~~~~~~~g~Dvv~d~~g  226 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGAD-IVL--NHKESLLNQFKTQGIELVDYVFCTFN  226 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCS-EEE--CTTSCHHHHHHHHTCCCEEEEEESSC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCc-EEE--ECCccHHHHHHHhCCCCccEEEECCC
Confidence            56899999999999999999999999999999986543111 111111 222  3322  23343432 26899999987


Q ss_pred             c
Q 029125          131 G  131 (198)
Q Consensus       131 ~  131 (198)
                      .
T Consensus       227 ~  227 (346)
T 3fbg_A          227 T  227 (346)
T ss_dssp             H
T ss_pred             c
Confidence            4

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.22  E-value=7.9e-05  Score=58.56  Aligned_cols=71  Identities=17%  Similarity=0.200  Sum_probs=47.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCC--CCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWA--NNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~--~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      ..+++++|+|+ |++|++++..|++.|++|++.+|+.++...  ....  ..+..  .|+   +++.+  .++|+||+++
T Consensus       117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~--~~~---~~~~~--~~~DivIn~t  188 (272)
T 1p77_A          117 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQA--VSM---DSIPL--QTYDLVINAT  188 (272)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEE--EEG---GGCCC--SCCSEEEECC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEE--eeH---HHhcc--CCCCEEEECC
Confidence            46789999998 889999999999999999999998643211  1000  12222  232   11110  3799999999


Q ss_pred             ccC
Q 029125          130 GGF  132 (198)
Q Consensus       130 g~~  132 (198)
                      +..
T Consensus       189 ~~~  191 (272)
T 1p77_A          189 SAG  191 (272)
T ss_dssp             CC-
T ss_pred             CCC
Confidence            753

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.22  E-value=0.001  Score=54.19  Aligned_cols=92  Identities=18%  Similarity=0.176  Sum_probs=55.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCC---cccccCC-----------CCeEEEEccCCCHHHHHHHhc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRS---SLRDSWA-----------NNVIWHQGNLLSSDSWKEALD  120 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~---~~~~~~~-----------~~~~~~~~D~~d~~~~~~~~~  120 (198)
                      +++|.|.||+|.+|+.+++.|.+++ .+|+.+.++...   .......           ..+.+...   |.+   ++++
T Consensus         8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~   81 (354)
T 1ys4_A            8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPT---DPK---HEEF   81 (354)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEES---CTT---SGGG
T ss_pred             cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeC---CHH---HHhc
Confidence            3689999999999999999998875 588888653221   1110000           01111111   222   2346


Q ss_pred             -CCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          121 -GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       121 -~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                       ++|+||.+.+..            ....++..+.+.|. ++|-.|+
T Consensus        82 ~~~DvV~~atp~~------------~~~~~a~~~~~aG~-~VId~s~  115 (354)
T 1ys4_A           82 EDVDIVFSALPSD------------LAKKFEPEFAKEGK-LIFSNAS  115 (354)
T ss_dssp             TTCCEEEECCCHH------------HHHHHHHHHHHTTC-EEEECCS
T ss_pred             CCCCEEEECCCch------------HHHHHHHHHHHCCC-EEEECCc
Confidence             899999988642            22345666667776 4665655

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.21  E-value=0.00043  Score=56.28  Aligned_cols=73  Identities=22%  Similarity=0.114  Sum_probs=53.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-c-cCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-D-SWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      .+.+|+|+|+ |.+|...++.+...|.+|+++++++.+... . ..... .+  .|..+.+.+.++..++|+||.++|.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~-~v--i~~~~~~~~~~~~~g~D~vid~~g~  254 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGAD-DY--VIGSDQAKMSELADSLDYVIDTVPV  254 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCS-CE--EETTCHHHHHHSTTTEEEEEECCCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCc-ee--eccccHHHHHHhcCCCCEEEECCCC
Confidence            5679999996 999999998888889999999987654221 1 22111 22  2555666676666789999999984

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.21  E-value=0.0023  Score=51.29  Aligned_cols=103  Identities=14%  Similarity=0.253  Sum_probs=65.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCccc------c---cCCCCeEEEEccCCCHHHHHHHhcCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------D---SWANNVIWHQGNLLSSDSWKEALDGVT  123 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~------~---~~~~~~~~~~~D~~d~~~~~~~~~~~d  123 (198)
                      .+++|.|+|+ |.+|..++..|+..|.  +|+++++++.....      .   .....+.+.. |  +    .++++++|
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~----~~al~~aD   76 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--D----YDDCRDAD   76 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--C----GGGTTTCS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--c----HHHhCCCC
Confidence            4579999998 9999999999988774  89999987532110      0   0111333332 2  1    24588999


Q ss_pred             EEEEccccCCCC----ccceehhhHHHHHHHHHHHHcCCCE-EEEee
Q 029125          124 AVISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKR-FVYIS  165 (198)
Q Consensus       124 ~vi~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~~-~v~~S  165 (198)
                      +||.+++....+    ......|..-...+++.+.+..... ++++|
T Consensus        77 vViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~t  123 (316)
T 1ldn_A           77 LVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (316)
T ss_dssp             EEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             EEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeC
Confidence            999999864422    2334455555556777777765543 44443

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.19  E-value=0.00015  Score=59.12  Aligned_cols=71  Identities=23%  Similarity=0.237  Sum_probs=49.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC---CCcccccCCCCeEEEEccCCC--HHHHHHHhcCCCEEEEccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG---RSSLRDSWANNVIWHQGNLLS--SDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~---~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~d~vi~~ag  130 (198)
                      +++|+|+|+ |.+|..+++.+...|++|+++++++   .+. +....-++..+  | .+  .+.+.+.-.++|+||+++|
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~~~~ga~~v--~-~~~~~~~~~~~~~~~d~vid~~g  255 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQ-TVIEETKTNYY--N-SSNGYDKLKDSVGKFDVIIDATG  255 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHH-HHHHHHTCEEE--E-CTTCSHHHHHHHCCEEEEEECCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHH-HHHHHhCCcee--c-hHHHHHHHHHhCCCCCEEEECCC
Confidence            789999999 9999999999998999999999876   331 11111133433  4 43  2233331257999999998


Q ss_pred             c
Q 029125          131 G  131 (198)
Q Consensus       131 ~  131 (198)
                      .
T Consensus       256 ~  256 (366)
T 2cdc_A          256 A  256 (366)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=97.18  E-value=0.0034  Score=51.50  Aligned_cols=70  Identities=23%  Similarity=0.337  Sum_probs=41.9

Q ss_pred             CCCeEEEEcCCchhHHHHHH-HHHHCC---CeEEEeecCC-CCcccccCCC-CeEEEEccCCCHHHHHHHhcCCCEEEEc
Q 029125           55 PSEKLLVLGGNGFVGSHICR-EALDRG---LTVASLSRSG-RSSLRDSWAN-NVIWHQGNLLSSDSWKEALDGVTAVISC  128 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~-~l~~~g---~~V~~l~r~~-~~~~~~~~~~-~~~~~~~D~~d~~~~~~~~~~~d~vi~~  128 (198)
                      .+++|.|.||||++|+.|++ .|.++.   .++..+.-+. .+.... +.. ...+  .++.+.+.    ++++|+||.+
T Consensus         3 ~~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~-~~~~~~~v--~~~~~~~~----~~~vDvvf~a   75 (377)
T 3uw3_A            3 GSMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGKAPS-FAKNETTL--KDATSIDD----LKKCDVIITC   75 (377)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTTSBCCT-TCCSCCBC--EETTCHHH----HHTCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcCCCHHH-cCCCceEE--EeCCChhH----hcCCCEEEEC
Confidence            35689999999999999999 666655   3666554331 111111 111 1121  13333333    4689999998


Q ss_pred             ccc
Q 029125          129 VGG  131 (198)
Q Consensus       129 ag~  131 (198)
                      .+.
T Consensus        76 ~~~   78 (377)
T 3uw3_A           76 QGG   78 (377)
T ss_dssp             SCH
T ss_pred             CCh
Confidence            873

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.18  E-value=0.00098  Score=54.86  Aligned_cols=73  Identities=15%  Similarity=0.115  Sum_probs=50.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCC----------------------CH
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLL----------------------SS  112 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~----------------------d~  112 (198)
                      .+++|+|+|+ |.+|..+++.+...|.+|++.+|++.+...... -+..++..|..                      +.
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~-~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~  248 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES-LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  248 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH-TTCEECCC-----------------------CCHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence            5789999996 999999999999999999999998654221111 12222211221                      12


Q ss_pred             HHHHHHhcCCCEEEEcc
Q 029125          113 DSWKEALDGVTAVISCV  129 (198)
Q Consensus       113 ~~~~~~~~~~d~vi~~a  129 (198)
                      +.+.+.++++|+||+++
T Consensus       249 ~~l~~~~~~aDvVi~~~  265 (384)
T 1l7d_A          249 EAVLKELVKTDIAITTA  265 (384)
T ss_dssp             HHHHHHHTTCSEEEECC
T ss_pred             HHHHHHhCCCCEEEECC
Confidence            34777888999999988

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.17  E-value=0.00045  Score=56.66  Aligned_cols=110  Identities=13%  Similarity=0.071  Sum_probs=67.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCC--e---EEEeecCCCCc--------cc--ccCCCCeEEEEccCCCHHHHHH
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGL--T---VASLSRSGRSS--------LR--DSWANNVIWHQGNLLSSDSWKE  117 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~--~---V~~l~r~~~~~--------~~--~~~~~~~~~~~~D~~d~~~~~~  117 (198)
                      +..+.+|.|+||+|.+|.+++-.|+..+.  +   +.+.+.+.+..        .+  ....+-..-+  .+.+  .-.+
T Consensus        29 ~~~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v--~i~~--~~y~  104 (375)
T 7mdh_A           29 WKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREV--SIGI--DPYE  104 (375)
T ss_dssp             CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEE--EEES--CHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCc--EEec--CCHH
Confidence            34567999999999999999999998763  2   66654433221        00  0000111111  1111  1256


Q ss_pred             HhcCCCEEEEccccCCC----CccceehhhHHHHHHHHHHHHc-CCC-EEEEeec
Q 029125          118 ALDGVTAVISCVGGFGS----NSYMYKINGTANINAIRAASEK-GVK-RFVYISA  166 (198)
Q Consensus       118 ~~~~~d~vi~~ag~~~~----~~~~~~~n~~~~~~~~~a~~~~-~~~-~~v~~Ss  166 (198)
                      .+++.|+||.++|....    ..+.+..|..-...+.+.+.+. +.. .++.+|.
T Consensus       105 ~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN  159 (375)
T 7mdh_A          105 VFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN  159 (375)
T ss_dssp             HTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            78999999999986442    2445677777777777887764 443 4555553

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.17  E-value=0.0022  Score=51.90  Aligned_cols=94  Identities=15%  Similarity=0.190  Sum_probs=56.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHC-CCeEEEeecCC---CC--cccc---cCCC--CeEEEEccCCCHHHHHHHhcCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSG---RS--SLRD---SWAN--NVIWHQGNLLSSDSWKEALDGVT  123 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~r~~---~~--~~~~---~~~~--~~~~~~~D~~d~~~~~~~~~~~d  123 (198)
                      .|++|.|.||||.+|+.+++.|.++ ..++..+..+.   ..  ....   ....  .+.+...  .+.+   ++.+++|
T Consensus         3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~~---~~~~~~D   77 (337)
T 3dr3_A            3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDIS---EFSPGVD   77 (337)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSGG---GTCTTCS
T ss_pred             CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CCHH---HHhcCCC
Confidence            3679999999999999999999985 46887775443   11  1110   0111  2222222  0222   2237899


Q ss_pred             EEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          124 AVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       124 ~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      +||.+.+..            ....++..+.+.|. ++|-.|+
T Consensus        78 vvf~a~p~~------------~s~~~~~~~~~~g~-~vIDlSa  107 (337)
T 3dr3_A           78 VVFLATAHE------------VSHDLAPQFLEAGC-VVFDLSG  107 (337)
T ss_dssp             EEEECSCHH------------HHHHHHHHHHHTTC-EEEECSS
T ss_pred             EEEECCChH------------HHHHHHHHHHHCCC-EEEEcCC
Confidence            999988641            12345556666776 5666665

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=97.16  E-value=0.00071  Score=53.53  Aligned_cols=36  Identities=28%  Similarity=0.499  Sum_probs=28.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHC-CCeEEEe-ecC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDR-GLTVASL-SRS   89 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l-~r~   89 (198)
                      ..+.+|.|.|++|.+|+.+++.+.+. +.+++.. +|+
T Consensus        19 ~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~   56 (288)
T 3ijp_A           19 PGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRK   56 (288)
T ss_dssp             --CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCT
T ss_pred             cCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence            45679999999999999999998865 5676655 554

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=97.16  E-value=0.0029  Score=51.31  Aligned_cols=70  Identities=14%  Similarity=0.226  Sum_probs=51.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccC-CCHHHHHHHhcCCCEEEEcc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNL-LSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~-~d~~~~~~~~~~~d~vi~~a  129 (198)
                      ||+|+|+|| |..|..++..+.+.|++|++++.++.... ....+  +++..|. .|.+.+....+++|+|+-..
T Consensus         1 MK~I~ilGg-g~~g~~~~~~Ak~~G~~vv~vd~~~~~~~-~~~aD--~~~~~~~~~d~~~~~~~~~~~D~v~~~~   71 (363)
T 4ffl_A            1 MKTICLVGG-KLQGFEAAYLSKKAGMKVVLVDKNPQALI-RNYAD--EFYCFDVIKEPEKLLELSKRVDAVLPVN   71 (363)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTT-TTTSS--EEEECCTTTCHHHHHHHHTSSSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCChh-HhhCC--EEEECCCCcCHHHHHHHhcCCCEEEECC
Confidence            789999996 89999999999999999999987654321 11111  3455565 46777777778999987543

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.15  E-value=0.0034  Score=50.62  Aligned_cols=104  Identities=13%  Similarity=0.016  Sum_probs=70.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCccc--------ccCCCCeEEE-EccCCCHHHHHHHhcCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR--------DSWANNVIWH-QGNLLSSDSWKEALDGVT  123 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~--------~~~~~~~~~~-~~D~~d~~~~~~~~~~~d  123 (198)
                      ..++|.|+|+ |.+|..++..|+..|.  +|+++++++.+...        ........+. ..|+      .+ ++++|
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~------~~-~~daD   91 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDY------SV-SAGSK   91 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSS------CS-CSSCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCH------HH-hCCCC
Confidence            4579999998 9999999999999986  89999986532110        0111122222 2343      22 78999


Q ss_pred             EEEEccccCCC----CccceehhhHHHHHHHHHHHHcCCC-EEEEeec
Q 029125          124 AVISCVGGFGS----NSYMYKINGTANINAIRAASEKGVK-RFVYISA  166 (198)
Q Consensus       124 ~vi~~ag~~~~----~~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~Ss  166 (198)
                      +||-++|....    ..+.+..|..-...+++.+.+.+.. .++.+|.
T Consensus        92 iVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN  139 (330)
T 3ldh_A           92 LVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE  139 (330)
T ss_dssp             EEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence            99999996432    3456677777777888888877655 4555553

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=97.15  E-value=0.0016  Score=56.22  Aligned_cols=68  Identities=15%  Similarity=0.263  Sum_probs=57.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEccc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG  130 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag  130 (198)
                      ++++|.|+ |-+|.++++.|.+.|++|++++.++......     ..++.+|.+|++.+.++ ++++|.+|-+.+
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~-----~~~i~gD~t~~~~L~~agi~~ad~vi~~~~  417 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCND-----HVVVYGDATVGQTLRQAGIDRASGIIVTTN  417 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCCS-----SCEEESCSSSSTHHHHHTTTSCSEEEECCS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhhc-----CCEEEeCCCCHHHHHhcCccccCEEEEECC
Confidence            78999998 9999999999999999999999887653221     18999999999988876 568999998765

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.14  E-value=0.00058  Score=55.84  Aligned_cols=74  Identities=19%  Similarity=0.156  Sum_probs=52.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ..+.+|+|+|+ |.+|...++.+...|++|+++++++.+... ..... -.+  .|..+.+.+.++..++|+||.++|.
T Consensus       193 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa-~~v--i~~~~~~~~~~~~~g~Dvvid~~g~  267 (369)
T 1uuf_A          193 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGA-DEV--VNSRNADEMAAHLKSFDFILNTVAA  267 (369)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC-SEE--EETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC-cEE--eccccHHHHHHhhcCCCEEEECCCC
Confidence            35679999998 889999999888899999999987554211 11111 122  3556665555555689999999985

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=97.14  E-value=0.0043  Score=50.82  Aligned_cols=69  Identities=25%  Similarity=0.399  Sum_probs=40.5

Q ss_pred             CeEEEEcCCchhHHHHHH-HHHHCC---CeEEEeecCCCCcccccCCC-CeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           57 EKLLVLGGNGFVGSHICR-EALDRG---LTVASLSRSGRSSLRDSWAN-NVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~-~l~~~g---~~V~~l~r~~~~~~~~~~~~-~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ++|.|.||||++|+.|++ .|.++.   .++..+.-+........+.. ...+.  |..+.+.    ++++|+||.+.+.
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~~~~~~--~~~~~~~----~~~~Dvvf~a~~~   74 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGMLH--DAFDIES----LKQLDAVITCQGG   74 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCCSSSCCCBCE--ETTCHHH----HTTCSEEEECSCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccCcCHHHhCCCceEEE--ecCChhH----hccCCEEEECCCh
Confidence            479999999999999999 666655   36665543221111111111 11221  3333332    4789999998873

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.14  E-value=0.00029  Score=55.49  Aligned_cols=36  Identities=22%  Similarity=0.422  Sum_probs=33.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      +++|.|+|++|.+|..++..|++.|++|++.+|++.
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~   46 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPE   46 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence            579999999999999999999999999999998754

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.12  E-value=0.00045  Score=55.84  Aligned_cols=75  Identities=24%  Similarity=0.240  Sum_probs=48.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCC-HHHHHHHhc--CCCEEEEccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLS-SDSWKEALD--GVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~--~~d~vi~~ag  130 (198)
                      ..+.+|+|+||+|.+|...++.+...|++|+++ +++.+. +....-+...+. +-.+ .+.+.+...  ++|++|.++|
T Consensus       149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~-~~~~~lGa~~i~-~~~~~~~~~~~~~~~~g~D~vid~~g  225 (343)
T 3gaz_A          149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDL-EYVRDLGATPID-ASREPEDYAAEHTAGQGFDLVYDTLG  225 (343)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHH-HHHHHHTSEEEE-TTSCHHHHHHHHHTTSCEEEEEESSC
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHH-HHHHHcCCCEec-cCCCHHHHHHHHhcCCCceEEEECCC
Confidence            356899999999999999999999999999998 554331 111111233332 2222 233334333  6999999998


Q ss_pred             c
Q 029125          131 G  131 (198)
Q Consensus       131 ~  131 (198)
                      .
T Consensus       226 ~  226 (343)
T 3gaz_A          226 G  226 (343)
T ss_dssp             T
T ss_pred             c
Confidence            3

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.12  E-value=0.002  Score=51.48  Aligned_cols=101  Identities=18%  Similarity=0.170  Sum_probs=66.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCccc------c--cCCCCeEEEEccCCCHHHHHHHhcCCCEEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR------D--SWANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~------~--~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi  126 (198)
                      +||.|+|+ |.+|..++..|+..+  .++.++++++++...      .  .....+.+.. +  +    .++++++|+||
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~----~~a~~~aD~Vi   72 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--S----YGDLEGARAVV   72 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGTTEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--C----HHHhCCCCEEE
Confidence            58999998 999999999999887  589999987532110      0  0112334332 2  2    34588999999


Q ss_pred             EccccCCCC----ccceehhhHHHHHHHHHHHHcCCC-EEEEee
Q 029125          127 SCVGGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYIS  165 (198)
Q Consensus       127 ~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~S  165 (198)
                      ..+|....+    ......|..-...+++.+.+.+.. .++.+|
T Consensus        73 i~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (310)
T 2xxj_A           73 LAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT  116 (310)
T ss_dssp             ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             ECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            999865432    233455666666777777776654 445444

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.11  E-value=0.0022  Score=51.25  Aligned_cols=102  Identities=17%  Similarity=0.159  Sum_probs=62.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccccc-----------CCCCeEEEEccCCCHHHHHHHhcCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDS-----------WANNVIWHQGNLLSSDSWKEALDGV  122 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~~-----------~~~~~~~~~~D~~d~~~~~~~~~~~  122 (198)
                      ++++|.|+|+ |.+|..++..|+..|+ +|+++++++.......           ...++.. ..|      + +.++++
T Consensus         3 ~~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d------~-~a~~~a   73 (317)
T 2ewd_A            3 ERRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG-TDD------Y-ADISGS   73 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESC------G-GGGTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEE-CCC------H-HHhCCC
Confidence            3468999998 9999999999999998 9999999764321100           0112211 112      2 457899


Q ss_pred             CEEEEccccCCCC----ccceehhhHHHHHHHHHHHHcCCCE-EEEee
Q 029125          123 TAVISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKR-FVYIS  165 (198)
Q Consensus       123 d~vi~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~~-~v~~S  165 (198)
                      |+||.++|....+    .+....|......+++.+.+..... ++.+|
T Consensus        74 DiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~s  121 (317)
T 2ewd_A           74 DVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICIT  121 (317)
T ss_dssp             SEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             CEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            9999999854322    1222334444455566665554343 44444

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.11  E-value=0.0012  Score=53.39  Aligned_cols=74  Identities=23%  Similarity=0.234  Sum_probs=50.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCC----HHHHHHHh-----cCCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLS----SDSWKEAL-----DGVT  123 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d----~~~~~~~~-----~~~d  123 (198)
                      ..+.+|+|+|+ |.+|...++.+...|++|+++++++.+... ...... .++  |..+    .+.+.+..     +++|
T Consensus       167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~-~~~--~~~~~~~~~~~i~~~~~~~~g~g~D  242 (352)
T 1e3j_A          167 QLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGAD-VTL--VVDPAKEEESSIIERIRSAIGDLPN  242 (352)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS-EEE--ECCTTTSCHHHHHHHHHHHSSSCCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCC-EEE--cCcccccHHHHHHHHhccccCCCCC
Confidence            35679999997 999999999888899999999887544211 111112 223  3332    34555554     3699


Q ss_pred             EEEEcccc
Q 029125          124 AVISCVGG  131 (198)
Q Consensus       124 ~vi~~ag~  131 (198)
                      +||.++|.
T Consensus       243 ~vid~~g~  250 (352)
T 1e3j_A          243 VTIDCSGN  250 (352)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999974

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.10  E-value=0.00047  Score=57.95  Aligned_cols=38  Identities=24%  Similarity=0.323  Sum_probs=33.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      ..+.+|+|+||+|.+|...++.+...|.+|+++++++.
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~  264 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQ  264 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHH
Confidence            45679999999999999999999999999999987643

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.08  E-value=0.00022  Score=56.54  Aligned_cols=35  Identities=20%  Similarity=0.251  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      +++|.|.|+ |.+|..++..|.+.|++|++++|++.
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~   37 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPA   37 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHH
Confidence            468999997 99999999999999999999998753

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.08  E-value=0.003  Score=50.03  Aligned_cols=98  Identities=17%  Similarity=0.201  Sum_probs=63.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCC-----------------ccc------ccCCC--CeEEEE
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS-----------------SLR------DSWAN--NVIWHQ  106 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~-----------------~~~------~~~~~--~~~~~~  106 (198)
                      .....+|+|.|+ |++|..+++.|+..|. ++.++|.+.-.                 +.+      ....+  .++.+.
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~  111 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN  111 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence            345679999997 9999999999999995 88888875310                 000      00122  355666


Q ss_pred             ccCCCHHHHHHHh-----------cCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEE
Q 029125          107 GNLLSSDSWKEAL-----------DGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVY  163 (198)
Q Consensus       107 ~D~~d~~~~~~~~-----------~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~  163 (198)
                      .++++.+.+.+++           +++|+||.+...           ...-..+-++|.+.+.. +|+
T Consensus       112 ~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn-----------~~~R~~in~~c~~~~~P-li~  167 (292)
T 3h8v_A          112 YNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDN-----------FEARMTINTACNELGQT-WME  167 (292)
T ss_dssp             CCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSS-----------HHHHHHHHHHHHHHTCC-EEE
T ss_pred             ccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcc-----------hhhhhHHHHHHHHhCCC-EEE
Confidence            6777666666654           579999987642           11223455667776653 444

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.08  E-value=0.00028  Score=58.52  Aligned_cols=70  Identities=21%  Similarity=0.294  Sum_probs=51.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCc--ccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--LRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~--~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ..+++|+|+|+ |.+|..+++.|...|. +|++.+|+..+.  .....  +...  .+   .+++.+.+.++|+||.+.+
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~--g~~~--~~---~~~l~~~l~~aDvVi~at~  236 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL--GGEA--VR---FDELVDHLARSDVVVSATA  236 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH--TCEE--CC---GGGHHHHHHTCSEEEECCS
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc--CCce--ec---HHhHHHHhcCCCEEEEccC
Confidence            46789999998 9999999999999998 999999976442  11111  2222  12   2356677789999999986


Q ss_pred             c
Q 029125          131 G  131 (198)
Q Consensus       131 ~  131 (198)
                      .
T Consensus       237 ~  237 (404)
T 1gpj_A          237 A  237 (404)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.08  E-value=0.0009  Score=52.46  Aligned_cols=65  Identities=20%  Similarity=0.173  Sum_probs=46.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      +++++|+|+ |+.|++++..|++.|.+|++.+|+.++..... .-++...  ++.+.       .+.|+||++...
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~~~--~~~~l-------~~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCDCF--MEPPK-------SAFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCEEE--SSCCS-------SCCSEEEECCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEe--cHHHh-------ccCCEEEEcccC
Confidence            789999997 99999999999999999999999876632211 1112322  22221       279999998753

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.07  E-value=0.0044  Score=49.89  Aligned_cols=101  Identities=17%  Similarity=0.166  Sum_probs=63.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccc------c---c--CCCCeEEEEccCCCHHHHHHHhcCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR------D---S--WANNVIWHQGNLLSSDSWKEALDGVT  123 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~------~---~--~~~~~~~~~~D~~d~~~~~~~~~~~d  123 (198)
                      +++|.|+|| |.+|..++..|+..|+ +|++.++++.....      .   .  ...++.. ..|      + ++++++|
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-t~d------~-~al~~aD   84 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG-ENN------Y-EYLQNSD   84 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-ESC------G-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE-CCC------H-HHHCCCC
Confidence            368999998 9999999999999998 99999998643211      0   0  0112221 122      2 4578999


Q ss_pred             EEEEccccCCCC----ccceehhhHHHHHHHHHHHHcCCCE-EEEee
Q 029125          124 AVISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKR-FVYIS  165 (198)
Q Consensus       124 ~vi~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~~-~v~~S  165 (198)
                      +||.++|....+    ......|..-...+++.+.+...+. ++++|
T Consensus        85 ~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  131 (328)
T 2hjr_A           85 VVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICIT  131 (328)
T ss_dssp             EEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999999754322    2223345555556666666655443 34444

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.07  E-value=0.00066  Score=54.36  Aligned_cols=71  Identities=21%  Similarity=0.161  Sum_probs=45.8

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCH--HHHHHHh-cCCCEEEEcccc
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSS--DSWKEAL-DGVTAVISCVGG  131 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~--~~~~~~~-~~~d~vi~~ag~  131 (198)
                      +|+|+||+|.+|...++.+...|++|+++++++.+... ...... .++  |..+.  +.+.++. .++|++|.++|.
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~-~~i--~~~~~~~~~~~~~~~~~~d~vid~~g~  226 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAK-EVL--AREDVMAERIRPLDKQRWAAAVDPVGG  226 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCS-EEE--ECC---------CCSCCEEEEEECSTT
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCc-EEE--ecCCcHHHHHHHhcCCcccEEEECCcH
Confidence            79999999999999999998999999999987554211 111111 222  44433  1122222 258999999984

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.07  E-value=0.00043  Score=56.28  Aligned_cols=74  Identities=20%  Similarity=0.209  Sum_probs=50.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCH-HHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSS-DSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~-~~~~~~~~~~d~vi~~ag~  131 (198)
                      ..+.+|+|+|+ |.+|...++.+...|++|+++++++.+... ..... -.++  |..+. +....+..++|+||.+.|.
T Consensus       178 ~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa-~~v~--~~~~~~~~~~~~~~~~D~vid~~g~  253 (360)
T 1piw_A          178 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGA-DHYI--ATLEEGDWGEKYFDTFDLIVVCASS  253 (360)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC-SEEE--EGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCC-CEEE--cCcCchHHHHHhhcCCCEEEECCCC
Confidence            35679999999 999999998888889999999987655221 11111 1222  44333 3233333589999999985

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=97.05  E-value=0.0022  Score=51.50  Aligned_cols=80  Identities=20%  Similarity=0.116  Sum_probs=55.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCe-EEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNV-IWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~-~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      ...+++++|.|++..+|+.+++.|+..|.+|++++|+......  ....... .......++++++.+.++++|+||.+.
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsAt  253 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGV  253 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEECC
Confidence            4678999999997788999999999999999999887332111  1111111 111111134578899999999999998


Q ss_pred             ccC
Q 029125          130 GGF  132 (198)
Q Consensus       130 g~~  132 (198)
                      |..
T Consensus       254 g~p  256 (320)
T 1edz_A          254 PSE  256 (320)
T ss_dssp             CCT
T ss_pred             CCC
Confidence            853

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.05  E-value=0.00067  Score=52.73  Aligned_cols=68  Identities=13%  Similarity=0.168  Sum_probs=49.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ..+ +++|.|+ |+.|++++..|++.|. +|++.+|+..+...  ....+...  +   .+++.+.+++.|+||++..
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~--la~~~~~~--~---~~~~~~~~~~aDiVInatp  175 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKA--LDFPVKIF--S---LDQLDEVVKKAKSLFNTTS  175 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHT--CCSSCEEE--E---GGGHHHHHHTCSEEEECSS
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH--HHHHcccC--C---HHHHHhhhcCCCEEEECCC
Confidence            356 8999997 9999999999999998 99999998654221  11222222  1   2345667789999999774

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=97.04  E-value=0.0026  Score=50.09  Aligned_cols=57  Identities=16%  Similarity=0.222  Sum_probs=47.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ...+++++|+|+++.+|+.++..|+..|..|+++.++.                      .++.+.++..|+||...|.
T Consensus       157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t----------------------~~L~~~~~~ADIVI~Avg~  213 (285)
T 3p2o_A          157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT----------------------KDLSLYTRQADLIIVAAGC  213 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------SCHHHHHTTCSEEEECSSC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc----------------------hhHHHHhhcCCEEEECCCC
Confidence            45789999999999999999999999999999987642                      1256778889999998874

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.03  E-value=0.00065  Score=54.95  Aligned_cols=73  Identities=18%  Similarity=0.119  Sum_probs=49.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccc-ccCCCCeEEEEccCCCH---HHHHHHhc--CCCEEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR-DSWANNVIWHQGNLLSS---DSWKEALD--GVTAVIS  127 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~---~~~~~~~~--~~d~vi~  127 (198)
                      .+.+|+|+|+ |.+|..+++.+...|+ +|+++++++.+... ..... -.+  .|..+.   +.+.++..  ++|+||.
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga-~~~--~~~~~~~~~~~v~~~~~g~g~D~vid  242 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGA-DYV--INPFEEDVVKEVMDITDGNGVDVFLE  242 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTC-SEE--ECTTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC-CEE--ECCCCcCHHHHHHHHcCCCCCCEEEE
Confidence            6779999999 9999999999999999 99999987543211 11111 122  244432   23334333  6899999


Q ss_pred             cccc
Q 029125          128 CVGG  131 (198)
Q Consensus       128 ~ag~  131 (198)
                      ++|.
T Consensus       243 ~~g~  246 (348)
T 2d8a_A          243 FSGA  246 (348)
T ss_dssp             CSCC
T ss_pred             CCCC
Confidence            9984

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=97.02  E-value=0.00071  Score=53.91  Aligned_cols=37  Identities=14%  Similarity=0.299  Sum_probs=33.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      .|++|.++|- |..|..+++.|++.|++|++.+|++.+
T Consensus         2 ~M~kIgfIGl-G~MG~~mA~~L~~~G~~v~v~dr~~~~   38 (300)
T 3obb_A            2 HMKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSA   38 (300)
T ss_dssp             -CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CcCEEEEeee-hHHHHHHHHHHHhCCCeEEEEcCCHHH
Confidence            4789999995 999999999999999999999998654

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.02  E-value=0.00054  Score=54.65  Aligned_cols=39  Identities=21%  Similarity=0.286  Sum_probs=34.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      ...+++|.|+|. |.+|..++..|++.|++|++.+|++.+
T Consensus        18 ~~~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~   56 (310)
T 3doj_A           18 GSHMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSK   56 (310)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGG
T ss_pred             cccCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            346789999996 999999999999999999999998654

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.01  E-value=0.00069  Score=53.25  Aligned_cols=70  Identities=14%  Similarity=0.181  Sum_probs=48.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccc--ccCC-CCeEEEEccCCCHHHHHHHhcCCCEEEEc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR--DSWA-NNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~--~~~~-~~~~~~~~D~~d~~~~~~~~~~~d~vi~~  128 (198)
                      ...+++++|+|+ |++|+.++..|++.|. +|++.+|+..+...  .... .++..+  ++.+   +..  .+.|+||++
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~--~~~~---l~~--~~~DivIna  188 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRIS--RYEA---LEG--QSFDIVVNA  188 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEE--CSGG---GTT--CCCSEEEEC
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEe--eHHH---hcc--cCCCEEEEC
Confidence            356889999997 8999999999999995 99999998654211  1111 123333  2222   211  679999998


Q ss_pred             cc
Q 029125          129 VG  130 (198)
Q Consensus       129 ag  130 (198)
                      ..
T Consensus       189 Tp  190 (272)
T 3pwz_A          189 TS  190 (272)
T ss_dssp             SS
T ss_pred             CC
Confidence            65

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.00  E-value=0.0031  Score=53.05  Aligned_cols=35  Identities=20%  Similarity=0.273  Sum_probs=31.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      ++|.|+|+ |.+|..++..|++.|++|++++|++.+
T Consensus         3 mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~   37 (450)
T 3gg2_A            3 LDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNK   37 (450)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHH
Confidence            68999996 999999999999999999999998643

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.99  E-value=0.00069  Score=54.80  Aligned_cols=70  Identities=21%  Similarity=0.198  Sum_probs=48.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      ..+.+|+|+|+ |.+|...++.+...|.+|+++++++.+... ...... .++    .+.+.+.+   ++|+||.+.|..
T Consensus       175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~-~v~----~~~~~~~~---~~D~vid~~g~~  245 (348)
T 3two_A          175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVK-HFY----TDPKQCKE---ELDFIISTIPTH  245 (348)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCS-EEE----SSGGGCCS---CEEEEEECCCSC
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCC-eec----CCHHHHhc---CCCEEEECCCcH
Confidence            45779999997 999999999888899999999987655221 111111 222    33443322   899999998853

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.98  E-value=0.0027  Score=50.33  Aligned_cols=57  Identities=19%  Similarity=0.300  Sum_probs=47.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHH--HHhcCCCEEEEccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK--EALDGVTAVISCVG  130 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~--~~~~~~d~vi~~ag  130 (198)
                      ...+++++|.|+++.+|+.++..|+..|+.|+++.|+..                      ++.  +.++.+|+||...|
T Consensus       162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~----------------------~l~l~~~~~~ADIVI~Avg  219 (300)
T 4a26_A          162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS----------------------TEDMIDYLRTADIVIAAMG  219 (300)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC----------------------HHHHHHHHHTCSEEEECSC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC----------------------CchhhhhhccCCEEEECCC
Confidence            457899999999888999999999999999999987421                      233  77889999999888


Q ss_pred             c
Q 029125          131 G  131 (198)
Q Consensus       131 ~  131 (198)
                      .
T Consensus       220 ~  220 (300)
T 4a26_A          220 Q  220 (300)
T ss_dssp             C
T ss_pred             C
Confidence            5

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.97  E-value=0.0022  Score=53.07  Aligned_cols=76  Identities=16%  Similarity=0.120  Sum_probs=53.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEcc----------------CCC------H
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGN----------------LLS------S  112 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D----------------~~d------~  112 (198)
                      .+.+|+|+|+ |-+|...++.+...|++|+++++++.+...... -+..++..+                +++      .
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~  266 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA  266 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH-TTCEECCCCC-----------------CHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCCceeecccccccccccccchhhhcchhhhhhhH
Confidence            4679999998 999999999999999999999998764211111 122333222                222      2


Q ss_pred             HHHHHHhcCCCEEEEccccC
Q 029125          113 DSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus       113 ~~~~~~~~~~d~vi~~ag~~  132 (198)
                      +.+.++++++|+||.++...
T Consensus       267 ~~l~e~l~~aDVVI~tvlip  286 (405)
T 4dio_A          267 ALVAEHIAKQDIVITTALIP  286 (405)
T ss_dssp             HHHHHHHHTCSEEEECCCCS
T ss_pred             hHHHHHhcCCCEEEECCcCC
Confidence            46788889999999987543

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.97  E-value=0.00082  Score=55.20  Aligned_cols=75  Identities=16%  Similarity=0.170  Sum_probs=53.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccC------------------CCHHHHH
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNL------------------LSSDSWK  116 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~------------------~d~~~~~  116 (198)
                      .+.+|+|+|+ |.+|..+++.+...|.+|++++|++.+..... .-+..++..|+                  .+.+.+.
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~-~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR-SVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH-HTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence            5679999998 99999999999999999999999865422111 11334433221                  1235677


Q ss_pred             HHhcCCCEEEEcccc
Q 029125          117 EALDGVTAVISCVGG  131 (198)
Q Consensus       117 ~~~~~~d~vi~~ag~  131 (198)
                      +.+++.|+||.++..
T Consensus       261 e~l~~aDIVI~tv~i  275 (381)
T 3p2y_A          261 DAITKFDIVITTALV  275 (381)
T ss_dssp             HHHTTCSEEEECCCC
T ss_pred             HHHhcCCEEEECCCC
Confidence            888999999998743

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=96.96  E-value=0.0035  Score=49.92  Aligned_cols=102  Identities=19%  Similarity=0.176  Sum_probs=63.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCcccc--c-------CCCCeEEEEccCCCHHHHHHHhcCCCE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRD--S-------WANNVIWHQGNLLSSDSWKEALDGVTA  124 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~~--~-------~~~~~~~~~~D~~d~~~~~~~~~~~d~  124 (198)
                      |++|.|+| +|.+|..++..|+..|  ++|++++|++......  .       ....+.+...|   .    +.++++|+
T Consensus         1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d---~----~~~~~aDv   72 (309)
T 1hyh_A            1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---W----AALADADV   72 (309)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---G----GGGTTCSE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCC---H----HHhCCCCE
Confidence            46899999 5999999999999999  7999999975331110  0       01123332222   2    35679999


Q ss_pred             EEEccccCCC----C----ccceehhhHHHHHHHHHHHHcCCC-EEEEee
Q 029125          125 VISCVGGFGS----N----SYMYKINGTANINAIRAASEKGVK-RFVYIS  165 (198)
Q Consensus       125 vi~~ag~~~~----~----~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~S  165 (198)
                      ||.+++....    +    ......|..-...+++.+.+...+ .++.++
T Consensus        73 Viiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t  122 (309)
T 1hyh_A           73 VISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (309)
T ss_dssp             EEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            9999875332    1    123344555555666666665444 344444

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.95  E-value=0.0011  Score=52.39  Aligned_cols=71  Identities=20%  Similarity=0.145  Sum_probs=51.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ...+++|+|.|+ |.+|+.+++.|...|.+|++.+|+..+..... ..++..+     +.+++.+++++.|+|+.+..
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~-----~~~~l~~~l~~aDvVi~~~p  222 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIA-EMGMEPF-----HISKAAQELRDVDVCINTIP  222 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTSEEE-----EGGGHHHHTTTCSEEEECCS
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HCCCeec-----ChhhHHHHhcCCCEEEECCC
Confidence            356789999996 99999999999999999999998754321110 1133332     12456778889999999874

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.94  E-value=0.0048  Score=49.42  Aligned_cols=67  Identities=16%  Similarity=0.237  Sum_probs=51.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ...+++|.|.|. |.||+.+++.|...|++|++.+|++...      .++....    ..+++.+++++.|+|+.+.-
T Consensus       136 ~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~------~~~~~~~----~~~~l~ell~~aDiV~l~~P  202 (315)
T 3pp8_A          136 TREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKSW------PGVESYV----GREELRAFLNQTRVLINLLP  202 (315)
T ss_dssp             CSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCCC------TTCEEEE----SHHHHHHHHHTCSEEEECCC
T ss_pred             CcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchhh------hhhhhhc----ccCCHHHHHhhCCEEEEecC
Confidence            356789999996 9999999999999999999999876532      1222221    13678889999999988764

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.94  E-value=0.0015  Score=49.70  Aligned_cols=72  Identities=13%  Similarity=0.206  Sum_probs=53.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccccc-CCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS-WANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ..++++|+|.|| |-+|...++.|++.|++|++++.+..+..... ...+++++..++.+.     .++++|.||-+.+
T Consensus        28 ~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~-----dL~~adLVIaAT~  100 (223)
T 3dfz_A           28 DLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEE-----DLLNVFFIVVATN  100 (223)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGG-----GSSSCSEEEECCC
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHh-----HhCCCCEEEECCC
Confidence            467899999998 99999999999999999999987654322211 124577777666532     2568999986554

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.93  E-value=0.0012  Score=52.34  Aligned_cols=72  Identities=22%  Similarity=0.243  Sum_probs=52.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ...+++|+|.|+ |.+|+.+++.|...|.+|++.+|+..+..... ..++..+.     .+++.+++++.|+||.+...
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~~-----~~~l~~~l~~aDvVi~~~p~  225 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARIT-EMGLVPFH-----TDELKEHVKDIDICINTIPS  225 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCEEEE-----GGGHHHHSTTCSEEEECCSS
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCCeEEc-----hhhHHHHhhCCCEEEECCCh
Confidence            456789999996 99999999999999999999999754321100 11333321     23567788899999998764

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.93  E-value=0.0013  Score=54.57  Aligned_cols=75  Identities=15%  Similarity=0.172  Sum_probs=51.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCC-------------CH-------HH
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLL-------------SS-------DS  114 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~-------------d~-------~~  114 (198)
                      .+++|+|+|+ |.+|..+++.+...|.+|+++++++.+...... -+..++..|..             +.       +.
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~-lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  248 (401)
T 1x13_A          171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL  248 (401)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHH-TTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence            4689999997 999999999999999999999998654221111 13343322221             11       14


Q ss_pred             HHHHhcCCCEEEEcccc
Q 029125          115 WKEALDGVTAVISCVGG  131 (198)
Q Consensus       115 ~~~~~~~~d~vi~~ag~  131 (198)
                      +.+.++++|+||.+++.
T Consensus       249 l~e~~~~aDvVI~~~~~  265 (401)
T 1x13_A          249 FAAQAKEVDIIVTTALI  265 (401)
T ss_dssp             HHHHHHHCSEEEECCCC
T ss_pred             HHHHhCCCCEEEECCcc
Confidence            66777789999998643

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.92  E-value=0.00037  Score=54.76  Aligned_cols=70  Identities=19%  Similarity=0.205  Sum_probs=48.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ..+++|+|.|+ |.+|+.++..|.+.|++|++.+|+.++.......-++.+  .+     ++.++++++|+||++...
T Consensus       127 ~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~--~~-----~~~~~~~~aDiVi~atp~  196 (275)
T 2hk9_A          127 VKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEV--VN-----SPEEVIDKVQVIVNTTSV  196 (275)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEE--CS-----CGGGTGGGCSEEEECSST
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCee--eh-----hHHhhhcCCCEEEEeCCC
Confidence            35689999996 899999999999999999999987543211111112222  11     234456789999998864

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.92  E-value=0.0022  Score=52.34  Aligned_cols=74  Identities=12%  Similarity=0.131  Sum_probs=48.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC-cccccCCCCeEEEEccCCCH---HHHHHHhc-CCCEEEEc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS-SLRDSWANNVIWHQGNLLSS---DSWKEALD-GVTAVISC  128 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~-~~~~~~~~~~~~~~~D~~d~---~~~~~~~~-~~d~vi~~  128 (198)
                      ..+.+|+|+||+|.+|...++.+...|++|+++. ++.+ ....... .-.++  |..+.   +.+.++.. ++|++|.+
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lG-a~~vi--~~~~~~~~~~v~~~t~g~~d~v~d~  238 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRG-AEEVF--DYRAPNLAQTIRTYTKNNLRYALDC  238 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTT-CSEEE--ETTSTTHHHHHHHHTTTCCCEEEES
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcC-CcEEE--ECCCchHHHHHHHHccCCccEEEEC
Confidence            4567999999999999999999999999998886 3332 1111111 11233  44333   33444332 59999999


Q ss_pred             ccc
Q 029125          129 VGG  131 (198)
Q Consensus       129 ag~  131 (198)
                      .|.
T Consensus       239 ~g~  241 (371)
T 3gqv_A          239 ITN  241 (371)
T ss_dssp             SCS
T ss_pred             CCc
Confidence            984

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=96.90  E-value=0.008  Score=49.08  Aligned_cols=71  Identities=18%  Similarity=0.319  Sum_probs=53.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEcc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCV  129 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~a  129 (198)
                      .+++|+|+|+ |.+|..+++.+.+.|++|++++..+..... ...  -.++..|..|.+.+.++.+  ++|+|+...
T Consensus        10 ~~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~-~~~--d~~~~~~~~d~~~l~~~~~~~~~d~v~~~~   82 (391)
T 1kjq_A           10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM-HVA--HRSHVINMLDGDALRRVVELEKPHYIVPEI   82 (391)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG-GGS--SEEEECCTTCHHHHHHHHHHHCCSEEEECS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCchh-hhc--cceEECCCCCHHHHHHHHHHcCCCEEEECC
Confidence            4679999987 789999999999999999999876543211 111  1456678889988888775  799998743

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.90  E-value=0.0023  Score=51.58  Aligned_cols=72  Identities=14%  Similarity=0.169  Sum_probs=48.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccc-ccCCCCeEEEEccCCCH---HHHHHHh-cCCCEEEEc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR-DSWANNVIWHQGNLLSS---DSWKEAL-DGVTAVISC  128 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~---~~~~~~~-~~~d~vi~~  128 (198)
                      .+.+|+|+|+ |.+|..+++.+...|+ +|+++++++.+... ...  .-.+  .|..+.   +.+.++. +++|+||.+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l--a~~v--~~~~~~~~~~~~~~~~~~g~D~vid~  238 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY--ADRL--VNPLEEDLLEVVRRVTGSGVEVLLEF  238 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT--CSEE--ECTTTSCHHHHHHHHHSSCEEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh--HHhc--cCcCccCHHHHHHHhcCCCCCEEEEC
Confidence            6789999999 9999999999888998 99999987543211 111  1122  344432   2233222 368999999


Q ss_pred             ccc
Q 029125          129 VGG  131 (198)
Q Consensus       129 ag~  131 (198)
                      +|.
T Consensus       239 ~g~  241 (343)
T 2dq4_A          239 SGN  241 (343)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            874

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.89  E-value=0.0022  Score=48.15  Aligned_cols=37  Identities=16%  Similarity=0.212  Sum_probs=31.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      ..+++|.|.| .|.+|..++..|.+.|++|++.+|++.
T Consensus        17 ~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~   53 (209)
T 2raf_A           17 FQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ   53 (209)
T ss_dssp             ---CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            4567999999 599999999999999999999998754

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.88  E-value=0.017  Score=44.57  Aligned_cols=98  Identities=15%  Similarity=0.215  Sum_probs=61.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCC------Ccc---------c---------ccCCCC--eEEEEc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGR------SSL---------R---------DSWANN--VIWHQG  107 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~------~~~---------~---------~~~~~~--~~~~~~  107 (198)
                      ...+|+|.|+ |++|.++++.|+..|. ++++++++.-      ++.         .         ....+.  ++.+..
T Consensus        27 ~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~  105 (251)
T 1zud_1           27 LDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQ  105 (251)
T ss_dssp             HTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             hcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEec
Confidence            4679999998 8899999999999996 7888876531      100         0         000123  344444


Q ss_pred             cCCCHHHHHHHhcCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          108 NLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       108 D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      ++. .+.+.+++++.|+||.+....           ..-..+-++|.+.+.. +|+.+.
T Consensus       106 ~~~-~~~~~~~~~~~DvVi~~~d~~-----------~~r~~l~~~~~~~~~p-~i~~~~  151 (251)
T 1zud_1          106 RLT-GEALKDAVARADVVLDCTDNM-----------ATRQEINAACVALNTP-LITASA  151 (251)
T ss_dssp             CCC-HHHHHHHHHHCSEEEECCSSH-----------HHHHHHHHHHHHTTCC-EEEEEE
T ss_pred             cCC-HHHHHHHHhcCCEEEECCCCH-----------HHHHHHHHHHHHhCCC-EEEEec
Confidence            443 566778888999999876421           1223455666666653 555443

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.87  E-value=0.0045  Score=48.73  Aligned_cols=57  Identities=21%  Similarity=0.266  Sum_probs=47.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ...+++++|.|+++.+|+.++..|+..|..|+++.++.                      .++.+.++..|+||...|.
T Consensus       158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t----------------------~~L~~~~~~ADIVI~Avg~  214 (285)
T 3l07_A          158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT----------------------TDLKSHTTKADILIVAVGK  214 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------SSHHHHHTTCSEEEECCCC
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc----------------------hhHHHhcccCCEEEECCCC
Confidence            45789999999988899999999999999999887541                      1356778899999998874

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=96.86  E-value=0.00077  Score=54.47  Aligned_cols=75  Identities=15%  Similarity=0.062  Sum_probs=47.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEE------ccCC-CHHHHHHHhcCCCEEEEc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQ------GNLL-SSDSWKEALDGVTAVISC  128 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~------~D~~-d~~~~~~~~~~~d~vi~~  128 (198)
                      +++|.|.|+ |.+|..++..|.+.|++|++++|++..........++.+..      ..+. ..+++.++++++|+||.+
T Consensus         4 ~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~   82 (359)
T 1bg6_A            4 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV   82 (359)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEe
Confidence            468999997 99999999999999999999998754311100000111110      0010 112344566789999988


Q ss_pred             ccc
Q 029125          129 VGG  131 (198)
Q Consensus       129 ag~  131 (198)
                      ...
T Consensus        83 v~~   85 (359)
T 1bg6_A           83 VPA   85 (359)
T ss_dssp             SCG
T ss_pred             CCc
Confidence            753

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=96.86  E-value=0.00074  Score=51.14  Aligned_cols=37  Identities=19%  Similarity=0.260  Sum_probs=32.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEE-eecCCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVAS-LSRSGRS   92 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~-l~r~~~~   92 (198)
                      +|++|.|+| +|.+|..++..|.+.|++|++ .+|++++
T Consensus        22 ~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~   59 (220)
T 4huj_A           22 SMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPAS   59 (220)
T ss_dssp             GSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGG
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHH
Confidence            467999999 599999999999999999998 8887544

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=96.85  E-value=0.003  Score=51.27  Aligned_cols=77  Identities=16%  Similarity=0.151  Sum_probs=50.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCe-EEEeecCCCCccc-ccCCCCeEEEEccCCCHHHHHHH----h--cCCCEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLT-VASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEA----L--DGVTAV  125 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~-V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~----~--~~~d~v  125 (198)
                      ..+.+|+|+|+ |.+|...++.+...|.+ |+++++++.+... ......+.....|-.+.+++.+.    .  +++|+|
T Consensus       178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvv  256 (363)
T 3m6i_A          178 RLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVA  256 (363)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEE
Confidence            35679999998 99999999988889987 8888876544211 11122333334444444444433    2  269999


Q ss_pred             EEcccc
Q 029125          126 ISCVGG  131 (198)
Q Consensus       126 i~~ag~  131 (198)
                      |.+.|.
T Consensus       257 id~~g~  262 (363)
T 3m6i_A          257 LECTGV  262 (363)
T ss_dssp             EECSCC
T ss_pred             EECCCC
Confidence            999884

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.84  E-value=0.00079  Score=52.97  Aligned_cols=35  Identities=26%  Similarity=0.446  Sum_probs=32.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      ++|.|.|. |.+|..++..|++.|++|++.+|++.+
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~   36 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEK   36 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGG
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            68999996 999999999999999999999998654

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=96.84  E-value=0.0046  Score=43.69  Aligned_cols=33  Identities=15%  Similarity=0.267  Sum_probs=28.6

Q ss_pred             CCeEEEEcCC---chhHHHHHHHHHHCCCeEEEeec
Q 029125           56 SEKLLVLGGN---GFVGSHICREALDRGLTVASLSR   88 (198)
Q Consensus        56 ~~~vlvtGat---G~iG~~l~~~l~~~g~~V~~l~r   88 (198)
                      .++|+|.|++   |.+|..+++.|.+.|++|+.++.
T Consensus        22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp   57 (144)
T 2d59_A           22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNP   57 (144)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECT
T ss_pred             CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECC
Confidence            5789999998   89999999999999998766643

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.83  E-value=0.00082  Score=53.88  Aligned_cols=38  Identities=24%  Similarity=0.426  Sum_probs=33.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      ..+++|.|+|. |.+|..++..|++.|++|++.+|++.+
T Consensus        29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~   66 (320)
T 4dll_A           29 PYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPAR   66 (320)
T ss_dssp             CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             cCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHH
Confidence            35679999986 999999999999999999999998654

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=96.83  E-value=0.006  Score=48.54  Aligned_cols=103  Identities=17%  Similarity=0.141  Sum_probs=61.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCcc----c--c--cCCCCeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSL----R--D--SWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~----~--~--~~~~~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      +++|.|+|+ |.+|..++..|+..|+  +|++++|++....    .  .  .......+...  .+.    +.++++|+|
T Consensus         7 ~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~----~~~~~aD~V   79 (319)
T 1lld_A            7 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDP----EICRDADMV   79 (319)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG----GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCH----HHhCCCCEE
Confidence            479999998 9999999999999998  9999998753211    0  0  00112222221  122    246789999


Q ss_pred             EEccccCCCC----ccceehhhHHHHHHHHHHHHcCCC-EEEEee
Q 029125          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYIS  165 (198)
Q Consensus       126 i~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~S  165 (198)
                      |.+++....+    ......|......+++...+.+.+ .++.++
T Consensus        80 ii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~  124 (319)
T 1lld_A           80 VITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  124 (319)
T ss_dssp             EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEec
Confidence            9999754322    122334444444556655554433 344433

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.83  E-value=0.0019  Score=51.02  Aligned_cols=68  Identities=15%  Similarity=0.122  Sum_probs=48.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ...+++++|+|+ |+.|++++..|.+.|. +|++++|+..+....  ...+..+.     .+++.+ + +.|+||++..
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~L--a~~~~~~~-----~~~l~~-l-~~DivInaTp  187 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEI--YGEFKVIS-----YDELSN-L-KGDVIINCTP  187 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHH--CTTSEEEE-----HHHHTT-C-CCSEEEECSS
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH--HHhcCccc-----HHHHHh-c-cCCEEEECCc
Confidence            346789999997 8999999999999997 999999986542211  12222221     233444 4 7999999874

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.81  E-value=0.00097  Score=51.36  Aligned_cols=39  Identities=28%  Similarity=0.325  Sum_probs=32.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      ...+++|.|+| .|.+|..++..|++.|++|++.+|++.+
T Consensus        16 ~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           16 YFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             ccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            44678999998 5999999999999999999999998654

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=96.81  E-value=0.0094  Score=48.31  Aligned_cols=69  Identities=12%  Similarity=0.155  Sum_probs=40.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCC---eEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      .+|.|.||||++|..|++.|.++.+   ++..+.-+...-....+. +.....-|+. .    +.++++|+||.+.+.
T Consensus         2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~~-~~~~~~~~~~-~----~~~~~~Dvvf~a~~~   73 (344)
T 3tz6_A            2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFR-GQEIEVEDAE-T----ADPSGLDIALFSAGS   73 (344)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEET-TEEEEEEETT-T----SCCTTCSEEEECSCH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceeec-CCceEEEeCC-H----HHhccCCEEEECCCh
Confidence            5899999999999999999988743   455554322210000011 1122112222 1    224688999988763

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.81  E-value=0.0015  Score=52.42  Aligned_cols=101  Identities=17%  Similarity=0.153  Sum_probs=62.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCcccc--c------CCCCeEEEEccCCCHHHHHHHhcCCCEEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRD--S------WANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~~--~------~~~~~~~~~~D~~d~~~~~~~~~~~d~vi  126 (198)
                      ++|.|+|+ |.+|..++..|+..|+  +|+++++++......  .      ......+..   +|.    +.++++|+||
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~----~~~~~aDvVi   72 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDY----ADLKGSDVVI   72 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCH----HHhCCCCEEE
Confidence            47999998 9999999999999998  999999875321110  0      001122222   232    3468999999


Q ss_pred             EccccCCCC----ccceehhhHHHHHHHHHHHHcCCC-EEEEee
Q 029125          127 SCVGGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYIS  165 (198)
Q Consensus       127 ~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~S  165 (198)
                      .+++....+    ......|..-...+++.+.+.... .++.+|
T Consensus        73 iav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t  116 (319)
T 1a5z_A           73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (319)
T ss_dssp             ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            999864422    122334444455666666655444 344444

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=96.81  E-value=0.00048  Score=55.09  Aligned_cols=102  Identities=12%  Similarity=0.054  Sum_probs=63.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHC--CCeEEEeecCCCCcccc---cC------CCCeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDR--GLTVASLSRSGRSSLRD---SW------ANNVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~--g~~V~~l~r~~~~~~~~---~~------~~~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      ++|.|+|+ |.+|..++..|+..  |++|+++++++......   ..      .....+...  +|.   .+ ++++|+|
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~---~~-l~~aDvV   73 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY---AD-TANSDIV   73 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG---GG-GTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCH---HH-HCCCCEE
Confidence            47999998 99999999999985  78999999986531110   00      011111110  222   23 7899999


Q ss_pred             EEccccCCCC----ccceehhhHHHHHHHHHHHHcCCC-EEEEee
Q 029125          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYIS  165 (198)
Q Consensus       126 i~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~S  165 (198)
                      |.+++.....    ...+..|..-...+++.+.+.... .++.++
T Consensus        74 iiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t  118 (310)
T 1guz_A           74 IITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (310)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence            9999853321    223345556666777777666544 455554

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=96.80  E-value=0.0023  Score=51.65  Aligned_cols=89  Identities=18%  Similarity=0.147  Sum_probs=50.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeE---EEee-cCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTV---ASLS-RSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V---~~l~-r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      ++|.|.||+|.+|+.+++.|.++++++   ..+. ++............+.+...|   ++   . + ++|+||.+.|..
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~~~g~~i~v~~~~---~~---~-~-~~DvV~~a~g~~   72 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLAFRGEEIPVEPLP---EG---P-L-PVDLVLASAGGG   72 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEEETTEEEEEEECC---SS---C-C-CCSEEEECSHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEEEcCceEEEEeCC---hh---h-c-CCCEEEECCCcc
Confidence            479999999999999999999777643   3222 111110000001122333222   22   2 3 899999998842


Q ss_pred             CCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          133 GSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       133 ~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                                  .+...+....+.|. ++|-.|+
T Consensus        73 ------------~s~~~a~~~~~~G~-~vId~s~   93 (331)
T 2yv3_A           73 ------------ISRAKALVWAEGGA-LVVDNSS   93 (331)
T ss_dssp             ------------HHHHHHHHHHHTTC-EEEECSS
T ss_pred             ------------chHHHHHHHHHCCC-EEEECCC
Confidence                        12334555556666 5666665

>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}

Probab=96.80  E-value=0.0061  Score=48.92  Aligned_cols=74  Identities=9%  Similarity=-0.044  Sum_probs=51.9

Q ss_pred             CCCeEEEEcCCchhHHH-HHHHHHHCCCeEEEeecCCCCcc-cccCCCCeEEEEccCCCHHHHHHHh-cCCCEEEEcccc
Q 029125           55 PSEKLLVLGGNGFVGSH-ICREALDRGLTVASLSRSGRSSL-RDSWANNVIWHQGNLLSSDSWKEAL-DGVTAVISCVGG  131 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~-l~~~l~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~-~~~d~vi~~ag~  131 (198)
                      .+++|.+.|. |+.|.. +++.|+++|++|.+.|++..... ......++.+..+.  +++.   +. .++|.||...|.
T Consensus         3 ~~~~i~~iGi-Gg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~--~~~~---l~~~~~d~vV~Spgi   76 (326)
T 3eag_A            3 AMKHIHIIGI-GGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGF--DAAQ---LDEFKADVYVIGNVA   76 (326)
T ss_dssp             CCCEEEEESC-CSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESC--CGGG---GGSCCCSEEEECTTC
T ss_pred             CCcEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCC--CHHH---cCCCCCCEEEECCCc
Confidence            4689999997 889995 88999999999999998754321 11122467776552  3332   23 479999998886


Q ss_pred             CCC
Q 029125          132 FGS  134 (198)
Q Consensus       132 ~~~  134 (198)
                      ..+
T Consensus        77 ~~~   79 (326)
T 3eag_A           77 KRG   79 (326)
T ss_dssp             CTT
T ss_pred             CCC
Confidence            543

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.80  E-value=0.0019  Score=52.48  Aligned_cols=76  Identities=17%  Similarity=0.074  Sum_probs=49.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCC-HHHHHHHhc--CCCEEEEcc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLS-SDSWKEALD--GVTAVISCV  129 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d-~~~~~~~~~--~~d~vi~~a  129 (198)
                      ..+.+|+|+| +|.+|...++.+...|++|+++++++.+... ..... -.++.-+-.+ .+.+.++..  ++|+||.++
T Consensus       188 ~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa-~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~  265 (363)
T 3uog_A          188 RAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGA-DHGINRLEEDWVERVYALTGDRGADHILEIA  265 (363)
T ss_dssp             CTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC-SEEEETTTSCHHHHHHHHHTTCCEEEEEEET
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCC-CEEEcCCcccHHHHHHHHhCCCCceEEEECC
Confidence            3567999999 7999999999998899999999987543211 11111 1233211112 233444443  699999999


Q ss_pred             cc
Q 029125          130 GG  131 (198)
Q Consensus       130 g~  131 (198)
                      |.
T Consensus       266 g~  267 (363)
T 3uog_A          266 GG  267 (363)
T ss_dssp             TS
T ss_pred             Ch
Confidence            83

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.78  E-value=0.0052  Score=48.38  Aligned_cols=57  Identities=23%  Similarity=0.274  Sum_probs=47.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ...+++++|.|+++.+|+.++..|+..|+.|+++.++..                      ++.+.++..|+||...|.
T Consensus       158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~----------------------~L~~~~~~ADIVI~Avg~  214 (286)
T 4a5o_A          158 DLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTR----------------------DLADHVSRADLVVVAAGK  214 (286)
T ss_dssp             CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCS----------------------CHHHHHHTCSEEEECCCC
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCc----------------------CHHHHhccCCEEEECCCC
Confidence            457899999999999999999999999999998865321                      255667889999998874

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.75  E-value=0.0024  Score=52.30  Aligned_cols=74  Identities=14%  Similarity=0.113  Sum_probs=48.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCccc-ccCCCCeEEEEccCC---CHH---HHHHHhc--CCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLR-DSWANNVIWHQGNLL---SSD---SWKEALD--GVT  123 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~---d~~---~~~~~~~--~~d  123 (198)
                      ..+.+|+|+| +|.+|...++.+...| .+|+++++++.+... ..... -.++  |..   +.+   .+.++..  ++|
T Consensus       194 ~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa-~~vi--~~~~~~~~~~~~~v~~~~~g~g~D  269 (380)
T 1vj0_A          194 FAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA-DLTL--NRRETSVEERRKAIMDITHGRGAD  269 (380)
T ss_dssp             CBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTC-SEEE--ETTTSCHHHHHHHHHHHTTTSCEE
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCC-cEEE--eccccCcchHHHHHHHHhCCCCCc
Confidence            3567999999 7999999999888899 699999987544211 11111 1233  333   222   2333333  689


Q ss_pred             EEEEcccc
Q 029125          124 AVISCVGG  131 (198)
Q Consensus       124 ~vi~~ag~  131 (198)
                      +||.++|.
T Consensus       270 vvid~~g~  277 (380)
T 1vj0_A          270 FILEATGD  277 (380)
T ss_dssp             EEEECSSC
T ss_pred             EEEECCCC
Confidence            99999984

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=96.74  E-value=0.0096  Score=49.72  Aligned_cols=35  Identities=23%  Similarity=0.361  Sum_probs=31.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      |+|.|+| +|.+|..++..|++.|++|++++|++.+
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~   35 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTK   35 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            4799999 4999999999999999999999987543

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.73  E-value=0.0016  Score=52.88  Aligned_cols=74  Identities=16%  Similarity=0.095  Sum_probs=50.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHC-CCeEEEeecCCCCccc-ccCCCCeEEEEccCCCH--HHHHHHhc--CCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSS--DSWKEALD--GVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~--~~~~~~~~--~~d~vi~  127 (198)
                      ..+.+|+|+|+ |.+|...++.+... |.+|+++++++.+... ..... -.++  |..+.  +.+.++..  ++|++|.
T Consensus       185 ~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa-~~vi--~~~~~~~~~v~~~~~g~g~Dvvid  260 (359)
T 1h2b_A          185 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGA-DHVV--DARRDPVKQVMELTRGRGVNVAMD  260 (359)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTC-SEEE--ETTSCHHHHHHHHTTTCCEEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCC-CEEE--eccchHHHHHHHHhCCCCCcEEEE
Confidence            35679999999 99999999888888 9999999987543211 11111 1222  44443  34444443  6899999


Q ss_pred             cccc
Q 029125          128 CVGG  131 (198)
Q Consensus       128 ~ag~  131 (198)
                      +.|.
T Consensus       261 ~~G~  264 (359)
T 1h2b_A          261 FVGS  264 (359)
T ss_dssp             SSCC
T ss_pred             CCCC
Confidence            9874

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.72  E-value=0.0044  Score=48.56  Aligned_cols=56  Identities=16%  Similarity=0.192  Sum_probs=46.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ..+++++|.|+++.+|+.++..|+..|++|+++.++.                      .++.+.++..|+||...|.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t----------------------~~L~~~~~~ADIVI~Avg~  203 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT----------------------KDIGSMTRSSKIVVVAVGR  203 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------SCHHHHHHHSSEEEECSSC
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc----------------------ccHHHhhccCCEEEECCCC
Confidence            6789999999988999999999999999999987642                      2245667788999988874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	198
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	3e-16
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	1e-13
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	5e-13
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	5e-12
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	3e-11
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	7e-11
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-10
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	2e-10
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-10
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	8e-10
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	4e-09
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	2e-08
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-08
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	2e-08
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	5e-08
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	5e-08
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	2e-07
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	2e-07
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	3e-07
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	3e-07
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-07
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	2e-06
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	3e-06
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	4e-06
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	7e-06
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	9e-06
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	1e-05
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	1e-05
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	2e-05
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	7e-04

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (173), Expect = 3e-16
 Identities = 25/112 (22%), Positives = 40/112 (35%), Gaps = 2/112 (1%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+ + G  G  G     +A+  G  V  L R   S L            G++L +    +
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS-SRLPSEGPRPAHVVVGDVLQAADVDK 63

Query: 118 ALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADF 169
            + G  AVI  +G     S    +      N + A    GV + V  ++A  
Sbjct: 64  TVAGQDAVIVLLGTRNDLSPTT-VMSEGARNIVAAMKAHGVDKVVACTSAFL 114

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 65.7 bits (159), Expect = 1e-13
 Identities = 33/145 (22%), Positives = 52/145 (35%), Gaps = 17/145 (11%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           ++ + G  G VGS I R+   RG     L      +L DS A +  +            E
Sbjct: 4   RVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFA----------SE 53

Query: 118 ALDGVTAVISCVGGFGSNSYM----YKINGTANINAIRAASEKGVKRFVYIS-AADFGVA 172
            +D V    + VGG  +N+         N     N I AA +  V + +++  +  +   
Sbjct: 54  RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKL 113

Query: 173 NYLLQGYYEGKRAAETELLTRYPYG 197
               Q   E +    T   T  PY 
Sbjct: 114 AK--QPMAESELLQGTLEPTNEPYA 136

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (155), Expect = 5e-13
 Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 8/114 (7%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           ++L+ GG GFVGSH+  + +  G  V  +        + +  + +      L++ D  + 
Sbjct: 3   RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGR-KRNVEHWIGHENFELINHDVVEP 61

Query: 118 ALDGVTAVI-----SCVGGFGSN-SYMYKINGTANINAIRAASEKGVKRFVYIS 165
               V  +      +    +  N     K N    +N +  A   G  R +  S
Sbjct: 62  LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 114

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 61.4 bits (148), Expect = 5e-12
 Identities = 32/164 (19%), Positives = 54/164 (32%), Gaps = 32/164 (19%)

Query: 56  SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWAN----------NVIWH 105
           S+  L+ G  G  GS++    L++G  V  + R   S   +   +              H
Sbjct: 1   SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLH 60

Query: 106 QGNLLSSDSWKEALDG--------VTAVISCVGGFGSNSYMYKIN--GTANI-NAIRAAS 154
            G+L  + +    L          + A+      F S  Y   ++  GT  +  AIR   
Sbjct: 61  YGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG 120

Query: 155 EKGVKRFVYIS-AADFGVANYLLQG----------YYEGKRAAE 187
            +   RF   S +  +G+   + Q           Y   K  A 
Sbjct: 121 LEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAY 164

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 58.9 bits (141), Expect = 3e-11
 Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 7/110 (6%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWAN--NVIWHQGNLLSSDSW 115
            + V+G  G  G+ + R A   G  V +   S +  + +      NV   QG LL++   
Sbjct: 5   TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPL 64

Query: 116 KEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYIS 165
            + L     +        +   +         +   AA   G  +    S
Sbjct: 65  MDTLFEGAHLAFINTTSQAGDEIA-----IGKDLADAAKRAGTIQHYIYS 109

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 57.9 bits (138), Expect = 7e-11
 Identities = 22/116 (18%), Positives = 39/116 (33%), Gaps = 12/116 (10%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS-------LRDSWANNVIWHQGNLL 110
           ++L++GG G++G  I   ++  G     L R    S       L           + +L 
Sbjct: 5   RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLD 64

Query: 111 SSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166
                 +AL  V  VIS +        +   +    +  + A  E G  +    S 
Sbjct: 65  DHQRLVDALKQVDVVISAL-----AGGVLSHHILEQLKLVEAIKEAGNIKRFLPSE 115

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 57.3 bits (137), Expect = 1e-10
 Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 14/122 (11%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTV---ASLSRSGRSSL---RDSWANNVIWHQGNLLS 111
           ++LV GG+G++GSH C + L  G  V    +L  S RS L         +  + +G++ +
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN 61

Query: 112 SDSWKEAL-----DGV--TAVISCVGGFGSN-SYMYKINGTANINAIRAASEKGVKRFVY 163
                E L     D V   A +  VG         Y  N    +  I A     VK F++
Sbjct: 62  EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIF 121

Query: 164 IS 165
            S
Sbjct: 122 SS 123

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 56.9 bits (136), Expect = 2e-10
 Identities = 31/148 (20%), Positives = 53/148 (35%), Gaps = 9/148 (6%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
           K+ + G  GF+ SHI R     G  V +     ++           +H  +L   ++  +
Sbjct: 17  KISITGAGGFIASHIARRLKHEGHYVIASDWK-KNEHMTEDMFCDEFHLVDLRVMENCLK 75

Query: 118 ALDGVTAVISC-------VGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYI-SAADF 169
             +GV  V +             ++S +   N   + N I AA   G+KRF Y  SA  +
Sbjct: 76  VTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIY 135

Query: 170 GVANYLLQGYYEGKRAAETELLTRYPYG 197
                L       K +       +  +G
Sbjct: 136 PEFKQLETTNVSLKESDAWPAEPQDAFG 163

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 56.7 bits (136), Expect = 2e-10
 Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 17/125 (13%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA---------SLSRSG-RSSLRDSWAN-NVIWHQ 106
           +LLV GG GF+GSH  R+ L                SL+ +G R++L    A+  + +  
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61

Query: 107 GNLLSSDSWKEALDGVTAVISC------VGGFGSNSYMYKINGTANINAIRAASEKGVKR 160
           G++  +      L GV A++               S   + N       ++ A + GV R
Sbjct: 62  GDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGR 121

Query: 161 FVYIS 165
            V++S
Sbjct: 122 VVHVS 126

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 54.7 bits (130), Expect = 8e-10
 Identities = 24/122 (19%), Positives = 45/122 (36%), Gaps = 14/122 (11%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWA-----NNVIWHQGNLLSS 112
           KLL+ GG GF+GS++   AL +G+ +       R    D+        N  +  G++ + 
Sbjct: 2   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK 61

Query: 113 DSWKEALDGV-------TAVISCVGGFGSN-SYMYKINGTANINAIRAASEKGVK-RFVY 163
           +     +           A    +     N    ++IN    +N + A  +       +Y
Sbjct: 62  NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIY 121

Query: 164 IS 165
            S
Sbjct: 122 SS 123

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.1 bits (126), Expect = 4e-09
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 33/161 (20%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSS-----------LRDSWANNVIWHQGN 108
           L+ G  G  GS++    L++G  V  + R   S             +     N+  H G+
Sbjct: 5   LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGD 64

Query: 109 LLSSDSWKEALDG--------VTAVISCVGGFGSNSYMYKIN--GTANI-NAIRAASEKG 157
           L  S    + ++         + A       F    Y   ++  GT  + +A++      
Sbjct: 65  LTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLIN 124

Query: 158 VKRFVYIS-AADFGVANYLLQG----------YYEGKRAAE 187
             +F   S +  +G    + Q           Y   K  A 
Sbjct: 125 SVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAY 165

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 50.9 bits (120), Expect = 2e-08
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 8/90 (8%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS--------LRDSWANNVIWHQGNL 109
           ++L++G  G++G H+ + +LD G     L R   +S        L    A+      G++
Sbjct: 5   RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 64

Query: 110 LSSDSWKEALDGVTAVISCVGGFGSNSYMY 139
               S  EA+  V  VIS VG     S + 
Sbjct: 65  DDHASLVEAVKNVDVVISTVGSLQIESQVN 94

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 50.9 bits (121), Expect = 2e-08
 Identities = 22/131 (16%), Positives = 42/131 (32%), Gaps = 23/131 (17%)

Query: 58  KLLVLGGNGFVGSHICREALDRG----LTVASLSRSGRSSLRDSWA--NNVIWHQGNLLS 111
           K+L+ GG GF+GS + R  +       + +  L+ +G        +  N   +   ++  
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICD 61

Query: 112 SDSWKEALDGVT-------AVISCVGGFGSN-SYMYKINGTANINAIRAASEKGVK---- 159
           S       +          A  S V    +  +   + N       +  A +        
Sbjct: 62  SAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGED 121

Query: 160 -----RFVYIS 165
                RF +IS
Sbjct: 122 KKNNFRFHHIS 132

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 50.6 bits (119), Expect = 2e-08
 Identities = 15/36 (41%), Positives = 20/36 (55%)

Query: 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRS 89
          P    +LV G NGFV SH+  + L+ G  V   +RS
Sbjct: 9  PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 49.6 bits (116), Expect = 5e-08
 Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 1/63 (1%)

Query: 58  KLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK 116
           ++L+LG NGF+G+H+    L      V  L     +  R     +  + +G++     W 
Sbjct: 2   RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWI 61

Query: 117 EAL 119
           E  
Sbjct: 62  EYH 64

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 49.0 bits (115), Expect = 5e-08
 Identities = 9/59 (15%), Positives = 20/59 (33%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK 116
           ++L+ G  G  G H+    L        ++ + ++       +N +     LL      
Sbjct: 4   RVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGS 62

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 48.3 bits (113), Expect = 2e-07
 Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 4/62 (6%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSR--SGRSSLRDS--WANNVIWHQGNLLSSD 113
           ++ V G  GF G  +       G TV   S       SL ++   A+ +    G++   +
Sbjct: 10  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQN 69

Query: 114 SW 115
             
Sbjct: 70  KL 71

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 47.1 bits (110), Expect = 2e-07
 Identities = 11/80 (13%), Positives = 27/80 (33%)

Query: 60  LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL 119
           LV G +G  G  + ++  +      +      +  ++          G++  +DS   A 
Sbjct: 7   LVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAF 66

Query: 120 DGVTAVISCVGGFGSNSYMY 139
            G+ A++            +
Sbjct: 67  QGIDALVILTSAVPKMKPGF 86

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.4 bits (111), Expect = 3e-07
 Identities = 24/122 (19%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 56  SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS------LRDSWANNVIWHQGNL 109
           S+ +LV GG G++GSH   E ++ G           S+      L     +++ +++ +L
Sbjct: 1   SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDL 60

Query: 110 LSSDSWKEAL-----DGVT--AVISCVGGFGSNSYMY-KINGTANINAIRAASEKGVKRF 161
                 ++       D V   A +  VG        Y   N    +  +    +  V +F
Sbjct: 61  CDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKF 120

Query: 162 VY 163
           V+
Sbjct: 121 VF 122

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 47.1 bits (110), Expect = 3e-07
 Identities = 8/32 (25%), Positives = 15/32 (46%)

Query: 58 KLLVLGGNGFVGSHICREALDRGLTVASLSRS 89
          K+L+ G NG +G  I ++   + + V      
Sbjct: 3  KILITGANGQLGREIQKQLKGKNVEVIPTDVQ 34

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 47.3 bits (111), Expect = 3e-07
 Identities = 16/99 (16%), Positives = 40/99 (40%), Gaps = 6/99 (6%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVA-----SLSRSG-RSSLRDSWANNVIWHQGNLLS 111
            ++V GG GF+GS+      +    V       L+ +G +++L     + V    G++  
Sbjct: 4   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIAD 63

Query: 112 SDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAI 150
           ++   +      A++       +++ +   +   + N I
Sbjct: 64  AELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFI 102

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 45.0 bits (105), Expect = 2e-06
 Identities = 27/128 (21%), Positives = 44/128 (34%), Gaps = 16/128 (12%)

Query: 53  PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSR----------SGRSSLRDSWANNV 102
           P   +  L+ G  GF+GS++    L     V  L              RS + +   +N 
Sbjct: 13  PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNF 72

Query: 103 IWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSY------MYKINGTANINAIRAASEK 156
            + QG++ + D    A  GV  V+                     N    +N + AA + 
Sbjct: 73  KFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA 132

Query: 157 GVKRFVYI 164
            V+ F Y 
Sbjct: 133 KVQSFTYA 140

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 44.5 bits (103), Expect = 3e-06
 Identities = 11/73 (15%), Positives = 22/73 (30%), Gaps = 15/73 (20%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117
            +L+ G  G VG  + R     G  +A    S                 G+  +     E
Sbjct: 2   NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE-------------FCGDFSNPKGVAE 48

Query: 118 ALDGV--TAVISC 128
            +  +    +++ 
Sbjct: 49  TVRKLRPDVIVNA 61

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 43.8 bits (102), Expect = 4e-06
 Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWA-----NNVIWHQGNLLSS 112
             LV G  G  G+++ +  L++G  V  L     S  R          ++ +  G++  +
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA 61

Query: 113 DSWKE 117
            S + 
Sbjct: 62  CSVQR 66

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (100), Expect = 7e-06
 Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 12/72 (16%)

Query: 56  SEKLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSS---------LRDSWANNVI 103
           +EK+LV GG G++GSH   E L+ G       +   + R           +++    +V 
Sbjct: 2   AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVE 61

Query: 104 WHQGNLLSSDSW 115
           + + ++L   + 
Sbjct: 62  FEEMDILDQGAL 73

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 43.0 bits (99), Expect = 9e-06
 Identities = 10/85 (11%), Positives = 26/85 (30%), Gaps = 22/85 (25%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTV---ASLSRSGRSS-------------------LR 95
           +++V+GG+G+ G         +   V    +L R                         +
Sbjct: 3   RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 62

Query: 96  DSWANNVIWHQGNLLSSDSWKEALD 120
                ++  + G++   +   E+  
Sbjct: 63  ALTGKSIELYVGDICDFEFLAESFK 87

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (97), Expect = 1e-05
 Identities = 11/58 (18%), Positives = 20/58 (34%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSW 115
            + +LG +G  G  + +E L++GL         R    D  A   +  +         
Sbjct: 16  SVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDD 73

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 42.3 bits (97), Expect = 1e-05
 Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 4/60 (6%)

Query: 60  LVLGGNGFVGSHICREALDRGLT----VASLSRSGRSSLRDSWANNVIWHQGNLLSSDSW 115
           +V GG GF+GS+I +   D+G+T    V +L    +              + + L     
Sbjct: 3   IVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMA 62

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 42.0 bits (97), Expect = 2e-05
 Identities = 15/96 (15%), Positives = 28/96 (29%), Gaps = 11/96 (11%)

Query: 58  KLLVLGGNGFVGSHICREALDRGLTVASLSRSG-----------RSSLRDSWANNVIWHQ 106
             L+ G  G  GS++    L +G  V  L R                  +     +  H 
Sbjct: 3   IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHY 62

Query: 107 GNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKIN 142
            +L  + S +  +D +           S+  +    
Sbjct: 63  ADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEI 98

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 37.5 bits (85), Expect = 7e-04
 Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 58  KLLVLGGNGFVGSHICREAL-DRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK 116
           ++LV GG G++GSH  R  L D   +V  +     +  +             L  SD  K
Sbjct: 4   RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	198
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.92
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.92
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.91
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.91
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.91
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.9
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.89
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.88
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.88
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.88
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.88
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.88
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.88
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.87
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.87
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.87
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.87
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.87
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.87
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.86
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.86
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.86
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.86
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.86
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.86
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.86
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.85
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.85
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.85
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.85
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.85
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.85
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.85
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.85
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.85
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.85
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.85
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.84
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.84
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.84
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.84
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.84
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.84
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.84
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.84
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.83
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.83
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.83
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.83
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.83
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.83
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.82
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.82
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.81
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.81
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.81
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.8
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.8
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.8
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.8
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.8
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.8
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.79
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.79
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.79
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.78
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.78
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.78
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.78
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.78
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.78
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.77
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.75
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.75
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.75
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.75
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.75
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.74
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.74
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.74
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.73
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.73
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.72
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.72
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.69
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.68
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.65
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.61
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.6
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.57
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.55
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.55
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.53
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.45
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.4
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.38
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.37
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.72
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.56
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.4
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.39
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.33
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	98.32
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.23
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.23
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.14
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.14
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.12
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.12
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	98.05
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.03
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	98.02
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.98
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.96
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.9
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.89
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.89
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.88
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.86
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.83
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.83
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.81
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.79
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.77
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.76
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.75
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.75
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.75
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.74
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.72
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.71
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.69
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.67
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.66
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.66
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.62
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.61
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.6
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.57
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.56
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.54
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	97.52
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.52
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.46
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.44
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.37
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.37
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.35
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.32
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	97.32
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.31
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.28
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.27
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.24
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.22
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.19
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.18
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.11
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.07
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.07
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.04
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.02
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.96
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.94
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.93
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.92
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.9
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	96.89
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.87
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	96.86
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.84
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.83
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.82
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.82
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.81
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.8
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.79
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	96.78
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.76
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	96.75
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.72
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	96.71
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	96.7
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	96.67
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.67
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.67
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.65
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.62
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	96.61
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	96.61
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.59
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	96.52
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.5
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.44
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.38
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.37
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	96.37
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	96.35
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	96.34
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.34
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.33
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.31
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	96.29
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	96.27
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.27
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.26
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	96.24
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	96.24
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	96.22
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.21
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.2
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	96.19
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	96.17
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	96.17
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.15
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.14
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	96.05
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.04
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.03
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	96.0
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.93
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.91
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	95.89
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	95.87
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	95.85
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.8
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.79
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	95.79
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	95.73
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.72
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	95.72
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	95.71
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.66
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	95.66
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	95.65
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	95.62
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	95.54
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	95.47
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	95.39
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	95.37
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.32
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	95.28
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.22
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	95.17
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	95.17
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	95.14
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	95.09
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.01
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	95.01
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.97
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	94.87
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	94.85
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	94.78
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	94.65
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	94.63
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	94.51
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	94.49
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	94.39
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.33
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.32
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	94.3
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	94.3
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	94.2
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	94.16
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	93.91
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	93.74
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.69
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	93.63
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	93.63
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	93.61
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	93.55
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	93.52
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	93.44
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	93.41
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	93.39
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.38
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.36
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	93.26
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.19
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	93.16
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	93.08
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	92.5
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	92.47
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	92.36
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	92.24
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	92.05
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	91.99
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	91.87
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	91.84
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	91.74
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	91.71
d1x74a1	359	2-methylacyl-CoA racemase Mcr {Mycobacterium tuber	91.45
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	91.35
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	91.28
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	91.05
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	91.01
d2afhe1	289	Nitrogenase iron protein {Azotobacter vinelandii [	90.89
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	90.7
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	90.63
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	90.48
d2vjma1	427	Formyl-CoA transferase {Oxalobacter formigenes [Ta	90.46
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	90.4
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	90.3
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	90.22
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	90.21
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	90.2
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	90.14
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	89.98
d1xk7a1	402	Crotonobetainyl-CoA:carnitine CoA-transferase, Cai	89.86
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.71
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	89.69
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	89.66
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	89.55
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	89.49
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.42
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	89.39
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	89.13
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	88.71
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	88.51
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	88.2
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	88.13
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	87.77
d1q7ea_	417	Hypothetical protein YfdW {Escherichia coli [TaxId	87.51
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	87.45
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	87.43
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	87.06
d1m6ia1	213	Apoptosis-inducing factor (AIF) {Human (Homo sapie	86.97
d1kdga1	360	Flavoprotein domain of flavocytochrome cellobiose	86.27
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	85.8
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	85.54
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	85.41
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	85.39
d1ps9a2	162	2,4-dienoyl-CoA reductase, C-terminal domain {Esch	84.91
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	84.77
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	84.68
d1ihua1	296	Arsenite-translocating ATPase ArsA {Escherichia co	84.66
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	84.58
d1cjca1	225	Adrenodoxin reductase of mitochondrial p450 system	84.56
d1lqta1	216	Ferredoxin:NADP reductase FprA {Mycobacterium tube	84.3
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	83.9
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	83.6
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	82.32
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	82.25
d1trba2	126	Thioredoxin reductase {Escherichia coli [TaxId: 56	82.0
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	81.56
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	81.3
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	81.18
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	80.97
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	80.86
d1mo9a1	261	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	80.28
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	80.23

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=2.6e-25  Score=180.92  Aligned_cols=138  Identities=20%  Similarity=0.194  Sum_probs=109.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc----------ccccCCCCeEEEEccCCCHHHHHHHhcC--CCE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS----------LRDSWANNVIWHQGNLLSSDSWKEALDG--VTA  124 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~----------~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~  124 (198)
                      |+|||||||||||++|+++|+++|++|++++|.....          .......+++++.+|++|.+++.+++++  +|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            7899999999999999999999999999999964310          0112245799999999999999999984  699


Q ss_pred             EEEccccCC------CCccceehhhHHHHHHHHHHHHcCCC---EEEEeec-cccCCC----------CCCcchHHHHHH
Q 029125          125 VISCVGGFG------SNSYMYKINGTANINAIRAASEKGVK---RFVYISA-ADFGVA----------NYLLQGYYEGKR  184 (198)
Q Consensus       125 vi~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~---~~v~~Ss-~~~~~~----------~~~~~~Y~~sK~  184 (198)
                      |||+|+...      ++...+++|+.|+.+++++|++.+++   ||||+|| .+||.+          ..|.++|+.+|+
T Consensus        82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~  161 (357)
T d1db3a_          82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKL  161 (357)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHH
T ss_pred             EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHH
Confidence            999998643      22456789999999999999987653   7999999 667642          245678999999


Q ss_pred             HHHHHHHhhC
Q 029125          185 AAETELLTRY  194 (198)
Q Consensus       185 ~~e~~l~~~~  194 (198)
                      ++|.+++.+.
T Consensus       162 ~~E~~~~~~~  171 (357)
T d1db3a_         162 YAYWITVNYR  171 (357)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998764

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=2.6e-24  Score=173.55  Aligned_cols=137  Identities=24%  Similarity=0.331  Sum_probs=113.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc------cccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL------RDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISC  128 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~------~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~  128 (198)
                      |+||||||+||||++|++.|+++|++|++++|-.....      ......++.++++|++|.+.+.++++  ++|+|||+
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            57999999999999999999999999999987432211      11224589999999999999999988  79999999


Q ss_pred             cccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCC-----------CCCCcchHHHHHHHHHHHH
Q 029125          129 VGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGV-----------ANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       129 ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~-----------~~~~~~~Y~~sK~~~e~~l  190 (198)
                      |+...      ++...+++|+.|+++++++|++.++++||++|| .+|+.           ...+...|+.+|.++|.++
T Consensus        81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~  160 (338)
T d1udca_          81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHH
Confidence            98543      234678999999999999999999999999999 55542           1245778999999999998


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      .+.
T Consensus       161 ~~~  163 (338)
T d1udca_         161 TDL  163 (338)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            864

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.5e-23  Score=158.06  Aligned_cols=137  Identities=18%  Similarity=0.182  Sum_probs=114.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS  134 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~  134 (198)
                      .||||+||||||+||++++++|+++|++|++++|++.+.. .....+++++.+|++|.+++.++++++|+|||++|... 
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~-   79 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP-SEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRN-   79 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSC-SSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTT-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcc-cccccccccccccccchhhHHHHhcCCCEEEEEeccCC-
Confidence            4789999999999999999999999999999999866532 23346799999999999999999999999999998743 


Q ss_pred             CccceehhhHHHHHHHHHHHHcCCCEEEEeecc-ccCCC---CCCcchHHHHHHHHHHHHHhh
Q 029125          135 NSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA---NYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       135 ~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~-~~~~~---~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ......++..++.++++++++++++|||++||. .+..+   ......|...|..+|+++++.
T Consensus        80 ~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~  142 (205)
T d1hdoa_          80 DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRES  142 (205)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHHT
T ss_pred             chhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccccccccccchHHHHHHHHHHhc
Confidence            334457888999999999999999999999984 34332   223347889999999999875

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.91  E-value=4.8e-24  Score=173.27  Aligned_cols=143  Identities=22%  Similarity=0.241  Sum_probs=117.7

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           51 VPPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        51 ~~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      -.+.++|+||||||+||||++|+++|+++|++|+++++....... .......+..+|+.|.+.+..+++++|+|||+|+
T Consensus        10 ~~~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~   88 (363)
T d2c5aa1          10 YWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-EDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAA   88 (363)
T ss_dssp             SCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-GGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh-hhcccCcEEEeechhHHHHHHHhhcCCeEeeccc
Confidence            346678899999999999999999999999999999986554322 1234568889999999999999999999999997


Q ss_pred             cCC-------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCC-----------------CCCCcchHHHHHHH
Q 029125          131 GFG-------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGV-----------------ANYLLQGYYEGKRA  185 (198)
Q Consensus       131 ~~~-------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~-----------------~~~~~~~Y~~sK~~  185 (198)
                      ...       .+...+..|+.++.++++++.+.++++||++|| ..|+.                 +..|.+.|+.+|.+
T Consensus        89 ~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~  168 (363)
T d2c5aa1          89 DMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLA  168 (363)
T ss_dssp             CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHH
T ss_pred             ccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHH
Confidence            543       234567889999999999999999999999999 45542                 12456789999999


Q ss_pred             HHHHHHhhC
Q 029125          186 AETELLTRY  194 (198)
Q Consensus       186 ~e~~l~~~~  194 (198)
                      +|.+++++.
T Consensus       169 ~E~~~~~~~  177 (363)
T d2c5aa1         169 TEELCKHYN  177 (363)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998754

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=5e-24  Score=172.35  Aligned_cols=137  Identities=20%  Similarity=0.250  Sum_probs=113.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc------cccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL------RDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISC  128 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~------~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~  128 (198)
                      |.||||||+||||++|+++|+++|++|+++++-.....      ......+++++.+|++|.+.+..+++  ++|+|||+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            57999999999999999999999999999986433211      12234678999999999999999887  79999999


Q ss_pred             cccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC--------------CCCcchHHHHHHHHH
Q 029125          129 VGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA--------------NYLLQGYYEGKRAAE  187 (198)
Q Consensus       129 ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~--------------~~~~~~Y~~sK~~~e  187 (198)
                      |+...      .+...+.+|+.++.+++++|++.++++||++|| .+|+..              ..|.+.|+.+|.++|
T Consensus        82 Aa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E  161 (347)
T d1z45a2          82 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIE  161 (347)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             cccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHH
Confidence            98653      234567899999999999999999999999999 566532              235678999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+++++
T Consensus       162 ~~~~~~  167 (347)
T d1z45a2         162 NILNDL  167 (347)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998875

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.8e-23  Score=168.54  Aligned_cols=137  Identities=20%  Similarity=0.235  Sum_probs=109.2

Q ss_pred             CeE-EEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc-----------ccccCCCCeEEEEccCCCHHHHHHHhc--CC
Q 029125           57 EKL-LVLGGNGFVGSHICREALDRGLTVASLSRSGRSS-----------LRDSWANNVIWHQGNLLSSDSWKEALD--GV  122 (198)
Q Consensus        57 ~~v-lvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~-----------~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~  122 (198)
                      ||| |||||+||||++|+++|+++|++|++++|.....           .......+++++.+|++|.+.+..+++  ++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            577 9999999999999999999999999999965321           011113478999999999999999886  57


Q ss_pred             CEEEEccccCC------CCccceehhhHHHHHHHHHHHHcCC---CEEEEeec-cccCCC----------CCCcchHHHH
Q 029125          123 TAVISCVGGFG------SNSYMYKINGTANINAIRAASEKGV---KRFVYISA-ADFGVA----------NYLLQGYYEG  182 (198)
Q Consensus       123 d~vi~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~---~~~v~~Ss-~~~~~~----------~~~~~~Y~~s  182 (198)
                      ++++|+++...      .....+++|+.|+.++++++++.++   ++|||+|| .+||.+          ..|.++|+.|
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~s  160 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA  160 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHH
Confidence            89999987543      3345578999999999999998765   48999999 667642          2446789999


Q ss_pred             HHHHHHHHHhh
Q 029125          183 KRAAETELLTR  193 (198)
Q Consensus       183 K~~~e~~l~~~  193 (198)
                      |.++|++++++
T Consensus       161 K~~aE~~~~~~  171 (347)
T d1t2aa_         161 KLYAYWIVVNF  171 (347)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999999875

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.89  E-value=5.5e-23  Score=167.37  Aligned_cols=138  Identities=17%  Similarity=0.202  Sum_probs=108.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEE-EeecCCCC-c---cc-ccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVA-SLSRSGRS-S---LR-DSWANNVIWHQGNLLSSDSWKEALD--GVTAVISC  128 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~-~l~r~~~~-~---~~-~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~  128 (198)
                      |+||||||+||||++|+++|+++|++|+ ++++.... .   .. .....+++++.+|++|.+.+..+++  ++|+|||+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            5899999999999999999999999754 45443211 1   11 1123579999999999999999887  58999999


Q ss_pred             cccCC------CCccceehhhHHHHHHHHHHHHcC---------CCEEEEeec-cccCCC--------------------
Q 029125          129 VGGFG------SNSYMYKINGTANINAIRAASEKG---------VKRFVYISA-ADFGVA--------------------  172 (198)
Q Consensus       129 ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~---------~~~~v~~Ss-~~~~~~--------------------  172 (198)
                      |+...      ++...+++|+.|+.+++++|.+.+         +++|||+|| .+||..                    
T Consensus        81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~  160 (361)
T d1kewa_          81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             ccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCC
Confidence            98644      456678999999999999997754         458999999 667532                    


Q ss_pred             CCCcchHHHHHHHHHHHHHhhC
Q 029125          173 NYLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       173 ~~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                      ..|.+.|+.+|.++|.+++.+.
T Consensus       161 ~~p~s~Yg~sK~~~E~~~~~~~  182 (361)
T d1kewa_         161 YAPSSPYSASKASSDHLVRAWR  182 (361)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHH
Confidence            2345679999999999998754

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=5.1e-23  Score=157.95  Aligned_cols=136  Identities=18%  Similarity=0.251  Sum_probs=114.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      ++++|+|||||||||++|+++|+++|.  +|++++|++..... .....+....+|+.+.+++..+++++|++||++|..
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~-~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~   91 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-EAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT   91 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-GGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc-cccceeeeeeeccccccccccccccccccccccccc
Confidence            457899999999999999999999994  89999998655322 234578888899999999999999999999999864


Q ss_pred             C---CCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          133 G---SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       133 ~---~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      .   .+...+++|+.++.+++++|.+.++++|||+|+..  ....+.+.|+.+|+.+|+.+.+.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~--~~~~~~~~Y~~~K~~~E~~l~~~  153 (232)
T d2bkaa1          92 RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKG--ADKSSNFLYLQVKGEVEAKVEEL  153 (232)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTT--CCTTCSSHHHHHHHHHHHHHHTT
T ss_pred             ccccchhhhhhhcccccceeeecccccCccccccCCccc--cccCccchhHHHHHHhhhccccc
Confidence            2   23456789999999999999999999999999952  33445578999999999999875

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=5.1e-24  Score=170.24  Aligned_cols=133  Identities=23%  Similarity=0.253  Sum_probs=102.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc----cCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD----SWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      +|+||||||+||||++|+++|+++|++|++++|........    .....+.+...|+     +..++.++|+|||+|+.
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~~~~~~d~VihlAa~   75 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV-----VEPLYIEVDQIYHLASP   75 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCT-----TSCCCCCCSEEEECCSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHH-----HHHHHcCCCEEEECccc
Confidence            47999999999999999999999999999998743321111    1123455555554     34456789999999985


Q ss_pred             CC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC---------------CCCcchHHHHHHHHHHH
Q 029125          132 FG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA---------------NYLLQGYYEGKRAAETE  189 (198)
Q Consensus       132 ~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~---------------~~~~~~Y~~sK~~~e~~  189 (198)
                      ..      ++...+++|+.|+.+++++|++.++ ++||+|| .+|+.+               ..|.++|+.+|.++|.+
T Consensus        76 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~  154 (312)
T d2b69a1          76 ASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETM  154 (312)
T ss_dssp             CSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHH
Confidence            43      3345689999999999999999887 8999998 667642               23567899999999999


Q ss_pred             HHhhC
Q 029125          190 LLTRY  194 (198)
Q Consensus       190 l~~~~  194 (198)
                      ++.+.
T Consensus       155 ~~~~~  159 (312)
T d2b69a1         155 CYAYM  159 (312)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98764

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.88  E-value=1.2e-22  Score=164.07  Aligned_cols=139  Identities=17%  Similarity=0.190  Sum_probs=111.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC------cccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS------SLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~------~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~  128 (198)
                      +||+|||||||||||++|+++|+++|++|.+++++...      ........+++++.+|+.|.+.+..++++.|.|+|+
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~   80 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHY   80 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence            47999999999999999999999999876665543211      111223468999999999999999999999999999


Q ss_pred             cccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCC----------------------CCCCcchH
Q 029125          129 VGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGV----------------------ANYLLQGY  179 (198)
Q Consensus       129 ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~----------------------~~~~~~~Y  179 (198)
                      |+...      ++...+++|+.|+.++++++...+. +++++|| .+|+.                      +..|.+.|
T Consensus        81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y  159 (346)
T d1oc2a_          81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPY  159 (346)
T ss_dssp             CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHH
T ss_pred             hhcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCcccccccCCCCCCCCHH
Confidence            98643      4466789999999999999998886 6777776 66653                      12345789


Q ss_pred             HHHHHHHHHHHHhhC
Q 029125          180 YEGKRAAETELLTRY  194 (198)
Q Consensus       180 ~~sK~~~e~~l~~~~  194 (198)
                      +.+|.++|.+++.+.
T Consensus       160 ~~sK~~~E~~~~~~~  174 (346)
T d1oc2a_         160 SSTKAASDLIVKAWV  174 (346)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999998754

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=1.3e-22  Score=163.28  Aligned_cols=137  Identities=18%  Similarity=0.265  Sum_probs=107.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHH-HhcCCCEEEEccccCC-
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE-ALDGVTAVISCVGGFG-  133 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~d~vi~~ag~~~-  133 (198)
                      ||||||||+||||++|+++|+++| ++|+++++............+++++.+|+++.+++.+ +++++|+|||+|+... 
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~~   80 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP   80 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccccc
Confidence            589999999999999999999999 5899998865443333335689999999988766554 6778999999999654 


Q ss_pred             -----CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC-----------------CCCcchHHHHHHHHHHHH
Q 029125          134 -----SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA-----------------NYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       134 -----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~-----------------~~~~~~Y~~sK~~~e~~l  190 (198)
                           .+...+.+|+.|+.++++++.+.+.+ ++|+|| .+|+..                 ..|...|+.+|.++|+++
T Consensus        81 ~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~-~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~  159 (342)
T d2blla1          81 IEYTRNPLRVFELDFEENLRIIRYCVKYRKR-IIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI  159 (342)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCE-EEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHH
T ss_pred             cccccCCcccccccccccccccccccccccc-ccccccccccccccccccccccccccccccCCCcchhhhcccchhhhh
Confidence                 23456889999999999999998874 456666 555432                 134467999999999999


Q ss_pred             HhhC
Q 029125          191 LTRY  194 (198)
Q Consensus       191 ~~~~  194 (198)
                      ..+.
T Consensus       160 ~~~~  163 (342)
T d2blla1         160 WAYG  163 (342)
T ss_dssp             HHHH
T ss_pred             hhhh
Confidence            8764

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.88  E-value=2.6e-22  Score=161.73  Aligned_cols=140  Identities=21%  Similarity=0.201  Sum_probs=116.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc----------cccCCCCeEEEEccCCCHHHHHHHhcCCCE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL----------RDSWANNVIWHQGNLLSSDSWKEALDGVTA  124 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~----------~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~  124 (198)
                      ++|+|||||||||||++|+++|+++|++|++++|......          ......+++++.+|+.|...+.....+.+.
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~   94 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY   94 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccccc
Confidence            5689999999999999999999999999999997543211          011135789999999999999998999999


Q ss_pred             EEEccccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCC----------CCCCcchHHHHHHHHH
Q 029125          125 VISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGV----------ANYLLQGYYEGKRAAE  187 (198)
Q Consensus       125 vi~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~----------~~~~~~~Y~~sK~~~e  187 (198)
                      ++|+++...      ++...+++|+.|+.+++++|.+.++++|||+|| .+||.          +..|.+.|+.+|.++|
T Consensus        95 v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E  174 (341)
T d1sb8a_          95 VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNE  174 (341)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHH
T ss_pred             cccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHH
Confidence            999987533      335578999999999999999999999999999 66764          2346689999999999


Q ss_pred             HHHHhhC
Q 029125          188 TELLTRY  194 (198)
Q Consensus       188 ~~l~~~~  194 (198)
                      .+++.+.
T Consensus       175 ~~~~~~~  181 (341)
T d1sb8a_         175 LYADVFS  181 (341)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9988653

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=1.3e-22  Score=161.43  Aligned_cols=124  Identities=20%  Similarity=0.213  Sum_probs=102.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEccccCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFG  133 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~~  133 (198)
                      +|+|||||||||||++|+++|+++|+.|+++++..+               +|+.|.+.+.++++  .+|.|||+++...
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~---------------~~~~~~~~~~~~~~~~~~d~v~~~a~~~~   66 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE---------------LNLLDSRAVHDFFASERIDQVYLAAAKVG   66 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT---------------CCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh---------------ccccCHHHHHHHHhhcCCCEEEEcchhcc
Confidence            579999999999999999999999999888765421               48999999998876  5899999997543


Q ss_pred             -------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCCC---------------CCcchHHHHHHHHHHHH
Q 029125          134 -------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN---------------YLLQGYYEGKRAAETEL  190 (198)
Q Consensus       134 -------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~~---------------~~~~~Y~~sK~~~e~~l  190 (198)
                             .....+.+|+.|+.+++++|.+.++++|||+|| .+|+...               ++.++|+.+|.++|.++
T Consensus        67 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~  146 (315)
T d1e6ua_          67 GIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLC  146 (315)
T ss_dssp             CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHH
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHH
Confidence                   234457899999999999999999999999999 6676321               22357999999999999


Q ss_pred             HhhC
Q 029125          191 LTRY  194 (198)
Q Consensus       191 ~~~~  194 (198)
                      +.+.
T Consensus       147 ~~~~  150 (315)
T d1e6ua_         147 ESYN  150 (315)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.87  E-value=5.9e-22  Score=152.61  Aligned_cols=136  Identities=20%  Similarity=0.175  Sum_probs=109.2

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      ++.++|+++||||+++||++++++|+++|++|++++|+...      ..++..+.+|++|+++++++++       ++|+
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   76 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA------PKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV   76 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC------CTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch------hcCceEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            45688999999999999999999999999999999998654      2466889999999998887764       5899


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      +|||||...          .|+..+++|+.+++.+.+.+    .+.+.++||++||...-.+.+....|+.+|++.+.+.
T Consensus        77 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt  156 (237)
T d1uzma1          77 LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMA  156 (237)
T ss_dssp             EEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHH
T ss_pred             EEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHHHHHHH
Confidence            999999542          34567899999998777665    4556679999999654455667789999999999887


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       157 ~~l  159 (237)
T d1uzma1         157 RSI  159 (237)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            754

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.87  E-value=2.5e-22  Score=160.71  Aligned_cols=138  Identities=21%  Similarity=0.252  Sum_probs=111.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeE------EEeecCCCC-----cccccCCCCeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTV------ASLSRSGRS-----SLRDSWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V------~~l~r~~~~-----~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      |+|+|||||||||++|+++|+++|++|      +.+++....     ........++.++.+|+.+...+......+|.|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   80 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence            589999999999999999999999754      444432111     111122457999999999999999999999999


Q ss_pred             EEccccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC----------CCCcchHHHHHHHHHH
Q 029125          126 ISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYLLQGYYEGKRAAET  188 (198)
Q Consensus       126 i~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~----------~~~~~~Y~~sK~~~e~  188 (198)
                      +|+|+...      .....+++|+.|+.+++++|.+.++++|||+|| .+|+..          ..|.+.|+.+|.++|.
T Consensus        81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  160 (322)
T d1r6da_          81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL  160 (322)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            99997643      445678899999999999999999999999999 566642          3456799999999999


Q ss_pred             HHHhhC
Q 029125          189 ELLTRY  194 (198)
Q Consensus       189 ~l~~~~  194 (198)
                      +++.+.
T Consensus       161 ~~~~~~  166 (322)
T d1r6da_         161 VARAYH  166 (322)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998764

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.6e-21  Score=157.15  Aligned_cols=138  Identities=23%  Similarity=0.315  Sum_probs=111.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc------c------cccCCCCeEEEEccCCCHHHHHHHhcC--
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS------L------RDSWANNVIWHQGNLLSSDSWKEALDG--  121 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~------~------~~~~~~~~~~~~~D~~d~~~~~~~~~~--  121 (198)
                      .|||||||||||||++|+++|+++|++|+++++.....      .      ......++.++.+|++|.+.+..++.+  
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~   81 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccc
Confidence            36899999999999999999999999999998632110      0      011246789999999999999998864  


Q ss_pred             CCEEEEccccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCCC-----------CCCcchHHHHH
Q 029125          122 VTAVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA-----------NYLLQGYYEGK  183 (198)
Q Consensus       122 ~d~vi~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~~-----------~~~~~~Y~~sK  183 (198)
                      +++++|+|+...      ++...+++|+.|+.++++++++.++++|+|+|| ..|+..           ..+.++|+.+|
T Consensus        82 ~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k  161 (346)
T d1ek6a_          82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSK  161 (346)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHH
T ss_pred             cccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHHH
Confidence            568999998644      345668999999999999999999999999998 444421           34567899999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      ..+|..+++.
T Consensus       162 ~~~e~~~~~~  171 (346)
T d1ek6a_         162 FFIEEMIRDL  171 (346)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999988865

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.87  E-value=9.8e-22  Score=152.24  Aligned_cols=140  Identities=11%  Similarity=0.093  Sum_probs=114.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc---ccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      .++|+++||||+++||+++++.|+++|++|++.+|++.+...   .....++..+.+|++|+++++++++       ++|
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD   82 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   82 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999999997654221   2234678999999999998887764       689


Q ss_pred             EEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          124 AVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      ++|||||...          .|+..+++|+.+++.+.+++    ++.+.++||++||.....+.+....|+.+|++.+.+
T Consensus        83 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l  162 (247)
T d2ew8a1          83 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGF  162 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccHHHH
Confidence            9999999643          34567899999999888876    445667999999966556667778999999999987


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      .+..
T Consensus       163 tk~l  166 (247)
T d2ew8a1         163 TRAL  166 (247)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7754

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.87  E-value=5e-22  Score=153.63  Aligned_cols=141  Identities=20%  Similarity=0.214  Sum_probs=114.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc--cccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      ..++|+++||||+++||+++++.|+++|++|++.+|++++..  ......++.++.+|++|+++++++++       ++|
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   82 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLH   82 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCe
Confidence            467899999999999999999999999999999999864421  12234578899999999998887764       589


Q ss_pred             EEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          124 AVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      ++|||||...          .|+..+++|+.+++.+.+.+    .+.+..+||++||...-.+.+....|+.+|++.+.+
T Consensus        83 ilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~l  162 (244)
T d1nffa_          83 VLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGL  162 (244)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHHHHH
Confidence            9999999643          24567899999999888766    344567999999965555666778999999999988


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      .+..
T Consensus       163 tk~l  166 (244)
T d1nffa_         163 TKST  166 (244)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7754

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.87  E-value=8.9e-23  Score=164.75  Aligned_cols=141  Identities=25%  Similarity=0.271  Sum_probs=110.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-------ccCCCCeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-------~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      .+.+++||||||+||||++|+++|+++|++|++++|+..+...       ........++.+|+.|.+.+.+++.++|.|
T Consensus         8 ~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v   87 (342)
T d1y1pa1           8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV   87 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred             CCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhh
Confidence            3568999999999999999999999999999999997543111       111223456789999999999999999999


Q ss_pred             EEccccCCC---CccceehhhHHHHHHHHHHHHc-CCCEEEEeeccc--cCC----------------------------
Q 029125          126 ISCVGGFGS---NSYMYKINGTANINAIRAASEK-GVKRFVYISAAD--FGV----------------------------  171 (198)
Q Consensus       126 i~~ag~~~~---~~~~~~~n~~~~~~~~~a~~~~-~~~~~v~~Ss~~--~~~----------------------------  171 (198)
                      +|+++....   +...+..|+.|+.+++++|.+. ++++|||+||+.  ++.                            
T Consensus        88 ~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~  167 (342)
T d1y1pa1          88 AHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPES  167 (342)
T ss_dssp             EECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTT
T ss_pred             hhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccccccccccc
Confidence            999986542   3445678999999999999886 689999999942  110                            


Q ss_pred             -CCCCcchHHHHHHHHHHHHHhh
Q 029125          172 -ANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       172 -~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                       +..+.++|+.+|..+|.+++.+
T Consensus       168 ~~~~p~~~Y~~sK~~~E~~~~~~  190 (342)
T d1y1pa1         168 DPQKSLWVYAASKTEAELAAWKF  190 (342)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcCcccchhHhHHHHHHHh
Confidence             1223467999999999987655

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.86  E-value=1.1e-21  Score=152.59  Aligned_cols=140  Identities=15%  Similarity=0.174  Sum_probs=113.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++|+++||||+++||++++++|+++|++|++++|+.++...  .....++.++.+|++|+++++++++       ++|+
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (254)
T d1hdca_           3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence            578999999999999999999999999999999998644211  2234578999999999999887764       6899


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      +|||||...          .|+..+++|+.+++.+.+++    ++.+..+||++||...-.+.+....|+.+|++.+.+.
T Consensus        83 lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt  162 (254)
T d1hdca_          83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLS  162 (254)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             EEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHHHHHHH
Confidence            999999543          24567899999999888876    3456679999999655556667789999999999887


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       163 ~~l  165 (254)
T d1hdca_         163 KLA  165 (254)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            754

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.86  E-value=2.1e-22  Score=165.21  Aligned_cols=139  Identities=14%  Similarity=0.199  Sum_probs=105.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeec---C-------CC---Cc--c-------cccCCCCeEEEEccCCCHH
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSR---S-------GR---SS--L-------RDSWANNVIWHQGNLLSSD  113 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r---~-------~~---~~--~-------~~~~~~~~~~~~~D~~d~~  113 (198)
                      +|+|||||||||||++|+++|+++|++|+++|.   +       ..   +.  .       ......+++++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            589999999999999999999999999999862   0       00   00  0       0011357899999999999


Q ss_pred             HHHHHhc--CCCEEEEccccCCC---------CccceehhhHHHHHHHHHHHHcCCC-EEEEeecc-ccCC---------
Q 029125          114 SWKEALD--GVTAVISCVGGFGS---------NSYMYKINGTANINAIRAASEKGVK-RFVYISAA-DFGV---------  171 (198)
Q Consensus       114 ~~~~~~~--~~d~vi~~ag~~~~---------~~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~Ss~-~~~~---------  171 (198)
                      .+..+++  ++|+|||+|+....         ....+.+|+.|+.+++++|++.+++ ++++.||. .|+.         
T Consensus        81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~  160 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGY  160 (393)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred             HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccccc
Confidence            9999997  57999999985321         1245789999999999999998766 56666663 3432         


Q ss_pred             --------------CCCCcchHHHHHHHHHHHHHhhC
Q 029125          172 --------------ANYLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       172 --------------~~~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                                    +..|.++|+.+|+++|.++..+.
T Consensus       161 ~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~  197 (393)
T d1i24a_         161 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTC  197 (393)
T ss_dssp             EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccHHHHHhhhhcccccccc
Confidence                          23455689999999999987653

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.86  E-value=1.6e-21  Score=155.81  Aligned_cols=136  Identities=21%  Similarity=0.281  Sum_probs=107.3

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhcC--CCEEEEccc
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALDG--VTAVISCVG  130 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi~~ag  130 (198)
                      |||||||+||||++|+++|+++|++|+++++-......     .....+++++.+|++|.+.+.+++++  +|+|||+|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence            79999999999999999999999999999753222111     11246899999999999999999875  699999998


Q ss_pred             cCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-ccc-CC--------------------------CCCCc
Q 029125          131 GFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADF-GV--------------------------ANYLL  176 (198)
Q Consensus       131 ~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~-~~--------------------------~~~~~  176 (198)
                      ...      ++...+++|+.|+.++++++.+.+++++++.|| ..+ +.                          ...+.
T Consensus        82 ~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (338)
T d1orra_          82 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFH  161 (338)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCC
T ss_pred             cccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccccc
Confidence            654      335678899999999999999999887766666 332 21                          11345


Q ss_pred             chHHHHHHHHHHHHHhh
Q 029125          177 QGYYEGKRAAETELLTR  193 (198)
Q Consensus       177 ~~Y~~sK~~~e~~l~~~  193 (198)
                      +.|+.+|...|.++...
T Consensus       162 ~~y~~~k~~~e~~~~~~  178 (338)
T d1orra_         162 SPYGCSKGAADQYMLDY  178 (338)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             cccccccchhhhhhhhh
Confidence            78999999999887654

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.86  E-value=1.3e-21  Score=151.57  Aligned_cols=140  Identities=16%  Similarity=0.056  Sum_probs=112.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEE
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAV  125 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v  125 (198)
                      ..++|+++||||+++||+++++.|+++|++|++++|+++.... ....+..++++|++|+++++++++       ++|++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL   80 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEV-AEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVL   80 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHH-HHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeE
Confidence            3578999999999999999999999999999999998654211 111246788999999988887764       68999


Q ss_pred             EEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 029125          126 ISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       126 i~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      |||||...          +|+..+++|+.+++++.+++.    +.+..+||++||.....+.+...+|+.+|++.+.+.+
T Consensus        81 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk  160 (248)
T d2d1ya1          81 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTR  160 (248)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHH
T ss_pred             EEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHHHHHHH
Confidence            99999542          245678999999998888874    4456699999996555566778899999999998876


Q ss_pred             hh
Q 029125          192 TR  193 (198)
Q Consensus       192 ~~  193 (198)
                      ..
T Consensus       161 ~l  162 (248)
T d2d1ya1         161 SL  162 (248)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.86  E-value=1.7e-21  Score=155.21  Aligned_cols=138  Identities=18%  Similarity=0.161  Sum_probs=109.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEcc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCV  129 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~a  129 (198)
                      |+|||||||||||++|+++|+++|++|++++|.......     .....+++++.+|++|.+.+...+.  ..++++|++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            689999999999999999999999999999997543211     1123578999999999999998776  467888888


Q ss_pred             ccCC------CCccceehhhHHHHHHHHHHHHcCCC-EEEEeecc-ccCC----------CCCCcchHHHHHHHHHHHHH
Q 029125          130 GGFG------SNSYMYKINGTANINAIRAASEKGVK-RFVYISAA-DFGV----------ANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       130 g~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~Ss~-~~~~----------~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      +...      .+...+.+|+.|+.+++++|.+.+.+ +|++.||. .|+.          +..+.++|+.+|.++|.+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~  160 (321)
T d1rpna_          81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITV  160 (321)
T ss_dssp             SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHH
Confidence            7532      33456889999999999999998855 77777774 4432          23467899999999999988


Q ss_pred             hhC
Q 029125          192 TRY  194 (198)
Q Consensus       192 ~~~  194 (198)
                      ++.
T Consensus       161 ~~~  163 (321)
T d1rpna_         161 NYR  163 (321)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            753

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.86  E-value=2.9e-21  Score=157.89  Aligned_cols=139  Identities=19%  Similarity=0.211  Sum_probs=109.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHH-CCCeEEEeecCC---CC-------------------cccccCCCCeEEEEccCCCH
Q 029125           56 SEKLLVLGGNGFVGSHICREALD-RGLTVASLSRSG---RS-------------------SLRDSWANNVIWHQGNLLSS  112 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~-~g~~V~~l~r~~---~~-------------------~~~~~~~~~~~~~~~D~~d~  112 (198)
                      .|+||||||+||||++|+++|++ .|++|+++++-.   ..                   .........+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            46999999999999999999996 689999997411   00                   00011134688999999999


Q ss_pred             HHHHHHhc---CCCEEEEccccCC------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCC-----------
Q 029125          113 DSWKEALD---GVTAVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGV-----------  171 (198)
Q Consensus       113 ~~~~~~~~---~~d~vi~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~-----------  171 (198)
                      +.+.++++   ++|+|||+|+...      .....+++|+.++.++++++.+.++++++++|+ ..|+.           
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  161 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence            99998885   5799999998654      234457899999999999999999999999888 44431           


Q ss_pred             ------CCCCcchHHHHHHHHHHHHHhhC
Q 029125          172 ------ANYLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       172 ------~~~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                            ...|.+.|+.+|...|.+++++.
T Consensus       162 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~  190 (383)
T d1gy8a_         162 PIDINAKKSPESPYGESKLIAERMIRDCA  190 (383)
T ss_dssp             CBCTTSCCBCSSHHHHHHHHHHHHHHHHH
T ss_pred             ccccccCCCCCCHHHhhHhHHHHHHHHHH
Confidence                  23457889999999999998764

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=4.8e-22  Score=153.63  Aligned_cols=140  Identities=17%  Similarity=0.071  Sum_probs=112.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc--cccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++|+++||||+++||+++++.|+++|++|++++|+++...  ......+...+.+|++|+++++++++       ++|+
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI   81 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence            46899999999999999999999999999999999864421  12223567889999999998887765       5899


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      +|||||...          .|+..+++|+.+++.+.+++    ++.+.++||++||.....+.+....|+.+|++.+.+.
T Consensus        82 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt  161 (243)
T d1q7ba_          82 LVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFS  161 (243)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred             ehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHHHHH
Confidence            999998542          34567899999999888877    4455679999999544445566789999999999887


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       162 ~~l  164 (243)
T d1q7ba_         162 KSL  164 (243)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            754

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.85  E-value=1.7e-21  Score=151.65  Aligned_cols=140  Identities=11%  Similarity=0.098  Sum_probs=112.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc--cccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++|+++||||+++||+++++.|+++|++|++.+|+.++..  ......++..+.+|++|++++.++++       ++|+
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   82 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI   82 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            56899999999999999999999999999999999754311  12235678999999999999887765       6899


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHHH----Hc-CCCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAAS----EK-GVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~-~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      +|||||...          .|+..+++|+.+++.+.+++.    +. ...+||++||.....+.+....|+.+|++.+.+
T Consensus        83 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l  162 (256)
T d1k2wa_          83 LVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISL  162 (256)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhHHHHH
Confidence            999999643          245678999999998887653    22 346999999965556667778999999999988


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      .+..
T Consensus       163 t~~l  166 (256)
T d1k2wa_         163 TQSA  166 (256)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7754

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.85  E-value=1.7e-21  Score=151.99  Aligned_cols=140  Identities=15%  Similarity=0.157  Sum_probs=112.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-------ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-------~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      .++|+++||||+++||++++++|+++|++|++.+|+.....+       .....++.++.+|++|+++++++++      
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            468999999999999999999999999999999997533211       1224578899999999999888765      


Q ss_pred             -CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                       ++|++|||||...          .|+..+++|+.+++.+.+++    ++.+..+||++||...-.+.+....|+.+|++
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa  161 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHG  161 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhhh
Confidence             5899999999542          24567899999998777776    44566799999996555566677899999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+.+..
T Consensus       162 l~~lt~~l  169 (260)
T d1x1ta1         162 VVGFTKVT  169 (260)
T ss_dssp             HHHHHHHH
T ss_pred             HHHhHHHH
Confidence            99877754

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.9e-21  Score=150.31  Aligned_cols=142  Identities=14%  Similarity=0.054  Sum_probs=113.4

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      ....+|+++||||+++||++++++|+++|++|++++|++++..+     .....++..+.+|++|++++.++++      
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            34678999999999999999999999999999999998654111     1234578999999999998887664      


Q ss_pred             -CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                       ++|++|||||...          .|+..+++|+.+++.+.+++    .+.+.++||++||.....+.+....|+.||++
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa  162 (244)
T d1yb1a_          83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFA  162 (244)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHH
T ss_pred             CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHHH
Confidence             5899999999642          23567899999999877776    45567799999996555556667889999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+.+..
T Consensus       163 l~~~~~~L  170 (244)
T d1yb1a_         163 AVGFHKTL  170 (244)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            98877653

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.85  E-value=2.9e-21  Score=149.92  Aligned_cols=140  Identities=15%  Similarity=0.134  Sum_probs=111.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++|+++||||+++||+++++.|+++|++|++++|+.++..+      .....++.++.+|++|+++++++++       
T Consensus         3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (251)
T d1vl8a_           3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   82 (251)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999998644211      1224578899999999998887764       


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCC-CCCCcchHHHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGV-ANYLLQGYYEGKRA  185 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~-~~~~~~~Y~~sK~~  185 (198)
                      ++|++|||||...          .|+..+++|+.+++.+.+++.    +.+.+++|+++|..... +.+....|+.+|++
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asKaa  162 (251)
T d1vl8a_          83 KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGG  162 (251)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHHHh
Confidence            6899999999542          345678999999998888764    34566999999854433 45567789999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+.+..
T Consensus       163 l~~lt~~l  170 (251)
T d1vl8a_         163 VASLTKAL  170 (251)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99887754

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.85  E-value=4.4e-21  Score=149.43  Aligned_cols=140  Identities=12%  Similarity=0.056  Sum_probs=112.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-------ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-------~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      .++|+++||||+++||+++++.|+++|++|++.+|+.++...       .....++..+.+|++|+++++++++      
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            468999999999999999999999999999999998643111       1123468889999999999887764      


Q ss_pred             -CCCEEEEccccCC-----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHH
Q 029125          121 -GVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKR  184 (198)
Q Consensus       121 -~~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~  184 (198)
                       ++|++|||||...           .|+..+++|+.+++.+.+++    ++.+.++||++||...-.+.+....|+.+|+
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa  161 (258)
T d1iy8a_          82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKH  161 (258)
T ss_dssp             SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHH
T ss_pred             CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHHH
Confidence             6899999999532           24567899999999888876    3456679999999654556677889999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.+.+.+..
T Consensus       162 al~~lt~~l  170 (258)
T d1iy8a_         162 GVVGLTRNS  170 (258)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999877654

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=4.4e-21  Score=148.11  Aligned_cols=140  Identities=14%  Similarity=0.042  Sum_probs=112.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHHHHHHHhc---CCCEEEEcc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALD---GVTAVISCV  129 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~vi~~a  129 (198)
                      .++|+++||||+++||++++++|+++|++|++++|++++..+ .....++..+.+|++|+++++++++   ++|++||||
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnA   82 (242)
T d1cyda_           3 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA   82 (242)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECC
Confidence            578999999999999999999999999999999998544211 1123578899999999999999887   589999999


Q ss_pred             ccCC----------CCccceehhhHHHHHHHHHHHH-----cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          130 GGFG----------SNSYMYKINGTANINAIRAASE-----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       130 g~~~----------~~~~~~~~n~~~~~~~~~a~~~-----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      |...          .|+..+++|+.+++.+.+++..     ....++|++||.....+.+....|+.+|++.+.+.+..
T Consensus        83 g~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~l  161 (242)
T d1cyda_          83 ALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAM  161 (242)
T ss_dssp             CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             ccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHHHHHHHH
Confidence            9543          2456789999999988886632     23568999999665566677789999999999887754

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.85  E-value=3e-21  Score=149.04  Aligned_cols=139  Identities=14%  Similarity=0.050  Sum_probs=109.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI  126 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi  126 (198)
                      .++|+++||||+++||++++++|+++|++|++++|++++..+....-+..++.+|++|+++++++++       ++|++|
T Consensus         3 L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV   82 (242)
T d1ulsa_           3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVV   82 (242)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence            4689999999999999999999999999999999986542222223467889999999999887764       589999


Q ss_pred             EccccCC----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          127 SCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       127 ~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      ||||...          .|+..+++|+.+++.+.+++.+    .+..+++++||. ...+.+....|+.+|++.+.+.+.
T Consensus        83 nnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~~~~~~~~Y~asKaal~~ltk~  161 (242)
T d1ulsa_          83 HYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYLGNLGQANYAASMAGVVGLTRT  161 (242)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGGCCTTCHHHHHHHHHHHHHHHH
T ss_pred             ECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccc-cccCCCCCcchHHHHHHHHHHHHH
Confidence            9999542          3456789999999988887743    344467777664 344556678999999999988775


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       162 l  162 (242)
T d1ulsa_         162 L  162 (242)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.85  E-value=2e-21  Score=150.85  Aligned_cols=142  Identities=15%  Similarity=0.071  Sum_probs=113.5

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      ...++|+++||||+++||+++++.|+++|++|++.+|+.+....     .....++..+.+|++|++++.++++      
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   85 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH   85 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            34678999999999999999999999999999999997543111     1224578999999999999887765      


Q ss_pred             -CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                       ++|++|||||...          .|+..+++|+.+++.+.+++    ++.+.++||++||...-.+.+....|+.+|++
T Consensus        86 g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaa  165 (251)
T d2c07a1          86 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAG  165 (251)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHH
Confidence             6899999998532          34567889999998888775    44566799999995544555667899999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+.+..
T Consensus       166 l~~ltr~l  173 (251)
T d2c07a1         166 VIGFTKSL  173 (251)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99887754

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.85  E-value=4.5e-21  Score=148.78  Aligned_cols=140  Identities=16%  Similarity=0.192  Sum_probs=111.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      +.++|+++||||+++||+++++.|+++|++|++.+|+.+....    .....++.++.+|++|+++++++++       +
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4678999999999999999999999999999999997543111    1124578999999999998887765       5


Q ss_pred             CCEEEEccccCC----------CCccceehhhHHHHHHHHHHH----HcCCC-EEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVK-RFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~-~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      +|++|||||...          .|+..+++|+.+++.+.+++.    +.+.+ +||++||...-.+.+....|+.+|++.
T Consensus        83 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaal  162 (251)
T d1zk4a1          83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAV  162 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             ceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHHH
Confidence            899999998642          245678999999998888864    33433 899999965445566678999999999


Q ss_pred             HHHHHh
Q 029125          187 ETELLT  192 (198)
Q Consensus       187 e~~l~~  192 (198)
                      +.+.+.
T Consensus       163 ~~lt~~  168 (251)
T d1zk4a1         163 RIMSKS  168 (251)
T ss_dssp             HHHHHH
T ss_pred             hcchHH
Confidence            987764

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.85  E-value=6.2e-21  Score=148.64  Aligned_cols=141  Identities=21%  Similarity=0.101  Sum_probs=113.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      ..++|+++||||+++||+++++.|+++|++|++.+|++++..+     .....++.++.+|++|+++++++++       
T Consensus         5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   84 (259)
T d2ae2a_           5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH   84 (259)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            4678999999999999999999999999999999997544111     1124567889999999988876653       


Q ss_pred             -CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                       .+|++|||||...          .|+..+++|+.+++.+.+++    .+.+.++||++||.....+.+....|+.+|++
T Consensus        85 ~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa  164 (259)
T d2ae2a_          85 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGA  164 (259)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHHHH
Confidence             4899999999542          24567899999999888776    34556799999996555666777899999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+.+..
T Consensus       165 l~~lt~~l  172 (259)
T d2ae2a_         165 MDQLTRCL  172 (259)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99888754

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.9e-21  Score=149.81  Aligned_cols=141  Identities=13%  Similarity=0.121  Sum_probs=111.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      +.++|+++||||+++||+++++.|+++|++|++++|+++.... .....++.++.+|++|+++++++++       ++|+
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   82 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4578999999999999999999999999999999997543211 1123578899999999999887765       5899


Q ss_pred             EEEccccCC-----------CCccceehhhHHHHHHHHHHHHc---CCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          125 VISCVGGFG-----------SNSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       125 vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~~~---~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      +|||||...           .|+..+++|+.+++.+.+++...   +..+||++||.....+.+....|+.+|++.+.+.
T Consensus        83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt  162 (250)
T d1ydea1          83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMT  162 (250)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred             EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccCcchhHHHHhhHHHHH
Confidence            999999532           23556899999999888876321   2369999999554455667789999999999887


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       163 ~~l  165 (250)
T d1ydea1         163 KAL  165 (250)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            754

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=4.5e-21  Score=149.12  Aligned_cols=140  Identities=14%  Similarity=0.148  Sum_probs=112.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++|+++||||+++||++++++|+++|++|++++|+.++..+     .....++.++.+|++|+++++++++       +
T Consensus         9 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~   88 (255)
T d1fmca_           9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999997543111     1224578999999999998887664       6


Q ss_pred             CCEEEEccccCC---------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHH
Q 029125          122 VTAVISCVGGFG---------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAET  188 (198)
Q Consensus       122 ~d~vi~~ag~~~---------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~  188 (198)
                      +|++|||||...         .|+..+++|+.+++.+.+.+    .+.+..+||++||.....+.+....|+.+|++.+.
T Consensus        89 iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~  168 (255)
T d1fmca_          89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASH  168 (255)
T ss_dssp             CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHH
T ss_pred             CCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHHHHHHH
Confidence            899999999542         24566889999999887766    34456689999996555566777899999999998


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +.+..
T Consensus       169 lt~~l  173 (255)
T d1fmca_         169 LVRNM  173 (255)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87754

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.84  E-value=4.7e-21  Score=149.41  Aligned_cols=140  Identities=16%  Similarity=0.098  Sum_probs=111.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      .++|+++||||+++||+++++.|+++|++|++++|+++....     .....++..+.+|++|+++++++++       +
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (260)
T d1zema1           3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   82 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            578999999999999999999999999999999997543111     1224578999999999988887764       6


Q ss_pred             CCEEEEccccCC-----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          122 VTAVISCVGGFG-----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       122 ~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      +|++|||||...           .|+..+++|+.+++.+.+++    .+.+..+||++||...-.+.+....|+.+|++.
T Consensus        83 iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal  162 (260)
T d1zema1          83 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAI  162 (260)
T ss_dssp             CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHH
T ss_pred             CCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHHH
Confidence            899999999542           23456789999999888876    334567999999954444556678999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+.+..
T Consensus       163 ~~ltk~l  169 (260)
T d1zema1         163 IALTETA  169 (260)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9887754

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=7.5e-21  Score=146.96  Aligned_cols=141  Identities=15%  Similarity=0.011  Sum_probs=112.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHHHHHHHhc---CCCEEEEc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALD---GVTAVISC  128 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~vi~~  128 (198)
                      ..++|+++||||+++||+++++.|+++|++|++++|++++... .....++..+.+|++|+++++++++   ++|++|||
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn   83 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence            3578999999999999999999999999999999998544211 1113468899999999999998876   58999999


Q ss_pred             cccCC----------CCccceehhhHHHHHHHHHHHH-----cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          129 VGGFG----------SNSYMYKINGTANINAIRAASE-----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       129 ag~~~----------~~~~~~~~n~~~~~~~~~a~~~-----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ||...          .|+..+++|+.+++.+.+++.+     .+..+||++||.....+.+....|+.+|++.+.+.+..
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~l  163 (244)
T d1pr9a_          84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVM  163 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             cccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHHHHHHHHH
Confidence            98543          3456789999999887776532     34569999999655556666789999999999887754

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.84  E-value=7.8e-21  Score=147.91  Aligned_cols=138  Identities=17%  Similarity=0.093  Sum_probs=111.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      +|+++||||+++||++++++|+++|++|++.+|++++..+     .....++.++.+|++|+++++++++       ++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            5788999999999999999999999999999997543111     1224578999999999999887765       589


Q ss_pred             EEEEccccCC----------CCccceehhhHHHHHHHHHHHH------cCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          124 AVISCVGGFG----------SNSYMYKINGTANINAIRAASE------KGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~------~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      ++|||||...          .|+..+++|+.+++.+.+++..      .+..+||++||.....+.+....|+.+|++.+
T Consensus        82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal~  161 (257)
T d2rhca1          82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV  161 (257)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHHH
Confidence            9999999542          2456789999999999998743      34568999999655556677789999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+.+..
T Consensus       162 ~ltk~l  167 (257)
T d2rhca1         162 GFTKAL  167 (257)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887754

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.84  E-value=1.2e-20  Score=146.77  Aligned_cols=137  Identities=20%  Similarity=0.181  Sum_probs=108.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      |.++||||+++||++++++|+++|++|++.+|++++...     .....++..+.+|++|++++.++++       ++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            567999999999999999999999999999998644111     1224578899999999998887764       6899


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHHH----HcC-CCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKG-VKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~-~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      +|||||...          .|+..+++|+.+++.+.+++.    +.+ ..+|+++||...-.+.+....|+.+|++.+.+
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l  161 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGL  161 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHhh
Confidence            999999542          245678999999998888763    333 45799999865555667778999999999988


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      .+..
T Consensus       162 tk~l  165 (255)
T d1gega_         162 TQTA  165 (255)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7754

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.84  E-value=8.7e-21  Score=147.82  Aligned_cols=142  Identities=15%  Similarity=0.101  Sum_probs=106.4

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      ...++|+++||||+++||+++++.|+++|++|++++|++++..+     .....++..+.+|++|++++.++++      
T Consensus         4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   83 (259)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999999999998643111     1124578999999999988776653      


Q ss_pred             --CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHH
Q 029125          121 --GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKR  184 (198)
Q Consensus       121 --~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~  184 (198)
                        .+|++|||||...          +|+..+++|+.+++.+.+++    ++.+..+||++||.....+.+....|+.+|+
T Consensus        84 ~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  163 (259)
T d1xq1a_          84 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKG  163 (259)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHH
T ss_pred             CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccccccccccc
Confidence              3899999999542          34667899999999888876    4456679999999654455666789999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.+.+.+..
T Consensus       164 al~~lt~~l  172 (259)
T d1xq1a_         164 ALNQLARNL  172 (259)
T ss_dssp             HHHHHHHHH
T ss_pred             chhhhhHHH
Confidence            999887754

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.84  E-value=9.8e-21  Score=151.74  Aligned_cols=139  Identities=17%  Similarity=0.158  Sum_probs=107.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc----cc-------ccCCCCeEEEEccCCCHHHHHHHhc--CC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS----LR-------DSWANNVIWHQGNLLSSDSWKEALD--GV  122 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~----~~-------~~~~~~~~~~~~D~~d~~~~~~~~~--~~  122 (198)
                      +|++||||||||||++|+++|+++||+|++++|..+..    ..       ......+.++.+|+++.+.+...++  ++
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence            47999999999999999999999999999999964320    00       1113457899999999999998875  68


Q ss_pred             CEEEEccccCC------CCccceehhhHHHHHHHHHHHHc-----CCCEEEEeecc-ccCC---------CCCCcchHHH
Q 029125          123 TAVISCVGGFG------SNSYMYKINGTANINAIRAASEK-----GVKRFVYISAA-DFGV---------ANYLLQGYYE  181 (198)
Q Consensus       123 d~vi~~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~-----~~~~~v~~Ss~-~~~~---------~~~~~~~Y~~  181 (198)
                      |+|||+|+...      .+...+..|+.++.+++++++..     ...++++.||. .++.         +..|.+.|+.
T Consensus        81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~  160 (339)
T d1n7ha_          81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAA  160 (339)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHH
T ss_pred             chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcchhhH
Confidence            99999998654      33456789999999999998653     23467777774 3332         2346789999


Q ss_pred             HHHHHHHHHHhhC
Q 029125          182 GKRAAETELLTRY  194 (198)
Q Consensus       182 sK~~~e~~l~~~~  194 (198)
                      +|.++|.++..+.
T Consensus       161 sK~~~E~~~~~~~  173 (339)
T d1n7ha_         161 SKCAAHWYTVNYR  173 (339)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999987764

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.84  E-value=1.3e-20  Score=146.92  Aligned_cols=140  Identities=14%  Similarity=0.087  Sum_probs=111.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++|+++||||+++||++++++|+++|++|++++|+..+..+      .....++..+.+|++|+++++++++       
T Consensus         5 L~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   84 (261)
T d1geea_           5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999999998543211      1224568899999999998887764       


Q ss_pred             CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCC-CEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGV-KRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~-~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                      ++|++|||||...          .|+..+++|+.+++.+.+++    .+.+. .+|+++||.....+.+....|+.+|++
T Consensus        85 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asKaa  164 (261)
T d1geea_          85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGG  164 (261)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCCcc
Confidence            6899999999643          24567899999999887776    33443 368899986545566667899999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+.+..
T Consensus       165 l~~lt~~l  172 (261)
T d1geea_         165 MKLMTETL  172 (261)
T ss_dssp             HHHHHHHH
T ss_pred             chhhHHHH
Confidence            99887754

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.83  E-value=2.1e-20  Score=146.25  Aligned_cols=141  Identities=11%  Similarity=0.104  Sum_probs=109.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc----ccCCCCeEEEEccCCCHHHHHHHhc-------C
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALD-------G  121 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~-------~  121 (198)
                      +.++|+++||||+++||++++++|+++|++|++++|+.++...    ......+.++.+|++|+++++++++       +
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999999999997543111    1123467889999999999888764       6


Q ss_pred             CCEEEEccccCC------------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCC-CCCCcchHHHHHH
Q 029125          122 VTAVISCVGGFG------------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGV-ANYLLQGYYEGKR  184 (198)
Q Consensus       122 ~d~vi~~ag~~~------------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~-~~~~~~~Y~~sK~  184 (198)
                      +|++|||||...            .|+..+++|+.+++.+.+++.    +.+..++|++||..... .......|+++|+
T Consensus        83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKa  162 (268)
T d2bgka1          83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKH  162 (268)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHH
T ss_pred             cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHH
Confidence            899999999532            134567899999998888763    34566999999854333 3333458999999


Q ss_pred             HHHHHHHhh
Q 029125          185 AAETELLTR  193 (198)
Q Consensus       185 ~~e~~l~~~  193 (198)
                      +.+.+.+..
T Consensus       163 al~~lt~~l  171 (268)
T d2bgka1         163 AVLGLTTSL  171 (268)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHhCHHHH
Confidence            999887754

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.83  E-value=9.9e-21  Score=147.02  Aligned_cols=141  Identities=16%  Similarity=0.168  Sum_probs=112.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc--ccccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS--LRDSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~--~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      +.++|+++||||+++||+++++.|+++|++|++.+|+++..  .......+..++.+|++|+++++++++       ++|
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD   82 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            46789999999999999999999999999999999975431  112234678899999999988887764       589


Q ss_pred             EEEEccccCC----------CCccceehhhHHHHHHHHHHHHc---CCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          124 AVISCVGGFG----------SNSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~---~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                      ++|||||...          .|+..+++|+.+++.+.+++...   ...+||++||.....+.+....|+.+|++.+.+.
T Consensus        83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt  162 (253)
T d1hxha_          83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALT  162 (253)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred             eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccccccccchhHHHHHHH
Confidence            9999999542          24567899999999888877432   2369999999655556667789999999999887


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       163 ~~l  165 (253)
T d1hxha_         163 RAA  165 (253)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            643

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.83  E-value=1.1e-20  Score=145.71  Aligned_cols=137  Identities=12%  Similarity=0.033  Sum_probs=108.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCe-------EEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc----
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLT-------VASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD----  120 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~-------V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~----  120 (198)
                      +.|+||||+++||++++++|+++|++       |++.+|+..+...     .....++.++.+|++|+++++++++    
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999987       8888887543111     1123567889999999998887764    


Q ss_pred             ---CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHH
Q 029125          121 ---GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGK  183 (198)
Q Consensus       121 ---~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK  183 (198)
                         ++|++|||||...          .|+..+++|+.+++.+.+++    ++.+.++||++||...-.+.+....|+.+|
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK  161 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSK  161 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHHH
Confidence               5899999999542          34567899999999877776    445667999999965555667778999999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      ++.+.+.+..
T Consensus       162 ~al~~lt~~l  171 (240)
T d2bd0a1         162 FGQRGLVETM  171 (240)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999877653

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.3e-20  Score=144.97  Aligned_cols=138  Identities=12%  Similarity=0.086  Sum_probs=110.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc------ccc-CCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL------RDS-WANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~------~~~-~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .+|+++||||+++||+++++.|+++|++|++++|+.++..      ... ...++.++.+|++|+++++++++       
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999864311      111 13468899999999998887764       


Q ss_pred             CCCEEEEccccC--CCCccceehhhHHHHHHHHHHHH----cC---CCEEEEeeccccCCCCCCcchHHHHHHHHHHHHH
Q 029125          121 GVTAVISCVGGF--GSNSYMYKINGTANINAIRAASE----KG---VKRFVYISAADFGVANYLLQGYYEGKRAAETELL  191 (198)
Q Consensus       121 ~~d~vi~~ag~~--~~~~~~~~~n~~~~~~~~~a~~~----~~---~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~  191 (198)
                      ++|++|||||..  .+|+..+++|+.+++.+.+++..    ..   ..+||++||...-.+.+....|+.+|++.+.+.+
T Consensus        82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltr  161 (254)
T d2gdza1          82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTR  161 (254)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHHHHHHHHHH
Confidence            689999999965  35678899999999877777632    22   2579999996555566677899999999998876


Q ss_pred             h
Q 029125          192 T  192 (198)
Q Consensus       192 ~  192 (198)
                      .
T Consensus       162 s  162 (254)
T d2gdza1         162 S  162 (254)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.83  E-value=1.1e-19  Score=146.51  Aligned_cols=139  Identities=17%  Similarity=0.148  Sum_probs=109.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc----ccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALD--GVTAVISC  128 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~  128 (198)
                      ++|+||||||+||||++|+++|+++|++|++++|+......    .....+++++.+|++|++.+.++++  .+|+|+|+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~   86 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM   86 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence            57999999999999999999999999999999998654322    1124579999999999999999887  57999999


Q ss_pred             cccCC------CCccceehhhHHHHHHHHHHHHcCCC-EEEEeeccc-cC-----------CCCCCcchHHHHHHHHHHH
Q 029125          129 VGGFG------SNSYMYKINGTANINAIRAASEKGVK-RFVYISAAD-FG-----------VANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       129 ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~Ss~~-~~-----------~~~~~~~~Y~~sK~~~e~~  189 (198)
                      ++...      .+...+.+|+.++.++++++.+.+.. .+++.|+.. +.           .+..|..+|+.+|...|..
T Consensus        87 aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~  166 (356)
T d1rkxa_          87 AAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELV  166 (356)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHH
T ss_pred             hccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccchhh
Confidence            98643      33567889999999999999887644 555555533 22           1234567899999999987


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      +..+
T Consensus       167 ~~~~  170 (356)
T d1rkxa_         167 TSSY  170 (356)
T ss_dssp             HHHH
T ss_pred             hhHH
Confidence            7643

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.83  E-value=1.2e-20  Score=145.89  Aligned_cols=137  Identities=15%  Similarity=0.103  Sum_probs=108.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      +.|+||||+++||++++++|+++|++|++.+++..+..+      .....++.++.+|++|+++++++++       ++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            479999999999999999999999999988765432111      1224578899999999998887765       689


Q ss_pred             EEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          124 AVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                      ++|||||...          .|+..+++|+.+++.+.+++    ++.+.++||++||...-.+.+....|+.+|++.+.+
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~l  161 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGF  161 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHHC
Confidence            9999999543          34567899999999887776    445667999999954444556678999999999988


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      .+..
T Consensus       162 tk~l  165 (244)
T d1edoa_         162 SKTA  165 (244)
T ss_dssp             HHHH
T ss_pred             hHHH
Confidence            7754

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.82  E-value=3.3e-20  Score=145.73  Aligned_cols=139  Identities=19%  Similarity=0.197  Sum_probs=110.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc--cccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++|+++||||+++||+++++.|+++|++|++++|++++..  ......++..+.+|++|+++++++++       .+|+
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi   82 (276)
T d1bdba_           3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT   82 (276)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence            57899999999999999999999999999999999864421  12234578999999999988887754       6899


Q ss_pred             EEEccccCC---------------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          125 VISCVGGFG---------------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       125 vi~~ag~~~---------------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                      +|||||...               .|+..+++|+.+++.+.+++.    +.+ .++|+++|.....+.+....|+.+|++
T Consensus        83 lvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~~~Y~asKaa  161 (276)
T d1bdba_          83 LIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKHA  161 (276)
T ss_dssp             EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSCHHHHHHHHH
T ss_pred             ccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCCchHHHHHHH
Confidence            999998532               134568899999998887763    333 689999885544556667889999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+.+..
T Consensus       162 l~~ltr~l  169 (276)
T d1bdba_         162 IVGLVREL  169 (276)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99887753

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.82  E-value=7.8e-20  Score=142.27  Aligned_cols=141  Identities=18%  Similarity=0.089  Sum_probs=113.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      ..++|+++||||+++||++++++|+++|++|++++|++.+...     ......+.++.+|++|.++++++++       
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   82 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD   82 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            4678999999999999999999999999999999998643111     1224567889999999998877653       


Q ss_pred             -CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                       .+|++|||+|...          .|...+++|+.+++.+.+++    .+.+..++|++||.....+.+....|+.+|.+
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a  162 (258)
T d1ae1a_          83 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGA  162 (258)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHHH
Confidence             3799999999643          34567899999998887776    34567799999996655666778899999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+.+..
T Consensus       163 l~~lt~~l  170 (258)
T d1ae1a_         163 INQMTKSL  170 (258)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99887754

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.81  E-value=8.1e-20  Score=143.21  Aligned_cols=141  Identities=14%  Similarity=0.086  Sum_probs=107.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------cc--CCCCeEEEEccCCCHHHHHHHhc----
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DS--WANNVIWHQGNLLSSDSWKEALD----  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~--~~~~~~~~~~D~~d~~~~~~~~~----  120 (198)
                      +.++|+++||||+++||+++++.|+++|++|++.+|+.++..+      ..  ...++..+.+|++|+++++++++    
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999998643111      11  12358899999999998887764    


Q ss_pred             ---CCCEEEEccccCC--------------CCccceehhhHHHHHHHHHHHHc---CCCEEEEeecc-ccCCCCCCcchH
Q 029125          121 ---GVTAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEK---GVKRFVYISAA-DFGVANYLLQGY  179 (198)
Q Consensus       121 ---~~d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~a~~~~---~~~~~v~~Ss~-~~~~~~~~~~~Y  179 (198)
                         ++|++|||||...              .|...+++|+.+++.+.+++...   +...+|+++|. ..-.+.+....|
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y  161 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYY  161 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHH
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchh
Confidence               6899999998542              13445689999999888886432   23466666664 333455667889


Q ss_pred             HHHHHHHHHHHHhh
Q 029125          180 YEGKRAAETELLTR  193 (198)
Q Consensus       180 ~~sK~~~e~~l~~~  193 (198)
                      +.+|++.+.+.+..
T Consensus       162 ~asKaal~~ltk~l  175 (272)
T d1xkqa_         162 AIAKAALDQYTRST  175 (272)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHH
Confidence            99999999887754

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.81  E-value=1.9e-19  Score=139.72  Aligned_cols=140  Identities=16%  Similarity=0.075  Sum_probs=110.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCC-CHHHHHHHhc------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLL-SSDSWKEALD------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~-d~~~~~~~~~------  120 (198)
                      .++|+|+||||+++||.+++++|+++|++|+++.|+.++...      .....++.++.+|++ +.++++++++      
T Consensus         3 l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999887654211      112346889999998 5555665543      


Q ss_pred             -CCCEEEEccccCC--CCccceehhhHHHHHHHHHHHH----c---CCCEEEEeeccccCCCCCCcchHHHHHHHHHHHH
Q 029125          121 -GVTAVISCVGGFG--SNSYMYKINGTANINAIRAASE----K---GVKRFVYISAADFGVANYLLQGYYEGKRAAETEL  190 (198)
Q Consensus       121 -~~d~vi~~ag~~~--~~~~~~~~n~~~~~~~~~a~~~----~---~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l  190 (198)
                       ++|++|||||...  .|+..+++|+.|++++.+++..    .   ...+||++||...-.+.+....|+.+|++...+.
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~~t  162 (254)
T d1sbya1          83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFT  162 (254)
T ss_dssp             SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHHHHHHHHHH
Confidence             6899999999653  5678899999999988887743    1   2458999999654556677789999999999887


Q ss_pred             Hhh
Q 029125          191 LTR  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       163 ~~l  165 (254)
T d1sbya1         163 NSL  165 (254)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            754

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.81  E-value=1.1e-19  Score=142.52  Aligned_cols=140  Identities=11%  Similarity=0.035  Sum_probs=108.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------cc--CCCCeEEEEccCCCHHHHHHHhc-----
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DS--WANNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~--~~~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      .++|+++||||+++||+++++.|+++|++|++.+|+.++..+      ..  ...++..+.+|++|+++++++++     
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999998543111      11  12368899999999998887764     


Q ss_pred             --CCCEEEEccccCC------------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccCCCCCCcchHHHH
Q 029125          121 --GVTAVISCVGGFG------------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEG  182 (198)
Q Consensus       121 --~~d~vi~~ag~~~------------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~s  182 (198)
                        ++|++|||||...            .|+..+++|+.+++.+.+++.    +.+..+++++||...-.+.+....|+.+
T Consensus        82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~as  161 (274)
T d1xhla_          82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACA  161 (274)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHH
T ss_pred             cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehhh
Confidence              5899999998431            234567899999998888774    3455577777775444455667789999


Q ss_pred             HHHHHHHHHhh
Q 029125          183 KRAAETELLTR  193 (198)
Q Consensus       183 K~~~e~~l~~~  193 (198)
                      |++.+.+.+..
T Consensus       162 Kaal~~ltk~l  172 (274)
T d1xhla_         162 KAALDQYTRCT  172 (274)
T ss_dssp             HHHHHHHHHHH
T ss_pred             hhHHHHHHHHH
Confidence            99999887653

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.2e-19  Score=139.65  Aligned_cols=140  Identities=19%  Similarity=0.177  Sum_probs=108.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------cc-CCCCeEEEEccCCCHHHHHHHhc------
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DS-WANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~-~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      .++|+++||||+++||.++++.|+++|++|++.+|+.++...      .. ...++.++.+|++|+++++++++      
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            568999999999999999999999999999999998643111      11 12468889999999998887664      


Q ss_pred             -CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcC--CCEEEEeeccc-c-CCCCCCcchHHH
Q 029125          121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKG--VKRFVYISAAD-F-GVANYLLQGYYE  181 (198)
Q Consensus       121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~--~~~~v~~Ss~~-~-~~~~~~~~~Y~~  181 (198)
                       ++|++|||||...          .|+..+++|+.+.+.+.+++    .+.+  ..+||++||.. + +.+......|+.
T Consensus        88 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~~  167 (257)
T d1xg5a_          88 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSA  167 (257)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHH
T ss_pred             CCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHHH
Confidence             6899999998542          23566889999998877776    3333  46999999944 2 234455677999


Q ss_pred             HHHHHHHHHHhh
Q 029125          182 GKRAAETELLTR  193 (198)
Q Consensus       182 sK~~~e~~l~~~  193 (198)
                      +|++.+.+.+..
T Consensus       168 sKaal~~ltr~l  179 (257)
T d1xg5a_         168 TKYAVTALTEGL  179 (257)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHhCHHHH
Confidence            999999887643

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.80  E-value=1.5e-19  Score=141.11  Aligned_cols=140  Identities=16%  Similarity=0.075  Sum_probs=106.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------c--cCCCCeEEEEccCCCHHHHHHHhc-----
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------D--SWANNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~--~~~~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      .++|+++||||+++||++++++|+++|++|++++|+.++..+      .  ....++.++.+|++|+++++++++     
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999998543111      1  112358999999999998887765     


Q ss_pred             --CCCEEEEccccCC--------------CCccceehhhHHHHHHHHHHHHc---CCCEEEEeeccccC-CCCCCcchHH
Q 029125          121 --GVTAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEK---GVKRFVYISAADFG-VANYLLQGYY  180 (198)
Q Consensus       121 --~~d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~a~~~~---~~~~~v~~Ss~~~~-~~~~~~~~Y~  180 (198)
                        ++|++|||||...              .|+..+++|+.+++.+.+++...   +..++|+++|...+ .+.+....|+
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~~~Y~  162 (264)
T d1spxa_          83 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYS  162 (264)
T ss_dssp             HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSHHHH
T ss_pred             hCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCCchhhh
Confidence              6899999998531              24556889999999888887431   23467777764333 4555667899


Q ss_pred             HHHHHHHHHHHhh
Q 029125          181 EGKRAAETELLTR  193 (198)
Q Consensus       181 ~sK~~~e~~l~~~  193 (198)
                      .+|++.+.+.+..
T Consensus       163 asKaal~~lt~~l  175 (264)
T d1spxa_         163 IAKAAIDQYTRNT  175 (264)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             hhhhhHHHHHHHH
Confidence            9999999887754

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.80  E-value=3.6e-19  Score=137.58  Aligned_cols=139  Identities=14%  Similarity=0.118  Sum_probs=105.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHH---CCCeEEEeecCCCCccc----ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           55 PSEKLLVLGGNGFVGSHICREALD---RGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~---~g~~V~~l~r~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .||+|+||||+++||.+++++|++   +|++|++.+|++++...    .....++.++.+|++|+++++++++       
T Consensus         1 ~MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   80 (248)
T d1snya_           1 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK   80 (248)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhh
Confidence            378999999999999999999974   68999999998765321    1124689999999999888776543       


Q ss_pred             --CCCEEEEccccCCC-----------CccceehhhHHHHHHHHHHHH---------------cCCCEEEEeecccc---
Q 029125          121 --GVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASE---------------KGVKRFVYISAADF---  169 (198)
Q Consensus       121 --~~d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~~---------------~~~~~~v~~Ss~~~---  169 (198)
                        ++|++|||||....           ++..+++|+.+++.+.+++..               .+..++|+++|...   
T Consensus        81 ~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~  160 (248)
T d1snya_          81 DQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ  160 (248)
T ss_dssp             GGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred             cCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC
Confidence              48999999995321           234678999999988777622               13568999999432   


Q ss_pred             CCCCCCcchHHHHHHHHHHHHHhh
Q 029125          170 GVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       170 ~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      +.+.+....|+.||++...+.+..
T Consensus       161 ~~~~~~~~~Y~aSKaal~~lt~~l  184 (248)
T d1snya_         161 GNTDGGMYAYRTSKSALNAATKSL  184 (248)
T ss_dssp             TCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHH
Confidence            233445668999999999877653

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.80  E-value=3.5e-19  Score=136.65  Aligned_cols=136  Identities=18%  Similarity=0.070  Sum_probs=108.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCC-HHHHHHHhcCCCEEEEccccC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLS-SDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      .++|+++||||+++||+++++.|+++|++|++++|+++...    ..+.+++.+|+++ .+.+.+.+.++|++|||||..
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~----~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~   77 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGP   77 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH----hcCCcEEEcchHHHHHHHHHHhCCCcEEEeccccc
Confidence            36799999999999999999999999999999999754321    2345788899986 355556677899999999853


Q ss_pred             C----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          133 G----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       133 ~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      .          .|+..+++|+.+++.+.+++    ++.+..++|+++|.....+.+....|+.+|++.+.+.+..
T Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~l  152 (234)
T d1o5ia_          78 KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTL  152 (234)
T ss_dssp             CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             CCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHHHHHHH
Confidence            2          24556789999998777776    4456679999999766667777889999999999877654

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=5.1e-19  Score=140.23  Aligned_cols=141  Identities=16%  Similarity=0.066  Sum_probs=110.4

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc----------ccCCCCeEEEEccCCCHHHHHHHhc-
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----------DSWANNVIWHQGNLLSSDSWKEALD-  120 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----------~~~~~~~~~~~~D~~d~~~~~~~~~-  120 (198)
                      ...++|+++||||+++||+++++.|+++|++|++.+|+.++...          .....++..+.+|++|++++.++++ 
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            45789999999999999999999999999999999998543110          1123578899999999998887764 


Q ss_pred             ------CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH----cCCCEEEEeeccccCCCCCCcchHH
Q 029125          121 ------GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYY  180 (198)
Q Consensus       121 ------~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~Y~  180 (198)
                            ++|++|||||...          .|+..+++|+.+++.+.+++..    .+..++|++|+.. ....+....|+
T Consensus        88 ~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~-~~~~~~~~~Y~  166 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVHSG  166 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHHHH
T ss_pred             HHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccc-cccccccccch
Confidence                  6899999998532          3456789999999988888743    3455788887643 33455667899


Q ss_pred             HHHHHHHHHHHhh
Q 029125          181 EGKRAAETELLTR  193 (198)
Q Consensus       181 ~sK~~~e~~l~~~  193 (198)
                      .+|++.+.+.+..
T Consensus       167 asKaal~~ltk~l  179 (297)
T d1yxma1         167 AARAGVYNLTKSL  179 (297)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHH
Confidence            9999999887754

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.80  E-value=2.1e-19  Score=135.44  Aligned_cols=129  Identities=16%  Similarity=0.222  Sum_probs=98.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHh-cCCCEEEEcccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL-DGVTAVISCVGG  131 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~d~vi~~ag~  131 (198)
                      ++|+|+|||||||||++|+++|+++|+  +|+++.|++...     ...+   ..+..|..++...+ ..+|+|||++|.
T Consensus         1 t~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-----~~~~---~~~~~d~~~~~~~~~~~~d~vi~~~g~   72 (212)
T d2a35a1           1 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-----HPRL---DNPVGPLAELLPQLDGSIDTAFCCLGT   72 (212)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-----CTTE---ECCBSCHHHHGGGCCSCCSEEEECCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-----cccc---cccccchhhhhhccccchheeeeeeee
Confidence            358999999999999999999999997  778887765332     1223   33444544444433 458999999985


Q ss_pred             CC----CCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          132 FG----SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       132 ~~----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ..    .......+|+.++.+++++|++.++++|+++||..  ....+.+.|..+|+.+|+.+++.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~--~~~~~~~~y~~~K~~~E~~l~~~  136 (212)
T d2a35a1          73 TIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALG--ADAKSSIFYNRVKGELEQALQEQ  136 (212)
T ss_dssp             CHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTT--CCTTCSSHHHHHHHHHHHHHTTS
T ss_pred             eccccccccccccchhhhhhhcccccccccccccccccccc--cccccccchhHHHHHHhhhcccc
Confidence            42    33456789999999999999999999999999953  33445578999999999998765

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.79  E-value=1.1e-19  Score=140.02  Aligned_cols=139  Identities=16%  Similarity=0.131  Sum_probs=108.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc--cccCCCCeEEEEccCCCHHHHHHHhc-------CCCE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALD-------GVTA  124 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~  124 (198)
                      .++|+++||||+++||+++++.|+++|++|++.+|+.++..  ......++.++++|++|+++++++++       ++|+
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi   82 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   82 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            57899999999999999999999999999999999865421  12334678899999999999887665       5899


Q ss_pred             EEEccccCC----------CCccceehhhHHHHHHHHHHHHcC--CCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          125 VISCVGGFG----------SNSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~~--~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      +|||||...          .|+..+++|+.+.+.+.+++....  .+.++++|+. .....+....|+.+|++.|.+.+.
T Consensus        83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~-a~~~~~~~~~Y~~sK~al~~lt~~  161 (241)
T d2a4ka1          83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSV-AGLGAFGLAHYAAGKLGVVGLART  161 (241)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCC-TTCCHHHHHHHHHCSSHHHHHHHH
T ss_pred             eccccccccccchhhhhccccccccccccccccccccccccccccccceeecccc-ccccccCccccchhhHHHHHHHHH
Confidence            999998532          245678999999999999886542  3345555543 334445677899999999988775


Q ss_pred             h
Q 029125          193 R  193 (198)
Q Consensus       193 ~  193 (198)
                      .
T Consensus       162 l  162 (241)
T d2a4ka1         162 L  162 (241)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=6.3e-19  Score=136.08  Aligned_cols=141  Identities=8%  Similarity=-0.032  Sum_probs=111.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHh---cCCCEEEEcc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL---DGVTAVISCV  129 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~---~~~d~vi~~a  129 (198)
                      +.++|+++||||+++||+++++.|+++|++|++.+|++++..+.....++....+|+.+.+.++...   .++|++|||+
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~a   82 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVA   82 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEecc
Confidence            3678999999999999999999999999999999998654333223457889999999887776654   3789999999


Q ss_pred             ccCC----------CCccceehhhHHHHHHHHHHH----HcCCCEEEEeeccccC-CCCCCcchHHHHHHHHHHHHHhh
Q 029125          130 GGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFG-VANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       130 g~~~----------~~~~~~~~n~~~~~~~~~a~~----~~~~~~~v~~Ss~~~~-~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      |...          .|+..+++|+.+++.+.+++.    +.+..+||++||.... .+.+....|+.+|++.+.+++..
T Consensus        83 g~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~l~r~l  161 (245)
T d2ag5a1          83 GFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSV  161 (245)
T ss_dssp             CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHHHHHHHHH
Confidence            9543          245668999999998887764    3456699999985433 34566788999999999988764

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.79  E-value=2.7e-19  Score=142.15  Aligned_cols=141  Identities=16%  Similarity=0.090  Sum_probs=107.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-----------ccCCCCeEEEEccCCCHHHHHHHhc-
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----------DSWANNVIWHQGNLLSSDSWKEALD-  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-----------~~~~~~~~~~~~D~~d~~~~~~~~~-  120 (198)
                      ..++|+++||||+++||+++++.|+++|++|++.+|+.+....           .........+.+|+.|.++++++++ 
T Consensus         4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~   83 (302)
T d1gz6a_           4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKT   83 (302)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHH
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHH
Confidence            4578999999999999999999999999999999887543110           0011233556778888766655443 


Q ss_pred             ------CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHH
Q 029125          121 ------GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYY  180 (198)
Q Consensus       121 ------~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~  180 (198)
                            ++|++|||||...          .|+..+++|+.+++.+.+++    ++.+.++||++||...-.+.+....|+
T Consensus        84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~~Y~  163 (302)
T d1gz6a_          84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYS  163 (302)
T ss_dssp             HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcHHHH
Confidence                  6999999999643          34567899999999888876    445667999999954334556678999


Q ss_pred             HHHHHHHHHHHhh
Q 029125          181 EGKRAAETELLTR  193 (198)
Q Consensus       181 ~sK~~~e~~l~~~  193 (198)
                      ++|++.+.+.+..
T Consensus       164 asKaal~~lt~~l  176 (302)
T d1gz6a_         164 AAKLGLLGLANTL  176 (302)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999887754

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.78  E-value=6.5e-19  Score=137.09  Aligned_cols=141  Identities=18%  Similarity=0.210  Sum_probs=107.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      ..++|+++||||+++||+++++.|+++|++|++++|+..+..+      .....++..+.+|++|++++.++++      
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   85 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999998765221      1224578999999999999887764      


Q ss_pred             -CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHH-----cCCCEEEEeeccccCC-------CCCCcc
Q 029125          121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE-----KGVKRFVYISAADFGV-------ANYLLQ  177 (198)
Q Consensus       121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~-----~~~~~~v~~Ss~~~~~-------~~~~~~  177 (198)
                       ++|++|||||...          .|+..+++|+.+++.+.+++..     ....+++..++.....       +.+...
T Consensus        86 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~  165 (260)
T d1h5qa_          86 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQV  165 (260)
T ss_dssp             CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCH
T ss_pred             CCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCcccc
Confidence             5899999998542          2456789999999888777632     2344666666633211       223457


Q ss_pred             hHHHHHHHHHHHHHhh
Q 029125          178 GYYEGKRAAETELLTR  193 (198)
Q Consensus       178 ~Y~~sK~~~e~~l~~~  193 (198)
                      .|+.+|++.+.+.+..
T Consensus       166 ~Y~asKaal~~lt~~l  181 (260)
T d1h5qa_         166 FYNSSKAACSNLVKGL  181 (260)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             chhhhhhhHHHHHHHH
Confidence            8999999999887654

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=6.7e-19  Score=138.79  Aligned_cols=138  Identities=14%  Similarity=0.062  Sum_probs=106.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEee---cCCCCccc--------ccCCCCeEEEEccCCCHHHHHHHhc----
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLS---RSGRSSLR--------DSWANNVIWHQGNLLSSDSWKEALD----  120 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~---r~~~~~~~--------~~~~~~~~~~~~D~~d~~~~~~~~~----  120 (198)
                      +|.|+||||+++||++++++|+++|++|+.+.   |+......        .....++..+.+|++|++++.++++    
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            46789999999999999999999998765554   33222110        1124578999999999999998775    


Q ss_pred             -CCCEEEEccccCC----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHH
Q 029125          121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRA  185 (198)
Q Consensus       121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~  185 (198)
                       .+|++|||+|...          .|+..+++|+.|++++.+++    ++.+.++||++||...-.+.+....|+++|++
T Consensus        82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asKaa  161 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFA  161 (285)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred             cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHHHH
Confidence             4799999998532          23556899999999887776    45667799999996555566777899999999


Q ss_pred             HHHHHHhh
Q 029125          186 AETELLTR  193 (198)
Q Consensus       186 ~e~~l~~~  193 (198)
                      .+.+.+..
T Consensus       162 l~~l~~~l  169 (285)
T d1jtva_         162 LEGLCESL  169 (285)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99877653

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.78  E-value=3.7e-19  Score=138.45  Aligned_cols=141  Identities=16%  Similarity=0.072  Sum_probs=108.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      ++.+|+++||||+++||.++++.|+++|++|++..++..+..+      .....++..+.+|++|+++++++++      
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            5688999999999999999999999999999988776443211      1234578999999999998887765      


Q ss_pred             -CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHHcC--CCEEEEeecccc-CCCCCCcchHHHHHHHH
Q 029125          121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEKG--VKRFVYISAADF-GVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~~--~~~~v~~Ss~~~-~~~~~~~~~Y~~sK~~~  186 (198)
                       ++|++|||||...          .|+..+++|+.+.+.+++++...-  -+++++++|... ..+.+....|+.+|++.
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~~~Y~asK~al  162 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAV  162 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHHHHH
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCchhHHHHHHHH
Confidence             5899999999643          234568999999999998886532  236766666332 22455677899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+++..
T Consensus       163 ~~l~r~l  169 (259)
T d1ja9a_         163 EGFCRAF  169 (259)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9887754

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.78  E-value=6.9e-19  Score=136.64  Aligned_cols=139  Identities=22%  Similarity=0.248  Sum_probs=110.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccc--------ccCCCCeEEEEccCCCHHHHHHHhc-----
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR--------DSWANNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~--------~~~~~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      +.++++||||+|+||++++++|+++|+ +|+++.|+..+...        .....++.++.+|++|.+++.++++     
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence            346999999999999999999999998 58888886432111        1123568999999999999998876     


Q ss_pred             -CCCEEEEccccCCC----------CccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHH
Q 029125          121 -GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETE  189 (198)
Q Consensus       121 -~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~  189 (198)
                       ++|.||||+|....          +...+.+|+.+..++.+++...+.++||++||...-.+.+....|+++|.+.+.+
T Consensus        88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~~~YaAaka~l~~l  167 (259)
T d2fr1a1          88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGL  167 (259)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcccHHHHHHHHhHHHH
Confidence             36899999996432          2345789999999999988888888999999954444556677899999999988


Q ss_pred             HHhh
Q 029125          190 LLTR  193 (198)
Q Consensus       190 l~~~  193 (198)
                      .++.
T Consensus       168 a~~~  171 (259)
T d2fr1a1         168 AQQR  171 (259)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7765

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.78  E-value=6.2e-19  Score=136.81  Aligned_cols=141  Identities=12%  Similarity=0.057  Sum_probs=109.3

Q ss_pred             CCCCCeEEEEcCCc--hhHHHHHHHHHHCCCeEEEeecCCCCccc----ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           53 PPPSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG--~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      ..++|+++||||+|  +||++++++|+++|++|++.+|++.....    ........++.+|++|+++++++++      
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF   84 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc
Confidence            35789999999987  89999999999999999998887543111    1123467889999999998887764      


Q ss_pred             -CCCEEEEccccCC--------------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHH
Q 029125          121 -GVTAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGK  183 (198)
Q Consensus       121 -~~d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK  183 (198)
                       ++|++|||||...              +|...+++|+.+.+.+.+++...  .-++||++||.....+.+....|+.+|
T Consensus        85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK  164 (256)
T d1ulua_          85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAK  164 (256)
T ss_dssp             SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred             CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCchHHHHHH
Confidence             5899999998532              12345789999999888887543  135899999966556667778999999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      ++.+.+.+..
T Consensus       165 aal~~ltr~l  174 (256)
T d1ulua_         165 AALEASVRYL  174 (256)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999887754

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.78  E-value=1.2e-18  Score=136.28  Aligned_cols=141  Identities=17%  Similarity=0.095  Sum_probs=110.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      ..++|+++||||+++||+++++.|+++|++|++++|+..+..+      ......+.++.+|++|++++.++++      
T Consensus        15 sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   94 (272)
T d1g0oa_          15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF   94 (272)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999987543211      1234578999999999988887765      


Q ss_pred             -CCCEEEEccccCC----------CCccceehhhHHHHHHHHHHHHcC--CCEEEEeecc-ccCCCCCCcchHHHHHHHH
Q 029125          121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEKG--VKRFVYISAA-DFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~~--~~~~v~~Ss~-~~~~~~~~~~~Y~~sK~~~  186 (198)
                       ++|++|||+|...          .|...+++|+.+++.+.+++...-  -+++++++|. ....+.+....|+.+|++.
T Consensus        95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~~~~Y~asKaal  174 (272)
T d1g0oa_          95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAI  174 (272)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHHHH
T ss_pred             CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccchhhHHHHHHHH
Confidence             6899999998542          234567899999999999986532  3478888774 3334556667899999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+.+..
T Consensus       175 ~~ltk~l  181 (272)
T d1g0oa_         175 ETFARCM  181 (272)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9888753

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.77  E-value=1.1e-18  Score=136.58  Aligned_cols=125  Identities=22%  Similarity=0.232  Sum_probs=96.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEccccCC-
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFG-  133 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~~-  133 (198)
                      |+|||||||||||++|++.|.++|+. +.++++...            +.+|++|.+.+.++++  ++|+|||+||... 
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~-v~~~~~~~~------------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~   67 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNL-IALDVHSKE------------FCGDFSNPKGVAETVRKLRPDVIVNAAAHTAV   67 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEE-EEECTTCSS------------SCCCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCE-EEEECCCcc------------ccCcCCCHHHHHHHHHHcCCCEEEEecccccc
Confidence            57999999999999999999999864 445544322            2469999999999887  5799999998543 


Q ss_pred             -----CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCC----------CCCCcchHHHHHHHHHHHHHhhCC
Q 029125          134 -----SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGV----------ANYLLQGYYEGKRAAETELLTRYP  195 (198)
Q Consensus       134 -----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~----------~~~~~~~Y~~sK~~~e~~l~~~~~  195 (198)
                           .+...+..|+.++.++++++++.+. +++++|| ..|+.          +..|.+.|+.+|..+|.+++.+..
T Consensus        68 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~~~  144 (298)
T d1n2sa_          68 DKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCP  144 (298)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCS
T ss_pred             cccccCccccccccccccccchhhhhcccc-ccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHhhhc
Confidence                 2345678999999999999988876 5777776 44332          234567899999999999987654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.75  E-value=2e-18  Score=132.29  Aligned_cols=133  Identities=23%  Similarity=0.218  Sum_probs=99.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHH-------Hh--cCCCEEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE-------AL--DGVTAVI  126 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-------~~--~~~d~vi  126 (198)
                      ..+|+||||+++||++++++|+++|++|++++|++.+..     .....+.+|+.+.+....       .+  .++|++|
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~li   76 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVF   76 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-----cccceeccccCchhHHHHHHHHHHHHhcCCCeeEEE
Confidence            357999999999999999999999999999999865432     223445566665443332       22  2489999


Q ss_pred             EccccCC-----------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          127 SCVGGFG-----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       127 ~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ||||...           .|+..+++|+.+++.+.+++...  .-.+|+++||.....+.+...+|+.+|++.+.+.+..
T Consensus        77 nnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~l  156 (235)
T d1ooea_          77 CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSL  156 (235)
T ss_dssp             ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             ECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccccchHHHHHHHHHHHHHH
Confidence            9999532           12345789999999888888553  2358999999655556667889999999999998865

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.75  E-value=3e-18  Score=133.13  Aligned_cols=141  Identities=14%  Similarity=0.045  Sum_probs=109.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHH---CCCeEEEeecCCCCccc------cc-CCCCeEEEEccCCCHHHHHHHhc--
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALD---RGLTVASLSRSGRSSLR------DS-WANNVIWHQGNLLSSDSWKEALD--  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~---~g~~V~~l~r~~~~~~~------~~-~~~~~~~~~~D~~d~~~~~~~~~--  120 (198)
                      ..++|.++||||+++||++++++|++   +|++|++++|+.++...      .. ...++.++.+|++|+++++++++  
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            35688999999999999999999986   79999999998653111      11 12368899999999998887753  


Q ss_pred             ---------CCCEEEEccccCC-------------CCccceehhhHHHHHHHHHHHHc----C--CCEEEEeeccccCCC
Q 029125          121 ---------GVTAVISCVGGFG-------------SNSYMYKINGTANINAIRAASEK----G--VKRFVYISAADFGVA  172 (198)
Q Consensus       121 ---------~~d~vi~~ag~~~-------------~~~~~~~~n~~~~~~~~~a~~~~----~--~~~~v~~Ss~~~~~~  172 (198)
                               .+|++|||+|...             .|+..+++|+.+++.+.+++...    +  ..+||++||...-.+
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~  162 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence                     3579999998532             13456789999999999988553    2  248999999655556


Q ss_pred             CCCcchHHHHHHHHHHHHHhh
Q 029125          173 NYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       173 ~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      .+....|+.+|++.+.+.+..
T Consensus       163 ~~~~~~Y~asKaal~~lt~~l  183 (259)
T d1oaaa_         163 YKGWGLYCAGKAARDMLYQVL  183 (259)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHH
T ss_pred             CccchHHHHHHHHHHHHHHHH
Confidence            667889999999999887754

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.75  E-value=3.9e-18  Score=130.81  Aligned_cols=135  Identities=18%  Similarity=0.150  Sum_probs=101.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHH-------hc--CCCEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-------LD--GVTAV  125 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-------~~--~~d~v  125 (198)
                      ++|+|+||||+|+||+++++.|+++|++|+++++......     .....+.+|..+.++.+.+       +.  ++|++
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~l   75 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   75 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHHHhCCCCceEE
Confidence            4789999999999999999999999999999998755422     2234455566555444332       22  48999


Q ss_pred             EEccccCC-----------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          126 ISCVGGFG-----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       126 i~~ag~~~-----------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      |||||...           .|+..+++|+.+++++.+++...  .-++||++||...-.+.+....|+.||++.+.+.+.
T Consensus        76 InnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~  155 (236)
T d1dhra_          76 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQS  155 (236)
T ss_dssp             EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHH
T ss_pred             EECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCCcccHHHHHHHHHHHHH
Confidence            99998432           13456789999999888888653  235899999965555666778999999999999887


Q ss_pred             hC
Q 029125          193 RY  194 (198)
Q Consensus       193 ~~  194 (198)
                      ..
T Consensus       156 la  157 (236)
T d1dhra_         156 LA  157 (236)
T ss_dssp             HT
T ss_pred             HH
Confidence            63

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.75  E-value=8.2e-18  Score=129.98  Aligned_cols=138  Identities=15%  Similarity=0.097  Sum_probs=102.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc---------CC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD---------GV  122 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~---------~~  122 (198)
                      +|+|+||||+++||.+++++|+++|+  +|++.+|+.++..+  .....++.++.+|++|.++++++++         ++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            58999999999999999999999995  68888888654222  2334679999999999988876653         38


Q ss_pred             CEEEEccccCCC-----------CccceehhhHHHHHHHHHHHH----c-----------CCCEEEEeecccc-------
Q 029125          123 TAVISCVGGFGS-----------NSYMYKINGTANINAIRAASE----K-----------GVKRFVYISAADF-------  169 (198)
Q Consensus       123 d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~a~~~----~-----------~~~~~v~~Ss~~~-------  169 (198)
                      |++|||||....           ++..+++|+.|++.+.+++..    .           ...+++.+|+...       
T Consensus        83 dilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~  162 (250)
T d1yo6a1          83 SLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS  162 (250)
T ss_dssp             CEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCS
T ss_pred             EEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCcc
Confidence            999999996421           245689999999988777631    1           1247888877321       


Q ss_pred             CCCCCCcchHHHHHHHHHHHHHhh
Q 029125          170 GVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       170 ~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      +....+...|+.||++...+.+..
T Consensus       163 ~~~~~~~~aY~aSKaal~~l~~~l  186 (250)
T d1yo6a1         163 GSAQFPVLAYRMSKAAINMFGRTL  186 (250)
T ss_dssp             TTSSSCBHHHHHHHHHHHHHHHHH
T ss_pred             cccchhHHHHHHHHHHHHHHHHHH
Confidence            123344557999999999877654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.75  E-value=4.9e-18  Score=128.61  Aligned_cols=137  Identities=20%  Similarity=0.229  Sum_probs=104.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCe--EEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLT--VASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~--V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      .|++||||||||+||++++++|+++|++  |+++.|++.+.  .....+++++.+|++|.+.+.++++++|+|||+++..
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~   79 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK--EKIGGEADVFIGDITDADSINPAFQGIDALVILTSAV   79 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHH--HHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHH--HhccCCcEEEEeeeccccccccccccceeeEEEEeec
Confidence            4789999999999999999999999965  66677765432  2234678999999999999999999999999999853


Q ss_pred             C-------------------CCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCCCCC-----cchHHHHHHHHHH
Q 029125          133 G-------------------SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYL-----LQGYYEGKRAAET  188 (198)
Q Consensus       133 ~-------------------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~~~~-----~~~Y~~sK~~~e~  188 (198)
                      .                   .+.....+|+.++.+++..+.....+.+.+.|+.....+..+     ...|...+...+.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
T d2q46a1          80 PKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQ  159 (252)
T ss_dssp             CEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHH
T ss_pred             cccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcccccccccchhhhhhhhhh
Confidence            2                   122335678899999999999889999999988543333222     3456666666666


Q ss_pred             HHHhh
Q 029125          189 ELLTR  193 (198)
Q Consensus       189 ~l~~~  193 (198)
                      +..+.
T Consensus       160 ~~~~~  164 (252)
T d2q46a1         160 YLADS  164 (252)
T ss_dssp             HHHHS
T ss_pred             hhhcc
Confidence            65543

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=5.6e-18  Score=132.35  Aligned_cols=140  Identities=16%  Similarity=0.096  Sum_probs=108.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHh-------c
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEAL-------D  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~-------~  120 (198)
                      .++|+++||||+++||++++++|+++|++|++++|+.++...      ......+..+.+|+.+.+.+...+       .
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            678999999999999999999999999999999998654111      122456788899999877666544       3


Q ss_pred             CCCEEEEccccCCC----------CccceehhhHHHHHHHHHHHH---cCCCEEEEeeccccCCCCCCcchHHHHHHHHH
Q 029125          121 GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKRAAE  187 (198)
Q Consensus       121 ~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~~---~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e  187 (198)
                      .+|++++|+|....          +...+++|+.++..+.+.+..   .+.+++|++||.....+.+....|+.||++.+
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~~~Y~asKaal~  171 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALD  171 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCchHHHHHHHHHH
Confidence            68999999985421          234578999999877777632   23468999999665566677789999999999


Q ss_pred             HHHHhh
Q 029125          188 TELLTR  193 (198)
Q Consensus       188 ~~l~~~  193 (198)
                      .+.+..
T Consensus       172 ~~~~~L  177 (269)
T d1xu9a_         172 GFFSSI  177 (269)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            877654

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.74  E-value=7.8e-18  Score=132.92  Aligned_cols=142  Identities=13%  Similarity=-0.000  Sum_probs=105.2

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccCCCCeEEEEccCCCHHHHHHHhc-----
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-----  120 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~-----  120 (198)
                      ...++|+++||||+|+||++++++|+++|++|++++|+..+...      ......+.++.+|++|.+++.++++     
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            35678999999999999999999999999999999998643111      1224578899999999998877654     


Q ss_pred             --CCCEEEEccccCCC----------CccceehhhHHHHHHHHHHH-----HcCCCEEEEeeccccCCCCCCcchHHHHH
Q 029125          121 --GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS-----EKGVKRFVYISAADFGVANYLLQGYYEGK  183 (198)
Q Consensus       121 --~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~a~~-----~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK  183 (198)
                        ++|++|||+|....          +...+.+|......+...+.     ..+...++.+++.....+.+...+|+.+|
T Consensus       101 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~YsasK  180 (294)
T d1w6ua_         101 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAK  180 (294)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             ccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHHH
Confidence              68999999996432          23345677777665554432     22344667777654445556677899999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      .+.+.+.+..
T Consensus       181 aal~~ltk~l  190 (294)
T d1w6ua_         181 AGVEAMSKSL  190 (294)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999888754

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.3e-18  Score=134.94  Aligned_cols=111  Identities=19%  Similarity=0.107  Sum_probs=87.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHC-CCeEEEeecCCCCccc-----ccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      +.++||||+++||.+++++|+++ |++|++.+|+.++..+     .....++.++.+|++|.++++++++       ++|
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            34489999999999999999986 8999999998654211     1224578999999999998887654       589


Q ss_pred             EEEEccccCC----------CCccceehhhHHHHHHHHHHHHc--CCCEEEEeecc
Q 029125          124 AVISCVGGFG----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAA  167 (198)
Q Consensus       124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~  167 (198)
                      ++|||||...          .++..+++|+.|++.+.+.+...  .-+++|++||.
T Consensus        84 iLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~  139 (275)
T d1wmaa1          84 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI  139 (275)
T ss_dssp             EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             EEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence            9999999643          12346789999999999998653  23589999983

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.73  E-value=5.4e-19  Score=137.00  Aligned_cols=135  Identities=16%  Similarity=-0.003  Sum_probs=100.8

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-------CCCEEEEccc
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVISCVG  130 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~ag  130 (198)
                      +++||||+++||+++++.|+++|++|++.+|+.+...+. ......++.+|++|.++++++++       ++|++|||||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~-~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg   80 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL-EAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   80 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHH-HHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            689999999999999999999999999999975542211 01112344678877666555443       6999999998


Q ss_pred             cCC-----------CCccceehhhHHHHHHHHHH----HHcCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          131 GFG-----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       131 ~~~-----------~~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ...           +|+..+++|+.+++.+.+++    ++.+..+||++||...-.+.+....|+.+|++.+.+.+..
T Consensus        81 ~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~l  158 (252)
T d1zmta1          81 FAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANAL  158 (252)
T ss_dssp             CCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHHHHH
Confidence            532           23456789999998888776    4456679999999654455566788999999999887754

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.73  E-value=3.6e-17  Score=131.64  Aligned_cols=134  Identities=16%  Similarity=0.083  Sum_probs=106.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCH-HHHHHHhcCCCEEEEcccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSS-DSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~-~~~~~~~~~~d~vi~~ag~  131 (198)
                      ++|+|+||||||+||++|+++|+++|++|+++.|+......  .....+++++.+|+.|. +.+..++.++|+++++...
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~   81 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS   81 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeeccc
Confidence            57899999999999999999999999999999998765322  12246899999999985 4577889999999987653


Q ss_pred             CCCCccceehhhHHHHHHHHHHHHcCCCEEEEeecccc--CCCCCCcchHHHHHHHHHHHHHhhC
Q 029125          132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADF--GVANYLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       132 ~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~--~~~~~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                      .      ...++..+.++++++.+.+++++++.||...  .....+..+|..+|...|.++++..
T Consensus        82 ~------~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~  140 (350)
T d1xgka_          82 Q------AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLG  140 (350)
T ss_dssp             T------TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHTSS
T ss_pred             c------cchhhhhhhHHHHHHHHhCCCceEEEeeccccccCCcccchhhhhhHHHHHHHHHhhc
Confidence            2      2356777889999999999888888888432  2344556788899999999888753

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.72  E-value=3.9e-17  Score=128.34  Aligned_cols=134  Identities=19%  Similarity=0.151  Sum_probs=105.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-------ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-------~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      +++|||||||||+||++|+++|+++|++|++++|+......       .....+++++.+|+.|.+.+.+++++.+++|+
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~   81 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS   81 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence            46789999999999999999999999999999997654211       11246799999999999999999999999999


Q ss_pred             ccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeeccc-cC----CCCCCcchHHHHHHHHHHHHHhh
Q 029125          128 CVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAAD-FG----VANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       128 ~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~-~~----~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      +++..     ....|..+..++++++.+.+..++++.||.. +.    .+..+...|...|..++.++++.
T Consensus        82 ~~~~~-----~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (312)
T d1qyda_          82 ALAGG-----VLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAA  147 (312)
T ss_dssp             CCCCS-----SSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHT
T ss_pred             hhhhc-----ccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhhhhHHHHHHHHhhccc
Confidence            98753     2345677778889999888777777787742 22    23445567888888888877765

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=4e-17  Score=125.83  Aligned_cols=141  Identities=14%  Similarity=0.143  Sum_probs=109.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCCCCeEEEEccCCCHHHHHHHhc-------CCC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVT  123 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d  123 (198)
                      ..++|+++||||+++||.+++++|+++|++|++++|+.++...  .........+.+|+.+.+.+++.+.       ..|
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVD   81 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccccccccccc
Confidence            3578999999999999999999999999999999998765221  2234577888999999876665443       578


Q ss_pred             EEEEccccCC----------------CCccceehhhHHHHHHHHHHHHc----------CCCEEEEeeccccCCCCCCcc
Q 029125          124 AVISCVGGFG----------------SNSYMYKINGTANINAIRAASEK----------GVKRFVYISAADFGVANYLLQ  177 (198)
Q Consensus       124 ~vi~~ag~~~----------------~~~~~~~~n~~~~~~~~~a~~~~----------~~~~~v~~Ss~~~~~~~~~~~  177 (198)
                      .++++++...                .|+..+++|+.+++++.+++...          +..+||++||.....+.+...
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~  161 (248)
T d2o23a1          82 VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA  161 (248)
T ss_dssp             EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCH
T ss_pred             ccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCch
Confidence            8888876321                23456789999999999887442          334899999965445667778


Q ss_pred             hHHHHHHHHHHHHHhh
Q 029125          178 GYYEGKRAAETELLTR  193 (198)
Q Consensus       178 ~Y~~sK~~~e~~l~~~  193 (198)
                      .|+.+|++.+.+.+..
T Consensus       162 ~Y~asKaal~~lt~~l  177 (248)
T d2o23a1         162 AYSASKGGIVGMTLPI  177 (248)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999988764

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.69  E-value=1.7e-16  Score=123.30  Aligned_cols=121  Identities=21%  Similarity=0.228  Sum_probs=95.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEccccCC-
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFG-  133 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~~~-  133 (198)
                      |||||||||||||++|+++|.++|++|++++|+.                +|+.|.+++.++++  ++|+|||+++... 
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------~D~~d~~~~~~~l~~~~~d~vih~a~~~~~   65 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------LDITNVLAVNKFFNEKKPNVVINCAAHTAV   65 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------ccCCCHHHHHHHHHHcCCCEEEeecccccc
Confidence            5799999999999999999999999999999852                48999999999987  6799999998654 


Q ss_pred             -----CCccceehhhHHHHHHHHHHHHcCCCEEEEeec-cccCC----------CCCCcchHHHHHHHHHHHHHhhC
Q 029125          134 -----SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGV----------ANYLLQGYYEGKRAAETELLTRY  194 (198)
Q Consensus       134 -----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss-~~~~~----------~~~~~~~Y~~sK~~~e~~l~~~~  194 (198)
                           ........|+.....+.+.+..... .+++.|| .+|+.          +..+...|+.+|...|.++++..
T Consensus        66 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~~  141 (281)
T d1vl0a_          66 DKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALN  141 (281)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHC
T ss_pred             ccccccchhhcccccccccccccccccccc-cccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHHhC
Confidence                 2234556778888888887777655 5666665 44432          23456789999999999998864

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.68  E-value=3.1e-16  Score=122.28  Aligned_cols=130  Identities=24%  Similarity=0.332  Sum_probs=101.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--------ccCCCCeEEEEccCCCHHHHHHHhcCCCEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--------DSWANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--------~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi  126 (198)
                      ++|||||||||||||++++++|+++|++|++++|+......        .....+++++.+|+.+.+.+...+++.+.+|
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi   81 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   81 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence            57899999999999999999999999999999997654221        1124578999999999999999999999999


Q ss_pred             EccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCC----CCCcchHHHHHHHHHHHHHhh
Q 029125          127 SCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVA----NYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       127 ~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~----~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      |+++.         .+..++.++++++...+++++++.|+..+...    ......+...+...+.++++.
T Consensus        82 ~~~~~---------~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (307)
T d1qyca_          82 STVGS---------LQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAE  143 (307)
T ss_dssp             ECCCG---------GGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHHH
T ss_pred             ecccc---------cccchhhHHHHHHHHhccccceeeeccccccccccccccccccccccccccchhhcc
Confidence            98875         34456667889998888889999888543322    223345667777777777654

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.65  E-value=1e-15  Score=119.63  Aligned_cols=138  Identities=14%  Similarity=0.039  Sum_probs=98.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-------ccCCC-----------------CeEEEEccCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWAN-----------------NVIWHQGNLLS  111 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-------~~~~~-----------------~~~~~~~D~~d  111 (198)
                      ++.++||||+++||+++++.|+++|++|++.+++..+..+       .....                 .+..+.+|+++
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence            5689999999999999999999999999998876432111       01112                 23445667888


Q ss_pred             HHHHHHHhc-------CCCEEEEccccCCC----------Cc--------------cceehhhHHHHHHHHHHHH-----
Q 029125          112 SDSWKEALD-------GVTAVISCVGGFGS----------NS--------------YMYKINGTANINAIRAASE-----  155 (198)
Q Consensus       112 ~~~~~~~~~-------~~d~vi~~ag~~~~----------~~--------------~~~~~n~~~~~~~~~a~~~-----  155 (198)
                      .++++++++       ++|++|||||....          ++              ..+.+|+.+.+.+.+++.+     
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            888877654       68999999996421          11              1457888888887777532     


Q ss_pred             -----cCCCEEEEeeccccCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          156 -----KGVKRFVYISAADFGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       156 -----~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                           .+..++++++|.....+.+....|+.+|++.+.+.+..
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~l  204 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSA  204 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHH
Confidence                 12347888888666666777789999999999887754

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.61  E-value=1.7e-15  Score=118.46  Aligned_cols=135  Identities=18%  Similarity=0.216  Sum_probs=90.1

Q ss_pred             EEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcccccCCCCeEEEEccCCCHHH-HHHHh-----cCCCEEEEcccc
Q 029125           59 LLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS-WKEAL-----DGVTAVISCVGG  131 (198)
Q Consensus        59 vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~-----~~~d~vi~~ag~  131 (198)
                      ||||||+||||++|+++|+++|+ +|+++++-..........   .....|..+.+. ....+     ..+++|+|.|+.
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~   78 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV---DLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC   78 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH---TSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccc---ccchhhhccchHHHHHHhhhhcccchhhhhhhccc
Confidence            89999999999999999999995 799987432221110000   011112222222 22222     357899999975


Q ss_pred             CCC----CccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCCC----------CCCcchHHHHHHHHHHHHHhhCCC
Q 029125          132 FGS----NSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVA----------NYLLQGYYEGKRAAETELLTRYPY  196 (198)
Q Consensus       132 ~~~----~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~~----------~~~~~~Y~~sK~~~e~~l~~~~~~  196 (198)
                      ...    .......++.++.++++++...+++.+++.|+.++..+          ..+.+.|+.+|..+|.+++++...
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~  157 (307)
T d1eq2a_          79 SSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPE  157 (307)
T ss_dssp             CCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccc
Confidence            432    23456777899999999999999876655555544322          345678999999999999987543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.60  E-value=4e-15  Score=113.48  Aligned_cols=130  Identities=19%  Similarity=0.169  Sum_probs=97.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc------CCCEEEEccc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD------GVTAVISCVG  130 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d~vi~~ag  130 (198)
                      |+++||||+++||++++++|+++|++|++++|+++.       .+...+.+|+.+......+..      ..+.++++++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG-------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG   74 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-------ccceEeeccccchhhhHHHHHhhhccccccchhhhhh
Confidence            789999999999999999999999999999997543       345678899998776665543      3455555554


Q ss_pred             cCC--------------CCccceehhhHHHHHHHHHHHH----------cCCCEEEEeeccccCCCCCCcchHHHHHHHH
Q 029125          131 GFG--------------SNSYMYKINGTANINAIRAASE----------KGVKRFVYISAADFGVANYLLQGYYEGKRAA  186 (198)
Q Consensus       131 ~~~--------------~~~~~~~~n~~~~~~~~~a~~~----------~~~~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~  186 (198)
                      ...              .++..+++|..+...+.+.+..          .+..+||++||.....+.+....|+.+|++.
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal  154 (241)
T d1uaya_          75 VGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGV  154 (241)
T ss_dssp             CCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             ccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhHHHHHHH
Confidence            211              1234578888888877766532          2345899999965445566778999999999


Q ss_pred             HHHHHhh
Q 029125          187 ETELLTR  193 (198)
Q Consensus       187 e~~l~~~  193 (198)
                      +.+.+..
T Consensus       155 ~~lt~~l  161 (241)
T d1uaya_         155 VALTLPA  161 (241)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9887754

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.57  E-value=7.5e-15  Score=113.32  Aligned_cols=140  Identities=12%  Similarity=0.036  Sum_probs=101.8

Q ss_pred             CCCCeEEEEcCCc--hhHHHHHHHHHHCCCeEEEeecCCCCccc----ccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           54 PPSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        54 ~~~~~vlvtGatG--~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      .++|+++||||+|  +||.++++.|+++|++|++.+|+.+....    .........+..|+.+..++...++       
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            5789999999998  89999999999999999999997543211    1123466788889999877766553       


Q ss_pred             CCCEEEEccccCCCC---------------ccceehhhHHHHHHHHHHHHc--CCCEEEEeeccccCCCCCCcchHHHHH
Q 029125          121 GVTAVISCVGGFGSN---------------SYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGK  183 (198)
Q Consensus       121 ~~d~vi~~ag~~~~~---------------~~~~~~n~~~~~~~~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~Y~~sK  183 (198)
                      .+|++||+++.....               ...+.+|..+...+.+++...  .-+.++++||.....+.+....|+.+|
T Consensus        83 ~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~~Y~~sK  162 (258)
T d1qsga_          83 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAK  162 (258)
T ss_dssp             SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred             ccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcHHHHHHH
Confidence            469999999753211               123356666666666666442  234688888865555556678899999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      ++.+.+.+..
T Consensus       163 aal~~ltr~l  172 (258)
T d1qsga_         163 ASLEANVRYM  172 (258)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999888764

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.55  E-value=5.5e-17  Score=120.50  Aligned_cols=141  Identities=18%  Similarity=0.060  Sum_probs=92.1

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--c--cCCCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D--SWANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~--~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      ...++|+|+||||+|+||+.+++.|+++|++|++++|+.++...  .  ....++.+..+|+.|.+++.+++.++|+|||
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin   98 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFT   98 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEE
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeee
Confidence            35688999999999999999999999999999999998654211  0  1123566788999999999999999999999


Q ss_pred             ccccCC------CCccceehhhHHHHHHHHHHHHcCC----CEEEEeeccccCCCCCCcchHHHHHHHHHHHHHh
Q 029125          128 CVGGFG------SNSYMYKINGTANINAIRAASEKGV----KRFVYISAADFGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       128 ~ag~~~------~~~~~~~~n~~~~~~~~~a~~~~~~----~~~v~~Ss~~~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      |+|...      .|+..+++|+.+..+.+..+.....    +..+..++..++....+...|..+|.+.++++..
T Consensus        99 ~Ag~g~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~y~~sk~a~~~l~~s  173 (191)
T d1luaa1          99 AGAIGLELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIGGLKLKLHRACIAKLFES  173 (191)
T ss_dssp             CCCTTCCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTTCEEEEETTEEEECHHHHHHHHHHHHHHHHHHHTSC
T ss_pred             cCccccccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhccCcEEecceEEEeccCcCcHHHHHHHHHHHHHHhc
Confidence            998521      1233344444443332222111111    1122222233332222334699999988876653

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.55  E-value=2e-14  Score=111.33  Aligned_cols=141  Identities=13%  Similarity=-0.005  Sum_probs=96.4

Q ss_pred             CCCCCeEEEEcCC--chhHHHHHHHHHHCCCeEEEeecCCCCc---ccccCCCCeEEEEccCCCHHHHHHHhc-------
Q 029125           53 PPPSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSS---LRDSWANNVIWHQGNLLSSDSWKEALD-------  120 (198)
Q Consensus        53 ~~~~~~vlvtGat--G~iG~~l~~~l~~~g~~V~~l~r~~~~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~-------  120 (198)
                      ..++|+++||||+  .+||.+++++|+++|++|++.+|+..+.   .......+...+.+|+++++++.++++       
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            4678999999965  4799999999999999999999876542   113335567889999999876655533       


Q ss_pred             ---CCCEEEEccccCCC----Cc-----------cceehhhHHHHHHHHHHHHcC-CCEEEEeeccccCCCCCCcchHHH
Q 029125          121 ---GVTAVISCVGGFGS----NS-----------YMYKINGTANINAIRAASEKG-VKRFVYISAADFGVANYLLQGYYE  181 (198)
Q Consensus       121 ---~~d~vi~~ag~~~~----~~-----------~~~~~n~~~~~~~~~a~~~~~-~~~~v~~Ss~~~~~~~~~~~~Y~~  181 (198)
                         .+|+++||+|....    ..           ..+.++........+.+.... ...+++++|.......+....|+.
T Consensus        83 ~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~~~~y~~  162 (268)
T d2h7ma1          83 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTV  162 (268)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTTHHHHH
T ss_pred             cCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCcccchhhc
Confidence               36999999985321    11           123444444444444444322 224555555444455566779999


Q ss_pred             HHHHHHHHHHhh
Q 029125          182 GKRAAETELLTR  193 (198)
Q Consensus       182 sK~~~e~~l~~~  193 (198)
                      +|.+.+.+++..
T Consensus       163 sK~a~~~ltr~l  174 (268)
T d2h7ma1         163 AKSALESVNRFV  174 (268)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             cccchhhccccc
Confidence            999999988754

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.53  E-value=2.9e-14  Score=110.85  Aligned_cols=141  Identities=12%  Similarity=0.016  Sum_probs=94.0

Q ss_pred             CCCCCeEEEEcCCc--hhHHHHHHHHHHCCCeEEEeecCCCCccc----ccCCCCeEEEEccCCCHHHHHHHhc------
Q 029125           53 PPPSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALD------  120 (198)
Q Consensus        53 ~~~~~~vlvtGatG--~iG~~l~~~l~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~~D~~d~~~~~~~~~------  120 (198)
                      ..++|++|||||+|  +||.+++++|+++|++|++++|++.....    ........++.+|+++.+++.++++      
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            35789999999877  89999999999999999999997542111    1123566788999999888777663      


Q ss_pred             -CCCEEEEccccCCCC----------ccce----ehhhHHHHHHHHHHHHc-CCC-EEEEeeccccCCCCCCcchHHHHH
Q 029125          121 -GVTAVISCVGGFGSN----------SYMY----KINGTANINAIRAASEK-GVK-RFVYISAADFGVANYLLQGYYEGK  183 (198)
Q Consensus       121 -~~d~vi~~ag~~~~~----------~~~~----~~n~~~~~~~~~a~~~~-~~~-~~v~~Ss~~~~~~~~~~~~Y~~sK  183 (198)
                       .+|++|||+|.....          ...+    .++......+.....+. +.. .++.+|+.....+.+....|+.+|
T Consensus        82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~~~y~asK  161 (274)
T d2pd4a1          82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAK  161 (274)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred             CCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccccchhhhHHH
Confidence             589999999964311          0111    11222222333333222 222 455555554445566677899999


Q ss_pred             HHHHHHHHhh
Q 029125          184 RAAETELLTR  193 (198)
Q Consensus       184 ~~~e~~l~~~  193 (198)
                      .+.+.+++..
T Consensus       162 ~al~~ltr~l  171 (274)
T d2pd4a1         162 AALESAVRYL  171 (274)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhh
Confidence            9999887753

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.45  E-value=4e-13  Score=103.64  Aligned_cols=137  Identities=15%  Similarity=0.171  Sum_probs=90.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-------ccCCCCeEEEEccCCC----HHHHHHH-------
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLS----SDSWKEA-------  118 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-------~~~~~~~~~~~~D~~d----~~~~~~~-------  118 (198)
                      ++.+||||+++||.+++++|+++|++|++++|+.++..+       .........+..|+.+    .+.+.++       
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999998654211       1223456666666644    3334333       


Q ss_pred             hcCCCEEEEccccCCCC---------------------ccceehhhHHHHHHHHHHHHc---------CCCEEEEeeccc
Q 029125          119 LDGVTAVISCVGGFGSN---------------------SYMYKINGTANINAIRAASEK---------GVKRFVYISAAD  168 (198)
Q Consensus       119 ~~~~d~vi~~ag~~~~~---------------------~~~~~~n~~~~~~~~~a~~~~---------~~~~~v~~Ss~~  168 (198)
                      +.++|++|||||.....                     ...+..|..............         ....++.+++..
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence            33699999999954211                     012233444444333333221         123566666655


Q ss_pred             cCCCCCCcchHHHHHHHHHHHHHhh
Q 029125          169 FGVANYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       169 ~~~~~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      ...+.+....|+.||++.+.+.+..
T Consensus       162 ~~~~~~~~~~Y~asKaal~~lt~~l  186 (266)
T d1mxha_         162 TDLPLPGFCVYTMAKHALGGLTRAA  186 (266)
T ss_dssp             GGSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             ccccCcchhhhhhhHHHHhhhHHHH
Confidence            5566677889999999999887754

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.40  E-value=1.2e-12  Score=102.50  Aligned_cols=140  Identities=6%  Similarity=-0.053  Sum_probs=90.6

Q ss_pred             CCCCCeEEEEcCCc--hhHHHHHHHHHHCCCeEEEeecCCCC------------cccccC----CCCe-EEEEcc--C--
Q 029125           53 PPPSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRS------------SLRDSW----ANNV-IWHQGN--L--  109 (198)
Q Consensus        53 ~~~~~~vlvtGatG--~iG~~l~~~l~~~g~~V~~l~r~~~~------------~~~~~~----~~~~-~~~~~D--~--  109 (198)
                      ..++|+++||||+|  +||.++++.|+++|++|++.+|++..            ......    .... ....+|  +  
T Consensus         5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T d1d7oa_           5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccc
Confidence            46789999999887  99999999999999999999875311            000000    0011 122222  1  


Q ss_pred             ----------------CC---HH----HHHHHhcCCCEEEEccccCC------------CCccceehhhHHHHHHHHHHH
Q 029125          110 ----------------LS---SD----SWKEALDGVTAVISCVGGFG------------SNSYMYKINGTANINAIRAAS  154 (198)
Q Consensus       110 ----------------~d---~~----~~~~~~~~~d~vi~~ag~~~------------~~~~~~~~n~~~~~~~~~a~~  154 (198)
                                      .+   .+    .+.+.+.++|++|||||...            .|...+++|+.+.+.+.+++.
T Consensus        85 ~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~  164 (297)
T d1d7oa_          85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL  164 (297)
T ss_dssp             GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             cccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHH
Confidence                            11   11    22233457999999998532            134457899999999998886


Q ss_pred             HcC--CCEEEEeeccc-cCCCCCCcchHHHHHHHHHHHHHh
Q 029125          155 EKG--VKRFVYISAAD-FGVANYLLQGYYEGKRAAETELLT  192 (198)
Q Consensus       155 ~~~--~~~~v~~Ss~~-~~~~~~~~~~Y~~sK~~~e~~l~~  192 (198)
                      ...  .++++.+++.. ..........|..+|.+.+.+.+.
T Consensus       165 ~~~~~~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~  205 (297)
T d1d7oa_         165 PIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRV  205 (297)
T ss_dssp             GGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHH
T ss_pred             HHhhcCCcceeeeehhhcccccccccceecccccccccccc
Confidence            542  22455666533 333445667899999999887764

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.38  E-value=3.7e-12  Score=97.66  Aligned_cols=126  Identities=14%  Similarity=0.124  Sum_probs=84.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHh--------cCCCEEEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL--------DGVTAVIS  127 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--------~~~d~vi~  127 (198)
                      ||+|+||||+++||++++++|+++|++|++++|+..+.            ..|+.+.+......        ..+|++++
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~------------~~d~~~~~~~~~~~~~~~~~~~~~id~lv~   68 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV------------IADLSTAEGRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE------------ECCTTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH------------HHHhcCHHHHHHHHHHHHHHhCCCCcEEEE
Confidence            68999999999999999999999999999999875431            34677665544332        24899999


Q ss_pred             ccccCCC---CccceehhhHHHHHHHHHH----HHcCCCEEEEeecccc----------------------------CCC
Q 029125          128 CVGGFGS---NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADF----------------------------GVA  172 (198)
Q Consensus       128 ~ag~~~~---~~~~~~~n~~~~~~~~~a~----~~~~~~~~v~~Ss~~~----------------------------~~~  172 (198)
                      |||....   +.....+|..+...+.+..    .+........+++...                            ...
T Consensus        69 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~  148 (257)
T d1fjha_          69 CAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGE  148 (257)
T ss_dssp             CCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCT
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCC
Confidence            9986432   2334456766666555543    3333445555544210                            011


Q ss_pred             CCCcchHHHHHHHHHHHHHhh
Q 029125          173 NYLLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       173 ~~~~~~Y~~sK~~~e~~l~~~  193 (198)
                      .+...+|+.+|++.+.+.+..
T Consensus       149 ~~~~~~Y~asKaal~~ltr~l  169 (257)
T d1fjha_         149 QGGNLAYAGSKNALTVAVRKR  169 (257)
T ss_dssp             THHHHHHHHHHHHHHHHHHHT
T ss_pred             CcchHHHHHHhhhhhcccccc
Confidence            222346999999999988764

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.37  E-value=1.3e-12  Score=104.18  Aligned_cols=138  Identities=10%  Similarity=-0.003  Sum_probs=91.7

Q ss_pred             CCeEEEEc--CCchhHHHHHHHHHHCCCeEEEeecCCCCc------------cc-----ccCCCCeEEEEc---------
Q 029125           56 SEKLLVLG--GNGFVGSHICREALDRGLTVASLSRSGRSS------------LR-----DSWANNVIWHQG---------  107 (198)
Q Consensus        56 ~~~vlvtG--atG~iG~~l~~~l~~~g~~V~~l~r~~~~~------------~~-----~~~~~~~~~~~~---------  107 (198)
                      .|.+||||  ++.+||.++++.|+++|++|++..+.....            ..     ...........+         
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            57899999  446999999999999999999987643210            00     000111223333         


Q ss_pred             -----------cCCCHHHHHH-------HhcCCCEEEEccccCC------------CCccceehhhHHHHHHHHHHHHc-
Q 029125          108 -----------NLLSSDSWKE-------ALDGVTAVISCVGGFG------------SNSYMYKINGTANINAIRAASEK-  156 (198)
Q Consensus       108 -----------D~~d~~~~~~-------~~~~~d~vi~~ag~~~------------~~~~~~~~n~~~~~~~~~a~~~~-  156 (198)
                                 |+.+.++++.       .+.++|++|||+|...            .|...+++|+.+.+.+.+.+... 
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                       4444433333       3447999999998532            13446788999988888888654 


Q ss_pred             -CCCEEEEeeccccCCCCC-CcchHHHHHHHHHHHHHhh
Q 029125          157 -GVKRFVYISAADFGVANY-LLQGYYEGKRAAETELLTR  193 (198)
Q Consensus       157 -~~~~~v~~Ss~~~~~~~~-~~~~Y~~sK~~~e~~l~~~  193 (198)
                       .-++||.+||.......+ ....|+.+|++.+.+.+..
T Consensus       162 ~~~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~l  200 (329)
T d1uh5a_         162 KPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVL  200 (329)
T ss_dssp             EEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHH
T ss_pred             ccccccccceeehhcccccccchhhhhhhccccccchhh
Confidence             235899998854333333 3567999999999888754

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.72  E-value=3.2e-08  Score=67.96  Aligned_cols=95  Identities=14%  Similarity=0.217  Sum_probs=69.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEccccCCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVGGFGSN  135 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag~~~~~  135 (198)
                      |+|+|.|+ |.+|+.+++.|.+.|++|++++.+++.........+..++.+|.+|++.+.++ ++++|.++-+...    
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~----   75 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGK----   75 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSC----
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCc----
Confidence            68999998 99999999999999999999998765422111112678999999999999987 5789988875432    


Q ss_pred             ccceehhhHHHHHHHHHHHHcCCCEEEE
Q 029125          136 SYMYKINGTANINAIRAASEKGVKRFVY  163 (198)
Q Consensus       136 ~~~~~~n~~~~~~~~~a~~~~~~~~~v~  163 (198)
                         -+.|..    +...++..+++++|-
T Consensus        76 ---d~~N~~----~~~~~k~~~~~~iI~   96 (132)
T d1lssa_          76 ---EEVNLM----SSLLAKSYGINKTIA   96 (132)
T ss_dssp             ---HHHHHH----HHHHHHHTTCCCEEE
T ss_pred             ---HHHHHH----HHHHHHHcCCceEEE
Confidence               123433    233556677776654

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.56  E-value=1.3e-07  Score=65.82  Aligned_cols=108  Identities=16%  Similarity=0.212  Sum_probs=74.6

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCcccccCC--CCeEEEEccCCCHHHHHHHhcCCCEEEEccccCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWA--NNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~  133 (198)
                      ||.|+||+|.+|++++..|..+|.  ++.+++.++.+.......  ........-+ ...+..+.+++.|+||.++|...
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~-~~~~~~~~~~~aDivVitag~~~   80 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYL-GPEQLPDCLKGCDVVVIPAGVPR   80 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEE-SGGGHHHHHTTCSEEEECCSCCC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEE-cCCChHHHhCCCCEEEECCCcCC
Confidence            799999999999999999998884  788888764321111111  1111111112 24556788899999999999543


Q ss_pred             ----CCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          134 ----SNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       134 ----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                          ...+.+..|..-...+++.+.+.+.+-++.+.|
T Consensus        81 ~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          81 KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence                235567888888889999999988765555544

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.40  E-value=1.1e-06  Score=59.94  Aligned_cols=72  Identities=17%  Similarity=0.159  Sum_probs=58.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEccc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG  130 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag  130 (198)
                      |+++|.|+ |.+|+++++.|.+.|++|++++.+++... ........++.+|.++++.+.++ ++++|.+|-+.+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~-~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~   73 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVN-AYASYATHAVIANATEENELLSLGIRNFEYVIVAIG   73 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHH-HTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHH-HHHHhCCcceeeecccchhhhccCCccccEEEEEcC
Confidence            56888987 99999999999999999999998765422 12234567888999999999887 778999887664

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.39  E-value=8.6e-07  Score=61.76  Aligned_cols=105  Identities=13%  Similarity=0.188  Sum_probs=72.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCccc--------ccCCCCeEEEEccCCCHHHHHHHhcCCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR--------DSWANNVIWHQGNLLSSDSWKEALDGVT  123 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~--------~~~~~~~~~~~~D~~d~~~~~~~~~~~d  123 (198)
                      .+++||.|+|+ |.+|..++..|+.+|  .+|+++++++.....        ...........+|.       +.++++|
T Consensus         3 ~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~-------~~~~~ad   74 (146)
T d1ez4a1           3 PNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY-------SDCKDAD   74 (146)
T ss_dssp             TTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG-------GGGTTCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH-------HHhcccc
Confidence            45679999996 999999999999987  589999987643110        11123345555553       2367899


Q ss_pred             EEEEccccCCC----CccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          124 AVISCVGGFGS----NSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       124 ~vi~~ag~~~~----~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      +||.++|....    .......|..-...+++...+.+.+-++.+.|
T Consensus        75 ivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          75 LVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             EEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            99999986432    24456678887888888888888776665544

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.33  E-value=8.7e-07  Score=62.94  Aligned_cols=74  Identities=19%  Similarity=0.193  Sum_probs=57.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc-cCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-SWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      .|+|+|.|| |.+|.++++.|.++|++|++++|+..+.... ...........+..+.......+...|.++.+..
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~   76 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP   76 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeecc
Confidence            579999997 9999999999999999999999987653221 1223455566677777788888888898887654

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=98.32  E-value=5.5e-06  Score=52.91  Aligned_cols=88  Identities=19%  Similarity=0.264  Sum_probs=63.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~  133 (198)
                      .++|+|+|.|. |..|.++++.|.++|++|++.+.+..............+..+... .+    .+.++|.||..-|...
T Consensus         3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~d~vi~SPGi~~   76 (93)
T d2jfga1           3 YQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLN-DE----WLMAADLIVASPGIAL   76 (93)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCTTSCEEESBCC-HH----HHHHCSEEEECTTSCT
T ss_pred             cCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhhccceeecccc-hh----hhccCCEEEECCCCCC
Confidence            46789999998 889999999999999999999987665433333445556555532 22    3457899999888633


Q ss_pred             CCccceehhhHHHHHHHHHHHHcCCC
Q 029125          134 SNSYMYKINGTANINAIRAASEKGVK  159 (198)
Q Consensus       134 ~~~~~~~~n~~~~~~~~~a~~~~~~~  159 (198)
                      +.            .+++.+++.++.
T Consensus        77 ~~------------~~~~~a~~~gi~   90 (93)
T d2jfga1          77 AH------------PSLSAAADAGIE   90 (93)
T ss_dssp             TS------------HHHHHHHHTTCE
T ss_pred             CC------------HHHHHHHHcCCC
Confidence            21            356777777763

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.23  E-value=8e-06  Score=56.63  Aligned_cols=70  Identities=17%  Similarity=0.313  Sum_probs=43.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC----CeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG----LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g----~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ||+|.|.||||++|+.+++.|+++.    .+++++.++............ .....++.+.+    .++++|++|.+++
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~-~~~~~~~~~~~----~~~~~DivF~a~~   74 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGT-TGTLQDAFDLE----ALKALDIIVTCQG   74 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTC-CCBCEETTCHH----HHHTCSEEEECSC
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCC-ceeeecccchh----hhhcCcEEEEecC
Confidence            6799999999999999999988764    367777655433211111111 11122333333    3568999998885

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.23  E-value=4.5e-06  Score=57.90  Aligned_cols=104  Identities=14%  Similarity=0.052  Sum_probs=70.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCcc-c----------ccCCCCeEEEEccCCCHHHHHHHhcCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSL-R----------DSWANNVIWHQGNLLSSDSWKEALDGVT  123 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~-~----------~~~~~~~~~~~~D~~d~~~~~~~~~~~d  123 (198)
                      |||.|+||+|.+|+.++..|+.++  .++.++++++.... +          .....++.....--.|.    +.+++.|
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~~aD   76 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIIDESD   76 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HHhccce
Confidence            579999999999999999999988  49999998753210 0          01122333322211122    4577999


Q ss_pred             EEEEccccCCCC----ccceehhhHHHHHHHHHHHHcCCCEEEEe
Q 029125          124 AVISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYI  164 (198)
Q Consensus       124 ~vi~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~~~v~~  164 (198)
                      +||.+||....+    ...+..|..-...+++...+.+.+.++.+
T Consensus        77 vVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             EEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence            999999964432    34567788878888888888776666544

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.14  E-value=3.6e-06  Score=58.38  Aligned_cols=104  Identities=17%  Similarity=0.147  Sum_probs=67.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHH-CC--CeEEEeecCCCCccc----ccC--CCCeEEEEccCCCHHHHHHHhcCCCEEEE
Q 029125           57 EKLLVLGGNGFVGSHICREALD-RG--LTVASLSRSGRSSLR----DSW--ANNVIWHQGNLLSSDSWKEALDGVTAVIS  127 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~-~g--~~V~~l~r~~~~~~~----~~~--~~~~~~~~~D~~d~~~~~~~~~~~d~vi~  127 (198)
                      +||.|+|++|.+|++++..|.. .+  .++.+++..+....+    ...  ......+ ..   .+++ +.+++.|+||.
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~-~~---~~~~-~~~~~aDvvvi   75 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SG---EDAT-PALEGADVVLI   75 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEE-CS---SCCH-HHHTTCSEEEE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEE-Ec---CCCc-cccCCCCEEEE
Confidence            5899999999999999988764 33  689999875422100    000  1111221 11   2222 35789999999


Q ss_pred             ccccCC----CCccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          128 CVGGFG----SNSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       128 ~ag~~~----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                      ++|...    ...+....|..-...+.+...+.+.+.++.+-
T Consensus        76 taG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivv  117 (145)
T d2cmda1          76 SAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGII  117 (145)
T ss_dssp             CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             CCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEc
Confidence            999643    23456778888888889999888766544443

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.14  E-value=1.9e-05  Score=55.21  Aligned_cols=109  Identities=17%  Similarity=0.134  Sum_probs=72.5

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCcccc---------cCCCCeEEEEccCCCHHHHHHHhcC
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRD---------SWANNVIWHQGNLLSSDSWKEALDG  121 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~~---------~~~~~~~~~~~D~~d~~~~~~~~~~  121 (198)
                      .+.+++||.|+|+ |.+|+.++..|...+ .++++++.++......         ...........     ...++.+++
T Consensus         3 ~~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-----~~~~~~~~~   76 (154)
T d1pzga1           3 LVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE-----YSYEAALTG   76 (154)
T ss_dssp             CCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE-----CSHHHHHTT
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc-----CchhhhhcC
Confidence            3456789999997 999999998888877 4899998876531110         01111111111     123567789


Q ss_pred             CCEEEEccccCCC---------CccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          122 VTAVISCVGGFGS---------NSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       122 ~d~vi~~ag~~~~---------~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      .|+|+.++|....         ....+..|..-...+++.+.+.+.+-++.+.|
T Consensus        77 adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          77 ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            9999999986432         23455677777788888888888776655544

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.12  E-value=7.2e-07  Score=63.95  Aligned_cols=36  Identities=22%  Similarity=0.345  Sum_probs=33.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      |||.|+||+|.+|++|++.|+++|++|++.+|++++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~   36 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEK   36 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            579999999999999999999999999999998643

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.12  E-value=1.1e-05  Score=56.04  Aligned_cols=104  Identities=13%  Similarity=0.257  Sum_probs=71.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCccc---------ccCCCCeEEEEccCCCHHHHHHHhcCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALDGV  122 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~---------~~~~~~~~~~~~D~~d~~~~~~~~~~~  122 (198)
                      ..++||.|+|+ |.+|..++..|+.+|.  ++.+++++++....         ......+.+...|.       +.+++.
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~da   75 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDA   75 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTC
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhccc
Confidence            34578999997 9999999999999874  89999987543110         11123344444443       347789


Q ss_pred             CEEEEccccCCC----CccceehhhHHHHHHHHHHHHcCCCEE-EEee
Q 029125          123 TAVISCVGGFGS----NSYMYKINGTANINAIRAASEKGVKRF-VYIS  165 (198)
Q Consensus       123 d~vi~~ag~~~~----~~~~~~~n~~~~~~~~~a~~~~~~~~~-v~~S  165 (198)
                      |+||.++|....    ..+....|..-...+++...+.+.+.+ +.+|
T Consensus        76 Dvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          76 DLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             SEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             eeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            999999996442    345567777777788888888776644 4443

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=98.05  E-value=1.5e-05  Score=54.95  Aligned_cols=101  Identities=16%  Similarity=0.124  Sum_probs=69.6

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCcc------c----ccCCCCeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           58 KLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSL------R----DSWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~------~----~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      ||.|+||+|.+|+.++..|+.++.  ++.+++.......      +    ........+...|.   +    .+++.|+|
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~----~~~~aDiV   74 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---E----DTAGSDVV   74 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---G----GGTTCSEE
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---H----HhhhcCEE
Confidence            799999999999999999999984  7888886422100      0    01234445544443   2    35799999


Q ss_pred             EEccccCCCC----ccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       126 i~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                      +.+||....+    .+.+..|..-...+++...+.+.+-++.+-
T Consensus        75 vitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivv  118 (142)
T d1o6za1          75 VITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTT  118 (142)
T ss_dssp             EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEC
T ss_pred             EEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence            9999965433    345677877778888888888766554443

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.03  E-value=2e-05  Score=54.25  Aligned_cols=101  Identities=11%  Similarity=0.156  Sum_probs=65.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCcccc--------cCCCCeEEEEccCCCHHHHHHHhcCCCEEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRD--------SWANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~~--------~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi  126 (198)
                      +||.|+|+ |.+|..++..|+.++.  ++.+++++++.....        ..........+|       .+.+++.|+|+
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-------~~~~~~adivv   73 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD-------YSDVKDCDVIV   73 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C-------GGGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc-------HHHhCCCceEE
Confidence            58999997 9999999999999874  899999876542110        111233333222       23477899999


Q ss_pred             EccccCCC----CccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          127 SCVGGFGS----NSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       127 ~~ag~~~~----~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                      .++|....    .......|..-...+++.+.+.+.+-++.+-
T Consensus        74 itag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivv  116 (142)
T d1y6ja1          74 VTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV  116 (142)
T ss_dssp             ECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred             EecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEe
Confidence            99996432    2345667777777888888888766544443

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=98.02  E-value=1.1e-05  Score=56.19  Aligned_cols=74  Identities=19%  Similarity=0.257  Sum_probs=59.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCc---ccccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS---LRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG  130 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~---~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag  130 (198)
                      +-+|+|.|. |-+|..+++.|.++|++|++++.++++.   .......++.++.+|.+|++.+.++ ++++|.||-+..
T Consensus         3 knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~   80 (153)
T d1id1a_           3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccc
Confidence            347999998 8999999999999999999999876431   1222346899999999999998876 568999988764

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.98  E-value=4.8e-05  Score=50.06  Aligned_cols=69  Identities=17%  Similarity=0.319  Sum_probs=54.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVIS  127 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~  127 (198)
                      ...+|.|.|| |.+|+.++....+-|++|++++.+++.....   -.-.++.+|+.|.+.+.++..  ++|+|-.
T Consensus        10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~---va~~~i~~~~~d~~~l~~~~~~~~~DviT~   80 (111)
T d1kjqa2          10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMH---VAHRSHVINMLDGDALRRVVELEKPHYIVP   80 (111)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGG---GSSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhh---cCCeEEECCCCCHHHHHHHHHhhCCceEEE
Confidence            4568999996 9999999999999999999999876543221   122678899999999988764  6898843

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.96  E-value=3.6e-05  Score=52.91  Aligned_cols=102  Identities=12%  Similarity=0.034  Sum_probs=68.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCcccc---------cCCCCeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRD---------SWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~~---------~~~~~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      +||.|+|| |.+|..++..|+..|  .++.++++++......         .......+...+  |.    +.+++.|+|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~----~~~~dadvv   73 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DY----ADTANSDIV   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CH----HHhcCCeEE
Confidence            57999996 999999999999987  5999999876542110         012233333222  22    346799999


Q ss_pred             EEccccCCCC----ccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       126 i~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                      +.++|....+    ......|..-...+++...+.+.+-++.+-
T Consensus        74 vitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivv  117 (142)
T d1guza1          74 IITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVV  117 (142)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred             EEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEe
Confidence            9999964322    344566777777888888887766555543

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.90  E-value=1.1e-05  Score=57.33  Aligned_cols=75  Identities=21%  Similarity=0.214  Sum_probs=50.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      .++.+|+|+||+|.+|...++.+...|++|++.++++++.... ..-+...+ .|..+........+++|+||.+.|
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~-~~lGa~~~-i~~~~~~~~~~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP-LALGAEEA-ATYAEVPERAKAWGGLDLVLEVRG  100 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH-HHTTCSEE-EEGGGHHHHHHHTTSEEEEEECSC
T ss_pred             CCCCEEEEEeccccchhhhhhhhcccccccccccccccccccc-ccccccee-eehhhhhhhhhccccccccccccc
Confidence            3567999999999999999999989999999999875442211 11122211 244443322334567999999876

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.89  E-value=3.1e-05  Score=53.57  Aligned_cols=102  Identities=15%  Similarity=0.145  Sum_probs=68.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCccc---------ccCCCCeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~---------~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      |||.|+|+ |.+|..++..|+.+|  .+++++++++.+...         ............|   .    +.+++.|+|
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~----~~l~~adiV   73 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---W----AALADADVV   73 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---G----GGGTTCSEE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---H----HHhccccEE
Confidence            68999996 999999999999887  489999987543110         0112233444444   2    336789999


Q ss_pred             EEccccCC--------CCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          126 ISCVGGFG--------SNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       126 i~~ag~~~--------~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      |.++|...        ........|..-...+.+...+.+.+-++.+-|
T Consensus        74 VitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence            99999543        122345667777778888888887765555543

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.89  E-value=2.7e-05  Score=53.47  Aligned_cols=102  Identities=18%  Similarity=0.170  Sum_probs=69.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCccc--------ccCCCCeEEEEccCCCHHHHHHHhcCCCEEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR--------DSWANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~--------~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi  126 (198)
                      +||.|+|+ |.+|..++..|+.++  .++.+++++++....        ............|   .    +.+++.|+||
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~----~~~~~adivv   72 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---Y----ADLKGSDVVI   72 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---G----GGGTTCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---H----HHhcCCCEEE
Confidence            58999997 999999999998877  589999987543110        0112334444433   2    3467999999


Q ss_pred             EccccCCCC----ccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          127 SCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       127 ~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      .++|....+    .+.+..|..-...+++...+.+.+-++.+-|
T Consensus        73 itag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EecccccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence            999965432    3455667777778888888887766655543

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.88  E-value=1.1e-05  Score=57.73  Aligned_cols=78  Identities=22%  Similarity=0.220  Sum_probs=52.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHHHHHHHh--cCCCEEEEccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEAL--DGVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~--~~~d~vi~~ag  130 (198)
                      .++.+|+|+||+|.+|...++.....|++|+++++++++... ........+..-|-...+.+.+..  +++|+||.+.|
T Consensus        28 ~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG  107 (182)
T d1v3va2          28 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG  107 (182)
T ss_dssp             CSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEecC
Confidence            357899999999999999999999999999999987544211 112222222222323334444443  36999999987


Q ss_pred             c
Q 029125          131 G  131 (198)
Q Consensus       131 ~  131 (198)
                      .
T Consensus       108 ~  108 (182)
T d1v3va2         108 G  108 (182)
T ss_dssp             H
T ss_pred             c
Confidence            4

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=8.8e-06  Score=57.85  Aligned_cols=75  Identities=19%  Similarity=0.208  Sum_probs=50.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHHHHH---HHhc--CCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWK---EALD--GVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~~---~~~~--~~d~vi~  127 (198)
                      .++.+|+|+||+|.+|...++.+...|.+|+++++++++... ... .--.++  |..+.+..+   +...  ++|++|.
T Consensus        27 ~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~-Ga~~vi--~~~~~~~~~~i~~~t~~~g~d~v~d  103 (174)
T d1yb5a2          27 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN-GAHEVF--NHREVNYIDKIKKYVGEKGIDIIIE  103 (174)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCSEEE--ETTSTTHHHHHHHHHCTTCEEEEEE
T ss_pred             CCCCEEEEEeccccccccccccccccCccccccccccccccccccc-Cccccc--ccccccHHHHhhhhhccCCceEEee
Confidence            356799999999999999999998999999999986543211 111 111333  555544333   3332  5899999


Q ss_pred             cccc
Q 029125          128 CVGG  131 (198)
Q Consensus       128 ~ag~  131 (198)
                      +.|.
T Consensus       104 ~~g~  107 (174)
T d1yb5a2         104 MLAN  107 (174)
T ss_dssp             SCHH
T ss_pred             cccH
Confidence            8874

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.83  E-value=6.2e-05  Score=51.81  Aligned_cols=102  Identities=16%  Similarity=0.129  Sum_probs=68.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCccc--------ccCCCCeEEEEccCCCHHHHHHHhcCCCEEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR--------DSWANNVIWHQGNLLSSDSWKEALDGVTAVI  126 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~--------~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi  126 (198)
                      .||.|+|+ |.+|.+++..|+.+|.  ++.++++++.....        ........+...+  +.    +.+++.|+||
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~----~~~~daDvVV   74 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DP----EICRDADMVV   74 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CH----HHhhCCcEEE
Confidence            47999997 9999999999999884  89999987643111        0112223333222  12    3467899999


Q ss_pred             EccccCCCC----ccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          127 SCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       127 ~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                      .++|....+    .+.+..|..-...+++...+.+.+.++.+-
T Consensus        75 itaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivv  117 (143)
T d1llda1          75 ITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLI  117 (143)
T ss_dssp             ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             EecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Confidence            999975432    345667777777888888888766554443

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.83  E-value=0.00013  Score=51.00  Aligned_cols=103  Identities=15%  Similarity=0.070  Sum_probs=69.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCccc---------ccCCCCeEEEEccCCCHHHHHHHhcCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALDGVT  123 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~---------~~~~~~~~~~~~D~~d~~~~~~~~~~~d  123 (198)
                      +.+||.|+|+ |.+|..++..|+.+|.  ++++++++++....         .........-.+|   .    +.+++.|
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d---~----~~~~~ad   90 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD---Y----SVTANSK   90 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS---G----GGGTTCS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc---h----hhccccc
Confidence            4569999996 9999999999999984  89999987543110         0111222222222   2    3367899


Q ss_pred             EEEEccccCCC----CccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          124 AVISCVGGFGS----NSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       124 ~vi~~ag~~~~----~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                      +|+.+||....    .......|..-...++....+.+.+-++.+-
T Consensus        91 iVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivv  136 (160)
T d1i0za1          91 IVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVV  136 (160)
T ss_dssp             EEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             EEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEe
Confidence            99999996542    2445667777777888888887766554443

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.81  E-value=5.1e-06  Score=58.51  Aligned_cols=73  Identities=19%  Similarity=0.266  Sum_probs=53.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ...+++|+|+|+ |.+|+.+++.|...|. ++++..|+.++.......-+..+     .+-+++.+.+.++|+||.+.+.
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~-----~~~~~~~~~l~~~Divi~atss   94 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA-----VRFDELVDHLARSDVVVSATAA   94 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE-----CCGGGHHHHHHTCSEEEECCSS
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhccc-----ccchhHHHHhccCCEEEEecCC
Confidence            357889999998 9999999999999997 68999987554221111112222     2345677888899999999874

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.79  E-value=0.00013  Score=51.89  Aligned_cols=107  Identities=12%  Similarity=0.066  Sum_probs=66.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-------eEEEeecCCCCcc-c-------ccCCCCeEEEEccCCCHHHHHHHh
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRSSL-R-------DSWANNVIWHQGNLLSSDSWKEAL  119 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-------~V~~l~r~~~~~~-~-------~~~~~~~~~~~~D~~d~~~~~~~~  119 (198)
                      +..+|.||||+|.||.+++..|+..+.       .+.+++....... +       .........+..    ..+..+.+
T Consensus        23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~----~~~~~~~~   98 (175)
T d7mdha1          23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI----GIDPYEVF   98 (175)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE----ESCHHHHT
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc----cccchhhc
Confidence            445899999999999999999987531       4455554432210 0       000111211111    11245778


Q ss_pred             cCCCEEEEccccCCC----CccceehhhHHHHHHHHHHHHcCC-C-EEEEee
Q 029125          120 DGVTAVISCVGGFGS----NSYMYKINGTANINAIRAASEKGV-K-RFVYIS  165 (198)
Q Consensus       120 ~~~d~vi~~ag~~~~----~~~~~~~n~~~~~~~~~a~~~~~~-~-~~v~~S  165 (198)
                      ++.|+||..+|....    ..+.+..|..-...+.+++.+... . .++.+|
T Consensus        99 ~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          99 EDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             cCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            999999999986543    345677787777888888888643 3 344443

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.77  E-value=7.9e-05  Score=51.86  Aligned_cols=35  Identities=26%  Similarity=0.296  Sum_probs=32.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      |||+|.|+ |.+|..++..|++.|++|.+++|++..
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            68999998 999999999999999999999998754

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.76  E-value=0.00029  Score=48.51  Aligned_cols=93  Identities=19%  Similarity=0.294  Sum_probs=51.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC----CeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG----LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g----~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      |||.|.||||++|+.+++.|+++.    .++..+..+.............. ...+..+.    ..++++|++|.+... 
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~~~-~~~~~~~~----~~~~~~DvvF~alp~-   74 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAG-MLHDAFDI----ESLKQLDAVITCQGG-   74 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSCCC-BCEETTCH----HHHTTCSEEEECSCH-
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCcce-eeecccch----hhhccccEEEEecCc-
Confidence            579999999999999999988753    35665544322211111111111 11122233    335789999988753 


Q ss_pred             CCCccceehhhHHHHHHHHHHHHcCCC-EEEEeec
Q 029125          133 GSNSYMYKINGTANINAIRAASEKGVK-RFVYISA  166 (198)
Q Consensus       133 ~~~~~~~~~n~~~~~~~~~a~~~~~~~-~~v~~Ss  166 (198)
                                 .-...+...+.+.+.+ .+|=.|+
T Consensus        75 -----------~~s~~~~~~l~~~g~~~~VIDlSs   98 (147)
T d1mb4a1          75 -----------SYTEKVYPALRQAGWKGYWIDAAS   98 (147)
T ss_dssp             -----------HHHHHHHHHHHHTTCCSEEEESSS
T ss_pred             -----------hHHHHHhHHHHHcCCceEEEeCCc
Confidence                       1123445566666654 3444444

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.75  E-value=2.8e-05  Score=53.66  Aligned_cols=34  Identities=21%  Similarity=0.325  Sum_probs=27.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC---eEEEeecC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL---TVASLSRS   89 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~---~V~~l~r~   89 (198)
                      +++|.|.||||++|+.+++.|.+++|   ++..+..+
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~   38 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA   38 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeec
Confidence            47899999999999999999976553   67666543

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.75  E-value=8.6e-05  Score=50.98  Aligned_cols=103  Identities=16%  Similarity=0.153  Sum_probs=67.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCcccc---------cCCCCeEEE-EccCCCHHHHHHHhcCCCE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRD---------SWANNVIWH-QGNLLSSDSWKEALDGVTA  124 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~~---------~~~~~~~~~-~~D~~d~~~~~~~~~~~d~  124 (198)
                      ++||.|+|+ |.+|..++..|+.++ .++.+++.+++.....         .......+. ..|   .    +.+++.|+
T Consensus         1 r~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d---~----~~~~~adv   72 (142)
T d1uxja1           1 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNN---Y----ADTANSDV   72 (142)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC---G----GGGTTCSE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCc---H----HHhcCCCE
Confidence            368999996 999999999998877 4899999876541110         011222232 222   2    23568999


Q ss_pred             EEEccccCC----CCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          125 VISCVGGFG----SNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       125 vi~~ag~~~----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      ||-++|...    ...+.+..|..-...+++...+.+.+.++.+.|
T Consensus        73 vvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          73 IVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             EEECCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred             EEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence            999999643    234556778777778888888887766655544

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.75  E-value=7.6e-05  Score=52.25  Aligned_cols=104  Identities=14%  Similarity=0.054  Sum_probs=68.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCCCccc---------ccCCCCeEEEEccCCCHHHHHHHhcCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALDGV  122 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~~~~~---------~~~~~~~~~~~~D~~d~~~~~~~~~~~  122 (198)
                      .++.||.|+|+ |.+|..++..|+.+|.  ++++++++++....         ............|.       +.+++.
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~-------~~~~~a   88 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY-------NVSANS   88 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG-------GGGTTE
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch-------hhhccc
Confidence            34568999996 9999999999999874  89999987543110         01112222223332       345789


Q ss_pred             CEEEEccccCC----CCccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          123 TAVISCVGGFG----SNSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       123 d~vi~~ag~~~----~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                      |+||.++|...    .....+..|..-...+++...+.+.+-++.+-
T Consensus        89 divvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivv  135 (159)
T d2ldxa1          89 KLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVV  135 (159)
T ss_dssp             EEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEEC
T ss_pred             cEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEe
Confidence            99999998643    23455677777777777777777766554443

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.74  E-value=0.00014  Score=50.35  Aligned_cols=104  Identities=14%  Similarity=0.184  Sum_probs=69.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCcccc---------cCCCCeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRD---------SWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~~---------~~~~~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      +.||.|+|+ |.+|..++..|..++ .++.+++++++.....         .......+...+  +    .+.+++.|+|
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~----~~~~~~advv   75 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--T----YDDLAGADVV   75 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--C----GGGGTTCSEE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--c----ccccCCCcEE
Confidence            458999996 999999998888777 5899999876542110         011223333322  1    2446789999


Q ss_pred             EEccccCCC---------CccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          126 ISCVGGFGS---------NSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       126 i~~ag~~~~---------~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      |.++|....         ....+..|..-...+++...+.+.+-++.+-|
T Consensus        76 vitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          76 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            999995432         23446677777788888888887766555443

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.72  E-value=2e-05  Score=55.95  Aligned_cols=74  Identities=15%  Similarity=0.052  Sum_probs=48.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-------ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-------~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~  128 (198)
                      .|+|.|.|+ |.+|..++..|.++|++|++++|++.....       ..................++.++++++|+||.+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~   79 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV   79 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence            379999998 999999999999999999999997533110       000111111111111122356778899999987


Q ss_pred             cc
Q 029125          129 VG  130 (198)
Q Consensus       129 ag  130 (198)
                      ..
T Consensus        80 v~   81 (184)
T d1bg6a2          80 VP   81 (184)
T ss_dssp             SC
T ss_pred             Ec
Confidence            64

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.71  E-value=1.9e-05  Score=56.38  Aligned_cols=75  Identities=21%  Similarity=0.122  Sum_probs=48.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCH-HHHHHHh--cCCCEEEEcccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSS-DSWKEAL--DGVTAVISCVGG  131 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~--~~~d~vi~~ag~  131 (198)
                      ++.+|||+||+|++|...++.+...|.+|+...+++++.........-.++  |..+. ++.....  +++|+||.+.|.
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~vi--~~~~~~~~~~~~~~~~gvD~vid~vgg  108 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVL--AREDVMAERIRPLDKQRWAAAVDPVGG  108 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEE--ECC---------CCSCCEEEEEECSTT
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcccceee--ecchhHHHHHHHhhccCcCEEEEcCCc
Confidence            467899999999999999999889999999999876653221111111223  32221 1122222  268999999884

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.69  E-value=7.6e-05  Score=53.31  Aligned_cols=76  Identities=14%  Similarity=0.196  Sum_probs=58.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccc--c---c--CCCCeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR--D---S--WANNVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~--~---~--~~~~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      .++++|+|.|+ |+.|++++..|++.|. ++++.+|+++....  .   .  ..........|+.+.+.+...+..+|+|
T Consensus        16 l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii   94 (182)
T d1vi2a1          16 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL   94 (182)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhccccee
Confidence            46789999998 8999999999999986 78888987654211  0   0  1123445567889999999989999999


Q ss_pred             EEccc
Q 029125          126 ISCVG  130 (198)
Q Consensus       126 i~~ag  130 (198)
                      ||+..
T Consensus        95 IN~Tp   99 (182)
T d1vi2a1          95 TNGTK   99 (182)
T ss_dssp             EECSS
T ss_pred             ccccC
Confidence            99975

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.67  E-value=0.0001  Score=51.19  Aligned_cols=107  Identities=14%  Similarity=0.079  Sum_probs=64.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC----e-E--EEeecCCCCccc--------ccCCCCeEEEEccCCCHHHHHHHh
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL----T-V--ASLSRSGRSSLR--------DSWANNVIWHQGNLLSSDSWKEAL  119 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~----~-V--~~l~r~~~~~~~--------~~~~~~~~~~~~D~~d~~~~~~~~  119 (198)
                      +++||.|+||+|++|++++..|+..+.    . +  .+++-.......        .........+...    ....+.+
T Consensus         3 ~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~   78 (154)
T d1y7ta1           3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT----DDPKVAF   78 (154)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccC----Cchhhhc
Confidence            456999999999999999999998652    1 1  222211111000        0011222333222    2235778


Q ss_pred             cCCCEEEEccccCCCC----ccceehhhHHHHHHHHHHHHcCC-CE-EEEee
Q 029125          120 DGVTAVISCVGGFGSN----SYMYKINGTANINAIRAASEKGV-KR-FVYIS  165 (198)
Q Consensus       120 ~~~d~vi~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~-~~-~v~~S  165 (198)
                      ++.|+||.++|....+    .+.+..|..-...+.+...+... .- ++.+|
T Consensus        79 ~~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          79 KDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ccccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            9999999999965432    34566777777888888887543 33 44444

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.66  E-value=0.00033  Score=45.87  Aligned_cols=95  Identities=18%  Similarity=0.161  Sum_probs=66.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccccc-CCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS-WANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ..++++|+|.|+ |.+|..-++.|++.|.+|++.+....+..... ...++.++..++.+.+     +.+.+.|+.+.+-
T Consensus         9 ~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~d-----l~~~~lv~~at~d   82 (113)
T d1pjqa1           9 QLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETL-----LDSCWLAIAATDD   82 (113)
T ss_dssp             CCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGG-----GTTCSEEEECCSC
T ss_pred             EeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHHH-----hCCCcEEeecCCC
Confidence            457899999998 99999999999999999999987655433221 2346778777765332     5678888876532


Q ss_pred             CCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       132 ~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      .           .-...+.+.|++.++  +|++..
T Consensus        83 ~-----------~~n~~i~~~a~~~~i--lVNv~D  104 (113)
T d1pjqa1          83 D-----------TVNQRVSDAAESRRI--FCNVVD  104 (113)
T ss_dssp             H-----------HHHHHHHHHHHHTTC--EEEETT
T ss_pred             H-----------HHHHHHHHHHHHcCC--EEEeCC
Confidence            1           112355677777765  666653

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.66  E-value=0.00017  Score=53.20  Aligned_cols=73  Identities=15%  Similarity=0.135  Sum_probs=51.7

Q ss_pred             CCCCeEEEEc----------------CCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHH--
Q 029125           54 PPSEKLLVLG----------------GNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSW--  115 (198)
Q Consensus        54 ~~~~~vlvtG----------------atG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~--  115 (198)
                      ..+++||||+                .+|..|.+|++.+..+|++|+++.-.....    .+.++..+..  ...+++  
T Consensus         4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~----~p~~~~~~~~--~t~~~m~~   77 (223)
T d1u7za_           4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP----TPPFVKRVDV--MTALEMEA   77 (223)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC----CCTTEEEEEC--CSHHHHHH
T ss_pred             cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC----ccccccccee--hhhHHHHH
Confidence            4567777775                678999999999999999999987643321    1345666544  333333  


Q ss_pred             --HHHhcCCCEEEEccccC
Q 029125          116 --KEALDGVTAVISCVGGF  132 (198)
Q Consensus       116 --~~~~~~~d~vi~~ag~~  132 (198)
                        .+.+++.|++|++|+..
T Consensus        78 ~~~~~~~~~D~~i~aAAvs   96 (223)
T d1u7za_          78 AVNASVQQQNIFIGCAAVA   96 (223)
T ss_dssp             HHHHHGGGCSEEEECCBCC
T ss_pred             HHHhhhccceeEeeeechh
Confidence              34456899999999864

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.62  E-value=0.00012  Score=50.17  Aligned_cols=103  Identities=15%  Similarity=0.067  Sum_probs=68.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCccc---------ccCCCCeEEEEccCCCHHHHHHHhcCCCEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALDGVTAV  125 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~---------~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v  125 (198)
                      |||.|+|+ |.+|..++..|+.+|  .++.+++++++....         ........+...+  |.    +.+++.|+|
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~--d~----~~~~~adiV   73 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DY----SLLKGSEII   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEES--CG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCC--CH----HHhccccEE
Confidence            58999997 999999999999887  489999987543111         0111222333221  12    357789999


Q ss_pred             EEccccCCCC----ccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       126 i~~ag~~~~~----~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      |..+|....+    ......|..-...+.+.+.+.+.+.++.+-|
T Consensus        74 vitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            9999864432    3445667777778888888877665555544

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.61  E-value=1.5e-05  Score=56.77  Aligned_cols=74  Identities=23%  Similarity=0.209  Sum_probs=51.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHH---HHHHHhc--CCCEEEEc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSD---SWKEALD--GVTAVISC  128 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~---~~~~~~~--~~d~vi~~  128 (198)
                      .+.+|+|+||+|.+|..+++.+...|.+|+++++++.+... .... .-+++  |..+++   .+.++-.  ++|+||.+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lG-a~~vi--~~~~~d~~~~v~~~t~g~g~d~v~d~  104 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAG-AWQVI--NYREEDLVERLKEITGGKKVRVVYDS  104 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHT-CSEEE--ETTTSCHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcC-CeEEE--ECCCCCHHHHHHHHhCCCCeEEEEeC
Confidence            46799999999999999999998899999999988654221 1111 12333  555543   3444333  57999998


Q ss_pred             ccc
Q 029125          129 VGG  131 (198)
Q Consensus       129 ag~  131 (198)
                      .|.
T Consensus       105 ~g~  107 (179)
T d1qora2         105 VGR  107 (179)
T ss_dssp             SCG
T ss_pred             ccH
Confidence            874

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.60  E-value=4.1e-05  Score=52.96  Aligned_cols=40  Identities=23%  Similarity=0.416  Sum_probs=36.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      ...+++|.|+||.|.+|..+++.|.++|++|.+.+|+...
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~   45 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA   45 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccc
Confidence            4568899999999999999999999999999999998654

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.57  E-value=5.9e-05  Score=53.31  Aligned_cols=101  Identities=15%  Similarity=0.166  Sum_probs=61.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--ccCC--CCeEEEEccCCCHHHHHHHhcCCCEEEEc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWA--NNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~~~--~~~~~~~~D~~d~~~~~~~~~~~d~vi~~  128 (198)
                      ..++++|+|.|+ |+.+++++..|.+.|.+|+++.|+..+...  ....  ..+..+  +..+.     ...++|+||++
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~--~~~~~-----~~~~~dliIN~   86 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQAL--SMDEL-----EGHEFDLIINA   86 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEEC--CSGGG-----TTCCCSEEEEC
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccc--ccccc-----cccccceeecc
Confidence            346789999997 999999999999999999999998654221  1111  122222  22211     12468999998


Q ss_pred             cccC--CC-----------CccceehhhHH-HHHHHHHHHHcCCCEE
Q 029125          129 VGGF--GS-----------NSYMYKINGTA-NINAIRAASEKGVKRF  161 (198)
Q Consensus       129 ag~~--~~-----------~~~~~~~n~~~-~~~~~~a~~~~~~~~~  161 (198)
                      ....  .+           ....+++.+.- .-.+++.+++.|.+++
T Consensus        87 Tp~G~~~~~~~~~~~~~~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~  133 (170)
T d1nyta1          87 TSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSKRN  133 (170)
T ss_dssp             CSCGGGTCCCCCCGGGCCTTCEEEESCCCSSCCHHHHHHHHTTCCEE
T ss_pred             cccCcccCCCCCcHHHhccCcEEEEeecCCCCCHHHHHHHHcCCCcc
Confidence            7421  11           11123444321 1256788888876533

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.56  E-value=5.7e-05  Score=53.68  Aligned_cols=75  Identities=24%  Similarity=0.241  Sum_probs=50.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCH---HHHHHHh--cCCCEEEEcc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSS---DSWKEAL--DGVTAVISCV  129 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~--~~~d~vi~~a  129 (198)
                      ++.+|+|+||+|.+|...++.+...|.+|+++++++++. +.....+...+ .|..++   +.+.+..  +++|++|.+.
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~-~~l~~~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~d~~  102 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR-EMLSRLGVEYV-GDSRSVDFADEILELTDGYGVDVVLNSL  102 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHHTTCCSEE-EETTCSTHHHHHHHHTTTCCEEEEEECC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccc-ccccccccccc-ccCCccCHHHHHHHHhCCCCEEEEEecc
Confidence            467999999999999999998888899999999875432 11111222221 244443   3344433  3699999998


Q ss_pred             cc
Q 029125          130 GG  131 (198)
Q Consensus       130 g~  131 (198)
                      |.
T Consensus       103 g~  104 (183)
T d1pqwa_         103 AG  104 (183)
T ss_dssp             CT
T ss_pred             cc
Confidence            73

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.54  E-value=0.0002  Score=49.72  Aligned_cols=107  Identities=11%  Similarity=-0.026  Sum_probs=65.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-------eEEEeecCCCCccc--------ccCCCCeEEEEccCCCHHHHHHHh
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRSSLR--------DSWANNVIWHQGNLLSSDSWKEAL  119 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-------~V~~l~r~~~~~~~--------~~~~~~~~~~~~D~~d~~~~~~~~  119 (198)
                      +++||.|+||+|.+|.+++..|+..+.       .+.+++.++.....        .........+..  .  .+..+.+
T Consensus         2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~--~~~~~~~   77 (154)
T d5mdha1           2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA--T--DKEEIAF   77 (154)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE--E--SCHHHHT
T ss_pred             CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc--C--ccccccc
Confidence            457999999999999999999986542       34555543322110        001112222211  1  1235678


Q ss_pred             cCCCEEEEccccCC----CCccceehhhHHHHHHHHHHHHc-CCCE-EEEee
Q 029125          120 DGVTAVISCVGGFG----SNSYMYKINGTANINAIRAASEK-GVKR-FVYIS  165 (198)
Q Consensus       120 ~~~d~vi~~ag~~~----~~~~~~~~n~~~~~~~~~a~~~~-~~~~-~v~~S  165 (198)
                      ++.|+||-++|...    ...+.+..|..-...+.+...+. +..- ++.+|
T Consensus        78 ~~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          78 KDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             TTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CCceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            89999999999643    33456777877777888887665 3333 34444

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=97.52  E-value=0.00022  Score=45.50  Aligned_cols=75  Identities=13%  Similarity=0.146  Sum_probs=52.5

Q ss_pred             CCCCCeEEEEcCCchhH-HHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           53 PPPSEKLLVLGGNGFVG-SHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG-~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      +...++|.+.|- |++| ..|++.|.++|++|...|+...+........++.+..++-  ++    .+++.|.||...+.
T Consensus         5 ~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~--~~----~i~~~d~vV~S~AI   77 (96)
T d1p3da1           5 MRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHA--EE----HIEGASVVVVSSAI   77 (96)
T ss_dssp             CTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCC--GG----GGTTCSEEEECTTS
T ss_pred             chhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCc--cc----cCCCCCEEEECCCc
Confidence            346789999986 5666 5679999999999999998765533333345666665543  22    23578999998876


Q ss_pred             CCC
Q 029125          132 FGS  134 (198)
Q Consensus       132 ~~~  134 (198)
                      ..+
T Consensus        78 ~~~   80 (96)
T d1p3da1          78 KDD   80 (96)
T ss_dssp             CTT
T ss_pred             CCC
Confidence            443

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.52  E-value=4.9e-05  Score=46.61  Aligned_cols=38  Identities=24%  Similarity=0.302  Sum_probs=33.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      ++.+|+|+||+|++|...++.+...|++|++..+++++
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k   68 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence            46789999999999999999888899999999987654

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.46  E-value=0.0001  Score=51.84  Aligned_cols=74  Identities=19%  Similarity=0.179  Sum_probs=53.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ..+.+|+|.|+ |.+|...++.+...|+++++++++..+... ...... .+  .|..+.+......+++|++|.+.|.
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad-~~--i~~~~~~~~~~~~~~~D~vid~~g~  103 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGAD-EV--VNSRNADEMAAHLKSFDFILNTVAA  103 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCS-EE--EETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccCCc-EE--EECchhhHHHHhcCCCceeeeeeec
Confidence            35679999986 999999998888899999999887654211 111111 22  3666777666667789999999875

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.44  E-value=6.9e-05  Score=52.49  Aligned_cols=34  Identities=26%  Similarity=0.433  Sum_probs=31.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      |+|.|.|. |.+|..+++.|.++|++|++.+|++.
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~   34 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQS   34 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCch
Confidence            57999986 99999999999999999999999754

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.37  E-value=0.00014  Score=51.69  Aligned_cols=72  Identities=10%  Similarity=0.183  Sum_probs=42.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCC--cccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRS--SLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~--~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      |++|.|.||||++|+.+++.|.++. .++..+..+...  ......+....-......+.+   .+.+++|+||.+..
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~---~~~~~~dvvf~a~p   75 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPE---KVSKNCDVLFTALP   75 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHH---HHHHHCSEEEECCS
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccCHh---HhccccceEEEccc
Confidence            6799999999999999999999875 466666433221  111000110111111223343   33457999998765

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.37  E-value=0.00011  Score=49.39  Aligned_cols=69  Identities=17%  Similarity=0.176  Sum_probs=53.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHH-hcCCCEEEEcc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCV  129 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~a  129 (198)
                      |+|+|.|. |-+|+.+++.|.  +++|.+++.++.... .....++.++.+|.+|++.+.++ +++++.+|-+.
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~-~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~   70 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRK-KVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNL   70 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHH-HHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHH-HHHhcCccccccccCCHHHHHHhhhhcCcEEEEec
Confidence            57899997 899999999984  667888887665422 22235789999999999988875 56789888755

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.35  E-value=0.00033  Score=49.77  Aligned_cols=73  Identities=16%  Similarity=0.208  Sum_probs=48.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc------ccC-CCCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSW-ANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~------~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      |+|.|.|+ |..|.+++..|.++|++|.+..|..+++..      ... .-.......++.-.+++.+++++.|+||.+.
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av   79 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence            68999998 999999999999999999999985432110      000 0001111111222456788889999998866


Q ss_pred             c
Q 029125          130 G  130 (198)
Q Consensus       130 g  130 (198)
                      -
T Consensus        80 p   80 (180)
T d1txga2          80 S   80 (180)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.32  E-value=7.3e-05  Score=53.29  Aligned_cols=32  Identities=19%  Similarity=0.453  Sum_probs=27.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC-CeEEEee
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLS   87 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~   87 (198)
                      |++|.|.||||++|+.|++.|..+. .++..+.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~   33 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT   33 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence            6799999999999999999999984 5665553

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.32  E-value=0.00029  Score=44.27  Aligned_cols=84  Identities=17%  Similarity=0.058  Sum_probs=56.4

Q ss_pred             CeEEEEcCCchhHH-HHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCCCC
Q 029125           57 EKLLVLGGNGFVGS-HICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSN  135 (198)
Q Consensus        57 ~~vlvtGatG~iG~-~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~  135 (198)
                      ++|-++|- |++|. .|++.|+++|++|...|+...+........++.+..+.  +++.    ++++|.||...+...++
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh--~~~~----i~~~d~vV~SsAI~~~n   74 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPH--SADN----WYDPDLVIKTPAVRDDN   74 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSC--CTTS----CCCCSEEEECTTCCTTC
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeee--cccc----cCCCCEEEEecCcCCCC
Confidence            67888886 66665 68899999999999999886554333334566665442  2322    35799999988865443


Q ss_pred             ccceehhhHHHHHHHHHHHHcCCC
Q 029125          136 SYMYKINGTANINAIRAASEKGVK  159 (198)
Q Consensus       136 ~~~~~~n~~~~~~~~~a~~~~~~~  159 (198)
                      .+            +.+|++.+++
T Consensus        75 pe------------l~~A~~~gIp   86 (89)
T d1j6ua1          75 PE------------IVRARMERVP   86 (89)
T ss_dssp             HH------------HHHHHHTTCC
T ss_pred             HH------------HHHHHHcCCC
Confidence            22            5666666653

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=0.00041  Score=48.65  Aligned_cols=75  Identities=20%  Similarity=0.170  Sum_probs=50.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccc-ccCCCCeEEEEccCCCHHHHHHHhc-----CCCEEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSWKEALD-----GVTAVIS  127 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~-----~~d~vi~  127 (198)
                      .+.+|+|.|+ |.+|...+..+...|+ +|++.++++.+... +.. .--.++..+-.+..+..+.++     ++|++|.
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~-Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid  103 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI-GADLVLQISKESPQEIARKVEGQLGCKPEVTIE  103 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-TCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEE
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHh-CCcccccccccccccccccccccCCCCceEEEe
Confidence            4568999987 9999999999989998 79999987654221 111 112344444445554444432     6899999


Q ss_pred             cccc
Q 029125          128 CVGG  131 (198)
Q Consensus       128 ~ag~  131 (198)
                      +.|.
T Consensus       104 ~~G~  107 (171)
T d1pl8a2         104 CTGA  107 (171)
T ss_dssp             CSCC
T ss_pred             ccCC
Confidence            9984

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.28  E-value=0.00014  Score=52.67  Aligned_cols=33  Identities=24%  Similarity=0.370  Sum_probs=30.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      |+|.|.|. |++|..++..|++.|++|++++.++
T Consensus         1 MkI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~   33 (202)
T d1mv8a2           1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSS   33 (202)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCH
Confidence            57999986 9999999999999999999999764

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.27  E-value=0.00023  Score=50.53  Aligned_cols=75  Identities=13%  Similarity=0.130  Sum_probs=48.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccc-ccCCCCeEEEEccCCCHHHH----HHHhc--CCCEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR-DSWANNVIWHQGNLLSSDSW----KEALD--GVTAVI  126 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~~~~----~~~~~--~~d~vi  126 (198)
                      .+.+|+|+|+ |.+|...++.+...|+ +|+++++++.+... ..... -.++...-.+..+.    .+...  ++|+||
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa-~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvvi  105 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA-DLTLNRRETSVEERRKAIMDITHGRGADFIL  105 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTC-SEEEETTTSCHHHHHHHHHHHTTTSCEEEEE
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccccccccccccccc-eEEEeccccchHHHHHHHHHhhCCCCceEEe
Confidence            4679999997 9999999999999997 79999987654211 11111 13332222233222    22222  589999


Q ss_pred             Ecccc
Q 029125          127 SCVGG  131 (198)
Q Consensus       127 ~~ag~  131 (198)
                      .+.|.
T Consensus       106 d~vG~  110 (182)
T d1vj0a2         106 EATGD  110 (182)
T ss_dssp             ECSSC
T ss_pred             ecCCc
Confidence            99875

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.24  E-value=0.00039  Score=48.59  Aligned_cols=75  Identities=24%  Similarity=0.214  Sum_probs=49.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccC--CCHHHHHHHh-----cCCCEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNL--LSSDSWKEAL-----DGVTAVI  126 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~--~d~~~~~~~~-----~~~d~vi  126 (198)
                      .+.+|+|+| +|.+|...++.+...|.+|+++++++.+... ....... .+..|-  .+.+++.+.+     .++|+||
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~-~~~~~~~~~~~~~~~~~~~~~~g~g~D~vi  103 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADV-TLVVDPAKEEESSIIERIRSAIGDLPNVTI  103 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSE-EEECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcE-EEeccccccccchhhhhhhcccccCCceee
Confidence            456899998 5999999999888899999999987654211 1122222 222232  2333333333     3589999


Q ss_pred             Ecccc
Q 029125          127 SCVGG  131 (198)
Q Consensus       127 ~~ag~  131 (198)
                      .++|.
T Consensus       104 d~~g~  108 (170)
T d1e3ja2         104 DCSGN  108 (170)
T ss_dssp             ECSCC
T ss_pred             ecCCC
Confidence            99985

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.22  E-value=3e-05  Score=54.83  Aligned_cols=37  Identities=24%  Similarity=0.303  Sum_probs=33.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      +..|||+||+|++|.+.++.....|++|+.+++++++
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k   60 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREA   60 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSST
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHH
Confidence            4579999999999999998888889999999998665

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.19  E-value=0.00022  Score=49.78  Aligned_cols=36  Identities=14%  Similarity=0.317  Sum_probs=32.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      |++|.+.|- |.+|..+++.|+++|++|.+.+|++.+
T Consensus         1 M~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~   36 (162)
T d3cuma2           1 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSA   36 (162)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CCEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhh
Confidence            678999985 999999999999999999999997543

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.18  E-value=6.2e-05  Score=53.96  Aligned_cols=34  Identities=21%  Similarity=0.473  Sum_probs=28.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEee
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG-LTVASLS   87 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~   87 (198)
                      .++.+|.|.||||++|+.+++.|.++. .++..+.
T Consensus         3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            356789999999999999999999985 4666554

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.11  E-value=0.00017  Score=50.55  Aligned_cols=75  Identities=20%  Similarity=0.238  Sum_probs=50.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCC-CHHHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLL-SSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~-d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ..+.+|+|.|+ |.+|...++.+...|.+|+++++++.+... ...... .++  |.. +.+..+...++.|.+|.+.+.
T Consensus        26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~-~~i--~~~~~~~~~~~~~~~~d~vi~~~~~  101 (168)
T d1piwa2          26 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGAD-HYI--ATLEEGDWGEKYFDTFDLIVVCASS  101 (168)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCS-EEE--EGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred             CCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCCc-EEe--eccchHHHHHhhhcccceEEEEecC
Confidence            35679999997 999999888777889999999998665221 111111 233  222 233344555678999998775


Q ss_pred             C
Q 029125          132 F  132 (198)
Q Consensus       132 ~  132 (198)
                      .
T Consensus       102 ~  102 (168)
T d1piwa2         102 L  102 (168)
T ss_dssp             S
T ss_pred             C
Confidence            3

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.07  E-value=0.0018  Score=43.25  Aligned_cols=30  Identities=20%  Similarity=0.258  Sum_probs=26.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEe
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASL   86 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l   86 (198)
                      ++|.|.|++|-.|+.+.+.+.++|+++.+-
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~   30 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK   30 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence            579999999999999999998999887654

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.07  E-value=0.00017  Score=50.37  Aligned_cols=35  Identities=20%  Similarity=0.385  Sum_probs=31.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      |+|.|.|- |.+|..+++.|+++|++|++.+|++++
T Consensus         1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~   35 (161)
T d1vpda2           1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEA   35 (161)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcch
Confidence            57999986 999999999999999999999998654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.04  E-value=0.00076  Score=48.26  Aligned_cols=69  Identities=14%  Similarity=0.190  Sum_probs=48.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc-------------cccCCCCeEEEEccCCCHHHHHHHhc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-------------RDSWANNVIWHQGNLLSSDSWKEALD  120 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~-------------~~~~~~~~~~~~~D~~d~~~~~~~~~  120 (198)
                      ..|++|.|.|| |.-|.+++..|.+.|++|.+.+|+++...             ....+.++.+ .      .++.++++
T Consensus         5 ~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~-t------~~l~~a~~   76 (189)
T d1n1ea2           5 LYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITF-T------SDVEKAYN   76 (189)
T ss_dssp             CCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEE-E------SCHHHHHT
T ss_pred             ceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccccccccc-c------hhhhhccC
Confidence            35678999997 99999999999999999999998753210             0111223332 2      23677788


Q ss_pred             CCCEEEEccc
Q 029125          121 GVTAVISCVG  130 (198)
Q Consensus       121 ~~d~vi~~ag  130 (198)
                      +.|+||.+..
T Consensus        77 ~ad~iiiavP   86 (189)
T d1n1ea2          77 GAEIILFVIP   86 (189)
T ss_dssp             TCSCEEECSC
T ss_pred             CCCEEEEcCc
Confidence            8999888653

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.02  E-value=9e-05  Score=53.10  Aligned_cols=75  Identities=20%  Similarity=0.154  Sum_probs=45.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEe-ecCCCCccccc-CCCCeEEEEccCCCH---HHHHHHh-cCCCEEEEc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASL-SRSGRSSLRDS-WANNVIWHQGNLLSS---DSWKEAL-DGVTAVISC  128 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l-~r~~~~~~~~~-~~~~~~~~~~D~~d~---~~~~~~~-~~~d~vi~~  128 (198)
                      ....|+|+||+|.+|...++.+...|.++++. +.+.++..... ....-.++  |..++   +.+.++. +++|+||.+
T Consensus        30 ~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~vi--~~~~~~~~~~~~~~~~~GvDvv~D~  107 (187)
T d1vj1a2          30 SNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAV--NYKTGNVAEQLREACPGGVDVYFDN  107 (187)
T ss_dssp             SCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEEE--ETTSSCHHHHHHHHCTTCEEEEEES
T ss_pred             CCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEEe--eccchhHHHHHHHHhccCceEEEec
Confidence            34689999999999999999888899865554 44332211111 11222333  44432   2233332 369999999


Q ss_pred             ccc
Q 029125          129 VGG  131 (198)
Q Consensus       129 ag~  131 (198)
                      .|.
T Consensus       108 vGg  110 (187)
T d1vj1a2         108 VGG  110 (187)
T ss_dssp             SCH
T ss_pred             CCc
Confidence            873

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.96  E-value=0.00098  Score=43.66  Aligned_cols=36  Identities=28%  Similarity=0.558  Sum_probs=32.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      .+++++|.|| |++|..++..|.+.|.+|+++.|...
T Consensus        21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            3579999998 99999999999999999999998754

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.94  E-value=0.00086  Score=46.93  Aligned_cols=37  Identities=16%  Similarity=0.320  Sum_probs=32.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS   92 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~   92 (198)
                      ++++|+|.|+ |+.+++++..|.+.|. +|.++.|+.++
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~k   53 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKT   53 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHH
Confidence            4678999997 9999999999999996 89999998654

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.93  E-value=0.002  Score=45.64  Aligned_cols=63  Identities=25%  Similarity=0.299  Sum_probs=48.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ..+++|.|.|. |.||+.+++.+..-|.+|+..+|.+......              -.++++++++..|+|+.+...
T Consensus        40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~~~~--------------~~~~l~ell~~sDiv~~~~pl  102 (181)
T d1qp8a1          40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEGPWR--------------FTNSLEEALREARAAVCALPL  102 (181)
T ss_dssp             CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCSSSC--------------CBSCSHHHHTTCSEEEECCCC
T ss_pred             ccCceEEEecc-ccccccceeeeecccccccccccccccccee--------------eeechhhhhhccchhhccccc
Confidence            56899999997 9999999999999999999999875432110              012367888999999887653

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.92  E-value=0.00086  Score=44.40  Aligned_cols=36  Identities=31%  Similarity=0.642  Sum_probs=32.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      ..++|+|.|| |++|..++..|.++|.+|+++.+.+.
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            4579999998 99999999999999999999998754

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.90  E-value=0.001  Score=44.04  Aligned_cols=36  Identities=19%  Similarity=0.415  Sum_probs=32.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      +.++|+|.|| |++|..++..|.+.|.+|+++.+.+.
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence            4679999997 99999999999999999999988643

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=96.89  E-value=0.00082  Score=49.21  Aligned_cols=37  Identities=24%  Similarity=0.377  Sum_probs=33.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      +.+.++|+|+|| |..|...+..|.++|++|.+++|+.
T Consensus         3 ~~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           3 MHSQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            345679999998 9999999999999999999999864

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.87  E-value=0.00042  Score=48.47  Aligned_cols=35  Identities=20%  Similarity=0.445  Sum_probs=27.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHC-CCeEEEe-ecC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDR-GLTVASL-SRS   89 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l-~r~   89 (198)
                      ...+|+|.|++|-.|+.+++.+.+. +.+++.. +|.
T Consensus         3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~   39 (162)
T d1diha1           3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALERE   39 (162)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecc
Confidence            4568999999999999999999886 5565443 443

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.86  E-value=0.00079  Score=46.23  Aligned_cols=65  Identities=22%  Similarity=0.198  Sum_probs=44.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      |||.|.|. |.+|+.+++.|+++|++|++.++++.+..... ..+..+.  +     ...+++++.|+||.+.-
T Consensus         1 MkIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~-~~~~~~~--~-----~~~e~~~~~diIi~~v~   65 (152)
T d1i36a2           1 LRVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIER-ARTVGVT--E-----TSEEDVYSCPVVISAVT   65 (152)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH-HHHHTCE--E-----CCHHHHHTSSEEEECSC
T ss_pred             CEEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh-hhccccc--c-----cHHHHHhhcCeEEEEec
Confidence            57999985 99999999999999999999887765422111 0111111  1     12456778898888764

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.84  E-value=0.0011  Score=46.39  Aligned_cols=76  Identities=21%  Similarity=0.250  Sum_probs=57.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcc--cccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      ++-+|+|.|+ |-.|..-++....-|.+|.++|.+.....  +......++..   ..+.+.+.+.+++.|+||.++-..
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~---~~~~~~l~~~~~~aDivI~aalip  106 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGAVLVP  106 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEECCCCT
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceee---hhhhhhHHHhhccCcEEEEeeecC
Confidence            4569999998 99999999999999999999999865421  11122334443   355888999999999999988654


Q ss_pred             CC
Q 029125          133 GS  134 (198)
Q Consensus       133 ~~  134 (198)
                      +.
T Consensus       107 G~  108 (168)
T d1pjca1         107 GR  108 (168)
T ss_dssp             TS
T ss_pred             Cc
Confidence            43

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.83  E-value=0.00093  Score=43.93  Aligned_cols=35  Identities=20%  Similarity=0.420  Sum_probs=32.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      +++|+|.|| |++|..++..|.+.|.+|+++.|...
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            579999998 99999999999999999999998643

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.82  E-value=0.00047  Score=48.67  Aligned_cols=36  Identities=17%  Similarity=0.377  Sum_probs=32.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      ..+|.++|- |.+|..+++.|++.|++|++.+|++++
T Consensus         2 ~~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~   37 (176)
T d2pgda2           2 QADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSK   37 (176)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHH
T ss_pred             CCcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            357999996 999999999999999999999998754

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.82  E-value=0.001  Score=44.01  Aligned_cols=36  Identities=19%  Similarity=0.346  Sum_probs=32.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      .+++++|.|| |++|..++..|.+.|.+|+++.+.+.
T Consensus        22 ~p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          22 IPKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            3579999998 99999999999999999999998654

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.81  E-value=0.00016  Score=50.01  Aligned_cols=66  Identities=18%  Similarity=0.119  Sum_probs=44.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      |+|.+.|+ |.+|+++++.|++.|++|++.+|+.++..+.....++.+.    .   +..+++++.|+||-+.-
T Consensus         1 MkIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~----~---~~~~~~~~~dvIilavk   66 (152)
T d2ahra2           1 MKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYA----M---SHQDLIDQVDLVILGIK   66 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBC----S---SHHHHHHTCSEEEECSC
T ss_pred             CEEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeee----c---hhhhhhhccceeeeecc
Confidence            57899986 9999999999999999999999875442211000111111    1   23455667888887663

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.80  E-value=0.0011  Score=43.43  Aligned_cols=35  Identities=17%  Similarity=0.308  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      +++|+|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            478999998 99999999999999999999998753

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.79  E-value=0.00092  Score=46.60  Aligned_cols=76  Identities=18%  Similarity=0.233  Sum_probs=48.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCccc-ccCCCCeEEEEccCCCH-HHHHHHh--cCCCEEEEcc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLR-DSWANNVIWHQGNLLSS-DSWKEAL--DGVTAVISCV  129 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~-~~~~~~~--~~~d~vi~~a  129 (198)
                      .+.+|+|+|++|.+|...+..+...| .+|++.++++.+... ...... .++..+-.|. +.+.+..  +++|++|.+.
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~-~~i~~~~~~~~~~~~~~~~~~~~d~vid~~  105 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD-YVINASMQDPLAEIRRITESKGVDAVIDLN  105 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCS-EEEETTTSCHHHHHHHHTTTSCEEEEEESC
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCc-eeeccCCcCHHHHHHHHhhcccchhhhccc
Confidence            45789999999999999999888888 588888877544211 111111 3333232222 2233332  2589999998


Q ss_pred             cc
Q 029125          130 GG  131 (198)
Q Consensus       130 g~  131 (198)
                      |.
T Consensus       106 g~  107 (170)
T d1jvba2         106 NS  107 (170)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=96.78  E-value=0.0016  Score=46.11  Aligned_cols=39  Identities=26%  Similarity=0.381  Sum_probs=34.7

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      ...++|+|+|+|| |..|...+..|.++|++|+++.+.+.
T Consensus        39 ~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          39 PAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            4456789999998 99999999999999999999998753

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.76  E-value=0.0068  Score=41.56  Aligned_cols=25  Identities=24%  Similarity=0.413  Sum_probs=22.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGL   81 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~   81 (198)
                      -+|.|.||||++|+.|++.|.++.+
T Consensus         2 ~kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           2 YTVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHcCCC
Confidence            3799999999999999999988753

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.75  E-value=0.0013  Score=43.20  Aligned_cols=36  Identities=25%  Similarity=0.310  Sum_probs=32.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      .+++++|.|| |+||..++..|.+.|.+|+++.+...
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            4579999998 99999999999999999999998754

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.72  E-value=0.00072  Score=47.17  Aligned_cols=35  Identities=17%  Similarity=0.433  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGR   91 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~~~   91 (198)
                      |++|+|+|. |.+|..+++.|.+.|+  +|++.+++++
T Consensus         1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~   37 (171)
T d2g5ca2           1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPE   37 (171)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChH
Confidence            678999986 9999999999999985  7888888653

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.71  E-value=0.0014  Score=42.77  Aligned_cols=36  Identities=25%  Similarity=0.470  Sum_probs=32.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      .+++++|.|| |++|..++..|.+.|.+|+++.+.+.
T Consensus        20 ~p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          20 LPQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            3478999997 99999999999999999999988643

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.70  E-value=0.0014  Score=43.44  Aligned_cols=35  Identities=11%  Similarity=0.326  Sum_probs=32.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      +++++|.|| |++|..++..|.+.|.+|+++.|...
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            479999998 99999999999999999999999753

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=96.67  E-value=0.0015  Score=48.09  Aligned_cols=37  Identities=27%  Similarity=0.478  Sum_probs=33.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      ++.+||+|+|| |..|..++..|.++|++|+++.|++.
T Consensus         2 ~~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           2 PTTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            35679999998 99999999999999999999998643

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.67  E-value=0.0015  Score=45.79  Aligned_cols=101  Identities=15%  Similarity=0.138  Sum_probs=62.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc--cc--CCCCeEEEEccCCCHHHHHHHhcCCCEEEEc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DS--WANNVIWHQGNLLSSDSWKEALDGVTAVISC  128 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~--~~--~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~  128 (198)
                      ..++++|+|.|+ |+.+++++..|.+.+.+|+++.|+.++...  ..  ...++.....|-.       .+..+|+||++
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~-------~~~~~diiIN~   86 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI-------PLQTYDLVINA   86 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC-------CCSCCSEEEEC
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc-------cccccceeeec
Confidence            346789999997 889999999999988899999998654211  00  1123444443321       24578999999


Q ss_pred             cccCC--C-----------CccceehhhHHH--HHHHHHHHHcCCCEE
Q 029125          129 VGGFG--S-----------NSYMYKINGTAN--INAIRAASEKGVKRF  161 (198)
Q Consensus       129 ag~~~--~-----------~~~~~~~n~~~~--~~~~~a~~~~~~~~~  161 (198)
                      .....  .           ....+++.+...  ..+++.+++.|.+.+
T Consensus        87 tp~g~~~~~~~~~~~~~~~~~~~~D~vy~~p~~T~~l~~A~~~g~~~v  134 (171)
T d1p77a1          87 TSAGLSGGTASVDAEILKLGSAFYDMQYAKGTDTPFIALCKSLGLTNV  134 (171)
T ss_dssp             CCC-------CCCHHHHHHCSCEEESCCCTTSCCHHHHHHHHTTCCCE
T ss_pred             ccccccccccchhhhhhcccceeeeeeccCcccHHHHHHHHHcCCCcc
Confidence            75321  0           122345554321  256778887776544

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.67  E-value=0.0026  Score=43.98  Aligned_cols=72  Identities=17%  Similarity=0.169  Sum_probs=45.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-ccCCCCeEEEEccCCCH---HHHHHHhcCCCEEEEccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-DSWANNVIWHQGNLLSS---DSWKEALDGVTAVISCVG  130 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~---~~~~~~~~~~d~vi~~ag  130 (198)
                      .+.+|+|.|+ |.+|...+..+...|++|+++++++.+... .... ...++  |..+.   +.+.+...+.+.+|-+.+
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~G-a~~~i--~~~~~~~~~~~~~~~~g~~~~i~~~~  102 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLG-ASLTV--NARQEDPVEAIQRDIGGAHGVLVTAV  102 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-CSEEE--ETTTSCHHHHHHHHHSSEEEEEECCS
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccC-ccccc--cccchhHHHHHHHhhcCCcccccccc
Confidence            4678999886 999999998888889999999987654211 1111 12333  33333   333344445665555554

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.65  E-value=0.00085  Score=47.27  Aligned_cols=73  Identities=22%  Similarity=0.191  Sum_probs=48.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccc-ccCCCCeEEEEccCCC---HHHHHHHhc--CCCEEEE
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR-DSWANNVIWHQGNLLS---SDSWKEALD--GVTAVIS  127 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~-~~~~~~~~~~~~D~~d---~~~~~~~~~--~~d~vi~  127 (198)
                      .+.+|+|.|+ |.+|...++.+...|+ +|+++++++.+... .... -..++  |..+   .+.+.+...  ++|+||.
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lG-a~~~i--~~~~~~~~~~v~~~t~g~G~D~vid  102 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYG-ATDIL--NYKNGHIEDQVMKLTNGKGVDRVIM  102 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHT-CSEEE--CGGGSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhC-ccccc--cccchhHHHHHHHHhhccCcceEEE
Confidence            4668999986 9999998888888896 79999887544221 1111 12333  3333   334444443  5899999


Q ss_pred             cccc
Q 029125          128 CVGG  131 (198)
Q Consensus       128 ~ag~  131 (198)
                      ++|.
T Consensus       103 ~~g~  106 (174)
T d1jqba2         103 AGGG  106 (174)
T ss_dssp             CSSC
T ss_pred             ccCC
Confidence            9985

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.62  E-value=0.007  Score=42.36  Aligned_cols=77  Identities=18%  Similarity=0.206  Sum_probs=48.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcccccCCCCeEEEEccCCC--HHHHHHHh--cCCCEEEEc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLS--SDSWKEAL--DGVTAVISC  128 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~--~~~d~vi~~  128 (198)
                      ..+.+|+|+|+ |.+|...+..+...|. +|++.++++.+...........++...-.|  .+.+....  .++|++|.+
T Consensus        27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~  105 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDC  105 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEe
Confidence            45679999986 9999999999999997 677888776542211111222333222222  22233322  379999999


Q ss_pred             ccc
Q 029125          129 VGG  131 (198)
Q Consensus       129 ag~  131 (198)
                      .|.
T Consensus       106 ~G~  108 (174)
T d1e3ia2         106 AGT  108 (174)
T ss_dssp             SCC
T ss_pred             ccc
Confidence            985

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.61  E-value=0.002  Score=42.59  Aligned_cols=34  Identities=29%  Similarity=0.340  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRS   89 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~   89 (198)
                      .+++++|.|| |+||..++..|.+.|.+|+++.|+
T Consensus        19 ~P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            4568999998 999999999999999999999875

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.61  E-value=0.0015  Score=43.12  Aligned_cols=34  Identities=26%  Similarity=0.620  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      .++++|.|| |++|..++..|.+.|.+|+++.|.+
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            478999998 9999999999999999999998764

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.59  E-value=0.00087  Score=47.44  Aligned_cols=37  Identities=24%  Similarity=0.311  Sum_probs=33.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      +..|+|+||+|++|...++.....|++|+++++++++
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k   68 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhH
Confidence            4589999999999999999999999999999997655

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=96.52  E-value=0.0024  Score=42.81  Aligned_cols=36  Identities=28%  Similarity=0.673  Sum_probs=32.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      ..++|+|.|| |++|..++..|.+.|.+|.++.+.+.
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            4689999998 99999999999999999999998754

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.50  E-value=0.00086  Score=47.14  Aligned_cols=74  Identities=19%  Similarity=0.201  Sum_probs=45.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeE-EEeecCCCCccc-ccCCCCeEEEEccCCCH---HHHHHHhc-CCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTV-ASLSRSGRSSLR-DSWANNVIWHQGNLLSS---DSWKEALD-GVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V-~~l~r~~~~~~~-~~~~~~~~~~~~D~~d~---~~~~~~~~-~~d~vi~  127 (198)
                      ..+.+|+|.|+ |.+|...+..+...|.++ ++.++++.+... +.. ...+++  |..+.   +.+.++.. ++|+||.
T Consensus        27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~-Ga~~~i--~~~~~~~~~~i~~~t~gg~D~vid  102 (174)
T d1f8fa2          27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL-GATHVI--NSKTQDPVAAIKEITDGGVNFALE  102 (174)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH-TCSEEE--ETTTSCHHHHHHHHTTSCEEEEEE
T ss_pred             CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHc-CCeEEE--eCCCcCHHHHHHHHcCCCCcEEEE
Confidence            45678999997 999999998888888755 555655433111 111 122444  34333   22333332 5899999


Q ss_pred             cccc
Q 029125          128 CVGG  131 (198)
Q Consensus       128 ~ag~  131 (198)
                      +.|.
T Consensus       103 ~~G~  106 (174)
T d1f8fa2         103 STGS  106 (174)
T ss_dssp             CSCC
T ss_pred             cCCc
Confidence            9885

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.44  E-value=0.0023  Score=45.85  Aligned_cols=68  Identities=19%  Similarity=0.153  Sum_probs=48.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ...+++|.|.|. |.||+.+++.|..-|.+|...++.........  .+       +...+++.++++..|+|+.+..
T Consensus        46 eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~--~~-------~~~~~~l~~ll~~sD~i~~~~p  113 (193)
T d1mx3a1          46 RIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVERA--LG-------LQRVSTLQDLLFHSDCVTLHCG  113 (193)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHH--HT-------CEECSSHHHHHHHCSEEEECCC
T ss_pred             eeeCceEEEecc-ccccccceeeeeccccceeeccCcccccchhh--hc-------cccccchhhccccCCEEEEeec
Confidence            357889999996 99999999999999999999998654422110  01       1112246677778888776654

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.38  E-value=0.0018  Score=46.64  Aligned_cols=65  Identities=15%  Similarity=0.147  Sum_probs=47.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ..+++|.|.|- |.||+.+++.|..-|.+|++.++........   ..        ...+++.++++..|+|+.+..
T Consensus        41 l~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~---~~--------~~~~~l~~~l~~sDii~~~~p  105 (197)
T d1j4aa1          41 VRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELEK---KG--------YYVDSLDDLYKQADVISLHVP  105 (197)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHHH---TT--------CBCSCHHHHHHHCSEEEECSC
T ss_pred             ccCCeEEEecc-cccchhHHHhHhhhcccccccCccccccccc---ce--------eeeccccccccccccccccCC
Confidence            45789999996 9999999999999999999998764432111   11        112346777888898877654

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.37  E-value=0.0025  Score=44.43  Aligned_cols=76  Identities=16%  Similarity=0.064  Sum_probs=46.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEcccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGG  131 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~  131 (198)
                      .+.+|+|.|+ |.+|...+..+...|. +|++.++++.+...........++..+-.+.+.+.+...  ++|++|.+.|.
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g~  110 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGS  110 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSCC
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCcccHHHHHHHhhCCCCceEEEEecCc
Confidence            4568999886 9999998888887775 667777765432111111223444332222333333332  58999999985

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.37  E-value=0.0021  Score=45.23  Aligned_cols=35  Identities=17%  Similarity=0.217  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGR   91 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~   91 (198)
                      ++||+|+|| |..|...+..|.++|+ +|+++.|...
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            579999998 9999999999999998 5999998753

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=96.35  E-value=0.0018  Score=42.80  Aligned_cols=37  Identities=22%  Similarity=0.317  Sum_probs=33.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      .+++++|.|| |++|..++..|.+.|.+|+++.|.+..
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            3579999998 999999999999999999999987543

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.34  E-value=0.0055  Score=40.85  Aligned_cols=88  Identities=18%  Similarity=0.180  Sum_probs=58.8

Q ss_pred             CCCCeEEEEcCC---chhHHHHHHHHHHCC-CeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           54 PPSEKLLVLGGN---GFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        54 ~~~~~vlvtGat---G~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      ...++|.|.|++   +..|..+.+.|.+.| .+|+.+..+... .     .++.++ -++.      ++-..+|.++-+.
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~-i-----~G~~~y-~sl~------dlp~~vDlvvi~v   72 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEE-V-----QGVKAY-KSVK------DIPDEIDLAIIVV   72 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSE-E-----TTEECB-SSTT------SCSSCCSEEEECS
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccc-c-----CCeEee-cchh------hcCCCCceEEEec
Confidence            356899999998   899999999988766 689888654321 1     122221 1222      2223688888765


Q ss_pred             ccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          130 GGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       130 g~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      ..            ..+..+++.+.+.|++.++++|+
T Consensus        73 p~------------~~~~~~~~~~~~~g~~~~vi~s~   97 (129)
T d2csua1          73 PK------------RFVKDTLIQCGEKGVKGVVIITA   97 (129)
T ss_dssp             CH------------HHHHHHHHHHHHHTCCEEEECCC
T ss_pred             Ch------------HHhHHHHHHHHHcCCCEEEEecc
Confidence            43            33446778888889988888876

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.34  E-value=0.0073  Score=42.18  Aligned_cols=77  Identities=14%  Similarity=0.081  Sum_probs=48.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcccccCCCCeEEEEccCCC--HHHHHHHh--cCCCEEEEc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLS--SDSWKEAL--DGVTAVISC  128 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~--~~~d~vi~~  128 (198)
                      ..+.+|+|.|+ |++|...++.+...|. +|++.++++.+...........++...-.|  .+.+....  .++|++|-+
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid~  104 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVEC  104 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEEc
Confidence            45678999996 9999999999998885 788998876552221111222333211122  22233333  368999999


Q ss_pred             ccc
Q 029125          129 VGG  131 (198)
Q Consensus       129 ag~  131 (198)
                      .|.
T Consensus       105 ~g~  107 (174)
T d1p0fa2         105 AGR  107 (174)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            875

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.33  E-value=0.0041  Score=43.39  Aligned_cols=77  Identities=12%  Similarity=0.092  Sum_probs=48.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCcccccCCCCeEEE-EccCCC-HHHHHHHh--cCCCEEEEc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWH-QGNLLS-SDSWKEAL--DGVTAVISC  128 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~-~~D~~d-~~~~~~~~--~~~d~vi~~  128 (198)
                      ..+.+|+|.|+ |++|...+..+...| .+|++.++++.+............+ ..|-.+ .+......  .++|++|.+
T Consensus        27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~  105 (176)
T d2jhfa2          27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEV  105 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred             CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEec
Confidence            45678999999 779999999999988 5888888876653221111112222 122222 22222222  379999999


Q ss_pred             ccc
Q 029125          129 VGG  131 (198)
Q Consensus       129 ag~  131 (198)
                      .|.
T Consensus       106 ~G~  108 (176)
T d2jhfa2         106 IGR  108 (176)
T ss_dssp             SCC
T ss_pred             CCc
Confidence            885

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.31  E-value=0.0026  Score=45.47  Aligned_cols=35  Identities=29%  Similarity=0.523  Sum_probs=32.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      -++|.|.|| |.+|..++..++..|++|++.+++++
T Consensus         4 IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~   38 (192)
T d1f0ya2           4 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTED   38 (192)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             eEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChH
Confidence            479999998 99999999999999999999998764

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.29  E-value=0.0029  Score=38.40  Aligned_cols=52  Identities=13%  Similarity=0.160  Sum_probs=39.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLS  111 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d  111 (198)
                      +|+|.|.|+ |-+|+.++..-.+-|++|.+++-+++....   .....++..++.+
T Consensus         1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~pa~---~~a~dvIT~e~E~   52 (78)
T d3etja2           1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEPAAV---PFQQSVITAEIER   52 (78)
T ss_dssp             CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCGGGS---CGGGSEEEESSSC
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCCccc---ccccceEEEeecc
Confidence            578999997 999999999999999999999976544221   1233566666654

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=96.27  E-value=0.0044  Score=40.44  Aligned_cols=36  Identities=19%  Similarity=0.216  Sum_probs=32.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      ++++|+|.|| |++|..++..|.+.|.+|.++.|.+.
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            4689999997 99999999999999999999998753

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.27  E-value=0.002  Score=45.00  Aligned_cols=76  Identities=16%  Similarity=0.199  Sum_probs=44.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCccc-ccCCCCeEEEEcc-C-CCHHHHHHHh--cCCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR-DSWANNVIWHQGN-L-LSSDSWKEAL--DGVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~-~~~~~~~~~~~~D-~-~d~~~~~~~~--~~~d~vi~  127 (198)
                      ..+.+|+|.|+ |++|...++.+...|. .|++.++++.+... .... .-.++..+ - .+........  .++|++|.
T Consensus        27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lG-a~~~i~~~~~~~~~~~~~~~~~~~g~D~vid  104 (176)
T d2fzwa2          27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFG-ATECINPQDFSKPIQEVLIEMTDGGVDYSFE  104 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHT-CSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred             CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhC-CcEEEeCCchhhHHHHHHHHHcCCCCcEeee
Confidence            35678999998 6899999988888885 56666665544211 1111 12233211 1 1122222222  36999999


Q ss_pred             cccc
Q 029125          128 CVGG  131 (198)
Q Consensus       128 ~ag~  131 (198)
                      +.|.
T Consensus       105 ~~G~  108 (176)
T d2fzwa2         105 CIGN  108 (176)
T ss_dssp             CSCC
T ss_pred             cCCC
Confidence            9885

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.26  E-value=0.0066  Score=42.53  Aligned_cols=76  Identities=12%  Similarity=0.112  Sum_probs=49.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCCccc-ccCCCCeEEEE-ccCCC-HHHHHHHh--cCCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLR-DSWANNVIWHQ-GNLLS-SDSWKEAL--DGVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~~~~-~~~~~~~~~~~-~D~~d-~~~~~~~~--~~~d~vi~  127 (198)
                      ..+.+|+|+|+ |++|...+..+...| .+|+++++++++... ...... .++. -|-.+ .+.+.+..  .++|++|.
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~-~~in~~~~~~~~~~~~~~~~g~G~d~vi~  105 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGAT-ECISPKDSTKPISEVLSEMTGNNVGYTFE  105 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCS-EEECGGGCSSCHHHHHHHHHTSCCCEEEE
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCc-EEECccccchHHHHHHHHhccccceEEEE
Confidence            45678999986 999999999999999 589999988765221 212222 2221 22221 23334433  37999999


Q ss_pred             cccc
Q 029125          128 CVGG  131 (198)
Q Consensus       128 ~ag~  131 (198)
                      +.|.
T Consensus       106 ~~g~  109 (176)
T d1d1ta2         106 VIGH  109 (176)
T ss_dssp             CSCC
T ss_pred             eCCc
Confidence            9885

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=96.24  E-value=0.0029  Score=41.94  Aligned_cols=36  Identities=22%  Similarity=0.357  Sum_probs=32.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      .+++++|.|| |+||..++..|.+.|.+|+++.+.+.
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            3579999998 99999999999999999999998753

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=96.24  E-value=0.0028  Score=46.87  Aligned_cols=34  Identities=24%  Similarity=0.427  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      .|||+|+|| |.-|...+.+|.++|++|.++.++.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            478999998 9999999999999999999998764

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=96.22  E-value=0.0028  Score=47.70  Aligned_cols=38  Identities=18%  Similarity=0.318  Sum_probs=33.5

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      ...++|+|+|+|| |..|...+..|.++|++|.++.++.
T Consensus        26 ~~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          26 ATSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CCSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3446789999998 9999999999999999999998764

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.018  Score=40.14  Aligned_cols=57  Identities=18%  Similarity=0.239  Sum_probs=45.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ...+|+|+|.|.+.-+|+-++..|.++|+.|+.+......                      +.+..++.|++|..+|.
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~----------------------l~~~~~~aDivi~a~G~   92 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAH----------------------LDEEVNKGDILVVATGQ   92 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS----------------------HHHHHTTCSEEEECCCC
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEeccccc----------------------HHHHHhhccchhhcccc
Confidence            4678999999999999999999999999999988764322                      23445567777777764

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.20  E-value=0.0079  Score=41.80  Aligned_cols=57  Identities=21%  Similarity=0.302  Sum_probs=44.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ...+|+|+|.|.+.-+|+-++..|.++|+.|+++......                      +.+..++.|+||..+|.
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~----------------------l~~~~~~ADivI~a~G~   90 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKN----------------------LRHHVENADLLIVAVGK   90 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSC----------------------HHHHHHHCSEEEECSCC
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccch----------------------hHHHHhhhhHhhhhccC
Confidence            4678999999999999999999999999999888653211                      33445667888887774

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=96.19  E-value=0.0027  Score=47.15  Aligned_cols=32  Identities=25%  Similarity=0.405  Sum_probs=29.7

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      .|+|+|| |..|..++.+|+++|.+|++++++.
T Consensus         6 DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            4999998 9999999999999999999999864

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.17  E-value=0.0034  Score=48.17  Aligned_cols=36  Identities=31%  Similarity=0.605  Sum_probs=32.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      ++|+|+|+|| |.-|...+..|.++|++|.++.++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            3689999998 99999999999999999999988753

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=96.17  E-value=0.049  Score=35.50  Aligned_cols=91  Identities=19%  Similarity=0.208  Sum_probs=60.3

Q ss_pred             CCCeEEEEcCCc----------hhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CC
Q 029125           55 PSEKLLVLGGNG----------FVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GV  122 (198)
Q Consensus        55 ~~~~vlvtGatG----------~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~  122 (198)
                      ..++|+|.|+..          +-+.+.++.|.+.|++++++.-++..-.. . ..-..-+.......+.+.++++  ++
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVst-d-~d~aD~lYfeplt~e~v~~Ii~~E~p   80 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVST-D-YDTSDRLYFEPVTLEDVLEIVRIEKP   80 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTT-S-TTSSSEEECCCCSHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhc-C-hhhcCceEEccCCHHHHHHHHHHhCC
Confidence            467999999843          66778999999999999999877644211 1 1122334445556777887664  79


Q ss_pred             CEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCC
Q 029125          123 TAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVK  159 (198)
Q Consensus       123 d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~  159 (198)
                      |.|+-..|.            +..+++.....+.|++
T Consensus        81 ~~ii~~~GG------------Qtalnla~~L~~~gv~  105 (121)
T d1a9xa4          81 KGVIVQYGG------------QTPLKLARALEAAGVP  105 (121)
T ss_dssp             SEEECSSST------------HHHHTTHHHHHHTTCC
T ss_pred             CEEEeehhh------------hhHHHHHHHHHHcCCc
Confidence            988876663            2334555556666653

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.15  E-value=0.013  Score=40.88  Aligned_cols=80  Identities=19%  Similarity=0.092  Sum_probs=54.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccC---CCCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSW---ANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      ...+|+|+|.|-+.-+|+-++..|+++|..|+.+............   ......-......++.+.+....+|+||...
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsav  105 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGV  105 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEEcc
Confidence            5678999999999999999999999999999877654222111000   0011111111134677888888899999988


Q ss_pred             ccC
Q 029125          130 GGF  132 (198)
Q Consensus       130 g~~  132 (198)
                      |..
T Consensus       106 G~p  108 (171)
T d1edza1         106 PSE  108 (171)
T ss_dssp             CCT
T ss_pred             CCC
Confidence            753

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.14  E-value=0.0031  Score=42.99  Aligned_cols=36  Identities=22%  Similarity=0.385  Sum_probs=32.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRS   89 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~   89 (198)
                      ..++++|+|+|| |.+|..-++.|++.|.+|++++..
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            467899999998 999999999999999999999654

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.05  E-value=0.011  Score=41.93  Aligned_cols=66  Identities=21%  Similarity=0.194  Sum_probs=48.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF  132 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~  132 (198)
                      ...++|.|.|- |.||+.+++.+..-|.+|+..++.......     ..  ..     .+.++++++..|+|+.+....
T Consensus        42 l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~-----~~--~~-----~~~l~ell~~sDii~i~~plt  107 (188)
T d1sc6a1          42 ARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPLG-----NA--TQ-----VQHLSDLLNMSDVVSLHVPEN  107 (188)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCCT-----TC--EE-----CSCHHHHHHHCSEEEECCCSS
T ss_pred             ccceEEEEeec-ccchhhhhhhcccccceEeeccccccchhh-----hh--hh-----hhhHHHHHhhccceeecccCC
Confidence            46789999985 999999999999999999999986443211     11  11     124667788899888776543

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.04  E-value=0.0061  Score=43.70  Aligned_cols=64  Identities=13%  Similarity=0.045  Sum_probs=47.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ..+++|.|.|. |.||+.+++.|..-|.+|++.++.......    ..+.        ..+++++++..|+|+.+.-
T Consensus        43 l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~----~~~~--------~~~l~~l~~~~D~v~~~~p  106 (199)
T d1dxya1          43 LGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGDH----PDFD--------YVSLEDLFKQSDVIDLHVP  106 (199)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSCC----TTCE--------ECCHHHHHHHCSEEEECCC
T ss_pred             ccceeeeeeec-ccccccccccccccceeeeccCCccchhhh----cchh--------HHHHHHHHHhcccceeeec
Confidence            45789999996 999999999999999999999986544221    1111        1235677778888877654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.03  E-value=0.0043  Score=42.73  Aligned_cols=73  Identities=22%  Similarity=0.180  Sum_probs=44.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCC---HHHHHHHhcCCCEEEEccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLS---SDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d---~~~~~~~~~~~d~vi~~ag  130 (198)
                      .+.+|+|.|+ |.+|...+..+...|++|++.++++.+..... .-+...+. |..+   .+.+.+..++.+.+|.+++
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k-~~Ga~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~  102 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADLVV-NPLKEDAAKFMKEKVGGVHAAVVTAV  102 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSEEE-CTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhh-hcCcceec-ccccchhhhhcccccCCCceEEeecC
Confidence            4568999875 99999998888889999999998765421111 11222222 2222   2334455556666666654

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=96.00  E-value=0.01  Score=42.18  Aligned_cols=69  Identities=14%  Similarity=0.083  Sum_probs=47.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ...++++.|.|. |.||+.+++.+..-|.+|...++.......... ..       ....++++++++..|+|+.+..
T Consensus        44 ~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-~~-------~~~~~~l~~ll~~sD~v~l~~p  112 (191)
T d1gdha1          44 KLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS-YQ-------ATFHDSLDSLLSVSQFFSLNAP  112 (191)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH-HT-------CEECSSHHHHHHHCSEEEECCC
T ss_pred             eecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhc-cc-------ccccCCHHHHHhhCCeEEecCC
Confidence            346789999997 999999999999999999999876543211100 00       0112346777888898876554

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.93  E-value=0.0036  Score=44.41  Aligned_cols=36  Identities=19%  Similarity=0.353  Sum_probs=32.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      +-++|.|.|+ |.+|..++..++..|++|++.+++++
T Consensus         3 ~I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~   38 (186)
T d1wdka3           3 DVKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEH   38 (186)
T ss_dssp             CCSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHH
Confidence            3578999998 99999999999999999999999754

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.91  E-value=0.0036  Score=43.50  Aligned_cols=68  Identities=16%  Similarity=0.111  Sum_probs=47.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ...+|+++|.| .|.+|+.+++.|...|.+|++.+.++.+..+... .+.++.        .+++++...|++|-+.|
T Consensus        21 ~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~-dG~~v~--------~~~~a~~~adivvtaTG   88 (163)
T d1li4a1          21 MIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAAM-EGYEVT--------TMDEACQEGNIFVTTTG   88 (163)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCEEC--------CHHHHTTTCSEEEECSS
T ss_pred             eecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhhc-CceEee--------ehhhhhhhccEEEecCC
Confidence            45689999999 5999999999999999999999988654332211 122221        24455556666666665

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.89  E-value=0.017  Score=38.83  Aligned_cols=86  Identities=15%  Similarity=0.113  Sum_probs=53.1

Q ss_pred             CCCeEEEEcCC---chhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           55 PSEKLLVLGGN---GFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        55 ~~~~vlvtGat---G~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      +.++|+|.|++   +..|..+++.|.+.|++|+.+..+... .     .+..++    .+   +.++-..+|.++-+..+
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~-i-----~G~~~~----~s---l~dlp~~iD~v~i~vp~   84 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEE-V-----LGRKCY----PS---VLDIPDKIEVVDLFVKP   84 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE-E-----TTEECB----SS---GGGCSSCCSEEEECSCH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccc-c-----CCCccc----cc---ccccCccceEEEEEeCH
Confidence            46799999997   789999999999999999888654221 0     111111    11   22223356776665432


Q ss_pred             CCCCccceehhhHHHHHHHHHHHHcCCCEEEEee
Q 029125          132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYIS  165 (198)
Q Consensus       132 ~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~S  165 (198)
                                  .....+++.+.+.|++.+++..
T Consensus        85 ------------~~~~~~~~e~~~~g~k~v~~~~  106 (139)
T d2d59a1          85 ------------KLTMEYVEQAIKKGAKVVWFQY  106 (139)
T ss_dssp             ------------HHHHHHHHHHHHHTCSEEEECT
T ss_pred             ------------HHHHHHHHHHHHhCCCEEEEec
Confidence                        2334556667677776554433

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=95.87  E-value=0.0057  Score=46.94  Aligned_cols=36  Identities=25%  Similarity=0.409  Sum_probs=31.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSG   90 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~   90 (198)
                      +.+|+|+|+|| |.-|..++..|+++|  ++|+++.|+.
T Consensus         2 ~~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           2 PTIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            56889999998 999999999999876  6999999874

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.85  E-value=0.022  Score=37.00  Aligned_cols=82  Identities=18%  Similarity=0.327  Sum_probs=52.0

Q ss_pred             CeEEEEcCC---chhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCC
Q 029125           57 EKLLVLGGN---GFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (198)
Q Consensus        57 ~~vlvtGat---G~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~  133 (198)
                      |+|.|.|++   +..|..+++.|++.|++|+.+..+... .     .++.++       .++.++-..+|.++-+..+  
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~-i-----~G~~~y-------~sl~~lp~~~D~vvi~vp~--   66 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE-I-----EGLKCY-------RSVRELPKDVDVIVFVVPP--   66 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE-E-----TTEECB-------SSGGGSCTTCCEEEECSCH--
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccccc-c-----cCcccc-------ccchhccccceEEEEEeCH--
Confidence            689999987   679999999999999999887643211 0     122221       1122223357877765543  


Q ss_pred             CCccceehhhHHHHHHHHHHHHcCCCEEEE
Q 029125          134 SNSYMYKINGTANINAIRAASEKGVKRFVY  163 (198)
Q Consensus       134 ~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~  163 (198)
                                .....+++.|.+.|++.+++
T Consensus        67 ----------~~~~~~l~~~~~~g~k~v~~   86 (116)
T d1y81a1          67 ----------KVGLQVAKEAVEAGFKKLWF   86 (116)
T ss_dssp             ----------HHHHHHHHHHHHTTCCEEEE
T ss_pred             ----------HHHHHHHHHHHhcCCceEEe
Confidence                      23345677777778876544

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.80  E-value=0.0094  Score=42.10  Aligned_cols=68  Identities=12%  Similarity=0.030  Sum_probs=48.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ...++++.|.|. |.||+.+++.+..-|.+|+..++...+.....  ..+.        ..+++++++..|+|+.+...
T Consensus        41 ~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~--~~~~--------~~~l~ell~~sDiv~~~~Pl  108 (184)
T d1ygya1          41 EIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQ--LGIE--------LLSLDDLLARADFISVHLPK  108 (184)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHHH--HTCE--------ECCHHHHHHHCSEEEECCCC
T ss_pred             cccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHhh--cCce--------eccHHHHHhhCCEEEEcCCC
Confidence            346789999996 99999999999999999999988654422111  1111        12356778889988876643

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.79  E-value=0.013  Score=41.74  Aligned_cols=75  Identities=20%  Similarity=0.150  Sum_probs=47.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcccccCCCCeEEEEccCCCH---HHHHHHhc--CCCEEEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSS---DSWKEALD--GVTAVIS  127 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~~--~~d~vi~  127 (198)
                      ..+.+|+|.|+ |.+|...+..+...|. +|++.++++.+..... .-+...+. |..+.   +.+.++..  ++|++|.
T Consensus        24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-~~Ga~~~~-~~~~~~~~~~i~~~t~g~g~D~vid  100 (195)
T d1kola2          24 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQGFEIAD-LSLDTPLHEQIAALLGEPEVDCAVD  100 (195)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCEEEE-TTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-hccccEEE-eCCCcCHHHHHHHHhCCCCcEEEEE
Confidence            35679999986 9999888887777775 7888888754421111 11233222 33332   33444443  5899999


Q ss_pred             cccc
Q 029125          128 CVGG  131 (198)
Q Consensus       128 ~ag~  131 (198)
                      +.|.
T Consensus       101 ~vG~  104 (195)
T d1kola2         101 AVGF  104 (195)
T ss_dssp             CCCT
T ss_pred             Cccc
Confidence            9884

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=95.79  E-value=0.011  Score=39.11  Aligned_cols=92  Identities=12%  Similarity=0.073  Sum_probs=58.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHH-CCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc-CCCEEEEccccCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALD-RGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-GVTAVISCVGGFGS  134 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~-~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-~~d~vi~~ag~~~~  134 (198)
                      .+|+|.|| |.+|+.+++.+.. .+++++++.-+.+. .....-.++.++..     +.+.+..+ .+++.+.+...   
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~-k~G~~I~Gi~V~~~-----~~l~~~~~~~i~iai~~i~~---   73 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPE-KVGRPVRGGVIEHV-----DLLPQRVPGRIEIALLTVPR---   73 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTT-TTTCEETTEEEEEG-----GGHHHHSTTTCCEEEECSCH---
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchH-hcCCEECCEEEecH-----HHHHHHHhhcccEEEEeCCH---
Confidence            48999998 9999999987754 46888877644322 11112345666533     34555544 46666555432   


Q ss_pred             CccceehhhHHHHHHHHHHHHcCCCEEEEeecc
Q 029125          135 NSYMYKINGTANINAIRAASEKGVKRFVYISAA  167 (198)
Q Consensus       135 ~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~  167 (198)
                               .....+++.|.+.|++.|..++..
T Consensus        74 ---------~~~~~I~d~l~~~gIk~I~~f~~~   97 (126)
T d2dt5a2          74 ---------EAAQKAADLLVAAGIKGILNFAPV   97 (126)
T ss_dssp             ---------HHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             ---------HHHHHHHHHHHHcCCCEEeecCce
Confidence                     223457888888999988887664

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=95.73  E-value=0.0059  Score=41.91  Aligned_cols=34  Identities=21%  Similarity=0.328  Sum_probs=29.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSG   90 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~   90 (198)
                      +|+|+|.|| |++|..++..|.+.+  .+|+++.+++
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            689999998 999999999999987  4788888765

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.72  E-value=0.0033  Score=44.01  Aligned_cols=35  Identities=23%  Similarity=0.424  Sum_probs=31.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      |+|.|+|- |..|..+++.|++.|++|++.+|++++
T Consensus         2 MkIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~   36 (178)
T d1pgja2           2 MDVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSK   36 (178)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred             CEEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence            57999985 999999999999999999999997644

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=95.72  E-value=0.012  Score=42.80  Aligned_cols=37  Identities=24%  Similarity=0.414  Sum_probs=33.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      ....++|+|+|| |..|...+..|.++|++|+++.++.
T Consensus        46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             ccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            346789999998 9999999999999999999998764

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=95.71  E-value=0.0054  Score=45.15  Aligned_cols=33  Identities=27%  Similarity=0.452  Sum_probs=30.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      |+|+|+|| |.-|...+..|.++|++|+++.++.
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            57999998 9999999999999999999998764

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.66  E-value=0.0086  Score=42.42  Aligned_cols=70  Identities=10%  Similarity=-0.021  Sum_probs=48.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ...+++|.|.|. |.||+.+++.|..-|.+|...++.......... .+       +....++.++++..|+|+.+...
T Consensus        41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-~~-------~~~~~~l~~~l~~sD~v~~~~pl  110 (188)
T d2naca1          41 DLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE-LN-------LTWHATREDMYPVCDVVTLNCPL  110 (188)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH-HT-------CEECSSHHHHGGGCSEEEECSCC
T ss_pred             eccccceeeccc-cccchhhhhhhhccCceEEEEeecccccccccc-cc-------ccccCCHHHHHHhccchhhcccc
Confidence            356789999996 999999999999999999999986543211100 01       11123456778888888766543

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.66  E-value=0.0092  Score=44.51  Aligned_cols=35  Identities=23%  Similarity=0.435  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      +..+|+|+|| |.-|...+..|.++|++|.++-.+.
T Consensus         4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            4568999998 9999999999999999999997653

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=95.65  E-value=0.016  Score=42.95  Aligned_cols=33  Identities=15%  Similarity=0.276  Sum_probs=30.0

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      -|+|+|| |..|..++.+|+++|++|+++.+...
T Consensus         5 DvvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~~   37 (281)
T d2gf3a1           5 DVIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFDP   37 (281)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            4899998 99999999999999999999998643

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=95.62  E-value=0.012  Score=41.46  Aligned_cols=76  Identities=14%  Similarity=0.080  Sum_probs=51.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEcc--------------------C--CCHH
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGN--------------------L--LSSD  113 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D--------------------~--~d~~  113 (198)
                      +-+|+|.|| |-.|..-++-...-|.+|.++|.+.....+... -.-.++..+                    .  ...+
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~-l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES-LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH-TTCEECCC-----------------------CCHHH
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH-hhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            458999998 999999999999999999999988765222110 011111111                    1  1245


Q ss_pred             HHHHHhcCCCEEEEccccCC
Q 029125          114 SWKEALDGVTAVISCVGGFG  133 (198)
Q Consensus       114 ~~~~~~~~~d~vi~~ag~~~  133 (198)
                      .+.+.+++.|+||-++-..+
T Consensus       107 ~l~~~l~~aDlVI~talipG  126 (183)
T d1l7da1         107 AVLKELVKTDIAITTALIPG  126 (183)
T ss_dssp             HHHHHHTTCSEEEECCCCTT
T ss_pred             HHHHHHHhhhhheeeeecCC
Confidence            56677889999999886544

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.54  E-value=0.0054  Score=45.81  Aligned_cols=33  Identities=18%  Similarity=0.289  Sum_probs=30.6

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      +|+|.|| |..|..++..|.+.|++|.++.+++.
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            7999998 89999999999999999999998753

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=95.47  E-value=0.017  Score=36.88  Aligned_cols=37  Identities=22%  Similarity=0.177  Sum_probs=31.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      ..+|+|+|.|+ |.-|.-++..|++.+.+|+.+.|+..
T Consensus        30 f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          30 FVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             cCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            46799999997 89999999999998888777776644

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=95.39  E-value=0.03  Score=38.65  Aligned_cols=65  Identities=11%  Similarity=0.214  Sum_probs=40.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHC-CCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      +.+|.|.|. |.+|+..++.+.+. +.+++++..+.....     .......     ..++..+.+++|+|+.+...
T Consensus         3 kirvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~~~~~-----~~~~~~~-----~~~~~~~~~~~D~Vvi~tp~   68 (170)
T d1f06a1           3 NIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRATLD-----TKTPVFD-----VADVDKHADDVDVLFLCMGS   68 (170)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSCCS-----SSSCEEE-----GGGGGGTTTTCSEEEECSCT
T ss_pred             cceEEEECC-hHHHHHHHHHHHhCCCcEEEEEEecccccc-----ccccccc-----chhhhhhccccceEEEeCCC
Confidence            457999995 99999999999876 567765543322211     1111211     11233445689999988764

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=95.37  E-value=0.017  Score=39.26  Aligned_cols=35  Identities=14%  Similarity=0.294  Sum_probs=29.0

Q ss_pred             CCeEEEE-cCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           56 SEKLLVL-GGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        56 ~~~vlvt-GatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      .+.++|. .+.|++|..++..|++.|++|+++.+.+
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            4566665 2459999999999999999999999864

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.32  E-value=0.0092  Score=40.59  Aligned_cols=35  Identities=17%  Similarity=0.378  Sum_probs=30.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecCCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRS   92 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~~~~   92 (198)
                      |+|.+.|+ |.+|.++++.|++.| ++|++.+|++++
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~   36 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEK   36 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHH
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhH
Confidence            57999997 999999999999887 899999998643

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=95.28  E-value=0.034  Score=38.97  Aligned_cols=38  Identities=18%  Similarity=0.253  Sum_probs=31.2

Q ss_pred             CCCeEEE-EcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           55 PSEKLLV-LGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        55 ~~~~vlv-tGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      .+.+++| +||+|.+|...++.....|.+|+++.|+.+.
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~   66 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN   66 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccc
Confidence            3456666 5899999999999888889999999987654

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.22  E-value=0.025  Score=37.77  Aligned_cols=29  Identities=31%  Similarity=0.489  Sum_probs=23.9

Q ss_pred             eEEEEcCCchhHHHHHHHHHHC-CCeEEEe
Q 029125           58 KLLVLGGNGFVGSHICREALDR-GLTVASL   86 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~-g~~V~~l   86 (198)
                      ||.|.|++|-.|+.+++.+.+. ++++...
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~   30 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAE   30 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEE
Confidence            6899999999999999988775 5666543

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.17  E-value=0.011  Score=41.99  Aligned_cols=32  Identities=19%  Similarity=0.295  Sum_probs=29.6

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      -|+|+|| |..|...+..|+++|++|.++.++.
T Consensus         7 DviViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           7 DVIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            5899997 9999999999999999999999874

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=95.17  E-value=0.0089  Score=45.31  Aligned_cols=35  Identities=14%  Similarity=0.286  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      |..|+|+|| |..|..++..|++.|++|.++.++..
T Consensus         1 M~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           1 MYDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             CccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            457999998 99999999999999999999987643

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.14  E-value=0.15  Score=33.44  Aligned_cols=76  Identities=14%  Similarity=0.309  Sum_probs=53.1

Q ss_pred             CCCCeEEEEcCCc----------hhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--C
Q 029125           54 PPSEKLLVLGGNG----------FVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--G  121 (198)
Q Consensus        54 ~~~~~vlvtGatG----------~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~  121 (198)
                      ...++|+|.|+..          +-+.+.++.|.+.|++++++.-++..-.. . .+-..-+.......+.+.++++  +
T Consensus         5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVst-d-~d~aD~lYfePlt~e~v~~Ii~~E~   82 (127)
T d1a9xa3           5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMT-D-PEMADATYIEPIHWEVVRKIIEKER   82 (127)
T ss_dssp             SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGG-C-GGGSSEEECSCCCHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhc-C-hhhcceeeeecCCHHHHHHHHHHhC
Confidence            3568999999843          56778999999999999999877644111 1 1112334445666888888775  7


Q ss_pred             CCEEEEcccc
Q 029125          122 VTAVISCVGG  131 (198)
Q Consensus       122 ~d~vi~~ag~  131 (198)
                      +|.|+-..|.
T Consensus        83 pd~il~~~GG   92 (127)
T d1a9xa3          83 PDAVLPTMGG   92 (127)
T ss_dssp             CSEEECSSSH
T ss_pred             cCCeEEEeee
Confidence            9999877664

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=95.09  E-value=0.011  Score=40.30  Aligned_cols=36  Identities=19%  Similarity=0.261  Sum_probs=30.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHC--CCeEEEeecCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDR--GLTVASLSRSG   90 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~--g~~V~~l~r~~   90 (198)
                      ++|+|.|.|+||.||...+.-+.+.  .++|++++-..
T Consensus         1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~   38 (150)
T d1r0ka2           1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR   38 (150)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence            3689999999999999999998875  47888887654

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.01  E-value=0.015  Score=40.10  Aligned_cols=35  Identities=11%  Similarity=0.228  Sum_probs=28.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      .+++|+|.|| |++|..++..|.+.|.+|.++.+..
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecC
Confidence            3578999998 9999999999999998776655443

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=95.01  E-value=0.013  Score=39.96  Aligned_cols=35  Identities=20%  Similarity=0.314  Sum_probs=29.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSG   90 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~   90 (198)
                      ||+|.|.|+||.||...+.-+.+..  ++|.++.-..
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~   37 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK   37 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence            6899999999999999999888763  6888887544

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.97  E-value=0.011  Score=40.90  Aligned_cols=70  Identities=16%  Similarity=0.133  Sum_probs=50.4

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG  131 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~  131 (198)
                      ....+|+++|.|- |.+|+-+++.|...|.+|++...+|-...+.. -++.++.        .++++++..|++|-+.|.
T Consensus        19 ~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~-mdGf~v~--------~~~~a~~~aDi~vTaTGn   88 (163)
T d1v8ba1          19 FLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAV-MEGFNVV--------TLDEIVDKGDFFITCTGN   88 (163)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-TTTCEEC--------CHHHHTTTCSEEEECCSS
T ss_pred             ceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhhHHHH-hcCCccC--------chhHccccCcEEEEcCCC
Confidence            3467899999996 99999999999999999999998875543321 2333332        234666667777776663

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=94.87  E-value=0.018  Score=43.71  Aligned_cols=36  Identities=28%  Similarity=0.467  Sum_probs=31.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      .+...|+|+|| |..|..++..|.++|.+|+++.+.+
T Consensus         5 ~~~~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           5 PEEVDVLVVGA-GFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             CSEEEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CCCCCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            34567999998 9999999999999999999998764

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=94.85  E-value=0.015  Score=43.51  Aligned_cols=32  Identities=25%  Similarity=0.692  Sum_probs=29.0

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGL-TVASLSRSG   90 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~   90 (198)
                      +|+|+|| |.+|..++.+|+++|. +|.+++|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            6999998 9999999999999996 699999864

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=94.78  E-value=0.018  Score=41.12  Aligned_cols=33  Identities=18%  Similarity=0.465  Sum_probs=29.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGL-TVASLSRSG   90 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~   90 (198)
                      ++|+|+|| |..|...+..|.++|+ +|+++.++.
T Consensus         1 P~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           1 PRVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            36999998 9999999999999996 699998764

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.65  E-value=0.025  Score=41.27  Aligned_cols=35  Identities=23%  Similarity=0.339  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGR   91 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~   91 (198)
                      +.+|+|+|| |..|..++..|.+.|. +|.++.+++.
T Consensus         1 ~~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           1 PIDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            368999998 9999999999999995 8999988654

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=94.63  E-value=0.17  Score=34.76  Aligned_cols=70  Identities=13%  Similarity=0.115  Sum_probs=43.7

Q ss_pred             CCeEEEEcCCchhHHH--HHHHHHHC----CCeEEEeecCCCCccc---------ccCCCCeEEEEccCCCHHHHHHHhc
Q 029125           56 SEKLLVLGGNGFVGSH--ICREALDR----GLTVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALD  120 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~--l~~~l~~~----g~~V~~l~r~~~~~~~---------~~~~~~~~~~~~D~~d~~~~~~~~~  120 (198)
                      .+||.|.|| |.+|..  ++..|+..    +.+++++++++++...         ........+...     .+.+++++
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~-----td~~eaL~   75 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT-----MNLDDVII   75 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE-----SCHHHHHT
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe-----CChhhccc
Confidence            469999997 888864  34444432    3599999998654211         111223333221     23567789


Q ss_pred             CCCEEEEcccc
Q 029125          121 GVTAVISCVGG  131 (198)
Q Consensus       121 ~~d~vi~~ag~  131 (198)
                      ++|+||.+++.
T Consensus        76 dad~Vv~~~~~   86 (171)
T d1obba1          76 DADFVINTAMV   86 (171)
T ss_dssp             TCSEEEECCCT
T ss_pred             CCCeEeeeccc
Confidence            99999999864

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.51  E-value=0.023  Score=39.58  Aligned_cols=37  Identities=11%  Similarity=0.202  Sum_probs=31.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      .++++|+|.|+ |+.+++++..|.+.| +|+++.|+.++
T Consensus        16 ~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~k   52 (177)
T d1nvta1          16 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEK   52 (177)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhH
Confidence            46789999997 889999999997766 99999998554

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=94.49  E-value=0.027  Score=36.40  Aligned_cols=35  Identities=23%  Similarity=0.399  Sum_probs=28.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHH---CCCeEEEeecCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALD---RGLTVASLSRSG   90 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~---~g~~V~~l~r~~   90 (198)
                      .+++++|.|| |++|..++..|.+   +|.+|+++.|.+
T Consensus        19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          19 PPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             cCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            3579999998 9999999966554   567899998864

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.39  E-value=0.043  Score=43.75  Aligned_cols=73  Identities=14%  Similarity=0.236  Sum_probs=48.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCC--c--cc--------------------ccCCC--CeEEEEc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS--S--LR--------------------DSWAN--NVIWHQG  107 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~--~--~~--------------------~~~~~--~~~~~~~  107 (198)
                      +..+|+|.|+ |++|..+++.|+..|. ++.++|.+.=.  .  .+                    ....+  ++..+..
T Consensus        36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~  114 (426)
T d1yovb1          36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN  114 (426)
T ss_dssp             HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECS
T ss_pred             hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeec
Confidence            3568999998 8899999999999996 88888865210  0  00                    00012  3455555


Q ss_pred             cCCCHHHHHHHhcCCCEEEEccc
Q 029125          108 NLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus       108 D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                      ++.+..  .+.+++.|+||.+..
T Consensus       115 ~i~~~~--~~~~~~~DlVi~~~D  135 (426)
T d1yovb1         115 KIQDFN--DTFYRQFHIIVCGLD  135 (426)
T ss_dssp             CGGGBC--HHHHTTCSEEEECCS
T ss_pred             cccchH--HHHHHhcchheeccC
Confidence            554432  356788999988664

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.33  E-value=0.056  Score=37.74  Aligned_cols=32  Identities=13%  Similarity=0.366  Sum_probs=26.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeec
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSR   88 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r   88 (198)
                      |.||.|-| .|-||+.+++.+.+++ .+|+.+.-
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd   33 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAK   33 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEC
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEEC
Confidence            46899999 6999999999999875 68777753

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.32  E-value=0.038  Score=39.46  Aligned_cols=37  Identities=22%  Similarity=0.241  Sum_probs=32.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      ..++++|+|-|- |.+|.++++.|.+.|.+|++.+.+.
T Consensus        24 ~L~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~   60 (201)
T d1c1da1          24 SLDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDT   60 (201)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchH
Confidence            467899999985 9999999999999999999888654

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=94.30  E-value=0.034  Score=35.76  Aligned_cols=36  Identities=22%  Similarity=0.341  Sum_probs=29.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHH---CCCeEEEeecCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALD---RGLTVASLSRSGR   91 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~---~g~~V~~l~r~~~   91 (198)
                      .+++++|.|| |++|..++..|.+   .|.+|.++.|.+.
T Consensus        17 ~p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          17 APKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             cCCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            3579999998 9999999976554   4889999998643

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.20  E-value=0.23  Score=35.44  Aligned_cols=75  Identities=17%  Similarity=0.167  Sum_probs=46.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC---eEEEeecCCCCcccccCCCCeEEEEccC-------------------CCHH
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLRDSWANNVIWHQGNL-------------------LSSD  113 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~D~-------------------~d~~  113 (198)
                      ..+|.|.|- |+-|..++..|.+.|.   +.++++.+...  .........+..+.-                   .+.+
T Consensus        15 ~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~--L~~~~~~~ki~ig~~~t~g~Gag~~p~~g~~aa~e~~~   91 (209)
T d2vapa1          15 KAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDAQQ--LIRTKADKKILIGKKLTRGLGAGGNPKIGEEAAKESAE   91 (209)
T ss_dssp             CCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBHHH--HHTSCCSEEEECCTTTTTTBCCTTCHHHHHHHHHHTHH
T ss_pred             CCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCHHH--HhcCCcchhcccccccccccccccchHHHHHHHHHHHH
Confidence            468999997 8999999999998764   44555543211  111111111211111                   2345


Q ss_pred             HHHHHhcCCCEEEEccccCC
Q 029125          114 SWKEALDGVTAVISCVGGFG  133 (198)
Q Consensus       114 ~~~~~~~~~d~vi~~ag~~~  133 (198)
                      .+.+.+++.|.||-+||..+
T Consensus        92 ~I~~~l~~~d~vfi~AGlGG  111 (209)
T d2vapa1          92 EIKAAIQDSDMVFITCGLGG  111 (209)
T ss_dssp             HHHHHHTTCSEEEEEEETTS
T ss_pred             HHHHhccCCCEEEEEEeCCC
Confidence            78888899999999998643

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=94.16  E-value=0.081  Score=36.24  Aligned_cols=77  Identities=18%  Similarity=0.195  Sum_probs=46.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCCcccccCCCCeEEEEccCCC--HHHHHHHh--cCCCEEEEc
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLS--SDSWKEAL--DGVTAVISC  128 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~--~~~d~vi~~  128 (198)
                      ..+.+|+|.|+ |.+|...+..+...|. +|++.++++.+........-..++..+-.+  .+.+....  .++|++|.+
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~~~~~~~~~~~~~~~~~G~d~vid~  105 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLEC  105 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEEC
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCCCcchhHHHHHHhhccCCcceeeee
Confidence            35678999997 7788888888888775 788888876552211111222333221111  23333333  369999999


Q ss_pred             ccc
Q 029125          129 VGG  131 (198)
Q Consensus       129 ag~  131 (198)
                      .|.
T Consensus       106 ~G~  108 (175)
T d1cdoa2         106 VGN  108 (175)
T ss_dssp             SCC
T ss_pred             cCC
Confidence            985

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.91  E-value=0.005  Score=44.46  Aligned_cols=26  Identities=23%  Similarity=0.387  Sum_probs=23.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTV   83 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V   83 (198)
                      |+|+|+|| |-+|..++.+|+++|++|
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence            57999998 999999999999999754

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.74  E-value=0.039  Score=37.34  Aligned_cols=31  Identities=16%  Similarity=0.374  Sum_probs=26.8

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      ||+|.|| |++|..++..|. ++.+|+++.+.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence            7899998 999999999885 478999998754

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.69  E-value=0.038  Score=38.72  Aligned_cols=33  Identities=21%  Similarity=0.306  Sum_probs=28.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHC--CCeEEEeecCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDR--GLTVASLSRSG   90 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~--g~~V~~l~r~~   90 (198)
                      |||+|.|| |++|..++..|.+.  +.+|+++.|+.
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            68999998 99999999999886  46888888754

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=93.63  E-value=0.13  Score=36.54  Aligned_cols=73  Identities=10%  Similarity=0.012  Sum_probs=44.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccC---------CCCeEEEE-ccCCCHHHHHHHhc-CCCEE
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSW---------ANNVIWHQ-GNLLSSDSWKEALD-GVTAV  125 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~---------~~~~~~~~-~D~~d~~~~~~~~~-~~d~v  125 (198)
                      |+|++.|. +..|..+++.|++.|++|..+...+++......         ..++.++. .++.+++.++.+-+ ++|++
T Consensus         1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~i~~~~~Dli   79 (203)
T d2blna2           1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVI   79 (203)
T ss_dssp             CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCSEE
T ss_pred             CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhhhhhhhcccce
Confidence            57888865 678999999999999999766543322111100         12455554 35555554433322 68998


Q ss_pred             EEccc
Q 029125          126 ISCVG  130 (198)
Q Consensus       126 i~~ag  130 (198)
                      |...+
T Consensus        80 i~~g~   84 (203)
T d2blna2          80 FSFYY   84 (203)
T ss_dssp             EEESC
T ss_pred             eeeec
Confidence            88765

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.63  E-value=0.037  Score=38.97  Aligned_cols=33  Identities=21%  Similarity=0.195  Sum_probs=27.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      |+|.|.| .|++|..++..| ++|++|++.|.++.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~   33 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPS   33 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHH
Confidence            6799998 599999998755 57999999997753

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=93.61  E-value=0.3  Score=34.33  Aligned_cols=74  Identities=19%  Similarity=0.253  Sum_probs=46.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCC---CeEEEeecCCCCcccccCCCCeEEEEcc-C------------------CCHHH
Q 029125           57 EKLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLRDSWANNVIWHQGN-L------------------LSSDS  114 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g---~~V~~l~r~~~~~~~~~~~~~~~~~~~D-~------------------~d~~~  114 (198)
                      +||.|.|- |+-|..++.+|.+.+   .+.++++.+...  .........+..+. +                  .+.+.
T Consensus         1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~--L~~~~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~~~~   77 (194)
T d1w5fa1           1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDLQV--LEASNADVKIQIGENITRGLGAGGRPEIGEQAALESEEK   77 (194)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCHHH--HHTCCCSEEEECCTTTTTTSCCTTCHHHHHHHHHHTHHH
T ss_pred             CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCHHH--HhcCCcceEEecccccCCCcccccCchhhHhHHHHHHHH
Confidence            37889997 899999999999876   355666543211  11111112222221 1                  23567


Q ss_pred             HHHHhcCCCEEEEccccCC
Q 029125          115 WKEALDGVTAVISCVGGFG  133 (198)
Q Consensus       115 ~~~~~~~~d~vi~~ag~~~  133 (198)
                      +.+.+++.|.||-+||..+
T Consensus        78 I~~~l~~~d~vfi~AGlGG   96 (194)
T d1w5fa1          78 IREVLQDTHMVFITAGFGG   96 (194)
T ss_dssp             HHHHTTTCSEEEEEEETTS
T ss_pred             HHHHhcCCCeEEEEEecCC
Confidence            8888899999999998543

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.55  E-value=0.043  Score=41.12  Aligned_cols=31  Identities=32%  Similarity=0.550  Sum_probs=28.7

Q ss_pred             EEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        59 vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      |+|+|| |.-|...+..|.++|++|+++.++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            789997 9999999999999999999998754

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=93.52  E-value=0.027  Score=41.59  Aligned_cols=35  Identities=14%  Similarity=0.276  Sum_probs=29.6

Q ss_pred             CCeEEEEcCCchhHHH-----HHHHHHHCCCeEEEeecCCC
Q 029125           56 SEKLLVLGGNGFVGSH-----ICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~-----l~~~l~~~g~~V~~l~r~~~   91 (198)
                      |++|.|+| -|++|+.     |+..|++.|++|.++|.++.
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            67899998 8999984     66688899999999998753

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.44  E-value=0.14  Score=35.20  Aligned_cols=106  Identities=13%  Similarity=0.014  Sum_probs=57.7

Q ss_pred             CCeEEEEcCC-chhHHHHHHHHHHCC----CeEEEeecCCCCcccc-----------cCCCCeEEEEccCCCHHHHHHHh
Q 029125           56 SEKLLVLGGN-GFVGSHICREALDRG----LTVASLSRSGRSSLRD-----------SWANNVIWHQGNLLSSDSWKEAL  119 (198)
Q Consensus        56 ~~~vlvtGat-G~iG~~l~~~l~~~g----~~V~~l~r~~~~~~~~-----------~~~~~~~~~~~D~~d~~~~~~~~  119 (198)
                      ++||.|.||. .+.+..++..+....    .++++++.+++.....           ....+..+.  ..+|   ..+.+
T Consensus         1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~--~~td---~~~al   75 (169)
T d1s6ya1           1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIH--LTLD---RRRAL   75 (169)
T ss_dssp             CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEE--EESC---HHHHH
T ss_pred             CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceee--ecCC---chhhc
Confidence            3689999973 234444544444322    4889999876431110           011122222  2222   35668


Q ss_pred             cCCCEEEEccccCCCC--c--cc--------------------eehhhHHHHHHHHHHHHcCCCEEEEeec
Q 029125          120 DGVTAVISCVGGFGSN--S--YM--------------------YKINGTANINAIRAASEKGVKRFVYISA  166 (198)
Q Consensus       120 ~~~d~vi~~ag~~~~~--~--~~--------------------~~~n~~~~~~~~~a~~~~~~~~~v~~Ss  166 (198)
                      ++.|+||.+++..+..  .  ..                    ..-|+.-.+.+++..++.....++++-|
T Consensus        76 ~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vt  146 (169)
T d1s6ya1          76 DGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFT  146 (169)
T ss_dssp             TTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeC
Confidence            8999999999854311  0  00                    1134444556777777777766655543

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.41  E-value=0.052  Score=36.00  Aligned_cols=35  Identities=26%  Similarity=0.429  Sum_probs=29.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHH----CCCeEEEeecCCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALD----RGLTVASLSRSGR   91 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~----~g~~V~~l~r~~~   91 (198)
                      .++++|.|| |++|..++..|.+    .|.+|+++.+...
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            578999998 9999999988863    5889999987643

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.39  E-value=0.11  Score=35.10  Aligned_cols=37  Identities=27%  Similarity=0.275  Sum_probs=30.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCC
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGR   91 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~   91 (198)
                      ..+++|+|.|| |.+|.-.+..+++.|. .|+++.|+..
T Consensus        43 ~~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~~   80 (153)
T d1gtea3          43 SIRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKGF   80 (153)
T ss_dssp             CCCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred             cCCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCCh
Confidence            34678999997 9999999999999986 5778777643

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.38  E-value=0.21  Score=34.41  Aligned_cols=76  Identities=11%  Similarity=0.115  Sum_probs=44.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeec-CCCCcccccCCCCeEEEEccCCC-----------HHHHHHHhcCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSR-SGRSSLRDSWANNVIWHQGNLLS-----------SDSWKEALDGV  122 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r-~~~~~~~~~~~~~~~~~~~D~~d-----------~~~~~~~~~~~  122 (198)
                      .++|.|-|- |-||+.+++.+..+. .+|+.+.- .+..........+...+..+-..           ...+..+++++
T Consensus         2 ~irIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v   80 (172)
T d2czca2           2 KVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKV   80 (172)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTC
T ss_pred             cEEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccC
Confidence            468999995 999999999998865 57666542 22211111111112222222111           12344556689


Q ss_pred             CEEEEccccC
Q 029125          123 TAVISCVGGF  132 (198)
Q Consensus       123 d~vi~~ag~~  132 (198)
                      |+||-|.|.+
T Consensus        81 DvViEcTG~f   90 (172)
T d2czca2          81 DIIVDATPGG   90 (172)
T ss_dssp             SEEEECCSTT
T ss_pred             CEEEECCCCC
Confidence            9999999974

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.36  E-value=0.022  Score=39.49  Aligned_cols=31  Identities=19%  Similarity=0.264  Sum_probs=25.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEee
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLS   87 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~   87 (198)
                      +.+|+|.|| |++|..++..|.+.|.+|.++.
T Consensus         3 ~a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~   33 (183)
T d1d7ya1           3 KAPVVVLGA-GLASVSFVAELRQAGYQGLITV   33 (183)
T ss_dssp             CSSEEEECC-SHHHHHHHHHHHHHTCCSCEEE
T ss_pred             CCCEEEECc-cHHHHHHHHHHHhcCCceEEEE
Confidence            346999997 9999999999999987654443

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=93.26  E-value=0.052  Score=39.13  Aligned_cols=33  Identities=27%  Similarity=0.476  Sum_probs=29.9

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      .|+|+|| |..|...+..|.++|++|.++.++..
T Consensus         4 DViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           4 DVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            5899998 99999999999999999999998653

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.19  E-value=0.045  Score=40.01  Aligned_cols=97  Identities=13%  Similarity=0.130  Sum_probs=58.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCC-eEEEeecCCCC--c--cc--------------------ccCCCCeEEEEccC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS--S--LR--------------------DSWANNVIWHQGNL  109 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~-~V~~l~r~~~~--~--~~--------------------~~~~~~~~~~~~D~  109 (198)
                      ...+|+|.|+ |++|.+++..|+..|. +++++|.+.=.  .  .+                    ....+.+.+...+.
T Consensus        29 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~  107 (247)
T d1jw9b_          29 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA  107 (247)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhh
Confidence            4579999997 9999999999999996 78888754210  0  00                    00123344433333


Q ss_pred             C-CHHHHHHHhcCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEe
Q 029125          110 L-SSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYI  164 (198)
Q Consensus       110 ~-d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~  164 (198)
                      . +.+.....+.+.|++|.+...           ......+-+.|.+.++. +|+.
T Consensus       108 ~~~~~~~~~~~~~~divid~~d~-----------~~~~~~in~~~~~~~ip-~i~g  151 (247)
T d1jw9b_         108 LLDDAELAALIAEHDLVLDCTDN-----------VAVRNQLNAGCFAAKVP-LVSG  151 (247)
T ss_dssp             CCCHHHHHHHHHTSSEEEECCSS-----------HHHHHHHHHHHHHHTCC-EEEE
T ss_pred             hhhhccccccccccceeeeccch-----------hhhhhhHHHHHHHhCCC-cccc
Confidence            2 345566677788888876532           12223445566666654 4443

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=93.16  E-value=0.034  Score=38.09  Aligned_cols=71  Identities=11%  Similarity=0.165  Sum_probs=39.2

Q ss_pred             CCCeEEEEcCCchhHHHHH-HHHHHCC-CeEEEe-ecCCCCcc-cccCCCCeEEEEccCCCHHHHHHH--hcCCCEEEEc
Q 029125           55 PSEKLLVLGGNGFVGSHIC-REALDRG-LTVASL-SRSGRSSL-RDSWANNVIWHQGNLLSSDSWKEA--LDGVTAVISC  128 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~-~~l~~~g-~~V~~l-~r~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~--~~~~d~vi~~  128 (198)
                      ++.+|.|.| +|++|..+. +.|.... .+++++ +|+..... ......++.+..   .+.+++.+.  +.++|+||.+
T Consensus         3 kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~---~~~d~l~~~~~~~~iDiVf~A   78 (157)
T d1nvmb1           3 QKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY---AGVEGLIKLPEFADIDFVFDA   78 (157)
T ss_dssp             SCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES---SHHHHHHHSGGGGGEEEEEEC
T ss_pred             CCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc---cceeeeeecccccccCEEEEc
Confidence            456899999 799998654 4444443 467666 45543211 111112333322   224445443  3479999986


Q ss_pred             c
Q 029125          129 V  129 (198)
Q Consensus       129 a  129 (198)
                      .
T Consensus        79 T   79 (157)
T d1nvmb1          79 T   79 (157)
T ss_dssp             S
T ss_pred             C
Confidence            4

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.08  E-value=0.15  Score=38.37  Aligned_cols=34  Identities=24%  Similarity=0.173  Sum_probs=28.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      .+.+=--.||..|.+|++.|+.+|++|+++.+..
T Consensus        37 VR~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~~   70 (290)
T d1p9oa_          37 VRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   70 (290)
T ss_dssp             SEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             ceEeCCCCchHHHHHHHHHHHHcCCEEEEEecCC
Confidence            4555556789999999999999999999997653

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.50  E-value=0.063  Score=38.27  Aligned_cols=35  Identities=17%  Similarity=0.192  Sum_probs=29.9

Q ss_pred             CCeEEEEcCCchhHH-----HHHHHHHHCCCeEEEeecCC
Q 029125           56 SEKLLVLGGNGFVGS-----HICREALDRGLTVASLSRSG   90 (198)
Q Consensus        56 ~~~vlvtGatG~iG~-----~l~~~l~~~g~~V~~l~r~~   90 (198)
                      ||.|.|+++-|++|+     +|+..|+++|.+|.+++-+.
T Consensus         1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            678999999999998     56778888999999998764

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=92.36  E-value=0.12  Score=38.01  Aligned_cols=38  Identities=26%  Similarity=0.336  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCchhHHH-----HHHHHHHCCCeEEEeecCCCC
Q 029125           55 PSEKLLVLGGNGFVGSH-----ICREALDRGLTVASLSRSGRS   92 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~-----l~~~l~~~g~~V~~l~r~~~~   92 (198)
                      .+.+|+|+.|-|++|+.     |+..|+++|++|.+++.++..
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~~   60 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPAA   60 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC-
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence            45678888889999995     578888999999999998643

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=92.24  E-value=0.074  Score=40.69  Aligned_cols=31  Identities=16%  Similarity=0.236  Sum_probs=28.5

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRS   89 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~   89 (198)
                      -|+|+|+ |+-|..++.+|.++|++|.+|-+.
T Consensus         4 ~VIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           4 PAVVIGT-GYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             eEEEeCc-CHHHHHHHHHHHHCcCeEEEEecC
Confidence            4789996 999999999999999999999885

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.05  E-value=1.1  Score=31.35  Aligned_cols=73  Identities=16%  Similarity=0.195  Sum_probs=46.1

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCC---CeEEEeecCCCCcccccCCCCeEEEEcc-----------C--------CCHHHH
Q 029125           58 KLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLRDSWANNVIWHQGN-----------L--------LSSDSW  115 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g---~~V~~l~r~~~~~~~~~~~~~~~~~~~D-----------~--------~d~~~~  115 (198)
                      +|-|.|- |+-|..++..|.+.+   .+.++++.+.....  ..+....+..++           .        .+.+.+
T Consensus         3 ~IkViGv-GGaG~n~v~~~~~~~~~~v~~iainTD~~~L~--~~~~~~ki~iG~~~~~g~G~gg~p~~g~~aa~e~~~~I   79 (198)
T d1ofua1           3 VIKVIGV-GGGGGNAVNHMAKNNVEGVEFICANTDAQALK--NIAARTVLQLGPGVTKGLGAGANPEVGRQAALEDRERI   79 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESBTGGGS--SCSCSEEEECCHHHHTTBCCCSCHHHHHHHHHHTHHHH
T ss_pred             eEEEEEE-CchHHHHHHHHHHcCCCCeEEEEEeCcHHHHh--cCCccceeccccccccCCCCCCChHHHHHHHHHHHHHH
Confidence            5778886 889999999999987   35666655432211  111111221111           1        245668


Q ss_pred             HHHhcCCCEEEEccccCC
Q 029125          116 KEALDGVTAVISCVGGFG  133 (198)
Q Consensus       116 ~~~~~~~d~vi~~ag~~~  133 (198)
                      .+.+++.|.||-+||..+
T Consensus        80 ~~~l~~~d~vfi~AGlGG   97 (198)
T d1ofua1          80 SEVLEGADMVFITTGMGG   97 (198)
T ss_dssp             HHHHTTCSEEEEEEETTS
T ss_pred             HHHhCCCCeEEEEecCCC
Confidence            888899999999998643

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=91.99  E-value=0.081  Score=39.84  Aligned_cols=34  Identities=21%  Similarity=0.340  Sum_probs=29.3

Q ss_pred             eEEEEcCCchhHHHHHHHHH-----HCCCeEEEeecCCCC
Q 029125           58 KLLVLGGNGFVGSHICREAL-----DRGLTVASLSRSGRS   92 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~-----~~g~~V~~l~r~~~~   92 (198)
                      -|+|+|| |-.|..++..|+     ++|++|+++.|++..
T Consensus         9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~~   47 (360)
T d1pn0a1           9 DVLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK   47 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCCC
Confidence            5899998 999999999996     479999999987544

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=91.87  E-value=0.33  Score=33.19  Aligned_cols=71  Identities=18%  Similarity=0.125  Sum_probs=41.8

Q ss_pred             CCeEEEEcCCchhHHH-HHHHHHHC-----CCeEEEeecCCCCccc---------ccCCCCeEEEEccCCCHHHHHHHhc
Q 029125           56 SEKLLVLGGNGFVGSH-ICREALDR-----GLTVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALD  120 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~-l~~~l~~~-----g~~V~~l~r~~~~~~~---------~~~~~~~~~~~~D~~d~~~~~~~~~  120 (198)
                      ..||.|.|| |.+|.. ++..++..     +.++++++.++++...         ........+...     .+..++++
T Consensus         3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~eal~   76 (167)
T d1u8xx1           3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT-----TDPEEAFT   76 (167)
T ss_dssp             CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE-----SCHHHHHS
T ss_pred             CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec-----CChhhccC
Confidence            458999998 555654 33444432     2489999987654211         001122232221     13567889


Q ss_pred             CCCEEEEccccC
Q 029125          121 GVTAVISCVGGF  132 (198)
Q Consensus       121 ~~d~vi~~ag~~  132 (198)
                      +.|+||.++|..
T Consensus        77 ~AD~Vvitag~~   88 (167)
T d1u8xx1          77 DVDFVMAHIRVG   88 (167)
T ss_dssp             SCSEEEECCCTT
T ss_pred             CCCEEEECCCcC
Confidence            999999999864

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=91.84  E-value=0.071  Score=38.79  Aligned_cols=34  Identities=15%  Similarity=0.327  Sum_probs=30.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      ..|+|+|| |..|...+..|.++|.+|.++.+.+.
T Consensus         5 ~DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           5 SENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CcEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            46999998 99999999999999999999998754

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=91.74  E-value=0.1  Score=37.15  Aligned_cols=34  Identities=18%  Similarity=0.200  Sum_probs=29.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHC--CCeEEEeecCCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDR--GLTVASLSRSGR   91 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~--g~~V~~l~r~~~   91 (198)
                      ++|+|+|| |.-|...+.+|+++  |++|+++.+.+.
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~   37 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLV   37 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            48999997 99999999999875  789999988753

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=91.71  E-value=0.098  Score=38.98  Aligned_cols=33  Identities=24%  Similarity=0.334  Sum_probs=29.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      --|+|+|+ |..|...+..|+++|.+|+++.+.+
T Consensus        17 ~DVlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          17 VDVVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            36999997 9999999999999999999998764

>d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: 2-methylacyl-CoA racemase Mcr
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.45  E-value=1.7  Score=32.80  Aligned_cols=108  Identities=17%  Similarity=0.161  Sum_probs=65.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC--cccccCCCCeEEEEccCCCHHH---HHHHhcCCCEEEE
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS--SLRDSWANNVIWHQGNLLSSDS---WKEALDGVTAVIS  127 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~--~~~~~~~~~~~~~~~D~~d~~~---~~~~~~~~d~vi~  127 (198)
                      +.++.+|+=.+- ..-|-...+.|++.|++|+=+.+....  ........+=+.+..|+.+++.   +.++++++|+||+
T Consensus         3 PL~girVld~~~-~~agp~~~~~lad~GA~VikvE~p~~~~~~~~~~~nr~K~si~lDl~~~~g~~~~~~Lv~~aDv~i~   81 (359)
T d1x74a1           3 PLSGLRVVELAG-IGPGPHAAMILGDLGADVVRIDRPSSVDGISRDAMLRNRRIVTADLKSDQGLELALKLIAKADVLIE   81 (359)
T ss_dssp             TTTTCEEEEECC-STHHHHHHHHHHHTTCEEEEEECC-----CCCCGGGCSCEEEECCTTSHHHHHHHHHHHTTCSEEEE
T ss_pred             CCCCCEEEEcCC-chHHHHHHHHHHHhCCEEEEECCCCCCCchhhhhhhCCCeEEEEeCcCHHHHHHHHHHHhhCCEEEe
Confidence            445666666653 566788888899999999988653211  1111123445788899988654   5567789999999


Q ss_pred             ccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCC
Q 029125          128 CVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGV  171 (198)
Q Consensus       128 ~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~  171 (198)
                      |-.+..-..  +..   +    .+.+++.+. ++||+|-..||.
T Consensus        82 n~~pg~~~~--lgl---~----~~~l~~~nP-~lI~~sisgfG~  115 (359)
T d1x74a1          82 GYRPGVTER--LGL---G----PEECAKVND-RLIYARMTGWGQ  115 (359)
T ss_dssp             CSCTTHHHH--HTC---S----HHHHHHHCT-TCEEEEEESSCS
T ss_pred             cCCCCchhh--cCC---C----HHHHHhhcC-CceEEEEeCCCC
Confidence            875421000  000   0    233444454 688888766653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=91.35  E-value=0.16  Score=37.16  Aligned_cols=35  Identities=20%  Similarity=0.156  Sum_probs=30.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeec
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSR   88 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r   88 (198)
                      ..++++|+|-|- |.+|+++++.|.+.|.+|+.++-
T Consensus        28 ~l~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          28 GIEGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeec
Confidence            357889999985 99999999999999999987763

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=91.28  E-value=0.19  Score=36.46  Aligned_cols=37  Identities=16%  Similarity=0.209  Sum_probs=32.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      ..++++|+|-|- |.+|.++++.|.+.|.+|++.+.+.
T Consensus        36 ~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~   72 (230)
T d1leha1          36 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNK   72 (230)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccH
Confidence            457899999996 9999999999999999999887653

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=91.05  E-value=0.13  Score=37.92  Aligned_cols=33  Identities=24%  Similarity=0.340  Sum_probs=29.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHC-CCeEEEeecCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDR-GLTVASLSRSG   90 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~r~~   90 (198)
                      ..|+|+|| |.-|...+..|+++ |++|.++.+.+
T Consensus        34 ~DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          34 TDVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence            35999998 99999999999875 99999999875

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.01  E-value=1.1  Score=31.47  Aligned_cols=73  Identities=21%  Similarity=0.255  Sum_probs=44.9

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCC---eEEEeecCCCCcccccCCCCeEEEEc-----------c--------CCCHHHH
Q 029125           58 KLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLRDSWANNVIWHQG-----------N--------LLSSDSW  115 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~-----------D--------~~d~~~~  115 (198)
                      +|-|.|- |+-|..++.++.+.+.   +.++++.+...  .........+..+           |        ..+.+.+
T Consensus         3 ~IkViGv-GGaG~n~vn~~~~~~~~~v~~iainTD~~~--L~~~~~~~ki~iG~~~t~G~Gagg~p~~g~~aa~e~~~~I   79 (198)
T d1rq2a1           3 VIKVVGI-GGGGVNAVNRMIEQGLKGVEFIAINTDAQA--LLMSDADVKLDVGRDSTRGLGAGADPEVGRKAAEDAKDEI   79 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESCHHH--HHHCCCSEEEECCTTTC-----CCCHHHHHHHHHHTHHHH
T ss_pred             eEEEEEe-CchHHHHHHHHHHcCCCCceEEEEcchHHH--HhcCCcchhhccccccccCCCcCcChhhhHhhHHHHHHHH
Confidence            4567775 7789999999999873   55655543211  0111111222222           1        1345778


Q ss_pred             HHHhcCCCEEEEccccCC
Q 029125          116 KEALDGVTAVISCVGGFG  133 (198)
Q Consensus       116 ~~~~~~~d~vi~~ag~~~  133 (198)
                      .+++++.|.||-.||..+
T Consensus        80 ~~~l~~~d~vfi~AGlGG   97 (198)
T d1rq2a1          80 EELLRGADMVFVTAGEGG   97 (198)
T ss_dssp             HHHHTTCSEEEEEEETTS
T ss_pred             HHHhcCCCEEEEEEecCC
Confidence            888899999999998643

>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Azotobacter vinelandii [TaxId: 354]

Probab=90.89  E-value=0.11  Score=38.67  Aligned_cols=34  Identities=15%  Similarity=0.256  Sum_probs=29.0

Q ss_pred             CCeEEEEcCCchhHH-----HHHHHHHHCCCeEEEeecCC
Q 029125           56 SEKLLVLGGNGFVGS-----HICREALDRGLTVASLSRSG   90 (198)
Q Consensus        56 ~~~vlvtGatG~iG~-----~l~~~l~~~g~~V~~l~r~~   90 (198)
                      |++|+|.| -|++|+     +|+..|++.|++|.++|-++
T Consensus         2 Mr~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~Dp   40 (289)
T d2afhe1           2 MRQCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDP   40 (289)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             ccEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecCC
Confidence            67899987 799998     46788889999999999875

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=90.70  E-value=0.092  Score=36.83  Aligned_cols=31  Identities=23%  Similarity=0.340  Sum_probs=26.4

Q ss_pred             CeEEEEcCCchhHH-----HHHHHHHHCCCeEEEee
Q 029125           57 EKLLVLGGNGFVGS-----HICREALDRGLTVASLS   87 (198)
Q Consensus        57 ~~vlvtGatG~iG~-----~l~~~l~~~g~~V~~l~   87 (198)
                      |+++|||...++|+     .|+..|.++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            68999997559998     57788889999999986

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.63  E-value=0.16  Score=36.09  Aligned_cols=34  Identities=21%  Similarity=0.351  Sum_probs=28.7

Q ss_pred             CCeEEEEcCCchhHH-----HHHHHHHHCCCeEEEeecC
Q 029125           56 SEKLLVLGGNGFVGS-----HICREALDRGLTVASLSRS   89 (198)
Q Consensus        56 ~~~vlvtGatG~iG~-----~l~~~l~~~g~~V~~l~r~   89 (198)
                      ++.|.|+|+.|++|+     .|+..|++.|.+|.+++-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            457899999999998     4677788899999999865

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=90.48  E-value=0.14  Score=39.24  Aligned_cols=32  Identities=19%  Similarity=0.330  Sum_probs=28.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRS   89 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~   89 (198)
                      --|+|+|+ |+-|..++.+|.++|++|.+|-+.
T Consensus         8 ~dvIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   39 (370)
T d3coxa1           8 VPALVIGS-GYGGAVAALRLTQAGIPTQIVEMG   39 (370)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCeEEEEeCC
Confidence            35899997 999999999999999999999874

>d2vjma1 c.123.1.1 (A:2-428) Formyl-CoA transferase {Oxalobacter formigenes [TaxId: 847]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Formyl-CoA transferase
species: Oxalobacter formigenes [TaxId: 847]

Probab=90.46  E-value=1.9  Score=33.39  Aligned_cols=108  Identities=11%  Similarity=0.103  Sum_probs=67.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCC--cc-------c------ccCCCCeEEEEccCCCHHH---
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS--SL-------R------DSWANNVIWHQGNLLSSDS---  114 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~--~~-------~------~~~~~~~~~~~~D~~d~~~---  114 (198)
                      +.++.+|+=.+ ...-|-...+.|++-|++|+=+.+....  ..       .      .....+=+.+.+|+.+++.   
T Consensus         3 PL~GirVld~~-~~~agp~~~~~LadlGAeVIkvE~p~~gd~~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g~~~   81 (427)
T d2vjma1           3 PLDGINVLDFT-HVQAGPACTQMMGFLGANVIKIERRGSGDMTRGWLQDKPNVDSLYFTMFNCNKRSIELDMKTPEGKEL   81 (427)
T ss_dssp             TTTTCEEEECC-CTTHHHHHHHHHHHTTCEEEEEECTTTCSGGGGSSCSSTTSCCHHHHTTCSSCEEEECCTTSHHHHHH
T ss_pred             CCCCCEEEEcC-ChhHHHHHHHHHHHhCCeEEEECCCCCCCcccccCCCCCCCccHHHHHhCCCCeEEEEeCcCHHHHHH
Confidence            45667777666 3566888889999999999998853211  00       0      0112345788999988764   


Q ss_pred             HHHHhcCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCC
Q 029125          115 WKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGV  171 (198)
Q Consensus       115 ~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~  171 (198)
                      +.++++.+|+||+|-.+....+  +...       .+.+++.+. ++||+|-+.||.
T Consensus        82 ~~~Lv~~aDv~i~n~~pg~~~r--lGL~-------~~~l~~~NP-~LI~~sisgfG~  128 (427)
T d2vjma1          82 LEQMIKKADVMVENFGPGALDR--MGFT-------WEYIQELNP-RVILASVKGYAE  128 (427)
T ss_dssp             HHHHHHHCSEEEECCSTTHHHH--TTCC-------HHHHHHHCT-TCEEEEEESSCT
T ss_pred             HHHHHHhCCeeeECCCcchHHH--cCCC-------chhhhhhCC-ccceeeeecccc
Confidence            6677789999999875421000  0000       233444454 799998876663

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=90.40  E-value=0.17  Score=35.53  Aligned_cols=32  Identities=22%  Similarity=0.264  Sum_probs=28.9

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      -|+|+|| |..|...+.++.+.|.+|.++.+..
T Consensus         4 DvvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~   35 (217)
T d1gesa1           4 DYIAIGG-GSGGIASINRAAMYGQKCALIEAKE   35 (217)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            4799998 9999999999999999999998753

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=90.30  E-value=0.24  Score=37.21  Aligned_cols=35  Identities=23%  Similarity=0.175  Sum_probs=30.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeec
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSR   88 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r   88 (198)
                      ..++++|+|-|- |.+|.++++.|.+.|.+|+.++-
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            357789999997 99999999999999999988763

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.22  E-value=0.11  Score=36.99  Aligned_cols=74  Identities=15%  Similarity=0.045  Sum_probs=48.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC-------CeEEEeecCCCCc------------cc---------ccCCCCeEEEEc
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG-------LTVASLSRSGRSS------------LR---------DSWANNVIWHQG  107 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g-------~~V~~l~r~~~~~------------~~---------~~~~~~~~~~~~  107 (198)
                      +.+|+|+|| |.-|.+.+.+|+++|       ++|.++.+.+..-            ..         .....++++...
T Consensus         2 p~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~~GG~~~~gi~p~~~~~~~~~~~~~~~~~~~g~~~~~~   80 (239)
T d1lqta2           2 PYYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGN   80 (239)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEES
T ss_pred             CcEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCCCCCCeeeeccCcccccchhhhhhhhhhhccCCceEEEE
Confidence            358999997 999999999999988       4799998864220            00         001234555443


Q ss_pred             -cCCCHHHHHHHhcCCCEEEEccc
Q 029125          108 -NLLSSDSWKEALDGVTAVISCVG  130 (198)
Q Consensus       108 -D~~d~~~~~~~~~~~d~vi~~ag  130 (198)
                       .+.....+.++..+.|.++.+.|
T Consensus        81 ~~v~~~~~~~~~~~~~~~v~~atG  104 (239)
T d1lqta2          81 VVVGEHVQPGELSERYDAVIYAVG  104 (239)
T ss_dssp             CCBTTTBCHHHHHHHSSEEEECCC
T ss_pred             EEeccccchhhhhccccceeeecC
Confidence             23233334555567899988776

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=90.21  E-value=0.16  Score=38.52  Aligned_cols=32  Identities=25%  Similarity=0.494  Sum_probs=28.9

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      -++|+|+ |.-|..++.+|++.|++|.+|-+..
T Consensus         6 DviIVGs-G~aG~v~A~~La~~G~kVlvLEaG~   37 (379)
T d2f5va1           6 DVVIVGS-GPIGCTYARELVGAGYKVAMFDIGE   37 (379)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cEEEECc-CHHHHHHHHHHhhCCCeEEEEecCC
Confidence            5899997 9999999999999999999998753

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=90.20  E-value=0.22  Score=32.89  Aligned_cols=35  Identities=17%  Similarity=0.253  Sum_probs=29.8

Q ss_pred             CCCeEEEEcCC---chhHHHHHHHHHHCCCeEEEeecC
Q 029125           55 PSEKLLVLGGN---GFVGSHICREALDRGLTVASLSRS   89 (198)
Q Consensus        55 ~~~~vlvtGat---G~iG~~l~~~l~~~g~~V~~l~r~   89 (198)
                      +.++|.|.|++   +..|..+++.|.+.|++++.+.-+
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~   49 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPR   49 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGG
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEec
Confidence            35789999997   679999999999999999887643

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.98  E-value=0.3  Score=33.76  Aligned_cols=66  Identities=21%  Similarity=0.242  Sum_probs=47.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV  129 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a  129 (198)
                      +.|+|.|.|= |.-|.+=+..|.+.|.+|++-.|...+........+++++        ++.++.+..|+|....
T Consensus        15 k~k~IaViGY-GsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v~--------~~~eA~~~aDiim~L~   80 (182)
T d1np3a2          15 QGKKVAIIGY-GSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA--------DVKTAVAAADVVMILT   80 (182)
T ss_dssp             HTSCEEEECC-SHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE--------CHHHHHHTCSEEEECS
T ss_pred             CCCEEEEEee-CcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhccccc--------cHHHHhhhcCeeeeec
Confidence            5789999996 9999999999999999999988875543332223444443        2456666777777655

>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB
species: Escherichia coli [TaxId: 562]

Probab=89.86  E-value=3.2  Score=31.70  Aligned_cols=109  Identities=12%  Similarity=0.125  Sum_probs=69.5

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCccc-------ccCCCCeEEEEccCCCHHH---HHHHhcC
Q 029125           52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDS---WKEALDG  121 (198)
Q Consensus        52 ~~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~-------~~~~~~~~~~~~D~~d~~~---~~~~~~~  121 (198)
                      .+..+.+|+=.+ ...-|-...+.|++-|++|+=+.+.......       .....+-+.+..|+.+++.   +.++++.
T Consensus         7 gPL~GirVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~r~~~~~~~~~n~~K~si~ldl~~~~G~~~~~~Lv~~   85 (402)
T d1xk7a1           7 GPLAGLRVVFSG-IEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMET   85 (402)
T ss_dssp             STTTTCEEEEEC-CSSHHHHHHHHHHHTTCEEEEEECSSSCCGGGGSSSHHHHHTTTCEEEEECTTSHHHHHHHHHHHTT
T ss_pred             cCCCCCEEEEeC-ChhHHHHHHHHHHHhCCeEEEECCCCCCCccccCCchhHHhCCCCeEEEEeCcCHHHHHHHHHHHhh
Confidence            456777887666 3566888899999999999988753311110       1113456889999988654   5577789


Q ss_pred             CCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCC
Q 029125          122 VTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGV  171 (198)
Q Consensus       122 ~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~  171 (198)
                      +|+||+|--+.....  +   ..+    .+.+++.+. ++||+|-+.||.
T Consensus        86 aDv~i~n~rpg~~~~--l---Gl~----~~~L~~~nP-~lI~~sisgfG~  125 (402)
T d1xk7a1          86 TDIFIEASKGPAFAR--R---GIT----DEVLWQHNP-KLVIAHLSGFGQ  125 (402)
T ss_dssp             CSEEEEECSSSHHHH--T---TCC----HHHHHHHCT-TCEEEEEESSCS
T ss_pred             cCCceeeeccccccc--c---ccc----ccchhhccc-cccceeeecccC
Confidence            999999865321000  0   000    233444454 799998877774

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=89.71  E-value=1  Score=30.67  Aligned_cols=76  Identities=16%  Similarity=0.197  Sum_probs=43.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCC-CeEEEeecC-CCCcccccCCCCeEEEEcc-----------CCCHHHHHHHhcCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRS-GRSSLRDSWANNVIWHQGN-----------LLSSDSWKEALDGV  122 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g-~~V~~l~r~-~~~~~~~~~~~~~~~~~~D-----------~~d~~~~~~~~~~~  122 (198)
                      |++|.|-| -|-||+.+++.+..++ .+|+.+.-. +..........+......+           +.-...+..+++++
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~v   79 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEA   79 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTC
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCC
Confidence            67899998 5999999999998876 566665432 2211000000011111111           00011244556789


Q ss_pred             CEEEEccccC
Q 029125          123 TAVISCVGGF  132 (198)
Q Consensus       123 d~vi~~ag~~  132 (198)
                      |+||-|.|.+
T Consensus        80 DvViEcTG~f   89 (171)
T d1cf2o1          80 DIVIDCTPEG   89 (171)
T ss_dssp             SEEEECCSTT
T ss_pred             CEEEEccCCC
Confidence            9999999874

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=89.69  E-value=0.18  Score=37.86  Aligned_cols=32  Identities=25%  Similarity=0.375  Sum_probs=29.4

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      -|+|+|+ |..|...+..|+++|.+|+++.+.+
T Consensus        25 DVvVIG~-G~aGl~aA~~la~~G~~V~llEk~~   56 (322)
T d1d4ca2          25 DVVIIGS-GGAGLAAAVSARDAGAKVILLEKEP   56 (322)
T ss_dssp             SEEEECS-SHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            5999997 9999999999999999999998764

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.66  E-value=0.17  Score=35.11  Aligned_cols=34  Identities=15%  Similarity=0.084  Sum_probs=30.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      .++|+|+|| |..|...+..+.+.|.+|+++.+..
T Consensus         5 ~~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~~   38 (192)
T d1vdca1           5 NTRLCIVGS-GPAAHTAAIYAARAELKPLLFEGWM   38 (192)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred             cceEEEECC-CHHHHHHHHHHHHcCCcEEEEEeec
Confidence            468999998 9999999999999999999998654

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=89.55  E-value=1.2  Score=31.16  Aligned_cols=76  Identities=11%  Similarity=0.059  Sum_probs=47.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCCCcccc------------cCCCCeEEEEccCCCHHHHHHHhc--
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD------------SWANNVIWHQGNLLSSDSWKEALD--  120 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~~~~~~------------~~~~~~~~~~~D~~d~~~~~~~~~--  120 (198)
                      ..|+|++.|. +..+..+++.|++.|++|.++...+++....            ....++.....+..+.+...+.++  
T Consensus         2 ~~mKI~f~G~-~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (206)
T d1fmta2           2 ESLRIIFAGT-PDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAEL   80 (206)
T ss_dssp             CCCEEEEEEC-SHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHHHT
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhhhccCccccccccccchhhHHHHhhh
Confidence            3578999985 7788899999999999987765443221100            001344555555555555556555  


Q ss_pred             CCCEEEEcccc
Q 029125          121 GVTAVISCVGG  131 (198)
Q Consensus       121 ~~d~vi~~ag~  131 (198)
                      ++|+++...+.
T Consensus        81 ~~d~~v~~~~~   91 (206)
T d1fmta2          81 QADVMVVVAYG   91 (206)
T ss_dssp             TCSEEEEESCC
T ss_pred             cceEEEeeccc
Confidence            57888776653

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.49  E-value=0.19  Score=34.22  Aligned_cols=70  Identities=14%  Similarity=-0.033  Sum_probs=41.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHH-H-C----CCeEEEeecCCCCcccc------cCCCCeEEEEccCCCHHHHHHHhcCCCE
Q 029125           57 EKLLVLGGNGFVGSHICREAL-D-R----GLTVASLSRSGRSSLRD------SWANNVIWHQGNLLSSDSWKEALDGVTA  124 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~-~-~----g~~V~~l~r~~~~~~~~------~~~~~~~~~~~D~~d~~~~~~~~~~~d~  124 (198)
                      +||.|.|| |.+|..++-..+ . .    ..++.++|.++.+....      .......+.. . +   +..+.+++.|+
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~-t-~---~~~~~l~~aDv   74 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLI-S-D---TFEGAVVDAKY   74 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEE-C-S---SHHHHHTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEE-e-c---CcccccCCCCE
Confidence            58999998 557765553322 2 1    35899999876542110      0012222222 1 1   13567889999


Q ss_pred             EEEccccC
Q 029125          125 VISCVGGF  132 (198)
Q Consensus       125 vi~~ag~~  132 (198)
                      ||..++..
T Consensus        75 VVita~~~   82 (162)
T d1up7a1          75 VIFQFRPG   82 (162)
T ss_dssp             EEECCCTT
T ss_pred             EEEecccC
Confidence            99999864

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.42  E-value=0.2  Score=36.94  Aligned_cols=34  Identities=18%  Similarity=0.179  Sum_probs=30.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEee
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLS   87 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~   87 (198)
                      ..++++|+|-|- |.+|.++++.|.+.|.+|+.++
T Consensus        33 ~l~g~~v~IQGf-GnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          33 TLVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CSTTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEe
Confidence            456789999995 9999999999999999998775

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=89.39  E-value=0.13  Score=35.57  Aligned_cols=35  Identities=26%  Similarity=0.278  Sum_probs=30.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      +.++|+|+|| |..|..-+..+.+.|.+|+++.+..
T Consensus         4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEeec
Confidence            3468999998 9999999999999999999998654

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=89.13  E-value=0.21  Score=35.02  Aligned_cols=32  Identities=22%  Similarity=0.473  Sum_probs=29.1

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      -|+|+|| |..|...+..+.+.|.+|.++.++.
T Consensus         5 DvvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           5 DVVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            5899998 9999999999999999999998754

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.51  E-value=0.22  Score=34.33  Aligned_cols=94  Identities=17%  Similarity=0.143  Sum_probs=55.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHC-CCeEEEe-ecCCCCccc--c--cCCCCeEEEEccCCCHHHHHHHh--cCCCEEEEc
Q 029125           57 EKLLVLGGNGFVGSHICREALDR-GLTVASL-SRSGRSSLR--D--SWANNVIWHQGNLLSSDSWKEAL--DGVTAVISC  128 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l-~r~~~~~~~--~--~~~~~~~~~~~D~~d~~~~~~~~--~~~d~vi~~  128 (198)
                      .+|.|+|. |.+|+..++.+... +.+|+.+ ++++++...  .  ..+....++    .|   +++++  .++|+|+-+
T Consensus         2 iki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~----~~---~~~ll~~~~iD~v~I~   73 (184)
T d1ydwa1           2 IRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIH----GS---YESLLEDPEIDALYVP   73 (184)
T ss_dssp             EEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEE----SS---HHHHHHCTTCCEEEEC
T ss_pred             eEEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeec----Cc---HHHhhhccccceeeec
Confidence            58999996 88999999888776 5677754 554332111  1  111222221    23   34444  368999876


Q ss_pred             cccCC----------CC-----ccceehhhHHHHHHHHHHHHcCC
Q 029125          129 VGGFG----------SN-----SYMYKINGTANINAIRAASEKGV  158 (198)
Q Consensus       129 ag~~~----------~~-----~~~~~~n~~~~~~~~~a~~~~~~  158 (198)
                      .....          ..     +.....+......+++.+++.++
T Consensus        74 tp~~~h~~~~~~~l~~g~~v~~EKP~~~~~~e~~~l~~~~~~~~~  118 (184)
T d1ydwa1          74 LPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGV  118 (184)
T ss_dssp             CCGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTC
T ss_pred             ccchhhcchhhhhhhccceeecccccccCHHHHHHHHHHHHhhCC
Confidence            64321          11     22334567777788888887765

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=88.20  E-value=0.35  Score=37.12  Aligned_cols=32  Identities=25%  Similarity=0.264  Sum_probs=23.9

Q ss_pred             CeEEEEcC------CchhH---HHHHHHHHHCCCeEEEeec
Q 029125           57 EKLLVLGG------NGFVG---SHICREALDRGLTVASLSR   88 (198)
Q Consensus        57 ~~vlvtGa------tG~iG---~~l~~~l~~~g~~V~~l~r   88 (198)
                      |||++++.      +|++|   ..|++.|.++||+|.++..
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence            46666553      46666   4578999999999999874

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=88.13  E-value=0.29  Score=33.18  Aligned_cols=32  Identities=16%  Similarity=0.321  Sum_probs=28.6

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      .|+|.|| |..|...+..+.+.|.+|.++.++.
T Consensus         3 DViIIGg-GpaGl~AAi~aar~G~~v~iie~~~   34 (184)
T d1fl2a1           3 DVLIVGS-GPAGAAAAIYSARKGIRTGLMGERF   34 (184)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTCCEEEECSST
T ss_pred             cEEEECc-CHHHHHHHHHHHHcCCeEEEEEEec
Confidence            4799998 9999999999999999999998753

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=87.77  E-value=0.26  Score=33.35  Aligned_cols=96  Identities=13%  Similarity=-0.012  Sum_probs=52.8

Q ss_pred             CeEEEEcCCchhHHH-HHHHHHHC-CCeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHh-cCCCEEEEccccCC
Q 029125           57 EKLLVLGGNGFVGSH-ICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL-DGVTAVISCVGGFG  133 (198)
Q Consensus        57 ~~vlvtGatG~iG~~-l~~~l~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~d~vi~~ag~~~  133 (198)
                      ++|.|+|+ |.+|+. .+..|.+. +.++.++++++.........-++..+.   .|.+   +++ .++|+|+-+.....
T Consensus         2 irvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~---~~~~---~ll~~~iD~V~I~tp~~~   74 (167)
T d1xeaa1           2 LKIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATC---TDYR---DVLQYGVDAVMIHAATDV   74 (167)
T ss_dssp             EEEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCC---SSTT---GGGGGCCSEEEECSCGGG
T ss_pred             eEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhccccccc---ccHH---Hhcccccceecccccccc
Confidence            58999996 888865 45555555 457776666543311100001111111   2222   223 36899887665321


Q ss_pred             ----------CC-----ccceehhhHHHHHHHHHHHHcCCC
Q 029125          134 ----------SN-----SYMYKINGTANINAIRAASEKGVK  159 (198)
Q Consensus       134 ----------~~-----~~~~~~n~~~~~~~~~a~~~~~~~  159 (198)
                                ..     +.....+......+++++++.+..
T Consensus        75 H~~~~~~al~~gk~V~~EKP~~~~~~e~~~l~~~a~~~~~~  115 (167)
T d1xeaa1          75 HSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQP  115 (167)
T ss_dssp             HHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred             cccccccccccccccccCCCCcCCHHHHHHHHHHHHHcCCE
Confidence                      00     223356777778888988888764

>d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Hypothetical protein YfdW
species: Escherichia coli [TaxId: 562]

Probab=87.51  E-value=4.8  Score=30.78  Aligned_cols=108  Identities=13%  Similarity=0.062  Sum_probs=66.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC-Cc-c------c-------ccCCCCeEEEEccCCCHHH---
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR-SS-L------R-------DSWANNVIWHQGNLLSSDS---  114 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~-~~-~------~-------~~~~~~~~~~~~D~~d~~~---  114 (198)
                      +.++.+|+=.+ ...-|-...+.|++-|++|+=+-+... .. .      .       .....+=+.+..|+.+++.   
T Consensus         4 PL~GirVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g~~~   82 (417)
T d1q7ea_           4 PLQGIKVLDFT-GVQSGPSCTQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGKEV   82 (417)
T ss_dssp             TTTTCEEEECC-CTTHHHHHHHHHHHTTCEEEEEECTTTCCGGGTTTCSSTTSCCHHHHTTCTTCEEEECCTTSHHHHHH
T ss_pred             CCCCCEEEEcC-ChhHHHHHHHHHHHhCCeEEEECCCCCCCchhccCCCCCCCccHHHHHhCCCCeEEEEeCcCHHHHHH
Confidence            45666776665 356688888899999999999875321 10 0      0       1112355789999988755   


Q ss_pred             HHHHhcCCCEEEEccccCCCCccceehhhHHHHHHHHHHHHcCCCEEEEeeccccCC
Q 029125          115 WKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGV  171 (198)
Q Consensus       115 ~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~a~~~~~~~~~v~~Ss~~~~~  171 (198)
                      +.+++++.|+||+|--+......-  ..       .+.+++.+. ++||+|-+.||.
T Consensus        83 ~~~Li~~aDv~i~n~~pg~~~rlG--l~-------~~~l~~~nP-~lI~~sisgfG~  129 (417)
T d1q7ea_          83 MEKLIREADILVENFHPGAIDHMG--FT-------WEHIQEINP-RLIFGSIKGFDE  129 (417)
T ss_dssp             HHHHHHHCSEEEECCCC---------CC-------HHHHHHHCT-TCEEEEEESSCT
T ss_pred             HHHHHhcCcccEeccCCCcHhhcC--CC-------HHHHHhhCC-CEEEEeeecccc
Confidence            446778999999987542111000  00       123344443 789998777663

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.45  E-value=0.41  Score=33.59  Aligned_cols=32  Identities=25%  Similarity=0.521  Sum_probs=29.1

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      -|+|+|| |..|...+.++++.|.+|.++.++.
T Consensus         7 DviVIG~-GpAGl~aA~~aa~~G~kV~lie~~~   38 (233)
T d1v59a1           7 DVVIIGG-GPAGYVAAIKAAQLGFNTACVEKRG   38 (233)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            5899998 9999999999999999999998754

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=87.43  E-value=0.25  Score=36.97  Aligned_cols=33  Identities=24%  Similarity=0.371  Sum_probs=29.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      --|+|+|+ |..|...+..++++|.+|+++.+.+
T Consensus        20 ~DVvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~~   52 (317)
T d1qo8a2          20 TQVLVVGA-GSAGFNASLAAKKAGANVILVDKAP   52 (317)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             cCEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            46999997 9999999999999999999998764

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=87.06  E-value=0.52  Score=34.93  Aligned_cols=33  Identities=27%  Similarity=0.568  Sum_probs=22.7

Q ss_pred             CeEEEEcC-C-chh--HHHHHHHHHHCCCeEEEeecC
Q 029125           57 EKLLVLGG-N-GFV--GSHICREALDRGLTVASLSRS   89 (198)
Q Consensus        57 ~~vlvtGa-t-G~i--G~~l~~~l~~~g~~V~~l~r~   89 (198)
                      |||+|++| | |-+  ..+|+++|.++|++|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            57777764 3 222  234889999999999887643

>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.97  E-value=0.29  Score=34.54  Aligned_cols=33  Identities=24%  Similarity=0.319  Sum_probs=27.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHHCCC--eEEEeecC
Q 029125           56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRS   89 (198)
Q Consensus        56 ~~~vlvtGatG~iG~~l~~~l~~~g~--~V~~l~r~   89 (198)
                      ...++|.|| |++|..++..|.+.|.  +|+++++.
T Consensus         4 ~~~~vIvG~-G~aG~~~A~~Lr~~~~~~~I~li~~e   38 (213)
T d1m6ia1           4 HVPFLLIGG-GTAAFAAARSIRARDPGARVLIVSED   38 (213)
T ss_dssp             EEEEEEESC-SHHHHHHHHHHHHHSTTCEEEEEESS
T ss_pred             CCCEEEECC-cHHHHHHHHHHHhcCCCCcEEEEeCC
Confidence            356788987 9999999999998774  68888764

>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain
species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]

Probab=86.27  E-value=0.45  Score=36.30  Aligned_cols=32  Identities=25%  Similarity=0.383  Sum_probs=28.5

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      -++|+|+ |.-|.-++.+|.++|.+|.+|-+..
T Consensus         4 D~IIVGs-G~aG~v~A~rLae~g~~VlvLEaG~   35 (360)
T d1kdga1           4 DYIIVGA-GPGGIIAADRLSEAGKKVLLLERGG   35 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHhhCCCeEEEEEccC
Confidence            4789997 8999999999999999999998764

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=85.80  E-value=0.43  Score=35.64  Aligned_cols=32  Identities=31%  Similarity=0.488  Sum_probs=28.5

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      -|+|+|+ |..|...+..++++|.+|+++...+
T Consensus         7 DVvVIG~-G~AGl~AAl~aa~~G~~V~liEK~~   38 (336)
T d2bs2a2           7 DSLVIGG-GLAGLRAAVATQQKGLSTIVLSLIP   38 (336)
T ss_dssp             SEEEECC-SHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEecCC
Confidence            3899997 9999999999999999999998654

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.54  E-value=0.73  Score=33.32  Aligned_cols=34  Identities=18%  Similarity=0.312  Sum_probs=28.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHC-CCeEEEee
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDR-GLTVASLS   87 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~-g~~V~~l~   87 (198)
                      ..++++|+|-|- |.+|.++++.|.+. |.+|+.+.
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence            357889999997 99999999999865 89888775

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.41  E-value=0.59  Score=32.52  Aligned_cols=31  Identities=32%  Similarity=0.434  Sum_probs=27.9

Q ss_pred             EEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           59 LLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        59 vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      ++|+|| |..|...+..+.+.|.+|.++.+..
T Consensus         6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~~   36 (221)
T d3grsa1           6 YLVIGG-GSGGLASARRAAELGARAAVVESHK   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            788897 9999999999999999999998643

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=85.39  E-value=0.55  Score=32.83  Aligned_cols=38  Identities=13%  Similarity=0.245  Sum_probs=33.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      ..++|+|+|.|+ |..|.-++..+.+.+.+++.+.|+..
T Consensus        29 ~~~gK~V~VvG~-G~Sa~dia~~~~~~~~~~~~~~~~~~   66 (235)
T d1w4xa2          29 DFSGQRVGVIGT-GSSGIQVSPQIAKQAAELFVFQRTPH   66 (235)
T ss_dssp             CCBTCEEEEECC-SHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred             CCCCCEEEEECC-CccHHHHHHHHHhhhccccccccccc
Confidence            357899999996 89999999999999999988888754

>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=84.91  E-value=0.28  Score=32.80  Aligned_cols=30  Identities=20%  Similarity=0.320  Sum_probs=25.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHHCCCeEE
Q 029125           54 PPSEKLLVLGGNGFVGSHICREALDRGLTVA   84 (198)
Q Consensus        54 ~~~~~vlvtGatG~iG~~l~~~l~~~g~~V~   84 (198)
                      ..+++|+|.|| |++|..++..+.+.|.++.
T Consensus        27 ~~gkrVvVIGg-G~~g~d~a~~~~r~G~~~~   56 (162)
T d1ps9a2          27 PVGNKVAIIGC-GGIGFDTAMYLSQPGESTS   56 (162)
T ss_dssp             CCCSEEEEECC-HHHHHHHHHHHTCCSSCGG
T ss_pred             ccCCceEEEcC-chhHHHHHHHHHHcCCccc
Confidence            35789999998 9999999999999997543

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=84.77  E-value=0.66  Score=32.17  Aligned_cols=32  Identities=25%  Similarity=0.302  Sum_probs=28.5

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      .++|+|| |..|...+..+.+.|.+|.++.+..
T Consensus         5 DviVIG~-GpaGl~aA~~aar~G~kV~vIEk~~   36 (223)
T d1ebda1           5 ETLVVGA-GPGGYVAAIRAAQLGQKVTIVEKGN   36 (223)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCEEEEEecCC
Confidence            4789997 9999999999999999999998754

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=84.68  E-value=0.95  Score=30.22  Aligned_cols=94  Identities=13%  Similarity=0.002  Sum_probs=52.2

Q ss_pred             CeEEEEcCCchhHHH-HHHHHHHC-CCeEEEe-ecCCCCcccccCCCCeEEEEccCCCHHHHHHHhcCCCEEEEccccCC
Q 029125           57 EKLLVLGGNGFVGSH-ICREALDR-GLTVASL-SRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG  133 (198)
Q Consensus        57 ~~vlvtGatG~iG~~-l~~~l~~~-g~~V~~l-~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~  133 (198)
                      ++|.|.|. |.+|.. .+..+... +.+++.+ ++++..........++.     ..+  .+.++.+++|+|+-+.-...
T Consensus         2 iri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~-----~~~--~~~~l~~~~D~V~I~tp~~~   73 (164)
T d1tlta1           2 LRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIP-----YAD--SLSSLAASCDAVFVHSSTAS   73 (164)
T ss_dssp             EEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCC-----BCS--SHHHHHTTCSEEEECSCTTH
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhccccc-----ccc--cchhhhhhcccccccccchh
Confidence            58999995 899975 45555544 5676654 45443321110001111     221  23444578999987654211


Q ss_pred             ----------CC-----ccceehhhHHHHHHHHHHHHcCC
Q 029125          134 ----------SN-----SYMYKINGTANINAIRAASEKGV  158 (198)
Q Consensus       134 ----------~~-----~~~~~~n~~~~~~~~~a~~~~~~  158 (198)
                                ..     +...-.+..-...+++++++.++
T Consensus        74 h~~~~~~al~~gk~V~~EKPla~~~~e~~~l~~~a~~~~~  113 (164)
T d1tlta1          74 HFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKL  113 (164)
T ss_dssp             HHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTC
T ss_pred             ccccccccccccceeeccccccCCHHHHHHHHHHHHHcCC
Confidence                      01     22234666777788888888775

>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=84.66  E-value=0.51  Score=34.46  Aligned_cols=36  Identities=22%  Similarity=0.246  Sum_probs=27.5

Q ss_pred             CCeEEEEcCCchhHH-----HHHHHHHHCCCeEEEeecCCC
Q 029125           56 SEKLLVLGGNGFVGS-----HICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        56 ~~~vlvtGatG~iG~-----~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      +.+++++-|-|++|+     +++..|+++|.+|.+++-++.
T Consensus         7 ~p~~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD~Dp~   47 (296)
T d1ihua1           7 IPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDPA   47 (296)
T ss_dssp             CCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCeEEEEECCCcChHHHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            445555555799998     477888899999999998753

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=84.58  E-value=0.47  Score=33.20  Aligned_cols=32  Identities=25%  Similarity=0.339  Sum_probs=28.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRS   89 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~   89 (198)
                      ..++|+|| |..|...+..+.+.|.+|.++.+.
T Consensus         6 ~DlvVIG~-GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           6 TTLLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             cCEEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            36899997 999999999999999999999864

>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=84.56  E-value=1.3  Score=31.38  Aligned_cols=40  Identities=25%  Similarity=0.291  Sum_probs=32.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHHC--------------------C-CeEEEeecCCCCc
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALDR--------------------G-LTVASLSRSGRSS   93 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~~--------------------g-~~V~~l~r~~~~~   93 (198)
                      ....++|+|+|+ |.++.=+++.|++.                    | .+|+++.|+...+
T Consensus        36 ~~~gk~VvVIGg-GNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg~~~   96 (225)
T d1cjca1          36 DLSCDTAVILGQ-GNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQ   96 (225)
T ss_dssp             CTTSSEEEEESC-SHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGG
T ss_pred             cccCceEEEECC-chhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcChHh
Confidence            346789999997 99999999998873                    5 5899999986543

>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=84.30  E-value=1.5  Score=30.79  Aligned_cols=39  Identities=28%  Similarity=0.423  Sum_probs=31.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHH--------------------HCC-CeEEEeecCCCC
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREAL--------------------DRG-LTVASLSRSGRS   92 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~--------------------~~g-~~V~~l~r~~~~   92 (198)
                      ...+++|+|+|+ |.++.=+++.|+                    +.| .+|+++.|+...
T Consensus        36 ~~~gk~VvVIGg-GNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg~~   95 (216)
T d1lqta1          36 DLSGARAVVIGN-GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL   95 (216)
T ss_dssp             CCCSSEEEEECC-SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred             cccCceEEEECC-CchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECChH
Confidence            345789999997 999999988777                    456 489999998654

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=83.90  E-value=0.67  Score=35.73  Aligned_cols=33  Identities=15%  Similarity=0.366  Sum_probs=29.2

Q ss_pred             eEEEEcCCchhHHHHHHHHHH------CCCeEEEeecCCC
Q 029125           58 KLLVLGGNGFVGSHICREALD------RGLTVASLSRSGR   91 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~------~g~~V~~l~r~~~   91 (198)
                      -|+|+|| |--|...+..|++      +|.+|.++.+...
T Consensus        34 DViIVGg-GPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~~   72 (380)
T d2gmha1          34 DVVIVGA-GPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH   72 (380)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECSSSS
T ss_pred             CEEEECC-CHHHHHHHHHHHhhhhhhcCCCEEEEEcCCCC
Confidence            6999998 9999999999886      8999999998754

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=83.60  E-value=0.8  Score=32.18  Aligned_cols=32  Identities=41%  Similarity=0.521  Sum_probs=28.9

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      -|+|+|| |..|...+..+.+.|.+|.++.+.+
T Consensus         8 DviIIG~-GPaGlsaA~~aa~~G~~V~viE~~~   39 (229)
T d1ojta1           8 DVVVLGG-GPGGYSAAFAAADEGLKVAIVERYK   39 (229)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            4789997 9999999999999999999998754

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.32  E-value=0.76  Score=32.28  Aligned_cols=32  Identities=28%  Similarity=0.357  Sum_probs=28.6

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      -|+|+|| |..|...+.++++.|.+|.++...+
T Consensus         5 DviVIG~-GpaGl~aA~~aa~~G~kV~viE~~~   36 (235)
T d1h6va1           5 DLIIIGG-GSGGLAAAKEAAKFDKKVMVLDFVT   36 (235)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGCCCEEEECCCC
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            4789997 9999999999999999999998654

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.25  E-value=1.6  Score=29.31  Aligned_cols=94  Identities=20%  Similarity=0.212  Sum_probs=52.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCC--CeEEEeecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEccc
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVG  130 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag  130 (198)
                      .+.+|+|.|. |.+|+..++.|.+..  ..+.+.+....+....  ......     .+   ++++++  ++|+|+-+..
T Consensus         6 ~k~kv~iIG~-G~~g~~h~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~---~~e~l~~~~iD~V~I~tp   74 (172)
T d1lc0a1           6 GKFGVVVVGV-GRAGSVRLRDLKDPRSAAFLNLIGFVSRRELGS--LDEVRQ-----IS---LEDALRSQEIDVAYICSE   74 (172)
T ss_dssp             CSEEEEEECC-SHHHHHHHHHHTSHHHHTTEEEEEEECSSCCCE--ETTEEB-----CC---HHHHHHCSSEEEEEECSC
T ss_pred             CCcEEEEEcC-CHHHHHHHHHHHhCCCCcEEEEEeccchHHHHH--hhccCc-----CC---HHHHHhCCCcchhhhccc
Confidence            4568999996 999998888776532  2233333222221111  111111     12   445554  5788887664


Q ss_pred             cCC----------CC-----ccceehhhHHHHHHHHHHHHcCCC
Q 029125          131 GFG----------SN-----SYMYKINGTANINAIRAASEKGVK  159 (198)
Q Consensus       131 ~~~----------~~-----~~~~~~n~~~~~~~~~a~~~~~~~  159 (198)
                      ...          ..     +...-.+......+++++++.+..
T Consensus        75 ~~~H~~~~~~al~~gk~V~~EKP~a~~~~e~~~l~~~a~~~~~~  118 (172)
T d1lc0a1          75 SSSHEDYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRV  118 (172)
T ss_dssp             GGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCC
T ss_pred             ccccccccccccccchhhhcCCCccccHHHHHHHHHHHHHcCCe
Confidence            321          00     222346777778888888888753

>d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=82.00  E-value=1.2  Score=28.52  Aligned_cols=36  Identities=19%  Similarity=0.212  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCCC
Q 029125           55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR   91 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~~   91 (198)
                      ++++|+|.|+ |..+..-+..|.+-..+|+++.|+..
T Consensus        26 ~~k~V~VvGg-GdsA~e~A~~L~~~a~~V~li~r~~~   61 (126)
T d1trba2          26 RNQKVAVIGG-GNTAVEEALYLSNIASEVHLIHRRDG   61 (126)
T ss_dssp             TTSEEEEECS-SHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHhhcCCcEEEEeeccc
Confidence            6789999998 89999999999988889999998754

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=81.56  E-value=0.79  Score=31.73  Aligned_cols=32  Identities=22%  Similarity=0.329  Sum_probs=28.6

Q ss_pred             eEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        58 ~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      -|+|+|| |.-|...+.++.+.|.+|.++.+..
T Consensus         5 DviIIGg-GpAGl~aA~~aar~G~~V~viE~~~   36 (229)
T d3lada1           5 DVIVIGA-GPGGYVAAIKSAQLGLKTALIEKYK   36 (229)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCeEEEEeccc
Confidence            4889997 9999999999999999999998753

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.30  E-value=1.1  Score=32.31  Aligned_cols=34  Identities=26%  Similarity=0.272  Sum_probs=28.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHH-CCCeEEEee
Q 029125           53 PPPSEKLLVLGGNGFVGSHICREALD-RGLTVASLS   87 (198)
Q Consensus        53 ~~~~~~vlvtGatG~iG~~l~~~l~~-~g~~V~~l~   87 (198)
                      ..++++|+|-|- |.+|.++++.|.+ .|.+|+.++
T Consensus        28 ~l~g~~vaIqG~-GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQGF-GNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CTTTCEEEEECC-SHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCCceEEee
Confidence            356789999884 9999999999975 599998776

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=81.18  E-value=1  Score=32.33  Aligned_cols=30  Identities=37%  Similarity=0.526  Sum_probs=27.6

Q ss_pred             EEEEcCCchhHHHHHHHHHHCCCeEEEeecC
Q 029125           59 LLVLGGNGFVGSHICREALDRGLTVASLSRS   89 (198)
Q Consensus        59 vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~   89 (198)
                      ++|+|| |..|...+.++++.|.+|.++.+.
T Consensus         4 viVIG~-G~aG~~aA~~aa~~G~~V~liE~~   33 (259)
T d1onfa1           4 LIVIGG-GSGGMAAARRAARHNAKVALVEKS   33 (259)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEecC
Confidence            689997 899999999999999999999875

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=80.97  E-value=0.49  Score=33.65  Aligned_cols=99  Identities=11%  Similarity=-0.003  Sum_probs=55.0

Q ss_pred             CCCeEEEEcCCchhHH-HHHHHHHHC-CCeEEEe-ecCCCCccc--ccC-CCCeEEEEccCCCHHHHHHHhc--CCCEEE
Q 029125           55 PSEKLLVLGGNGFVGS-HICREALDR-GLTVASL-SRSGRSSLR--DSW-ANNVIWHQGNLLSSDSWKEALD--GVTAVI  126 (198)
Q Consensus        55 ~~~~vlvtGatG~iG~-~l~~~l~~~-g~~V~~l-~r~~~~~~~--~~~-~~~~~~~~~D~~d~~~~~~~~~--~~d~vi  126 (198)
                      ++-+|.|+|. |.+|+ +++..+... +.+|+.+ +|++++...  ... .+...+.  ...|   ++++++  ++|+|+
T Consensus        32 ~~iriaiIG~-G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~--~~~d---~~ell~~~~iD~V~  105 (221)
T d1h6da1          32 RRFGYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIY--DYSN---FDKIAKDPKIDAVY  105 (221)
T ss_dssp             CCEEEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEE--CSSS---GGGGGGCTTCCEEE
T ss_pred             CCEEEEEEcC-cHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhcccccccc--ccCc---hhhhcccccceeee
Confidence            4558999996 89996 566665554 5677744 554433111  111 1111111  1223   344454  589998


Q ss_pred             EccccCC----------C-----CccceehhhHHHHHHHHHHHHcCCC
Q 029125          127 SCVGGFG----------S-----NSYMYKINGTANINAIRAASEKGVK  159 (198)
Q Consensus       127 ~~ag~~~----------~-----~~~~~~~n~~~~~~~~~a~~~~~~~  159 (198)
                      -+.....          .     -++....+......+++.+++.++.
T Consensus       106 I~tp~~~H~~~~~~al~~gk~v~~EKPla~~~~e~~~l~~~a~~~~~~  153 (221)
T d1h6da1         106 IILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKK  153 (221)
T ss_dssp             ECSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCC
T ss_pred             eccchhhhhhHHHHhhhcchhhhcCCCccCCHHHHHHHHHHHHhcCCc
Confidence            7665321          0     0223456777788889999888763

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=80.86  E-value=1.5  Score=26.55  Aligned_cols=30  Identities=20%  Similarity=0.202  Sum_probs=25.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEee
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLS   87 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~   87 (198)
                      |||||.|. |+=--+|+..|.+...+|+|.-
T Consensus         1 MkVLviGs-GgREHAia~~l~~s~~~v~~~p   30 (90)
T d1vkza2           1 VRVHILGS-GGREHAIGWAFAKQGYEVHFYP   30 (90)
T ss_dssp             CEEEEEEC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHhcCCCeEEEec
Confidence            68999997 6666789999998889999874

>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=80.28  E-value=1.2  Score=31.96  Aligned_cols=33  Identities=18%  Similarity=0.130  Sum_probs=29.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHHCCCeEEEeecCC
Q 029125           57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSG   90 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l~~~l~~~g~~V~~l~r~~   90 (198)
                      -.++|+|| |..|...+..+.+.|.+|.++.+.+
T Consensus        43 yDvvVIGg-G~aG~~aA~~~a~~G~kv~vve~~~   75 (261)
T d1mo9a1          43 YDAIFIGG-GAAGRFGSAYLRAMGGRQLIVDRWP   75 (261)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            36899987 9999999999999999999998754

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=80.23  E-value=1.6  Score=29.57  Aligned_cols=96  Identities=11%  Similarity=0.011  Sum_probs=52.2

Q ss_pred             CeEEEEcCCchhHHHH-HHHHHHCC--CeEEEe-ecCCCCcccccCCCCeEEEEccCCCHHHHHHHhc--CCCEEEEccc
Q 029125           57 EKLLVLGGNGFVGSHI-CREALDRG--LTVASL-SRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVG  130 (198)
Q Consensus        57 ~~vlvtGatG~iG~~l-~~~l~~~g--~~V~~l-~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag  130 (198)
                      .+|.|.|. |.+|+.+ +..+.+.+  .+|+++ ++++.........-+...+.   .|   ++++++  ++|+|+-+..
T Consensus         4 irigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~---~~---~~ell~~~~id~v~I~tp   76 (181)
T d1zh8a1           4 IRLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF---DS---YEELLESGLVDAVDLTLP   76 (181)
T ss_dssp             EEEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE---SC---HHHHHHSSCCSEEEECCC
T ss_pred             cEEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccccccee---ee---eeccccccccceeecccc
Confidence            48899995 8999864 56666543  466654 44432211100001111121   23   445554  5899987654


Q ss_pred             cCC----------CC-----ccceehhhHHHHHHHHHHHHcCCC
Q 029125          131 GFG----------SN-----SYMYKINGTANINAIRAASEKGVK  159 (198)
Q Consensus       131 ~~~----------~~-----~~~~~~n~~~~~~~~~a~~~~~~~  159 (198)
                      ...          ..     ++..-.+......+++.+++.+..
T Consensus        77 ~~~h~~~~~~al~~gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~  120 (181)
T d1zh8a1          77 VELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKT  120 (181)
T ss_dssp             GGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSC
T ss_pred             ccccccccccccccchhhhcCCCCcCCHHHHHHHHHHHHHhCCe
Confidence            321          00     223345677777888888887764