Citrus Sinensis ID: 029150

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------20
Protein Sequence
MINTCVLQSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPAKKDDGEKKENKDADKGGDKKAKEAAPATDKGGEKKEKEAAAAGGGDGGKVEVHKMEYYGYPYPPAPSYWYDNHVYGQSYPMENQHQVVYANQGYPPQMHHAPPMYHAPQMFSDENPNACSVM
Secondary Structure (PSIPRED)
cccccccccEEEEEEEccHHHHHHHHHHHHcccccccEEEEEccccEEEEEEEccHHHHHHHHHHHccccEEEEEccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEEEEEEEEEcHHHHHHHHHHHHHHccccEEEEEcccccEEEEEEEEcHHHHHHHHHHHHcccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEcc
Coil and Loop (DISEMBL)
MINTCVLQSTVVLKIRLHCEGCISKIKKIIYKtkgvdnvtidggkdlvtvkgtmDVKELVPYLKEKLKRNvevvpakkddgekkenkdadkggdkkakeaapatdkggekkekeaaaagggdggkvEVHKMeyygypyppapsywydnhvygqsypmenqHQVVYanqgyppqmhhappmyhapqmfsdenpnacsvm
Flexible Loop (DISEMBL)
mintcvlqSTVVLKIRLHCEGCISKIKkiiyktkgvdnvtidggkdlvtvkgtmdVKELVpylkeklkrnvevvpakkddgekkenkdadkggdkkakeaapatdkggekkekeaaaagggdggkVEVHKMEYYGYPYPPAPSYWYDNHVYGQSYPMENQHQVVYANQGYPPQMHHAPPMYHAPQMFSDENPNACSVM
Low Complexity Region (SEG)
MINTCVLQSTVVLKIRLHCEGCiskikkiiyktkGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPakkddgekkenkdadkggdkkakeaaPATdkggekkekeaaaagggdggkvevHKMEyygypyppapsywyDNHVYGQSYPMENQHQVVYANQGYPPQMHHAPPMYHAPQMFSDENPNACSVM
Disordered region (IsUnstruct)
**NTCVLQSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR********************************************************VEVHKMEYYGYPYPPAPSYWYDNHVYGQSYPMENQHQVVYAN*******************************
Disordered Region (DISOPRED)
******L**TVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVP****************************************************VHKMEYYGYPYPPAPSYWYDNHVYGQSYPMENQHQVVYANQGYPPQMHHAPPMYHAPQMFSDENPNACSVM
Disordered Region (DISEMBL)
MINTCVLQSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPAK**********************************************GKVEVHKMEYYGYPYPPAPSYWYDNHVYGQSYPMENQHQVVYANQGYPPQMHHAPPMYHAPQMFSDENPNACSVM
Disordered Region (DISPRO)
MINTCVLQSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPAK**************************************************VHKMEYYGYPYPPAPSYWYDNHVYGQSYPMENQHQVVYANQGYPPQMHHAPPMYHAPQMFSDENPNACSVM
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MINTCVLQSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPAKKDDGEKKENKDADKGGDKKAKEAAPATDKGGEKKEKEAAAAGGGDGGKVEVHKMEYYGYPYPPAPSYWYDNHVYGQSYPMENQHQVVYANQGYPPQMHHAPPMYHAPQMFSDENPNACSVM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	198	2.2.26 [Sep-21-2011]
Q9SZN7	153	Heavy metal-associated is	no	no	0.333	0.431	0.333	0.0005

>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1

 Score = 44.3 bits (103), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 40/66 (60%)

Query: 10 TVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 69
          TV +K+++ CEGC  K+++ +   KGV +VT++     VTV G +D  ++V  +  +  +
Sbjct: 27 TVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTGK 86

Query: 70 NVEVVP 75
           VE+ P
Sbjct: 87 KVELWP 92

Heavy-metal-binding protein. Binds lead, cadmium and copper. May be involved in heavy-metal transport.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	198
356570770	335	PREDICTED: uncharacterized protein LOC10	0.888	0.525	0.506	1e-37
356505250	329	PREDICTED: uncharacterized protein LOC10	0.848	0.510	0.471	2e-37
297823503	388	hypothetical protein ARALYDRAFT_482676 [	0.934	0.476	0.5	2e-37
18404283	386	heavy-metal-associated domain-containing	0.939	0.481	0.497	2e-36
4097545	248	ATFP2, partial [Arabidopsis thaliana]	0.944	0.754	0.487	9e-36
413968366	324	hypothetical protein [Phaseolus vulgaris	0.848	0.518	0.448	2e-34
255556920	345	metal ion binding protein, putative [Ric	0.883	0.507	0.471	4e-34
356548272	331	PREDICTED: uncharacterized protein LOC54	0.924	0.552	0.523	7e-34
4097571	217	GMFP5, partial [Glycine max]	0.924	0.843	0.523	8e-34
297810411	384	hypothetical protein ARALYDRAFT_908205 [	0.914	0.471	0.477	2e-33

>gi|356570770|ref|XP_003553557.1| PREDICTED: uncharacterized protein LOC100795652 [Glycine max]

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/219 (50%), Positives = 134/219 (61%), Gaps = 43/219 (19%)

Query: 8   QSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKL 67
           +STVVLKIRLHC+GC+ KI+KII K+KGV++V I+GGKDLV+VKGTMDVKE+VPYL +KL
Sbjct: 132 ESTVVLKIRLHCDGCVQKIRKIILKSKGVESVNIEGGKDLVSVKGTMDVKEIVPYLNDKL 191

Query: 68  KRNVEVVPAKKDDGE-KKENKDADKGGDKKAKEAAPATDKGGEKKEKEAAAAGGGDGGKV 126
           KRNVEVVP KK+ G+ KKENK+   G  KK         +GG+K+E E  AA      KV
Sbjct: 192 KRNVEVVPPKKEGGDNKKENKEGGGGDSKK---------EGGKKQEGEDGAA------KV 236

Query: 127 EVHKMEYYGYP---------------YPPAPSYWYDNHVYGQSYPMENQ-HQVVYAN--- 167
           EV+KME+YGY                Y P  S  Y+  V        NQ +   Y N   
Sbjct: 237 EVNKMEHYGYGYGYPPPPMYWYGHGGYAPGESSSYEAEVQPGYNSYSNQGYDGNYGNYHY 296

Query: 168 QGY--------PPQMHHAPPMYHAPQMFSDENPNACSVM 198
           QGY        PP   +  P +  PQMFSDENPNACSVM
Sbjct: 297 QGYNNNYMMAQPPPPFYLNPHHPPPQMFSDENPNACSVM 335

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505250|ref|XP_003521405.1| PREDICTED: uncharacterized protein LOC100792662 [Glycine max]

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/225 (47%), Positives = 124/225 (55%), Gaps = 57/225 (25%)

Query: 8   QSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKL 67
           +STVVLKIRLHCEGCI KI+KII KTKGV++V I+GGKDLV+VKGTMDVKE+VPYL EKL
Sbjct: 128 ESTVVLKIRLHCEGCIQKIRKIILKTKGVESVNIEGGKDLVSVKGTMDVKEIVPYLNEKL 187

Query: 68  KRNVEVVPAKKDDGEKKENKDADKGGDKKAKEAAPATDKGGEKKEKEAAAAGGGDGGKVE 127
           KRNVEVVP KK+ G                       DK    K++     G     KVE
Sbjct: 188 KRNVEVVPPKKEGG-----------------------DKKENNKKEGGGGGGAEGAAKVE 224

Query: 128 VHKMEYYGYPYPPAPSYWYDNHVYG------------QSYPMENQHQVVYANQGY----- 170
           V+KME+YGY YP    YW+ +  Y              SY +E Q    Y+NQGY     
Sbjct: 225 VNKMEHYGYAYPAPHMYWHGHGGYAPGESSSSSSSSNNSYEVEVQSGYSYSNQGYDGNYV 284

Query: 171 -----------------PPQMHHAPPMYHAPQMFSDENPNACSVM 198
                            PP   +  P +  PQMFSDENPNACSVM
Sbjct: 285 NYPYQHGYNDNYMAMAQPPPPFYLNPHHPPPQMFSDENPNACSVM 329

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297823503|ref|XP_002879634.1| hypothetical protein ARALYDRAFT_482676 [Arabidopsis lyrata subsp. lyrata] gi|297325473|gb|EFH55893.1| hypothetical protein ARALYDRAFT_482676 [Arabidopsis lyrata subsp. lyrata]

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/242 (50%), Positives = 138/242 (57%), Gaps = 57/242 (23%)

Query: 8   QSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKL 67
           +S V LKIRLHCEGCI KIKKII K KGV+ V IDG KD+VTVKGTMDVKELVP L +KL
Sbjct: 153 ESLVPLKIRLHCEGCILKIKKIILKIKGVETVAIDGAKDVVTVKGTMDVKELVPLLTKKL 212

Query: 68  KRNVE-VVPAKKDDGEKKENKDADKGGDKKAKEAAPAT---------DKGGEKKEKEAAA 117
           KR VE +VPAKKDDG  ++ K      D  AK+ APAT           GGEKK KEA  
Sbjct: 213 KRTVEPLVPAKKDDGAAEKKKTEAAAPD--AKKEAPATGVNEAKKEGSDGGEKK-KEAGD 269

Query: 118 AG-----GGDGGK------------------------VEVHKMEYYGY-PYPPAPSYWYD 147
            G      GDGG+                          V+KM+YYGY  YP AP YW +
Sbjct: 270 GGEKKKEAGDGGEKKKETGDGGEKKEGGGGGGVPAPVAMVNKMDYYGYSSYPTAPMYWQE 329

Query: 148 NHVYGQSYPMENQHQVV-----------YANQGYPPQMHHAPPMYHAPQMFSDENPNACS 196
            HVYGQSY M  Q   V           YA++ Y P   ++ P  +AP MFSDENPN CS
Sbjct: 330 GHVYGQSYSMGGQSYPVAGQSYPGSGYNYASESYVP---YSQPNVNAPGMFSDENPNGCS 386

Query: 197 VM 198
           VM
Sbjct: 387 VM 388

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18404283|ref|NP_565855.1| heavy-metal-associated domain-containing protein [Arabidopsis thaliana] gi|20197942|gb|AAD31580.2| putative farnesylated protein [Arabidopsis thaliana] gi|330254231|gb|AEC09325.1| heavy-metal-associated domain-containing protein [Arabidopsis thaliana]

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/239 (49%), Positives = 136/239 (56%), Gaps = 53/239 (22%)

Query: 8   QSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKL 67
           +S V LKIRLHCEGCI KIKKII K KGV+ V IDG KD+VTVKGT+DVKELVP L +KL
Sbjct: 153 ESVVPLKIRLHCEGCIQKIKKIILKIKGVETVAIDGAKDVVTVKGTIDVKELVPLLTKKL 212

Query: 68  KRNVE-VVPAKKDDGEKKENKDADKGGDKKAKEAAPA--------TDKGGEKKEKEAAAA 118
           KR VE +VPAKKDDG   ENK  +       KEA  A           GGEKK KE    
Sbjct: 213 KRTVEPLVPAKKDDG-AAENKKTEAAAPDAKKEAPSAGVNEAKKEGSDGGEKK-KEVGDG 270

Query: 119 G-----GGDGGK----------------------VEVHKMEYYGYP-YPPAPSYWYDNHV 150
           G     GGDGG+                        V+KM+YYGY  YP AP +W + HV
Sbjct: 271 GEKKKEGGDGGEKKKEAGDGGEKKKDGGGVPAPVAMVNKMDYYGYSAYPTAPMHWQEGHV 330

Query: 151 YGQSYPMENQHQVV-----------YANQGYPPQMHHAPPMYHAPQMFSDENPNACSVM 198
           YGQSY M  Q+  V           YA++ Y P   +A P  +AP MFSDENPN CSVM
Sbjct: 331 YGQSYSMTGQNYPVGGQSYPGSGYNYASESYVP---YAQPNVNAPGMFSDENPNGCSVM 386

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4097545|gb|AAD09506.1| ATFP2, partial [Arabidopsis thaliana]

 Score =  155 bits (392), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 116/238 (48%), Positives = 134/238 (56%), Gaps = 51/238 (21%)

Query: 8   QSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKL 67
           +S V LKIRLHCEGCI KIKKII K KGV+ V IDG KD+VTVKGT+DVKELVP L +KL
Sbjct: 15  ESVVPLKIRLHCEGCIQKIKKIILKIKGVETVAIDGAKDVVTVKGTIDVKELVPLLTKKL 74

Query: 68  KRNVE-VVPAKKDDGEKKENKDADKGGDKK-------AKEAAPATDKGGEKKEKEAAAAG 119
           KR VE +VPAKKDDG  +  +      D K         EA      GGEKK KE    G
Sbjct: 75  KRTVEPLVPAKKDDGAAEIRRTERAAPDAKKEAPSAGVNEAKKEGSDGGEKK-KEVGDGG 133

Query: 120 -----GGDGGK----------------------VEVHKMEYYGYP-YPPAPSYWYDNHVY 151
                GGDGG+                        V+KM+YYGY  YP AP +W + HVY
Sbjct: 134 EKKKEGGDGGEKKKEAGDGGEKKKDGGGVPAPVAMVNKMDYYGYSAYPTAPMHWQEGHVY 193

Query: 152 GQSYPMENQHQVV-----------YANQGYPPQMHHAPPMYHAPQMFSDENPNACSVM 198
           GQSY M  Q+  V           YA++ Y P   +A P  +AP MFSDENPN CSVM
Sbjct: 194 GQSYSMTGQNYPVGGQSYPGSGYNYASESYVP---YAQPNVNAPGMFSDENPNGCSVM 248

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413968366|gb|AFW90521.1| hypothetical protein [Phaseolus vulgaris]

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/214 (44%), Positives = 115/214 (53%), Gaps = 46/214 (21%)

Query: 8   QSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKL 67
           Q  VVLKIRLHCEGCI KI+++I K KGV++V ID  K+ V V GTMDV  +V YL+EKL
Sbjct: 134 QGPVVLKIRLHCEGCIQKIRRVILKIKGVESVNIDASKNWVNVNGTMDVNGMVAYLEEKL 193

Query: 68  KRNVEVVPAKKDDGEKKENKDADKGGDKKAKEAAPATDKGGEKKEKEAAAAGGGDGGKVE 127
           KR VEVVP  K  GEKKE+   + GGD K K                          KVE
Sbjct: 194 KRKVEVVPVHKKSGEKKEDLKEENGGDGKRKSEP-----------------------KVE 230

Query: 128 VHKMEYYGYPYPPAPSYWYDNHV-----------------YGQSY-PMENQHQVVYANQG 169
           V+KME YGY +PP P YWYD +                  Y  ++    +Q+   Y NQG
Sbjct: 231 VNKMELYGYAFPPPPMYWYDGYGPGQSSSSGGFSVEVHSGYDSNFGNFPDQYPNGYGNQG 290

Query: 170 YPPQMH-----HAPPMYHAPQMFSDENPNACSVM 198
           Y  Q       +  P +  PQMFSDENPNAC VM
Sbjct: 291 YMVQQKPPPPFYFNPPHPPPQMFSDENPNACFVM 324

Source: Phaseolus vulgaris

Species: Phaseolus vulgaris

Genus: Phaseolus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255556920|ref|XP_002519493.1| metal ion binding protein, putative [Ricinus communis] gi|223541356|gb|EEF42907.1| metal ion binding protein, putative [Ricinus communis]

 Score =  149 bits (377), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/225 (47%), Positives = 130/225 (57%), Gaps = 50/225 (22%)

Query: 9   STVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLK 68
           STVVLKIR HC+GC+SK+KKII K KGVD+V++D  KDL+TVKGTMDV  +VPYL  KLK
Sbjct: 136 STVVLKIRTHCDGCVSKMKKIIVKIKGVDSVSVDAPKDLLTVKGTMDVNTMVPYLNAKLK 195

Query: 69  RNVEVVPAKKDDGEKKENKDADKGGDKKAKEAAPATDKGGEKKEKEAAAAGGGDGG---- 124
           R VEVVP KKD+ +K+      +   +K +    A    GEKKE        GDGG    
Sbjct: 196 RTVEVVPPKKDEPKKEGGGGGGEAKTEKKEGGGEAK---GEKKE--------GDGGKKDA 244

Query: 125 --------KVEVHKMEYYGYPYPPAPSYWYDNHVYGQSYPMENQHQVVY---ANQGYPPQ 173
                   K+EV K+EY+     PAP++W D  V+G SY  E  HQ  Y    +Q Y P 
Sbjct: 245 PAPAAEPPKMEVSKLEYFP---APAPTHWLDG-VFGHSYSAEPHHQQGYYPVNHQAYNPV 300

Query: 174 MHHAP----------------PMY----HAPQMFSDENPNACSVM 198
           M+H                  PMY    HAPQMFS+ENPNACS+M
Sbjct: 301 MNHGSYGYVQQGYVQQGYVMEPMYNHPMHAPQMFSEENPNACSIM 345

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548272|ref|XP_003542527.1| PREDICTED: uncharacterized protein LOC547884 [Glycine max]

 Score =  149 bits (376), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 110/210 (52%), Positives = 130/210 (61%), Gaps = 27/210 (12%)

Query: 9   STVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLK 68
           STVVLKI+LHC+GCI+KI++II + KGV  V++DG KDLVTVKGTMDVKE++PYL EKLK
Sbjct: 129 STVVLKIKLHCDGCIAKIRRIILRFKGVQLVSLDGSKDLVTVKGTMDVKEMLPYLNEKLK 188

Query: 69  RNVEVVPAKKDDGEKKENKDADKGGDKKAKEAAPATDKGGEKKEKEAAAAGGGDGGKVEV 128
           RNVEVVP  K D +KKE +    GG  + KE      +     EK+          +V +
Sbjct: 189 RNVEVVPPPKKDDDKKEKEGGGGGGGGEKKEGGGEKKEKEGDGEKKEKDGAAAAAAEV-I 247

Query: 129 HKMEYYGYPYPPAPSYWYD-NHVYGQ-SYPME---------NQHQVV--YANQGYPPQ-- 173
           +KMEY     P  PS+WYD  H  GQ SY ME         N H V   Y NQGYP Q  
Sbjct: 248 NKMEYMHRMAP--PSFWYDGGHFPGQTSYAMEVHPGYGASANNHYVEPGYVNQGYPLQPP 305

Query: 174 ----MH-HAPPMYHAPQMFSDENPNACSVM 198
               MH HAPP    PQMFSDENPNACS+M
Sbjct: 306 LPYYMHPHAPP----PQMFSDENPNACSIM 331

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4097571|gb|AAD09514.1| GMFP5, partial [Glycine max]

 Score =  149 bits (375), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 110/210 (52%), Positives = 130/210 (61%), Gaps = 27/210 (12%)

Query: 9   STVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLK 68
           STVVLKI+LHC+GCI+KI++II + KGV  V++DG KDLVTVKGTMDVKE++PYL EKLK
Sbjct: 15  STVVLKIKLHCDGCIAKIRRIILRFKGVQLVSLDGSKDLVTVKGTMDVKEMLPYLNEKLK 74

Query: 69  RNVEVVPAKKDDGEKKENKDADKGGDKKAKEAAPATDKGGEKKEKEAAAAGGGDGGKVEV 128
           RNVEVVP  K D +KKE +    GG  + KE      +     EK+          +V +
Sbjct: 75  RNVEVVPPPKKDDDKKEKEGGGGGGGGEKKEGGGEKKEKEGDGEKKEKDGAAAAAAEV-I 133

Query: 129 HKMEYYGYPYPPAPSYWYD-NHVYGQ-SYPME---------NQHQVV--YANQGYPPQ-- 173
           +KMEY     P  PS+WYD  H  GQ SY ME         N H V   Y NQGYP Q  
Sbjct: 134 NKMEYMHRMAP--PSFWYDGGHFPGQTSYAMEVHPGYGASANNHYVEPGYVNQGYPLQPP 191

Query: 174 ----MH-HAPPMYHAPQMFSDENPNACSVM 198
               MH HAPP    PQMFSDENPNACS+M
Sbjct: 192 LPYYMHPHAPP----PQMFSDENPNACSIM 217

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297810411|ref|XP_002873089.1| hypothetical protein ARALYDRAFT_908205 [Arabidopsis lyrata subsp. lyrata] gi|297318926|gb|EFH49348.1| hypothetical protein ARALYDRAFT_908205 [Arabidopsis lyrata subsp. lyrata]

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/245 (47%), Positives = 135/245 (55%), Gaps = 64/245 (26%)

Query: 8   QSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKL 67
           +STVVLK +LHCEGC  KIK+I+ K KGV++V ID  KDLV VKG +DVK+L PYL EKL
Sbjct: 150 ESTVVLKTKLHCEGCEHKIKRIVNKIKGVNSVAIDSAKDLVIVKGIIDVKQLTPYLNEKL 209

Query: 68  KRNVEVVPAKKDD----------------------GEKKENKDADKGGDKKAKEAAPATD 105
           KR VEVVPAKKDD                      GEKKENKD    G+KK        D
Sbjct: 210 KRTVEVVPAKKDDGAPAAAAAAPAPAGGEKKDKGAGEKKENKDV---GEKK-------VD 259

Query: 106 KGGEKKEKEAAAAGGGDGGKVEVHKMEYYGY-PYPPAPSYWYDNHVYGQS-YPMENQH-- 161
            GGEKK++ A   GGGDGG ++V K EY GY   P    Y+    VYGQ  Y M+ Q   
Sbjct: 260 GGGEKKKEVAVGGGGGDGGAMDVKKSEYNGYGYPPQPMYYYPQGQVYGQQHYMMQGQSSQ 319

Query: 162 -------------QVVYANQGY----------PPQMHH---APPMYH--APQMFSDENPN 193
                        Q  Y NQGY          PP M+H   A P  H  AP++FSDENPN
Sbjct: 320 SYVQEPYTNQGYVQESYMNQGYGQGYGHEAPPPPYMNHQGYADPYGHMRAPELFSDENPN 379

Query: 194 ACSVM 198
            CSVM
Sbjct: 380 GCSVM 384

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	198
TAIR|locus:2057951	386	AT2G36950 [Arabidopsis thalian	0.343	0.176	0.608	2.6e-26
TAIR|locus:2142614	392	AT5G03380 [Arabidopsis thalian	0.343	0.173	0.602	1.9e-24
TAIR|locus:2046183	245	AT2G28090 [Arabidopsis thalian	0.363	0.293	0.444	1.6e-13
TAIR|locus:2075497	246	AT3G02960 "AT3G02960" [Arabido	0.328	0.264	0.338	3.7e-12
TAIR|locus:2167366	355	FP3 "farnesylated protein 3" [	0.328	0.183	0.307	4e-12
TAIR|locus:2163300	290	AT5G50740 [Arabidopsis thalian	0.323	0.220	0.369	3.6e-11
TAIR|locus:2153969	319	AT5G24580 "AT5G24580" [Arabido	0.338	0.210	0.298	4.7e-11
TAIR|locus:2018768	287	AT1G29000 [Arabidopsis thalian	0.328	0.226	0.276	1.9e-10
TAIR|locus:2121199	153	FP6 "farnesylated protein 6" [	0.333	0.431	0.303	4.5e-09
TAIR|locus:2096204	577	AT3G05220 [Arabidopsis thalian	0.237	0.081	0.407	1.4e-08

TAIR|locus:2057951 AT2G36950 [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 2.6e-26, Sum P(2) = 2.6e-26
 Identities = 42/69 (60%), Positives = 48/69 (69%)

Query:     8 QSTVVLKIRLHCEGCXXXXXXXXXXXXGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKL 67
             +S V LKIRLHCEGC            GV+ V IDG KD+VTVKGT+DVKELVP L +KL
Sbjct:   153 ESVVPLKIRLHCEGCIQKIKKIILKIKGVETVAIDGAKDVVTVKGTIDVKELVPLLTKKL 212

Query:    68 KRNVE-VVP 75
             KR VE +VP
Sbjct:   213 KRTVEPLVP 221

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0005507 "copper ion binding" evidence=IDA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2142614 AT5G03380 [Arabidopsis thaliana (taxid:3702)]

 Score = 204 (76.9 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
 Identities = 41/68 (60%), Positives = 47/68 (69%)

Query:     8 QSTVVLKIRLHCEGCXXXXXXXXXXXXGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKL 67
             +STVVLK +LHCEGC            GV++V ID  KDLV VKG +DVK+L PYL EKL
Sbjct:   153 ESTVVLKTKLHCEGCEHKIKRIVNKIKGVNSVAIDSAKDLVIVKGIIDVKQLTPYLNEKL 212

Query:    68 KRNVEVVP 75
             KR VEVVP
Sbjct:   213 KRTVEVVP 220

GO:0005886 "plasma membrane" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:2046183 AT2G28090 [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
 Identities = 32/72 (44%), Positives = 41/72 (56%)

Query:     4 TCVLQSTVVLKIRLHCEGCXXXXXXXXXXXXGVDNVTIDGGKDLVTVKGTMDVKELVPYL 63
             T V  +TVVLK+   C+GC            GV  V +D  K+ VTV GTMD+K +   L
Sbjct:   117 TVVAVTTVVLKVNCSCDGCIKRIQKAVSTTKGVYQVKMDKEKETVTVMGTMDIKSVTDNL 176

Query:    64 KEKLKRNVEVVP 75
             K KLK+ V+VVP
Sbjct:   177 KRKLKKTVQVVP 188

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2075497 AT3G02960 "AT3G02960" [Arabidopsis thaliana (taxid:3702)]

 Score = 115 (45.5 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
 Identities = 22/65 (33%), Positives = 36/65 (55%)

Query:    10 TVVLKIRLHCEGCXXXXXXXXXXXXGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 69
             T +L++ +HCEGC            G+ +V  D  K  V V+G MD  +LV  +K+KL +
Sbjct:   127 TAILRMNMHCEGCVHEIKRGIEKIKGIQSVEPDRSKSTVVVRGVMDPPKLVEKIKKKLGK 186

Query:    70 NVEVV 74
             + E++
Sbjct:   187 HAELL 191

GO:0005507 "copper ion binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2167366 FP3 "farnesylated protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 101 (40.6 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
 Identities = 20/65 (30%), Positives = 34/65 (52%)

Query:    10 TVVLKIRLHCEGCXXXXXXXXXXXXGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 69
             TVVLK+ +HCE C            GV++   D     VTVKG  + ++LV Y+ ++  +
Sbjct:   172 TVVLKVHMHCEACATEIKKRIMRMKGVESAESDLKSSQVTVKGVFEPQKLVEYVYKRTGK 231

Query:    70 NVEVV 74
             +  ++
Sbjct:   232 HAAIM 236

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0046914 "transition metal ion binding" evidence=IDA

GO:0046916 "cellular transition metal ion homeostasis" evidence=TAS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009616 "virus induced gene silencing" evidence=RCA

GO:0010050 "vegetative phase change" evidence=RCA

TAIR|locus:2163300 AT5G50740 [Arabidopsis thaliana (taxid:3702)]

 Score = 98 (39.6 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
 Identities = 24/65 (36%), Positives = 34/65 (52%)

Query:    11 VVLKIRLHCEGCXXXXXXXXXXXXGVDNVTIDGGKDLVTVKGTM-DVKELVPYLKEKLKR 69
             +VLKI +HCEGC            GV++VT D     V VKG   D  +++  L+ K  R
Sbjct:    36 IVLKIFMHCEGCAKKIHRCLKGFEGVEDVTTDCKTSKVVVKGEKADPLKVLQRLQRKSHR 95

Query:    70 NVEVV 74
              VE++
Sbjct:    96 QVELI 100

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2153969 AT5G24580 "AT5G24580" [Arabidopsis thaliana (taxid:3702)]

 Score = 102 (41.0 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
 Identities = 20/67 (29%), Positives = 31/67 (46%)

Query:     9 STVVLKIRLHCEGCXXXXXXXXXXXXGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLK 68
             +TV L + +HC+ C            GV     +     V V GTMD ++LV Y+  + K
Sbjct:   145 TTVELSVNMHCQACADQLKKKILKMRGVQTTVTEHTTGKVIVTGTMDAEKLVDYVYRRTK 204

Query:    69 RNVEVVP 75
             +   +VP
Sbjct:   205 KQARIVP 211

GO:0005507 "copper ion binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2018768 AT1G29000 [Arabidopsis thaliana (taxid:3702)]

 Score = 96 (38.9 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
 Identities = 18/65 (27%), Positives = 34/65 (52%)

Query:    10 TVVLKIRLHCEGCXXXXXXXXXXXXGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 69
             T VLK+ +HC  C             +  V  D     +TV+GT++  +L+ Y+K+K+ +
Sbjct:   114 TTVLKVHIHCAQCDKDLQHKLLKHKAIHIVKTDTKAQTLTVQGTIESAKLLAYIKKKVHK 173

Query:    70 NVEVV 74
             + E++
Sbjct:   174 HAEII 178

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2121199 FP6 "farnesylated protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 94 (38.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
 Identities = 20/66 (30%), Positives = 34/66 (51%)

Query:    10 TVVLKIRLHCEGCXXXXXXXXXXXXGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKR 69
             TV +K+++ CEGC            GV +VT++     VTV G +D  ++V  +  +  +
Sbjct:    27 TVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTGK 86

Query:    70 NVEVVP 75
              VE+ P
Sbjct:    87 KVELWP 92

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0010286 "heat acclimation" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2096204 AT3G05220 [Arabidopsis thaliana (taxid:3702)]

 Score = 87 (35.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
 Identities = 22/54 (40%), Positives = 30/54 (55%)

Query:   151 YGQSYPMENQHQVVYANQGYPPQMH-HAPPMY--HAPQ---MFSDENPNACSVM 198
             YG  +  +  H ++YA   YP   + H PPM   H+     MFSDENP +CS+M
Sbjct:   525 YGGGHGGDMYHPMMYARP-YPAVNYAHPPPMPPPHSDSYTHMFSDENPGSCSIM 577

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	198
pfam00403	62	pfam00403, HMA, Heavy-metal-associated domain	2e-09
cd00371	63	cd00371, HMA, Heavy-metal-associated domain (HMA)	5e-04

>gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain

 Score = 51.1 bits (123), Expect = 2e-09
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 5/62 (8%)

Query: 11 VVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRN 70
           +    + C GC  K++K + K  GV +V++D     VTV G  D  +L     EKLK+ 
Sbjct: 1  TLRVPGMTCAGCAKKVEKALSKLPGVSSVSVDLETGKVTVTGDPDPLKL-----EKLKKA 55

Query: 71 VE 72
          +E
Sbjct: 56 IE 57

Length = 62

>gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

 Score = 36.8 bits (86), Expect = 5e-04
 Identities = 14/36 (38%), Positives = 22/36 (61%)

Query: 17 LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG 52
          + C GC+SKI+K + K  GV++V +D      TV+ 
Sbjct: 7  MTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEY 42

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. Length = 63

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	198
KOG1603	73	consensus Copper chaperone [Inorganic ion transpor	99.55
PF00403	62	HMA: Heavy-metal-associated domain; InterPro: IPR0	99.44
COG2608	71	CopZ Copper chaperone [Inorganic ion transport and	99.27
KOG4656	247	consensus Copper chaperone for superoxide dismutas	99.05
PLN02957	238	copper, zinc superoxide dismutase	98.53
PRK10671	834	copA copper exporting ATPase; Provisional	98.3
TIGR00003	68	copper ion binding protein. This model describes a	97.89
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	97.7
PRK10671	834	copA copper exporting ATPase; Provisional	97.04
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	96.75
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	96.24
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	96.23
TIGR02052	92	MerP mercuric transport protein periplasmic compon	93.46
PF02680	95	DUF211: Uncharacterized ArCR, COG1888; InterPro: I	89.37
PF01883	72	DUF59: Domain of unknown function DUF59; InterPro:	89.34
cd00371	63	HMA Heavy-metal-associated domain (HMA) is a conse	87.26
COG1888	97	Uncharacterized protein conserved in archaea [Func	87.18
PRK13748	561	putative mercuric reductase; Provisional	86.48

>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.55  E-value=2.5e-14  Score=102.63  Aligned_cols=69  Identities=43%  Similarity=0.654  Sum_probs=62.9

Q ss_pred             cceEEEEEEeecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEcC
Q 029150            7 LQSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVP   75 (198)
Q Consensus         7 ~~~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV~   75 (198)
                      ..++.+++|+|||++|+.+|++.|+.++||.++.+|..+++|||.|.+||..|++.|++..++++.+|.
T Consensus         3 ~~~~~v~kv~~~C~gc~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~~~p~~vl~~l~k~~~k~~~~~~   71 (73)
T KOG1603|consen    3 PIKTVVLKVNMHCEGCARKVKRVLQKLKGVESVDIDIKKQKVTVKGNVDPVKLLKKLKKTGGKRAELWK   71 (73)
T ss_pred             CccEEEEEECcccccHHHHHHHHhhccCCeEEEEecCCCCEEEEEEecCHHHHHHHHHhcCCCceEEec
Confidence            467899999999999999999999999999999999999999999999999999999964447777663

>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures

Probab=99.44  E-value=4.5e-13  Score=91.71  Aligned_cols=58  Identities=28%  Similarity=0.503  Sum_probs=53.4

Q ss_pred             EEEE-eecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeC---CHHHHHHHHHhccCCc
Q 029150           12 VLKI-RLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTM---DVKELVPYLKEKLKRN   70 (198)
Q Consensus        12 vLkV-~MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~v---dp~~L~~~L~kk~G~~   70 (198)
                      +|+| +|+|++|+++|+++|++++||.++.+|+.+++|+|+++.   ++.+|.++|+ ++||+
T Consensus         1 t~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~-~~Gy~   62 (62)
T PF00403_consen    1 TFKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIE-KAGYE   62 (62)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCHHHHHHHHH-HTTSE
T ss_pred             CEEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCHHHHHHHHH-HhCcC
Confidence            6889 599999999999999999999999999999999999874   5699999999 89874

These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....

>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.27  E-value=1.9e-11  Score=87.31  Aligned_cols=66  Identities=23%  Similarity=0.465  Sum_probs=58.5

Q ss_pred             ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEe--e-eCCHHHHHHHHHhccCCceEEc
Q 029150            8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK--G-TMDVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus         8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~--G-~vdp~~L~~~L~kk~G~~aeiV   74 (198)
                      +++++|+|. |+|.+|+.+|+++|.+++||.+|.+|+..++++|+  + .++...|+++|. .+||.+..+
T Consensus         1 ~~~~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~~~~~~i~~ai~-~aGy~~~~~   70 (71)
T COG2608           1 MMKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIE-DAGYKVEEI   70 (71)
T ss_pred             CceEEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCcCCHHHHHHHHH-HcCCCeeec
Confidence            467899996 99999999999999999999999999999666655  5 489999999999 999988764

>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism]

Probab=99.05  E-value=6.9e-10  Score=94.90  Aligned_cols=72  Identities=19%  Similarity=0.377  Sum_probs=66.6

Q ss_pred             cceEEEEEEeecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEcCCCCC
Q 029150            7 LQSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPAKKD   79 (198)
Q Consensus         7 ~~~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV~p~k~   79 (198)
                      ..-+++|.|.|||++|+..|+..|..++||.+|+||+..+.|.|.+...+.+|...|+ .+|+++.+....+.
T Consensus         5 ~~~~~efaV~M~cescvnavk~~L~~V~Gi~~vevdle~q~v~v~ts~p~s~i~~~le-~tGr~Avl~G~G~p   76 (247)
T KOG4656|consen    5 DTYEAEFAVQMTCESCVNAVKACLKGVPGINSVEVDLEQQIVSVETSVPPSEIQNTLE-NTGRDAVLRGAGKP   76 (247)
T ss_pred             CceeEEEEEechhHHHHHHHHHHhccCCCcceEEEEhhhcEEEEEccCChHHHHHHHH-hhChheEEecCCch
Confidence            3456899999999999999999999999999999999999999999999999999999 99999999876543

>PLN02957 copper, zinc superoxide dismutase

Probab=98.53  E-value=6.9e-07  Score=77.20  Aligned_cols=73  Identities=22%  Similarity=0.438  Sum_probs=65.9

Q ss_pred             ccceEEEEEEeecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEcCCCCC
Q 029150            6 VLQSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPAKKD   79 (198)
Q Consensus         6 ~~~~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV~p~k~   79 (198)
                      +.++++.|.|.|+|+.|+.+|+++|.+++||.++.+|+..++++|...++...|+..|+ ++|+.+++++....
T Consensus         3 ~~~~~~~~~VgMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~~~~~~I~~aIe-~~Gy~a~~~~~~~~   75 (238)
T PLN02957          3 LPELLTEFMVDMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSSPVKAMTAALE-QTGRKARLIGQGDP   75 (238)
T ss_pred             CCcEEEEEEECccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEecCCHHHHHHHHH-HcCCcEEEecCCCc
Confidence            45678889999999999999999999999999999999999999998888999999998 99999988866443

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.30  E-value=1.8e-06  Score=85.88  Aligned_cols=66  Identities=20%  Similarity=0.384  Sum_probs=59.3

Q ss_pred             ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEcCC
Q 029150            8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPA   76 (198)
Q Consensus         8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV~p   76 (198)
                      +++++|+|+ |+|.+|+.+|+++|.+++||.+|.+|+  ++++|++..++..|...|+ .+||.+.++.+
T Consensus         2 ~~~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~--~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~~~   68 (834)
T PRK10671          2 SQTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSI--TEAHVTGTASAEALIETIK-QAGYDASVSHP   68 (834)
T ss_pred             CeEEEEEECCcccHHHHHHHHHHHhcCCCcceEEEee--eEEEEEecCCHHHHHHHHH-hcCCccccccc
Confidence            367999996 999999999999999999999999999  4667777789999999999 99999998753

>TIGR00003 copper ion binding protein

Probab=97.89  E-value=0.00016  Score=45.03  Aligned_cols=61  Identities=18%  Similarity=0.300  Sum_probs=50.6

Q ss_pred             eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---eCCHHHHHHHHHhccCCc
Q 029150            9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRN   70 (198)
Q Consensus         9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G---~vdp~~L~~~L~kk~G~~   70 (198)
                      +++.+.|. |+|..|+..|++.+..+.+|..+.+++....+.|..   ..+...+...|. ..|+.
T Consensus         2 ~~~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~   66 (68)
T TIGR00003         2 QKFTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQATEICIAEAIL-DAGYE   66 (68)
T ss_pred             cEEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCCCCHHHHHHHHH-HcCCC
Confidence            45678896 999999999999999999999999999999988874   256777777775 66654

This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases.

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.70  E-value=9.8e-05  Score=73.17  Aligned_cols=63  Identities=21%  Similarity=0.402  Sum_probs=56.7

Q ss_pred             eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CC-HHHHHHHHHhccCCceEE
Q 029150            9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MD-VKELVPYLKEKLKRNVEV   73 (198)
Q Consensus         9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vd-p~~L~~~L~kk~G~~aei   73 (198)
                      .++.|.|. |||..|+.+|+ +|.+++||.++.+++.+++++|..+   .+ +..+...++ .+||.+..
T Consensus         2 ~~~~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~~~~~~~~~~~v~-~~gy~~~~   69 (713)
T COG2217           2 RETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLPADIVAAVE-KAGYSARL   69 (713)
T ss_pred             ceeEEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEecccccccHHHHHHHHH-hcCccccc
Confidence            46789996 99999999999 9999999999999999999999854   45 789999998 99998876

>PRK10671 copA copper exporting ATPase; Provisional

Probab=97.04  E-value=0.0019  Score=64.57  Aligned_cols=64  Identities=19%  Similarity=0.414  Sum_probs=56.6

Q ss_pred             EEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEc
Q 029150           10 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus        10 tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV   74 (198)
                      +++|.|. |+|..|+.+|++.|.+++||.++.+++.++++.|.+..++..+...|+ .+|+.+.++
T Consensus       100 ~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~~~s~~~I~~~I~-~~Gy~a~~~  164 (834)
T PRK10671        100 SQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVE-KAGYGAEAI  164 (834)
T ss_pred             eEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEccCCHHHHHHHHH-hcCCCcccc
Confidence            5678886 999999999999999999999999999999999887778888888888 899876544

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.75  E-value=0.0036  Score=63.40  Aligned_cols=66  Identities=20%  Similarity=0.430  Sum_probs=59.4

Q ss_pred             eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEcC
Q 029150            9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVVP   75 (198)
Q Consensus         9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV~   75 (198)
                      .+++|.|. |.|..|..+|++.|.+++||.++.+|..++++.|.-.   +.+-.+++.|. .+|+.+.+..
T Consensus       146 ~~i~L~v~g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~~~~pr~i~k~ie-~~~~~~~~~~  215 (951)
T KOG0207|consen  146 QKIYLDVLGMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPEITGPRDIIKAIE-ETGFEASVRP  215 (951)
T ss_pred             CcEEEEeecccccchhhhhHHHHhhccCeeEEEEeccCCceEEEecccccChHHHHHHHH-hhcccceeee
Confidence            68999996 9999999999999999999999999999999999854   78999999998 8888776653

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=96.24  E-value=0.013  Score=58.31  Aligned_cols=64  Identities=14%  Similarity=0.302  Sum_probs=52.3

Q ss_pred             ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee--CCHHHHHHHHHhccCCceEE
Q 029150            8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT--MDVKELVPYLKEKLKRNVEV   73 (198)
Q Consensus         8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~--vdp~~L~~~L~kk~G~~aei   73 (198)
                      ..++.|.|. |+|..|+.+|++.|.+++||.++.+++.+.++.|...  .+ ..+...++ .+|+.+..
T Consensus        52 ~~r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~~-~~I~~aI~-~~Gy~a~~  118 (741)
T PRK11033         52 GTRYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIR-AQVESAVQ-KAGFSLRD  118 (741)
T ss_pred             CceEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccch-HHHHHHHH-hccccccc
Confidence            356778886 9999999999999999999999999999999888643  23 66667777 78887643

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.23  E-value=0.0089  Score=60.67  Aligned_cols=62  Identities=13%  Similarity=0.325  Sum_probs=56.5

Q ss_pred             eecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee--CCHHHHHHHHHhccCCceEEcCCCC
Q 029150           16 RLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT--MDVKELVPYLKEKLKRNVEVVPAKK   78 (198)
Q Consensus        16 ~MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~--vdp~~L~~~L~kk~G~~aeiV~p~k   78 (198)
                      .|+|..|.+.|++++.+.+||.++.|++.+++.+|.-+  ++++.|.++|. -.|+.+.++....
T Consensus         2 gmtc~ac~~si~~~~~~~~g~~~i~vsl~~~~~~v~~~~~~~~~~i~~~ie-d~gf~~~~~~~~~   65 (951)
T KOG0207|consen    2 GMTCSACSNSIEKAISRKPGVQKIEVSLAQKRANVSYDNIVSPESIKETIE-DMGFEASLLSDSE   65 (951)
T ss_pred             CccHHHHhhhHHHHHhcCCCceeEEEEeccccceEEEeeccCHHHHHHHhh-cccceeeecccCc
Confidence            59999999999999999999999999999999988854  89999999998 9999999886643

>TIGR02052 MerP mercuric transport protein periplasmic component

Probab=93.46  E-value=1.3  Score=30.18  Aligned_cols=64  Identities=20%  Similarity=0.302  Sum_probs=47.4

Q ss_pred             eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---eCCHHHHHHHHHhccCCceEE
Q 029150            9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEV   73 (198)
Q Consensus         9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G---~vdp~~L~~~L~kk~G~~aei   73 (198)
                      .++.+.+. ++|..|..+++..+....+|....++.....+.+.-   ..+...+...+. ..++.+++
T Consensus        23 ~~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~   90 (92)
T TIGR02052        23 QTVTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNVKALTEATT-DAGYPSSL   90 (92)
T ss_pred             eEEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-hcCCCeEe
Confidence            35567775 999999999999999999998888888887766652   245666655555 66666543

This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403).

>PF02680 DUF211: Uncharacterized ArCR, COG1888; InterPro: IPR003831 This entry describes proteins of unknown function

Probab=89.37  E-value=2.1  Score=32.76  Aligned_cols=66  Identities=24%  Similarity=0.395  Sum_probs=45.5

Q ss_pred             ceEEEEEEeecChhHHHHHHHHHhcCCCccEEEE-----eCCCC--eEEEeee-CCHHHHHHHHHhccCCceEEc
Q 029150            8 QSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTI-----DGGKD--LVTVKGT-MDVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus         8 ~~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~V-----D~~~~--kVtV~G~-vdp~~L~~~L~kk~G~~aeiV   74 (198)
                      .+.++|-|-.--.--.-.+-++|.+++||..|.+     |..+.  ++||.|. +|.+.|.++|. .+|-.+.++
T Consensus         4 irRlVLDVlKP~~p~i~e~A~~l~~~~gV~gVnitv~EvD~ete~lkitiEG~~id~d~i~~~Ie-~~Gg~IHSI   77 (95)
T PF02680_consen    4 IRRLVLDVLKPHEPSIVELAKALSELEGVDGVNITVVEVDVETENLKITIEGDDIDFDEIKEAIE-ELGGVIHSI   77 (95)
T ss_dssp             EEEEEEEEEEESSS-HHHHHHHHHTSTTEEEEEEEEEEE-SSEEEEEEEEEESSE-HHHHHHHHH-HTT-EEEEE
T ss_pred             eeEEEEEeecCCCCCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEeCCCCHHHHHHHHH-HcCCeEEee
Confidence            4567777753344445578888999999887764     44444  4456686 99999999999 899887765

; PDB: 3BPD_I 2RAQ_F 2X3D_E.

>PF01883 DUF59: Domain of unknown function DUF59; InterPro: IPR002744 This family includes prokaryotic proteins of unknown function

Probab=89.34  E-value=0.58  Score=32.57  Aligned_cols=33  Identities=21%  Similarity=0.448  Sum_probs=24.1

Q ss_pred             eEEEEEEeecChhHH------HHHHHHHhcCCCccEEEE
Q 029150            9 STVVLKIRLHCEGCI------SKIKKIIYKTKGVDNVTI   41 (198)
Q Consensus         9 ~tvvLkV~MhC~gCa------~kI~kaL~kl~GV~sV~V   41 (198)
                      .++.|.+.+...+|.      +.|+.+|..++||.+|+|
T Consensus        34 ~~V~v~l~l~~~~~~~~~~l~~~i~~~l~~l~gv~~V~V   72 (72)
T PF01883_consen   34 GKVSVSLELPTPACPAAEPLREEIREALKALPGVKSVKV   72 (72)
T ss_dssp             CEEEEEE--SSTTHTTHHHHHHHHHHHHHTSTT-SEEEE
T ss_pred             CEEEEEEEECCCCchHHHHHHHHHHHHHHhCCCCceEeC
Confidence            567777777776665      788899999999999976

The family also includes PhaH (O84984 from SWISSPROT) from Pseudomonas putida. PhaH forms a complex with PhaF (O84982 from SWISSPROT), PhaG (O84983 from SWISSPROT) and PhaI (O84985 from SWISSPROT), which hydroxylates phenylacetic acid to 2-hydroxyphenylacetic acid []. So members of this family may all be components of ring hydroxylating complexes.; PDB: 3LNO_C 3CQ3_A 3CQ2_D 2CU6_B 3CQ1_A 3UX3_B 3UX2_A 1WCJ_A 1UWD_A.

>cd00371 HMA Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

Probab=87.26  E-value=3.3  Score=22.58  Aligned_cols=49  Identities=33%  Similarity=0.556  Sum_probs=35.3

Q ss_pred             eecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee--CCHHHHHHHHH
Q 029150           16 RLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT--MDVKELVPYLK   64 (198)
Q Consensus        16 ~MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~--vdp~~L~~~L~   64 (198)
                      .++|..|...+...+....++....+++....+.+...  .+...+...+.
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   56 (63)
T cd00371           6 GMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDPEVSPEELLEAIE   56 (63)
T ss_pred             CeEcHHHHHHHHHHHhcCCCEeEEEEEccCCEEEEEECCCCCHHHHHHHHH
Confidence            48899999999999989999887778877776666532  24444433443

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions.

>COG1888 Uncharacterized protein conserved in archaea [Function unknown]

Probab=87.18  E-value=4  Score=31.14  Aligned_cols=67  Identities=24%  Similarity=0.347  Sum_probs=47.5

Q ss_pred             ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEE-----eC--CCCeEEEeee-CCHHHHHHHHHhccCCceEEcC
Q 029150            8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTI-----DG--GKDLVTVKGT-MDVKELVPYLKEKLKRNVEVVP   75 (198)
Q Consensus         8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~V-----D~--~~~kVtV~G~-vdp~~L~~~L~kk~G~~aeiV~   75 (198)
                      ...++|.|- -|-.--.--+-+.|+++.||+-|.+     |.  .+=++||.|+ +|-+.|.+.|. .+|--+.++.
T Consensus         5 iRRlVLDvlKP~~~p~ive~A~~lskl~gVegVNItv~eiD~et~~~~itIeG~~ldydei~~~iE-~~Gg~IHSiD   80 (97)
T COG1888           5 IRRLVLDVLKPHRGPTIVELALELSKLEGVEGVNITVTEIDVETENLKITIEGTNLDYDEIEEVIE-ELGGAIHSID   80 (97)
T ss_pred             ceeeeeeecCCcCCCcHHHHHHHHhhcCCcceEEEEEEEeeehhcceEEEEEcCCCCHHHHHHHHH-HcCCeeeehh
Confidence            355666664 3434455567778899999877654     33  3456677786 99999999998 8998887663

>PRK13748 putative mercuric reductase; Provisional

Probab=86.48  E-value=4  Score=38.64  Aligned_cols=64  Identities=20%  Similarity=0.325  Sum_probs=49.5

Q ss_pred             EEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee--eCCHHHHHHHHHhccCCceEEcCC
Q 029150           12 VLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG--TMDVKELVPYLKEKLKRNVEVVPA   76 (198)
Q Consensus        12 vLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G--~vdp~~L~~~L~kk~G~~aeiV~p   76 (198)
                      .+.+. |+|..|..+++..+..++++....+++....+.+..  ..+...+...+. ..++.+++...
T Consensus         3 ~i~i~g~~C~~c~~~ie~~l~~~~gv~~a~~~~~~~~~~v~~~~~~~~~~i~~~i~-~~g~~~~~~~~   69 (561)
T PRK13748          3 TLKITGMTCDSCAAHVKDALEKVPGVQSADVSYPKGSAQLAIEVGTSPDALTAAVA-GLGYRATLADA   69 (561)
T ss_pred             EEEECCeecHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEEECCCCCHHHHHHHHH-HcCCeeeccCc
Confidence            35564 999999999999999999999999999888877763  245666666666 67777665544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	198
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	4e-11
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	2e-09
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	2e-08
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	1e-07
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	2e-07

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98

 Score = 56.4 bits (136), Expect = 4e-11
 Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 1/75 (1%)

Query: 9  STVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLK 68
           T+   +++ C+ C+  ++K +    GV +V +     +V V  T+  +E+   L E   
Sbjct: 19 CTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALL-EGTG 77

Query: 69 RNVEVVPAKKDDGEK 83
          R   +        + 
Sbjct: 78 RQAVLKGMGSGQLQN 92

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 222

 Score = 54.3 bits (130), Expect = 2e-09
 Identities = 20/128 (15%), Positives = 43/128 (33%), Gaps = 5/128 (3%)

Query: 11  VVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYL----KEK 66
               I +HCE C++ IK  +    G++++  D  + +++V+ ++    ++  L    K+ 
Sbjct: 8   ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDA 67

Query: 67  LKRNVEVVPAKKDDGEKKENKDADKGGDKKAKEAAPA-TDKGGEKKEKEAAAAGGGDGGK 125
           + R      +      +   K         A          G  K   +    G  + G 
Sbjct: 68  IIRGAGKPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGN 127

Query: 126 VEVHKMEY 133
                 E 
Sbjct: 128 YHASIHEK 135

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 249

 Score = 52.1 bits (124), Expect = 2e-08
 Identities = 11/55 (20%), Positives = 29/55 (52%)

Query: 11 VVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKE 65
              I +HCE C++ IK  +    G++++  D  + +++V+ ++    ++  L+ 
Sbjct: 9  ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRN 63

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Length = 68

 Score = 46.2 bits (110), Expect = 1e-07
 Identities = 10/52 (19%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 9  STVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELV 60
                + + C GC   + +++ K  GV    ID     V ++    +  L+
Sbjct: 2  PKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLL 52

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Length = 73

 Score = 45.5 bits (108), Expect = 2e-07
 Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 10 TVVLKIRLHCEGCISKIKKIIYKTK-GVDNVTIDGGKDLVTVKGTMDVKELV 60
               + + C GC   + K++ K +  V  + I   K LV V  T+    ++
Sbjct: 6  HYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFIL 57

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	198
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	99.6
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	99.5
4a4j_A	69	Pacszia, cation-transporting ATPase PACS; hydrolas	99.46
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	99.42
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	99.4
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	99.39
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	99.29
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	99.29
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	99.23
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	99.22
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	99.22
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	99.22
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	99.2
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	99.19
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	99.19
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	99.18
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	99.18
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	99.17
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	99.17
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	99.16
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	99.16
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	99.15
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	99.14
2kyz_A	67	Heavy metal binding protein; structural genomics,	99.12
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	99.12
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	99.12
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	99.1
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	99.1
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	99.09
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	99.08
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	99.03
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	99.03
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	99.03
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	99.01
2kkh_A	95	Putative heavy metal transporter; zinc transport,	99.0
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	98.91
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.87
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	98.84
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.57
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	98.5
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.37
3bpd_A	100	Uncharacterized protein; heptamer, Mg+2 ION, PSI-2	90.19
2x3d_A	96	SSO6206; unknown function; 2.70A {Sulfolobus solfa	86.95
2raq_A	97	Conserved protein MTH889; alpha-beta protein, stru	86.93
3cq1_A	103	Putative uncharacterized protein TTHB138; DTDP-4-k	84.69
3lno_A	108	Putative uncharacterized protein; alpha-beta fold,	84.22
1uwd_A	103	Hypothetical protein TM0487; similar to PAAD prote	81.74

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A

Probab=99.60  E-value=3.8e-15  Score=101.59  Aligned_cols=67  Identities=21%  Similarity=0.395  Sum_probs=63.2

Q ss_pred             ceEEEEEEeecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEcCC
Q 029150            8 QSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPA   76 (198)
Q Consensus         8 ~~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV~p   76 (198)
                      +++++|+|+|+|.+|+.+|+++|.+++|| ++.+|+.+++++|++.+++..|+++|+ ++||.+.++++
T Consensus         1 m~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~~~   67 (68)
T 3iwl_A            1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLK-KTGKTVSYLGL   67 (68)
T ss_dssp             -CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHH-TTCSCEEEEEC
T ss_pred             CceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHH-HcCCceEecCC
Confidence            45788999999999999999999999999 999999999999999999999999999 99999999876

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A

Probab=99.50  E-value=9.5e-14  Score=95.03  Aligned_cols=67  Identities=22%  Similarity=0.370  Sum_probs=63.1

Q ss_pred             ceEEEEEEeecChhHHHHHHHHHhcCC-CccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEcC
Q 029150            8 QSTVVLKIRLHCEGCISKIKKIIYKTK-GVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVP   75 (198)
Q Consensus         8 ~~tvvLkV~MhC~gCa~kI~kaL~kl~-GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV~   75 (198)
                      +.+++|+|+|+|.+|+.+|+++|.+++ ||.++.+|+.+++++|.+.+++..|+++|+ ++||.+.++.
T Consensus         4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~~   71 (73)
T 1cc8_A            4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIK-KTGKEVRSGK   71 (73)
T ss_dssp             CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHH-TTSSCEEEEE
T ss_pred             ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHH-HhCCCceeee
Confidence            567889999999999999999999999 999999999999999999899999999999 9999998764

>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A

Probab=99.46  E-value=3.7e-13  Score=90.50  Aligned_cols=65  Identities=22%  Similarity=0.408  Sum_probs=60.9

Q ss_pred             eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEe--eeCCHHHHHHHHHhccCCceEEc
Q 029150            9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK--GTMDVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus         9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~--G~vdp~~L~~~L~kk~G~~aeiV   74 (198)
                      ++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.  +.+++..|+++|+ ++||.++++
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~~~~~   69 (69)
T 4a4j_A            2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVE-RAGYHARVL   69 (69)
T ss_dssp             EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHH-HTTCEEEEC
T ss_pred             CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHH-HcCCceEeC
Confidence            57899997 99999999999999999999999999999999999  6689999999999 999998764

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0

Probab=99.42  E-value=7.1e-13  Score=90.45  Aligned_cols=67  Identities=9%  Similarity=0.238  Sum_probs=61.8

Q ss_pred             ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEcC
Q 029150            8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVVP   75 (198)
Q Consensus         8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV~   75 (198)
                      |++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...   +++..|+++|+ ++||.+.++.
T Consensus         1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~   71 (74)
T 3dxs_X            1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIE-DAGFEAEILA   71 (74)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHTCEEEEEE
T ss_pred             CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HCCCceEEcc
Confidence            467899996 9999999999999999999999999999999999853   68999999999 9999998874

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}

Probab=99.40  E-value=7.7e-13  Score=90.98  Aligned_cols=67  Identities=18%  Similarity=0.375  Sum_probs=63.0

Q ss_pred             cceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEcCC
Q 029150            7 LQSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPA   76 (198)
Q Consensus         7 ~~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV~p   76 (198)
                      .+++++|.|. |+|.+|+.+|+++|.+ +||.++.||+.+++++|... ++..|+++|+ ++||.+.++++
T Consensus         3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~-~~Gy~~~~~~~   70 (73)
T 3fry_A            3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVE-AAGYQAKLRSS   70 (73)
T ss_dssp             CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHH-HTTCEEEECCS
T ss_pred             ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHH-HcCCceEecCc
Confidence            4678999997 9999999999999999 99999999999999999988 9999999999 99999998865

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.39  E-value=1.6e-12  Score=95.58  Aligned_cols=71  Identities=18%  Similarity=0.371  Sum_probs=65.3

Q ss_pred             cceEEEEEEeecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEcCCCC
Q 029150            7 LQSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPAKK   78 (198)
Q Consensus         7 ~~~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV~p~k   78 (198)
                      .+.+++|+|.|+|.+|+.+|+++|.+++||.+|.||+.+++++|.+.+++..|+.+|+ ++||.+.++....
T Consensus        17 ~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~-~~Gy~~~~~~~~~   87 (98)
T 2crl_A           17 TLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLE-GTGRQAVLKGMGS   87 (98)
T ss_dssp             CCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHH-TTTSCEEEEESCC
T ss_pred             cceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHH-HhCCceEEccCCC
Confidence            3467889999999999999999999999999999999999999999899999999998 9999999876544

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A

Probab=99.29  E-value=6.2e-12  Score=83.39  Aligned_cols=63  Identities=30%  Similarity=0.492  Sum_probs=58.1

Q ss_pred             EEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEc
Q 029150           11 VVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus        11 vvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV   74 (198)
                      ++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.+.+++..|.+.|. ++||.+..+
T Consensus         2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~   65 (66)
T 2roe_A            2 LKLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVE-EEGYKAEVL   65 (66)
T ss_dssp             BCEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHH-TTTCEEEEC
T ss_pred             EEEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHH-HcCCCcEec
Confidence            358886 999999999999999999999999999999999977789999999999 999988765

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A

Probab=99.29  E-value=4.6e-12  Score=82.12  Aligned_cols=61  Identities=20%  Similarity=0.366  Sum_probs=56.8

Q ss_pred             EEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCce
Q 029150           10 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNV   71 (198)
Q Consensus        10 tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~a   71 (198)
                      +++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.+.+++..|...|+ .+||.+
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~G~~~   63 (64)
T 2xmm_A            2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIA-SAGYEV   63 (64)
T ss_dssp             CEEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHH-HTTCCC
T ss_pred             eEEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHH-HcCCCC
Confidence            4678996 999999999999999999999999999999999998889999999998 899875

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}

Probab=99.23  E-value=4.7e-11  Score=79.14  Aligned_cols=64  Identities=19%  Similarity=0.421  Sum_probs=57.6

Q ss_pred             cceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCce
Q 029150            7 LQSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNV   71 (198)
Q Consensus         7 ~~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~a   71 (198)
                      .+.+++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...   ++...|+..|. .+||.+
T Consensus         3 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~   70 (71)
T 2l3m_A            3 AMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIE-DQGYDV   70 (71)
T ss_dssp             SEEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHH-HTTCEE
T ss_pred             CcEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCC
Confidence            3567899996 9999999999999999999999999999999999843   67899999998 899865

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A

Probab=99.22  E-value=7.6e-11  Score=77.72  Aligned_cols=66  Identities=20%  Similarity=0.348  Sum_probs=58.0

Q ss_pred             ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee--CCHHHHHHHHHhccCCceEEc
Q 029150            8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT--MDVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus         8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~--vdp~~L~~~L~kk~G~~aeiV   74 (198)
                      +++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...  ++...|...|. .+||.+.++
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~~~~   70 (71)
T 2xmw_A            2 AQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVE-RAGYHARVL   70 (71)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHH-HHTCEEEEE
T ss_pred             CcEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHH-HcCCCceeC
Confidence            356789997 9999999999999999999999999999999999854  67889999998 899987653

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A

Probab=99.22  E-value=6.8e-11  Score=78.39  Aligned_cols=66  Identities=18%  Similarity=0.347  Sum_probs=59.0

Q ss_pred             ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEc
Q 029150            8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus         8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV   74 (198)
                      .++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...   ++...|...|. .+||.+.++
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~   71 (72)
T 1aw0_A            2 TQETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE-DMGFDATLS   71 (72)
T ss_dssp             CEEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEEC
T ss_pred             CeEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHH-HCCCCcEeC
Confidence            356789996 9999999999999999999999999999999999864   67889999998 899987664

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A

Probab=99.22  E-value=6.9e-11  Score=78.35  Aligned_cols=66  Identities=24%  Similarity=0.304  Sum_probs=59.2

Q ss_pred             ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEc
Q 029150            8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus         8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV   74 (198)
                      +.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...   ++...|...|. .+||.+.+.
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~   71 (72)
T 1osd_A            2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA-DAGYPSSVK   71 (72)
T ss_dssp             EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHH-HTTCCCEEC
T ss_pred             ceEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-hcCCCeEec
Confidence            457889996 9999999999999999999999999999999999854   67889999998 899987654

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}

Probab=99.20  E-value=2.3e-11  Score=87.04  Aligned_cols=65  Identities=20%  Similarity=0.256  Sum_probs=58.5

Q ss_pred             ccceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCce
Q 029150            6 VLQSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNV   71 (198)
Q Consensus         6 ~~~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~a   71 (198)
                      ..+.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...+++..|+++|. .+||.+
T Consensus        19 ~~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~-~~Gy~~   84 (85)
T 2k2p_A           19 FQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIIT-AAGYTP   84 (85)
T ss_dssp             ---CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHH-HTTCCC
T ss_pred             ccccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHH-HcCCCC
Confidence            45677899996 999999999999999999999999999999999998899999999998 899865

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A

Probab=99.19  E-value=1.4e-10  Score=77.91  Aligned_cols=66  Identities=15%  Similarity=0.253  Sum_probs=58.3

Q ss_pred             ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeC-CHHHHHHHHHhccCCceEEc
Q 029150            8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTM-DVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus         8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~v-dp~~L~~~L~kk~G~~aeiV   74 (198)
                      |++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.... ....|...|. .+||.+...
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~-~~Gy~~~~~   69 (73)
T 1mwy_A            2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQ-KAGYSLRDE   69 (73)
T ss_dssp             CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHH-HHTCEEEEC
T ss_pred             CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHH-HcCCccccc
Confidence            567899997 99999999999999999999999999999999998653 3678888898 899987654

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A

Probab=99.19  E-value=8.9e-11  Score=83.88  Aligned_cols=70  Identities=17%  Similarity=0.276  Sum_probs=61.0

Q ss_pred             eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---eCCHHHHHHHHHhcc---CCceEEcCCCCC
Q 029150            9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKL---KRNVEVVPAKKD   79 (198)
Q Consensus         9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G---~vdp~~L~~~L~kk~---G~~aeiV~p~k~   79 (198)
                      ++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|..   .+++..|..+|. .+   ||.+.++.+...
T Consensus         3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~-~~g~Ggy~~~~~~~~~~   79 (90)
T 2g9o_A            3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIE-AVSPGLYRVSITSEVEI   79 (90)
T ss_dssp             EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHH-TTSTTTCEEECCCCC--
T ss_pred             cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHH-hccCCCeEEEEeCCCcc
Confidence            56789996 999999999999999999999999999999999985   367889999998 88   599988876543

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A

Probab=99.18  E-value=1.2e-10  Score=75.29  Aligned_cols=63  Identities=17%  Similarity=0.356  Sum_probs=56.2

Q ss_pred             ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCce
Q 029150            8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNV   71 (198)
Q Consensus         8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~a   71 (198)
                      |.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...   ++...|...|. .+||.+
T Consensus         1 m~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~   67 (69)
T 2qif_A            1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIE-DQGYDV   67 (69)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCEE
T ss_pred             CeEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCc
Confidence            356789997 9999999999999999999999999999999999843   67889999998 899865

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A

Probab=99.18  E-value=9.1e-11  Score=81.85  Aligned_cols=71  Identities=18%  Similarity=0.282  Sum_probs=63.0

Q ss_pred             ccceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEcCCC
Q 029150            6 VLQSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVVPAK   77 (198)
Q Consensus         6 ~~~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV~p~   77 (198)
                      ....+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...   +++..|...|. .+||.+.++...
T Consensus         6 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~~   80 (84)
T 1q8l_A            6 AGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE-AMGFPAFVKKQP   80 (84)
T ss_dssp             SSCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEECSCCT
T ss_pred             cCceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEecCCc
Confidence            45678899996 9999999999999999999999999999999999864   57899999998 999998876543

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A

Probab=99.17  E-value=2.3e-10  Score=76.89  Aligned_cols=65  Identities=17%  Similarity=0.325  Sum_probs=58.5

Q ss_pred             eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEc
Q 029150            9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus         9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV   74 (198)
                      .+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...   ++...|...|. .+||.+.++
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~   70 (75)
T 3cjk_B            2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIH   70 (75)
T ss_dssp             EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEEEE
T ss_pred             cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEee
Confidence            45789996 9999999999999999999999999999999999853   57899999998 899988764

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A

Probab=99.17  E-value=1.3e-10  Score=79.12  Aligned_cols=68  Identities=16%  Similarity=0.278  Sum_probs=60.7

Q ss_pred             cceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEcC
Q 029150            7 LQSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVVP   75 (198)
Q Consensus         7 ~~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV~   75 (198)
                      ...+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...   ++...|...|. .+||.+.+..
T Consensus         6 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~   77 (79)
T 1kvi_A            6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIHN   77 (79)
T ss_dssp             TCEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHCCCEEECC
T ss_pred             CcEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HCCCceEecC
Confidence            3567889996 9999999999999999999999999999999999853   57889999998 8999987754

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B

Probab=99.16  E-value=1e-10  Score=77.49  Aligned_cols=66  Identities=17%  Similarity=0.320  Sum_probs=59.3

Q ss_pred             eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee--CCHHHHHHHHHhccCCceEEcC
Q 029150            9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT--MDVKELVPYLKEKLKRNVEVVP   75 (198)
Q Consensus         9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~--vdp~~L~~~L~kk~G~~aeiV~   75 (198)
                      ++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...  ++...|...|. .+||.+.++.
T Consensus         2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~~~~~   70 (72)
T 1fvq_A            2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIE-DCGFDCEILR   70 (72)
T ss_dssp             EEEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHH-HHTCCEEEEE
T ss_pred             eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHH-HCCCceEEcc
Confidence            46789996 9999999999999999999999999999999999853  67889999998 8999988763

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1

Probab=99.16  E-value=1.5e-10  Score=75.68  Aligned_cols=63  Identities=21%  Similarity=0.453  Sum_probs=56.7

Q ss_pred             EEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEc
Q 029150           11 VVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus        11 vvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV   74 (198)
                      ++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...   ++...|...|. .+||.++++
T Consensus         2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~   68 (68)
T 1cpz_A            2 QEFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAIN-ELGYQAEVI   68 (68)
T ss_dssp             CEEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-TTSSCEEEC
T ss_pred             EEEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCcccC
Confidence            367886 9999999999999999999999999999999999864   67899999998 899988764

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A

Probab=99.15  E-value=8.7e-11  Score=79.78  Aligned_cols=67  Identities=12%  Similarity=0.366  Sum_probs=60.4

Q ss_pred             ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEcC
Q 029150            8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVVP   75 (198)
Q Consensus         8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV~   75 (198)
                      |++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...   +++..|...|. .+||.+.++.
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~   72 (77)
T 1y3j_A            2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIR-ELGFGATVIE   72 (77)
T ss_dssp             CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHH-HHTSCEEEES
T ss_pred             CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEECC
Confidence            567889996 9999999999999999999999999999999999853   67889999998 8999987754

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A

Probab=99.14  E-value=1.7e-10  Score=76.78  Aligned_cols=66  Identities=18%  Similarity=0.380  Sum_probs=59.0

Q ss_pred             ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---eCCHHHHHHHHHhccCCceEEc
Q 029150            8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus         8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G---~vdp~~L~~~L~kk~G~~aeiV   74 (198)
                      +.+++|+|. |+|.+|+.+|+++|.+++||.++.+|+..++++|..   .++...|...|. .+||.+.++
T Consensus         5 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~   74 (76)
T 1opz_A            5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHVVIE   74 (76)
T ss_dssp             CEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHTCEEECC
T ss_pred             ceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HCCCceecC
Confidence            567889997 999999999999999999999999999999999974   367889999998 899987654

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}

Probab=99.12  E-value=8.1e-11  Score=78.29  Aligned_cols=62  Identities=23%  Similarity=0.342  Sum_probs=55.3

Q ss_pred             EEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEc
Q 029150           10 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus        10 tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV   74 (198)
                      +++|.|. |+|.+|+.+|+++|.++ ||.++.+|+.+++++|....+ ..|...|+ .+||.+..+
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~-~~Gy~~~~~   64 (67)
T 2kyz_A            2 RYVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLE-EIDYPVESY   64 (67)
T ss_dssp             EEEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHH-TTTCCCCBC
T ss_pred             eEEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHH-HcCCceeeE
Confidence            4678995 99999999999999999 999999999999999987755 88999998 899987543

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A

Probab=99.12  E-value=2.1e-10  Score=75.73  Aligned_cols=62  Identities=19%  Similarity=0.326  Sum_probs=55.8

Q ss_pred             EEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee--CCHHHHHHHHHhccCCceEEc
Q 029150           12 VLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT--MDVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus        12 vLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~--vdp~~L~~~L~kk~G~~aeiV   74 (198)
                      +|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...  .+...|+..|. .+||.+.+.
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~~~~~   67 (69)
T 2kt2_A            3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVA-GLGYKATLA   67 (69)
T ss_dssp             CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHH-TTTSEEECC
T ss_pred             EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHH-HCCCceEeC
Confidence            57886 9999999999999999999999999999999999754  57899999998 999987654

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=99.12  E-value=2e-10  Score=96.86  Aligned_cols=71  Identities=18%  Similarity=0.429  Sum_probs=64.8

Q ss_pred             ceEEEEEEeecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEcCCCCC
Q 029150            8 QSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPAKKD   79 (198)
Q Consensus         8 ~~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV~p~k~   79 (198)
                      ..+++|+|.|+|.+|+.+|+++|.+++||.++.+|+.+++++|.+.+++..|+++|+ ++||.+.++.....
T Consensus         5 ~~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~-~~Gy~a~~~~~~~~   75 (222)
T 1qup_A            5 TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGKDAIIRGAGKP   75 (222)
T ss_dssp             CEEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHH-HTTCCCEEECCSCT
T ss_pred             ceEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHH-HcCCccccccCCCc
Confidence            456788899999999999999999999999999999999999999899999999999 99999988765443

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}

Probab=99.10  E-value=1.9e-10  Score=74.77  Aligned_cols=61  Identities=20%  Similarity=0.341  Sum_probs=54.6

Q ss_pred             EEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee--CCHHHHHHHHHhccCCce
Q 029150           10 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT--MDVKELVPYLKEKLKRNV   71 (198)
Q Consensus        10 tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~--vdp~~L~~~L~kk~G~~a   71 (198)
                      +++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...  .+...|.+.|+ .+||.+
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~   65 (66)
T 1yg0_A            2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALL-DAGQEV   65 (66)
T ss_dssp             EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHH-HHTCCC
T ss_pred             eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHH-HcCCCc
Confidence            4678886 9999999999999999999999999999999999854  47889999998 888864

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}

Probab=99.10  E-value=2.1e-10  Score=75.00  Aligned_cols=64  Identities=17%  Similarity=0.321  Sum_probs=57.1

Q ss_pred             ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceE
Q 029150            8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVE   72 (198)
Q Consensus         8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~ae   72 (198)
                      +.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...   ++...|...|. .+||.+.
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~   69 (71)
T 2ldi_A            2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIA-ALGYTLA   69 (71)
T ss_dssp             CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHH-TTTCEEE
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCcc
Confidence            456789997 9999999999999999999999999999999999853   57788999998 8999764

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A

Probab=99.09  E-value=4.3e-10  Score=76.07  Aligned_cols=68  Identities=24%  Similarity=0.393  Sum_probs=60.3

Q ss_pred             ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---eCCHHHHHHHHHhccCCceEEcCC
Q 029150            8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVPA   76 (198)
Q Consensus         8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G---~vdp~~L~~~L~kk~G~~aeiV~p   76 (198)
                      |.++.|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|..   .++...|...|. .+||.+.++..
T Consensus         2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~~   73 (80)
T 1jww_A            2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKGE   73 (80)
T ss_dssp             CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHH-HHTSEEEECCS
T ss_pred             ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCeEEecCc
Confidence            457789997 999999999999999999999999999999999974   367889999998 89999877643

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A

Probab=99.08  E-value=3.5e-10  Score=75.42  Aligned_cols=65  Identities=17%  Similarity=0.395  Sum_probs=57.4

Q ss_pred             eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEc
Q 029150            9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus         9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV   74 (198)
                      .+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...   +++..|...|. .+||.+.+.
T Consensus         4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~   72 (75)
T 1yjr_A            4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIE-SLGFEPSLV   72 (75)
T ss_dssp             CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHH-HHHCEEEES
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCceee
Confidence            45788996 9999999999999999999999999999999999864   46788999998 899987654

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=99.03  E-value=5.5e-10  Score=95.92  Aligned_cols=68  Identities=18%  Similarity=0.441  Sum_probs=63.1

Q ss_pred             ceEEEEEEeecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEcCC
Q 029150            8 QSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVPA   76 (198)
Q Consensus         8 ~~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV~p   76 (198)
                      ..+++|+|.|+|.+|+.+|+++|.+++||.++.+|+.+++++|.+.+++..|+++|+ ++||.+.++..
T Consensus         6 ~~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe-~~Gy~a~~~~~   73 (249)
T 1jk9_B            6 TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGKDAIIRGA   73 (249)
T ss_dssp             CEEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHH-TTTCCCEEEEE
T ss_pred             ceeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHH-HhCCCcccccC
Confidence            456788889999999999999999999999999999999999998899999999999 99999987654

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=99.03  E-value=5.9e-10  Score=84.76  Aligned_cols=70  Identities=23%  Similarity=0.391  Sum_probs=62.3

Q ss_pred             ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---eCCHHHHHHHHHhccCCceEEcCCCC
Q 029150            8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVPAKK   78 (198)
Q Consensus         8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G---~vdp~~L~~~L~kk~G~~aeiV~p~k   78 (198)
                      ..+++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|..   .+++..|+++|. .+||.+.++.+..
T Consensus        73 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~~~  146 (151)
T 1p6t_A           73 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKGEQD  146 (151)
T ss_dssp             CEEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCSSS
T ss_pred             ccccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCCeEEcCccc
Confidence            356789996 999999999999999999999999999999999984   478999999998 9999998875543

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=99.01  E-value=1e-09  Score=82.81  Aligned_cols=65  Identities=14%  Similarity=0.386  Sum_probs=59.0

Q ss_pred             eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEc
Q 029150            9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus         9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV   74 (198)
                      .+++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|...   +++..|++.|. .+||.+.++
T Consensus        80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~  148 (149)
T 2ew9_A           80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIE-EIGFHASLA  148 (149)
T ss_dssp             SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHH-HHTCEEECC
T ss_pred             ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHH-hCCCceEec
Confidence            56889996 9999999999999999999999999999999999854   68899999998 999987654

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}

Probab=99.00  E-value=1.9e-09  Score=76.99  Aligned_cols=70  Identities=13%  Similarity=0.154  Sum_probs=62.0

Q ss_pred             ccceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEcCC
Q 029150            6 VLQSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVVPA   76 (198)
Q Consensus         6 ~~~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV~p   76 (198)
                      ..+.+++|.|. |+|.+|+.+|+++|.+++||.++.+|+..++++|...   +++..|...|. .+||.+.++..
T Consensus        13 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~   86 (95)
T 2kkh_A           13 KKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALN-EARLEANVRVN   86 (95)
T ss_dssp             SCSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCC
T ss_pred             cceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCceEEecC
Confidence            35678899996 9999999999999999999999999999999999854   57889999998 89999877644

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A

Probab=98.91  E-value=1.7e-09  Score=72.37  Aligned_cols=59  Identities=19%  Similarity=0.416  Sum_probs=50.7

Q ss_pred             eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceE
Q 029150            9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVE   72 (198)
Q Consensus         9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~ae   72 (198)
                      ++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.+..+    ...|. .+||.+.
T Consensus         3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~-~~Gy~~~   62 (71)
T 2aj0_A            3 EKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVE-QAGAFEH   62 (71)
T ss_dssp             CEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHH-HHHTTTT
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHH-HhCCCcc
Confidence            46789997 999999999999999999999999999999999997764    44666 7777543

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.87  E-value=7.1e-09  Score=83.68  Aligned_cols=67  Identities=22%  Similarity=0.424  Sum_probs=59.7

Q ss_pred             eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCceEEcCC
Q 029150            9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNVEVVPA   76 (198)
Q Consensus         9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~aeiV~p   76 (198)
                      .+++|+|. |+|.+|+.+|+++|.+++||.++.||+.+++++|...   +++..|+..|. .+||.+.++..
T Consensus       122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~  192 (202)
T 2rop_A          122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIE-DMGFEASVVSE  192 (202)
T ss_dssp             EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTSCEEEC--
T ss_pred             eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCceEEcCC
Confidence            56889996 9999999999999999999999999999999999853   68899999998 89999988754

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=98.84  E-value=1.2e-08  Score=76.93  Aligned_cols=67  Identities=21%  Similarity=0.389  Sum_probs=60.3

Q ss_pred             ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---eCCHHHHHHHHHhccCCceEEcC
Q 029150            8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVP   75 (198)
Q Consensus         8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G---~vdp~~L~~~L~kk~G~~aeiV~   75 (198)
                      +++++|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|..   .+++..|..+|. .+||.+.++.
T Consensus         3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~   73 (149)
T 2ew9_A            3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQ-DLGFEAAVME   73 (149)
T ss_dssp             CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEECS
T ss_pred             cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHh-cCCCceEeec
Confidence            678899996 999999999999999999999999999999999975   367889999998 8999887754

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.57  E-value=1.4e-07  Score=75.94  Aligned_cols=66  Identities=23%  Similarity=0.349  Sum_probs=56.2

Q ss_pred             cceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhcc---CCceEE
Q 029150            7 LQSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKL---KRNVEV   73 (198)
Q Consensus         7 ~~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~---G~~aei   73 (198)
                      .+.+++|.|. |+|.+|+.+|+++|.+++||.++.||+.+++++|...   +++..|...|. .+   |+.+.+
T Consensus        18 ~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~~~gg~~v~~   90 (202)
T 2rop_A           18 HVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIE-ALPPGNFKVSL   90 (202)
T ss_dssp             --CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHT-TSSSSCSEEEC
T ss_pred             ccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HhccCCeEEEe
Confidence            3567889997 9999999999999999999999999999999999854   67889999998 66   366643

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=98.50  E-value=3.1e-07  Score=69.48  Aligned_cols=63  Identities=19%  Similarity=0.402  Sum_probs=55.2

Q ss_pred             ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee---CCHHHHHHHHHhccCCce
Q 029150            8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT---MDVKELVPYLKEKLKRNV   71 (198)
Q Consensus         8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~---vdp~~L~~~L~kk~G~~a   71 (198)
                      +++++|.|. |+|.+|+.+|+++|.+++||.++.+++.+++++|...   ++...|...|. .+|+.+
T Consensus         5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~   71 (151)
T 1p6t_A            5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHV   71 (151)
T ss_dssp             CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHH-HHTCEE
T ss_pred             ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHH-HcCCcc
Confidence            456789996 9999999999999999999999999999999998743   57888999998 888854

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.37  E-value=7.7e-07  Score=85.81  Aligned_cols=63  Identities=14%  Similarity=0.350  Sum_probs=57.6

Q ss_pred             eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---eCCHHHHHHHHHhccCCceE
Q 029150            9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVE   72 (198)
Q Consensus         9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G---~vdp~~L~~~L~kk~G~~ae   72 (198)
                      ++++|+|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|+.   .++++.|++.|+ ++||++.
T Consensus         2 m~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~-~~Gy~~~   68 (723)
T 3j09_A            2 MERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIE-DLGYGVV   68 (723)
T ss_dssp             CCEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHCCEES
T ss_pred             eeEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHH-hcCCccc
Confidence            35789997 999999999999999999999999999999999974   378999999999 8999874

>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1

Probab=90.19  E-value=1.3  Score=33.06  Aligned_cols=69  Identities=17%  Similarity=0.209  Sum_probs=49.6

Q ss_pred             ccceEEEEEEeecChhHHHHHHHHHhcCCCccEEEE-----eCCCC--eEEEeee-CCHHHHHHHHHhccCCceEEcC
Q 029150            6 VLQSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTI-----DGGKD--LVTVKGT-MDVKELVPYLKEKLKRNVEVVP   75 (198)
Q Consensus         6 ~~~~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~V-----D~~~~--kVtV~G~-vdp~~L~~~L~kk~G~~aeiV~   75 (198)
                      -..+.++|-|----+--.-.+-+.|.+++||..|.+     |..+.  ++||.|. +|-+.|.++|. .+|-.+.++.
T Consensus         4 ~~iRRlVLDVlKPh~P~ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE-~~GgvIHSID   80 (100)
T 3bpd_A            4 KGLRRLVLDVLKPHEPKTIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIE-DMGGVIHSVD   80 (100)
T ss_dssp             CSEEEEEEEEEEESCSCHHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHH-TTTCEEEEEE
T ss_pred             ccceEEEEEecCCCCCCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEeee
Confidence            345778888852234445578888999999888764     44444  3456676 99999999999 9998876653

>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}

Probab=86.95  E-value=2.6  Score=31.18  Aligned_cols=66  Identities=18%  Similarity=0.328  Sum_probs=48.2

Q ss_pred             ceEEEEEEe--ecChhHHHHHHHHHhcCCCccEEEE-----eCCCC--eEEEeee-CCHHHHHHHHHhccCCceEEcC
Q 029150            8 QSTVVLKIR--LHCEGCISKIKKIIYKTKGVDNVTI-----DGGKD--LVTVKGT-MDVKELVPYLKEKLKRNVEVVP   75 (198)
Q Consensus         8 ~~tvvLkV~--MhC~gCa~kI~kaL~kl~GV~sV~V-----D~~~~--kVtV~G~-vdp~~L~~~L~kk~G~~aeiV~   75 (198)
                      .+.++|-|-  +|-..- -.+-+.|.+++||..|.+     |..+.  ++||.|. +|-+.|.++|. ++|-.+.++.
T Consensus         4 irRlVLDVlKP~h~P~i-vd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE-~~Gg~IHSID   79 (96)
T 2x3d_A            4 IRRLVLDVLKPIRGTSI-VDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLE-EEGCAIHSID   79 (96)
T ss_dssp             EEEEEEEEEEESSSSCH-HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHH-HTTCEEEEEE
T ss_pred             eEEEEEEcccCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEeee
Confidence            467778774  455544 467788999999888764     33433  3456686 99999999999 8998877663

>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1

Probab=86.93  E-value=2.1  Score=31.74  Aligned_cols=67  Identities=25%  Similarity=0.365  Sum_probs=47.9

Q ss_pred             cceEEEEEEeecChhHHHHHHHHHhcCCCccEEEE-----eCCCCe--EEEeee-CCHHHHHHHHHhccCCceEEc
Q 029150            7 LQSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTI-----DGGKDL--VTVKGT-MDVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus         7 ~~~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~V-----D~~~~k--VtV~G~-vdp~~L~~~L~kk~G~~aeiV   74 (198)
                      ..+.++|-|----+--.-.+-+.|.++.||..|.+     |..+..  +||.|. +|-+.|.++|. .+|-.+.++
T Consensus         5 ~irRlVLDVlKPh~p~i~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE-~~Gg~IHSI   79 (97)
T 2raq_A            5 GLIRIVLDILKPHEPIIPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIE-SYGGSIHSV   79 (97)
T ss_dssp             SEEEEEEEEECCSCSCHHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHH-HTTCEEEEE
T ss_pred             CceEEEEEecCCCCCCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEee
Confidence            35677887752233345577888999999887764     444444  455676 99999999999 899887665

>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*

Probab=84.69  E-value=0.84  Score=33.12  Aligned_cols=35  Identities=17%  Similarity=0.478  Sum_probs=28.4

Q ss_pred             EEEEEEeecChhHH------HHHHHHHhcCCCccEEEEeCC
Q 029150           10 TVVLKIRLHCEGCI------SKIKKIIYKTKGVDNVTIDGG   44 (198)
Q Consensus        10 tvvLkV~MhC~gCa------~kI~kaL~kl~GV~sV~VD~~   44 (198)
                      .+.+.+.+.+.+|.      ..|+.+|..++||.+|.|++.
T Consensus        42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~   82 (103)
T 3cq1_A           42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT   82 (103)
T ss_dssp             EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred             EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEe
Confidence            56677778887774      678999999999999988854

>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0

Probab=84.22  E-value=0.85  Score=33.54  Aligned_cols=37  Identities=19%  Similarity=0.465  Sum_probs=29.4

Q ss_pred             eEEEEEEeecChhH------HHHHHHHH-hcCCCccEEEEeCCC
Q 029150            9 STVVLKIRLHCEGC------ISKIKKII-YKTKGVDNVTIDGGK   45 (198)
Q Consensus         9 ~tvvLkV~MhC~gC------a~kI~kaL-~kl~GV~sV~VD~~~   45 (198)
                      ..+.+.+.++..+|      ...|+.+| ..++||.+|.|++.-
T Consensus        44 ~~V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~~   87 (108)
T 3lno_A           44 NNAVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVVW   87 (108)
T ss_dssp             CCEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEECC
T ss_pred             CeEEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEEe
Confidence            45777777877777      56789999 899999999887653

>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A

Probab=81.74  E-value=0.96  Score=32.74  Aligned_cols=36  Identities=25%  Similarity=0.379  Sum_probs=27.9

Q ss_pred             eEEEEEEeecChhHH------HHHHHHHhcCCCccEEEEeCC
Q 029150            9 STVVLKIRLHCEGCI------SKIKKIIYKTKGVDNVTIDGG   44 (198)
Q Consensus         9 ~tvvLkV~MhC~gCa------~kI~kaL~kl~GV~sV~VD~~   44 (198)
                      ..+.+.+.+++.+|.      ..|+.+|..++||.+|.|++.
T Consensus        42 ~~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~   83 (103)
T 1uwd_A           42 NNVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELT   83 (103)
T ss_dssp             CEEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEEC
T ss_pred             CEEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEe
Confidence            456677777777664      568899999999999988754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	198
d1qupa2	72	d.58.17.1 (A:2-73) Copper chaperone for superoxide	8e-08
d1cc8a_	72	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	5e-07
d1osda_	72	d.58.17.1 (A:) Mercuric ion binding protein MerP {	6e-06
d2ggpb1	72	d.58.17.1 (B:1-72) Copper transporter domain ccc2a	6e-06
d1sb6a_	64	d.58.17.1 (A:) Copper chaperone {Synechocystis sp.	2e-05
d1fe0a_	66	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	5e-05
d1p6ta1	72	d.58.17.1 (A:1-72) Potential copper-translocating	8e-05
d1kvja_	79	d.58.17.1 (A:) Menkes copper-transporting ATPase {	1e-04
d2aw0a_	72	d.58.17.1 (A:) Menkes copper-transporting ATPase {	1e-04
d1mwza_	73	d.58.17.1 (A:) Metal ion-transporting ATPase ZntA,	3e-04
d1p6ta2	79	d.58.17.1 (A:73-151) Potential copper-translocatin	4e-04
d2qifa1	69	d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt	6e-04
d1cpza_	68	d.58.17.1 (A:) Copper chaperone {Enterococcus hira	0.002
d1q8la_	84	d.58.17.1 (A:) Menkes copper-transporting ATPase {	0.004

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.5 bits (108), Expect = 8e-08
 Identities = 10/51 (19%), Positives = 27/51 (52%)

Query: 10 TVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELV 60
               I +HCE C++ IK  +    G++++  D  + +++V+ ++    ++
Sbjct: 7  EATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTII 57

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.2 bits (102), Expect = 5e-07
 Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 10 TVVLKIRLHCEGCISKIKKIIYKTK-GVDNVTIDGGKDLVTVKGTMDVKELVPYLKE 65
               + + C GC   + K++ K +  V  + I   K LV V  T+    ++  +K+
Sbjct: 5  HYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKK 61

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

 Score = 40.5 bits (95), Expect = 6e-06
 Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 4/55 (7%)

Query: 10 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK---GTMDVKELV 60
          TV L +  + C  C   +KK I K +GV  V +        V        V++L 
Sbjct: 4  TVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLT 58

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.5 bits (95), Expect = 6e-06
 Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 3/54 (5%)

Query: 10 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTID--GGKDLVTVKGTMDVKELV 60
           V+L +  + C  C + I   +   KGV    I     +  VT    +    + 
Sbjct: 3  EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIK 56

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

 Score = 39.2 bits (91), Expect = 2e-05
 Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 1/52 (1%)

Query: 10 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELV 60
          T+ L +  + CE C   + K +        V +D     VT+   +  ++L 
Sbjct: 2  TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLR 53

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

 Score = 37.9 bits (88), Expect = 5e-05
 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 13 LKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVE 72
            + + C GC   + +++ K  GV    ID     V ++    +  L+  L +K  + V 
Sbjct: 5  FSVDMTCGGCAEAVSRVLNKLGGVK-YDIDLPNKKVCIESEHSMDTLLATL-KKTGKTVS 62

Query: 73 VV 74
           +
Sbjct: 63 YL 64

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 37.4 bits (87), Expect = 8e-05
 Identities = 9/57 (15%), Positives = 24/57 (42%), Gaps = 4/57 (7%)

Query: 8  QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK---GTMDVKELV 60
          Q  + +++  + C  C ++I+K + +  GV +  ++   + V V           + 
Sbjct: 5  QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQ 61

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (86), Expect = 1e-04
 Identities = 9/44 (20%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 9  STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK 51
          ++V + +  + C  C+  I++ I K  GV ++ +   +   T+ 
Sbjct: 8  NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATII 51

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (85), Expect = 1e-04
 Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 4/55 (7%)

Query: 10 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK---GTMDVKELV 60
            V+ I  + C  C+  I+ +I K  GV ++ +       TV+        + L 
Sbjct: 4  ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLR 58

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 35.9 bits (83), Expect = 3e-04
 Identities = 9/51 (17%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 9  STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKE 58
          +    K+  + C  C  K++  + +  GV+ V +    + + V    D++ 
Sbjct: 3  TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRA 53

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 35.6 bits (82), Expect = 4e-04
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 10 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK---GTMDVKELV 60
               I  + C  C ++I+K + K +GV N  ++   + VTV+       V +L 
Sbjct: 3  KAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLK 57

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

 Score = 34.8 bits (80), Expect = 6e-04
 Identities = 8/43 (18%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 10 TVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK 51
             L++  + C+ C+  ++  + +  GV  V ++     V V 
Sbjct: 3  QKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVS 45

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

 Score = 33.2 bits (76), Expect = 0.002
 Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 3/47 (6%)

Query: 17 LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK---GTMDVKELV 60
          + C  C+++I++ + +  GV  V +   K+   VK     +   E+ 
Sbjct: 9  MSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEIC 55

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (75), Expect = 0.004
 Identities = 9/36 (25%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 8  QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTID 42
          +  + +K+  + C  C S I+  I K +GV  + + 
Sbjct: 8  EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVS 43

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	198
d1cc8a_	72	ATX1 metallochaperone protein (ATOX1) {Baker's yea	99.69
d1fe0a_	66	ATX1 metallochaperone protein (ATOX1) {Human (Homo	99.69
d1qupa2	72	Copper chaperone for superoxide dismutase, N-termi	99.68
d1sb6a_	64	Copper chaperone {Synechocystis sp. pcc 6803, Scat	99.56
d2ggpb1	72	Copper transporter domain ccc2a {Baker's yeast (Sa	99.52
d2qifa1	69	Copper chaperone {Bacillus subtilis, CopZ [TaxId:	99.51
d1osda_	72	Mercuric ion binding protein MerP {Ralstonia metal	99.49
d1cpza_	68	Copper chaperone {Enterococcus hirae [TaxId: 1354]	99.49
d1kvja_	79	Menkes copper-transporting ATPase {Human (Homo sap	99.48
d2aw0a_	72	Menkes copper-transporting ATPase {Human (Homo sap	99.47
d1q8la_	84	Menkes copper-transporting ATPase {Human (Homo sap	99.45
d1p6ta1	72	Potential copper-translocating P-type ATPase CopA	99.43
d1p6ta2	79	Potential copper-translocating P-type ATPase CopA	99.41
d1mwza_	73	Metal ion-transporting ATPase ZntA, N-terminal dom	99.41
d2cu6a1	91	Hypothetical protein TTHB138 {Thermus thermophilus	88.68
d3bpda1	91	Uncharacterized protein AF1549 {Archaeoglobus fulg	87.91
d1uwda_	102	Hypothetical protein TM0487 {Thermotoga maritima [	87.71
d2raqa1	93	Uncharacterized protein MTH889 {Methanobacterium t	87.38

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.69  E-value=6.3e-17  Score=113.40  Aligned_cols=66  Identities=23%  Similarity=0.372  Sum_probs=62.3

Q ss_pred             cceEEEEEEeecChhHHHHHHHHHhcC-CCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEE
Q 029150            7 LQSTVVLKIRLHCEGCISKIKKIIYKT-KGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEV   73 (198)
Q Consensus         7 ~~~tvvLkV~MhC~gCa~kI~kaL~kl-~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aei   73 (198)
                      ++++++|+|+|||.+|+++|+++|.++ +||.+|.+|+.+++|+|+|.++++.|+++|+ ++||+|..
T Consensus         2 ~~kt~~f~V~MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~~~~~~i~~~i~-~~G~~~~~   68 (72)
T d1cc8a_           2 EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIK-KTGKEVRS   68 (72)
T ss_dssp             CCEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHH-TTSSCEEE
T ss_pred             CcEEEEEEECcCcHHHHHHHHHHHHcCcCceEEEEEECCCCEEEEeecCCHHHHHHHHH-HHCCccCC
Confidence            468999999999999999999999999 4999999999999999999999999999998 99998863

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

Probab=99.69  E-value=3.8e-17  Score=112.77  Aligned_cols=64  Identities=22%  Similarity=0.423  Sum_probs=61.0

Q ss_pred             EEEEEEeecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEcC
Q 029150           10 TVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVP   75 (198)
Q Consensus        10 tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV~   75 (198)
                      +++|+|+|||.+|+++|+++|.+++|| +|.+|+.+++|+|+|+++++.|+++|+ ++||++.+++
T Consensus         2 k~ef~V~M~C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~~~~~~i~~~I~-~~Gy~a~lig   65 (66)
T d1fe0a_           2 KHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLK-KTGKTVSYLG   65 (66)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHH-TTTSCEEEEE
T ss_pred             CEEEEEccCchHHHHHHHHHHhcCCCc-EEEEEcCCCEEEEEeeCCHHHHHHHHH-HhCCeEEEee
Confidence            578999999999999999999999998 699999999999999999999999998 9999999874

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.68  E-value=6.8e-17  Score=113.02  Aligned_cols=67  Identities=16%  Similarity=0.435  Sum_probs=63.4

Q ss_pred             ceEEEEEEeecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceEEcC
Q 029150            8 QSTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVEVVP   75 (198)
Q Consensus         8 ~~tvvLkV~MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~aeiV~   75 (198)
                      ...++|.|+|||.+|+++|+++|.+++||.+|.||+.+++|+|+|.+++++|+++|+ ++||+|.+.+
T Consensus         5 ~~~~~f~V~M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~~~~~~i~~~I~-~~G~~A~l~g   71 (72)
T d1qupa2           5 TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGKDAIIRG   71 (72)
T ss_dssp             CEEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHH-HTTCCCEEEC
T ss_pred             cEEEEEEEccCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEeeCCHHHHHHHHH-HhCCCEEEec
Confidence            456789999999999999999999999999999999999999999999999999998 9999998864

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

Probab=99.56  E-value=8.8e-16  Score=104.67  Aligned_cols=63  Identities=21%  Similarity=0.379  Sum_probs=59.7

Q ss_pred             eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeeeCCHHHHHHHHHhccCCceE
Q 029150            9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGTMDVKELVPYLKEKLKRNVE   72 (198)
Q Consensus         9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~vdp~~L~~~L~kk~G~~ae   72 (198)
                      ++++|+|. |+|.+|+.+|+++|.+++||.+|.+|+.+++|+|++.++++.|+++|. .+||+++
T Consensus         1 Mt~~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~~~~~~i~~~i~-~~GY~ve   64 (64)
T d1sb6a_           1 MTIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIA-SAGHEVE   64 (64)
T ss_dssp             CEEEEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESSSCHHHHHHHHH-HHCCCCC
T ss_pred             CeEEEEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccCCCHHHHHHHHH-HcCCCCC
Confidence            36889996 999999999999999999999999999999999999999999999998 9999874

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.52  E-value=9.5e-15  Score=101.46  Aligned_cols=66  Identities=17%  Similarity=0.319  Sum_probs=61.8

Q ss_pred             eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee--eCCHHHHHHHHHhccCCceEEcC
Q 029150            9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG--TMDVKELVPYLKEKLKRNVEVVP   75 (198)
Q Consensus         9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G--~vdp~~L~~~L~kk~G~~aeiV~   75 (198)
                      ++++|.|. |+|.+|+.+|+++|.+++||.++.||+.+++++|+.  .+++..|+++|+ .+||+++++.
T Consensus         2 k~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~a~~~~   70 (72)
T d2ggpb1           2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIE-DCGFDCEILR   70 (72)
T ss_dssp             EEEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHH-HTTCCCEEEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHH-HhCCCeEEcc
Confidence            68999997 999999999999999999999999999999999984  589999999999 9999999874

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

Probab=99.51  E-value=3.3e-14  Score=97.84  Aligned_cols=63  Identities=17%  Similarity=0.356  Sum_probs=58.9

Q ss_pred             ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---eCCHHHHHHHHHhccCCce
Q 029150            8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNV   71 (198)
Q Consensus         8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G---~vdp~~L~~~L~kk~G~~a   71 (198)
                      |++++|+|+ |+|.+|+.+|+++|++++||.+|.||+.+++|+|+.   .++...|++.|+ .+||++
T Consensus         1 M~~~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~-~~Gy~~   67 (69)
T d2qifa1           1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIE-DQGYDV   67 (69)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCEE
T ss_pred             CcEEEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHH-HhCCcc
Confidence            578899997 999999999999999999999999999999999995   379999999999 899976

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

Probab=99.49  E-value=3.7e-14  Score=98.41  Aligned_cols=66  Identities=24%  Similarity=0.304  Sum_probs=61.4

Q ss_pred             ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---eCCHHHHHHHHHhccCCceEEc
Q 029150            8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus         8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G---~vdp~~L~~~L~kk~G~~aeiV   74 (198)
                      .++++|+|. |+|.+|+.+|+++|.+++||.++.||+.+++++|+-   .+++..|+++|+ .+||++.+.
T Consensus         2 tqt~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~a~v~   71 (72)
T d1osda_           2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA-DAGYPSSVK   71 (72)
T ss_dssp             EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHH-HTTCCCEEC
T ss_pred             CeEEEEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHH-hcCCCeEeC
Confidence            578999997 999999999999999999999999999999999984   488999999999 999999863

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

Probab=99.49  E-value=4.3e-14  Score=97.05  Aligned_cols=62  Identities=21%  Similarity=0.471  Sum_probs=58.0

Q ss_pred             EEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---eCCHHHHHHHHHhccCCceEEc
Q 029150           12 VLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus        12 vLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G---~vdp~~L~~~L~kk~G~~aeiV   74 (198)
                      .|+|+ |+|.+|+.+|+++|++++||.+|.||+.+++|+|+.   .+++..|+++|+ .+||+++++
T Consensus         3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~-~~Gy~a~vi   68 (68)
T d1cpza_           3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAIN-ELGYQAEVI   68 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-TTSSCEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHH-hhCCCcEEC
Confidence            58996 999999999999999999999999999999999984   479999999999 999999875

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1e-13  Score=97.78  Aligned_cols=70  Identities=16%  Similarity=0.273  Sum_probs=64.8

Q ss_pred             ccceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---eCCHHHHHHHHHhccCCceEEcCC
Q 029150            6 VLQSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVPA   76 (198)
Q Consensus         6 ~~~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G---~vdp~~L~~~L~kk~G~~aeiV~p   76 (198)
                      ..+.+++|.|+ |+|.+|+.+|+++|++++||.++.||+.+++|+|+.   .+++..|+++|+ ++||++.+..|
T Consensus         5 ~~~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~-~~GY~~~~~~~   78 (79)
T d1kvja_           5 MGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIHNP   78 (79)
T ss_dssp             TTCEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEECSC
T ss_pred             CCceEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHH-hcCCCcEeCCC
Confidence            35788999997 999999999999999999999999999999999994   489999999999 99999998765

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=7.1e-14  Score=96.74  Aligned_cols=66  Identities=18%  Similarity=0.341  Sum_probs=60.9

Q ss_pred             ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---eCCHHHHHHHHHhccCCceEEc
Q 029150            8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus         8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G---~vdp~~L~~~L~kk~G~~aeiV   74 (198)
                      .++++|+|. |+|.+|+.+|+++|.+++||.++.||+.+++|+|+.   .+++..|+++|+ .+||++.+.
T Consensus         2 t~~~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~-~~Gy~a~l~   71 (72)
T d2aw0a_           2 TQETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE-DMGFDATLS   71 (72)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTSEEEEC
T ss_pred             cEEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHH-hhCCCcEeC
Confidence            467899997 999999999999999999999999999999999984   489999999999 999998764

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=9.8e-14  Score=99.20  Aligned_cols=70  Identities=19%  Similarity=0.279  Sum_probs=63.9

Q ss_pred             cceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---eCCHHHHHHHHHhccCCceEEcCCC
Q 029150            7 LQSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVPAK   77 (198)
Q Consensus         7 ~~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G---~vdp~~L~~~L~kk~G~~aeiV~p~   77 (198)
                      ...++.|+|+ |+|.+|+.+|+++|.+++||.+|.||+.+++|+|+.   .++...|+++|+ .+||++.+....
T Consensus         7 ~~~~v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~-~~Gy~a~~~~~~   80 (84)
T d1q8la_           7 GEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE-AMGFPAFVKKQP   80 (84)
T ss_dssp             SCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEECSCCT
T ss_pred             CCEEEEEEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCHHHHHHHHH-HhCCccEEcCCc
Confidence            4578899997 999999999999999999999999999999999994   488999999999 999999987543

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.43  E-value=1.4e-13  Score=95.25  Aligned_cols=64  Identities=19%  Similarity=0.404  Sum_probs=59.6

Q ss_pred             cceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEe---eeCCHHHHHHHHHhccCCce
Q 029150            7 LQSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVK---GTMDVKELVPYLKEKLKRNV   71 (198)
Q Consensus         7 ~~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~---G~vdp~~L~~~L~kk~G~~a   71 (198)
                      ...+++|+|. |+|.+|+.+|+++|.+++||.+|.||+.+++++|+   +.+++..|+++|+ .+||.+
T Consensus         4 ~~~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~-~~Gy~v   71 (72)
T d1p6ta1           4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHV   71 (72)
T ss_dssp             CCEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHH-HHTCEE
T ss_pred             CceEEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHH-HhCCcc
Confidence            4578999997 99999999999999999999999999999999997   4589999999999 999976

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.41  E-value=3e-13  Score=95.25  Aligned_cols=67  Identities=24%  Similarity=0.399  Sum_probs=61.7

Q ss_pred             eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEee---eCCHHHHHHHHHhccCCceEEcCC
Q 029150            9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKG---TMDVKELVPYLKEKLKRNVEVVPA   76 (198)
Q Consensus         9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G---~vdp~~L~~~L~kk~G~~aeiV~p   76 (198)
                      .+++|.|+ |+|.+|+.+|+++|.+++||.+|.||+.+++|+|+.   .++...|+++|+ .+||++.+...
T Consensus         2 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~   72 (79)
T d1p6ta2           2 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKGE   72 (79)
T ss_dssp             EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCS
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCHHHHHHHHH-HHCCceEECCc
Confidence            57899997 999999999999999999999999999999999984   479999999998 99999988543

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.41  E-value=2.4e-13  Score=94.49  Aligned_cols=65  Identities=15%  Similarity=0.258  Sum_probs=58.9

Q ss_pred             eEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEEeCCCCeEEEeee-CCHHHHHHHHHhccCCceEEc
Q 029150            9 STVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTIDGGKDLVTVKGT-MDVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus         9 ~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~VD~~~~kVtV~G~-vdp~~L~~~L~kk~G~~aeiV   74 (198)
                      ++++|.|. |+|.+|+.+|+++|++++||.+|.||+.+++|+|+.. .....|++.|. .+||++...
T Consensus         3 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~i~~~i~-~~GY~v~~~   69 (73)
T d1mwza_           3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQ-KAGYSLRDE   69 (73)
T ss_dssp             CCEEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHH-HHTCCCCBC
T ss_pred             CEEEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCHHHHHHHHH-HcCCcccCC
Confidence            56899997 9999999999999999999999999999999999965 45789999999 999987653

>d2cu6a1 d.52.8.2 (A:6-96) Hypothetical protein TTHB138 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Fe-S cluster assembly (FSCA) domain-like
family: PaaD-like
domain: Hypothetical protein TTHB138
species: Thermus thermophilus [TaxId: 274]

Probab=88.68  E-value=0.17  Score=34.82  Aligned_cols=36  Identities=17%  Similarity=0.451  Sum_probs=29.3

Q ss_pred             eEEEEEEeecChhH------HHHHHHHHhcCCCccEEEEeCC
Q 029150            9 STVVLKIRLHCEGC------ISKIKKIIYKTKGVDNVTIDGG   44 (198)
Q Consensus         9 ~tvvLkV~MhC~gC------a~kI~kaL~kl~GV~sV~VD~~   44 (198)
                      ..+.+.+.+++.+|      .+.|+.+|.+++||.+|.|.+.
T Consensus        36 ~~v~v~l~lt~~~cp~~~~i~~~i~~al~~l~gv~~V~V~~~   77 (91)
T d2cu6a1          36 PRAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT   77 (91)
T ss_dssp             TEEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred             cccEEEEEcCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEEE
Confidence            45666777777776      6789999999999999998874

>d3bpda1 d.58.61.1 (A:1-91) Uncharacterized protein AF1549 {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: MTH889-like
family: MTH889-like
domain: Uncharacterized protein AF1549
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.91  E-value=1.1  Score=31.28  Aligned_cols=66  Identities=18%  Similarity=0.239  Sum_probs=48.7

Q ss_pred             cceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEE-----eCCCCe--EEEeee-CCHHHHHHHHHhccCCceEEc
Q 029150            7 LQSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTI-----DGGKDL--VTVKGT-MDVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus         7 ~~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~V-----D~~~~k--VtV~G~-vdp~~L~~~L~kk~G~~aeiV   74 (198)
                      ..+.++|-|- -|-+ -.-.+-+.|.+++||..|.+     |..+..  +||.|. +|-+.|.+.|. ++|-.+.++
T Consensus         3 ~irRlVLDVlKPh~p-~~~~~A~~l~~~~gV~~VnitV~EiD~~t~~i~ItiEG~~idyd~i~~~IE-~~Gg~IHSI   77 (91)
T d3bpda1           3 GLRRLVLDVLKPHEP-KTIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIE-DMGGVIHSV   77 (91)
T ss_dssp             SEEEEEEEEEEESCS-CHHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHH-TTTCEEEEE
T ss_pred             ceeEEEEEeecCCCC-CHHHHHHHHhccCCcceEEEEEEEecccceEEEEEEEecCCCHHHHHHHHH-HcCCeEEEE
Confidence            3567888885 4554 44458888999999887764     444443  445676 99999999998 999888766

>d1uwda_ d.52.8.2 (A:) Hypothetical protein TM0487 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Fe-S cluster assembly (FSCA) domain-like
family: PaaD-like
domain: Hypothetical protein TM0487
species: Thermotoga maritima [TaxId: 2336]

Probab=87.71  E-value=0.31  Score=34.26  Aligned_cols=36  Identities=25%  Similarity=0.390  Sum_probs=28.4

Q ss_pred             EEEEEEeecChhH------HHHHHHHHhcCCCccEEEEeCCC
Q 029150           10 TVVLKIRLHCEGC------ISKIKKIIYKTKGVDNVTIDGGK   45 (198)
Q Consensus        10 tvvLkV~MhC~gC------a~kI~kaL~kl~GV~sV~VD~~~   45 (198)
                      .+.+.+.+++.+|      ...|+++|.+++||.+|.|++.-
T Consensus        42 ~V~v~~~lt~~~Cp~~~~i~~~i~~al~~~~gV~~v~V~i~~   83 (102)
T d1uwda_          42 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELTF   83 (102)
T ss_dssp             EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEECC
T ss_pred             ceEEEEecCCCCCchHHHHHHHHHHHHHcCCCCceEEEEEEe
Confidence            5666776666666      56789999999999999998753

>d2raqa1 d.58.61.1 (A:3-95) Uncharacterized protein MTH889 {Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: MTH889-like
family: MTH889-like
domain: Uncharacterized protein MTH889
species: Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=87.38  E-value=0.88  Score=31.79  Aligned_cols=65  Identities=25%  Similarity=0.405  Sum_probs=48.8

Q ss_pred             ceEEEEEEe-ecChhHHHHHHHHHhcCCCccEEEE-----eCCCCeE--EEeee-CCHHHHHHHHHhccCCceEEc
Q 029150            8 QSTVVLKIR-LHCEGCISKIKKIIYKTKGVDNVTI-----DGGKDLV--TVKGT-MDVKELVPYLKEKLKRNVEVV   74 (198)
Q Consensus         8 ~~tvvLkV~-MhC~gCa~kI~kaL~kl~GV~sV~V-----D~~~~kV--tV~G~-vdp~~L~~~L~kk~G~~aeiV   74 (198)
                      .+.++|.|- -|- .-.-.+-+.|.+++||..|.+     |..+..+  ||.|. +|-+.|.+.|. ++|-.+.++
T Consensus         4 iRRlVLDVlKPh~-P~i~e~A~~l~~~~gV~~VnitV~EiD~et~~i~itiEG~~idyd~i~~~IE-~~Gg~IHSI   77 (93)
T d2raqa1           4 LIRIVLDILKPHE-PIIPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIE-SYGGSIHSV   77 (93)
T ss_dssp             EEEEEEEEECCSC-SCHHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHH-HTTCEEEEE
T ss_pred             eEEEEEEeecCCC-CCHHHHHHHHhccCCcceEEEEEEEecccceEEEEEEEecCCCHHHHHHHHH-HcCCeEEEE
Confidence            467788885 344 467788899999999887754     4444444  45676 99999999998 999888765