Citrus Sinensis ID: 029420

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190---
Protein Sequence
MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKAVSQMLYYESLQELQYHLTEFMVWELVQRWKC
Secondary Structure (PSIPRED)
cccEEEEEcccccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHcccccccEEHHHHHHHHHHHHHHHcccccccccccccccHHHHHHcHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcHHHHHHcccccccHHHHHHHccccEEEEEcHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccEEEEEcccEEEccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccHHcccHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcHHHHHHHccccccHHHHHHHHcccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MADLYALdfdgvlcdscgessLSAVKAAKvrwpglfdgvdSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRmpsirkssvsegltvegilenwskikpvimedwSENRDALVDLFGKVRdewmdkdlttwiganrfypgipdalKFASSRIYIVTTKAVSQMLYYESLQELQYHLTEFMVWELVQRWKC
Flexible Loop (DISEMBL)
madlyaldFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSirkssvsegltvegilenwskikPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKAVSQMLYYESLQELQYHLTEFMVWELVQRWKC
Low Complexity Region (SEG)
MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENlllvrlllEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKAVSQMLYYESLQELQYHLTEFMVWELVQRWKC
Disordered region (IsUnstruct)
***LYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKAVSQMLYYESLQELQYHLTEFMVWELVQRW**
Disordered Region (DISOPRED)
MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK*SVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKAVSQMLYYESLQELQYHLTEFMVWELVQRWKC
Disordered Region (DISEMBL)
MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKAVSQMLYYESLQELQYHLTEFMVWELVQRWKC
Disordered Region (DISPRO)
MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRM*********EGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKAVSQMLYYESLQELQYHLTEFMVWELVQRWKC
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKAVSQMLYYESLQELQYHLTEFMVWELVQRWKC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	193
255541628	268	conserved hypothetical protein [Ricinus	0.834	0.600	0.881	4e-75
358249046	268	uncharacterized protein LOC100810003 [Gl	0.834	0.600	0.807	7e-75
224127704	268	predicted protein [Populus trichocarpa]	0.834	0.600	0.875	4e-74
297824659	268	hypothetical protein ARALYDRAFT_904052 [	0.875	0.630	0.813	5e-72
79324923	263	uncharacterized protein [Arabidopsis tha	0.875	0.642	0.813	9e-72
18406942	268	uncharacterized protein [Arabidopsis tha	0.875	0.630	0.813	1e-71
79324925	210	uncharacterized protein [Arabidopsis tha	0.875	0.804	0.813	2e-71
388500274	268	unknown [Lotus japonicus]	0.834	0.600	0.819	6e-71
449441454	268	PREDICTED: uncharacterized protein LOC10	0.834	0.600	0.857	1e-70
388520247	212	unknown [Lotus japonicus]	0.834	0.759	0.819	1e-70

>gi|255541628|ref|XP_002511878.1| conserved hypothetical protein [Ricinus communis] gi|223549058|gb|EEF50547.1| conserved hypothetical protein [Ricinus communis]

 Score =  286 bits (731), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 142/161 (88%), Positives = 154/161 (95%)

Query: 1   MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET 60
           M DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDS +E+WIVDQM I+RPVVET
Sbjct: 1   MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSALEEWIVDQMFIVRPVVET 60

Query: 61  GYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120
           GYENLLLVRLLLE+RMPSIRKSSV+EGLTVEGILENWSK+KPVIME+W E+RD+L+ LFG
Sbjct: 61  GYENLLLVRLLLEMRMPSIRKSSVAEGLTVEGILENWSKLKPVIMEEWGEDRDSLIHLFG 120

Query: 121 KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTK 161
           K+RDEWMDKDL TWI ANRFYPG+PDALKFASSRIYIVTTK
Sbjct: 121 KIRDEWMDKDLATWIAANRFYPGVPDALKFASSRIYIVTTK 161

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249046|ref|NP_001239728.1| uncharacterized protein LOC100810003 [Glycine max] gi|255647823|gb|ACU24371.1| unknown [Glycine max]

 Score =  285 bits (729), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 130/161 (80%), Positives = 148/161 (91%)

Query: 1   MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET 60
           M +LYALDFDGV+CDSCGESSLSA+KAAKVRWPGLFDGVDS  E+WI+DQMH +RPVVET
Sbjct: 1   MGELYALDFDGVICDSCGESSLSALKAAKVRWPGLFDGVDSTTENWIIDQMHTVRPVVET 60

Query: 61  GYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120
           GYEN+LLVRLLLE R P+IRKSSV+EGLTVEGILENWSK+KP+IME+W E RD L+DLFG
Sbjct: 61  GYENVLLVRLLLESRTPTIRKSSVAEGLTVEGILENWSKLKPIIMEEWDEKRDDLIDLFG 120

Query: 121 KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTK 161
           KVRDEW+++D  TWIGANR YPG+ DALKFASSR+YIVTTK
Sbjct: 121 KVRDEWLEQDFATWIGANRLYPGVSDALKFASSRVYIVTTK 161

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127704|ref|XP_002320140.1| predicted protein [Populus trichocarpa] gi|222860913|gb|EEE98455.1| predicted protein [Populus trichocarpa]

 Score =  282 bits (722), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 141/161 (87%), Positives = 154/161 (95%)

Query: 1   MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET 60
           M DLYALDFDGVLCDSCGESSLSAVKAAKVRWP LFD VDS ++DWIVDQMHI+RPVVET
Sbjct: 1   MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPVLFDTVDSTLQDWIVDQMHIVRPVVET 60

Query: 61  GYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120
           GYENLLLVRLLLE+R+PSIRKSSV+EGLTV+GIL+NWSKIKPVIME+W+ENRDAL++LFG
Sbjct: 61  GYENLLLVRLLLEMRIPSIRKSSVAEGLTVDGILDNWSKIKPVIMEEWAENRDALIELFG 120

Query: 121 KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTK 161
           KVRDEWMD DL TWIGANRFYPG+PDALKFASS IYIVTTK
Sbjct: 121 KVRDEWMDNDLATWIGANRFYPGVPDALKFASSSIYIVTTK 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824659|ref|XP_002880212.1| hypothetical protein ARALYDRAFT_904052 [Arabidopsis lyrata subsp. lyrata] gi|297326051|gb|EFH56471.1| hypothetical protein ARALYDRAFT_904052 [Arabidopsis lyrata subsp. lyrata]

 Score =  275 bits (704), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 140/172 (81%), Positives = 159/172 (92%), Gaps = 3/172 (1%)

Query: 1   MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET 60
           M DLYALDFDGVLCDSCGESSLSAVKAAKVRWP LF+GVDS +E+WIVDQMHI+RPVVET
Sbjct: 1   MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHIVRPVVET 60

Query: 61  GYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120
           GYENLLLVRLLLE R+PSIRKSSV+EGLTV+GILE+W+KIKPVIME W E++DAL+DLFG
Sbjct: 61  GYENLLLVRLLLETRIPSIRKSSVAEGLTVDGILESWAKIKPVIMEAWDEDKDALIDLFG 120

Query: 121 KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKAVSQMLYYESL 172
           KVRD+W++KDLTTWIGANRFYPG+ DALKFASS+IYIVTTK   Q  + E+L
Sbjct: 121 KVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTK---QGRFAEAL 169

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79324923|ref|NP_001031546.1| uncharacterized protein [Arabidopsis thaliana] gi|330255535|gb|AEC10629.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  275 bits (702), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 140/172 (81%), Positives = 158/172 (91%), Gaps = 3/172 (1%)

Query: 1   MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET 60
           M DLYALDFDGVLCDSCGESSLSAVKAAKVRWP LF+GVDS +E+WIVDQMHI+RPVVET
Sbjct: 1   MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHIVRPVVET 60

Query: 61  GYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120
           GYENLLLVRLLLE ++PSIRKSSV+EGLTV+GILE+W+K KPVIME W E+RDALVDLFG
Sbjct: 61  GYENLLLVRLLLETKIPSIRKSSVAEGLTVDGILESWAKFKPVIMEAWDEDRDALVDLFG 120

Query: 121 KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKAVSQMLYYESL 172
           KVRD+W++KDLTTWIGANRFYPG+ DALKFASS+IYIVTTK   Q  + E+L
Sbjct: 121 KVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTK---QGRFAEAL 169

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18406942|ref|NP_566060.1| uncharacterized protein [Arabidopsis thaliana] gi|30690184|ref|NP_850443.1| uncharacterized protein [Arabidopsis thaliana] gi|3702346|gb|AAC62903.1| expressed protein [Arabidopsis thaliana] gi|15292713|gb|AAK92725.1| unknown protein [Arabidopsis thaliana] gi|20197209|gb|AAM14973.1| expressed protein [Arabidopsis thaliana] gi|21280859|gb|AAM45106.1| unknown protein [Arabidopsis thaliana] gi|222423162|dbj|BAH19560.1| AT2G45990 [Arabidopsis thaliana] gi|330255533|gb|AEC10627.1| uncharacterized protein [Arabidopsis thaliana] gi|330255534|gb|AEC10628.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  274 bits (701), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 140/172 (81%), Positives = 158/172 (91%), Gaps = 3/172 (1%)

Query: 1   MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET 60
           M DLYALDFDGVLCDSCGESSLSAVKAAKVRWP LF+GVDS +E+WIVDQMHI+RPVVET
Sbjct: 1   MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHIVRPVVET 60

Query: 61  GYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120
           GYENLLLVRLLLE ++PSIRKSSV+EGLTV+GILE+W+K KPVIME W E+RDALVDLFG
Sbjct: 61  GYENLLLVRLLLETKIPSIRKSSVAEGLTVDGILESWAKFKPVIMEAWDEDRDALVDLFG 120

Query: 121 KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKAVSQMLYYESL 172
           KVRD+W++KDLTTWIGANRFYPG+ DALKFASS+IYIVTTK   Q  + E+L
Sbjct: 121 KVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTK---QGRFAEAL 169

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79324925|ref|NP_001031547.1| uncharacterized protein [Arabidopsis thaliana] gi|330255536|gb|AEC10630.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 140/172 (81%), Positives = 158/172 (91%), Gaps = 3/172 (1%)

Query: 1   MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET 60
           M DLYALDFDGVLCDSCGESSLSAVKAAKVRWP LF+GVDS +E+WIVDQMHI+RPVVET
Sbjct: 1   MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHIVRPVVET 60

Query: 61  GYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120
           GYENLLLVRLLLE ++PSIRKSSV+EGLTV+GILE+W+K KPVIME W E+RDALVDLFG
Sbjct: 61  GYENLLLVRLLLETKIPSIRKSSVAEGLTVDGILESWAKFKPVIMEAWDEDRDALVDLFG 120

Query: 121 KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKAVSQMLYYESL 172
           KVRD+W++KDLTTWIGANRFYPG+ DALKFASS+IYIVTTK   Q  + E+L
Sbjct: 121 KVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTK---QGRFAEAL 169

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388500274|gb|AFK38203.1| unknown [Lotus japonicus]

 Score =  272 bits (695), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 132/161 (81%), Positives = 149/161 (92%)

Query: 1   MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET 60
           M +LYALDFDGV+CDSCGESSLSA+KAAKVRWPGLFDGV+S  +DWIVDQMH +RPVVET
Sbjct: 1   MGELYALDFDGVICDSCGESSLSALKAAKVRWPGLFDGVNSATQDWIVDQMHAVRPVVET 60

Query: 61  GYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120
           GYENLLLVRLLLE R PSIRKSSV+EGLTV+GILE WSK+KPVIME+W ENRDAL+DLFG
Sbjct: 61  GYENLLLVRLLLETRAPSIRKSSVAEGLTVDGILEKWSKLKPVIMEEWGENRDALIDLFG 120

Query: 121 KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTK 161
           KVRDEW++++  TWIGANR YPG+ DALKFASSR+YIVTTK
Sbjct: 121 KVRDEWLEQNFATWIGANRIYPGVSDALKFASSRVYIVTTK 161

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441454|ref|XP_004138497.1| PREDICTED: uncharacterized protein LOC101221288 [Cucumis sativus] gi|449529778|ref|XP_004171875.1| PREDICTED: uncharacterized LOC101221288 [Cucumis sativus]

 Score =  271 bits (692), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 138/161 (85%), Positives = 153/161 (95%)

Query: 1   MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET 60
           M DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFD V+S +E+WIVDQM+ +RPVVET
Sbjct: 1   MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDEVESSLENWIVDQMYTVRPVVET 60

Query: 61  GYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120
           GYENLLLVRLLLE+R+PSIRKSSV+EGLTV GILENWSK+KPVIME+W ENRDAL+DLFG
Sbjct: 61  GYENLLLVRLLLEMRLPSIRKSSVAEGLTVHGILENWSKLKPVIMEEWGENRDALIDLFG 120

Query: 121 KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTK 161
           KVRD+W+D+DL TWIGANRFYPG+ DALKFASSRIYIVTTK
Sbjct: 121 KVRDQWIDEDLATWIGANRFYPGVSDALKFASSRIYIVTTK 161

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388520247|gb|AFK48185.1| unknown [Lotus japonicus]

 Score =  271 bits (692), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 132/161 (81%), Positives = 149/161 (92%)

Query: 1   MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET 60
           M +LYALDFDGV+CDSCGESSLSA+KAAKVRWPGLFDGV+S  +DWIVDQMH +RPVVET
Sbjct: 1   MGELYALDFDGVICDSCGESSLSALKAAKVRWPGLFDGVNSATQDWIVDQMHAVRPVVET 60

Query: 61  GYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120
           GYENLLLVRLLLE R PSIRKSSV+EGLTV+GILE WSK+KPVIME+W ENRDAL+DLFG
Sbjct: 61  GYENLLLVRLLLETRAPSIRKSSVAEGLTVDGILEKWSKLKPVIMEEWGENRDALIDLFG 120

Query: 121 KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTK 161
           KVRDEW++++  TWIGANR YPG+ DALKFASSR+YIVTTK
Sbjct: 121 KVRDEWLEQNFATWIGANRIYPGVSDALKFASSRVYIVTTK 161

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	193
TAIR|locus:2050730	268	AT2G45990 "AT2G45990" [Arabido	0.834	0.600	0.801	6.3e-69

TAIR|locus:2050730 AT2G45990 "AT2G45990" [Arabidopsis thaliana (taxid:3702)]

 Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
 Identities = 129/161 (80%), Positives = 145/161 (90%)

Query:     1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET 60
             M DLYALDFDGVLCDSCGESSLSAVKAAKVRWP LF+GVDS +E+WIVDQMHI+RPVVET
Sbjct:     1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHIVRPVVET 60

Query:    61 GYENXXXXXXXXEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120
             GYEN        E ++PSIRKSSV+EGLTV+GILE+W+K KPVIME W E+RDALVDLFG
Sbjct:    61 GYENLLLVRLLLETKIPSIRKSSVAEGLTVDGILESWAKFKPVIMEAWDEDRDALVDLFG 120

Query:   121 KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTK 161
             KVRD+W++KDLTTWIGANRFYPG+ DALKFASS+IYIVTTK
Sbjct:   121 KVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTK 161


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.136   0.428    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      193       185   0.00080  110 3  11 22  0.43    32
                                                     31  0.41    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  621 (66 KB)
  Total size of DFA:  188 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.68u 0.20s 15.88t   Elapsed:  00:00:01
  Total cpu time:  15.68u 0.20s 15.88t   Elapsed:  00:00:01
  Start:  Mon May 20 22:39:49 2013   End:  Mon May 20 22:39:50 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	193
COG0546	220	Gph Predicted phosphatases [General function predi	99.83
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.7
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.65
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.64
PRK13288	214	pyrophosphatase PpaX; Provisional	99.63
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.63
PRK11587	218	putative phosphatase; Provisional	99.62
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.6
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.6
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.59
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.59
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.57
PLN02575	381	haloacid dehalogenase-like hydrolase	99.55
PRK11590	211	hypothetical protein; Provisional	99.55
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.55
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.52
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.51
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.51
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.5
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.49
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.48
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.44
PLN02940	382	riboflavin kinase	99.43
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.42
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.39
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.38
PHA02597	197	30.2 hypothetical protein; Provisional	99.36
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.33
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.33
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.33
PRK09449	224	dUMP phosphatase; Provisional	99.3
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.29
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.22
PLN02954	224	phosphoserine phosphatase	99.19
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.17
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.16
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.14
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.13
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.11
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	99.1
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.06
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.05
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.04
PRK13582	205	thrH phosphoserine phosphatase; Provisional	98.96
PRK14988	224	GMP/IMP nucleotidase; Provisional	98.96
PLN02811	220	hydrolase	98.95
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	98.93
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	98.91
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	98.65
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	98.64
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	98.6
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	98.59
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	98.58
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	98.46
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	98.43
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	98.41
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	98.34
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	98.32
PRK11133	322	serB phosphoserine phosphatase; Provisional	98.27
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	98.19
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	98.08
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	98.0
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	97.87
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	97.84
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	97.72
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	97.62
PRK08238	479	hypothetical protein; Validated	97.56
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	97.5
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	97.44
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	97.39
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	97.33
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	97.19
PRK01158	230	phosphoglycolate phosphatase; Provisional	96.89
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	96.83
PRK10976	266	putative hydrolase; Provisional	96.8
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	96.65
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	96.63
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	96.59
PTZ00174	247	phosphomannomutase; Provisional	96.52
PRK10513	270	sugar phosphate phosphatase; Provisional	96.49
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	96.49
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	96.44
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	96.43
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.41
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	96.34
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	96.32
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	96.3
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	96.28
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	96.21
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	96.12
PLN02423	245	phosphomannomutase	95.94
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	95.86
PLN02177	497	glycerol-3-phosphate acyltransferase	95.58
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	95.44
PLN02887	580	hydrolase family protein	95.44
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	95.43
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	95.42
PRK06769	173	hypothetical protein; Validated	95.35
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	95.32
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	95.31
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	95.28
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	95.1
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	95.03
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	95.03
PHA02530	300	pseT polynucleotide kinase; Provisional	94.82
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	94.74
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	94.5
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	94.18
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	94.17
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	94.17
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	94.13
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	94.06
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	94.05
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	93.89
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	93.87
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	93.76
COG4359	220	Uncharacterized conserved protein [Function unknow	93.7
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	93.62
PHA03398	303	viral phosphatase superfamily protein; Provisional	93.59
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	93.48
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	93.47
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	93.43
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	93.43
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	93.4
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	93.29
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	93.21
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	93.2
PRK10444	248	UMP phosphatase; Provisional	92.99
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	92.92
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	92.73
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	92.66
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	92.39
PHA03398	303	viral phosphatase superfamily protein; Provisional	92.25
PLN02645	311	phosphoglycolate phosphatase	92.2
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	92.03
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	91.87
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	91.77
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	91.61
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	91.54
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	91.43
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	91.31
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	91.07
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	91.04
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	90.9
PLN02499	498	glycerol-3-phosphate acyltransferase	90.73
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	90.24
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	90.09
COG0241	181	HisB Histidinol phosphatase and related phosphatas	89.91
PLN02645	311	phosphoglycolate phosphatase	89.64
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	89.62
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	89.55
COG4229	229	Predicted enolase-phosphatase [Energy production a	89.32
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	89.06
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	88.71
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	88.67
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	87.16
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	86.87
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	86.79
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	86.75
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	86.69
PLN03017	366	trehalose-phosphatase	86.48
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	86.25
PLN02151	354	trehalose-phosphatase	85.97
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	85.71
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	85.0
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	84.91
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	83.66
PF02358	235	Trehalose_PPase: Trehalose-phosphatase; InterPro:	83.04
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	82.84
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	82.23
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	81.7
COG4996	164	Predicted phosphatase [General function prediction	81.6
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	81.42
PLN02580	384	trehalose-phosphatase	81.02

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.83  E-value=7.6e-20  Score=151.38  Aligned_cols=119  Identities=25%  Similarity=0.384  Sum_probs=95.8

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.++|+|||||||+||.+.+..+++.+++++      |++..       ....++.+||.|.+.++ .+.+...      
T Consensus         3 ~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~------~~~~~-------~~~~~~~~ig~~~~~~~-~~~~~~~------   62 (220)
T COG0546           3 MIKAILFDLDGTLVDSAEDILRAFNAALAEL------GLPPL-------DEEEIRQLIGLGLDELI-ERLLGEA------   62 (220)
T ss_pred             CCCEEEEeCCCccccChHHHHHHHHHHHHHc------CCCCC-------CHHHHHHHhcCCHHHHH-HHHhccc------
Confidence            4589999999999999999999999999999      56644       25889999999999887 3554221      


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                              .                      .+...+..+.|+++|.+.|.+..  .+++||||.++|+   ++|++++|
T Consensus        63 --------~----------------------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gv~e~L~~L~~~g~~l~i  110 (220)
T COG0546          63 --------D----------------------EEAAAELVERLREEFLTAYAELL--ESRLFPGVKELLAALKSAGYKLGI  110 (220)
T ss_pred             --------c----------------------chhHHHHHHHHHHHHHHHHHhhc--cCccCCCHHHHHHHHHhCCCeEEE
Confidence                    0                      00011456677778877777665  5799999999999   99999999


Q ss_pred             EcCcH--HHHHHHHHH
Q 029420          158 VTTKA--VSQMLYYES  171 (193)
Q Consensus       158 vTnK~--~a~~lL~~~  171 (193)
                      +|||+  .++.+|+++
T Consensus       111 ~T~k~~~~~~~~l~~~  126 (220)
T COG0546         111 VTNKPERELDILLKAL  126 (220)
T ss_pred             EeCCcHHHHHHHHHHh
Confidence            99999  999999986

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.70  E-value=1.5e-16  Score=132.12  Aligned_cols=117  Identities=21%  Similarity=0.269  Sum_probs=86.9

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.++|+|||||||+||.+.+..+.+.+++++      |.+..+       .+.++..+|.|.+.++. ..+..       
T Consensus        11 ~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~~-~~~~~-------   69 (229)
T PRK13226         11 FPRAVLFDLDGTLLDSAPDMLATVNAMLAAR------GRAPIT-------LAQLRPVVSKGARAMLA-VAFPE-------   69 (229)
T ss_pred             cCCEEEEcCcCccccCHHHHHHHHHHHHHHC------CCCCCC-------HHHHHHHhhhHHHHHHH-HHhcc-------
Confidence            7799999999999999999999999999999      666442       46788889988777652 22110       


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                                                   .+.+..++....+++.|.+.+    ....++|||+.++|+   ++|++++|
T Consensus        70 -----------------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~pg~~~~L~~L~~~g~~l~i  116 (229)
T PRK13226         70 -----------------------------LDAAARDALIPEFLQRYEALI----GTQSQLFDGVEGMLQRLECAGCVWGI  116 (229)
T ss_pred             -----------------------------CChHHHHHHHHHHHHHHHHhh----hhcCeeCCCHHHHHHHHHHCCCeEEE
Confidence                                         111222334455566655432    234689999999999   88999999


Q ss_pred             EcCcH--HHHHHHHHH
Q 029420          158 VTTKA--VSQMLYYES  171 (193)
Q Consensus       158 vTnK~--~a~~lL~~~  171 (193)
                      +||++  .+..+++++
T Consensus       117 ~Tn~~~~~~~~~l~~~  132 (229)
T PRK13226        117 VTNKPEYLARLILPQL  132 (229)
T ss_pred             ECCCCHHHHHHHHHHc
Confidence            99998  777788877

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.65  E-value=2.1e-15  Score=123.56  Aligned_cols=120  Identities=14%  Similarity=0.130  Sum_probs=85.4

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK   81 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~   81 (193)
                      .++|+|||||||+||.+.+..+.+.+++++      |.+..+       .+..+.++|.+...++ .+.+..        
T Consensus         1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~-~~~~~~--------   58 (220)
T TIGR03351         1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAA------GLSPTP-------EEVQSAWMGQSKIEAI-RALLAL--------   58 (220)
T ss_pred             CcEEEEecCCCeeccCchHHHHHHHHHHHc------CCCCCH-------HHHHHhhcCCCHHHHH-HHHHhc--------
Confidence            478999999999999999999999999998      565331       1222337787766655 222211        


Q ss_pred             ccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEE
Q 029420           82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIV  158 (193)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVv  158 (193)
                                                .|.+.+..++.+..|++.|.+.|..   ...++|||+.++|+   ++|++++|+
T Consensus        59 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~G~~~~L~~L~~~g~~~~iv  109 (220)
T TIGR03351        59 --------------------------DGADEAEAQAAFADFEERLAEAYDD---GPPVALPGAEEAFRSLRSSGIKVALT  109 (220)
T ss_pred             --------------------------cCCCHHHHHHHHHHHHHHHHHHhcc---cCCccCCCHHHHHHHHHHCCCEEEEE
Confidence                                      1233334445556666666554432   24589999999999   789999999


Q ss_pred             cCcH--HHHHHHHHHh
Q 029420          159 TTKA--VSQMLYYESL  172 (193)
Q Consensus       159 TnK~--~a~~lL~~~~  172 (193)
                      ||++  .++.+|+++.
T Consensus       110 T~~~~~~~~~~l~~~~  125 (220)
T TIGR03351       110 TGFDRDTAERLLEKLG  125 (220)
T ss_pred             eCCchHHHHHHHHHhh
Confidence            9999  8888888774

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.64  E-value=2.1e-15  Score=129.36  Aligned_cols=113  Identities=19%  Similarity=0.191  Sum_probs=81.9

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK   81 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~   81 (193)
                      .++|+|||||||+||.+.+..+.+.+++++      |++..+       .+.++.++|...+.++  +            
T Consensus        62 ~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~------G~~~~~-------~~~~~~~~g~~~~~i~--~------------  114 (273)
T PRK13225         62 LQAIIFDFDGTLVDSLPTVVAIANAHAPDF------GYDPID-------ERDYAQLRQWSSRTIV--R------------  114 (273)
T ss_pred             cCEEEECCcCccccCHHHHHHHHHHHHHHC------CCCCCC-------HHHHHHHhCccHHHHH--H------------
Confidence            478999999999999999999999999999      565332       2445666665544333  1            


Q ss_pred             ccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEE
Q 029420           82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIV  158 (193)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVv  158 (193)
                                               .++.++++.++....|+++|.+.     ....++||||.++|+   ++|++++|+
T Consensus       115 -------------------------~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~pg~~e~L~~L~~~gi~laIv  164 (273)
T PRK13225        115 -------------------------RAGLSPWQQARLLQRVQRQLGDC-----LPALQLFPGVADLLAQLRSRSLCLGIL  164 (273)
T ss_pred             -------------------------HcCCCHHHHHHHHHHHHHHHHhh-----cccCCcCCCHHHHHHHHHHCCCeEEEE
Confidence                                     11223333344455566555332     345789999999999   899999999


Q ss_pred             cCcH--HHHHHHHHH
Q 029420          159 TTKA--VSQMLYYES  171 (193)
Q Consensus       159 TnK~--~a~~lL~~~  171 (193)
                      ||+.  .++.+|+++
T Consensus       165 Sn~~~~~~~~~L~~~  179 (273)
T PRK13225        165 SSNSRQNIEAFLQRQ  179 (273)
T ss_pred             eCCCHHHHHHHHHHc
Confidence            9999  888899887

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.63  E-value=2.8e-15  Score=122.55  Aligned_cols=113  Identities=15%  Similarity=0.134  Sum_probs=79.3

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.++|+|||||||+||.+.+..+.+.++++++      .+..+       .++++...|......+.  .+         
T Consensus         2 ~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~------~~~~~-------~~~~~~~~G~~~~~~~~--~~---------   57 (214)
T PRK13288          2 KINTVLFDLDGTLINTNELIISSFLHTLKTYY------PNQYK-------REDVLPFIGPSLHDTFS--KI---------   57 (214)
T ss_pred             CccEEEEeCCCcCccCHHHHHHHHHHHHHHhC------CCCCC-------HHHHHHHhCcCHHHHHH--hc---------
Confidence            46899999999999999999999999999993      33222       24566666765443331  01         


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                                                    +++..++....|++.+.+.    .....++|||+.++|+   ++|++++|
T Consensus        58 ------------------------------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~l~~L~~~g~~~~i  103 (214)
T PRK13288         58 ------------------------------DESKVEEMITTYREFNHEH----HDELVTEYETVYETLKTLKKQGYKLGI  103 (214)
T ss_pred             ------------------------------CHHHHHHHHHHHHHHHHHh----hhhhcccCcCHHHHHHHHHHCCCeEEE
Confidence                                          1122223334455544332    2345689999999999   78999999


Q ss_pred             EcCcH--HHHHHHHHH
Q 029420          158 VTTKA--VSQMLYYES  171 (193)
Q Consensus       158 vTnK~--~a~~lL~~~  171 (193)
                      +||++  .+..+|+.+
T Consensus       104 ~S~~~~~~~~~~l~~~  119 (214)
T PRK13288        104 VTTKMRDTVEMGLKLT  119 (214)
T ss_pred             EeCCCHHHHHHHHHHc
Confidence            99998  788888877

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.63  E-value=3.8e-15  Score=127.27  Aligned_cols=122  Identities=20%  Similarity=0.262  Sum_probs=88.1

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.++|+|||||||+||.+.+..+.+.+++++      |.+..       +.++++.++|.|...++ ...+...      
T Consensus        12 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~------g~~~~-------~~~~~~~~~g~~~~~~~-~~~l~~~------   71 (272)
T PRK13223         12 LPRLVMFDLDGTLVDSVPDLAAAVDRMLLEL------GRPPA-------GLEAVRHWVGNGAPVLV-RRALAGS------   71 (272)
T ss_pred             cCCEEEEcCCCccccCHHHHHHHHHHHHHHc------CCCCC-------CHHHHHHHhChhHHHHH-HHHhccc------
Confidence            6789999999999999999999999999999      55532       23567889999876665 2332110      


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                                              ...++.+++..++....|++.|...     .....+|||+.++|+   ++|++++|
T Consensus        72 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~~e~L~~Lk~~g~~l~i  122 (272)
T PRK13223         72 ------------------------IDHDGVDDELAEQALALFMEAYADS-----HELTVVYPGVRDTLKWLKKQGVEMAL  122 (272)
T ss_pred             ------------------------ccccCCCHHHHHHHHHHHHHHHHhc-----CcCCccCCCHHHHHHHHHHCCCeEEE
Confidence                                    0012334444455556666655432     234689999999999   78999999


Q ss_pred             EcCcH--HHHHHHHHH
Q 029420          158 VTTKA--VSQMLYYES  171 (193)
Q Consensus       158 vTnK~--~a~~lL~~~  171 (193)
                      +||++  .++.+++++
T Consensus       123 vTn~~~~~~~~~l~~~  138 (272)
T PRK13223        123 ITNKPERFVAPLLDQM  138 (272)
T ss_pred             EECCcHHHHHHHHHHc
Confidence            99998  788888775

>PRK11587 putative phosphatase; Provisional

Probab=99.62  E-value=5.3e-15  Score=121.70  Aligned_cols=114  Identities=17%  Similarity=0.134  Sum_probs=74.9

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.++|+|||||||+||.+.+..+.+.+++++      |++..         +..+.++|.+....+ .+.+.        
T Consensus         2 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~------g~~~~---------~~~~~~~g~~~~~~~-~~~~~--------   57 (218)
T PRK11587          2 RCKGFLFDLDGTLVDSLPAVERAWSNWADRH------GIAPD---------EVLNFIHGKQAITSL-RHFMA--------   57 (218)
T ss_pred             CCCEEEEcCCCCcCcCHHHHHHHHHHHHHHc------CCCHH---------HHHHHHcCCCHHHHH-HHHhc--------
Confidence            4589999999999999999999999999999      56521         223344576655554 12211        


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                            +                      .+.+.+.+.+..++ .|...    .....++|||+.++|+   ++|++++|
T Consensus        58 ------~----------------------~~~~~~~~~~~~~~-~~~~~----~~~~~~~~pg~~e~L~~L~~~g~~~~i  104 (218)
T PRK11587         58 ------G----------------------ASEAEIQAEFTRLE-QIEAT----DTEGITALPGAIALLNHLNKLGIPWAI  104 (218)
T ss_pred             ------c----------------------CCcHHHHHHHHHHH-HHHHh----hhcCceeCcCHHHHHHHHHHcCCcEEE
Confidence                  0                      11122222222211 12111    2345789999999999   89999999


Q ss_pred             EcCcH--HHHHHHHHH
Q 029420          158 VTTKA--VSQMLYYES  171 (193)
Q Consensus       158 vTnK~--~a~~lL~~~  171 (193)
                      +||++  .+...++..
T Consensus       105 vTn~~~~~~~~~l~~~  120 (218)
T PRK11587        105 VTSGSVPVASARHKAA  120 (218)
T ss_pred             EcCCCchHHHHHHHhc
Confidence            99998  666666655

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.60  E-value=1e-14  Score=124.26  Aligned_cols=117  Identities=15%  Similarity=0.082  Sum_probs=80.4

Q ss_pred             CceEEEecCcccccChHHHH-HHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            2 ADLYALDFDGVLCDSCGESS-LSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~-~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      .++|+|||||||+||.+.+. .+.+.+++++      |++..+       .+.++.++|.+....+ ...+..       
T Consensus        24 ~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~------G~~~~~-------~e~~~~~~G~~~~~~~-~~l~~~-------   82 (260)
T PLN03243         24 WLGVVLEWEGVIVEDDSELERKAWRALAEEE------GKRPPP-------AFLLKRAEGMKNEQAI-SEVLCW-------   82 (260)
T ss_pred             ceEEEEeCCCceeCCchHHHHHHHHHHHHHc------CCCCCH-------HHHHHHhcCCCHHHHH-HHHhcc-------
Confidence            37899999999999988776 4778999999      565321       2456788998877665 233211       


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                                                  ..+.+.+.+....++..|... .   ....++|||+.++|+   ++|++++|
T Consensus        83 ----------------------------~~~~~~~~~l~~~~~~~~~~~-~---~~~~~l~pg~~e~L~~L~~~g~~l~I  130 (260)
T PLN03243         83 ----------------------------SRDFLQMKRLAIRKEDLYEYM-Q---GGLYRLRPGSREFVQALKKHEIPIAV  130 (260)
T ss_pred             ----------------------------CCCHHHHHHHHHHHHHHHHHH-H---ccCcccCCCHHHHHHHHHHCCCEEEE
Confidence                                        011122223333344444221 1   124689999999999   79999999


Q ss_pred             EcCcH--HHHHHHHHH
Q 029420          158 VTTKA--VSQMLYYES  171 (193)
Q Consensus       158 vTnK~--~a~~lL~~~  171 (193)
                      +||++  .++.+++++
T Consensus       131 ~Tn~~~~~~~~~l~~~  146 (260)
T PLN03243        131 ASTRPRRYLERAIEAV  146 (260)
T ss_pred             EeCcCHHHHHHHHHHc
Confidence            99998  888899887

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.60  E-value=6e-15  Score=119.77  Aligned_cols=117  Identities=19%  Similarity=0.235  Sum_probs=82.2

Q ss_pred             EEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccccccc
Q 029420            5 YALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKSSV   84 (193)
Q Consensus         5 vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~~~~   84 (193)
                      |+|||||||+||.+.+..+.+.+++++      |.+..+       .+.++.++|.+....+ .+.+...          
T Consensus         1 viFD~DGTL~Ds~~~~~~~~~~~~~~~------~~~~~~-------~~~~~~~~g~~~~~~~-~~~~~~~----------   56 (213)
T TIGR01449         1 VLFDLDGTLVDSAPDIAAAVNMALAAL------GLPPAT-------LARVIGFIGNGVPVLM-ERVLAWA----------   56 (213)
T ss_pred             CeecCCCccccCHHHHHHHHHHHHHHC------CCCCCC-------HHHHHHHhcccHHHHH-HHHhhcc----------
Confidence            689999999999999999999999999      555432       3556777888766554 2222110          


Q ss_pred             cccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEEcCc
Q 029420           85 SEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTK  161 (193)
Q Consensus        85 ~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVvTnK  161 (193)
                        +.                    +.+.+..++....+.++|.+.    .....++|||+.++|+   ++|++++|+||+
T Consensus        57 --~~--------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~  110 (213)
T TIGR01449        57 --GQ--------------------EPDAQRVAELRKLFDRHYEEV----AGELTSVFPGVEATLGALRAKGLRLGLVTNK  110 (213)
T ss_pred             --cc--------------------ccChHHHHHHHHHHHHHHHHh----ccccCccCCCHHHHHHHHHHCCCeEEEEeCC
Confidence              00                    112233334445555555443    3345689999999999   889999999999


Q ss_pred             H--HHHHHHHHH
Q 029420          162 A--VSQMLYYES  171 (193)
Q Consensus       162 ~--~a~~lL~~~  171 (193)
                      +  .++.+++++
T Consensus       111 ~~~~~~~~l~~~  122 (213)
T TIGR01449       111 PTPLARPLLELL  122 (213)
T ss_pred             CHHHHHHHHHHc
Confidence            8  888888886

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.59  E-value=1.1e-14  Score=122.56  Aligned_cols=120  Identities=13%  Similarity=0.082  Sum_probs=79.6

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.++|+|||||||+||.+.+..+.+.+++++|..  .|.+..       .....+.++|.+.+.++ .+.+..       
T Consensus        21 ~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~--~g~~~~-------~~~~~~~~~G~~~~~~~-~~~~~~-------   83 (248)
T PLN02770         21 PLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFN--GGVPIT-------EEFFVENIAGKHNEDIA-LGLFPD-------   83 (248)
T ss_pred             ccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccc--cCCCCC-------HHHHHHHcCCCCHHHHH-HHHcCc-------
Confidence            3578999999999999999999999999999311  012211       11234667787766655 222210       


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                              ..                      +...+....++.+|.+.+    .....+||||.++|+   ++|++++|
T Consensus        84 --------~~----------------------~~~~~~~~~~~~~y~~~~----~~~~~l~pgv~e~L~~L~~~g~~l~I  129 (248)
T PLN02770         84 --------DL----------------------ERGLKFTDDKEALFRKLA----SEQLKPLNGLYKLKKWIEDRGLKRAA  129 (248)
T ss_pred             --------ch----------------------hhHHHHHHHHHHHHHHHH----HhcCCcCccHHHHHHHHHHcCCeEEE
Confidence                    00                      001112233444444332    234689999999999   89999999


Q ss_pred             EcCcH--HHHHHHHHH
Q 029420          158 VTTKA--VSQMLYYES  171 (193)
Q Consensus       158 vTnK~--~a~~lL~~~  171 (193)
                      +||++  .++.+|+++
T Consensus       130 ~Tn~~~~~~~~~l~~~  145 (248)
T PLN02770        130 VTNAPRENAELMISLL  145 (248)
T ss_pred             EeCCCHHHHHHHHHHc
Confidence            99998  888888887

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.59  E-value=1.8e-14  Score=122.22  Aligned_cols=127  Identities=13%  Similarity=0.085  Sum_probs=83.3

Q ss_pred             CceEEEecCcccccChHH-HHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            2 ADLYALDFDGVLCDSCGE-SSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~d-i~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      .++|+|||||||+||... ...+.+.+++++      |++..        .++++..+|.+....+. ..+..       
T Consensus         4 ~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~------g~~~~--------~~~~~~~~G~~~~~~~~-~~~~~-------   61 (267)
T PRK13478          4 IQAVIFDWAGTTVDFGSFAPTQAFVEAFAQF------GVEIT--------LEEARGPMGLGKWDHIR-ALLKM-------   61 (267)
T ss_pred             eEEEEEcCCCCeecCCCccHHHHHHHHHHHc------CCCCC--------HHHHHHhcCCCHHHHHH-HHHhc-------
Confidence            489999999999999654 367889999998      55422        24567778877555441 21100       


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCC--CHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSE--NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRI  155 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~--~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~l  155 (193)
                                ....       ..+...+|.  +.+++.+....|+++|.+.+    .....+|||+.++|+   ++|+++
T Consensus        62 ----------~~~~-------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~pg~~elL~~L~~~g~~l  120 (267)
T PRK13478         62 ----------PRVA-------ARWQAVFGRLPTEADVDALYAAFEPLQIAKL----ADYATPIPGVLEVIAALRARGIKI  120 (267)
T ss_pred             ----------HHHH-------HHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH----hhcCCCCCCHHHHHHHHHHCCCEE
Confidence                      0000       111122232  34445555666666655443    335689999999999   889999


Q ss_pred             EEEcCcH--HHHHHHHHH
Q 029420          156 YIVTTKA--VSQMLYYES  171 (193)
Q Consensus       156 aVvTnK~--~a~~lL~~~  171 (193)
                      +|+||++  .+..+|+.+
T Consensus       121 ~I~T~~~~~~~~~~l~~~  138 (267)
T PRK13478        121 GSTTGYTREMMDVVVPLA  138 (267)
T ss_pred             EEEcCCcHHHHHHHHHHH
Confidence            9999999  777888765

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.57  E-value=3.4e-14  Score=119.25  Aligned_cols=127  Identities=14%  Similarity=0.123  Sum_probs=85.0

Q ss_pred             CceEEEecCcccccChH-HHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            2 ADLYALDFDGVLCDSCG-ESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~-di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      .++|+|||||||+||.. ....+.+.+++++      |.+. +       .++++..+|.+....+. ..+..       
T Consensus         2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~------g~~~-~-------~~~~~~~~G~~~~~~~~-~~~~~-------   59 (253)
T TIGR01422         2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEF------GVQI-T-------LEEARGPMGLGKWDHIR-ALLKM-------   59 (253)
T ss_pred             ceEEEEeCCCCeecCCCccHHHHHHHHHHHc------CCCc-c-------HHHHHHhcCccHHHHHH-HHhcC-------
Confidence            37899999999999964 3477889999998      5542 1       34567778877665552 22100       


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcC--CCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWS--ENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRI  155 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g--~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~l  155 (193)
                                .....       .+.+.+|  .+.+.+.+....|+++|.+.+    ....++||||.++|+   ++|+++
T Consensus        60 ----------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~pg~~e~L~~L~~~g~~l  118 (253)
T TIGR01422        60 ----------PAVAE-------RWRAKFGRLPTEADIEAIYEAFEPLQLAKL----AEYSSPIPGVIEVIAYLRARGIKI  118 (253)
T ss_pred             ----------HHHHH-------HHHHHhCCCCCHHHHHHHHHHHHHHHHHHH----HhcCccCCCHHHHHHHHHHCCCeE
Confidence                      00111       1112223  244555556666666654432    335789999999999   889999


Q ss_pred             EEEcCcH--HHHHHHHHH
Q 029420          156 YIVTTKA--VSQMLYYES  171 (193)
Q Consensus       156 aVvTnK~--~a~~lL~~~  171 (193)
                      +|+||++  .++.+|+++
T Consensus       119 ~IvT~~~~~~~~~~l~~~  136 (253)
T TIGR01422       119 GSTTGYTREMMDVVAPEA  136 (253)
T ss_pred             EEECCCcHHHHHHHHHHH
Confidence            9999999  888888877

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.55  E-value=4.5e-14  Score=126.23  Aligned_cols=117  Identities=15%  Similarity=0.095  Sum_probs=81.9

Q ss_pred             ceEEEecCcccccChHHHHH-HHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccc
Q 029420            3 DLYALDFDGVLCDSCGESSL-SAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK   81 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~di~~-a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~   81 (193)
                      ++|+|||||||+||.+.+.. +.+.+++++      |++..+       .+.++.++|.+.+..+ .+.+..        
T Consensus       132 ~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~------G~~~~~-------~e~~~~~~G~~~~~~l-~~ll~~--------  189 (381)
T PLN02575        132 LGAIFEWEGVIIEDNPDLENQAWLTLAQEE------GKSPPP-------AFILRRVEGMKNEQAI-SEVLCW--------  189 (381)
T ss_pred             CEEEEcCcCcceeCHHHHHHHHHHHHHHHc------CCCCCH-------HHHHHHhcCCCHHHHH-HHHhhc--------
Confidence            68999999999999998886 555566788      565432       3457888998877665 232210        


Q ss_pred             ccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEE
Q 029420           82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIV  158 (193)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVv  158 (193)
                                                 ..++++.++....+++.|.+.    ......+|||+.++|+   ++|++++|+
T Consensus       190 ---------------------------~~~~~~~e~l~~~~~~~y~~~----~~~~~~l~pGa~ElL~~Lk~~GiklaIa  238 (381)
T PLN02575        190 ---------------------------SRDPAELRRMATRKEEIYQAL----QGGIYRLRTGSQEFVNVLMNYKIPMALV  238 (381)
T ss_pred             ---------------------------cCCHHHHHHHHHHHHHHHHHH----hccCCCcCcCHHHHHHHHHHCCCeEEEE
Confidence                                       011222334444555555443    2334689999999999   899999999


Q ss_pred             cCcH--HHHHHHHHHh
Q 029420          159 TTKA--VSQMLYYESL  172 (193)
Q Consensus       159 TnK~--~a~~lL~~~~  172 (193)
                      ||++  .++.+|++++
T Consensus       239 Sn~~~~~~~~~L~~lg  254 (381)
T PLN02575        239 STRPRKTLENAIGSIG  254 (381)
T ss_pred             eCCCHHHHHHHHHHcC
Confidence            9999  8888998873

>PRK11590 hypothetical protein; Provisional

Probab=99.55  E-value=2.5e-14  Score=117.63  Aligned_cols=121  Identities=14%  Similarity=0.171  Sum_probs=84.9

Q ss_pred             ceEEEecCcccccChHHHHHHHHHHH-HHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccc
Q 029420            3 DLYALDFDGVLCDSCGESSLSAVKAA-KVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK   81 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~di~~a~~~al-~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~   81 (193)
                      |+++|||||||+  .+++..+.+..+ +++      |++..       ....+++++|.|....+....+.         
T Consensus         7 k~~iFD~DGTL~--~~d~~~~~~~~~~~~~------g~~~~-------~~~~~~~~ig~~l~~~~~~~~~~---------   62 (211)
T PRK11590          7 RVVFFDLDGTLH--QQDMFGSFLRYLLRRQ------PLNLL-------LVLPLLPVIGLGLLVKGRAARWP---------   62 (211)
T ss_pred             eEEEEecCCCCc--ccchHHHHHHHHHHhc------chhhH-------HHhHHHHHhccCcccchhhhhhh---------
Confidence            689999999999  677899999888 777      55533       24678899998865543110110         


Q ss_pred             ccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHH-H---hCCCcEEE
Q 029420           82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL-K---FASSRIYI  157 (193)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L-~---~~gi~laV  157 (193)
                              ...+.       .  ....|++.+++++..+.|+++|.+.        ..+||||.++| +   ++|++++|
T Consensus        63 --------~~~~~-------~--~~~~g~~~~~~~~~~~~f~~~~~~~--------~~~~pga~e~L~~~l~~~G~~l~I  117 (211)
T PRK11590         63 --------MSLLL-------W--GCTFGHSEARLQALEADFVRWFRDN--------VTAFPVVQERLTTYLLSSDADVWL  117 (211)
T ss_pred             --------HHHHH-------H--HHHcCCCHHHHHHHHHHHHHHHHHh--------CcCCccHHHHHHHHHHhCCCEEEE
Confidence                    00000       0  0012567777777788888776532        57799999999 4   57999999


Q ss_pred             EcCcH--HHHHHHHHHh
Q 029420          158 VTTKA--VSQMLYYESL  172 (193)
Q Consensus       158 vTnK~--~a~~lL~~~~  172 (193)
                      ||||+  .++++++++.
T Consensus       118 vSas~~~~~~~il~~l~  134 (211)
T PRK11590        118 ITGSPQPLVEQVYFDTP  134 (211)
T ss_pred             EeCCcHHHHHHHHHHcc
Confidence            99999  8888988865

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.55  E-value=9.3e-14  Score=113.59  Aligned_cols=120  Identities=24%  Similarity=0.305  Sum_probs=86.9

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK   81 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~   81 (193)
                      .++|+|||||||+||.+....+.+.+++++      |.+..+       .+.++.++|.|...++ .+.+...       
T Consensus         6 ~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~------~~~~~~-------~~~~~~~~g~~~~~~~-~~~~~~~-------   64 (226)
T PRK13222          6 IRAVAFDLDGTLVDSAPDLAAAVNAALAAL------GLPPAG-------EERVRTWVGNGADVLV-ERALTWA-------   64 (226)
T ss_pred             CcEEEEcCCcccccCHHHHHHHHHHHHHHC------CCCCCC-------HHHHHHHhCccHHHHH-HHHHhhc-------
Confidence            489999999999999999999999999999      555432       3567788998877766 3443210       


Q ss_pred             ccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEE
Q 029420           82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIV  158 (193)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVv  158 (193)
                           +                    ...+.++.++....+.++|.+.    .....++|||+.++|+   ++|++++|+
T Consensus        65 -----~--------------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~l~~l~~~g~~~~i~  115 (226)
T PRK13222         65 -----G--------------------REPDEELLEKLRELFDRHYAEN----VAGGSRLYPGVKETLAALKAAGYPLAVV  115 (226)
T ss_pred             -----c--------------------CCccHHHHHHHHHHHHHHHHHh----ccccCccCCCHHHHHHHHHHCCCeEEEE
Confidence                 0                    0123334444555555555442    3335789999999999   789999999


Q ss_pred             cCcH--HHHHHHHHH
Q 029420          159 TTKA--VSQMLYYES  171 (193)
Q Consensus       159 TnK~--~a~~lL~~~  171 (193)
                      ||++  .++.+++++
T Consensus       116 S~~~~~~~~~~l~~~  130 (226)
T PRK13222        116 TNKPTPFVAPLLEAL  130 (226)
T ss_pred             eCCCHHHHHHHHHHc
Confidence            9998  777888876

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.52  E-value=2.1e-13  Score=108.28  Aligned_cols=119  Identities=17%  Similarity=0.169  Sum_probs=79.3

Q ss_pred             eEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccccc
Q 029420            4 LYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKSS   83 (193)
Q Consensus         4 ~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~~~   83 (193)
                      +|+|||||||+||.+....+.+.+++.+      |++..        .+..+.+.|.+....+ .+.+...         
T Consensus         1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~-~~~~~~~---------   56 (185)
T TIGR01990         1 AVIFDLDGVITDTAEYHYLAWKALADEL------GIPFD--------EEFNESLKGVSREDSL-ERILDLG---------   56 (185)
T ss_pred             CeEEcCCCccccChHHHHHHHHHHHHHc------CCCCC--------HHHHHHhcCCChHHHH-HHHHHhc---------
Confidence            5899999999999999999999999999      56522        2345666676655544 2222110         


Q ss_pred             ccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEEcC
Q 029420           84 VSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTT  160 (193)
Q Consensus        84 ~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVvTn  160 (193)
                         +.                    .+++++..+....+.++|.+.+..  ....++||||.++|+   ++|++++|+||
T Consensus        57 ---~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~pg~~~~L~~L~~~g~~~~i~s~  111 (185)
T TIGR01990        57 ---GK--------------------KYSEEEKEELAERKNDYYVELLKE--LTPADVLPGIKNLLDDLKKNNIKIALASA  111 (185)
T ss_pred             ---CC--------------------CCCHHHHHHHHHHHHHHHHHHHHh--cCCcccCccHHHHHHHHHHCCCeEEEEeC
Confidence               10                    123344444555555555544322  223589999999999   89999999999


Q ss_pred             cHHHHHHHHHH
Q 029420          161 KAVSQMLYYES  171 (193)
Q Consensus       161 K~~a~~lL~~~  171 (193)
                      +..+..+|+++
T Consensus       112 ~~~~~~~l~~~  122 (185)
T TIGR01990       112 SKNAPTVLEKL  122 (185)
T ss_pred             CccHHHHHHhc
Confidence            77445566666

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.51  E-value=3.2e-13  Score=107.16  Aligned_cols=120  Identities=13%  Similarity=0.123  Sum_probs=78.9

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK   81 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~   81 (193)
                      .++|+|||||||+||.+....+.+.+++++      |++ .+       .+....+.|.+....+ ...+..        
T Consensus         1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~------g~~-~~-------~~~~~~~~g~~~~~~~-~~~~~~--------   57 (185)
T TIGR02009         1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKY------GIE-FD-------KQYNTSLGGLSREDIL-RAILKL--------   57 (185)
T ss_pred             CCeEEEcCCCcccCChHHHHHHHHHHHHHc------CCC-CC-------HHHHHHcCCCCHHHHH-HHHHHh--------
Confidence            378999999999999999999999999999      454 21       1334455565444433 122110        


Q ss_pred             ccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEE
Q 029420           82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIV  158 (193)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVv  158 (193)
                                     +.         .+++++++.+....+.+.|.+.+.   ....++|||+.++|+   ++|++++|+
T Consensus        58 ---------------~~---------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~l~~l~~~g~~i~i~  110 (185)
T TIGR02009        58 ---------------RK---------PGLSLETIHQLAERKNELYRELLR---LTGAEVLPGIENFLKRLKKKGIAVGLG  110 (185)
T ss_pred             ---------------cC---------CCCCHHHHHHHHHHHHHHHHHHHh---ccCCCCCcCHHHHHHHHHHcCCeEEEE
Confidence                           00         023444455555555555543321   224689999999998   789999999


Q ss_pred             cCcHHHHHHHHHH
Q 029420          159 TTKAVSQMLYYES  171 (193)
Q Consensus       159 TnK~~a~~lL~~~  171 (193)
                      ||+..++.+|+++
T Consensus       111 S~~~~~~~~l~~~  123 (185)
T TIGR02009       111 SSSKNADRILAKL  123 (185)
T ss_pred             eCchhHHHHHHHc
Confidence            9988666777766

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.51  E-value=1.2e-13  Score=112.12  Aligned_cols=107  Identities=21%  Similarity=0.286  Sum_probs=74.2

Q ss_pred             EEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccccccc
Q 029420            5 YALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKSSV   84 (193)
Q Consensus         5 vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~~~~   84 (193)
                      |+|||||||+||.+.+..+.+.+++++.     |.+..+       .+.++.++|.+++.++. + +             
T Consensus         1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~-----~~~~~~-------~~~~~~~~g~~~~~~~~-~-~-------------   53 (205)
T TIGR01454         1 VVFDLDGVLVDSFAVMREAFAIAYREVV-----GDGPAP-------FEEYRRHLGRYFPDIMR-I-M-------------   53 (205)
T ss_pred             CeecCcCccccCHHHHHHHHHHHHHHhc-----CCCCCC-------HHHHHHHhCccHHHHHH-H-c-------------
Confidence            6899999999999999999999999852     444322       35678888887666651 1 1             


Q ss_pred             cccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEEcCc
Q 029420           85 SEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTK  161 (193)
Q Consensus        85 ~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVvTnK  161 (193)
                        +                      .+.+. .+.+  ++..|.      .....++|||+.++|+   ++|++++|+||+
T Consensus        54 --~----------------------~~~~~-~~~~--~~~~~~------~~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~  100 (205)
T TIGR01454        54 --G----------------------LPLEM-EEPF--VRESYR------LAGEVEVFPGVPELLAELRADGVGTAIATGK  100 (205)
T ss_pred             --C----------------------CCHHH-HHHH--HHHHHH------hhcccccCCCHHHHHHHHHHCCCeEEEEeCC
Confidence              1                      11000 0000  111211      1235789999999999   889999999999


Q ss_pred             H--HHHHHHHHH
Q 029420          162 A--VSQMLYYES  171 (193)
Q Consensus       162 ~--~a~~lL~~~  171 (193)
                      +  .++.+++++
T Consensus       101 ~~~~~~~~l~~~  112 (205)
T TIGR01454       101 SGPRARSLLEAL  112 (205)
T ss_pred             chHHHHHHHHHc
Confidence            8  788888876

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.50  E-value=2.8e-13  Score=111.51  Aligned_cols=119  Identities=14%  Similarity=0.112  Sum_probs=78.5

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.++|+|||||||+||-+.+..+.+.+++.+      |.+...       .+.++..+|...+..+  +.+.+.      
T Consensus         6 ~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~--~~~~~~------   64 (222)
T PRK10826          6 QILAAIFDMDGLLIDSEPLWDRAELDVMASL------GVDISR-------REELPDTLGLRIDQVV--DLWYAR------   64 (222)
T ss_pred             cCcEEEEcCCCCCCcCHHHHHHHHHHHHHHC------CCCCCH-------HHHHHHhhCCCHHHHH--HHHHHh------
Confidence            4689999999999999999999999999999      554321       2445666676555443  221110      


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                                                 .++......+....+++.+.+.+    ....++|||+.++|+   ++|++++|
T Consensus        65 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~l~~l~~~g~~~~i  113 (222)
T PRK10826         65 ---------------------------QPWNGPSRQEVVQRIIARVISLI----EETRPLLPGVREALALCKAQGLKIGL  113 (222)
T ss_pred             ---------------------------cCCCCCCHHHHHHHHHHHHHHHH----hcCCCCCCCHHHHHHHHHHCCCeEEE
Confidence                                       00000011122333444443322    234689999999999   79999999


Q ss_pred             EcCcH--HHHHHHHHH
Q 029420          158 VTTKA--VSQMLYYES  171 (193)
Q Consensus       158 vTnK~--~a~~lL~~~  171 (193)
                      +||+.  .++.+++.+
T Consensus       114 ~S~~~~~~~~~~l~~~  129 (222)
T PRK10826        114 ASASPLHMLEAVLTMF  129 (222)
T ss_pred             EeCCcHHHHHHHHHhC
Confidence            99998  778888776

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.49  E-value=2.1e-13  Score=117.44  Aligned_cols=134  Identities=18%  Similarity=0.187  Sum_probs=77.1

Q ss_pred             ceEEEecCcccccCh-HHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccc
Q 029420            3 DLYALDFDGVLCDSC-GESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK   81 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~-~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~   81 (193)
                      ++|+|||||||+||. +-+..+.+.+++++      |++.....  ......++. +|.|...+.  +.+...       
T Consensus        41 k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~------G~~~~~~~--~~~~~~~~~-~g~~~~~~~--~~~~~~-------  102 (286)
T PLN02779         41 EALLFDCDGVLVETERDGHRVAFNDAFKEF------GLRPVEWD--VELYDELLN-IGGGKERMT--WYFNEN-------  102 (286)
T ss_pred             cEEEEeCceeEEccccHHHHHHHHHHHHHc------CCCCCCCC--HHHHHHHHc-cCCChHHHH--HHHHHc-------
Confidence            689999999999999 88889999999999      56422100  001122444 777765543  222110       


Q ss_pred             ccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccC-CCCCCCHHHHHH---hCCCcEEE
Q 029420           82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGA-NRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~-~~lypGV~e~L~---~~gi~laV  157 (193)
                           +.+....            .....+++..++....+.+.+.+.|.+.+... .++||||.++|+   ++|++++|
T Consensus       103 -----~~~~~~~------------~~~~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~I  165 (286)
T PLN02779        103 -----GWPTSTI------------EKAPKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAV  165 (286)
T ss_pred             -----CCCcccc------------ccCCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEE
Confidence                 0000000            00001122222222223222222232222222 489999999998   88999999


Q ss_pred             EcCcH--HHHHHHHHH
Q 029420          158 VTTKA--VSQMLYYES  171 (193)
Q Consensus       158 vTnK~--~a~~lL~~~  171 (193)
                      +||++  .+..+++++
T Consensus       166 vTn~~~~~~~~~l~~~  181 (286)
T PLN02779        166 CSTSNEKAVSKIVNTL  181 (286)
T ss_pred             EeCCCHHHHHHHHHHh
Confidence            99998  777788765

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.48  E-value=2.5e-13  Score=123.77  Aligned_cols=123  Identities=15%  Similarity=0.129  Sum_probs=79.9

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.++|+|||||||+||.+.+..+.+.++++++..   +....     ..+.+.++.++|......+ .+.+..       
T Consensus       240 m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~G~~~~~~~-~~l~~~-------  303 (459)
T PRK06698        240 MLQALIFDMDGTLFQTDKILELSLDDTFDHLRSL---QLWDT-----VTPIDKYREIMGVPLPKVW-EALLPD-------  303 (459)
T ss_pred             hhhheeEccCCceecchhHHHHHHHHHHHHHhhh---cccCC-----CCCHHHHHHHcCCChHHHH-HHHhhh-------
Confidence            6689999999999999999999999999998311   01000     0013557778887766654 222210       


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                                                 .+  .+..++....|+++|.+..   .....++|||+.++|+   ++|++++|
T Consensus       304 ---------------------------~~--~~~~~~~~~~~~~~~~~~~---~~~~~~l~pG~~e~L~~Lk~~g~~l~I  351 (459)
T PRK06698        304 ---------------------------HS--LEIREQTDAYFLERLIENI---KSGKGALYPNVKEIFTYIKENNCSIYI  351 (459)
T ss_pred             ---------------------------cc--hhHHHHHHHHHHHHhHHHH---hhcCCCcCCCHHHHHHHHHHCCCeEEE
Confidence                                       00  0001112223333332221   1234689999999999   88999999


Q ss_pred             EcCcH--HHHHHHHHH
Q 029420          158 VTTKA--VSQMLYYES  171 (193)
Q Consensus       158 vTnK~--~a~~lL~~~  171 (193)
                      +||++  .++.+++++
T Consensus       352 vS~~~~~~~~~~l~~~  367 (459)
T PRK06698        352 ASNGLTEYLRAIVSYY  367 (459)
T ss_pred             EeCCchHHHHHHHHHC
Confidence            99999  889998886

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.44  E-value=4.8e-13  Score=108.31  Aligned_cols=126  Identities=15%  Similarity=0.082  Sum_probs=76.6

Q ss_pred             ceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHH--------HHHHHHHHhhh
Q 029420            3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYE--------NLLLVRLLLEI   74 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~--------~ll~~~~l~~~   74 (193)
                      .+|+|||||||+||.+.+..+.+.+++++      |.+..+       .+.++.++|.|..        ..+ .+.+...
T Consensus         1 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~   66 (197)
T TIGR01548         1 QALVLDMDGVMADVSQSYRRAIIDTVEHF------GGVSVT-------HADIDHTKLAGNANNDWQLTHRLV-VDGLNSA   66 (197)
T ss_pred             CceEEecCceEEechHHHHHHHHHHHHHH------cCCCCC-------HHHHHHHHHccCccCchHHHHHHH-HHhhhcc
Confidence            37999999999999999999999999999      433332       3567888887632        111 1222110


Q ss_pred             cccccccccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHh--hhhc---cccCCCCCCCHHHHHH
Q 029420           75 RMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDK--DLTT---WIGANRFYPGIPDALK  149 (193)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~--y~~~---~~~~~~lypGV~e~L~  149 (193)
                                  .  ..    .+            .+....++....|++.|...  |...   -....++.|++.++|+
T Consensus        67 ------------~--~~----~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~  116 (197)
T TIGR01548        67 ------------S--SE----RV------------RDAPTLEAVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLR  116 (197)
T ss_pred             ------------c--ch----hc------------cCCccHHHHHHHHHHHHcCCcccccccchhhhccccccCHHHHHH
Confidence                        0  00    00            00111223334455544321  1000   0012345666799998


Q ss_pred             ---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          150 ---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       150 ---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                         ++|++++|+||++  .++.+|++++
T Consensus       117 ~l~~~g~~~~i~T~~~~~~~~~~l~~~g  144 (197)
T TIGR01548       117 ELHRAPKGMAVVTGRPRKDAAKFLTTHG  144 (197)
T ss_pred             HHHHcCCcEEEECCCCHHHHHHHHHHcC
Confidence               7899999999998  8889998873

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>PLN02940 riboflavin kinase

Probab=99.43  E-value=1.3e-12  Score=116.88  Aligned_cols=112  Identities=11%  Similarity=0.015  Sum_probs=76.8

Q ss_pred             ceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccccc
Q 029420            3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKS   82 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~~   82 (193)
                      ++|+|||||||+||.+.+..+.+.+++++      |.+..        .++++..+|......+ .+.+..         
T Consensus        12 k~VIFDlDGTLvDt~~~~~~a~~~~~~~~------G~~~~--------~~~~~~~~G~~~~~~~-~~~~~~---------   67 (382)
T PLN02940         12 SHVILDLDGTLLNTDGIVSDVLKAFLVKY------GKQWD--------GREAQKIVGKTPLEAA-ATVVED---------   67 (382)
T ss_pred             CEEEECCcCcCCcCHHHHHHHHHHHHHHc------CCCCC--------HHHHHHhcCCCHHHHH-HHHHHH---------
Confidence            68999999999999999999999999999      55432        2446777787665544 233221         


Q ss_pred             cccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEEc
Q 029420           83 SVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVT  159 (193)
Q Consensus        83 ~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVvT  159 (193)
                                               ++.+. ..++....+++.+.+.+     ...++|||+.++|+   ++|++++|+|
T Consensus        68 -------------------------~~~~~-~~~~~~~~~~~~~~~~~-----~~~~l~pGv~elL~~Lk~~g~~l~IvT  116 (382)
T PLN02940         68 -------------------------YGLPC-STDEFNSEITPLLSEQW-----CNIKALPGANRLIKHLKSHGVPMALAS  116 (382)
T ss_pred             -------------------------hCCCC-CHHHHHHHHHHHHHHHH-----ccCCCCcCHHHHHHHHHHCCCcEEEEe
Confidence                                     11110 01122334444444331     24689999999999   8999999999


Q ss_pred             CcH--HHHHHHH
Q 029420          160 TKA--VSQMLYY  169 (193)
Q Consensus       160 nK~--~a~~lL~  169 (193)
                      |++  .++..++
T Consensus       117 n~~~~~~~~~l~  128 (382)
T PLN02940        117 NSPRANIEAKIS  128 (382)
T ss_pred             CCcHHHHHHHHH
Confidence            998  6666665

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.42  E-value=2.1e-12  Score=105.90  Aligned_cols=115  Identities=14%  Similarity=0.042  Sum_probs=76.0

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK   81 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~   81 (193)
                      .++|+|||||||+||.+.+..+.+.+++++      |.+...       .+..+.+.|......+ .+.+.         
T Consensus         4 ~~~viFD~DGTL~d~~~~~~~a~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~-~~~~~---------   60 (221)
T PRK10563          4 IEAVFFDCDGTLVDSEVICSRAYVTMFAEF------GITLSL-------EEVFKRFKGVKLYEII-DIISK---------   60 (221)
T ss_pred             CCEEEECCCCCCCCChHHHHHHHHHHHHHc------CCCCCH-------HHHHHHhcCCCHHHHH-HHHHH---------
Confidence            489999999999999999999999999998      555221       1233455565544443 12221         


Q ss_pred             ccccccccHHHHhhhhcchhhhhhhhcCC--CHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHHhCCCcEEEEc
Q 029420           82 SSVSEGLTVEGILENWSKIKPVIMEDWSE--NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVT  159 (193)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~--~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~~~gi~laVvT  159 (193)
                                               .+|.  +.++   ....|++.+...+    ....++||||.++|+..+++++|+|
T Consensus        61 -------------------------~~~~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~gv~~~L~~L~~~~~ivT  108 (221)
T PRK10563         61 -------------------------EHGVTLAKAE---LEPVYRAEVARLF----DSELEPIAGANALLESITVPMCVVS  108 (221)
T ss_pred             -------------------------HhCCCCCHHH---HHHHHHHHHHHHH----HccCCcCCCHHHHHHHcCCCEEEEe
Confidence                                     1121  1222   2233444443322    2346899999999996679999999


Q ss_pred             CcH--HHHHHHHHH
Q 029420          160 TKA--VSQMLYYES  171 (193)
Q Consensus       160 nK~--~a~~lL~~~  171 (193)
                      |++  .++..|+.+
T Consensus       109 n~~~~~~~~~l~~~  122 (221)
T PRK10563        109 NGPVSKMQHSLGKT  122 (221)
T ss_pred             CCcHHHHHHHHHhc
Confidence            998  788888776

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.39  E-value=5.6e-12  Score=100.57  Aligned_cols=114  Identities=11%  Similarity=0.042  Sum_probs=72.2

Q ss_pred             ceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccccc
Q 029420            3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKS   82 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~~   82 (193)
                      ++|+|||||||+||.+.+..+.+.+++++      |.+..        .+.++.+.|.....++ ...+...        
T Consensus         6 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~-~~~~~~~--------   62 (188)
T PRK10725          6 AGLIFDMDGTILDTEPTHRKAWREVLGRY------GLQFD--------EQAMVALNGSPTWRIA-QAIIELN--------   62 (188)
T ss_pred             eEEEEcCCCcCccCHHHHHHHHHHHHHHc------CCCCC--------HHHHHHhcCCCHHHHH-HHHHHHh--------
Confidence            78999999999999999999999999999      55421        2345666776544443 1222110        


Q ss_pred             cccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH--hCCCcEEEEcC
Q 029420           83 SVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIYIVTT  160 (193)
Q Consensus        83 ~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~--~~gi~laVvTn  160 (193)
                          +.                    ..+.+++.+   .+..+|.+.+    .....+|||+ ++|+  ..+++++|+||
T Consensus        63 ----~~--------------------~~~~~~~~~---~~~~~~~~~~----~~~~~~~~~~-e~L~~L~~~~~l~I~T~  110 (188)
T PRK10725         63 ----QA--------------------DLDPHALAR---EKTEAVKSML----LDSVEPLPLI-EVVKAWHGRRPMAVGTG  110 (188)
T ss_pred             ----CC--------------------CCCHHHHHH---HHHHHHHHHH----hccCCCccHH-HHHHHHHhCCCEEEEcC
Confidence                00                    012222211   1222222221    2345789975 7777  55699999999


Q ss_pred             cH--HHHHHHHHH
Q 029420          161 KA--VSQMLYYES  171 (193)
Q Consensus       161 K~--~a~~lL~~~  171 (193)
                      ++  .++..|+++
T Consensus       111 ~~~~~~~~~l~~~  123 (188)
T PRK10725        111 SESAIAEALLAHL  123 (188)
T ss_pred             CchHHHHHHHHhC
Confidence            98  888888887

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.38  E-value=7.7e-12  Score=103.94  Aligned_cols=123  Identities=16%  Similarity=0.191  Sum_probs=77.0

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.++|+||||||||||.+-...+...+++++      |++..        .+..+...|.+....+  +.+.....    
T Consensus         1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~--~~~~~~~~----   60 (221)
T COG0637           1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEY------GIEIS--------DEEIRELHGGGIARII--DLLRKLAA----   60 (221)
T ss_pred             CCcEEEEcCCCCcCcchHHHHHHHHHHHHHc------CCCCC--------HHHHHHHHCCChHHHH--HHHHHHhc----
Confidence            6799999999999999999999999999999      55532        2445666665433332  11111000    


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                            +..                   +.+..   ..-..++.....     .....+++|||.++|+   ++|+++++
T Consensus        61 ------~~~-------------------~~~~~---~~~~~~~~~~~~-----~~~~~~~~pGv~~~l~~L~~~~i~~av  107 (221)
T COG0637          61 ------GED-------------------PADLA---ELERLLYEAEAL-----ELEGLKPIPGVVELLEQLKARGIPLAV  107 (221)
T ss_pred             ------CCc-------------------ccCHH---HHHHHHHHHHHh-----hhcCCCCCccHHHHHHHHHhcCCcEEE
Confidence                  000                   00000   011111211111     1345689999999999   78899999


Q ss_pred             EcCcH--HHHHHHHHH-hHHHH
Q 029420          158 VTTKA--VSQMLYYES-LQELQ  176 (193)
Q Consensus       158 vTnK~--~a~~lL~~~-~~~~~  176 (193)
                      +||.+  .++.+|+.+ +.+.+
T Consensus       108 aS~s~~~~~~~~L~~~gl~~~f  129 (221)
T COG0637         108 ASSSPRRAAERVLARLGLLDYF  129 (221)
T ss_pred             ecCChHHHHHHHHHHccChhhc
Confidence            99998  888888776 34443

>PHA02597 30

Probab=99.36  E-value=2.8e-12  Score=103.57  Aligned_cols=106  Identities=15%  Similarity=0.070  Sum_probs=65.7

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.|+|+|||||||+|+.    .+++.+++++      |++          .++++..+|.+....+. ..          
T Consensus         1 m~k~viFDlDGTLiD~~----~~~~~~~~~~------g~~----------~~~~~~~~g~~~~~~~~-~~----------   49 (197)
T PHA02597          1 MKPTILTDVDGVLLSWQ----SGLPYFAQKY------NIP----------TDHILKMIQDERFRDPG-EL----------   49 (197)
T ss_pred             CCcEEEEecCCceEchh----hccHHHHHhc------CCC----------HHHHHHHHhHhhhcCHH-HH----------
Confidence            88999999999999954    4567888888      554          14556666654332220 11          


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH--hCCCcEEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIYIV  158 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~--~~gi~laVv  158 (193)
                                                 ++.+.++..+.+..|+..       .+....++|||+.++|+  .++++++++
T Consensus        50 ---------------------------~~~~~~~~~~~~~~~~~~-------~~~~~~~~~pG~~e~L~~L~~~~~~~i~   95 (197)
T PHA02597         50 ---------------------------FGCDQELAKKLIEKYNNS-------DFIRYLSAYDDALDVINKLKEDYDFVAV   95 (197)
T ss_pred             ---------------------------hcccHHHHHHHhhhhhHH-------HHHHhccCCCCHHHHHHHHHhcCCEEEE
Confidence                                       112223333444444421       22345689999999999  444678999


Q ss_pred             cCcH-HHHH-HHHHH
Q 029420          159 TTKA-VSQM-LYYES  171 (193)
Q Consensus       159 TnK~-~a~~-lL~~~  171 (193)
                      ||++ .+.. +++++
T Consensus        96 Tn~~~~~~~~~~~~~  110 (197)
T PHA02597         96 TALGDSIDALLNRQF  110 (197)
T ss_pred             eCCccchhHHHHhhC
Confidence            9988 3333 44444

2 hypothetical protein; Provisional

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.33  E-value=6.9e-12  Score=104.84  Aligned_cols=126  Identities=11%  Similarity=0.047  Sum_probs=68.6

Q ss_pred             ceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccccc
Q 029420            3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKS   82 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~~   82 (193)
                      ++|+|||||||+||.+-+..+.+.+++.++.    ..+.... .-....+.++..++.......                
T Consensus        11 k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----------------   69 (238)
T PRK10748         11 SALTFDLDDTLYDNRPVILRTEQEALAFVQN----YHPALRS-FQNEDLQRLRQALREAEPEIY----------------   69 (238)
T ss_pred             eeEEEcCcccccCChHHHHHHHHHHHHHHHH----hCcchhh-CCHHHHHHHHHHHHHhCchhh----------------
Confidence            7899999999999999999999988877720    0111000 000011222222221111100                


Q ss_pred             cccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH--hCCCcEEEEcC
Q 029420           83 SVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIYIVTT  160 (193)
Q Consensus        83 ~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~--~~gi~laVvTn  160 (193)
                              ..+..........+++.+|++.+..+...+.+...|..     |.....+||||.++|+  +.+++++|+||
T Consensus        70 --------~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~gv~~~L~~L~~~~~l~i~Tn  136 (238)
T PRK10748         70 --------HDVTRWRWRAIEQAMLDAGLSAEEASAGADAAMINFAK-----WRSRIDVPQATHDTLKQLAKKWPLVAITN  136 (238)
T ss_pred             --------CcHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----HhhcCCCCccHHHHHHHHHcCCCEEEEEC
Confidence                    00000001112334555676655433333333333322     2334689999999999  66799999999


Q ss_pred             cH
Q 029420          161 KA  162 (193)
Q Consensus       161 K~  162 (193)
                      ++
T Consensus       137 ~~  138 (238)
T PRK10748        137 GN  138 (238)
T ss_pred             CC
Confidence            87

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.33  E-value=1.3e-11  Score=100.89  Aligned_cols=35  Identities=26%  Similarity=0.245  Sum_probs=30.8

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ..++|||+.++|+   ++|++++|+||++  .+...++++
T Consensus        92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~  131 (221)
T TIGR02253        92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERL  131 (221)
T ss_pred             hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhC
Confidence            4689999999999   7899999999997  777778776

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.33  E-value=1.1e-11  Score=100.21  Aligned_cols=129  Identities=15%  Similarity=0.146  Sum_probs=72.5

Q ss_pred             ceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhh-hhccch------hhccHHHHHHHHHHhhhc
Q 029420            3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQM-HILRPV------VETGYENLLLVRLLLEIR   75 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~-~~vr~~------Ig~G~~~ll~~~~l~~~~   75 (193)
                      ++|+|||||||+||.+....+.+.+++++      |++..+ +.+...+ +..+.+      .|.+              
T Consensus         1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~------g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--------------   59 (203)
T TIGR02252         1 KLITFDAVGTLLALKEPVGEVYCEIARKY------GVEVSP-DELEQAFRRAFKAMSEAFPNFGFS--------------   59 (203)
T ss_pred             CeEEEecCCceeeeCCCHHHHHHHHHHHh------CCCCCH-HHHHHHHHHHHHHHHhhCCCCCCC--------------
Confidence            68999999999999999999999999999      565322 1111010 001110      0000              


Q ss_pred             ccccccccccccccHHHHhhhhcchhhhhhhhcCC-CHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hC
Q 029420           76 MPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSE-NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FA  151 (193)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~-~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~  151 (193)
                                .+.+..+   -|..+....+...|. +.+.+.+.+..++++|..      ....++|||+.++|+   ++
T Consensus        60 ----------~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~l~~L~~~  120 (203)
T TIGR02252        60 ----------SGLTPQQ---WWQKLVRDTFGRAGVPDPESFEKIFEELYSYFAT------PEPWQVYPDAIKLLKDLRER  120 (203)
T ss_pred             ----------CCCCHHH---HHHHHHHHHHHhcCCCCchhHHHHHHHHHHHhcC------CCcceeCcCHHHHHHHHHHC
Confidence                      0111100   000111111122221 223334444444444321      123479999999999   78


Q ss_pred             CCcEEEEcCcH-HHHHHHHHH
Q 029420          152 SSRIYIVTTKA-VSQMLYYES  171 (193)
Q Consensus       152 gi~laVvTnK~-~a~~lL~~~  171 (193)
                      |++++|+||++ .++.+|+++
T Consensus       121 g~~~~i~Sn~~~~~~~~l~~~  141 (203)
T TIGR02252       121 GLILGVISNFDSRLRGLLEAL  141 (203)
T ss_pred             CCEEEEEeCCchhHHHHHHHC
Confidence            99999999998 667777776

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>PRK09449 dUMP phosphatase; Provisional

Probab=99.30  E-value=1.9e-11  Score=100.35  Aligned_cols=35  Identities=17%  Similarity=0.182  Sum_probs=30.4

Q ss_pred             CCCCCCCHHHHHH--hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          137 ANRFYPGIPDALK--FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       137 ~~~lypGV~e~L~--~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ..++|||+.++|+  .+|++++|+||++  .++..|+++
T Consensus        93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~  131 (224)
T PRK09449         93 ICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERT  131 (224)
T ss_pred             cCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhC
Confidence            3679999999999  7789999999998  777777776

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.29  E-value=1.9e-11  Score=121.59  Aligned_cols=120  Identities=18%  Similarity=0.232  Sum_probs=79.9

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK   81 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~   81 (193)
                      .++|+|||||||+||.+.+..+.+.+++++      |++..        .++++.++|.+...++ .......       
T Consensus        75 ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~------G~~it--------~e~~~~~~G~~~~~~~-~~~~~~~-------  132 (1057)
T PLN02919         75 VSAVLFDMDGVLCNSEEPSRRAAVDVFAEM------GVEVT--------VEDFVPFMGTGEANFL-GGVASVK-------  132 (1057)
T ss_pred             CCEEEECCCCCeEeChHHHHHHHHHHHHHc------CCCCC--------HHHHHHHhCCCHHHHH-HHHHHhc-------
Confidence            378999999999999999999999999999      56532        2446677787755543 1111000       


Q ss_pred             ccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEE
Q 029420           82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIV  158 (193)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVv  158 (193)
                           +.+                   +++.+   +..+.+.+.|.+.|...  ....+|||+.++|+   ++|++++|+
T Consensus       133 -----~l~-------------------~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~pG~~elL~~Lk~~G~~l~Iv  183 (1057)
T PLN02919        133 -----GVK-------------------GFDPD---AAKKRFFEIYLEKYAKP--NSGIGFPGALELITQCKNKGLKVAVA  183 (1057)
T ss_pred             -----CCC-------------------CCCHH---HHHHHHHHHHHHHhhhc--ccCccCccHHHHHHHHHhCCCeEEEE
Confidence                 000                   11111   22233344444444321  12358999999999   899999999


Q ss_pred             cCcH--HHHHHHHHHh
Q 029420          159 TTKA--VSQMLYYESL  172 (193)
Q Consensus       159 TnK~--~a~~lL~~~~  172 (193)
                      ||+.  .++.+|+++.
T Consensus       184 Sn~~~~~~~~~L~~~g  199 (1057)
T PLN02919        184 SSADRIKVDANLAAAG  199 (1057)
T ss_pred             eCCcHHHHHHHHHHcC
Confidence            9998  8888888874

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.22  E-value=2.4e-11  Score=97.09  Aligned_cols=35  Identities=14%  Similarity=0.030  Sum_probs=29.5

Q ss_pred             CCCCCCCHHHHHHhCCCcEEEEcCcH--HHHHHHHHH
Q 029420          137 ANRFYPGIPDALKFASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       137 ~~~lypGV~e~L~~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ..++|||+.++|+....+++|+||++  .+..+++++
T Consensus        82 ~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~~  118 (184)
T TIGR01993        82 KLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNRL  118 (184)
T ss_pred             hCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHc
Confidence            45799999999994336899999998  888888887

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>PLN02954 phosphoserine phosphatase

Probab=99.19  E-value=1.1e-10  Score=95.77  Aligned_cols=36  Identities=22%  Similarity=0.302  Sum_probs=32.4

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHhH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESLQ  173 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~~  173 (193)
                      .++|||+.++|+   ++|++++|+||++  .++.++++++-
T Consensus        83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi  123 (224)
T PLN02954         83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGI  123 (224)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCC
Confidence            469999999999   8899999999999  89999998743

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.17  E-value=8.7e-11  Score=96.86  Aligned_cols=35  Identities=11%  Similarity=0.115  Sum_probs=32.3

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ..++|||+.++|+   ++|++++|+||+.  +++++|+++
T Consensus        72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~  111 (219)
T PRK09552         72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL  111 (219)
T ss_pred             CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh
Confidence            3689999999999   8999999999999  899999886

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.16  E-value=2.9e-10  Score=92.58  Aligned_cols=30  Identities=13%  Similarity=0.091  Sum_probs=28.1

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .++|+|||||||+||.+.+..+.+.+++.+
T Consensus         1 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~   30 (224)
T TIGR02254         1 YKTLLFDLDDTILDFQAAEALALRLLFEDQ   30 (224)
T ss_pred             CCEEEEcCcCcccccchHHHHHHHHHHHHh
Confidence            478999999999999999999999999998

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.14  E-value=9.9e-11  Score=98.79  Aligned_cols=40  Identities=18%  Similarity=0.107  Sum_probs=34.2

Q ss_pred             cccCCCCCCCHHHHHH---hCCCcEEEEcCc----H--HHHHHHHHHhH
Q 029420          134 WIGANRFYPGIPDALK---FASSRIYIVTTK----A--VSQMLYYESLQ  173 (193)
Q Consensus       134 ~~~~~~lypGV~e~L~---~~gi~laVvTnK----~--~a~~lL~~~~~  173 (193)
                      +...+.++||+.++|+   ++|++++|||||    +  .++.++++++-
T Consensus       109 ~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi  157 (237)
T TIGR01672       109 WDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHI  157 (237)
T ss_pred             cccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCC
Confidence            3456789999999999   999999999998    5  88888888743

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.13  E-value=3.7e-10  Score=87.36  Aligned_cols=28  Identities=21%  Similarity=0.134  Sum_probs=26.7

Q ss_pred             eEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            4 LYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         4 ~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      +|+||+||||+||.+.+..+.+.+++++
T Consensus         1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~   28 (154)
T TIGR01549         1 AILFDIDGTLVDSSFAIRRAFEETLEEF   28 (154)
T ss_pred             CeEecCCCcccccHHHHHHHHHHHHHHh
Confidence            4899999999999999999999999999

HAD subfamilies caused by an overly broad single model.

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.11  E-value=1.1e-10  Score=90.00  Aligned_cols=109  Identities=22%  Similarity=0.305  Sum_probs=70.5

Q ss_pred             EEEecCcccccChHHHHHHHHH-HHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccccc
Q 029420            5 YALDFDGVLCDSCGESSLSAVK-AAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKSS   83 (193)
Q Consensus         5 vlFDlDGTLvDS~~di~~a~~~-al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~~~   83 (193)
                      |+||+||||+|+-+.+..+... +++.+      |.+ .       ..+.++...+.+.+..+ .+.+..          
T Consensus         1 iifD~dgtL~d~~~~~~~~~~~~~~~~~------~~~-~-------~~~~~~~~~~~~~~~~~-~~~~~~----------   55 (176)
T PF13419_consen    1 IIFDLDGTLVDTDPAIFRALQRLALEEF------GLE-I-------SAEELRELFGKSYEEAL-ERLLER----------   55 (176)
T ss_dssp             EEEESBTTTEEHHHHHHHHHHHHHHHHT------THH-H-------HHHHHHHHTTSHHHHHH-HHHHHH----------
T ss_pred             cEEECCCCcEeCHHHHHHHHHHHHHHHh------CCC-C-------CHHHHHHHhCCCHHHHH-HHhhhc----------
Confidence            7999999999999988888886 46667      333 1       23455555565555444 222211          


Q ss_pred             ccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEEcC
Q 029420           84 VSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTT  160 (193)
Q Consensus        84 ~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVvTn  160 (193)
                                              ++.+...+.+.+   +++.       .....++|||+.++|+   ++|++++|+||
T Consensus        56 ------------------------~~~~~~~~~~~~---~~~~-------~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn  101 (176)
T PF13419_consen   56 ------------------------FGIDPEEIQELF---REYN-------LESKLQPYPGVRELLERLKAKGIPLVIVSN  101 (176)
T ss_dssp             ------------------------HHHHHHHHHHHH---HHHH-------HHGGEEESTTHHHHHHHHHHTTSEEEEEES
T ss_pred             ------------------------cchhHHHHHHHh---hhhh-------hhhccchhhhhhhhhhhcccccceeEEeec
Confidence                                    111111122222   2221       1234689999999999   69999999999


Q ss_pred             cH--HHHHHHHHHh
Q 029420          161 KA--VSQMLYYESL  172 (193)
Q Consensus       161 K~--~a~~lL~~~~  172 (193)
                      .+  .++.+++.+.
T Consensus       102 ~~~~~~~~~l~~~~  115 (176)
T PF13419_consen  102 GSRERIERVLERLG  115 (176)
T ss_dssp             SEHHHHHHHHHHTT
T ss_pred             CCcccccccccccc
Confidence            99  7888888874

...

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=99.10  E-value=1.7e-09  Score=89.37  Aligned_cols=55  Identities=18%  Similarity=0.397  Sum_probs=45.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH----hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          109 SENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK----FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       109 g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~----~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      |.+.+++++..+.|++.|.+        .+.+|||+.++|+    ++|++++|||||+  .++++.+..
T Consensus        72 g~~~~~l~~~~~~f~~~~~~--------~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~  132 (210)
T TIGR01545        72 GHREAHLQDLEADFVAAFRD--------KVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS  132 (210)
T ss_pred             CCCHHHHHHHHHHHHHHHHH--------hCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc
Confidence            77888888888888887753        2478999999994    5799999999999  788888663

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.06  E-value=3.2e-10  Score=92.29  Aligned_cols=26  Identities=15%  Similarity=0.227  Sum_probs=23.8

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      ..++|||+.++|+   ++|++++|+||++
T Consensus        92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~  120 (211)
T TIGR02247        92 NTKLRPSMMAAIKTLRAKGFKTACITNNF  120 (211)
T ss_pred             ccccChhHHHHHHHHHHCCCeEEEEeCCC
Confidence            4679999999999   7899999999987

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.05  E-value=4.9e-10  Score=89.82  Aligned_cols=36  Identities=6%  Similarity=-0.062  Sum_probs=32.3

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      ..++|||+.++|+   ++|++++|+||+.  +++.++++++
T Consensus        78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g  118 (201)
T TIGR01491        78 EISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLN  118 (201)
T ss_pred             hCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhC
Confidence            3579999999999   7899999999999  8899988874

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.04  E-value=5.5e-10  Score=90.08  Aligned_cols=35  Identities=17%  Similarity=0.192  Sum_probs=30.7

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      .++|||+.++|+   ++|++++|+||.+  .++.++++++
T Consensus        91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~g  130 (198)
T TIGR01428        91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAG  130 (198)
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCC
Confidence            479999999999   7799999999998  7888888763

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=98.96  E-value=3.6e-09  Score=85.54  Aligned_cols=35  Identities=14%  Similarity=0.062  Sum_probs=31.1

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      ..++|||+.++|+   ++ ++++|+||+.  +++.+++++.
T Consensus        66 ~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~g  105 (205)
T PRK13582         66 TLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLG  105 (205)
T ss_pred             hCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcC
Confidence            4679999999999   56 9999999999  8999999884

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=98.96  E-value=3.6e-09  Score=87.93  Aligned_cols=36  Identities=8%  Similarity=-0.029  Sum_probs=31.4

Q ss_pred             cCCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          136 GANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       136 ~~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ...++|||+.++|+   ++|++++|+||++  .++..++++
T Consensus        90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~  130 (224)
T PRK14988         90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHT  130 (224)
T ss_pred             ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHC
Confidence            35789999999999   8899999999988  777777776

>PLN02811 hydrolase

Probab=98.95  E-value=8.3e-09  Score=84.99  Aligned_cols=101  Identities=16%  Similarity=0.119  Sum_probs=64.0

Q ss_pred             cCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccccccccccc
Q 029420            9 FDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKSSVSEGL   88 (193)
Q Consensus         9 lDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~~~~~~~~   88 (193)
                      |||||+||.+.+..+.+.+++++      |++ .+       .+.++.++|.+....+ ...+...            +.
T Consensus         1 ~DGTL~Ds~~~~~~a~~~~~~~~------g~~-~~-------~~~~~~~~G~~~~~~~-~~~~~~~------------~~   53 (220)
T PLN02811          1 MDGLLLDTEKFYTEVQEKILARY------GKT-FD-------WSLKAKMMGKKAIEAA-RIFVEES------------GL   53 (220)
T ss_pred             CCCcceecHHHHHHHHHHHHHHc------CCC-CC-------HHHHHHccCCCHHHHH-HHHHHHh------------CC
Confidence            79999999999999999999999      564 21       2456778887765554 1222110            00


Q ss_pred             cHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420           89 TVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus        89 ~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      +.                  ..+.+++.+    ++..+...+    .....+||||.++|+   ++|++++|+||+.
T Consensus        54 ~~------------------~~~~~~~~~----~~~~~~~~~----~~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~  104 (220)
T PLN02811         54 SD------------------SLSPEDFLV----EREAMLQDL----FPTSDLMPGAERLVRHLHAKGIPIAIATGSH  104 (220)
T ss_pred             CC------------------CCCHHHHHH----HHHHHHHHH----HhhCCCCccHHHHHHHHHHCCCcEEEEeCCc
Confidence            00                  001121212    122222211    224689999999999   8899999999987

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=98.93  E-value=2.9e-09  Score=84.02  Aligned_cols=31  Identities=16%  Similarity=0.219  Sum_probs=26.6

Q ss_pred             CCCCCCCHHHHHHhCCCcEEEEcCcH--HHHHHHHHH
Q 029420          137 ANRFYPGIPDALKFASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       137 ~~~lypGV~e~L~~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ...+|||+.++|+    +++|+||++  ..+.+++++
T Consensus        88 ~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~~  120 (175)
T TIGR01493        88 NLPPWPDSAAALA----RVAILSNASHWAFDQFAQQA  120 (175)
T ss_pred             cCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHHC
Confidence            3579999999996    589999999  778888887

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=98.91  E-value=5.3e-09  Score=85.48  Aligned_cols=34  Identities=6%  Similarity=0.062  Sum_probs=30.6

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      .+++||+.++|+   ++|++++|+||..  .++.+++.+
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~  122 (219)
T TIGR00338        84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKL  122 (219)
T ss_pred             CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc
Confidence            579999999999   7899999999988  888888876

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=98.65  E-value=1.2e-07  Score=76.79  Aligned_cols=24  Identities=8%  Similarity=0.261  Sum_probs=22.7

Q ss_pred             CCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          139 RFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       139 ~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      .+||||.++|+   ++|++++|+||++
T Consensus        84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~  110 (199)
T PRK09456         84 ALRPEVIAIMHKLREQGHRVVVLSNTN  110 (199)
T ss_pred             ccCHHHHHHHHHHHhCCCcEEEEcCCc
Confidence            58999999999   7899999999998

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=98.64  E-value=2.2e-07  Score=73.44  Aligned_cols=34  Identities=6%  Similarity=0.080  Sum_probs=30.8

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      .+++||+.++|+   ++|++++|+||++  .++.+++++
T Consensus        71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~  109 (188)
T TIGR01489        71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGI  109 (188)
T ss_pred             CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHc
Confidence            589999999999   8899999999998  888888876

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=98.60  E-value=1.7e-07  Score=73.71  Aligned_cols=32  Identities=16%  Similarity=0.256  Sum_probs=26.5

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH-HHHHHHH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA-VSQMLYY  169 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~-~a~~lL~  169 (193)
                      .++|||+.++|+   ++|++++|+||.+ ....++.
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~~~~~~  119 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDHAVLVQ  119 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHHHHHHH
Confidence            589999999999   7899999999999 3344444

HAD subfamilies caused by an overly broad single model.

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=98.59  E-value=2.4e-07  Score=76.34  Aligned_cols=37  Identities=14%  Similarity=0.013  Sum_probs=31.4

Q ss_pred             CCCCCCHHHHHH--hCCCcEEEEcCcH--HHHHHHHHHhHH
Q 029420          138 NRFYPGIPDALK--FASSRIYIVTTKA--VSQMLYYESLQE  174 (193)
Q Consensus       138 ~~lypGV~e~L~--~~gi~laVvTnK~--~a~~lL~~~~~~  174 (193)
                      .++|||+.++|+  .++.+++|+||+.  ++++++++++.+
T Consensus        67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~  107 (203)
T TIGR02137        67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFP  107 (203)
T ss_pred             CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCc
Confidence            579999999999  3345999999999  999999998543

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=98.58  E-value=7.7e-07  Score=71.67  Aligned_cols=55  Identities=11%  Similarity=0.136  Sum_probs=42.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          109 SENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       109 g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      |++.+++.+....+.+.+.         ...+|||+.++|+   ++|++++|+||++  .++.+++++.
T Consensus        66 g~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg  125 (202)
T TIGR01490        66 GLLEEDVRAIVEEFVNQKI---------ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILG  125 (202)
T ss_pred             CCCHHHHHHHHHHHHHHHH---------HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcC
Confidence            7788777666655544332         2479999999998   8899999999999  8888888763

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=98.46  E-value=3.2e-06  Score=70.81  Aligned_cols=105  Identities=11%  Similarity=0.061  Sum_probs=70.7

Q ss_pred             ceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccccc
Q 029420            3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKS   82 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~~   82 (193)
                      .+++||+||||+||-.-+..+.+..+.++|      .+..        .+......|.+...+.  +.+....       
T Consensus        11 ~~~lfD~dG~lvdte~~y~~~~~~~~~~yg------k~~~--------~~~~~~~mG~~~~eaa--~~~~~~~-------   67 (222)
T KOG2914|consen   11 SACLFDMDGTLVDTEDLYTEAWQELLDRYG------KPYP--------WDVKVKSMGKRTSEAA--RLFVKKL-------   67 (222)
T ss_pred             eeEEEecCCcEEecHHHHHHHHHHHHHHcC------CCCh--------HHHHHHHcCCCHHHHH--HHHHhhc-------
Confidence            478999999999999999999999999994      4321        3445568887777665  3332100       


Q ss_pred             cccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEEc
Q 029420           83 SVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVT  159 (193)
Q Consensus        83 ~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVvT  159 (193)
                          ..                    .++.+++......-...        ......+.||+..++.   ..|++++++|
T Consensus        68 ----~d--------------------p~s~ee~~~e~~~~~~~--------~~~~~~~~PGa~kLv~~L~~~gip~alat  115 (222)
T KOG2914|consen   68 ----PD--------------------PVSREEFNKEEEEILDR--------LFMNSILMPGAEKLVNHLKNNGIPVALAT  115 (222)
T ss_pred             ----CC--------------------CCCHHHHHHHHHHHHHH--------hccccccCCcHHHHHHHHHhCCCCeeEEe
Confidence                00                    12333222222222221        1346789999999999   9999999999


Q ss_pred             CcH
Q 029420          160 TKA  162 (193)
Q Consensus       160 nK~  162 (193)
                      |-+
T Consensus       116 ~s~  118 (222)
T KOG2914|consen  116 SST  118 (222)
T ss_pred             cCC
Confidence            986

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=98.43  E-value=1.8e-06  Score=71.62  Aligned_cols=37  Identities=14%  Similarity=0.188  Sum_probs=33.1

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHhHH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESLQE  174 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~~~  174 (193)
                      .+++||..++++   ++|.+++|+|.-+  +++++.+.++-+
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d  117 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGID  117 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCc
Confidence            689999999999   9999999999999  899998887543

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=98.41  E-value=6.2e-07  Score=73.69  Aligned_cols=34  Identities=9%  Similarity=0.077  Sum_probs=31.5

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ..++||+.++|+   ++|++++|+||+.  +++++++++
T Consensus        69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~  107 (214)
T TIGR03333        69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGI  107 (214)
T ss_pred             CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhh
Confidence            689999999999   8899999999999  888899887

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=98.34  E-value=4.2e-07  Score=76.80  Aligned_cols=41  Identities=17%  Similarity=0.146  Sum_probs=33.6

Q ss_pred             hccccCCCCCCCHHHHHH---hCCCcEEEEcCc----H--HHHHHHHHHh
Q 029420          132 TTWIGANRFYPGIPDALK---FASSRIYIVTTK----A--VSQMLYYESL  172 (193)
Q Consensus       132 ~~~~~~~~lypGV~e~L~---~~gi~laVvTnK----~--~a~~lL~~~~  172 (193)
                      +++...+.||||+.++|+   ++|+++++|||+    .  .++.++++++
T Consensus       107 ~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~g  156 (237)
T PRK11009        107 NGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFH  156 (237)
T ss_pred             hcccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcC
Confidence            345567899999999999   999999999994    3  7777777663

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=98.32  E-value=1.4e-06  Score=68.50  Aligned_cols=35  Identities=11%  Similarity=0.010  Sum_probs=31.5

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      ..++||+.++|+   ++|++++|+|+..  +++.++++++
T Consensus        72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g  111 (177)
T TIGR01488        72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLG  111 (177)
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcC
Confidence            468999999999   8999999999998  8999998873

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=98.27  E-value=2.9e-06  Score=74.65  Aligned_cols=35  Identities=11%  Similarity=0.123  Sum_probs=30.9

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      .+++||+.++|+   ++|++++|+||..  +++.+++++.
T Consensus       180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lg  219 (322)
T PRK11133        180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLR  219 (322)
T ss_pred             CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcC
Confidence            579999999999   8999999999999  8888877653

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=98.19  E-value=1.9e-05  Score=64.41  Aligned_cols=40  Identities=18%  Similarity=0.037  Sum_probs=30.2

Q ss_pred             CCCCCCCHHHHHH--hCCCcEEEEcC-cH-HHHHHHHHHh-HHHH
Q 029420          137 ANRFYPGIPDALK--FASSRIYIVTT-KA-VSQMLYYESL-QELQ  176 (193)
Q Consensus       137 ~~~lypGV~e~L~--~~gi~laVvTn-K~-~a~~lL~~~~-~~~~  176 (193)
                      ..++||++.+.|+  ...++++|+|| -. .+...|+.++ .+++
T Consensus        97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~F  141 (229)
T COG1011          97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYF  141 (229)
T ss_pred             hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhh
Confidence            3689999999999  22288999999 44 7778888773 4443

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=98.08  E-value=3.4e-06  Score=68.18  Aligned_cols=36  Identities=8%  Similarity=-0.045  Sum_probs=31.9

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCc-H--HHHHHHHHHh
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTK-A--VSQMLYYESL  172 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK-~--~a~~lL~~~~  172 (193)
                      ...+||||.++|+   ++|++++|+||+ +  .++.+|+.+.
T Consensus        43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~   84 (174)
T TIGR01685        43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFE   84 (174)
T ss_pred             EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCC
Confidence            4689999999999   899999999998 6  8888888874

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=98.00  E-value=7.6e-06  Score=61.84  Aligned_cols=25  Identities=40%  Similarity=0.675  Sum_probs=22.5

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      .++||||.++|+   ++|++++|+||++
T Consensus        24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~   51 (132)
T TIGR01662        24 RILYPEVPDALAELKEAGYKVVIVTNQS   51 (132)
T ss_pred             heeCCCHHHHHHHHHHCCCEEEEEECCc
Confidence            468999999998   8999999999986

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=97.87  E-value=7.8e-05  Score=62.97  Aligned_cols=36  Identities=11%  Similarity=0.181  Sum_probs=31.4

Q ss_pred             CCCCCCCHHHHHH-----hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          137 ANRFYPGIPDALK-----FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       137 ~~~lypGV~e~L~-----~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      ..++-||+.++++     ..|+.+.|+|.-.  +.+.+|++.+
T Consensus        69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~g  111 (234)
T PF06888_consen   69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHG  111 (234)
T ss_pred             cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCC
Confidence            3578899999999     3699999999988  9999999884

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=97.84  E-value=0.00012  Score=61.06  Aligned_cols=41  Identities=20%  Similarity=0.343  Sum_probs=32.4

Q ss_pred             hhhccccCCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          130 DLTTWIGANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       130 y~~~~~~~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      |..+ ...+.+||||.++|+   ++|++++|+||++  ..+.+++++
T Consensus        87 Y~~~-~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~  132 (220)
T TIGR01691        87 YESG-ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHS  132 (220)
T ss_pred             HhcC-CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhc
Confidence            4443 445789999999999   8999999999999  556666654

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=97.72  E-value=4.6e-05  Score=61.04  Aligned_cols=36  Identities=19%  Similarity=0.249  Sum_probs=30.8

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      ...++||+.++|+   ++|++++|+|+-.  .+..+.+.++
T Consensus       125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lg  165 (215)
T PF00702_consen  125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLG  165 (215)
T ss_dssp             EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTT
T ss_pred             cCcchhhhhhhhhhhhccCcceeeeeccccccccccccccc
Confidence            3478999999999   8999999999876  8888887764

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=97.62  E-value=3.5e-05  Score=61.57  Aligned_cols=25  Identities=24%  Similarity=0.276  Sum_probs=22.9

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      ..+|||+.++|+   ++|++++|+||++
T Consensus        28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~   55 (181)
T PRK08942         28 WIPIPGSIEAIARLKQAGYRVVVATNQS   55 (181)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence            368999999999   8899999999996

>PRK08238 hypothetical protein; Validated

Probab=97.56  E-value=0.00029  Score=65.18  Aligned_cols=34  Identities=15%  Similarity=0.180  Sum_probs=31.0

Q ss_pred             CCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          139 RFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       139 ~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      +++||+.+.|+   ++|++++|+||++  .+++++++++
T Consensus        72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lG  110 (479)
T PRK08238         72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLG  110 (479)
T ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcC
Confidence            46799999999   8999999999999  8999999874

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=97.50  E-value=0.00045  Score=54.58  Aligned_cols=34  Identities=12%  Similarity=0.281  Sum_probs=27.6

Q ss_pred             CCCCCHH----HHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          139 RFYPGIP----DALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       139 ~lypGV~----e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      .+|||+.    ++|+   ++|+++.|+|+.+  .++.+++.++
T Consensus        85 ~~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~  127 (192)
T PF12710_consen   85 KLFPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLG  127 (192)
T ss_dssp             HHCTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTT
T ss_pred             ccCcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcC
Confidence            4555555    9998   8999999999999  8888887663

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=97.44  E-value=0.00048  Score=59.23  Aligned_cols=35  Identities=14%  Similarity=0.153  Sum_probs=28.4

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH-----HHHHHHHHH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA-----VSQMLYYES  171 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~-----~a~~lL~~~  171 (193)
                      ...++||+.++|+   ++|++++|+||++     .+...|+.+
T Consensus       116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~  158 (266)
T TIGR01533       116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRF  158 (266)
T ss_pred             CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHc
Confidence            5689999999999   9999999999987     333555554

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=97.39  E-value=0.00017  Score=67.42  Aligned_cols=23  Identities=35%  Similarity=0.642  Sum_probs=22.1

Q ss_pred             CCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          140 FYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       140 lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      +||||.+.|+   ++|++++|+|||+
T Consensus       198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~  223 (526)
T TIGR01663       198 IFPEIPEKLKELEADGFKICIFTNQG  223 (526)
T ss_pred             cccCHHHHHHHHHHCCCEEEEEECCc
Confidence            7999999999   9999999999998

Note that the EC number for the kinase function is: 2.7.1.78

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=97.33  E-value=0.0029  Score=53.18  Aligned_cols=109  Identities=16%  Similarity=0.246  Sum_probs=70.4

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhcc-HHHHHHHHHHhhhcccccc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETG-YENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G-~~~ll~~~~l~~~~~~~~~   80 (193)
                      +-+++||||-|+||-=.|.+-.     +.+      +...        .+.++|+-+.+| |..++ .|.+.+-+     
T Consensus        13 ril~~FDFD~TIid~dSD~wVv-----~~l------p~~~--------l~~qL~~t~p~~~Wne~M-~rv~k~Lh-----   67 (256)
T KOG3120|consen   13 RILLVFDFDRTIIDQDSDNWVV-----DEL------PTTD--------LFNQLRDTYPKGFWNELM-DRVFKELH-----   67 (256)
T ss_pred             cEEEEEecCceeecCCcchHHH-----Hhc------ccch--------hHHHHHHhcccchHHHHH-HHHHHHHH-----
Confidence            3579999999999987765532     333      2222        247788888755 55555 56664311     


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCC-cEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASS-RIY  156 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi-~la  156 (193)
                                                +-|.+.+++       ++.++         ....-||+.++++   +.|. .+.
T Consensus        68 --------------------------eqgv~~~~i-------k~~~r---------~iP~~Pgmv~lik~~ak~g~~eli  105 (256)
T KOG3120|consen   68 --------------------------EQGVRIAEI-------KQVLR---------SIPIVPGMVRLIKSAAKLGCFELI  105 (256)
T ss_pred             --------------------------HcCCCHHHH-------HHHHh---------cCCCCccHHHHHHHHHhCCCceEE
Confidence                                      113444322       22222         2356799999999   5664 888


Q ss_pred             EEcCcH--HHHHHHHHH-hHHHHH
Q 029420          157 IVTTKA--VSQMLYYES-LQELQY  177 (193)
Q Consensus       157 VvTnK~--~a~~lL~~~-~~~~~~  177 (193)
                      |+|--.  |.+.+|++. .-+|+-
T Consensus       106 IVSDaNsfFIe~~Lea~~~~d~F~  129 (256)
T KOG3120|consen  106 IVSDANSFFIEEILEAAGIHDLFS  129 (256)
T ss_pred             EEecCchhHHHHHHHHccHHHHHH
Confidence            998877  999999999 556654

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=97.19  E-value=0.0017  Score=52.40  Aligned_cols=28  Identities=29%  Similarity=0.339  Sum_probs=19.7

Q ss_pred             ccCCCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          135 IGANRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       135 ~~~~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      ....+|+||+.|+|+   +.|..+.++|+.+
T Consensus        69 f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~   99 (191)
T PF06941_consen   69 FSNLPPIPGAVEALKKLRDKGHEIVIITARP   99 (191)
T ss_dssp             TTT--B-TTHHHHHHHHHTSTTEEEEEEE-S
T ss_pred             hcCCCccHHHHHHHHHHHHcCCcEEEEEecC
Confidence            445689999999999   7887788888776

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=96.89  E-value=0.00056  Score=56.00  Aligned_cols=30  Identities=33%  Similarity=0.407  Sum_probs=24.0

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .|+|+|||||||+|+-..+......+++++
T Consensus         3 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l   32 (230)
T PRK01158          3 IKAIAIDIDGTITDKDRRLSLKAVEAIRKA   32 (230)
T ss_pred             eeEEEEecCCCcCCCCCccCHHHHHHHHHH
Confidence            699999999999998766666666666665

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=96.83  E-value=0.00067  Score=57.37  Aligned_cols=31  Identities=26%  Similarity=0.204  Sum_probs=24.5

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      |.|+|+||+||||+++-..+......+++++
T Consensus         1 m~kli~~DlDGTLl~~~~~i~~~~~~ai~~l   31 (272)
T PRK15126          1 MARLAAFDMDGTLLMPDHHLGEKTLSTLARL   31 (272)
T ss_pred             CccEEEEeCCCcCcCCCCcCCHHHHHHHHHH
Confidence            8899999999999997665666665666665

>PRK10976 putative hydrolase; Provisional

Probab=96.80  E-value=0.00072  Score=56.82  Aligned_cols=31  Identities=29%  Similarity=0.224  Sum_probs=24.7

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      |.|+|+||+||||+|+-..+......+++++
T Consensus         1 mikli~~DlDGTLl~~~~~is~~~~~ai~~l   31 (266)
T PRK10976          1 MYQVVASDLDGTLLSPDHTLSPYAKETLKLL   31 (266)
T ss_pred             CceEEEEeCCCCCcCCCCcCCHHHHHHHHHH
Confidence            7899999999999998666666666666665

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=96.65  E-value=0.0014  Score=51.99  Aligned_cols=25  Identities=32%  Similarity=0.352  Sum_probs=23.1

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCc
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTK  161 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK  161 (193)
                      ..++||||.++|+   ++|++++|+|||
T Consensus        27 ~~~~~pgv~e~L~~L~~~g~~l~IvSN~   54 (161)
T TIGR01261        27 KLRFEKGVIPALLKLKKAGYKFVMVTNQ   54 (161)
T ss_pred             HeeECCCHHHHHHHHHHCCCeEEEEeCC
Confidence            4589999999999   889999999997

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=96.63  E-value=0.0011  Score=55.45  Aligned_cols=31  Identities=23%  Similarity=0.191  Sum_probs=23.8

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      +.|+|+||+||||+|+-..+......+++++
T Consensus         2 ~~kli~~DlDGTLl~~~~~i~~~~~~ai~~~   32 (272)
T PRK10530          2 TYRVIALDLDGTLLTPKKTILPESLEALARA   32 (272)
T ss_pred             CccEEEEeCCCceECCCCccCHHHHHHHHHH
Confidence            1699999999999998766666555666655

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=96.59  E-value=0.014  Score=49.42  Aligned_cols=138  Identities=13%  Similarity=0.156  Sum_probs=74.3

Q ss_pred             ceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccccc
Q 029420            3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKS   82 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~~   82 (193)
                      ++|.||++|||..+.+......-.+.+.+      |++-.+        +++..........+..       .+|.-   
T Consensus         8 ravtfD~~~tLl~~~~~~~~~y~~i~~~~------gl~~~~--------~~~~~~~~~~~~~~~~-------~~p~~---   63 (237)
T KOG3085|consen    8 RAVTFDAGGTLLATLPPVMEVYCEIAEAY------GLEYDD--------SLIETIFRKDFKKMSE-------KGPFF---   63 (237)
T ss_pred             EEEEEeCCCceeecCCccHHHHHHHHHHh------CCCCCH--------HHHhHhhhHHHHhhcc-------cCCcc---
Confidence            79999999999999999998888899999      676321        3333333333222110       00000   


Q ss_pred             ccccc-ccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEE
Q 029420           83 SVSEG-LTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIV  158 (193)
Q Consensus        83 ~~~~~-~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVv  158 (193)
                      ....+ .+...   =|+.+.......-  ..+..++..+.+...+.+.+.   ....++.+|+.++|+   .+|..++|+
T Consensus        64 ~~~~g~l~~~~---ww~~lv~~~f~~~--~~~~~~~~~~~~~~~~~s~~~---~~~~~~~~~~~~~lq~lR~~g~~l~ii  135 (237)
T KOG3085|consen   64 GLYSGELTLSQ---WWPKLVESTFGKA--GIDYEEELLENFSFRLFSTFA---PSAWKYLDGMQELLQKLRKKGTILGII  135 (237)
T ss_pred             cccCCcccHHH---HHHHHHHHHhccc--cchhHHHHHhhhhhheecccc---ccCceeccHHHHHHHHHHhCCeEEEEe
Confidence            00001 11110   0111221111111  122223333333333322221   223567899999999   899999999


Q ss_pred             cCcH-HHHHHHHHHh
Q 029420          159 TTKA-VSQMLYYESL  172 (193)
Q Consensus       159 TnK~-~a~~lL~~~~  172 (193)
                      ||=. -.+.++..+.
T Consensus       136 sN~d~r~~~~l~~~~  150 (237)
T KOG3085|consen  136 SNFDDRLRLLLLPLG  150 (237)
T ss_pred             cCCcHHHHHHhhccC
Confidence            9998 7777777763

>PTZ00174 phosphomannomutase; Provisional

Probab=96.52  E-value=0.0014  Score=55.01  Aligned_cols=29  Identities=14%  Similarity=0.155  Sum_probs=25.1

Q ss_pred             ceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            3 DLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      |+|+|||||||+|+-..+......+++++
T Consensus         6 klia~DlDGTLL~~~~~is~~~~~ai~~l   34 (247)
T PTZ00174          6 TILLFDVDGTLTKPRNPITQEMKDTLAKL   34 (247)
T ss_pred             eEEEEECcCCCcCCCCCCCHHHHHHHHHH
Confidence            89999999999999887877777777776

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=96.49  E-value=0.0015  Score=54.90  Aligned_cols=30  Identities=27%  Similarity=0.222  Sum_probs=23.8

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .|+|+|||||||+++-..+......+++++
T Consensus         3 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l   32 (270)
T PRK10513          3 IKLIAIDMDGTLLLPDHTISPAVKQAIAAA   32 (270)
T ss_pred             eEEEEEecCCcCcCCCCccCHHHHHHHHHH
Confidence            699999999999998666666666666665

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=96.49  E-value=0.0019  Score=51.09  Aligned_cols=39  Identities=13%  Similarity=0.013  Sum_probs=35.2

Q ss_pred             cCCCCCCCHHHHHH--hCCCcEEEEcCcH--HHHHHHHHHhHH
Q 029420          136 GANRFYPGIPDALK--FASSRIYIVTTKA--VSQMLYYESLQE  174 (193)
Q Consensus       136 ~~~~lypGV~e~L~--~~gi~laVvTnK~--~a~~lL~~~~~~  174 (193)
                      ..+++|||+.++|+  ..+++++|+|||+  .|.++++.+.+.
T Consensus        55 ~~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~ldp~   97 (156)
T TIGR02250        55 YLTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPD   97 (156)
T ss_pred             EEEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHHhCcC
Confidence            35789999999999  7779999999999  999999999766

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=96.44  E-value=0.0029  Score=50.40  Aligned_cols=24  Identities=33%  Similarity=0.544  Sum_probs=22.7

Q ss_pred             CCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          139 RFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       139 ~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      .+||||.++|+   ++|++++|+|||+
T Consensus        42 ~~~pgv~e~L~~Lk~~G~~l~I~TN~~   68 (166)
T TIGR01664        42 FLYPEIPAKLQELDDEGYKIVIFTNQS   68 (166)
T ss_pred             EecCCHHHHHHHHHHCCCEEEEEeCCc
Confidence            48999999999   8999999999998

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=96.43  E-value=0.0042  Score=49.39  Aligned_cols=25  Identities=28%  Similarity=0.417  Sum_probs=23.4

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      .++||||.++|+   ++|++++|+|||+
T Consensus        25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~   52 (176)
T TIGR00213        25 FEFIDGVIDALRELKKMGYALVLVTNQS   52 (176)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence            469999999999   8999999999998

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.41  E-value=0.002  Score=54.77  Aligned_cols=31  Identities=35%  Similarity=0.210  Sum_probs=22.2

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      |.|+|++|+||||+|+-..+...+..+++.+
T Consensus         3 ~~kli~~DlDGTLl~~~~~~~~~~~~ai~~l   33 (273)
T PRK00192          3 MKLLVFTDLDGTLLDHHTYSYEPAKPALKAL   33 (273)
T ss_pred             cceEEEEcCcccCcCCCCcCcHHHHHHHHHH
Confidence            7899999999999985444444444455554

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=96.34  E-value=0.0056  Score=54.52  Aligned_cols=39  Identities=10%  Similarity=-0.032  Sum_probs=34.5

Q ss_pred             ccccCCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          133 TWIGANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       133 ~~~~~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      +......++||+.++|+   ++|++++|+|||+  +++.+++++
T Consensus       178 dp~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l  221 (343)
T TIGR02244       178 NPEKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYL  221 (343)
T ss_pred             CHHHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence            34445678999999999   8999999999999  999999997

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=96.32  E-value=0.0022  Score=53.85  Aligned_cols=31  Identities=35%  Similarity=0.343  Sum_probs=27.5

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      |.++|+||+||||+++-..+...+..+++++
T Consensus         2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~~   32 (264)
T COG0561           2 MIKLLAFDLDGTLLDSNKTISPETKEALARL   32 (264)
T ss_pred             CeeEEEEcCCCCccCCCCccCHHHHHHHHHH
Confidence            5799999999999999998888888888855

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=96.30  E-value=0.0022  Score=48.71  Aligned_cols=34  Identities=15%  Similarity=-0.033  Sum_probs=30.1

Q ss_pred             CCCCCHHHHHH---hCCCcEEEEcCc-H--HHHHHHHHHh
Q 029420          139 RFYPGIPDALK---FASSRIYIVTTK-A--VSQMLYYESL  172 (193)
Q Consensus       139 ~lypGV~e~L~---~~gi~laVvTnK-~--~a~~lL~~~~  172 (193)
                      ++|||+.++|+   ++|++++|+||+ +  .+..+++++.
T Consensus        29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~   68 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE   68 (128)
T ss_pred             HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence            78999999999   899999999999 5  7878888764

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=96.28  E-value=0.0043  Score=48.18  Aligned_cols=37  Identities=14%  Similarity=0.040  Sum_probs=33.1

Q ss_pred             CCCCCCCHHHHHH--hCCCcEEEEcCcH--HHHHHHHHHhH
Q 029420          137 ANRFYPGIPDALK--FASSRIYIVTTKA--VSQMLYYESLQ  173 (193)
Q Consensus       137 ~~~lypGV~e~L~--~~gi~laVvTnK~--~a~~lL~~~~~  173 (193)
                      ..++|||+.++|+  .++++++|+||++  .++.+++++..
T Consensus        43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~l~~   83 (148)
T smart00577       43 YVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDLLDP   83 (148)
T ss_pred             EEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHHhCc
Confidence            4678999999999  7789999999999  99999998854

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=96.21  E-value=0.0032  Score=51.37  Aligned_cols=30  Identities=30%  Similarity=0.365  Sum_probs=23.6

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .|+|+||+||||+|+-..+......+++++
T Consensus         1 ik~v~~DlDGTLl~~~~~i~~~~~~~i~~l   30 (215)
T TIGR01487         1 IKLVAIDIDGTLTEPNRMISERAIEAIRKA   30 (215)
T ss_pred             CcEEEEecCCCcCCCCcccCHHHHHHHHHH
Confidence            378999999999998766666666666666

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=96.12  E-value=0.0027  Score=51.68  Aligned_cols=27  Identities=33%  Similarity=0.351  Sum_probs=21.7

Q ss_pred             EEEecCcccccChHHHHHHHHHHHHHh
Q 029420            5 YALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         5 vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      |+|||||||+|+-..+......+++++
T Consensus         1 i~~DlDGTLl~~~~~i~~~~~~al~~l   27 (225)
T TIGR01482         1 IASDIDGTLTDPNRAINESALEAIRKA   27 (225)
T ss_pred             CeEeccCccCCCCcccCHHHHHHHHHH
Confidence            689999999999777777666677664

catalyze the same reaction as SPP.

>PLN02423 phosphomannomutase

Probab=95.94  E-value=0.0043  Score=52.29  Aligned_cols=29  Identities=21%  Similarity=0.202  Sum_probs=23.8

Q ss_pred             ceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            3 DLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .+++||+||||+|+-..+-.....+++++
T Consensus         8 ~i~~~D~DGTLl~~~~~i~~~~~~ai~~l   36 (245)
T PLN02423          8 VIALFDVDGTLTAPRKEATPEMLEFMKEL   36 (245)
T ss_pred             eEEEEeccCCCcCCCCcCCHHHHHHHHHH
Confidence            45669999999999887877777777777

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=95.86  E-value=0.0088  Score=49.95  Aligned_cols=37  Identities=19%  Similarity=0.270  Sum_probs=31.0

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHH--HHHHHHhH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQ--MLYYESLQ  173 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~--~lL~~~~~  173 (193)
                      ..++|||+.++|+   ++|++++|+|||+  .+.  ..|++++.
T Consensus        22 ~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl   65 (242)
T TIGR01459        22 GNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGI   65 (242)
T ss_pred             CCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCC
Confidence            4689999999999   8999999999999  444  67787743

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=95.58  E-value=0.075  Score=49.61  Aligned_cols=52  Identities=12%  Similarity=0.098  Sum_probs=35.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHHhCCCcEEEEcCcH--HHHHHHHH
Q 029420          109 SENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKA--VSQMLYYE  170 (193)
Q Consensus       109 g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~~~gi~laVvTnK~--~a~~lL~~  170 (193)
                      |++.+++++...++.+.|...         .++|.+.+.++++|.. +|+|.-+  .++++.+.
T Consensus        89 G~~~~el~~~~r~~l~~f~~~---------~l~~~a~~~~~~~g~~-vvVSASp~~~Vepfa~~  142 (497)
T PLN02177         89 GLKIRDIELVSRSVLPKFYAE---------DVHPETWRVFNSFGKR-YIITASPRIMVEPFVKT  142 (497)
T ss_pred             CCCHHHHHHHHHHHHHHHHHH---------hcCHHHHHHHHhCCCE-EEEECCcHHHHHHHHHH
Confidence            777777766655555554321         3778788777766654 8888877  78888865

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=95.44  E-value=0.016  Score=51.85  Aligned_cols=27  Identities=30%  Similarity=0.420  Sum_probs=24.4

Q ss_pred             ccCCCCCCCHHHHHH---hCCCcEEEEcCc
Q 029420          135 IGANRFYPGIPDALK---FASSRIYIVTTK  161 (193)
Q Consensus       135 ~~~~~lypGV~e~L~---~~gi~laVvTnK  161 (193)
                      ....++||||.++|+   ++|++++|+|||
T Consensus        26 ~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq   55 (354)
T PRK05446         26 LDKLAFEPGVIPALLKLQKAGYKLVMVTNQ   55 (354)
T ss_pred             cccceECcCHHHHHHHHHhCCCeEEEEECC
Confidence            445799999999999   889999999997

>PLN02887 hydrolase family protein

Probab=95.44  E-value=0.0095  Score=56.53  Aligned_cols=31  Identities=29%  Similarity=0.218  Sum_probs=24.7

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      |.|+|+||+||||+|+-..+......+++++
T Consensus       307 ~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl  337 (580)
T PLN02887        307 KFSYIFCDMDGTLLNSKSQISETNAKALKEA  337 (580)
T ss_pred             CccEEEEeCCCCCCCCCCccCHHHHHHHHHH
Confidence            5689999999999998766766666666665

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=95.43  E-value=0.0085  Score=46.00  Aligned_cols=14  Identities=14%  Similarity=0.306  Sum_probs=12.9

Q ss_pred             ceEEEecCcccccC
Q 029420            3 DLYALDFDGVLCDS   16 (193)
Q Consensus         3 ~~vlFDlDGTLvDS   16 (193)
                      |+|+||+||||++.
T Consensus         2 K~i~~DiDGTL~~~   15 (126)
T TIGR01689         2 KRLVMDLDNTITLT   15 (126)
T ss_pred             CEEEEeCCCCcccC
Confidence            79999999999975

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=95.42  E-value=0.019  Score=48.20  Aligned_cols=25  Identities=12%  Similarity=0.329  Sum_probs=23.0

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      ..+.||+.++++   ++|+++..+||.+
T Consensus       114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~  141 (229)
T PF03767_consen  114 APAIPGALELYNYARSRGVKVFFITGRP  141 (229)
T ss_dssp             GEEETTHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             CcccHHHHHHHHHHHHCCCeEEEEecCC
Confidence            378899999999   9999999999988

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>PRK06769 hypothetical protein; Validated

Probab=95.35  E-value=0.011  Score=47.07  Aligned_cols=25  Identities=16%  Similarity=0.289  Sum_probs=23.2

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      .++||||.++|+   ++|++++|+|||+
T Consensus        27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~   54 (173)
T PRK06769         27 FTLFPFTKASLQKLKANHIKIFSFTNQP   54 (173)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEECCc
Confidence            478999999999   8899999999997

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=95.32  E-value=0.0082  Score=48.57  Aligned_cols=27  Identities=33%  Similarity=0.346  Sum_probs=21.0

Q ss_pred             EEEecCcccccChHHHHHHHHHHHHHh
Q 029420            5 YALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         5 vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      |+|||||||+++-..+......+++.+
T Consensus         1 i~~DlDGTLl~~~~~i~~~~~~al~~l   27 (254)
T PF08282_consen    1 IFSDLDGTLLNSDGKISPETIEALKEL   27 (254)
T ss_dssp             EEEECCTTTCSTTSSSCHHHHHHHHHH
T ss_pred             cEEEECCceecCCCeeCHHHHHHHHhh
Confidence            689999999998766666666666655

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=95.31  E-value=0.011  Score=50.18  Aligned_cols=30  Identities=27%  Similarity=0.083  Sum_probs=21.4

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .++|++|+||||+|+-..+......+++++
T Consensus         7 ~~lI~~DlDGTLL~~~~~i~~~~~~ai~~l   36 (271)
T PRK03669          7 PLLIFTDLDGTLLDSHTYDWQPAAPWLTRL   36 (271)
T ss_pred             CeEEEEeCccCCcCCCCcCcHHHHHHHHHH
Confidence            378999999999998554544455555554

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=95.28  E-value=0.0086  Score=46.27  Aligned_cols=25  Identities=28%  Similarity=0.345  Sum_probs=23.2

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      .++|||+.++|+   ++|++++|+||++
T Consensus        26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~   53 (147)
T TIGR01656        26 WQLRPGAVPALLTLRAAGYTVVVVTNQS   53 (147)
T ss_pred             eEEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence            479999999999   8999999999976

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=95.10  E-value=0.013  Score=51.25  Aligned_cols=29  Identities=28%  Similarity=0.088  Sum_probs=21.8

Q ss_pred             ceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            3 DLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      |+|++||||||.|+-..+...+..+++.+
T Consensus         2 KLIftDLDGTLLd~~~~~~~~a~~aL~~L   30 (302)
T PRK12702          2 RLVLSSLDGSLLDLEFNSYGAARQALAAL   30 (302)
T ss_pred             cEEEEeCCCCCcCCCCcCCHHHHHHHHHH
Confidence            78999999999996665555555555555

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=95.03  E-value=0.028  Score=42.62  Aligned_cols=14  Identities=21%  Similarity=0.451  Sum_probs=13.2

Q ss_pred             ceEEEecCcccccC
Q 029420            3 DLYALDFDGVLCDS   16 (193)
Q Consensus         3 ~~vlFDlDGTLvDS   16 (193)
                      |+++|||||||.+.
T Consensus         1 kli~~DlD~Tl~~~   14 (128)
T TIGR01681         1 KVIVFDLDNTLWTG   14 (128)
T ss_pred             CEEEEeCCCCCCCC
Confidence            68999999999998

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=95.03  E-value=0.013  Score=49.03  Aligned_cols=28  Identities=29%  Similarity=0.235  Sum_probs=20.1

Q ss_pred             eEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            4 LYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         4 ~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      +|+||+||||+|+-..+......+++++
T Consensus         1 li~~DlDGTLl~~~~~i~~~~~~~i~~l   28 (256)
T TIGR00099         1 LIFIDLDGTLLNDDHTISPSTKEALAKL   28 (256)
T ss_pred             CEEEeCCCCCCCCCCccCHHHHHHHHHH
Confidence            5899999999998655555555555554

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=94.82  E-value=0.034  Score=47.55  Aligned_cols=37  Identities=16%  Similarity=0.102  Sum_probs=32.7

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHhH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESLQ  173 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~~  173 (193)
                      ...+|||+.++|+   ++|++++|+|||+  .++.+++++..
T Consensus       185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~  226 (300)
T PHA02530        185 EDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQ  226 (300)
T ss_pred             cCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHH
Confidence            3579999999999   8899999999999  88889988844

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=94.74  E-value=0.016  Score=46.65  Aligned_cols=28  Identities=32%  Similarity=0.368  Sum_probs=19.4

Q ss_pred             eEEEecCcccccCh-HHHHHHHHHHHHHh
Q 029420            4 LYALDFDGVLCDSC-GESSLSAVKAAKVR   31 (193)
Q Consensus         4 ~vlFDlDGTLvDS~-~di~~a~~~al~~l   31 (193)
                      +|+||+||||+++- ..+...+..+++++
T Consensus         1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l   29 (204)
T TIGR01484         1 LLFFDLDGTLLDPNAHELSPETIEALERL   29 (204)
T ss_pred             CEEEeCcCCCcCCCCCcCCHHHHHHHHHH
Confidence            58999999999875 33444555555555

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=94.50  E-value=0.35  Score=40.19  Aligned_cols=39  Identities=10%  Similarity=0.177  Sum_probs=33.6

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHhHHH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESLQEL  175 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~~~~  175 (193)
                      ..++=|||+++..   ++|.+++++|.--  ++..+-..++.+.
T Consensus        86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~  129 (227)
T KOG1615|consen   86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPK  129 (227)
T ss_pred             CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcH
Confidence            4678899999998   9999999999988  8888888886554

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=94.18  E-value=0.019  Score=41.52  Aligned_cols=15  Identities=40%  Similarity=0.474  Sum_probs=13.4

Q ss_pred             eEEEecCcccccChH
Q 029420            4 LYALDFDGVLCDSCG   18 (193)
Q Consensus         4 ~vlFDlDGTLvDS~~   18 (193)
                      +++||+||||+++-+
T Consensus         1 ~~vfD~D~tl~~~~~   15 (139)
T cd01427           1 AVLFDLDGTLLDSEP   15 (139)
T ss_pred             CeEEccCCceEccCc
Confidence            489999999999885

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=94.17  E-value=0.19  Score=43.50  Aligned_cols=64  Identities=8%  Similarity=0.161  Sum_probs=44.5

Q ss_pred             hhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHH
Q 029420           94 LENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLY  168 (193)
Q Consensus        94 ~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL  168 (193)
                      +..|=....+++..++++.+.+++.++.              ...++.||+.++++   ++|++++|+|+-.  .++.+|
T Consensus        90 m~eWw~k~~~l~~~~~~~~e~i~~~v~~--------------~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL  155 (277)
T TIGR01544        90 MVEWWTKSHGLLVQQAFPKAKIKEIVAE--------------SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVL  155 (277)
T ss_pred             HHHHHHHHHHHHhcCCCCHHHHHHHHhh--------------cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHH
Confidence            3344344455555556666544332220              14678999999999   8999999999988  899999


Q ss_pred             HHH
Q 029420          169 YES  171 (193)
Q Consensus       169 ~~~  171 (193)
                      +++
T Consensus       156 ~~l  158 (277)
T TIGR01544       156 RQA  158 (277)
T ss_pred             HHc
Confidence            875

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>TIGR01684 viral_ppase viral phosphatase

Probab=94.17  E-value=0.033  Score=48.71  Aligned_cols=30  Identities=10%  Similarity=0.068  Sum_probs=21.4

Q ss_pred             CceEEEecCcccccChHHH---HHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGES---SLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di---~~a~~~al~~l   31 (193)
                      .++|+|||||||.+.-..+   -..+..+++++
T Consensus       126 ~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~L  158 (301)
T TIGR01684       126 PHVVVFDLDSTLITDEEPVRIRDPRIYDSLTEL  158 (301)
T ss_pred             ceEEEEecCCCCcCCCCccccCCHHHHHHHHHH
Confidence            4789999999999986543   24455555555

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>TIGR01686 FkbH FkbH-like domain

Probab=94.13  E-value=0.035  Score=48.51  Aligned_cols=34  Identities=3%  Similarity=0.083  Sum_probs=31.0

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYE  170 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~  170 (193)
                      ...+|||+.++|+   ++|++++|||||+  .+..++++
T Consensus        29 ~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~   67 (320)
T TIGR01686        29 LSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER   67 (320)
T ss_pred             cCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence            4568999999999   8999999999999  89999987

The C-terminal portion of this domain is unique to this family (by BLAST).

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=94.06  E-value=0.024  Score=45.54  Aligned_cols=15  Identities=40%  Similarity=0.607  Sum_probs=13.8

Q ss_pred             CceEEEecCcccccC
Q 029420            2 ADLYALDFDGVLCDS   16 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS   16 (193)
                      .|+|+||+||||+|+
T Consensus        21 ikli~~D~Dgtl~~~   35 (183)
T PRK09484         21 IRLLICDVDGVFSDG   35 (183)
T ss_pred             ceEEEEcCCeeeecC
Confidence            579999999999996

>smart00775 LNS2 LNS2 domain

Probab=94.05  E-value=0.029  Score=44.26  Aligned_cols=14  Identities=29%  Similarity=0.420  Sum_probs=12.6

Q ss_pred             eEEEecCcccccCh
Q 029420            4 LYALDFDGVLCDSC   17 (193)
Q Consensus         4 ~vlFDlDGTLvDS~   17 (193)
                      +|+||+||||++|-
T Consensus         1 iVisDIDGTL~~sd   14 (157)
T smart00775        1 IVISDIDGTITKSD   14 (157)
T ss_pred             CEEEecCCCCcccc
Confidence            58999999999985

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=93.89  E-value=0.041  Score=48.14  Aligned_cols=27  Identities=30%  Similarity=0.290  Sum_probs=21.0

Q ss_pred             eEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            4 LYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         4 ~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      +++||+||||+++-.- ...+..+++.+
T Consensus         2 ~~ifD~DGvL~~g~~~-i~ga~eal~~L   28 (321)
T TIGR01456         2 GFAFDIDGVLFRGKKP-IAGASDALRRL   28 (321)
T ss_pred             EEEEeCcCceECCccc-cHHHHHHHHHH
Confidence            5899999999999876 55555666666

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=93.87  E-value=0.067  Score=42.46  Aligned_cols=34  Identities=24%  Similarity=0.374  Sum_probs=28.1

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH---HHHHHHHHH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA---VSQMLYYES  171 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~---~a~~lL~~~  171 (193)
                      ..+|||+.++|+   ++|++++|+||++   .+..+++++
T Consensus        42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~   81 (170)
T TIGR01668        42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKAL   81 (170)
T ss_pred             CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHc
Confidence            479999999999   8899999999987   555555554

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=93.76  E-value=0.24  Score=42.86  Aligned_cols=26  Identities=8%  Similarity=0.075  Sum_probs=23.4

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      ..++.||+.++.+   +.|+++.++||.+
T Consensus       143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~  171 (275)
T TIGR01680       143 EAPALPETLKNYNKLVSLGFKIIFLSGRL  171 (275)
T ss_pred             cCCCChHHHHHHHHHHHCCCEEEEEeCCc
Confidence            5678899999998   8999999999998

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=93.70  E-value=0.49  Score=39.02  Aligned_cols=36  Identities=11%  Similarity=0.157  Sum_probs=31.4

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      ..++=||..+..+   +++++..|+|+-.  +..++++.+.
T Consensus        71 ~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~iv  111 (220)
T COG4359          71 DIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIV  111 (220)
T ss_pred             hcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhc
Confidence            3578899999999   9999999999977  9999988874

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=93.62  E-value=0.041  Score=44.81  Aligned_cols=14  Identities=43%  Similarity=0.475  Sum_probs=12.3

Q ss_pred             eEEEecCcccccCh
Q 029420            4 LYALDFDGVLCDSC   17 (193)
Q Consensus         4 ~vlFDlDGTLvDS~   17 (193)
                      +|++|+||||.|+-
T Consensus         1 ~i~~DlDGTLL~~~   14 (221)
T TIGR02463         1 WVFSDLDGTLLDSH   14 (221)
T ss_pred             CEEEeCCCCCcCCC
Confidence            48999999999974

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=93.59  E-value=0.046  Score=47.84  Aligned_cols=30  Identities=10%  Similarity=0.058  Sum_probs=21.1

Q ss_pred             CceEEEecCcccccChHHH---HHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGES---SLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di---~~a~~~al~~l   31 (193)
                      .++|+||+||||+++-.++   -..+..+++++
T Consensus       128 ~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eL  160 (303)
T PHA03398        128 PHVIVFDLDSTLITDEEPVRIRDPFVYDSLDEL  160 (303)
T ss_pred             ccEEEEecCCCccCCCCccccCChhHHHHHHHH
Confidence            4789999999999996655   23344444444

>TIGR01675 plant-AP plant acid phosphatase

Probab=93.48  E-value=0.26  Score=41.60  Aligned_cols=26  Identities=12%  Similarity=0.119  Sum_probs=23.7

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      ...+.||+.++++   ++|+++.++|+.+
T Consensus       118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~  146 (229)
T TIGR01675       118 AAPALPEGLKLYQKIIELGIKIFLLSGRW  146 (229)
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEcCCC
Confidence            4678999999998   8999999999998

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=93.47  E-value=0.031  Score=43.42  Aligned_cols=16  Identities=38%  Similarity=0.592  Sum_probs=13.3

Q ss_pred             ceEEEecCcccccChH
Q 029420            3 DLYALDFDGVLCDSCG   18 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~   18 (193)
                      |+++|||||||+++..
T Consensus         1 k~LVlDLD~TLv~~~~   16 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSS   16 (159)
T ss_dssp             EEEEEE-CTTTEEEES
T ss_pred             CEEEEeCCCcEEEEee
Confidence            5799999999999875

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=93.43  E-value=0.041  Score=42.42  Aligned_cols=16  Identities=31%  Similarity=0.343  Sum_probs=14.3

Q ss_pred             ceEEEecCcccccChH
Q 029420            3 DLYALDFDGVLCDSCG   18 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~   18 (193)
                      ++++||+||||.++-.
T Consensus         1 ~~~~~d~dgtl~~~~~   16 (147)
T TIGR01656         1 PALFLDRDGVINEDTV   16 (147)
T ss_pred             CeEEEeCCCceeccCC
Confidence            5799999999999885

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=93.43  E-value=0.039  Score=45.87  Aligned_cols=27  Identities=22%  Similarity=0.103  Sum_probs=17.1

Q ss_pred             eEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            4 LYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         4 ~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      +|+||+||||.|+-. +......+++++
T Consensus         1 li~~DlDGTLl~~~~-~~~~~~~ai~~l   27 (225)
T TIGR02461         1 VIFTDLDGTLLPPGY-EPGPAREALEEL   27 (225)
T ss_pred             CEEEeCCCCCcCCCC-CchHHHHHHHHH
Confidence            589999999998432 233344444444

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=93.40  E-value=0.11  Score=41.93  Aligned_cols=37  Identities=14%  Similarity=0.253  Sum_probs=26.5

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEc--CcH-HHHHHHHHHhH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVT--TKA-VSQMLYYESLQ  173 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvT--nK~-~a~~lL~~~~~  173 (193)
                      ..++||+|.+.|+   ++|+++||||  +-| -|+.+|+.+.-
T Consensus        43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i   85 (169)
T PF12689_consen   43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEI   85 (169)
T ss_dssp             EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-
T ss_pred             EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCC
Confidence            3589999999999   8999999998  456 99999998843

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=93.29  E-value=0.045  Score=43.51  Aligned_cols=16  Identities=31%  Similarity=0.538  Sum_probs=14.1

Q ss_pred             CceEEEecCcccccCh
Q 029420            2 ADLYALDFDGVLCDSC   17 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~   17 (193)
                      .|+++||+||||+++-
T Consensus        13 ~k~~~~D~Dgtl~~~~   28 (166)
T TIGR01664        13 SKVAAFDLDGTLITTR   28 (166)
T ss_pred             CcEEEEeCCCceEecC
Confidence            6899999999999854

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=93.21  E-value=0.11  Score=37.98  Aligned_cols=26  Identities=23%  Similarity=0.337  Sum_probs=22.2

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      ..+++||+.++|+   ++|+++.++||.+
T Consensus        12 g~~~ipga~e~l~~L~~~g~~~~~lTNns   40 (101)
T PF13344_consen   12 GNEPIPGAVEALDALRERGKPVVFLTNNS   40 (101)
T ss_dssp             TTEE-TTHHHHHHHHHHTTSEEEEEES-S
T ss_pred             CCCcCcCHHHHHHHHHHcCCCEEEEeCCC
Confidence            4679999999999   8999999999998

...

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=93.20  E-value=0.048  Score=45.70  Aligned_cols=15  Identities=40%  Similarity=0.576  Sum_probs=13.2

Q ss_pred             eEEEecCcccccChH
Q 029420            4 LYALDFDGVLCDSCG   18 (193)
Q Consensus         4 ~vlFDlDGTLvDS~~   18 (193)
                      +|+||+||||+|+-.
T Consensus         1 li~~DlDGTll~~~~   15 (256)
T TIGR01486         1 WIFTDLDGTLLDPHG   15 (256)
T ss_pred             CEEEcCCCCCcCCCC
Confidence            589999999999865

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>PRK10444 UMP phosphatase; Provisional

Probab=92.99  E-value=0.082  Score=44.76  Aligned_cols=23  Identities=22%  Similarity=0.157  Sum_probs=17.1

Q ss_pred             CceEEEecCcccccC---hHHHHHHH
Q 029420            2 ADLYALDFDGVLCDS---CGESSLSA   24 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS---~~di~~a~   24 (193)
                      .++|+||+||||.++   .|....+.
T Consensus         1 ~~~v~~DlDGtL~~~~~~~p~a~~~l   26 (248)
T PRK10444          1 IKNVICDIDGVLMHDNVAVPGAAEFL   26 (248)
T ss_pred             CcEEEEeCCCceEeCCeeCccHHHHH
Confidence            478999999999999   44444333

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=92.92  E-value=0.046  Score=42.68  Aligned_cols=15  Identities=53%  Similarity=0.760  Sum_probs=13.3

Q ss_pred             CceEEEecCcccccC
Q 029420            2 ADLYALDFDGVLCDS   16 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS   16 (193)
                      .|+|+||+||||+|.
T Consensus         1 ~~~~~~D~Dgtl~~~   15 (154)
T TIGR01670         1 IRLLILDVDGVLTDG   15 (154)
T ss_pred             CeEEEEeCceeEEcC
Confidence            378999999999994

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=92.73  E-value=0.07  Score=45.51  Aligned_cols=14  Identities=29%  Similarity=0.553  Sum_probs=12.3

Q ss_pred             ceEEEecCcccccC
Q 029420            3 DLYALDFDGVLCDS   16 (193)
Q Consensus         3 ~~vlFDlDGTLvDS   16 (193)
                      .+|+||+||||++.
T Consensus        15 ~li~~D~DGTLl~~   28 (266)
T PRK10187         15 YAWFFDLDGTLAEI   28 (266)
T ss_pred             EEEEEecCCCCCCC
Confidence            48999999999983

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=92.66  E-value=0.19  Score=36.09  Aligned_cols=35  Identities=29%  Similarity=0.385  Sum_probs=30.7

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ..+++||+.++|+   ++|++++|+||..  .++..++.+
T Consensus        22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~   61 (139)
T cd01427          22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEEL   61 (139)
T ss_pred             cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHc
Confidence            4689999999999   7899999999988  888888775

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=92.39  E-value=0.11  Score=48.73  Aligned_cols=39  Identities=13%  Similarity=0.123  Sum_probs=34.5

Q ss_pred             ccCCCCCCCHHHHHH---hCCC-cEEEEcCcH--HHHHHHHHHhH
Q 029420          135 IGANRFYPGIPDALK---FASS-RIYIVTTKA--VSQMLYYESLQ  173 (193)
Q Consensus       135 ~~~~~lypGV~e~L~---~~gi-~laVvTnK~--~a~~lL~~~~~  173 (193)
                      ....++|||+.++|+   ++|+ +++|+||++  .++.++++++-
T Consensus       358 ~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi  402 (536)
T TIGR01512       358 LLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGI  402 (536)
T ss_pred             EEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCC
Confidence            345689999999999   8999 999999999  99999999854

.

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=92.25  E-value=0.12  Score=45.34  Aligned_cols=33  Identities=12%  Similarity=-0.044  Sum_probs=29.0

Q ss_pred             CCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHhH
Q 029420          141 YPGIPDALK---FASSRIYIVTTKA--VSQMLYYESLQ  173 (193)
Q Consensus       141 ypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~~  173 (193)
                      =|||.++|+   ++|++++|+|||+  .+..+|++++-
T Consensus       150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL  187 (303)
T PHA03398        150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKL  187 (303)
T ss_pred             ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCC
Confidence            499999999   8999999999997  88889988743

>PLN02645 phosphoglycolate phosphatase

Probab=92.20  E-value=0.088  Score=45.82  Aligned_cols=59  Identities=17%  Similarity=0.280  Sum_probs=40.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          112 RDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       112 ~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      .+++.+.++.|+-.+.+.+..-|. ...+|||+.++|+   ++|+++.++||++  ..+.+++.+
T Consensus        18 ~~~~~~~~~~~~~~~~D~DGtl~~-~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l   81 (311)
T PLN02645         18 LENADELIDSVETFIFDCDGVIWK-GDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKF   81 (311)
T ss_pred             HHHHHHHHHhCCEEEEeCcCCeEe-CCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHH
Confidence            444555555555555554444443 3479999999998   8999999999988  555555443

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=92.03  E-value=0.078  Score=41.94  Aligned_cols=16  Identities=25%  Similarity=0.445  Sum_probs=11.8

Q ss_pred             ceEEEecCcccccChH
Q 029420            3 DLYALDFDGVLCDSCG   18 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~   18 (193)
                      |+++||+||||+-+-.
T Consensus         1 Kia~fD~DgTLi~~~s   16 (159)
T PF08645_consen    1 KIAFFDLDGTLIKTKS   16 (159)
T ss_dssp             SEEEE-SCTTTEE-ST
T ss_pred             CEEEEeCCCCccCCCC
Confidence            6889999999987654

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=91.87  E-value=0.17  Score=40.05  Aligned_cols=36  Identities=11%  Similarity=-0.043  Sum_probs=31.4

Q ss_pred             CCCCCHHHHHH--hCCCcEEEEcCcH--HHHHHHHHHhHH
Q 029420          139 RFYPGIPDALK--FASSRIYIVTTKA--VSQMLYYESLQE  174 (193)
Q Consensus       139 ~lypGV~e~L~--~~gi~laVvTnK~--~a~~lL~~~~~~  174 (193)
                      +.=||+.++|+  .+.+.++|.|+++  .|+++++++.+.
T Consensus        42 ~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp~   81 (162)
T TIGR02251        42 FKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDRG   81 (162)
T ss_pred             EECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCcC
Confidence            45599999999  5569999999999  999999998754

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=91.77  E-value=0.085  Score=42.29  Aligned_cols=15  Identities=47%  Similarity=0.727  Sum_probs=13.9

Q ss_pred             CceEEEecCcccccC
Q 029420            2 ADLYALDFDGVLCDS   16 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS   16 (193)
                      .|+++||+||||.|.
T Consensus         7 i~~~v~d~dGv~tdg   21 (169)
T TIGR02726         7 IKLVILDVDGVMTDG   21 (169)
T ss_pred             CeEEEEeCceeeECC
Confidence            479999999999998

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=91.61  E-value=0.17  Score=41.78  Aligned_cols=25  Identities=16%  Similarity=0.096  Sum_probs=18.8

Q ss_pred             eEEEecCcccccChHHHHHHHHHHHH
Q 029420            4 LYALDFDGVLCDSCGESSLSAVKAAK   29 (193)
Q Consensus         4 ~vlFDlDGTLvDS~~di~~a~~~al~   29 (193)
                      +|++||||||.|+-..+.... .+++
T Consensus         1 li~~DlDgTLl~~~~~~~~~~-~~~~   25 (236)
T TIGR02471         1 LIITDLDNTLLGDDEGLASFV-ELLR   25 (236)
T ss_pred             CeEEeccccccCCHHHHHHHH-HHHH
Confidence            588999999999977665544 5554

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=91.54  E-value=0.12  Score=50.00  Aligned_cols=30  Identities=23%  Similarity=0.268  Sum_probs=19.4

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .|+|++|+||||+|+-..+......+++.+
T Consensus       416 ~KLIfsDLDGTLLd~d~~i~~~t~eAL~~L  445 (694)
T PRK14502        416 KKIVYTDLDGTLLNPLTYSYSTALDALRLL  445 (694)
T ss_pred             eeEEEEECcCCCcCCCCccCHHHHHHHHHH
Confidence            378999999999996433333333444444

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=91.43  E-value=0.18  Score=47.41  Aligned_cols=38  Identities=13%  Similarity=0.131  Sum_probs=33.8

Q ss_pred             cCCCCCCCHHHHHH---hCC-CcEEEEcCcH--HHHHHHHHHhH
Q 029420          136 GANRFYPGIPDALK---FAS-SRIYIVTTKA--VSQMLYYESLQ  173 (193)
Q Consensus       136 ~~~~lypGV~e~L~---~~g-i~laVvTnK~--~a~~lL~~~~~  173 (193)
                      ....+|||+.++|+   ++| ++++|+|||+  .++.++++++.
T Consensus       381 ~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi  424 (556)
T TIGR01525       381 LRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGI  424 (556)
T ss_pred             ecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCC
Confidence            34689999999999   889 9999999999  99999999843

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR01684 viral_ppase viral phosphatase

Probab=91.31  E-value=0.17  Score=44.34  Aligned_cols=32  Identities=13%  Similarity=-0.035  Sum_probs=28.5

Q ss_pred             CCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          141 YPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       141 ypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      =||+.++|+   ++|++++|+||++  .+...|++++
T Consensus       148 dPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lG  184 (301)
T TIGR01684       148 DPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVK  184 (301)
T ss_pred             CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcC
Confidence            399999999   8999999999998  8888888874

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>TIGR00685 T6PP trehalose-phosphatase

Probab=91.07  E-value=0.091  Score=43.96  Aligned_cols=14  Identities=29%  Similarity=0.700  Sum_probs=12.4

Q ss_pred             ceEEEecCcccccC
Q 029420            3 DLYALDFDGVLCDS   16 (193)
Q Consensus         3 ~~vlFDlDGTLvDS   16 (193)
                      .+++||+||||++.
T Consensus         4 ~~l~lD~DGTL~~~   17 (244)
T TIGR00685         4 RAFFFDYDGTLSEI   17 (244)
T ss_pred             EEEEEecCccccCC
Confidence            57999999999984

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=91.04  E-value=0.24  Score=41.31  Aligned_cols=28  Identities=21%  Similarity=0.208  Sum_probs=19.3

Q ss_pred             eEEEecCccccc---ChHHHHHHHHHHHHHh
Q 029420            4 LYALDFDGVLCD---SCGESSLSAVKAAKVR   31 (193)
Q Consensus         4 ~vlFDlDGTLvD---S~~di~~a~~~al~~l   31 (193)
                      +|+.||||||+|   +-..+..-...+++++
T Consensus         3 li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~   33 (249)
T TIGR01485         3 LLVSDLDNTLVDHTDGDNQALLRLNALLEDH   33 (249)
T ss_pred             EEEEcCCCcCcCCCCCChHHHHHHHHHHHHh
Confidence            678899999997   4455555555555554

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=90.90  E-value=0.17  Score=42.78  Aligned_cols=25  Identities=16%  Similarity=0.181  Sum_probs=20.9

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      +-.|+++.++++   +.+++++|+|||+
T Consensus       119 ~~~y~~l~~a~~~L~~~~~~~~iatn~~  146 (257)
T TIGR01458       119 HFSYQILNQAFRLLLDGAKPLLIAIGKG  146 (257)
T ss_pred             ccCHHHHHHHHHHHHcCCCCEEEEeCCC
Confidence            345889999888   6788999999998

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>PLN02499 glycerol-3-phosphate acyltransferase

Probab=90.73  E-value=1.5  Score=41.01  Aligned_cols=53  Identities=8%  Similarity=-0.001  Sum_probs=31.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHHhCCCcEEEEcCcH--HHHHHHHHH
Q 029420          109 SENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       109 g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      |+..+++++.-.++-..|   |.+...      |...+...+.| +.+|+|.-|  ++++.++.+
T Consensus        75 Gl~~~die~vaRavlpkf---~~~dv~------~e~~~~~~~~g-~~vVVTAsPrvmVEpFake~  129 (498)
T PLN02499         75 GVHESEIESVARAVLPKF---YMDDVD------MEAWKVFSSCD-KRVVVTRMPRVMVERFAKEH  129 (498)
T ss_pred             CCCHHHHHHHHHHHhhHH---HHhhCC------HHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHh
Confidence            666766655555454443   222211      22333333666 899999888  888888874

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=90.24  E-value=0.14  Score=43.76  Aligned_cols=24  Identities=13%  Similarity=0.289  Sum_probs=20.1

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      .--|||+.++|+   ++|+ ++|+|||+
T Consensus       142 ~~~y~~i~~~l~~L~~~g~-~~i~Tn~d  168 (279)
T TIGR01452       142 HFSYAKLREACAHLREPGC-LFVATNRD  168 (279)
T ss_pred             CCCHHHHHHHHHHHhcCCC-EEEEeCCC
Confidence            345999999999   5676 89999998

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=90.09  E-value=0.14  Score=43.07  Aligned_cols=29  Identities=17%  Similarity=0.140  Sum_probs=20.4

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .|.++||+||||.++-..+-. +..+++.+
T Consensus         1 ~~~~~~D~DGtl~~~~~~i~~-a~~~l~~l   29 (249)
T TIGR01457         1 YKGYLIDLDGTMYKGKERIPE-AETFVHEL   29 (249)
T ss_pred             CCEEEEeCCCceEcCCeeCcC-HHHHHHHH
Confidence            378999999999998765543 33444444

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=89.91  E-value=0.41  Score=38.99  Aligned_cols=48  Identities=23%  Similarity=0.252  Sum_probs=35.4

Q ss_pred             CCCCCHHHHHH---hCCCcEEEEcCcH-HHHHHHHHHhHHHHHHHHHHHHHHHHh
Q 029420          139 RFYPGIPDALK---FASSRIYIVTTKA-VSQMLYYESLQELQYHLTEFMVWELVQ  189 (193)
Q Consensus       139 ~lypGV~e~L~---~~gi~laVvTnK~-~a~~lL~~~~~~~~~~~~~~~~~~~~~  189 (193)
                      .+.||+.+.|.   +.|++++|+||+. .++.-   |-+.-+..++++|.|.|-+
T Consensus        31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgy---f~~~~f~~~~~~m~~~l~~   82 (181)
T COG0241          31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGY---FTEADFDKLHNKMLKILAS   82 (181)
T ss_pred             ccCccHHHHHHHHHhCCCeEEEEECCCCccccC---ccHHHHHHHHHHHHHHHHH
Confidence            67899999999   9999999999998 33322   2334455667778777654

>PLN02645 phosphoglycolate phosphatase

Probab=89.64  E-value=0.19  Score=43.79  Aligned_cols=29  Identities=14%  Similarity=0.201  Sum_probs=19.3

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .|+++||+||||.++-. ....+-.+++.+
T Consensus        28 ~~~~~~D~DGtl~~~~~-~~~ga~e~l~~l   56 (311)
T PLN02645         28 VETFIFDCDGVIWKGDK-LIEGVPETLDML   56 (311)
T ss_pred             CCEEEEeCcCCeEeCCc-cCcCHHHHHHHH
Confidence            37899999999999653 334344444433

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=89.62  E-value=0.18  Score=40.40  Aligned_cols=17  Identities=47%  Similarity=0.589  Sum_probs=15.2

Q ss_pred             CCceEEEecCcccccCh
Q 029420            1 MADLYALDFDGVLCDSC   17 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~   17 (193)
                      |.|+++||.||||.|..
T Consensus         7 ~IkLli~DVDGvLTDG~   23 (170)
T COG1778           7 NIKLLILDVDGVLTDGK   23 (170)
T ss_pred             hceEEEEeccceeecCe
Confidence            46899999999999986

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=89.55  E-value=0.2  Score=40.36  Aligned_cols=14  Identities=29%  Similarity=0.370  Sum_probs=10.6

Q ss_pred             CceEEEecCccccc
Q 029420            2 ADLYALDFDGVLCD   15 (193)
Q Consensus         2 ~~~vlFDlDGTLvD   15 (193)
                      .++|+||||+||-+
T Consensus         3 PklvvFDLD~TlW~   16 (169)
T PF12689_consen    3 PKLVVFDLDYTLWP   16 (169)
T ss_dssp             -SEEEE-STTTSSS
T ss_pred             CcEEEEcCcCCCCc
Confidence            58999999999854

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=89.32  E-value=1.5  Score=36.27  Aligned_cols=42  Identities=24%  Similarity=0.453  Sum_probs=33.7

Q ss_pred             HHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEEcCcH-HHHHHH
Q 029420          126 WMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKA-VSQMLY  168 (193)
Q Consensus       126 y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVvTnK~-~a~~lL  168 (193)
                      |..-|+.+-+ ...+||.+.+.|+   ++|++++|-|+-+ -|++++
T Consensus        91 Wa~Gy~sgel-kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~  136 (229)
T COG4229          91 WAHGYESGEL-KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLF  136 (229)
T ss_pred             HHhccccCcc-ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHh
Confidence            4455666544 4679999999999   9999999999998 777764

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=89.06  E-value=0.21  Score=36.45  Aligned_cols=18  Identities=28%  Similarity=0.455  Sum_probs=13.4

Q ss_pred             EEEecCcccccChHHHHH
Q 029420            5 YALDFDGVLCDSCGESSL   22 (193)
Q Consensus         5 vlFDlDGTLvDS~~di~~   22 (193)
                      ++||+||||.++-.-+-.
T Consensus         1 ~l~D~dGvl~~g~~~ipg   18 (101)
T PF13344_consen    1 FLFDLDGVLYNGNEPIPG   18 (101)
T ss_dssp             EEEESTTTSEETTEE-TT
T ss_pred             CEEeCccEeEeCCCcCcC
Confidence            689999999987654433

...

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=88.71  E-value=0.18  Score=41.98  Aligned_cols=26  Identities=23%  Similarity=0.222  Sum_probs=18.0

Q ss_pred             EEEecCcccccChHHHHHHHHHHHHHh
Q 029420            5 YALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         5 vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      ++||+||||.|+-.-+-.+ ..+++.+
T Consensus         1 ~lfD~DGvL~~~~~~~~~a-~e~i~~l   26 (236)
T TIGR01460         1 FLFDIDGVLWLGHKPIPGA-AEALNRL   26 (236)
T ss_pred             CEEeCcCccCcCCccCcCH-HHHHHHH
Confidence            6899999999997765533 3444333

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=88.67  E-value=0.26  Score=38.13  Aligned_cols=16  Identities=31%  Similarity=0.389  Sum_probs=14.2

Q ss_pred             ceEEEecCcccccChH
Q 029420            3 DLYALDFDGVLCDSCG   18 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~   18 (193)
                      ..+++||||||+++..
T Consensus         3 ~~lvldld~tl~~~~~   18 (148)
T smart00577        3 KTLVLDLDETLVHSTH   18 (148)
T ss_pred             cEEEEeCCCCeECCCC
Confidence            5789999999999864

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=87.16  E-value=0.68  Score=38.98  Aligned_cols=28  Identities=29%  Similarity=0.303  Sum_probs=21.1

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHH
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAK   29 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~   29 (193)
                      ..+++.||||||+|+-+......+..++
T Consensus         2 ~~ll~sDlD~Tl~~~~~~~~~~l~~~l~   29 (247)
T PF05116_consen    2 PRLLASDLDGTLIDGDDEALARLEELLE   29 (247)
T ss_dssp             SEEEEEETBTTTBHCHHHHHHHHHHHHH
T ss_pred             CEEEEEECCCCCcCCCHHHHHHHHHHHH
Confidence            3689999999999776666666655555

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=86.87  E-value=0.72  Score=35.90  Aligned_cols=29  Identities=7%  Similarity=-0.153  Sum_probs=23.4

Q ss_pred             HHHHHHhCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          144 IPDALKFASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       144 V~e~L~~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      +.+.|+++|++++|+|||+  .+..++++++
T Consensus        36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~g   66 (154)
T TIGR01670        36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLG   66 (154)
T ss_pred             HHHHHHHCCCEEEEEECCCCHHHHHHHHHcC
Confidence            3444558999999999999  8888888873

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=86.79  E-value=0.37  Score=38.13  Aligned_cols=14  Identities=29%  Similarity=0.259  Sum_probs=12.3

Q ss_pred             ceEEEecCcccccC
Q 029420            3 DLYALDFDGVLCDS   16 (193)
Q Consensus         3 ~~vlFDlDGTLvDS   16 (193)
                      ++++||.||||+..
T Consensus         2 ~~~~~D~Dgtl~~~   15 (176)
T TIGR00213         2 KAIFLDRDGTINID   15 (176)
T ss_pred             CEEEEeCCCCEeCC
Confidence            78999999999953

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=86.75  E-value=0.64  Score=46.23  Aligned_cols=17  Identities=29%  Similarity=0.487  Sum_probs=14.4

Q ss_pred             CCceEEEecCcccccCh
Q 029420            1 MADLYALDFDGVLCDSC   17 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~   17 (193)
                      |.++|++|+||||++..
T Consensus       595 ~~rlI~LDyDGTLlp~~  611 (854)
T PLN02205        595 TTRAILLDYDGTLMPQA  611 (854)
T ss_pred             cCeEEEEecCCcccCCc
Confidence            46899999999999665

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=86.69  E-value=0.36  Score=39.69  Aligned_cols=15  Identities=40%  Similarity=0.456  Sum_probs=13.4

Q ss_pred             ceEEEecCcccccCh
Q 029420            3 DLYALDFDGVLCDSC   17 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~   17 (193)
                      +++++||||||+|+.
T Consensus        22 klLVLDLDeTLvh~~   36 (195)
T TIGR02245        22 KLLVLDIDYTLFDHR   36 (195)
T ss_pred             cEEEEeCCCceEccc
Confidence            689999999999863

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>PLN03017 trehalose-phosphatase

Probab=86.48  E-value=0.44  Score=42.91  Aligned_cols=12  Identities=42%  Similarity=0.686  Sum_probs=10.6

Q ss_pred             ceEEEecCcccc
Q 029420            3 DLYALDFDGVLC   14 (193)
Q Consensus         3 ~~vlFDlDGTLv   14 (193)
                      .+|+||+||||+
T Consensus       112 ~llflD~DGTL~  123 (366)
T PLN03017        112 IVMFLDYDGTLS  123 (366)
T ss_pred             eEEEEecCCcCc
Confidence            368889999999

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=86.25  E-value=0.65  Score=45.11  Aligned_cols=13  Identities=46%  Similarity=0.792  Sum_probs=12.3

Q ss_pred             ceEEEecCccccc
Q 029420            3 DLYALDFDGVLCD   15 (193)
Q Consensus         3 ~~vlFDlDGTLvD   15 (193)
                      ++|+||+||||++
T Consensus       493 rLi~~D~DGTL~~  505 (726)
T PRK14501        493 RLLLLDYDGTLVP  505 (726)
T ss_pred             eEEEEecCccccC
Confidence            7899999999998

>PLN02151 trehalose-phosphatase

Probab=85.97  E-value=0.48  Score=42.51  Aligned_cols=29  Identities=24%  Similarity=0.210  Sum_probs=17.9

Q ss_pred             ceEEEecCcccc----cChH-HHHHHHHHHHHHh
Q 029420            3 DLYALDFDGVLC----DSCG-ESSLSAVKAAKVR   31 (193)
Q Consensus         3 ~~vlFDlDGTLv----DS~~-di~~a~~~al~~l   31 (193)
                      .+++||+||||+    |.-. .+...+..+++.+
T Consensus        99 ~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~L  132 (354)
T PLN02151         99 IVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKL  132 (354)
T ss_pred             eEEEEecCccCCCCCCCcccccCCHHHHHHHHHH
Confidence            378899999999    3222 2333444555555

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=85.71  E-value=0.37  Score=41.55  Aligned_cols=17  Identities=35%  Similarity=0.567  Sum_probs=14.8

Q ss_pred             CceEEEecCcccccChH
Q 029420            2 ADLYALDFDGVLCDSCG   18 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~   18 (193)
                      .++++||+||||++-.+
T Consensus        18 ~~~~~lDyDGTl~~i~~   34 (266)
T COG1877          18 KRLLFLDYDGTLTEIVP   34 (266)
T ss_pred             ceEEEEecccccccccc
Confidence            36899999999999874

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=85.00  E-value=0.98  Score=39.01  Aligned_cols=31  Identities=29%  Similarity=0.390  Sum_probs=26.7

Q ss_pred             cCCCCCCCHHHHHH---hCCCcEEEEcCcH-HHHH
Q 029420          136 GANRFYPGIPDALK---FASSRIYIVTTKA-VSQM  166 (193)
Q Consensus       136 ~~~~lypGV~e~L~---~~gi~laVvTnK~-~a~~  166 (193)
                      ...++|||+.+.|+   ++|+++..+||.+ .+..
T Consensus        21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~   55 (269)
T COG0647          21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSRE   55 (269)
T ss_pred             eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHH
Confidence            34689999999999   9999999999999 4444

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=84.91  E-value=0.81  Score=43.19  Aligned_cols=38  Identities=8%  Similarity=0.084  Sum_probs=33.4

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHhHH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESLQE  174 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~~~  174 (193)
                      ..+++||+.++|+   ++|++++|+||++  .++.++++++-+
T Consensus       403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~  445 (562)
T TIGR01511       403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN  445 (562)
T ss_pred             cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc
Confidence            4578999999999   8999999999999  999999987543

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=83.66  E-value=0.59  Score=36.93  Aligned_cols=16  Identities=25%  Similarity=0.370  Sum_probs=14.0

Q ss_pred             ceEEEecCcccccChH
Q 029420            3 DLYALDFDGVLCDSCG   18 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~   18 (193)
                      ++++||.||||.++.+
T Consensus         2 ~~~~~d~dg~l~~~~~   17 (161)
T TIGR01261         2 KILFIDRDGTLIEEPP   17 (161)
T ss_pred             CEEEEeCCCCccccCC
Confidence            6899999999999654

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3

Probab=83.04  E-value=0.92  Score=37.55  Aligned_cols=26  Identities=19%  Similarity=0.231  Sum_probs=13.0

Q ss_pred             EEecCcccccChH-----HHHHHHHHHHHHh
Q 029420            6 ALDFDGVLCDSCG-----ESSLSAVKAAKVR   31 (193)
Q Consensus         6 lFDlDGTLvDS~~-----di~~a~~~al~~l   31 (193)
                      +||+||||++-.+     -....+..+|++|
T Consensus         1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~L   31 (235)
T PF02358_consen    1 FLDYDGTLAPIVDDPDAAVPPPELRELLRAL   31 (235)
T ss_dssp             EEE-TTTSS---S-GGG----HHHHHHHHHH
T ss_pred             CcccCCccCCCCCCccccCCCHHHHHHHHHH
Confidence            6999999998775     2223444555555

1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=82.84  E-value=1.2  Score=35.55  Aligned_cols=24  Identities=17%  Similarity=0.123  Sum_probs=21.6

Q ss_pred             HhCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          149 KFASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       149 ~~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      +++|++++|+|||+  .++.+++++.
T Consensus        47 ~~~Gi~laIiT~k~~~~~~~~l~~lg   72 (169)
T TIGR02726        47 QLCGIDVAIITSKKSGAVRHRAEELK   72 (169)
T ss_pred             HHCCCEEEEEECCCcHHHHHHHHHCC
Confidence            38999999999999  8999999983

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=82.23  E-value=0.82  Score=36.03  Aligned_cols=15  Identities=33%  Similarity=0.445  Sum_probs=13.5

Q ss_pred             ceEEEecCcccccCh
Q 029420            3 DLYALDFDGVLCDSC   17 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~   17 (193)
                      +.+++|||+|||-|-
T Consensus         2 ~~lvlDLDeTLi~~~   16 (162)
T TIGR02251         2 KTLVLDLDETLVHST   16 (162)
T ss_pred             cEEEEcCCCCcCCCC
Confidence            579999999999994

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=81.70  E-value=0.9  Score=35.86  Aligned_cols=24  Identities=42%  Similarity=0.706  Sum_probs=20.0

Q ss_pred             CCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          139 RFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       139 ~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      -++|||.+.|+   +.|+.++|+||..
T Consensus        29 ~~~~~v~~~L~~l~~~Gy~IvIvTNQ~   55 (159)
T PF08645_consen   29 FFPPGVPEALRELHKKGYKIVIVTNQS   55 (159)
T ss_dssp             EC-TTHHHHHHHHHHTTEEEEEEEE-C
T ss_pred             hcchhHHHHHHHHHhcCCeEEEEeCcc
Confidence            35579999999   9999999999997

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>COG4996 Predicted phosphatase [General function prediction only]

Probab=81.60  E-value=0.77  Score=35.96  Aligned_cols=16  Identities=25%  Similarity=0.262  Sum_probs=13.3

Q ss_pred             ceEEEecCcccccChH
Q 029420            3 DLYALDFDGVLCDSCG   18 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~   18 (193)
                      ++|+||+||||-|-..
T Consensus         1 ~~i~~d~d~t~wdhh~   16 (164)
T COG4996           1 RAIVFDADKTLWDHHN   16 (164)
T ss_pred             CcEEEeCCCccccccc
Confidence            4799999999998643

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=81.42  E-value=8.1  Score=32.75  Aligned_cols=43  Identities=12%  Similarity=0.050  Sum_probs=31.0

Q ss_pred             CCCCCCHHHHHHhCCC-cEEEEcCcH--HHHHHHHHH-hHHHHHHHH
Q 029420          138 NRFYPGIPDALKFASS-RIYIVTTKA--VSQMLYYES-LQELQYHLT  180 (193)
Q Consensus       138 ~~lypGV~e~L~~~gi-~laVvTnK~--~a~~lL~~~-~~~~~~~~~  180 (193)
                      -+|=|-.+++|-.-.. +..|-||-+  -|.++|+.+ .-+|++-++
T Consensus        99 LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~LGieDcFegii  145 (244)
T KOG3109|consen   99 LKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKKLGIEDCFEGII  145 (244)
T ss_pred             cCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHHhChHHhcccee
Confidence            4566667777762222 278999999  999999999 667776654

>PLN02580 trehalose-phosphatase

Probab=81.02  E-value=0.83  Score=41.42  Aligned_cols=15  Identities=33%  Similarity=0.432  Sum_probs=11.8

Q ss_pred             ceEEEecCcccccCh
Q 029420            3 DLYALDFDGVLCDSC   17 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~   17 (193)
                      .+++||+||||+.=.
T Consensus       120 ~~LfLDyDGTLaPIv  134 (384)
T PLN02580        120 IALFLDYDGTLSPIV  134 (384)
T ss_pred             eEEEEecCCccCCCC
Confidence            468889999997544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	193
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 2e-04
 Identities = 29/185 (15%), Positives = 63/185 (34%), Gaps = 45/185 (24%)

Query: 17  CGESSL--SAVKAAKVRWPGLFDGVDSVIEDWI-VDQMHILRPVVETGYENLLLVRLLLE 73
            G++ +      + KV+   +   +      W+ +   +    V+E      +L +LL +
Sbjct: 161 SGKTWVALDVCLSYKVQ-CKMDFKIF-----WLNLKNCNSPETVLE------MLQKLLYQ 208

Query: 74  IRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTT 133
           I      +S  S  + +   + +       +++        L+ L     +     +   
Sbjct: 209 IDPNWTSRSDHSSNIKLR--IHSIQAELRRLLKSKPYEN-CLLVL----LNVQ---NAKA 258

Query: 134 WIGANRFYPGIPDALKFASSRIYIVTT--KAVSQML-----YYESLQELQYHLTEFMVWE 186
           W           +A    S +I ++TT  K V+  L      + SL      LT   V  
Sbjct: 259 W-----------NAFNL-SCKI-LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305

Query: 187 LVQRW 191
           L+ ++
Sbjct: 306 LLLKY 310

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	193
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.65
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.61
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.57
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.56
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.55
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.55
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.53
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.52
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.51
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.48
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.47
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.47
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.45
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.43
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.42
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.42
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.39
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.39
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	99.38
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.38
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	99.38
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.38
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.37
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.37
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.36
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	99.36
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.34
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.34
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.34
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.33
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.33
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.31
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.31
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.29
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.29
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.28
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.28
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.28
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.27
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.26
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.26
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.23
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.22
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.2
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.2
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.2
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.17
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.17
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.16
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.15
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.13
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.13
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.1
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.1
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.09
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.08
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.06
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.06
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	98.98
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	98.98
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	98.97
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	98.96
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	98.95
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	98.94
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	98.91
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	98.89
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	98.83
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	98.83
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	98.82
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	98.82
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	98.8
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	98.77
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	98.26
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	98.63
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	98.62
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	98.61
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	98.57
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	98.54
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	98.53
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	98.42
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	98.27
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	98.26
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	98.14
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	98.09
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	98.09
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	98.06
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	98.02
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	97.97
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	97.89
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	97.76
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	97.73
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	97.72
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	97.68
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	97.66
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	97.66
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	97.65
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	97.63
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	97.61
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	97.6
4gxt_A	385	A conserved functionally unknown protein; structur	97.51
3dao_A	283	Putative phosphatse; structural genomics, joint ce	97.49
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	97.43
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	97.42
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	97.32
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	97.22
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	97.15
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	97.12
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	97.09
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	97.04
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	97.03
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	97.03
3mn1_A	189	Probable YRBI family phosphatase; structural genom	97.01
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	97.01
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	96.93
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	96.86
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	96.84
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	96.81
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	96.76
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	96.73
3mmz_A	176	Putative HAD family hydrolase; structural genomics	96.73
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	96.73
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	96.71
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	96.54
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	96.41
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	96.37
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	96.34
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	96.33
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	96.29
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	96.24
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	96.18
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	96.16
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	96.15
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	95.94
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	95.66
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	95.64
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	95.59
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	95.34
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	95.25
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	95.15
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	95.14
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	95.08
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	95.04
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	95.02
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	94.86
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	94.7
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	94.56
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	94.48
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	94.43
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	94.27
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	93.45
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	93.27
2o2x_A	218	Hypothetical protein; structural genomics, joint c	91.68
2o2x_A	218	Hypothetical protein; structural genomics, joint c	91.65
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	91.29
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	90.95
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	89.13
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	88.3
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	85.97
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	81.84
3mn1_A	189	Probable YRBI family phosphatase; structural genom	81.44
3mmz_A	176	Putative HAD family hydrolase; structural genomics	80.99

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.65  E-value=9.9e-16  Score=124.23  Aligned_cols=139  Identities=16%  Similarity=0.182  Sum_probs=91.9

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCC-cchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVD-SVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSI   79 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~-~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~   79 (193)
                      |.|+|+|||||||+||.+.+..+.+.+++.+      |++ ..+       .+.++.++|.+...++ .+.+....    
T Consensus         3 ~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~------g~~~~~~-------~~~~~~~~g~~~~~~~-~~~~~~~~----   64 (240)
T 2hi0_A            3 KYKAAIFDMDGTILDTSADLTSALNYAFEQT------GHRHDFT-------VEDIKNFFGSGVVVAV-TRALAYEA----   64 (240)
T ss_dssp             SCSEEEECSBTTTEECHHHHHHHHHHHHHHT------TSCCCCC-------HHHHHHHCSSCHHHHH-HHHHHHHT----
T ss_pred             cccEEEEecCCCCccCHHHHHHHHHHHHHHc------CCCCCCC-------HHHHHHhcCccHHHHH-HHHHHhcc----
Confidence            4799999999999999999999999999999      565 332       3567889998877665 34331100    


Q ss_pred             ccccccccccHHHHhhhhcchhhhhhh-hcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcE
Q 029420           80 RKSSVSEGLTVEGILENWSKIKPVIME-DWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRI  155 (193)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~l  155 (193)
                             +...... ..+..   .+.. ..+.+.+...+..+.++++|.+.    .....++|||+.++|+   ++|+++
T Consensus        65 -------~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~l~~l~~~g~~~  129 (240)
T 2hi0_A           65 -------GSSRESL-VAFGT---KDEQIPEAVTQTEVNRVLEVFKPYYADH----CQIKTGPFPGILDLMKNLRQKGVKL  129 (240)
T ss_dssp             -------TCCHHHH-TTTTS---TTCCCCTTCCHHHHHHHHHHHHHHHHHT----SSSSCEECTTHHHHHHHHHHTTCEE
T ss_pred             -------ccccccc-ccccc---cccccCCCCCHHHHHHHHHHHHHHHHHh----hhhcCCcCCCHHHHHHHHHHCCCEE
Confidence                   0011111 00000   0000 01234555556666666665543    2345689999999999   789999


Q ss_pred             EEEcCcH--HHHHHHHHHh
Q 029420          156 YIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       156 aVvTnK~--~a~~lL~~~~  172 (193)
                      +|+||++  .++.++++++
T Consensus       130 ~i~t~~~~~~~~~~l~~~~  148 (240)
T 2hi0_A          130 AVVSNKPNEAVQVLVEELF  148 (240)
T ss_dssp             EEEEEEEHHHHHHHHHHHS
T ss_pred             EEEeCCCHHHHHHHHHHcC
Confidence            9999998  7788888764

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.61  E-value=3.3e-15  Score=119.03  Aligned_cols=113  Identities=24%  Similarity=0.219  Sum_probs=79.3

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK   81 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~   81 (193)
                      .|+|+||+||||+||.+.+..+.+.+++++      |.+..+       .+.++.++|.+....+. +.           
T Consensus         4 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~~-~~-----------   58 (210)
T 2ah5_A            4 ITAIFFDLDGTLVDSSIGIHNAFTYTFKEL------GVPSPD-------AKTIRGFMGPPLESSFA-TC-----------   58 (210)
T ss_dssp             CCEEEECSBTTTEECHHHHHHHHHHHHHHH------TCCCCC-------HHHHHHTSSSCHHHHHH-TT-----------
T ss_pred             CCEEEEcCCCcCccCHHHHHHHHHHHHHHc------CCCCCC-------HHHHHHHcCccHHHHHH-HH-----------
Confidence            589999999999999999999999999999      555321       24567778876544331 11           


Q ss_pred             ccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH--hCCCcEEEEc
Q 029420           82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIYIVT  159 (193)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~--~~gi~laVvT  159 (193)
                                                  ++.+..++..+.|+++|.+.    .....++|||+.++|+  ..|++++|+|
T Consensus        59 ----------------------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~l~~L~~~~~l~i~T  106 (210)
T 2ah5_A           59 ----------------------------LSKDQISEAVQIYRSYYKAK----GIYEAQLFPQIIDLLEELSSSYPLYITT  106 (210)
T ss_dssp             ----------------------------SCGGGHHHHHHHHHHHHHHT----GGGSCEECTTHHHHHHHHHTTSCEEEEE
T ss_pred             ----------------------------cCHHHHHHHHHHHHHHHHHh----ccCCCCCCCCHHHHHHHHHcCCeEEEEe
Confidence                                        01112233445555555432    1234679999999999  3399999999


Q ss_pred             CcH--HHHHHHHHH
Q 029420          160 TKA--VSQMLYYES  171 (193)
Q Consensus       160 nK~--~a~~lL~~~  171 (193)
                      |++  .++.+|+++
T Consensus       107 ~~~~~~~~~~l~~~  120 (210)
T 2ah5_A          107 TKDTSTAQDMAKNL  120 (210)
T ss_dssp             EEEHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHhc
Confidence            998  788888876

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.57  E-value=2.4e-14  Score=116.55  Aligned_cols=126  Identities=17%  Similarity=0.159  Sum_probs=88.2

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.|+|+|||||||+||.+.+..+.+.+++.+      |++..+       .+.++.++|.|...++ .+.+...      
T Consensus        22 ~~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~-~~~~~~~------   81 (243)
T 2hsz_A           22 QFKLIGFDLDGTLVNSLPDLALSINSALKDV------NLPQAS-------ENLVMTWIGNGADVLS-QRAVDWA------   81 (243)
T ss_dssp             SCSEEEECSBTTTEECHHHHHHHHHHHHHHT------TCCCCC-------HHHHHHHCSSCHHHHH-HHHHHHH------
T ss_pred             cCCEEEEcCCCcCCCCHHHHHHHHHHHHHHc------CCCCCC-------HHHHHHHhCchHHHHH-HHHhhhh------
Confidence            5689999999999999999999999999999      565432       3557788999877765 2333210      


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                               ....             ..+.+.+.+.+....+.+.|.+.    .....++|||+.++|+   ++|++++|
T Consensus        82 ---------~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~g~~~~i  135 (243)
T 2hsz_A           82 ---------CKQA-------------EKELTEDEFKYFKRQFGFYYGEN----LCNISRLYPNVKETLEALKAQGYILAV  135 (243)
T ss_dssp             ---------HHHH-------------TCCCCHHHHHHHHHHHHHHHHHH----TTSSCEECTTHHHHHHHHHHTTCEEEE
T ss_pred             ---------hccc-------------cccCCHHHHHHHHHHHHHHHHHh----ccccCccCCCHHHHHHHHHHCCCEEEE
Confidence                     0000             01223444444445555555443    3345689999999999   88999999


Q ss_pred             EcCcH--HHHHHHHHHh
Q 029420          158 VTTKA--VSQMLYYESL  172 (193)
Q Consensus       158 vTnK~--~a~~lL~~~~  172 (193)
                      +||.+  .++.+++++.
T Consensus       136 ~t~~~~~~~~~~l~~~g  152 (243)
T 2hsz_A          136 VTNKPTKHVQPILTAFG  152 (243)
T ss_dssp             ECSSCHHHHHHHHHHTT
T ss_pred             EECCcHHHHHHHHHHcC
Confidence            99998  7888888763

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.56  E-value=1.3e-14  Score=114.95  Aligned_cols=116  Identities=16%  Similarity=0.133  Sum_probs=78.3

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK   81 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~   81 (193)
                      .|+|+|||||||+||.+.+..+.+.+++++      |.+..        .+..+.+.|......+ ...+...       
T Consensus         1 IkAViFD~DGTL~ds~~~~~~a~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~-~~~~~~~-------   58 (216)
T 3kbb_A            1 MEAVIFDMDGVLMDTEPLYFEAYRRVAESY------GKPYT--------EDLHRRIMGVPEREGL-PILMEAL-------   58 (216)
T ss_dssp             CCEEEEESBTTTBCCGGGHHHHHHHHHHHT------TCCCC--------HHHHHHHTTSCHHHHH-HHHHHHT-------
T ss_pred             CeEEEECCCCcccCCHHHHHHHHHHHHHHc------CCCCC--------HHHHHHHhccchhhhh-hhhhhcc-------
Confidence            379999999999999999999999999999      56532        2556777777655554 1222110       


Q ss_pred             ccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEE
Q 029420           82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIV  158 (193)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVv  158 (193)
                           ..                    ....+   +....+.+.+...+    ....+++||+.++|+   ++|++++|+
T Consensus        59 -----~~--------------------~~~~~---~~~~~~~~~~~~~~----~~~~~~~pg~~~~l~~L~~~g~~~~i~  106 (216)
T 3kbb_A           59 -----EI--------------------KDSLE---NFKKRVHEEKKRVF----SELLKENPGVREALEFVKSKRIKLALA  106 (216)
T ss_dssp             -----TC--------------------CSCHH---HHHHHHHHHHHHHH----HHHCCBCTTHHHHHHHHHHTTCEEEEE
T ss_pred             -----cc--------------------hhhHH---HHHHHHHHHHHHHH----HHhcccCccHHHHHHHHHHcCCCcccc
Confidence                 00                    00111   11222333333222    234689999999999   899999999


Q ss_pred             cCcH--HHHHHHHHH
Q 029420          159 TTKA--VSQMLYYES  171 (193)
Q Consensus       159 TnK~--~a~~lL~~~  171 (193)
                      ||++  .+..+++.+
T Consensus       107 tn~~~~~~~~~l~~~  121 (216)
T 3kbb_A          107 TSTPQREALERLRRL  121 (216)
T ss_dssp             CSSCHHHHHHHHHHT
T ss_pred             cCCcHHHHHHHHHhc
Confidence            9998  788888776

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.55  E-value=4e-14  Score=112.04  Aligned_cols=116  Identities=16%  Similarity=0.168  Sum_probs=85.9

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.|+|+||+||||+||-+.+..+.+.+++++      |.+...       .+.++.++|.+....+. ..+         
T Consensus         3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~~-~~~---------   59 (226)
T 3mc1_A            3 LYNYVLFDLDGTLTDSAEGITKSVKYSLNKF------DIQVED-------LSSLNKFVGPPLKTSFM-EYY---------   59 (226)
T ss_dssp             CCCEEEECSBTTTBCCHHHHHHHHHHHHHTT------TCCCSC-------GGGGGGGSSSCHHHHHH-HHH---------
T ss_pred             CCCEEEEeCCCccccCHHHHHHHHHHHHHHc------CCCCCC-------HHHHHHHhCcCHHHHHH-HHh---------
Confidence            5799999999999999999999999999999      555432       35677788877655541 221         


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                                                  +++.+........+++.|.+    .......+|||+.++|+   ++|++++|
T Consensus        60 ----------------------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~~~g~~~~i  107 (226)
T 3mc1_A           60 ----------------------------NFDEETATVAIDYYRDYFKA----KGMFENKVYDGIEALLSSLKDYGFHLVV  107 (226)
T ss_dssp             ----------------------------CCCHHHHHHHHHHHHHHHTT----TGGGSCCBCTTHHHHHHHHHHHTCEEEE
T ss_pred             ----------------------------CCCHHHHHHHHHHHHHHHHH----hCcccCccCcCHHHHHHHHHHCCCeEEE
Confidence                                        23344444455555655443    23445789999999999   88999999


Q ss_pred             EcCcH--HHHHHHHHH
Q 029420          158 VTTKA--VSQMLYYES  171 (193)
Q Consensus       158 vTnK~--~a~~lL~~~  171 (193)
                      +||.+  .++.+++.+
T Consensus       108 ~t~~~~~~~~~~l~~~  123 (226)
T 3mc1_A          108 ATSKPTVFSKQILEHF  123 (226)
T ss_dssp             EEEEEHHHHHHHHHHT
T ss_pred             EeCCCHHHHHHHHHHh
Confidence            99988  788888776

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.55  E-value=7.4e-14  Score=114.45  Aligned_cols=124  Identities=18%  Similarity=0.168  Sum_probs=82.2

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.|+|+|||||||+||.+....+.+.+++++      |++..        .+..+.+.|.+....+ .+.+...      
T Consensus        25 MIKaViFDlDGTLvDs~~~~~~a~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~-~~~~~~~------   83 (250)
T 4gib_A           25 MIEAFIFDLDGVITDTAYYHYMAWRKLAHKV------GIDID--------TKFNESLKGISRMESL-DRILEFG------   83 (250)
T ss_dssp             CCCEEEECTBTTTBCCHHHHHHHHHHHHHTT------TCCCC--------TTGGGGTTTCCHHHHH-HHHHHHT------
T ss_pred             hhheeeecCCCcccCCHHHHHHHHHHHHHHc------CCCCC--------HHHHHHHhCcchHHHH-HHhhhhh------
Confidence            8899999999999999999999999999999      55532        2445667776655544 2322110      


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                                              ...++.+.+......+.+.++|...+..  .....+|||+.++|+   ++|+++++
T Consensus        84 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~ll~~Lk~~g~~i~i  137 (250)
T 4gib_A           84 ------------------------NKKYSFSEEEKVRMAEEKNNYYVSLIDE--ITSNDILPGIESLLIDVKSNNIKIGL  137 (250)
T ss_dssp             ------------------------TCTTTSCHHHHHHHHHHHHHHHHHHHTT--CCGGGSCTTHHHHHHHHHHTTCEEEE
T ss_pred             ------------------------cCCCCCCHHHHHHHHHHHHHHHHHHHhh--ccccccchhHHHHHHHHHhccccccc
Confidence                                    0111223333333444444444443222  234578999999999   89999999


Q ss_pred             EcCcHHHHHHHHHH
Q 029420          158 VTTKAVSQMLYYES  171 (193)
Q Consensus       158 vTnK~~a~~lL~~~  171 (193)
                      +||++.+..+|+++
T Consensus       138 ~~~~~~~~~~L~~~  151 (250)
T 4gib_A          138 SSASKNAINVLNHL  151 (250)
T ss_dssp             CCSCTTHHHHHHHH
T ss_pred             ccccchhhhHhhhc
Confidence            99887555677766

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.53  E-value=1.5e-13  Score=112.26  Aligned_cols=124  Identities=15%  Similarity=0.112  Sum_probs=80.3

Q ss_pred             CC-ceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccc
Q 029420            1 MA-DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSI   79 (193)
Q Consensus         1 ~~-~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~   79 (193)
                      |+ |+|+|||||||+||.+.+..+.+.+++++      |++..        .+..+.+.|.+....+ .+.+...     
T Consensus         3 MkiKaViFDlDGTL~Ds~~~~~~a~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~-~~~~~~~-----   62 (243)
T 4g9b_A            3 MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEI------GISID--------AQFNESLKGISRDESL-RRILQHG-----   62 (243)
T ss_dssp             CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHT------TCCCC--------TTGGGGGTTCCHHHHH-HHHHHHT-----
T ss_pred             ccCcEEEEcCCCcccCCHHHHHHHHHHHHHHc------CCCCC--------HHHHHHHcCCCHHHHH-HHHHHHh-----
Confidence            54 99999999999999999999999999999      56532        2556788888877665 2333221     


Q ss_pred             ccccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEE
Q 029420           80 RKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIY  156 (193)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~la  156 (193)
                             +...                  ..+.....+........|......  .....++||+.++|+   ++|++++
T Consensus        63 -------~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~pg~~~ll~~L~~~g~~i~  115 (243)
T 4g9b_A           63 -------GKEG------------------DFNSQERAQLAYRKNLLYVHSLRE--LTVNAVLPGIRSLLADLRAQQISVG  115 (243)
T ss_dssp             -------TCGG------------------GCCHHHHHHHHHHHHHHHHHHHHT--CCGGGBCTTHHHHHHHHHHTTCEEE
T ss_pred             -------hccc------------------chhHHHHHHHHHHHHHHHHHHHHh--cccccccccHHHHHHhhhcccccce
Confidence                   1000                  011111112222222222222111  234578999999999   8999999


Q ss_pred             EEcCcHHHHHHHHHH
Q 029420          157 IVTTKAVSQMLYYES  171 (193)
Q Consensus       157 VvTnK~~a~~lL~~~  171 (193)
                      |+||+..+..+|+++
T Consensus       116 i~t~~~~~~~~l~~~  130 (243)
T 4g9b_A          116 LASVSLNAPTILAAL  130 (243)
T ss_dssp             ECCCCTTHHHHHHHT
T ss_pred             ecccccchhhhhhhh
Confidence            999988556667765

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.52  E-value=2.7e-14  Score=114.60  Aligned_cols=115  Identities=20%  Similarity=0.275  Sum_probs=82.3

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.|+|+|||||||+||.+.+..+.+.+++++      |++..+       .+.++.++|.+...++ .+.+..       
T Consensus         2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~-~~~~~~-------   60 (222)
T 2nyv_A            2 SLRVILFDLDGTLIDSAKDIALALEKTLKEL------GLEEYY-------PDNVTKYIGGGVRALL-EKVLKD-------   60 (222)
T ss_dssp             EECEEEECTBTTTEECHHHHHHHHHHHHHHT------TCGGGC-------CSCGGGGCSSCHHHHH-HHHHGG-------
T ss_pred             CCCEEEECCCCcCCCCHHHHHHHHHHHHHHc------CCCCCC-------HHHHHHHhCcCHHHHH-HHHhCh-------
Confidence            3689999999999999999999999999999      565321       3567788888876665 233210       


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                                                      +...+....+++.|.+    ......++|||+.++|+   ++|++++|
T Consensus        61 --------------------------------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~~~g~~~~i  104 (222)
T 2nyv_A           61 --------------------------------KFREEYVEVFRKHYLE----NPVVYTKPYPEIPYTLEALKSKGFKLAV  104 (222)
T ss_dssp             --------------------------------GCCTHHHHHHHHHHHH----CSCSSCEECTTHHHHHHHHHHTTCEEEE
T ss_pred             --------------------------------HHHHHHHHHHHHHHHH----hccccCccCCCHHHHHHHHHHCCCeEEE
Confidence                                            0001222334444433    23345789999999999   78999999


Q ss_pred             EcCcH--HHHHHHHHHh
Q 029420          158 VTTKA--VSQMLYYESL  172 (193)
Q Consensus       158 vTnK~--~a~~lL~~~~  172 (193)
                      +||++  .++.+++.+.
T Consensus       105 ~s~~~~~~~~~~l~~~g  121 (222)
T 2nyv_A          105 VSNKLEELSKKILDILN  121 (222)
T ss_dssp             ECSSCHHHHHHHHHHTT
T ss_pred             EcCCCHHHHHHHHHHcC
Confidence            99998  7888888763

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.51  E-value=1.7e-13  Score=109.96  Aligned_cols=115  Identities=16%  Similarity=0.196  Sum_probs=86.5

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.|+|+||+||||+|+-+.+..+.+.+++++      |.+ ..       .+.++.+.|.+....+. +.          
T Consensus        28 mik~iifDlDGTL~d~~~~~~~~~~~~~~~~------g~~-~~-------~~~~~~~~g~~~~~~~~-~~----------   82 (240)
T 3sd7_A           28 NYEIVLFDLDGTLTDPKEGITKSIQYSLNSF------GIK-ED-------LENLDQFIGPPLHDTFK-EY----------   82 (240)
T ss_dssp             CCSEEEECSBTTTEECHHHHHHHHHHHHHHT------TCC-CC-------GGGGGGGSSSCHHHHHH-HT----------
T ss_pred             hccEEEEecCCcCccCHHHHHHHHHHHHHHc------CCC-CC-------HHHHHHHhCccHHHHHH-HH----------
Confidence            5699999999999999999999999999999      566 32       36678888876544431 11          


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                                                 ++++.+...+....+++.|.+.    ......+|||+.++|+   ++|++++|
T Consensus        83 ---------------------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~g~~~~i  131 (240)
T 3sd7_A           83 ---------------------------YKFEDKKAKEAVEKYREYFADK----GIFENKIYENMKEILEMLYKNGKILLV  131 (240)
T ss_dssp             ---------------------------SCCCHHHHHHHHHHHHHHHHHT----GGGCCEECTTHHHHHHHHHHTTCEEEE
T ss_pred             ---------------------------hCCCHHHHHHHHHHHHHHHHHh----cccccccCccHHHHHHHHHHCCCeEEE
Confidence                                       2344555555666666666543    3445789999999999   88999999


Q ss_pred             EcCcH--HHHHHHHHH
Q 029420          158 VTTKA--VSQMLYYES  171 (193)
Q Consensus       158 vTnK~--~a~~lL~~~  171 (193)
                      +||.+  .++.+++.+
T Consensus       132 ~s~~~~~~~~~~l~~~  147 (240)
T 3sd7_A          132 ATSKPTVFAETILRYF  147 (240)
T ss_dssp             EEEEEHHHHHHHHHHT
T ss_pred             EeCCcHHHHHHHHHHc
Confidence            99987  788888776

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.48  E-value=1.8e-13  Score=108.63  Aligned_cols=117  Identities=10%  Similarity=0.007  Sum_probs=76.7

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHH-hcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKV-RWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSI   79 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~-l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~   79 (193)
                      |.|+|+|||||||+||-+.+..+.+.++++ +      |.+..         ..++...|.+....+ ...+..      
T Consensus         3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~~------g~~~~---------~~~~~~~g~~~~~~~-~~~~~~------   60 (234)
T 2hcf_A            3 SRTLVLFDIDGTLLKVESMNRRVLADALIEVY------GTEGS---------TGSHDFSGKMDGAII-YEVLSN------   60 (234)
T ss_dssp             CCEEEEECCBTTTEEECTHHHHHHHHHHHHHH------SCCCC---------C---CCTTCCHHHHH-HHHHHT------
T ss_pred             cceEEEEcCCCCcccCccchHHHHHHHHHHHh------CCCCc---------cchhhhcCCChHHHH-HHHHHH------
Confidence            579999999999999999999999999988 6      44321         245667787765543 122211      


Q ss_pred             ccccccccccHHHHhhhhcchhhhhhhhcCCC----HHHHHHHHHHHHHHHHHhhhhccc-cCCCCCCCHHHHHH---hC
Q 029420           80 RKSSVSEGLTVEGILENWSKIKPVIMEDWSEN----RDALVDLFGKVRDEWMDKDLTTWI-GANRFYPGIPDALK---FA  151 (193)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~----~e~~~~~~~~~r~~y~~~y~~~~~-~~~~lypGV~e~L~---~~  151 (193)
                                                  +|++    ++.+......|..+|.+.    .. ....++||+.++|+   ++
T Consensus        61 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~~~  108 (234)
T 2hcf_A           61 ----------------------------VGLERAEIADKFDKAKETYIALFRER----ARREDITLLEGVRELLDALSSR  108 (234)
T ss_dssp             ----------------------------TTCCHHHHHHHHHHHHHHHHHHHHHH----CCGGGEEECTTHHHHHHHHHTC
T ss_pred             ----------------------------cCCCcccchhHHHHHHHHHHHHHHHH----hccCCCCcCCCHHHHHHHHHhC
Confidence                                        1221    112233334444444332    22 34578999999999   67


Q ss_pred             -CCcEEEEcCcH--HHHHHHHHH
Q 029420          152 -SSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       152 -gi~laVvTnK~--~a~~lL~~~  171 (193)
                       |++++|+||++  .++.+++.+
T Consensus       109 ~g~~~~i~t~~~~~~~~~~l~~~  131 (234)
T 2hcf_A          109 SDVLLGLLTGNFEASGRHKLKLP  131 (234)
T ss_dssp             TTEEEEEECSSCHHHHHHHHHTT
T ss_pred             CCceEEEEcCCcHHHHHHHHHHC
Confidence             89999999998  777777765

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.47  E-value=4.1e-13  Score=109.11  Aligned_cols=128  Identities=13%  Similarity=0.090  Sum_probs=90.3

Q ss_pred             CceEEEecCcccccChHHH-HHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            2 ADLYALDFDGVLCDSCGES-SLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di-~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      .|+|+||+||||+||-+.+ ..+.+.+++++      |++..        ...++.++|.+....+ ...+..       
T Consensus        14 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~~~~~~~~~-~~~~~~-------   71 (277)
T 3iru_A           14 VEALILDWAGTTIDFGSLAPVYAFMELFKQE------GIEVT--------QAEAREPMGTEKSEHI-RRMLGN-------   71 (277)
T ss_dssp             CCEEEEESBTTTBSTTCCHHHHHHHHHHHTT------TCCCC--------HHHHHTTTTSCHHHHH-HHHTTS-------
T ss_pred             CcEEEEcCCCCcccCCcccHHHHHHHHHHHh------CCCCC--------HHHHHHHhcCchHHHH-HHhccc-------
Confidence            5899999999999997655 78888999998      56532        3667889998877765 233211       


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhc--CCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDW--SENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRI  155 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~--g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~l  155 (193)
                                ....       ..+...+  .++.+.+.+....++++|.+.+    .....+|||+.++|+   ++|+++
T Consensus        72 ----------~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~l~~~g~~~  130 (277)
T 3iru_A           72 ----------SRIA-------NAWLSIKGQASNEEDIKRLYDLFAPIQTRIV----AQRSQLIPGWKEVFDKLIAQGIKV  130 (277)
T ss_dssp             ----------HHHH-------HHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH----HHTCCBCTTHHHHHHHHHHTTCEE
T ss_pred             ----------hHHH-------HHHHHHhccCCCHHHHHHHHHHHHHHHHHHh----hccCccCcCHHHHHHHHHHcCCeE
Confidence                      0000       1111222  3466667777777777766543    334689999999999   889999


Q ss_pred             EEEcCcH--HHHHHHHHHh
Q 029420          156 YIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       156 aVvTnK~--~a~~lL~~~~  172 (193)
                      +|+||++  .++.+++++.
T Consensus       131 ~i~tn~~~~~~~~~l~~~~  149 (277)
T 3iru_A          131 GGNTGYGPGMMAPALIAAK  149 (277)
T ss_dssp             EEECSSCHHHHHHHHHHHH
T ss_pred             EEEeCCchHHHHHHHHhcC
Confidence            9999998  7777777653

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.47  E-value=3.9e-13  Score=107.25  Aligned_cols=120  Identities=18%  Similarity=0.184  Sum_probs=84.1

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      +.|+|+|||||||+|+-+.+..+.+.+++++      | ...       ..+.++.+.|.+...++ ...+..       
T Consensus        18 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g-~~~-------~~~~~~~~~g~~~~~~~-~~~~~~-------   75 (237)
T 4ex6_A           18 ADRGVILDLDGTLADTPAAIATITAEVLAAM------G-TAV-------SRGAILSTVGRPLPASL-AGLLGV-------   75 (237)
T ss_dssp             CCEEEEECSBTTTBCCHHHHHHHHHHHHHHT------T-CCC-------CHHHHHHHTTSCHHHHH-HHHHTS-------
T ss_pred             cCCEEEEcCCCCCcCCHHHHHHHHHHHHHHc------C-CCC-------CHHHHHHhcCccHHHHH-HHHhCC-------
Confidence            3589999999999999999999999999999      4 222       13567778888877665 233211       


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                                                  ..+.+.+.+....+++.|.+.+..  .....+|||+.++|+   ++|++++|
T Consensus        76 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~g~~~~i  125 (237)
T 4ex6_A           76 ----------------------------PVEDPRVAEATEEYGRRFGAHVRA--AGPRLLYPGVLEGLDRLSAAGFRLAM  125 (237)
T ss_dssp             ----------------------------CTTSHHHHHHHHHHHHHHHHHHHH--HGGGGBCTTHHHHHHHHHHTTEEEEE
T ss_pred             ----------------------------CCCHHHHHHHHHHHHHHHHHhccc--ccCCccCCCHHHHHHHHHhCCCcEEE
Confidence                                        011223334444555555443210  035689999999999   78999999


Q ss_pred             EcCcH--HHHHHHHHHh
Q 029420          158 VTTKA--VSQMLYYESL  172 (193)
Q Consensus       158 vTnK~--~a~~lL~~~~  172 (193)
                      +||++  .++.+++++.
T Consensus       126 ~s~~~~~~~~~~l~~~~  142 (237)
T 4ex6_A          126 ATSKVEKAARAIAELTG  142 (237)
T ss_dssp             ECSSCHHHHHHHHHHHT
T ss_pred             EcCCChHHHHHHHHHcC
Confidence            99998  7888888763

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.45  E-value=6.8e-13  Score=104.97  Aligned_cols=119  Identities=17%  Similarity=0.123  Sum_probs=84.6

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.|+|+||+||||+|+-+.+..+...+++++      |++..        ...++.++|.+...++ ...+...      
T Consensus         5 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~-~~~~~~~------   63 (233)
T 3s6j_A            5 PQTSFIFDLDGTLTDSVYQNVAAWKEALDAE------NIPLA--------MWRIHRKIGMSGGLML-KSLSRET------   63 (233)
T ss_dssp             CCCEEEECCBTTTEECHHHHHHHHHHHHHHT------TCCCC--------HHHHHHHTTSCHHHHH-HHHHHC-------
T ss_pred             cCcEEEEcCCCccccChHHHHHHHHHHHHHc------CCCCC--------HHHHHHHcCCcHHHHH-HHHHHhc------
Confidence            5689999999999999999999999999999      55532        2456777887766554 2222110      


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                            +                    ...+.+.+.+....+++.|.+.     .....+|||+.++|+   +.|++++|
T Consensus        64 ------~--------------------~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~l~~~g~~~~i  112 (233)
T 3s6j_A           64 ------G--------------------MSITDEQAERLSEKHAQAYERL-----QHQIIALPGAVELLETLDKENLKWCI  112 (233)
T ss_dssp             -----------------------------CCHHHHHHHHHHHHHHHHHT-----GGGCEECTTHHHHHHHHHHTTCCEEE
T ss_pred             ------C--------------------CCCCHHHHHHHHHHHHHHHHHh-----hccCccCCCHHHHHHHHHHCCCeEEE
Confidence                  0                    0123444555555556655442     235689999999999   88999999


Q ss_pred             EcCcH--HHHHHHHHH
Q 029420          158 VTTKA--VSQMLYYES  171 (193)
Q Consensus       158 vTnK~--~a~~lL~~~  171 (193)
                      +||.+  .++.+++.+
T Consensus       113 ~s~~~~~~~~~~l~~~  128 (233)
T 3s6j_A          113 ATSGGIDTATINLKAL  128 (233)
T ss_dssp             ECSSCHHHHHHHHHTT
T ss_pred             EeCCchhhHHHHHHhc
Confidence            99988  777887765

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.43  E-value=3.9e-13  Score=105.71  Aligned_cols=112  Identities=15%  Similarity=0.108  Sum_probs=76.5

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.|+|+|||||||+||-+.+..+.+.+++++      |.+..        .+.++.++|.+...++  +.+         
T Consensus         3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~--~~~---------   57 (209)
T 2hdo_A            3 TYQALMFDIDGTLTNSQPAYTTVMREVLATY------GKPFS--------PAQAQKTFPMAAEQAM--TEL---------   57 (209)
T ss_dssp             CCSEEEECSBTTTEECHHHHHHHHHHHHHTT------TCCCC--------HHHHHHHTTSCHHHHH--HHT---------
T ss_pred             cccEEEEcCCCCCcCCHHHHHHHHHHHHHHh------CCCCC--------HHHHHHHcCCcHHHHH--HHc---------
Confidence            4699999999999999999999999999998      55322        2556777777655443  111         


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                                                  |.+.+.+.+.+..+.+.+..     ......++||+.++|+   ++ ++++|
T Consensus        58 ----------------------------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~l~~~-~~~~i  103 (209)
T 2hdo_A           58 ----------------------------GIAASEFDHFQAQYEDVMAS-----HYDQIELYPGITSLFEQLPSE-LRLGI  103 (209)
T ss_dssp             ----------------------------TCCGGGHHHHHHHHHHHHTT-----CGGGCEECTTHHHHHHHSCTT-SEEEE
T ss_pred             ----------------------------CCCHHHHHHHHHHHHHHHhh-----hcccCCcCCCHHHHHHHHHhc-CcEEE
Confidence                                        12222222233333333221     1234679999999999   56 99999


Q ss_pred             EcCcH--HHHHHHHHH
Q 029420          158 VTTKA--VSQMLYYES  171 (193)
Q Consensus       158 vTnK~--~a~~lL~~~  171 (193)
                      +||++  .++.+++.+
T Consensus       104 ~s~~~~~~~~~~l~~~  119 (209)
T 2hdo_A          104 VTSQRRNELESGMRSY  119 (209)
T ss_dssp             ECSSCHHHHHHHHTTS
T ss_pred             EeCCCHHHHHHHHHHc
Confidence            99998  777787766

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.42  E-value=1.3e-12  Score=103.94  Aligned_cols=123  Identities=14%  Similarity=0.116  Sum_probs=83.1

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK   81 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~   81 (193)
                      .|+|+|||||||+||-+.+..+.+.+++++      |.+..        .+.++.+.|.+....+ ...+...       
T Consensus         2 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~-~~~~~~~-------   59 (233)
T 3nas_A            2 LKAVIFDLDGVITDTAEYHFLAWKHIAEQI------DIPFD--------RDMNERLKGISREESL-ESILIFG-------   59 (233)
T ss_dssp             CCEEEECSBTTTBCHHHHHHHHHHHHHHHT------TCCCC--------HHHHHHTTTCCHHHHH-HHHHHHT-------
T ss_pred             CcEEEECCCCCcCCCHHHHHHHHHHHHHHc------CCCCC--------HHHHHHHcCCCHHHHH-HHHHHHh-------
Confidence            489999999999999999999999999999      56532        3567888888766654 2222110       


Q ss_pred             ccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEE
Q 029420           82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIV  158 (193)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVv  158 (193)
                           +.                  ...++.+++......+.+.|.+....  .....+|||+.++|+   ++|++++|+
T Consensus        60 -----~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~g~~~~i~  114 (233)
T 3nas_A           60 -----GA------------------ETKYTNAEKQELMHRKNRDYQMLISK--LTPEDLLPGIGRLLCQLKNENIKIGLA  114 (233)
T ss_dssp             -----TC------------------TTTSCHHHHHHHHHHHHHHHHHHHHT--CCGGGSCTTHHHHHHHHHHTTCEEEEC
T ss_pred             -----CC------------------CCCCCHHHHHHHHHHHHHHHHHHHhh--cCcCCcCcCHHHHHHHHHHCCCcEEEE
Confidence                 00                  00124444555555566655543211  112348999999999   889999999


Q ss_pred             cCcHHHHHHHHHH
Q 029420          159 TTKAVSQMLYYES  171 (193)
Q Consensus       159 TnK~~a~~lL~~~  171 (193)
                      ||++.++.+++.+
T Consensus       115 t~~~~~~~~l~~~  127 (233)
T 3nas_A          115 SSSRNAPKILRRL  127 (233)
T ss_dssp             CSCTTHHHHHHHT
T ss_pred             cCchhHHHHHHHc
Confidence            9987555566665

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.42  E-value=2.9e-13  Score=109.19  Aligned_cols=117  Identities=18%  Similarity=0.113  Sum_probs=72.0

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhcc-HHHHHHHHHHhhhcccccc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETG-YENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G-~~~ll~~~~l~~~~~~~~~   80 (193)
                      .++|+|||||||+||.+.+..+.+.+++++      |++...  ......+.++..+|.. ....+ .+ +...      
T Consensus        11 ~k~viFDlDGTL~ds~~~~~~~~~~~~~~~------g~~~~~--~~~~~~~~~~~~~g~~~~~~~~-~~-~~~~------   74 (231)
T 2p11_A           11 DIVFLFDCDNTLLDNDHVLADLRAHMMREF------GAQNSA--RYWEIFETLRTELGYADYLGAL-QR-YRLE------   74 (231)
T ss_dssp             SEEEEECCBTTTBCHHHHHHHHHHHHHHHH------CHHHHH--HHHHHHHHHHHHC-CCCHHHHH-HH-HHHH------
T ss_pred             CeEEEEcCCCCCEecHHHHHHHHHHHHHHc------CCCcch--HHHHHHHHHHHhcCchHHHHHH-HH-HHhc------
Confidence            579999999999999999999999999999      554211  1111134455555543 11111 11 1000      


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                                                 ...  +   +....++++|...     ....++|||+.++|+   ++| +++|
T Consensus        75 ---------------------------~~~--~---~~~~~~~~~~~~~-----~~~~~~~~g~~~~l~~l~~~g-~~~i  116 (231)
T 2p11_A           75 ---------------------------QPR--D---TRLLLMSSFLIDY-----PFASRVYPGALNALRHLGARG-PTVI  116 (231)
T ss_dssp             ---------------------------CTT--C---TGGGGGHHHHHHC-----CGGGGBCTTHHHHHHHHHTTS-CEEE
T ss_pred             ---------------------------ccc--c---hHHHHHHHHHHHH-----HHhCCcCccHHHHHHHHHhCC-CEEE
Confidence                                       000  0   0011123333221     234689999999999   778 9999


Q ss_pred             EcCcH--HHHHHHHHHh
Q 029420          158 VTTKA--VSQMLYYESL  172 (193)
Q Consensus       158 vTnK~--~a~~lL~~~~  172 (193)
                      +||++  .++.+|++++
T Consensus       117 ~Tn~~~~~~~~~l~~~g  133 (231)
T 2p11_A          117 LSDGDVVFQPRKIARSG  133 (231)
T ss_dssp             EEECCSSHHHHHHHHTT
T ss_pred             EeCCCHHHHHHHHHHcC
Confidence            99999  8888888873

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.39  E-value=4.3e-12  Score=99.51  Aligned_cols=123  Identities=18%  Similarity=0.212  Sum_probs=79.3

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.|+|+|||||||+||-+.+..+...+++++      |.+..+       ...++.+.|.+....+ ...+...      
T Consensus         1 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~-~~~~~~~------   60 (221)
T 2wf7_A            1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEI------GINGVD-------RQFNEQLKGVSREDSL-QKILDLA------   60 (221)
T ss_dssp             CCCEEEECCBTTTBTHHHHHHHHHHHHHHHT------TCCCCS-------HHHHTTTTTCCHHHHH-HHHHHHT------
T ss_pred             CCcEEEECCCCcccCChHHHHHHHHHHHHHc------CCCCCC-------HHHHHHhCCCCHHHHH-HHHHHHh------
Confidence            7899999999999999999999999999998      554221       2345667776655443 1222110      


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                            +                    ..++.+.+.+....+++.|.+....  .....++||+.++|+   +.|++++|
T Consensus        61 ------~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~g~~~~i  112 (221)
T 2wf7_A           61 ------D--------------------KKVSAEEFKELAKRKNDNYVKMIQD--VSPADVYPGILQLLKDLRSNKIKIAL  112 (221)
T ss_dssp             ------T--------------------CCCCHHHHHHHHHHHHHHHHHHGGG--CCGGGBCTTHHHHHHHHHHTTCEEEE
T ss_pred             ------C--------------------CCCChHHHHHHHHHHHHHHHHHHhh--ccCCCCCCCHHHHHHHHHHCCCeEEE
Confidence                  0                    0123444444455555555443211  113578999999998   78999999


Q ss_pred             EcCcHHHHHHHHHH
Q 029420          158 VTTKAVSQMLYYES  171 (193)
Q Consensus       158 vTnK~~a~~lL~~~  171 (193)
                      +||+..++.+++++
T Consensus       113 ~t~~~~~~~~l~~~  126 (221)
T 2wf7_A          113 ASASKNGPFLLERM  126 (221)
T ss_dssp             CCCCTTHHHHHHHT
T ss_pred             EcCcHHHHHHHHHc
Confidence            99986334455544

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.39  E-value=1.1e-12  Score=101.72  Aligned_cols=117  Identities=12%  Similarity=0.026  Sum_probs=78.6

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.|+|+||+||||+||-+.+..+.+.+++++      |.+..        .+.++.+.|.+.+.++ ...+...      
T Consensus         4 m~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~-~~~~~~~------   62 (214)
T 3e58_A            4 MVEAIIFDMDGVLFDTEKYYYDRRASFLGQK------GISID--------HLPPSFFIGGNTKQVW-ENILRDE------   62 (214)
T ss_dssp             CCCEEEEESBTTTBCCHHHHHHHHHHHHHHT------TCCCT--------TSCHHHHTTSCGGGCH-HHHHGGG------
T ss_pred             cccEEEEcCCCCccccHHHHHHHHHHHHHHc------CCCCC--------HHHHHHHcCCCHHHHH-HHHHHhh------
Confidence            7899999999999999999999999999999      45422        2456777777655554 1222110      


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccc-cCCCCCCCHHHHHH---hCCCcEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWI-GANRFYPGIPDALK---FASSRIY  156 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~-~~~~lypGV~e~L~---~~gi~la  156 (193)
                            +.                    ..+.+   +....+++.+.+.    .. ....+|||+.++|+   ++|++++
T Consensus        63 ------~~--------------------~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~~~g~~~~  109 (214)
T 3e58_A           63 ------YD--------------------KWDVS---TLQEEYNTYKQNN----PLPYKELIFPDVLKVLNEVKSQGLEIG  109 (214)
T ss_dssp             ------GG--------------------GSCHH---HHHHHHHHHHHHS----CCCHHHHBCTTHHHHHHHHHHTTCEEE
T ss_pred             ------cC--------------------CCCHH---HHHHHHHHHHHHh----hcccCCCcCchHHHHHHHHHHCCCCEE
Confidence                  00                    01112   2223334433322    11 12379999999999   8899999


Q ss_pred             EEcCcH--HHHHHHHHH
Q 029420          157 IVTTKA--VSQMLYYES  171 (193)
Q Consensus       157 VvTnK~--~a~~lL~~~  171 (193)
                      |+||.+  .++.+++++
T Consensus       110 i~s~~~~~~~~~~l~~~  126 (214)
T 3e58_A          110 LASSSVKADIFRALEEN  126 (214)
T ss_dssp             EEESSCHHHHHHHHHHT
T ss_pred             EEeCCcHHHHHHHHHHc
Confidence            999998  788888776

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=99.38  E-value=1.1e-12  Score=102.40  Aligned_cols=26  Identities=27%  Similarity=0.354  Sum_probs=23.5

Q ss_pred             CCceEEEecCcccccChHHHHHHHHH
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVK   26 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~   26 (193)
                      |.++|+||+||||+||.+.+..+.+.
T Consensus         3 m~~~viFD~DGtL~Ds~~~~~~~~~~   28 (180)
T 3bwv_A            3 TRQRIAIDMDEVLADTLGAVVKAVNE   28 (180)
T ss_dssp             CCCEEEEETBTTTBCHHHHHHHHHHH
T ss_pred             cccEEEEeCCCcccccHHHHHHHHHH
Confidence            56899999999999999999888875

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.38  E-value=5.1e-12  Score=100.90  Aligned_cols=118  Identities=14%  Similarity=0.039  Sum_probs=77.7

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.|+|+||+||||+||-+.+..+.+.+++++      |.+..        .+.++...|......+ ...+...      
T Consensus        22 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~-~~~~~~~------   80 (247)
T 3dv9_A           22 DLKAVLFDMDGVLFDSMPNHAESWHKIMKRF------GFGLS--------REEAYMHEGRTGASTI-NIVSRRE------   80 (247)
T ss_dssp             CCCEEEEESBTTTBCCHHHHHHHHHHHHHHT------TCCCC--------HHHHHHTTTSCHHHHH-HHHHHHH------
T ss_pred             CCCEEEECCCCccCcCHHHHHHHHHHHHHHc------CCCCC--------HHHHHHHhCCChHHHH-HHHHHHh------
Confidence            3589999999999999999999999999999      55543        1334445555443333 1221110      


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                                      +         ....+.+.+.+....+.++|..      .....+|||+.++|+   ++|++++|
T Consensus        81 ----------------~---------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~l~~~g~~~~i  129 (247)
T 3dv9_A           81 ----------------R---------GHDATEEEIKAIYQAKTEEFNK------CPKAERMPGALEVLTKIKSEGLTPMV  129 (247)
T ss_dssp             ----------------H---------SSCCCHHHHHHHHHHHHHHHTT------SCCCCBCTTHHHHHHHHHHTTCEEEE
T ss_pred             ----------------c---------CCCCCHHHHHHHHHHHHHHHHh------cccCCCCCCHHHHHHHHHHcCCcEEE
Confidence                            0         0112455555555555554422      234689999999998   89999999


Q ss_pred             EcCcH--HHHHHHHH
Q 029420          158 VTTKA--VSQMLYYE  170 (193)
Q Consensus       158 vTnK~--~a~~lL~~  170 (193)
                      +||.+  .+...+++
T Consensus       130 ~t~~~~~~~~~~l~~  144 (247)
T 3dv9_A          130 VTGSGQTSLLDRLNH  144 (247)
T ss_dssp             ECSCC---CHHHHHH
T ss_pred             EcCCchHHHHHHHHh
Confidence            99998  56666654

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=99.38  E-value=4.4e-13  Score=105.90  Aligned_cols=106  Identities=18%  Similarity=0.100  Sum_probs=69.3

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK   81 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~   81 (193)
                      .++|+|||||||+||.+.+..+.+.+++  |      ++..+       .+.++.+++.   ..+ .+.+          
T Consensus         2 ~k~viFDlDGTL~Ds~~~~~~~~~~~~~--g------~~~~~-------~~~~~~~~~~---~~~-~~~~----------   52 (193)
T 2i7d_A            2 SVRVLVDMDGVLADFEAGLLRGFRRRFP--E------EPHVP-------LEQRRGFLAR---EQY-RALR----------   52 (193)
T ss_dssp             CEEEEECSBTTTBCHHHHHHHHHHHHST--T------SCCCC-------GGGCCSSCHH---HHH-HHHC----------
T ss_pred             CcEEEEECCCcCccchhHHHHHHHHHhc--C------CCCCC-------HHHHHHhhHH---HHH-HHHh----------
Confidence            4789999999999999999999887765  3      33221       2445655421   111 0100          


Q ss_pred             ccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hC-CCcEEE
Q 029420           82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FA-SSRIYI  157 (193)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~-gi~laV  157 (193)
                                                    +    +..+.+++.|.+.   ......++|||+.++|+   ++ |++++|
T Consensus        53 ------------------------------~----~~~~~~~~~~~~~---~~~~~~~~~~g~~e~L~~L~~~~g~~~~i   95 (193)
T 2i7d_A           53 ------------------------------P----DLADKVASVYEAP---GFFLDLEPIPGALDAVREMNDLPDTQVFI   95 (193)
T ss_dssp             ------------------------------T----THHHHHHHHHTST---TTTTTCCBCTTHHHHHHHHHTSTTEEEEE
T ss_pred             ------------------------------H----HHHHHHHHHHHhc---CccccCccCcCHHHHHHHHHhCCCCeEEE
Confidence                                          0    0112334444321   12335689999999999   66 999999


Q ss_pred             EcCcH--HHHHHHHHHhH
Q 029420          158 VTTKA--VSQMLYYESLQ  173 (193)
Q Consensus       158 vTnK~--~a~~lL~~~~~  173 (193)
                      +||++  .++.+|++++-
T Consensus        96 vT~~~~~~~~~~l~~~gl  113 (193)
T 2i7d_A           96 CTSPLLKYHHCVGEKYRW  113 (193)
T ss_dssp             EECCCSSCTTTHHHHHHH
T ss_pred             EeCCChhhHHHHHHHhCc
Confidence            99998  78888888754

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.38  E-value=4.9e-12  Score=102.94  Aligned_cols=127  Identities=9%  Similarity=0.016  Sum_probs=84.8

Q ss_pred             CceEEEecCcccccChH-HHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            2 ADLYALDFDGVLCDSCG-ESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~-di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      .|+|+||+||||+||-. .+..+.+.+++++      |++..        ...++.+.|.+....+ ...+...      
T Consensus         6 ik~i~fDlDGTLld~~~~~~~~~~~~~l~~~------G~~~~--------~~~~~~~~g~~~~~~~-~~~~~~~------   64 (267)
T 1swv_A            6 IEAVIFAWAGTTVDYGCFAPLEVFMEIFHKR------GVAIT--------AEEARKPMGLLKIDHV-RALTEMP------   64 (267)
T ss_dssp             CCEEEECSBTTTBSTTCCTTHHHHHHHHHTT------TCCCC--------HHHHHTTTTSCHHHHH-HHHHHSH------
T ss_pred             ceEEEEecCCCEEeCCCccHHHHHHHHHHHc------CCCCC--------HHHHHHHhccchHHHH-HHhcccH------
Confidence            58999999999999988 7888999999998      55532        3567788888766554 2222110      


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcC--CCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWS--ENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRI  155 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g--~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~l  155 (193)
                              ..   ..       .+...++  ++.+.+.+....+++.|.+.    ......+|||+.++|+   ++|+++
T Consensus        65 --------~~---~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~g~~~  122 (267)
T 1swv_A           65 --------RI---AS-------EWNRVFRQLPTEADIQEMYEEFEEILFAI----LPRYASPINGVKEVIASLRERGIKI  122 (267)
T ss_dssp             --------HH---HH-------HHHHHHSSCCCHHHHHHHHHHHHHHHHHH----GGGGCCBCTTHHHHHHHHHHTTCEE
T ss_pred             --------HH---HH-------HHHHHhCCCCCHHHHHHHHHHHHHHHHHh----hccccccCccHHHHHHHHHHcCCeE
Confidence                    00   00       0111122  34555555556666555433    2345689999999998   789999


Q ss_pred             EEEcCcH--HHHHHHHHH
Q 029420          156 YIVTTKA--VSQMLYYES  171 (193)
Q Consensus       156 aVvTnK~--~a~~lL~~~  171 (193)
                      +|+||++  .+..+++.+
T Consensus       123 ~i~t~~~~~~~~~~l~~~  140 (267)
T 1swv_A          123 GSTTGYTREMMDIVAKEA  140 (267)
T ss_dssp             EEBCSSCHHHHHHHHHHH
T ss_pred             EEEcCCCHHHHHHHHHHc
Confidence            9999998  777777766

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.37  E-value=1.9e-12  Score=104.67  Aligned_cols=113  Identities=12%  Similarity=0.085  Sum_probs=75.9

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.|+|+||+||||+||.+.+..+...+++++      |.+..        .+.++.+.|.+....+ ...+...      
T Consensus        29 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~-~~~~~~~------   87 (250)
T 3l5k_A           29 PVTHLIFDMDGLLLDTERLYSVVFQEICNRY------DKKYS--------WDVKSLVMGKKALEAA-QIIIDVL------   87 (250)
T ss_dssp             CCSEEEEETBTTTBCHHHHHHHHHHHHHHHT------TCCCC--------HHHHHHHTTCCHHHHH-HHHHHHH------
T ss_pred             CCcEEEEcCCCCcCCCHHHHHHHHHHHHHHh------CCCCC--------HHHHHHhcCCCHHHHH-HHHHHHh------
Confidence            3589999999999999999999999999999      55532        3556777887766554 1222110      


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                            +.                    ..+.+   +....+++.|.+.     .....+|||+.++|+   ++|++++|
T Consensus        88 ------~~--------------------~~~~~---~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~l~~~g~~~~i  133 (250)
T 3l5k_A           88 ------QL--------------------PMSKE---ELVEESQTKLKEV-----FPTAALMPGAEKLIIHLRKHGIPFAL  133 (250)
T ss_dssp             ------TC--------------------SSCHH---HHHHHHHHHHHHH-----GGGCCBCTTHHHHHHHHHHTTCCEEE
T ss_pred             ------CC--------------------CCCHH---HHHHHHHHHHHHH-----hccCCCCCCHHHHHHHHHhCCCcEEE
Confidence                  00                    01122   2223344444332     234789999999999   88999999


Q ss_pred             EcCcH--HHHHHH
Q 029420          158 VTTKA--VSQMLY  168 (193)
Q Consensus       158 vTnK~--~a~~lL  168 (193)
                      +||.+  .+...+
T Consensus       134 ~sn~~~~~~~~~l  146 (250)
T 3l5k_A          134 ATSSRSASFDMKT  146 (250)
T ss_dssp             ECSCCHHHHHHHT
T ss_pred             EeCCCHHHHHHHH
Confidence            99997  444444

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.37  E-value=7.7e-12  Score=100.59  Aligned_cols=118  Identities=13%  Similarity=0.032  Sum_probs=78.7

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.|+|+||+||||+|+-+.+..+...+++++      |.+..        ...++...|......+ ...+...      
T Consensus        23 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~-~~~~~~~------   81 (243)
T 3qxg_A           23 KLKAVLFDMDGVLFNSMPYHSEAWHQVMKTH------GLDLS--------REEAYMHEGRTGASTI-NIVFQRE------   81 (243)
T ss_dssp             CCCEEEECSBTTTBCCHHHHHHHHHHHHHHT------TCCCC--------HHHHHHTTTSCHHHHH-HHHHHHH------
T ss_pred             cCCEEEEcCCCCCCCCHHHHHHHHHHHHHHh------CCCCC--------HHHHHHHhCCCHHHHH-HHHHHHH------
Confidence            3589999999999999999999999999999      55533        1334445554433332 1221110      


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                                      +         ....+.+.+.+....+.++|..      .....+|||+.++|+   ++|++++|
T Consensus        82 ----------------~---------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~l~~~g~~~~i  130 (243)
T 3qxg_A           82 ----------------L---------GKEATQEEIESIYHEKSILFNS------YPEAERMPGAWELLQKVKSEGLTPMV  130 (243)
T ss_dssp             ----------------H---------SSCCCHHHHHHHHHHHHHHHHT------SSCCCBCTTHHHHHHHHHHTTCEEEE
T ss_pred             ----------------h---------CCCCCHHHHHHHHHHHHHHHHh------cccCCCCCCHHHHHHHHHHcCCcEEE
Confidence                            0         0112455555556656555432      235689999999998   88999999


Q ss_pred             EcCcH--HHHHHHHH
Q 029420          158 VTTKA--VSQMLYYE  170 (193)
Q Consensus       158 vTnK~--~a~~lL~~  170 (193)
                      +||++  .+...++.
T Consensus       131 ~t~~~~~~~~~~l~~  145 (243)
T 3qxg_A          131 VTGSGQLSLLERLEH  145 (243)
T ss_dssp             ECCCCCHHHHTTHHH
T ss_pred             EeCCcHHHHHHHHHH
Confidence            99998  56665554

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.36  E-value=2.6e-12  Score=104.30  Aligned_cols=116  Identities=16%  Similarity=0.138  Sum_probs=79.7

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.|+|+|||||||+|+...+..+.+.+++++      |.+...       .+.++.+.|.+....+ ...+...      
T Consensus        27 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~-~~~~~~~------   86 (259)
T 4eek_A           27 PFDAVLFDLDGVLVESEGIIAQVWQSVLAER------GLHLDL-------TEIAMYFTGQRFDGVL-AYLAQQH------   86 (259)
T ss_dssp             CCSEEEEESBTTTEECHHHHHHHHHHHHHHT------TCCCCH-------HHHHHHTTTCCHHHHH-HHHHHHH------
T ss_pred             CCCEEEECCCCCcccCHHHHHHHHHHHHHHh------CCCCCH-------HHHHHHHhCCCHHHHH-HHHHHHc------
Confidence            3589999999999999999999999999999      565432       2446667777766665 1222110      


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                            +.                    ..+.+.+    ..+++.|.+.+     ....+|||+.++|+   ++|++++|
T Consensus        87 ------~~--------------------~~~~~~~----~~~~~~~~~~~-----~~~~~~~~~~~~l~~l~~~g~~~~i  131 (259)
T 4eek_A           87 ------DF--------------------VPPPDFL----DVLETRFNAAM-----TGVTAIEGAAETLRALRAAGVPFAI  131 (259)
T ss_dssp             ------CC--------------------CCCTTHH----HHHHHHHHHHH-----TTCEECTTHHHHHHHHHHHTCCEEE
T ss_pred             ------CC--------------------CCCHHHH----HHHHHHHHHHh-----ccCCcCccHHHHHHHHHHCCCeEEE
Confidence                  00                    0112222    22333443332     35689999999999   77999999


Q ss_pred             EcCcH--HHHHHHHHH
Q 029420          158 VTTKA--VSQMLYYES  171 (193)
Q Consensus       158 vTnK~--~a~~lL~~~  171 (193)
                      +||.+  .++.+++.+
T Consensus       132 ~s~~~~~~~~~~l~~~  147 (259)
T 4eek_A          132 GSNSERGRLHLKLRVA  147 (259)
T ss_dssp             ECSSCHHHHHHHHHHT
T ss_pred             EeCCCHHHHHHHHHhc
Confidence            99998  788888776

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=99.36  E-value=8.8e-13  Score=104.66  Aligned_cols=35  Identities=20%  Similarity=0.267  Sum_probs=30.3

Q ss_pred             CCCCCCCHHHHHH---hC-CCcEEEEcCcH--HHHHHHHHH
Q 029420          137 ANRFYPGIPDALK---FA-SSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~-gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ..++|||+.++|+   ++ |++++|+||++  .++.+++++
T Consensus        73 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~  113 (197)
T 1q92_A           73 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKY  113 (197)
T ss_dssp             TCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHH
T ss_pred             cCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHh
Confidence            4689999999999   77 99999999998  667777766

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.34  E-value=1.2e-11  Score=96.86  Aligned_cols=119  Identities=13%  Similarity=0.058  Sum_probs=76.4

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.|+|+||+||||+|+-+.+..+...+++++      |.+...       .+.++...|......+ ...+..       
T Consensus         8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~-~~~~~~-------   66 (226)
T 1te2_A            8 QILAAIFDMDGLLIDSEPLWDRAELDVMASL------GVDISR-------RNELPDTLGLRIDMVV-DLWYAR-------   66 (226)
T ss_dssp             CCCEEEECCBTTTBCCHHHHHHHHHHHHHHT------TCCGGG-------GGGSCCCTTCCHHHHH-HHHHHH-------
T ss_pred             CCCEEEECCCCCcCcCHHHHHHHHHHHHHHc------CCCCCh-------HHHHHHHhCCCHHHHH-HHHHHH-------
Confidence            4689999999999999999999999999999      554321       2445666776655443 122211       


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                                                 .+++.....+....+++.|.+.+.    ....++||+.++|+   +.|++++|
T Consensus        67 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~l~~~g~~~~i  115 (226)
T 1te2_A           67 ---------------------------QPWNGPSRQEVVERVIARAISLVE----ETRPLLPGVREAVALCKEQGLLVGL  115 (226)
T ss_dssp             ---------------------------SCCSSSCHHHHHHHHHHHHHHHHH----HHCCBCTTHHHHHHHHHHTTCEEEE
T ss_pred             ---------------------------cCCCccCHHHHHHHHHHHHHHHHh----ccCCcCccHHHHHHHHHHCCCcEEE
Confidence                                       011111111222333333333221    23578999999998   78999999


Q ss_pred             EcCcH--HHHHHHHHH
Q 029420          158 VTTKA--VSQMLYYES  171 (193)
Q Consensus       158 vTnK~--~a~~lL~~~  171 (193)
                      +||.+  .++.+++.+
T Consensus       116 ~t~~~~~~~~~~l~~~  131 (226)
T 1te2_A          116 ASASPLHMLEKVLTMF  131 (226)
T ss_dssp             EESSCHHHHHHHHHHT
T ss_pred             EeCCcHHHHHHHHHhc
Confidence            99988  677777665

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.34  E-value=9.7e-12  Score=97.68  Aligned_cols=131  Identities=12%  Similarity=0.079  Sum_probs=76.0

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.|+|+||+||||+|+-+.+..+...+.+.+...   |.+......+......-++++|.|...... .....       
T Consensus         7 mik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------   75 (234)
T 3ddh_A            7 LIKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPY---GTSKEISAALFQTEMNNLQILGYGAKAFTI-SMVET-------   75 (234)
T ss_dssp             TCCEEEECCBTTTBCCHHHHHHHHHHHHHHTGGG---SCHHHHHHHHHHHHHHTHHHHCSSHHHHHH-HHHHH-------
T ss_pred             cccEEEEeCCCCCccCcchHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHhhhhhhhcCCcchhHH-HHHHH-------
Confidence            5799999999999999998888877776666311   311100000000011114667777655421 11100       


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCC-CcEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FAS-SRIY  156 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~g-i~la  156 (193)
                                  ....+         ...++.+.+.+....+++.        ......+|||+.++|+   ++| ++++
T Consensus        76 ------------~~~~~---------~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~l~~~g~~~~~  126 (234)
T 3ddh_A           76 ------------ALQIS---------NGKIAADIIRQIVDLGKSL--------LKMPIELLPGVKETLKTLKETGKYKLV  126 (234)
T ss_dssp             ------------HHHHT---------TTCCCHHHHHHHHHHHHHH--------TTCCCCBCTTHHHHHHHHHHHCCCEEE
T ss_pred             ------------HHHHh---------cCCCCHHHHHHHHHHHHHH--------hhccCCcCccHHHHHHHHHhCCCeEEE
Confidence                        00000         0123444444444433332        2345689999999999   788 9999


Q ss_pred             EEcCcH--HHHHHHHHH
Q 029420          157 IVTTKA--VSQMLYYES  171 (193)
Q Consensus       157 VvTnK~--~a~~lL~~~  171 (193)
                      |+||.+  .++.+++.+
T Consensus       127 i~t~~~~~~~~~~l~~~  143 (234)
T 3ddh_A          127 VATKGDLLDQENKLERS  143 (234)
T ss_dssp             EEEESCHHHHHHHHHHH
T ss_pred             EEeCCchHHHHHHHHHh
Confidence            999988  667777776

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.33  E-value=2.3e-12  Score=102.60  Aligned_cols=111  Identities=12%  Similarity=0.037  Sum_probs=76.9

Q ss_pred             CCceEEEecCcccccChHHHHHHH-HHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSA-VKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSI   79 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~-~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~   79 (193)
                      |.|+|+|||||||+||-+.+..+. +.+++++      |.+.          ..++.+.|.+....+ ...+..      
T Consensus        24 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~------g~~~----------~~~~~~~g~~~~~~~-~~~~~~------   80 (231)
T 3kzx_A           24 QPTAVIFDWYNTLIDTSINIDRTTFYQVLDQM------GYKN----------IDLDSIPNSTIPKYL-ITLLGK------   80 (231)
T ss_dssp             CCSEEEECTBTTTEETTSSCCHHHHHHHHHHT------TCCC----------CCCTTSCTTTHHHHH-HHHHGG------
T ss_pred             CCCEEEECCCCCCcCCchhHHHHHHHHHHHHc------CCCH----------HHHHHHhCccHHHHH-HHHhCc------
Confidence            358999999999999999999999 9999999      4442          335556666655444 122210      


Q ss_pred             ccccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEE
Q 029420           80 RKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIY  156 (193)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~la  156 (193)
                                                        ........|++.+..   ........++||+.++|+   ++|++++
T Consensus        81 ----------------------------------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~l~~~g~~~~  123 (231)
T 3kzx_A           81 ----------------------------------RWKEATILYENSLEK---SQKSDNFMLNDGAIELLDTLKENNITMA  123 (231)
T ss_dssp             ----------------------------------GHHHHHHHHHHHHHH---CCSCCCCEECTTHHHHHHHHHHTTCEEE
T ss_pred             ----------------------------------hHHHHHHHHHHHHhh---hcccccceECcCHHHHHHHHHHCCCeEE
Confidence                                              011222334444331   233456789999999999   8899999


Q ss_pred             EEcCcH--HHHHHHHHH
Q 029420          157 IVTTKA--VSQMLYYES  171 (193)
Q Consensus       157 VvTnK~--~a~~lL~~~  171 (193)
                      |+||.+  .++.+++.+
T Consensus       124 i~T~~~~~~~~~~l~~~  140 (231)
T 3kzx_A          124 IVSNKNGERLRSEIHHK  140 (231)
T ss_dssp             EEEEEEHHHHHHHHHHT
T ss_pred             EEECCCHHHHHHHHHHC
Confidence            999998  788888776

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.33  E-value=8.4e-12  Score=97.68  Aligned_cols=116  Identities=17%  Similarity=0.132  Sum_probs=77.9

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK   81 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~   81 (193)
                      .|+|+||+||||+|+-+.+..+...+++++      |.+..+       .+.++.++|.+....+ ...+..        
T Consensus         6 ~k~v~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~-~~~~~~--------   63 (225)
T 3d6j_A            6 YTVYLFDFDYTLADSSRGIVTCFRSVLERH------GYTGIT-------DDMIKRTIGKTLEESF-SILTGI--------   63 (225)
T ss_dssp             CSEEEECCBTTTEECHHHHHHHHHHHHHHT------TCCCCC-------HHHHHTTTTSCHHHHH-HHHHCC--------
T ss_pred             CCEEEEeCCCCCCCCHHHHHHHHHHHHHHh------CCCCCC-------HHHHHHHhCCcHHHHH-HHHcCC--------
Confidence            699999999999999999999999999999      454332       2456677787766554 122210        


Q ss_pred             ccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEE
Q 029420           82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIV  158 (193)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVv  158 (193)
                           .                       +.+........+...|.+    .+.....++||+.++|+   +.|++++|+
T Consensus        64 -----~-----------------------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~~~g~~~~i~  111 (225)
T 3d6j_A           64 -----T-----------------------DADQLESFRQEYSKEADI----YMNANTILFPDTLPTLTHLKKQGIRIGII  111 (225)
T ss_dssp             -----C-----------------------CHHHHHHHHHHHHHHHHH----HTGGGCEECTTHHHHHHHHHHHTCEEEEE
T ss_pred             -----C-----------------------CHHHHHHHHHHHHHHHHH----hccccCccCcCHHHHHHHHHHCCCeEEEE
Confidence                 0                       111122222333333332    23345678999999998   789999999


Q ss_pred             cCcH--HHHHHHHHH
Q 029420          159 TTKA--VSQMLYYES  171 (193)
Q Consensus       159 TnK~--~a~~lL~~~  171 (193)
                      ||.+  .++.+++.+
T Consensus       112 s~~~~~~~~~~~~~~  126 (225)
T 3d6j_A          112 STKYRFRILSFLRNH  126 (225)
T ss_dssp             CSSCHHHHHHHHHTS
T ss_pred             ECCCHHHHHHHHHHc
Confidence            9987  667776654

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.31  E-value=8.1e-12  Score=100.52  Aligned_cols=32  Identities=19%  Similarity=0.256  Sum_probs=29.5

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRW   32 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~   32 (193)
                      |.|+|+|||||||+||.+.+..+.+.++++++
T Consensus         1 m~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~   32 (241)
T 2hoq_A            1 MVKVIFFDLDDTLVDTSKLAEIARKNAIENMI   32 (241)
T ss_dssp             CCCEEEECSBTTTBCHHHHHHHHHHHHHHHHH
T ss_pred             CccEEEEcCCCCCCCChhhHHHHHHHHHHHHH
Confidence            78999999999999999999999999998883

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.31  E-value=1.3e-11  Score=94.93  Aligned_cols=113  Identities=17%  Similarity=0.177  Sum_probs=74.1

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhh-ccHHHHHHHHHHhhhccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVE-TGYENLLLVRLLLEIRMPSI   79 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig-~G~~~ll~~~~l~~~~~~~~   79 (193)
                      |.|+|+||+||||+|+-+.+..+.+.+++++      |.+..        ...+|...| .+...++  +.+..      
T Consensus         3 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~~--~~~~~------   60 (207)
T 2go7_A            3 QKTAFIWDLDGTLLDSYEAILSGIEETFAQF------SIPYD--------KEKVREFIFKYSVQDLL--VRVAE------   60 (207)
T ss_dssp             -CCEEEECTBTTTEECHHHHHHHHHHHHHHH------TCCCC--------HHHHHHHHHHSCHHHHH--HHHHH------
T ss_pred             cccEEEEeCCCcccccHHHHHHHHHHHHHHc------CCCCC--------HHHHHHHHccccHHHHH--HHhhc------
Confidence            4799999999999999999999999999999      45322        255677777 5544443  11110      


Q ss_pred             ccccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEE
Q 029420           80 RKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIY  156 (193)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~la  156 (193)
                                                 ..+++.    +....+...+.+    .......++||+.++|+   +.|++++
T Consensus        61 ---------------------------~~~~~~----~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~~~g~~~~  105 (207)
T 2go7_A           61 ---------------------------DRNLDV----EVLNQVRAQSLA----EKNAQVVLMPGAREVLAWADESGIQQF  105 (207)
T ss_dssp             ---------------------------HHTCCH----HHHHHHHHHHHT----TCGGGCEECTTHHHHHHHHHHTTCEEE
T ss_pred             ---------------------------hhhccH----HHHHHHHHHHHH----hccccceeCcCHHHHHHHHHHCCCeEE
Confidence                                       001111    112233333322    22345678999999999   7899999


Q ss_pred             EEcCcH--HHHHHHHHH
Q 029420          157 IVTTKA--VSQMLYYES  171 (193)
Q Consensus       157 VvTnK~--~a~~lL~~~  171 (193)
                      |+||.+  ... .++.+
T Consensus       106 i~s~~~~~~~~-~~~~~  121 (207)
T 2go7_A          106 IYTHKGNNAFT-ILKDL  121 (207)
T ss_dssp             EECSSCTHHHH-HHHHH
T ss_pred             EEeCCchHHHH-HHHHc
Confidence            999988  555 66654

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.29  E-value=1.9e-11  Score=101.00  Aligned_cols=35  Identities=9%  Similarity=0.031  Sum_probs=30.5

Q ss_pred             CCCCCCCHHHHHH--hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          137 ANRFYPGIPDALK--FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       137 ~~~lypGV~e~L~--~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ..++|||+.++|+  .++++++|+||++  .++.+|+++
T Consensus       119 ~~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~  157 (260)
T 2gfh_A          119 HMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEAC  157 (260)
T ss_dssp             TCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHH
T ss_pred             cCCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHhc
Confidence            4689999999999  5679999999999  778888876

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.29  E-value=1.2e-11  Score=95.41  Aligned_cols=108  Identities=13%  Similarity=0.199  Sum_probs=69.7

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhh-ccHHHHHHHHHHhhhcccccc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVE-TGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig-~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      .|+|+||+||||+||-+.+..+.+.+++++      |.+..        .+.++..++ .+...+.  +.+..       
T Consensus         6 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~~~~~~~~~~--~~~~~-------   62 (190)
T 2fi1_A            6 YHDYIWDLGGTLLDNYETSTAAFVETLALY------GITQD--------HDSVYQALKVSTPFAIE--TFAPN-------   62 (190)
T ss_dssp             CSEEEECTBTTTBCHHHHHHHHHHHHHHHT------TCCCC--------HHHHHHHHHHCHHHHHH--HHCTT-------
T ss_pred             ccEEEEeCCCCcCCCHHHHHHHHHHHHHHh------CCCCC--------HHHHHHHHccccHHHHH--HHhhh-------
Confidence            589999999999999999999999999999      45422        133444432 3222221  11100       


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                                                    . .   .....+.+.|.+.    .. ...+|||+.++|+   ++|++++|
T Consensus        63 ------------------------------~-~---~~~~~~~~~~~~~----~~-~~~~~~~~~~~l~~l~~~g~~~~i  103 (190)
T 2fi1_A           63 ------------------------------L-E---NFLEKYKENEARE----LE-HPILFEGVSDLLEDISNQGGRHFL  103 (190)
T ss_dssp             ------------------------------C-T---THHHHHHHHHHHH----TT-SCCBCTTHHHHHHHHHHTTCEEEE
T ss_pred             ------------------------------H-H---HHHHHHHHHHHHh----cC-cCccCcCHHHHHHHHHHCCCcEEE
Confidence                                          0 0   0112233333332    12 2349999999999   78999999


Q ss_pred             EcCcH-HHHHHHHHH
Q 029420          158 VTTKA-VSQMLYYES  171 (193)
Q Consensus       158 vTnK~-~a~~lL~~~  171 (193)
                      +||++ .++.+++.+
T Consensus       104 ~t~~~~~~~~~l~~~  118 (190)
T 2fi1_A          104 VSHRNDQVLEILEKT  118 (190)
T ss_dssp             ECSSCTHHHHHHHHT
T ss_pred             EECCcHHHHHHHHHc
Confidence            99998 777777765

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.28  E-value=2.7e-11  Score=95.98  Aligned_cols=128  Identities=12%  Similarity=0.091  Sum_probs=74.2

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK   81 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~   81 (193)
                      .|+|+||+||||+|+.+.+..+.+.+++++      |.+...        ...+.+.+.+....   ..+...       
T Consensus         7 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~--------~~~~~~~~~~~~~~---~~~~~~-------   62 (238)
T 3ed5_A            7 YRTLLFDVDDTILDFQAAEALALRLLFEDQ------NIPLTN--------DMKAQYKTINQGLW---RAFEEG-------   62 (238)
T ss_dssp             CCEEEECCBTTTBCHHHHHHHHHHHHHHHT------TCCCCH--------HHHHHHHHHHHHHH---HHHHTT-------
T ss_pred             CCEEEEcCcCcCcCCchhHHHHHHHHHHHc------CCCcch--------HHHHHHHHHHHHHH---HHHHhc-------
Confidence            589999999999999999999999999999      565432        22333333221111   111110       


Q ss_pred             ccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEE
Q 029420           82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIV  158 (193)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVv  158 (193)
                           ..+.....   ......+.+.+|++.. .    ..+.+.|.+.    ......+|||+.++|+   ++ ++++|+
T Consensus        63 -----~~~~~~~~---~~~~~~~~~~~~~~~~-~----~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~-~~~~i~  124 (238)
T 3ed5_A           63 -----KMTRDEVV---NTRFSALLKEYGYEAD-G----ALLEQKYRRF----LEEGHQLIDGAFDLISNLQQQ-FDLYIV  124 (238)
T ss_dssp             -----SSCHHHHH---HHHHHHHHHHTTCCCC-H----HHHHHHHHHH----HTTCCCBCTTHHHHHHHHHTT-SEEEEE
T ss_pred             -----cCCHHHHH---HHHHHHHHHHcCCCCc-H----HHHHHHHHHH----HHhcCCCCccHHHHHHHHHhc-CeEEEE
Confidence                 11111110   0011222333344321 1    1222333322    2234689999999999   55 999999


Q ss_pred             cCcH--HHHHHHHHH
Q 029420          159 TTKA--VSQMLYYES  171 (193)
Q Consensus       159 TnK~--~a~~lL~~~  171 (193)
                      ||++  .++.+++.+
T Consensus       125 t~~~~~~~~~~l~~~  139 (238)
T 3ed5_A          125 TNGVSHTQYKRLRDS  139 (238)
T ss_dssp             ECSCHHHHHHHHHHT
T ss_pred             eCCCHHHHHHHHHHc
Confidence            9998  777777775

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.28  E-value=3.8e-12  Score=101.65  Aligned_cols=30  Identities=13%  Similarity=-0.037  Sum_probs=28.5

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .++|+||+||||+||.+.+..+.+.+++++
T Consensus         3 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~   32 (220)
T 2zg6_A            3 YKAVLVDFGNTLVGFKPVFYEKVYQVLKDN   32 (220)
T ss_dssp             CCEEEECSBTTTEEEEETTHHHHHHHHHHT
T ss_pred             ceEEEEcCCCceecccccHHHHHHHHHHHh
Confidence            589999999999999999999999999999

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.28  E-value=5.2e-11  Score=94.21  Aligned_cols=136  Identities=10%  Similarity=0.016  Sum_probs=79.3

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.|+|+||+||||+|+-+.+..+.+.+++++      |++...    .......+.+.+.+....   ..+...      
T Consensus         4 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~------   64 (240)
T 3qnm_A            4 KYKNLFFDLDDTIWAFSRNARDTFEEVYQKY------SFDRYF----DSFDHYYTLYQRRNTELW---LEYGEG------   64 (240)
T ss_dssp             CCSEEEECCBTTTBCHHHHHHHHHHHHHHHT------TGGGTS----SSHHHHHHHHHHHHHHHH---HHHHTT------
T ss_pred             CceEEEEcCCCCCcCchhhHHHHHHHHHHHc------CCCccc----CCHHHHHHHHHHHHHHHH---HHHhcC------
Confidence            3699999999999999999999999999999      554310    001122233333221111   111100      


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH--hCCCcEEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIYIV  158 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~--~~gi~laVv  158 (193)
                            ....+...   ......+++.+|++.+   +....+.+.|.+.    +.....+|||+.++|+  .+|++++|+
T Consensus        65 ------~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~g~~~~i~  128 (240)
T 3qnm_A           65 ------KVTKEELN---RQRFFYPLQAVGVEDE---ALAERFSEDFFAI----IPTKSGLMPHAKEVLEYLAPQYNLYIL  128 (240)
T ss_dssp             ------SSCHHHHH---HHHHHHHHHHTTCCCH---HHHHHHHHHHHHH----GGGCCCBSTTHHHHHHHHTTTSEEEEE
T ss_pred             ------CCCHHHHH---HHHHHHHHHHcCCCcH---HHHHHHHHHHHHH----hhhcCCcCccHHHHHHHHHcCCeEEEE
Confidence                  11111111   0112334444555422   2233344444433    2345689999999999  789999999


Q ss_pred             cCcH--HHHHHHHHH
Q 029420          159 TTKA--VSQMLYYES  171 (193)
Q Consensus       159 TnK~--~a~~lL~~~  171 (193)
                      ||.+  .++.+++.+
T Consensus       129 sn~~~~~~~~~l~~~  143 (240)
T 3qnm_A          129 SNGFRELQSRKMRSA  143 (240)
T ss_dssp             ECSCHHHHHHHHHHH
T ss_pred             eCCchHHHHHHHHHc
Confidence            9987  777777766

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.27  E-value=6.3e-11  Score=93.71  Aligned_cols=128  Identities=16%  Similarity=0.136  Sum_probs=75.8

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.|+|+||+||||+|+-+.+..+...+.+.++..   +..             +....|..+..+.  ..+... .+.  
T Consensus         1 mik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~---~~~-------------~~~~~~~~~~~~~--~~~~~~-~~~--   59 (230)
T 3vay_A            1 MIKLVTFDLDDTLWDTAPAIVGAEAALRDWLAEQ---APK-------------LGPVPVEHLWEIR--SRLLDE-DPS--   59 (230)
T ss_dssp             CCCEEEECCBTTTBCSHHHHHHHHHHHHHHHHHH---CTT-------------TCSCCHHHHHHHH--HHHHHH-CGG--
T ss_pred             CeeEEEecCcccCcCCchHHHHHHHHHHHHHHHh---cCc-------------chhhHHHHHHHHH--HHHHHh-Ccc--
Confidence            8899999999999999988888777766666210   100             0111122222221  111110 000  


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH--hCCCcEEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIYIV  158 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~--~~gi~laVv  158 (193)
                           ...+..   ..+......++..+|++.+...+....+.+.|.+.     .....+|||+.++|+  ...++++|+
T Consensus        60 -----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~l~~~~~~~i~  126 (230)
T 3vay_A           60 -----FKHRIS---ALRRRVLFHALEDAGYDSDEAQQLADESFEVFLHG-----RHQVQIFPEVQPTLEILAKTFTLGVI  126 (230)
T ss_dssp             -----GGGCHH---HHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH-----HTCCCBCTTHHHHHHHHHTTSEEEEE
T ss_pred             -----ccccHH---HHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHHHh-----hccCccCcCHHHHHHHHHhCCeEEEE
Confidence                 000111   11112334455667888887777777777776553     235689999999999  444999999


Q ss_pred             cCcH
Q 029420          159 TTKA  162 (193)
Q Consensus       159 TnK~  162 (193)
                      ||.+
T Consensus       127 t~~~  130 (230)
T 3vay_A          127 TNGN  130 (230)
T ss_dssp             ESSC
T ss_pred             ECCc
Confidence            9987

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.26  E-value=8.1e-12  Score=99.53  Aligned_cols=36  Identities=8%  Similarity=0.234  Sum_probs=32.0

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      ..++|||+.++|+   ++|++++|+||++  .++.++++++
T Consensus        84 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~g  124 (225)
T 1nnl_A           84 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLN  124 (225)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTT
T ss_pred             cCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcC
Confidence            3589999999999   8899999999998  8888888763

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.26  E-value=1.1e-10  Score=94.35  Aligned_cols=127  Identities=10%  Similarity=0.006  Sum_probs=74.0

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCc---chhhhhhhhhhhcc--chhhccHHHHHHHHHHhhhcc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDS---VIEDWIVDQMHILR--PVVETGYENLLLVRLLLEIRM   76 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~---~~~~~~~~~~~~vr--~~Ig~G~~~ll~~~~l~~~~~   76 (193)
                      .|+|+|||||||+||-+.+..+.+.+++.+...   |.+.   ... .+.  ...++  ...|.+...+. ...+..   
T Consensus        13 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~l~~~---g~~~~~~~~~-~~~--~~~~~~~~~~g~~~~~~~-~~~~~~---   82 (251)
T 2pke_A           13 IQLVGFDGDDTLWKSEDYYRTAEADFEAILSGY---LDLGDSRMQQ-HLL--AVERRNLKIFGYGAKGMT-LSMIET---   82 (251)
T ss_dssp             CCEEEECCBTTTBCCHHHHHHHHHHHHHHHTTT---CCC-----CT-THH--HHHHHHHHHHCSSHHHHH-HHHHHH---
T ss_pred             eeEEEEeCCCCCccCcHhHHHHHHHHHHHHHHh---CCchhHHHHH-HHH--HHHhhhhhhccCcchHHH-HHHHHH---
Confidence            589999999999999999999988888655211   4543   110 000  11222  35677765544 111100   


Q ss_pred             cccccccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH--hCCCc
Q 029420           77 PSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSR  154 (193)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~--~~gi~  154 (193)
                                      ....+.         ...+.+    ....+.+.|.+.    ......+|||+.++|+  .+|++
T Consensus        83 ----------------~~~~~~---------~~~~~~----~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~~~  129 (251)
T 2pke_A           83 ----------------AIELTE---------ARIEAR----DIQRIVEIGRAT----LQHPVEVIAGVREAVAAIAADYA  129 (251)
T ss_dssp             ----------------HHHHTT---------TCCCHH----HHHHHHHHHHHH----HTCCCCBCTTHHHHHHHHHTTSE
T ss_pred             ----------------HHHhcC---------CCCChH----HHHHHHHHHHHH----HhccCCcCccHHHHHHHHHCCCE
Confidence                            000000         001222    222333333332    2345689999999999  78899


Q ss_pred             EEEEcCcH--HHHHHHHHH
Q 029420          155 IYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       155 laVvTnK~--~a~~lL~~~  171 (193)
                      ++|+||++  .++..++.+
T Consensus       130 ~~i~t~~~~~~~~~~l~~~  148 (251)
T 2pke_A          130 VVLITKGDLFHQEQKIEQS  148 (251)
T ss_dssp             EEEEEESCHHHHHHHHHHH
T ss_pred             EEEEeCCCHHHHHHHHHHc
Confidence            99999998  677777765

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.23  E-value=2.6e-12  Score=107.98  Aligned_cols=36  Identities=8%  Similarity=0.082  Sum_probs=31.9

Q ss_pred             cCCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          136 GANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       136 ~~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ...++|||+.++|+   ++|++++|+||++  .++.+++.+
T Consensus       160 ~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~  200 (287)
T 3a1c_A          160 VSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL  200 (287)
T ss_dssp             EECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH
T ss_pred             eccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence            34689999999999   8999999999998  788888876

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.22  E-value=2.5e-11  Score=96.86  Aligned_cols=135  Identities=9%  Similarity=-0.075  Sum_probs=78.2

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK   81 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~   81 (193)
                      .|+|+||+||||+|+-+.+..+.+.+++++      |++...       .+.++.++|......  .+..... .+    
T Consensus        15 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~~~~~~~~~~~~~--~~~~~~~-~~----   74 (254)
T 3umg_A           15 VRAVLFDTFGTVVDWRTGIATAVADYAARH------QLEVDA-------VAFADRWRARYQPSM--DAILSGA-RE----   74 (254)
T ss_dssp             CCEEEECCBTTTBCHHHHHHHHHHHHHHHT------TCCCCH-------HHHHHHHHTTHHHHH--HHHHTTS-SC----
T ss_pred             ceEEEEeCCCceecCchHHHHHHHHHHHHh------cCCCCH-------HHHHHHHHHhHHHHH--HHHHhcC-CC----
Confidence            589999999999999999999999999999      565432       244556666432222  1222110 00    


Q ss_pred             ccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH--hCCCcEEEEc
Q 029420           82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIYIVT  159 (193)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~--~~gi~laVvT  159 (193)
                           ..+...   .+......+.+.++.+.+.+.   ....+.+.+.     .....+|||+.++|+  ..+++++|+|
T Consensus        75 -----~~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-----~~~~~~~~~~~~~l~~l~~~~~~~i~t  138 (254)
T 3umg_A           75 -----FVTLDI---LHRENLDFVLRESGIDPTNHD---SGELDELARA-----WHVLTPWPDSVPGLTAIKAEYIIGPLS  138 (254)
T ss_dssp             -----CCCHHH---HHHHHHHHHHHHTTCCGGGSC---HHHHHHHHGG-----GGSCCBCTTHHHHHHHHHHHSEEEECS
T ss_pred             -----CCCHHH---HHHHHHHHHHHHhCCCcCcCC---HHHHHHHHHH-----HhhCcCCcCHHHHHHHHHhCCeEEEEe
Confidence                 001111   111122333444444211111   1111222222     235689999999998  3349999999


Q ss_pred             CcH--HHHHHHHHHh
Q 029420          160 TKA--VSQMLYYESL  172 (193)
Q Consensus       160 nK~--~a~~lL~~~~  172 (193)
                      |++  .++.+++.+.
T Consensus       139 ~~~~~~~~~~l~~~~  153 (254)
T 3umg_A          139 NGNTSLLLDMAKNAG  153 (254)
T ss_dssp             SSCHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHhCC
Confidence            998  7778888764

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.20  E-value=1.2e-10  Score=91.72  Aligned_cols=31  Identities=19%  Similarity=0.020  Sum_probs=28.9

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      |.|+|+||+||||+|+-+.+..+.+.+++++
T Consensus         3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~   33 (235)
T 2om6_A            3 EVKLVTFDVWNTLLDLNIMLDEFSHQLAKIS   33 (235)
T ss_dssp             CCCEEEECCBTTTBCHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEeCCCCCCCcchhHHHHHHHHHHHc
Confidence            4699999999999999999999999999999

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.20  E-value=6.5e-11  Score=95.01  Aligned_cols=133  Identities=8%  Similarity=-0.058  Sum_probs=76.6

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.|+|+||+||||+|+-+.+..+...+++++      |++...       .+..+.++|..... + .+.+... .+   
T Consensus        21 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~~~~~~~~~~~~-~-~~~~~~~-~~---   81 (254)
T 3umc_A           21 GMRAILFDVFGTLVDWRSSLIEQFQALEREL------GGTLPC-------VELTDRWRQQYKPA-M-DRVRNGQ-AP---   81 (254)
T ss_dssp             SCCEEEECCBTTTEEHHHHHHHHHHHHHHHS------SSCCCH-------HHHHHHHHHHTHHH-H-HHHHTTS-SC---
T ss_pred             CCcEEEEeCCCccEecCccHHHHHHHHHHHh------cCCCCH-------HHHHHHHHHHHHHH-H-HHHhccc-CC---
Confidence            4689999999999999999999999999999      565432       23345555532221 1 1222110 00   


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH--hCCCcEEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIYIV  158 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~--~~gi~laVv  158 (193)
                            ......   .+......+...++....      ....+.+.+.     ....++|||+.++|+  ..+++++|+
T Consensus        82 ------~~~~~~---~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-----~~~~~~~~~~~~~l~~l~~~~~~~i~  141 (254)
T 3umc_A           82 ------WQHLDQ---LHRQSLEALAGEFGLALD------EALLQRITGF-----WHRLRPWPDTLAGMHALKADYWLAAL  141 (254)
T ss_dssp             ------CCCHHH---HHHHHHHHHHHHTTCCCC------HHHHHHHHGG-----GGSCEECTTHHHHHHHHTTTSEEEEC
T ss_pred             ------cccHHH---HHHHHHHHHHHHhCCCCC------HHHHHHHHHH-----HhcCCCCccHHHHHHHHHhcCeEEEE
Confidence                  001110   111112233333443211      0011122221     234689999999999  556999999


Q ss_pred             cCcH--HHHHHHHHHh
Q 029420          159 TTKA--VSQMLYYESL  172 (193)
Q Consensus       159 TnK~--~a~~lL~~~~  172 (193)
                      ||++  .++.+++.+.
T Consensus       142 s~~~~~~~~~~l~~~g  157 (254)
T 3umc_A          142 SNGNTALMLDVARHAG  157 (254)
T ss_dssp             CSSCHHHHHHHHHHHT
T ss_pred             eCCCHHHHHHHHHHcC
Confidence            9988  7778887764

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.20  E-value=6.9e-11  Score=98.51  Aligned_cols=35  Identities=17%  Similarity=0.278  Sum_probs=30.4

Q ss_pred             cCCCCCCCHHHHHHhCCCcEEEEcCcH--HHHHHHHHH
Q 029420          136 GANRFYPGIPDALKFASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       136 ~~~~lypGV~e~L~~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ...++||||.++|+. |++++|+||++  .++.+++++
T Consensus       122 ~~~~~~pgv~e~L~~-g~~l~i~Tn~~~~~~~~~l~~~  158 (253)
T 2g80_A          122 IKAPVYADAIDFIKR-KKRVFIYSSGSVKAQKLLFGYV  158 (253)
T ss_dssp             CCBCCCHHHHHHHHH-CSCEEEECSSCHHHHHHHHHSB
T ss_pred             ccCCCCCCHHHHHHc-CCEEEEEeCCCHHHHHHHHHhh
Confidence            356899999999988 99999999999  777777764

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.17  E-value=5.3e-11  Score=93.32  Aligned_cols=115  Identities=17%  Similarity=0.163  Sum_probs=67.0

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.++|+|||||||+|+-+.+.   +.+++++      |.+..        .+.++.+.|.|....+. +.          
T Consensus         4 m~k~iiFDlDGTL~d~~~~~~---~~~~~~~------g~~~~--------~~~~~~~~~~~~~~~~~-~g----------   55 (211)
T 2i6x_A            4 MIRNIVFDLGGVLIHLNREES---IRRFKAI------GVADI--------EEMLDPYLQKGLFLDLE-SG----------   55 (211)
T ss_dssp             CCSEEEECSBTTTEEECHHHH---HHHHHHT------TCTTH--------HHHTCC---CCHHHHHH-HS----------
T ss_pred             cceEEEEeCCCeeEecchHHH---HHHHHHh------CCchH--------HHHHHHHhCchHHHHHH-cC----------
Confidence            679999999999999998765   6677788      45432        25567788877555441 10          


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcC--CCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH--hCCCcEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWS--ENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIY  156 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g--~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~--~~gi~la  156 (193)
                            ..+..+...       .+...++  .+.+       .+.+.|.    .   ....+|||+.++|+  .+|++++
T Consensus        56 ------~~~~~~~~~-------~~~~~~~~~~~~~-------~~~~~~~----~---~~~~~~~~~~~~l~~l~~g~~~~  108 (211)
T 2i6x_A           56 ------RKSEEEFRT-------ELSRYIGKELTYQ-------QVYDALL----G---FLEEISAEKFDYIDSLRPDYRLF  108 (211)
T ss_dssp             ------SSCHHHHHH-------HHHHHHTSCCCHH-------HHHHHHG----G---GEEEECHHHHHHHHHHTTTSEEE
T ss_pred             ------CCCHHHHHH-------HHHHHhCCCCCHH-------HHHHHHH----H---hhcccChHHHHHHHHHHcCCeEE
Confidence                  011111111       1111122  1111       1112221    1   12478999999999  4499999


Q ss_pred             EEcCcH--HHHHHHHH
Q 029420          157 IVTTKA--VSQMLYYE  170 (193)
Q Consensus       157 VvTnK~--~a~~lL~~  170 (193)
                      |+||++  .++.+++.
T Consensus       109 i~t~~~~~~~~~~~~~  124 (211)
T 2i6x_A          109 LLSNTNPYVLDLAMSP  124 (211)
T ss_dssp             EEECCCHHHHHHHTST
T ss_pred             EEeCCCHHHHHHHHhh
Confidence            999998  66666665

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.17  E-value=5.7e-11  Score=97.54  Aligned_cols=137  Identities=12%  Similarity=0.124  Sum_probs=75.9

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK   81 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~   81 (193)
                      .|+|+||+||||+|+...+..+...+++++      |.+...        +.++...+.....+-  ..+...       
T Consensus         1 ik~iiFDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~--------~~~~~~~~~~~~~~~--~~~~~~-------   57 (263)
T 3k1z_A            1 MRLLTWDVKDTLLRLRHPLGEAYATKARAH------GLEVEP--------SALEQGFRQAYRAQS--HSFPNY-------   57 (263)
T ss_dssp             CCEEEECCBTTTEEESSCHHHHHHHHHHHT------TCCCCH--------HHHHHHHHHHHHHHH--HHSTGG-------
T ss_pred             CcEEEEcCCCceeCCCCCHHHHHHHHHHHh------CCCCCH--------HHHHHHHHHHHHHhh--hhcccc-------
Confidence            379999999999999988888999999999      555321        223333322221111  111000       


Q ss_pred             ccccccccHHHHhhhhcchhhhhhhhcCC-CHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           82 SSVSEGLTVEGILENWSKIKPVIMEDWSE-NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~-~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                       ....+.....   .|..+........|. +.+.+.+....+...|   +..   ...++|||+.++|+   ++|++++|
T Consensus        58 -~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~l~~l~~~g~~~~i  127 (263)
T 3k1z_A           58 -GLSHGLTSRQ---WWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDF---SHP---CTWQVLDGAEDTLRECRTRGLRLAV  127 (263)
T ss_dssp             -GGGGTCCHHH---HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT---TSG---GGEEECTTHHHHHHHHHHTTCEEEE
T ss_pred             -ccccCCCHHH---HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHh---cCc---ccceECcCHHHHHHHHHhCCCcEEE
Confidence             0000111111   111122233333343 3333333333333222   111   12479999999999   88999999


Q ss_pred             EcCcH-HHHHHHHHH
Q 029420          158 VTTKA-VSQMLYYES  171 (193)
Q Consensus       158 vTnK~-~a~~lL~~~  171 (193)
                      +||++ .+..+++.+
T Consensus       128 ~tn~~~~~~~~l~~~  142 (263)
T 3k1z_A          128 ISNFDRRLEGILGGL  142 (263)
T ss_dssp             EESCCTTHHHHHHHT
T ss_pred             EeCCcHHHHHHHHhC
Confidence            99988 777888876

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.16  E-value=7.1e-10  Score=87.34  Aligned_cols=117  Identities=16%  Similarity=0.125  Sum_probs=72.9

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.|+|+||+||||+|+-+.+..+.+.+++++      |.+...       ....+.+.|......+ ...+...      
T Consensus         3 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~-~~~~~~~------   62 (229)
T 2fdr_A            3 GFDLIIFDCDGVLVDSEIIAAQVESRLLTEA------GYPISV-------EEMGERFAGMTWKNIL-LQVESEA------   62 (229)
T ss_dssp             CCSEEEECSBTTTBCCHHHHHHHHHHHHHHT------TCCCCH-------HHHHHHHTTCCHHHHH-HHHHHHH------
T ss_pred             CccEEEEcCCCCcCccHHHHHHHHHHHHHHh------CCCCCH-------HHHHHHHhCCCHHHHH-HHHHHHc------
Confidence            3589999999999999999999999999999      554321       2345566666655544 1222110      


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHHhCCCcEEEEcC
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTT  160 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~~~gi~laVvTn  160 (193)
                            +.                    ..+.+.    ...+.+.|.+.+    .....+|||+.++|+....+++|+||
T Consensus        63 ------~~--------------------~~~~~~----~~~~~~~~~~~~----~~~~~~~~~~~~~l~~l~~~~~i~s~  108 (229)
T 2fdr_A           63 ------SI--------------------PLSASL----LDKSEKLLDMRL----ERDVKIIDGVKFALSRLTTPRCICSN  108 (229)
T ss_dssp             ------CC--------------------CCCTHH----HHHHHHHHHHHH----HHHCCBCTTHHHHHHHCCSCEEEEES
T ss_pred             ------CC--------------------CCCHHH----HHHHHHHHHHHh----hcCCccCcCHHHHHHHhCCCEEEEEC
Confidence                  00                    001111    122233333221    12357899999999933349999999


Q ss_pred             cH--HHHHHHHHH
Q 029420          161 KA--VSQMLYYES  171 (193)
Q Consensus       161 K~--~a~~lL~~~  171 (193)
                      .+  .++.+++++
T Consensus       109 ~~~~~~~~~l~~~  121 (229)
T 2fdr_A          109 SSSHRLDMMLTKV  121 (229)
T ss_dssp             SCHHHHHHHHHHT
T ss_pred             CChhHHHHHHHhC
Confidence            87  777777776

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.15  E-value=1.6e-10  Score=92.20  Aligned_cols=34  Identities=15%  Similarity=0.025  Sum_probs=30.9

Q ss_pred             CCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          139 RFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       139 ~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      .+|||+.++|+   ++|++++|+||++  .++.++++++
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g  130 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFG  130 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTT
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcC
Confidence            68999999999   8999999999998  8889988874

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.13  E-value=1.5e-10  Score=95.78  Aligned_cols=113  Identities=11%  Similarity=0.037  Sum_probs=70.8

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK   81 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~   81 (193)
                      .|+|+||+||||+||-+.+..+.+.+++++      |....        ...++...|......+ ...+..        
T Consensus        35 ik~iifDlDGTLlds~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~G~~~~~~~-~~~~~~--------   91 (275)
T 2qlt_A           35 INAALFDVDGTIIISQPAIAAFWRDFGKDK------PYFDA--------EHVIHISHGWRTYDAI-AKFAPD--------   91 (275)
T ss_dssp             ESEEEECCBTTTEECHHHHHHHHHHHHTTC------TTCCH--------HHHHHHCTTCCHHHHH-HHHCGG--------
T ss_pred             CCEEEECCCCCCCCCHHHHHHHHHHHHHHc------CCCCH--------HHHHHHhcCCCHHHHH-HHHhcc--------
Confidence            489999999999999999998888888888      42111        1223444565544433 111100        


Q ss_pred             ccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hC-CCcEEE
Q 029420           82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FA-SSRIYI  157 (193)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~-gi~laV  157 (193)
                                                 ....+.    ...+...|.+.    ......++||+.++|+   +. |++++|
T Consensus        92 ---------------------------~~~~~~----~~~~~~~~~~~----~~~~~~~~~g~~~~L~~l~~~~g~~l~i  136 (275)
T 2qlt_A           92 ---------------------------FADEEY----VNKLEGEIPEK----YGEHSIEVPGAVKLCNALNALPKEKWAV  136 (275)
T ss_dssp             ---------------------------GCCHHH----HHHHHHTHHHH----HCTTCEECTTHHHHHHHHHTSCGGGEEE
T ss_pred             ---------------------------CCcHHH----HHHHHHHHHHH----HhcCCCcCcCHHHHHHHHHhccCCeEEE
Confidence                                       011111    12222233222    2334679999999999   66 899999


Q ss_pred             EcCcH--HHHHHHHHHh
Q 029420          158 VTTKA--VSQMLYYESL  172 (193)
Q Consensus       158 vTnK~--~a~~lL~~~~  172 (193)
                      +||++  .++.+++.++
T Consensus       137 ~T~~~~~~~~~~l~~~~  153 (275)
T 2qlt_A          137 ATSGTRDMAKKWFDILK  153 (275)
T ss_dssp             ECSSCHHHHHHHHHHHT
T ss_pred             EeCCCHHHHHHHHHHcC
Confidence            99988  7777777763

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.13  E-value=1.9e-10  Score=91.04  Aligned_cols=34  Identities=15%  Similarity=0.213  Sum_probs=29.2

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ...+|||+.++|+   ++ ++++|+||++  .++.+++.+
T Consensus        98 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~  136 (234)
T 3u26_A           98 YGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDAL  136 (234)
T ss_dssp             HCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHT
T ss_pred             hCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHc
Confidence            4689999999999   56 9999999998  777787776

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.10  E-value=2.7e-10  Score=93.93  Aligned_cols=36  Identities=6%  Similarity=-0.065  Sum_probs=31.1

Q ss_pred             cCCCCCCCHHHHHH---hCCC--cEEEEcCcH--HHHHHHHHH
Q 029420          136 GANRFYPGIPDALK---FASS--RIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       136 ~~~~lypGV~e~L~---~~gi--~laVvTnK~--~a~~lL~~~  171 (193)
                      ....+|||+.++|+   ++|+  +++|+||.+  .++.+++.+
T Consensus       139 ~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~  181 (282)
T 3nuq_A          139 DILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLL  181 (282)
T ss_dssp             GTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHH
T ss_pred             hccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhC
Confidence            34689999999999   7899  999999998  777787766

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.10  E-value=1.6e-10  Score=90.72  Aligned_cols=34  Identities=15%  Similarity=0.083  Sum_probs=29.6

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ..++|||+.++|+   ++ ++++|+||++  .++.+++++
T Consensus        67 ~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~  105 (206)
T 1rku_A           67 TLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQL  105 (206)
T ss_dssp             TCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHT
T ss_pred             hcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHc
Confidence            4689999999999   56 9999999998  888888875

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.09  E-value=6e-11  Score=93.67  Aligned_cols=30  Identities=20%  Similarity=0.012  Sum_probs=28.6

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .|+|+||+||||+|+-+.+..+...+++++
T Consensus         6 ~k~i~fD~DGTL~d~~~~~~~~~~~~~~~~   35 (240)
T 3smv_A            6 FKALTFDCYGTLIDWETGIVNALQPLAKRT   35 (240)
T ss_dssp             CSEEEECCBTTTBCHHHHHHHHTHHHHHHH
T ss_pred             ceEEEEeCCCcCcCCchhHHHHHHHHHHHh
Confidence            589999999999999999999999999999

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.08  E-value=1.5e-10  Score=96.10  Aligned_cols=36  Identities=19%  Similarity=0.422  Sum_probs=30.5

Q ss_pred             cCCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          136 GANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       136 ~~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ....+|||+.++|+   ++|++++|+||++  .++.+|+++
T Consensus       127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~  167 (261)
T 1yns_A          127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS  167 (261)
T ss_dssp             CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTB
T ss_pred             cccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhh
Confidence            45689999999999   7899999999999  667777653

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.06  E-value=2e-11  Score=99.72  Aligned_cols=34  Identities=18%  Similarity=0.176  Sum_probs=30.5

Q ss_pred             CCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          139 RFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       139 ~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      .+|||+.++|+   ++|++++|+||++  .++.++++++
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~g  182 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELG  182 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHT
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcC
Confidence            78999999998   8899999999998  8888888763

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.06  E-value=1.4e-10  Score=90.93  Aligned_cols=37  Identities=19%  Similarity=0.212  Sum_probs=32.0

Q ss_pred             ccCCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          135 IGANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       135 ~~~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      .....+|||+.++|+   ++|++++|+||.+  .++.+++.+
T Consensus        66 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~  107 (205)
T 3m9l_A           66 AQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAI  107 (205)
T ss_dssp             EEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT
T ss_pred             hhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHc
Confidence            345689999999999   8899999999998  888888876

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=98.98  E-value=8.9e-10  Score=85.71  Aligned_cols=33  Identities=9%  Similarity=0.139  Sum_probs=28.9

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ..+|||+.++|+   ++| +++|+||++  .++.+++++
T Consensus        85 ~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~  122 (200)
T 3cnh_A           85 SQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTF  122 (200)
T ss_dssp             CCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHH
T ss_pred             CccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhC
Confidence            469999999999   788 999999998  778888776

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=98.98  E-value=9.6e-10  Score=87.29  Aligned_cols=35  Identities=11%  Similarity=0.223  Sum_probs=30.6

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ...+|||+.++|+   ++|++++|+||++  .++.+++++
T Consensus        93 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~  132 (232)
T 1zrn_A           93 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHA  132 (232)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT
T ss_pred             cCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhc
Confidence            3579999999998   8899999999998  777888765

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=98.97  E-value=1.7e-09  Score=87.41  Aligned_cols=32  Identities=9%  Similarity=0.130  Sum_probs=28.9

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYY  169 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~  169 (193)
                      .++|||+.++|+   ++|++++|+||++  .++.+++
T Consensus        76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~  112 (236)
T 2fea_A           76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE  112 (236)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT
T ss_pred             CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh
Confidence            589999999999   7899999999998  7777776

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=98.96  E-value=6.2e-10  Score=86.67  Aligned_cols=25  Identities=8%  Similarity=0.222  Sum_probs=23.1

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      ..+|||+.++|+   ++|++++|+||++
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~  117 (206)
T 2b0c_A           90 VALRPEVIAIMHKLREQGHRVVVLSNTN  117 (206)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEECCC
Confidence            478999999999   6999999999988

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=98.95  E-value=2.1e-09  Score=84.70  Aligned_cols=35  Identities=17%  Similarity=0.218  Sum_probs=30.8

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ...+|||+.++|+   ++|++++|+||.+  .++.+++.+
T Consensus        94 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~  133 (230)
T 3um9_A           94 SLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNS  133 (230)
T ss_dssp             SCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHC
Confidence            4689999999999   8899999999998  777888776

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=98.94  E-value=2.6e-09  Score=84.52  Aligned_cols=35  Identities=9%  Similarity=0.069  Sum_probs=30.5

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ...+|||+.++|+   ++|++++|+||.+  .++.+++.+
T Consensus        97 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~  136 (233)
T 3umb_A           97 CLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSA  136 (233)
T ss_dssp             SCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTT
T ss_pred             cCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHC
Confidence            3689999999999   8899999999998  777777765

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=98.91  E-value=3.9e-09  Score=84.45  Aligned_cols=34  Identities=21%  Similarity=0.212  Sum_probs=30.3

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ..+|||+.++|+   ++|++++|+||++  .++.+++++
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~  142 (240)
T 2no4_A          104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKAS  142 (240)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhc
Confidence            579999999998   8899999999998  778888876

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=98.89  E-value=3.7e-09  Score=85.68  Aligned_cols=34  Identities=21%  Similarity=0.196  Sum_probs=29.9

Q ss_pred             CCCCCCCHHHHHH--hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          137 ANRFYPGIPDALK--FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       137 ~~~lypGV~e~L~--~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ..++|||+.++|+  . |++++|+||++  .++.+++++
T Consensus        91 ~~~~~~~~~~~l~~l~-g~~~~i~t~~~~~~~~~~l~~~  128 (253)
T 1qq5_A           91 RLTPYPDAAQCLAELA-PLKRAILSNGAPDMLQALVANA  128 (253)
T ss_dssp             SCCBCTTHHHHHHHHT-TSEEEEEESSCHHHHHHHHHHT
T ss_pred             cCCCCccHHHHHHHHc-CCCEEEEeCcCHHHHHHHHHHC
Confidence            3589999999999  7 99999999998  778888776

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=98.83  E-value=9.7e-09  Score=89.96  Aligned_cols=24  Identities=13%  Similarity=0.004  Sum_probs=22.6

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCc
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTK  161 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK  161 (193)
                      .++|||+.++|+   ++|++++|+||.
T Consensus        99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~  125 (555)
T 3i28_A           99 RKINRPMLQAALMLRKKGFTTAILTNT  125 (555)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             cCcChhHHHHHHHHHHCCCEEEEEeCC
Confidence            589999999999   899999999997

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=98.83  E-value=1.6e-09  Score=84.05  Aligned_cols=34  Identities=9%  Similarity=-0.016  Sum_probs=28.8

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      .+++||+.++|+   ++|++++|+||++  .++.+++.+
T Consensus        75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~  113 (211)
T 1l7m_A           75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKL  113 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHc
Confidence            578999999999   8999999999998  666666654

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=98.82  E-value=2.4e-09  Score=83.14  Aligned_cols=35  Identities=17%  Similarity=0.072  Sum_probs=30.5

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      ..++||+.++|+   ++|++++|+||++  .++.+++++.
T Consensus        81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~  120 (219)
T 3kd3_A           81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLN  120 (219)
T ss_dssp             TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHT
T ss_pred             ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcC
Confidence            458999999999   8999999999988  8888887763

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=98.82  E-value=5.2e-09  Score=81.99  Aligned_cols=34  Identities=3%  Similarity=-0.032  Sum_probs=30.4

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      .+++||+.++|+   ++|++++|+||.+  .++.+++.+
T Consensus        74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~  112 (217)
T 3m1y_A           74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLL  112 (217)
T ss_dssp             CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHH
T ss_pred             CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHc
Confidence            679999999999   8899999999988  778888776

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=98.80  E-value=2.9e-08  Score=79.07  Aligned_cols=32  Identities=9%  Similarity=-0.027  Sum_probs=25.0

Q ss_pred             CCCCCCHHHHHH--hCCCcEEEEcCcH--HHHHHHH
Q 029420          138 NRFYPGIPDALK--FASSRIYIVTTKA--VSQMLYY  169 (193)
Q Consensus       138 ~~lypGV~e~L~--~~gi~laVvTnK~--~a~~lL~  169 (193)
                      ..++||+.++|+  .+.++++|+||.+  .++.+++
T Consensus       111 ~~~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~  146 (229)
T 4dcc_A          111 VDIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCK  146 (229)
T ss_dssp             CCCCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHH
T ss_pred             HhccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHh
Confidence            358899999999  3339999999998  6665553

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=98.77  E-value=2.9e-09  Score=83.15  Aligned_cols=32  Identities=13%  Similarity=0.137  Sum_probs=27.9

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      .++|||+.+ |+   ++ ++++|+||++  .++.+++++
T Consensus        73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~  109 (201)
T 2w43_A           73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERN  109 (201)
T ss_dssp             CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHT
T ss_pred             cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHC
Confidence            579999999 98   66 9999999998  778888876

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=98.26  E-value=7.3e-10  Score=92.23  Aligned_cols=38  Identities=18%  Similarity=0.082  Sum_probs=33.2

Q ss_pred             ccCCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          135 IGANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       135 ~~~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      ....++|||+.++|+   ++|++++|+||++  .++.++++++
T Consensus       132 ~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~g  174 (263)
T 2yj3_A          132 NISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELN  174 (263)
Confidence            445689999999999   7899999999999  8888888873

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=98.63  E-value=1.1e-07  Score=81.52  Aligned_cols=35  Identities=17%  Similarity=0.137  Sum_probs=31.8

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      .+++||+.++|+   ++|++++|+||.+  .++.+++.++
T Consensus       178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lg  217 (317)
T 4eze_A          178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQ  217 (317)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHT
T ss_pred             CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcC
Confidence            579999999999   8999999999999  8899988873

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=98.62  E-value=4.4e-08  Score=81.97  Aligned_cols=26  Identities=27%  Similarity=0.406  Sum_probs=24.2

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      ..+++||+.++|+   ++|++++|+||++
T Consensus        99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~  127 (258)
T 2i33_A           99 EAEALPGSIDFLKYTESKGVDIYYISNRK  127 (258)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             CCCcCccHHHHHHHHHHCCCEEEEEcCCc
Confidence            4689999999999   8999999999998

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=98.61  E-value=7.7e-08  Score=84.70  Aligned_cols=34  Identities=18%  Similarity=0.121  Sum_probs=31.0

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      .+++||+.++|+   ++|++++|+||.+  +++.+++.+
T Consensus       255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~l  293 (415)
T 3p96_A          255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEEL  293 (415)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT
T ss_pred             CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHc
Confidence            379999999999   8999999999988  888898886

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=98.57  E-value=2.2e-08  Score=80.83  Aligned_cols=33  Identities=9%  Similarity=0.042  Sum_probs=26.6

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYE  170 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~  170 (193)
                      ..++||+.++|+   ++|++++|+||++  .++.+++.
T Consensus        87 ~~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~  124 (211)
T 2b82_A           87 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT  124 (211)
T ss_dssp             CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH
Confidence            457899999998   7899999999998  55555554

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=98.54  E-value=5.7e-08  Score=77.50  Aligned_cols=33  Identities=21%  Similarity=0.166  Sum_probs=27.1

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYY  169 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~  169 (193)
                      ..++|||+.++|+   ++|++++|+||++  .+..+++
T Consensus        34 ~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~   71 (196)
T 2oda_A           34 HAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA   71 (196)
T ss_dssp             GGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT
T ss_pred             cCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC
Confidence            3579999999999   7899999999998  5544443

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=98.53  E-value=3.8e-08  Score=75.65  Aligned_cols=31  Identities=6%  Similarity=0.112  Sum_probs=26.3

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQML  167 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~l  167 (193)
                      ...++||+.++|+   ++|++++|+||++  .++.+
T Consensus        77 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~  112 (201)
T 4ap9_A           77 KVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF  112 (201)
T ss_dssp             GCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG
T ss_pred             hCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH
Confidence            4589999999999   8999999999988  55444

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=98.42  E-value=1.1e-07  Score=75.14  Aligned_cols=31  Identities=16%  Similarity=0.070  Sum_probs=25.0

Q ss_pred             CCceEEEecCcccccChHHHHHH--HHHHHHHh
Q 029420            1 MADLYALDFDGVLCDSCGESSLS--AVKAAKVR   31 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a--~~~al~~l   31 (193)
                      |.|+|+||+||||+||-+.+..+  +...+++.
T Consensus         2 ~~k~i~fDlDGTLl~~~~~~~~~~~~~~~l~~~   34 (250)
T 2c4n_A            2 TIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDK   34 (250)
T ss_dssp             CCCEEEEECBTTTEETTEECTTHHHHHHHHHHT
T ss_pred             CccEEEEcCcceEEeCCEeCcCHHHHHHHHHHc
Confidence            37999999999999998777666  55666666

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=98.27  E-value=1.1e-07  Score=74.26  Aligned_cols=35  Identities=20%  Similarity=0.214  Sum_probs=30.3

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH---HHHHHHHHH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA---VSQMLYYES  171 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~---~a~~lL~~~  171 (193)
                      ..+++||+.++|+   ++|++++|+||++   .++.+++.+
T Consensus        66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~  106 (187)
T 2wm8_A           66 DVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELF  106 (187)
T ss_dssp             EECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHT
T ss_pred             ccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHc
Confidence            4579999999999   7899999999984   778888876

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=98.26  E-value=2.2e-07  Score=77.11  Aligned_cols=23  Identities=9%  Similarity=-0.177  Sum_probs=19.9

Q ss_pred             CCCCCHHHHHH---hC-CCcEEEEcCc
Q 029420          139 RFYPGIPDALK---FA-SSRIYIVTTK  161 (193)
Q Consensus       139 ~lypGV~e~L~---~~-gi~laVvTnK  161 (193)
                      .++||+.++|+   +. |++++++|++
T Consensus       122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~  148 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHNILLNPQTQL  148 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSSCCCEEGGGT
T ss_pred             CCHHHHHHHHHHHHhhhCceeeecccc
Confidence            57899999998   54 9999999988

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=98.14  E-value=1.6e-06  Score=73.84  Aligned_cols=35  Identities=14%  Similarity=0.144  Sum_probs=31.2

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      .+++||+.++|+   ++|++++|+||.+  +++.++++++
T Consensus       177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lg  216 (335)
T 3n28_A          177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLS  216 (335)
T ss_dssp             CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHT
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcC
Confidence            579999999999   8999999999988  8888888763

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=98.09  E-value=2.1e-06  Score=69.89  Aligned_cols=26  Identities=15%  Similarity=-0.008  Sum_probs=22.5

Q ss_pred             cCCCCCCCHHHHHH--hCCCcEEEEcCcH
Q 029420          136 GANRFYPGIPDALK--FASSRIYIVTTKA  162 (193)
Q Consensus       136 ~~~~lypGV~e~L~--~~gi~laVvTnK~  162 (193)
                      ....+|||+.++|+  .+|+++ |+||++
T Consensus       123 ~~~~~~~~~~~~l~~l~~g~~~-i~tn~~  150 (264)
T 1yv9_A          123 DTELSYEKVVLATLAIQKGALF-IGTNPD  150 (264)
T ss_dssp             CTTCCHHHHHHHHHHHHTTCEE-EESCCC
T ss_pred             CCCcCHHHHHHHHHHHhCCCEE-EEECCC
Confidence            34678999999999  889987 999987

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=98.09  E-value=1.1e-06  Score=68.71  Aligned_cols=35  Identities=11%  Similarity=0.050  Sum_probs=29.2

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH-----HHHHHHHHH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA-----VSQMLYYES  171 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~-----~a~~lL~~~  171 (193)
                      ..++|||+.++|+   ++|++++|+||++     .++.+|+++
T Consensus        32 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~   74 (189)
T 3ib6_A           32 EVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNF   74 (189)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHT
T ss_pred             CceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhc
Confidence            4689999999999   8999999999976     556666665

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=98.06  E-value=5.4e-06  Score=69.74  Aligned_cols=26  Identities=12%  Similarity=0.282  Sum_probs=24.3

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      ..++|||+.++|+   ++|++++|+|||+
T Consensus        99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~  127 (260)
T 3pct_A           99 QSAAIPGAVEFSNYVNANGGTMFFVSNRR  127 (260)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCC
Confidence            5789999999999   8999999999997

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=98.02  E-value=5.4e-06  Score=69.85  Aligned_cols=26  Identities=19%  Similarity=0.365  Sum_probs=24.3

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      ..++||||.++|+   ++|++++|+|||+
T Consensus        99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~  127 (262)
T 3ocu_A           99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRK  127 (262)
T ss_dssp             CCEECTTHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCC
Confidence            5789999999999   8999999999996

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=97.97  E-value=6e-06  Score=73.18  Aligned_cols=24  Identities=29%  Similarity=0.555  Sum_probs=22.1

Q ss_pred             CCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          139 RFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       139 ~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      .+|||+.++|+   ++|++++|+||++
T Consensus        87 ~~~pgv~e~L~~L~~~G~~l~IvTN~~  113 (416)
T 3zvl_A           87 ILYPEIPKKLQELAAEGYKLVIFTNQM  113 (416)
T ss_dssp             ESCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred             hhcccHHHHHHHHHHCCCeEEEEeCCc
Confidence            48999999999   8999999999965

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=97.89  E-value=3.2e-06  Score=68.74  Aligned_cols=31  Identities=32%  Similarity=0.328  Sum_probs=28.5

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      |.|+|+|||||||+||-+.+..+.+.+++++
T Consensus         4 M~kli~fDlDGTLl~~~~~i~~~~~~al~~l   34 (274)
T 3fzq_A            4 LYKLLILDIDGTLRDEVYGIPESAKHAIRLC   34 (274)
T ss_dssp             CCCEEEECSBTTTBBTTTBCCHHHHHHHHHH
T ss_pred             cceEEEEECCCCCCCCCCcCCHHHHHHHHHH
Confidence            6799999999999999999999988888887

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=97.76  E-value=2.1e-05  Score=66.92  Aligned_cols=31  Identities=13%  Similarity=0.070  Sum_probs=25.6

Q ss_pred             CCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHH
Q 029420          139 RFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYE  170 (193)
Q Consensus       139 ~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~  170 (193)
                      .++|++.++|+   + |++++|+|++.  .+..+.+.
T Consensus       103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~  138 (332)
T 1y8a_A          103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASM  138 (332)
T ss_dssp             CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchh
Confidence            67999999999   6 99999999987  66665554

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=97.73  E-value=9.8e-06  Score=66.35  Aligned_cols=30  Identities=27%  Similarity=0.418  Sum_probs=17.3

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .|+|+|||||||+||-+.+..+...+++++
T Consensus         5 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l   34 (279)
T 3mpo_A            5 IKLIAIDIDGTLLNEKNELAQATIDAVQAA   34 (279)
T ss_dssp             CCEEEECC-----------CHHHHHHHHHH
T ss_pred             eEEEEEcCcCCCCCCCCcCCHHHHHHHHHH
Confidence            699999999999999999999999998887

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=97.68  E-value=1.2e-05  Score=64.76  Aligned_cols=31  Identities=16%  Similarity=0.161  Sum_probs=27.1

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      |.|+|+|||||||+||-..+......+++++
T Consensus         2 m~kli~~DlDGTLl~~~~~i~~~~~~al~~l   32 (231)
T 1wr8_A            2 KIKAISIDIDGTITYPNRMIHEKALEAIRRA   32 (231)
T ss_dssp             CCCEEEEESTTTTBCTTSCBCHHHHHHHHHH
T ss_pred             ceeEEEEECCCCCCCCCCcCCHHHHHHHHHH
Confidence            6899999999999999888877777777777

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=97.66  E-value=1.2e-05  Score=65.53  Aligned_cols=31  Identities=32%  Similarity=0.371  Sum_probs=26.7

Q ss_pred             CCceEEEecCccccc-ChHHHHHHHHHHHHHh
Q 029420            1 MADLYALDFDGVLCD-SCGESSLSAVKAAKVR   31 (193)
Q Consensus         1 ~~~~vlFDlDGTLvD-S~~di~~a~~~al~~l   31 (193)
                      |.|+|+|||||||+| +-..+..+.+.+++++
T Consensus        11 miKli~~DlDGTLl~~~~~~i~~~~~~al~~l   42 (268)
T 3r4c_A           11 MIKVLLLDVDGTLLSFETHKVSQSSIDALKKV   42 (268)
T ss_dssp             CCCEEEECSBTTTBCTTTCSCCHHHHHHHHHH
T ss_pred             ceEEEEEeCCCCCcCCCCCcCCHHHHHHHHHH
Confidence            679999999999999 6777888888887776

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=97.66  E-value=1.3e-05  Score=67.09  Aligned_cols=31  Identities=23%  Similarity=0.237  Sum_probs=26.7

Q ss_pred             CCceEEEecCcccccChHHHHHH-HHHHHHHh
Q 029420            1 MADLYALDFDGVLCDSCGESSLS-AVKAAKVR   31 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a-~~~al~~l   31 (193)
                      |.|+|+|||||||+||-..+... .+.+++++
T Consensus        36 ~iKli~fDlDGTLld~~~~i~~~~~~~al~~l   67 (304)
T 3l7y_A           36 SVKVIATDMDGTFLNSKGSYDHNRFQRILKQL   67 (304)
T ss_dssp             CCSEEEECCCCCCSCTTSCCCHHHHHHHHHHH
T ss_pred             eeEEEEEeCCCCCCCCCCccCHHHHHHHHHHH
Confidence            47999999999999998888777 67777777

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=97.65  E-value=1.3e-05  Score=65.69  Aligned_cols=30  Identities=30%  Similarity=0.237  Sum_probs=27.8

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .|+|+|||||||+||-..+..+...+++++
T Consensus         5 ~kli~fDlDGTLl~~~~~i~~~~~~al~~l   34 (279)
T 4dw8_A            5 YKLIVLDLDGTLTNSKKEISSRNRETLIRI   34 (279)
T ss_dssp             CCEEEECCCCCCSCTTSCCCHHHHHHHHHH
T ss_pred             ceEEEEeCCCCCCCCCCccCHHHHHHHHHH
Confidence            699999999999999999998888888887

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=97.63  E-value=1.4e-05  Score=65.78  Aligned_cols=30  Identities=30%  Similarity=0.362  Sum_probs=27.8

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .|+|+|||||||+||-+.+..+...+++++
T Consensus         6 ~kli~fDlDGTLl~~~~~i~~~~~~al~~l   35 (290)
T 3dnp_A            6 KQLLALNIDGALLRSNGKIHQATKDAIEYV   35 (290)
T ss_dssp             CCEEEECCCCCCSCTTSCCCHHHHHHHHHH
T ss_pred             ceEEEEcCCCCCCCCCCccCHHHHHHHHHH
Confidence            589999999999999999999998888887

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=97.61  E-value=4.5e-05  Score=60.68  Aligned_cols=25  Identities=24%  Similarity=0.393  Sum_probs=23.2

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      .++|||+.++|+   ++|++++|+||++
T Consensus        49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~   76 (211)
T 2gmw_A           49 FEFIDGVIDAMRELKKMGFALVVVTNQS   76 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECT
T ss_pred             CcCCcCHHHHHHHHHHCCCeEEEEECcC
Confidence            578999999999   8899999999997

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=97.60  E-value=1.7e-05  Score=65.63  Aligned_cols=31  Identities=26%  Similarity=0.176  Sum_probs=28.1

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      |.|+|+|||||||+||-..+..+...+++++
T Consensus        20 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l   50 (285)
T 3pgv_A           20 MYQVVASDLDGTLLSPDHFLTPYAKETLKLL   50 (285)
T ss_dssp             -CCEEEEECCCCCSCTTSCCCHHHHHHHHHH
T ss_pred             cceEEEEeCcCCCCCCCCcCCHHHHHHHHHH
Confidence            4689999999999999999999999999888

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=97.51  E-value=0.00017  Score=63.52  Aligned_cols=64  Identities=11%  Similarity=0.135  Sum_probs=46.2

Q ss_pred             cCCCHHHHHHHHHHHHHHHHHhh-----hhc-------------cccCCCCCCCHHHHHH---hCCCcEEEEcCcH--HH
Q 029420          108 WSENRDALVDLFGKVRDEWMDKD-----LTT-------------WIGANRFYPGIPDALK---FASSRIYIVTTKA--VS  164 (193)
Q Consensus       108 ~g~~~e~~~~~~~~~r~~y~~~y-----~~~-------------~~~~~~lypGV~e~L~---~~gi~laVvTnK~--~a  164 (193)
                      .|++.+++++....+.+.....-     ...             .....++|||+.++++   ++|++++|||.-+  ++
T Consensus       172 ~GmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~v~~~~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v  251 (385)
T 4gxt_A          172 KNYKTEEVYDLCKGAYASMKKERIRVEEFVSPDIKSEAGRISIKYFVGIRTLDEMVDLYRSLEENGIDCYIVSASFIDIV  251 (385)
T ss_dssp             TTCCHHHHHHHHHHHHHHHTTSCCEEEEEECCSSCCSSCCCEEEEEECCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHH
T ss_pred             cCCCHHHHHHHHHHHHHhccccccCceeeecccccccCceeEEeeccCceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHH
Confidence            48999988888877766543210     000             0111247999999999   9999999999988  88


Q ss_pred             HHHHHHH
Q 029420          165 QMLYYES  171 (193)
Q Consensus       165 ~~lL~~~  171 (193)
                      +++.+.+
T Consensus       252 ~~ia~~l  258 (385)
T 4gxt_A          252 RAFATDT  258 (385)
T ss_dssp             HHHHHCT
T ss_pred             HHHHHHh
Confidence            8887765

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=97.49  E-value=2.7e-05  Score=64.47  Aligned_cols=31  Identities=23%  Similarity=0.192  Sum_probs=27.5

Q ss_pred             CCceEEEecCcccccChH-HHHHHHHHHHHHh
Q 029420            1 MADLYALDFDGVLCDSCG-ESSLSAVKAAKVR   31 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~-di~~a~~~al~~l   31 (193)
                      |.|+|+|||||||+||-. .+..+...+++++
T Consensus        20 ~~kli~~DlDGTLl~~~~~~i~~~~~~al~~l   51 (283)
T 3dao_A           20 MIKLIATDIDGTLVKDGSLLIDPEYMSVIDRL   51 (283)
T ss_dssp             CCCEEEECCBTTTBSTTCSCCCHHHHHHHHHH
T ss_pred             CceEEEEeCcCCCCCCCCCcCCHHHHHHHHHH
Confidence            568999999999999988 8888888888887

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=97.43  E-value=3.4e-05  Score=62.58  Aligned_cols=30  Identities=27%  Similarity=0.382  Sum_probs=25.4

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .|+|+||+||||+||-+.+..+...+++++
T Consensus         3 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l   32 (258)
T 2pq0_A            3 RKIVFFDIDGTLLDEQKQLPLSTIEAVRRL   32 (258)
T ss_dssp             CCEEEECTBTTTBCTTSCCCHHHHHHHHHH
T ss_pred             ceEEEEeCCCCCcCCCCccCHHHHHHHHHH
Confidence            589999999999999887777777777666

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=97.42  E-value=0.00011  Score=63.38  Aligned_cols=62  Identities=10%  Similarity=0.102  Sum_probs=41.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHh-----hhh----ccccCCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHH
Q 029420          109 SENRDALVDLFGKVRDEWMDK-----DLT----TWIGANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYE  170 (193)
Q Consensus       109 g~~~e~~~~~~~~~r~~y~~~-----y~~----~~~~~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~  170 (193)
                      |++.+++++...++.+.-...     |..    +....-++||++.++++   ++|+++.|||.-+  +++++.+.
T Consensus       104 GmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~  179 (327)
T 4as2_A          104 GFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAAD  179 (327)
T ss_dssp             TSBHHHHHHHHHHHHHHCSCEEEEEEETTEEEEEEECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTC
T ss_pred             CCCHHHHHHHHHHHHHhccccccccccccccccccccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhh
Confidence            788888877766665532100     000    00112368999999999   9999999999998  77766654

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=97.32  E-value=6.4e-05  Score=62.28  Aligned_cols=31  Identities=32%  Similarity=0.386  Sum_probs=23.4

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      |.|+|+||+||||+|+-..+......+++++
T Consensus         3 mikli~~DlDGTLl~~~~~i~~~~~~al~~l   33 (288)
T 1nrw_A            3 AMKLIAIDLDGTLLNSKHQVSLENENALRQA   33 (288)
T ss_dssp             -CCEEEEECCCCCSCTTSCCCHHHHHHHHHH
T ss_pred             ceEEEEEeCCCCCCCCCCccCHHHHHHHHHH
Confidence            7899999999999999766666655555544

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=97.22  E-value=9.5e-05  Score=60.71  Aligned_cols=30  Identities=23%  Similarity=0.312  Sum_probs=23.9

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHH
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKV   30 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~   30 (193)
                      |.|+|+|||||||+|+-..+......++++
T Consensus         1 mikli~~DlDGTLl~~~~~i~~~~~~al~~   30 (268)
T 1nf2_A            1 MYRVFVFDLDGTLLNDNLEISEKDRRNIEK   30 (268)
T ss_dssp             CBCEEEEECCCCCSCTTSCCCHHHHHHHHH
T ss_pred             CccEEEEeCCCcCCCCCCccCHHHHHHHHH
Confidence            889999999999999976665555556555

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=97.15  E-value=0.00026  Score=57.41  Aligned_cols=29  Identities=21%  Similarity=0.304  Sum_probs=23.0

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .|+|+||+||||+|+ ..+...+..+++++
T Consensus         6 ~kli~~DlDGTLl~~-~~~~~~~~~ai~~l   34 (266)
T 3pdw_A            6 YKGYLIDLDGTMYNG-TEKIEEACEFVRTL   34 (266)
T ss_dssp             CSEEEEECSSSTTCH-HHHHHHHHHHHHHH
T ss_pred             CCEEEEeCcCceEeC-CEeCccHHHHHHHH
Confidence            699999999999998 55555566666666

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=97.12  E-value=0.00015  Score=57.84  Aligned_cols=29  Identities=34%  Similarity=0.267  Sum_probs=20.8

Q ss_pred             CceEEEecCcccccCh-------HHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSC-------GESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~-------~di~~a~~~al~~l   31 (193)
                      .|+|+||+||||+||-       +....+ ...+++.
T Consensus        12 ~k~i~fDlDGTLl~s~~~~~~~~~~~~~a-~~~l~~~   47 (271)
T 2x4d_A           12 VRGVLLDISGVLYDSGAGGGTAIAGSVEA-VARLKRS   47 (271)
T ss_dssp             CCEEEECCBTTTEECCTTTCEECTTHHHH-HHHHHHS
T ss_pred             CCEEEEeCCCeEEecCCCCCccCcCHHHH-HHHHHHC
Confidence            6899999999999963       444433 3456666

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=97.09  E-value=0.00014  Score=59.10  Aligned_cols=29  Identities=21%  Similarity=0.226  Sum_probs=21.6

Q ss_pred             ceEEEecCcccccChHH-HHHHHHHHHHHh
Q 029420            3 DLYALDFDGVLCDSCGE-SSLSAVKAAKVR   31 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~d-i~~a~~~al~~l   31 (193)
                      |+|+||+||||+|+-.. +......+++++
T Consensus         3 kli~~DlDGTLl~~~~~~i~~~~~~al~~l   32 (261)
T 2rbk_A            3 KALFFDIDGTLVSFETHRIPSSTIEALEAA   32 (261)
T ss_dssp             CEEEECSBTTTBCTTTSSCCHHHHHHHHHH
T ss_pred             cEEEEeCCCCCcCCCCCcCCHHHHHHHHHH
Confidence            89999999999998765 555554555444

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=97.04  E-value=0.00018  Score=58.97  Aligned_cols=31  Identities=10%  Similarity=0.127  Sum_probs=23.5

Q ss_pred             CCceEEEecCcccccChHHHHHH-HHHHHHHh
Q 029420            1 MADLYALDFDGVLCDSCGESSLS-AVKAAKVR   31 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a-~~~al~~l   31 (193)
                      |.|+|+|||||||+|+-..+... +..+++++
T Consensus         2 ~~kli~~DlDGTLl~~~~~i~~~~~~~al~~l   33 (271)
T 1rlm_A            2 AVKVIVTDMDGTFLNDAKTYNQPRFMAQYQEL   33 (271)
T ss_dssp             CCCEEEECCCCCCSCTTSCCCHHHHHHHHHHH
T ss_pred             CccEEEEeCCCCCCCCCCcCCHHHHHHHHHHH
Confidence            37999999999999987666655 35555555

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=97.03  E-value=0.0002  Score=57.63  Aligned_cols=16  Identities=38%  Similarity=0.555  Sum_probs=14.7

Q ss_pred             CceEEEecCcccccCh
Q 029420            2 ADLYALDFDGVLCDSC   17 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~   17 (193)
                      .++|+||+||||+||.
T Consensus        49 ik~viFDlDGTL~Ds~   64 (211)
T 3ij5_A           49 IRLLICDVDGVMSDGL   64 (211)
T ss_dssp             CSEEEECCTTTTSSSE
T ss_pred             CCEEEEeCCCCEECCH
Confidence            4899999999999995

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=97.03  E-value=0.00019  Score=59.36  Aligned_cols=31  Identities=26%  Similarity=0.200  Sum_probs=21.7

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      |.|+|+||+||||+|+-..+......+++++
T Consensus         4 m~kli~~DlDGTLl~~~~~i~~~~~~aL~~l   34 (282)
T 1rkq_A            4 AIKLIAIDMDGTLLLPDHTISPAVKNAIAAA   34 (282)
T ss_dssp             CCCEEEECCCCCCSCTTSCCCHHHHHHHHHH
T ss_pred             cceEEEEeCCCCCCCCCCcCCHHHHHHHHHH
Confidence            5699999999999998654444444444444

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=97.01  E-value=0.00022  Score=55.89  Aligned_cols=16  Identities=44%  Similarity=0.615  Sum_probs=14.5

Q ss_pred             CceEEEecCcccccCh
Q 029420            2 ADLYALDFDGVLCDSC   17 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~   17 (193)
                      .++|+||+||||+||.
T Consensus        19 ik~vifD~DGTL~d~~   34 (189)
T 3mn1_A           19 IKLAVFDVDGVLTDGR   34 (189)
T ss_dssp             CCEEEECSTTTTSCSE
T ss_pred             CCEEEEcCCCCcCCcc
Confidence            5899999999999984

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=97.01  E-value=0.0001  Score=60.00  Aligned_cols=27  Identities=26%  Similarity=0.180  Sum_probs=23.7

Q ss_pred             eEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            4 LYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         4 ~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      +|+|||||||+||- .+..+++.+++++
T Consensus         2 li~~DlDGTLl~~~-~i~~~~~~al~~l   28 (259)
T 3zx4_A            2 IVFTDLDGTLLDER-GELGPAREALERL   28 (259)
T ss_dssp             EEEECCCCCCSCSS-SSCSTTHHHHHHH
T ss_pred             EEEEeCCCCCcCCC-cCCHHHHHHHHHH
Confidence            69999999999998 8888877787777

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=96.93  E-value=0.00025  Score=56.63  Aligned_cols=23  Identities=22%  Similarity=0.345  Sum_probs=20.1

Q ss_pred             CCCCCHHHHHH--hCCCcEEEEcCcH
Q 029420          139 RFYPGIPDALK--FASSRIYIVTTKA  162 (193)
Q Consensus       139 ~lypGV~e~L~--~~gi~laVvTnK~  162 (193)
                      .+|||+.++|+  .+|+++ |+||++
T Consensus       122 ~~~~~~~~~l~~l~~~~~~-i~t~~~  146 (259)
T 2ho4_A          122 FHYQLLNQAFRLLLDGAPL-IAIHKA  146 (259)
T ss_dssp             CBHHHHHHHHHHHHTTCCE-EESCCC
T ss_pred             CCHHHHHHHHHHHHCCCEE-EEECCC
Confidence            37899999998  689999 999986

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=96.86  E-value=0.00028  Score=57.83  Aligned_cols=30  Identities=20%  Similarity=0.051  Sum_probs=24.5

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .|+|+||+||||+|+-..+......+++++
T Consensus         4 ~kli~~DlDGTLl~~~~~i~~~~~~~l~~l   33 (246)
T 3f9r_A            4 RVLLLFDVDGTLTPPRLCQTDEMRALIKRA   33 (246)
T ss_dssp             SEEEEECSBTTTBSTTSCCCHHHHHHHHHH
T ss_pred             ceEEEEeCcCCcCCCCCccCHHHHHHHHHH
Confidence            799999999999999776666666666666

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=96.84  E-value=0.00023  Score=62.63  Aligned_cols=38  Identities=16%  Similarity=0.099  Sum_probs=33.6

Q ss_pred             CCCCCCCHHHHHH--hCCCcEEEEcCcH--HHHHHHHHHhHH
Q 029420          137 ANRFYPGIPDALK--FASSRIYIVTTKA--VSQMLYYESLQE  174 (193)
Q Consensus       137 ~~~lypGV~e~L~--~~gi~laVvTnK~--~a~~lL~~~~~~  174 (193)
                      ..++-||+.++|+  ..++.++|.|+..  .|.++++.+.+.
T Consensus        73 ~v~~RPg~~eFL~~l~~~yeivI~Tas~~~yA~~vl~~LDp~  114 (372)
T 3ef0_A           73 YIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPT  114 (372)
T ss_dssp             EEEECTTHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHCTT
T ss_pred             EEEECcCHHHHHHHHhcCcEEEEEeCCcHHHHHHHHHHhccC
Confidence            3577899999999  8999999999988  999999988654

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=96.81  E-value=0.00043  Score=52.21  Aligned_cols=17  Identities=35%  Similarity=0.409  Sum_probs=14.8

Q ss_pred             CCceEEEecCcccccCh
Q 029420            1 MADLYALDFDGVLCDSC   17 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~   17 (193)
                      |.|+|+||+||||+|+-
T Consensus         3 ~ik~vifD~DGTL~~~~   19 (164)
T 3e8m_A            3 EIKLILTDIDGVWTDGG   19 (164)
T ss_dssp             CCCEEEECSTTTTSSSE
T ss_pred             cceEEEEcCCCceEcCc
Confidence            45899999999999964

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=96.76  E-value=0.00041  Score=56.42  Aligned_cols=29  Identities=14%  Similarity=0.171  Sum_probs=21.5

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .|+|+||+||||+|+-..+ ..+..+++++
T Consensus         5 ~kli~~DlDGTLl~~~~~i-~~~~eal~~l   33 (264)
T 3epr_A            5 YKGYLIDLDGTIYKGKSRI-PAGERFIERL   33 (264)
T ss_dssp             CCEEEECCBTTTEETTEEC-HHHHHHHHHH
T ss_pred             CCEEEEeCCCceEeCCEEC-cCHHHHHHHH
Confidence            6999999999999988655 3444444444

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=96.73  E-value=0.00048  Score=57.85  Aligned_cols=30  Identities=27%  Similarity=0.261  Sum_probs=20.2

Q ss_pred             CCceEEEecCcccccC-hHHHHHHHHHHHHH
Q 029420            1 MADLYALDFDGVLCDS-CGESSLSAVKAAKV   30 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS-~~di~~a~~~al~~   30 (193)
                      |.|+|+||+||||+|+ -..+......++++
T Consensus        26 ~ikli~~DlDGTLl~~~~~~is~~~~~al~~   56 (301)
T 2b30_A           26 DIKLLLIDFDGTLFVDKDIKVPSENIDAIKE   56 (301)
T ss_dssp             CCCEEEEETBTTTBCCTTTCSCHHHHHHHHH
T ss_pred             cccEEEEECCCCCcCCCCCccCHHHHHHHHH
Confidence            3699999999999998 44333333334433

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=96.73  E-value=0.00044  Score=53.51  Aligned_cols=16  Identities=44%  Similarity=0.617  Sum_probs=13.9

Q ss_pred             CceEEEecCcccccCh
Q 029420            2 ADLYALDFDGVLCDSC   17 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~   17 (193)
                      .++|+||+||||+|+.
T Consensus        12 ~k~vifD~DGTL~d~~   27 (176)
T 3mmz_A           12 IDAVVLDFDGTQTDDR   27 (176)
T ss_dssp             CSEEEECCTTTTSCSC
T ss_pred             CCEEEEeCCCCcCcCC
Confidence            4799999999999943

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=96.73  E-value=0.00043  Score=51.17  Aligned_cols=16  Identities=25%  Similarity=0.418  Sum_probs=14.2

Q ss_pred             ceEEEecCcccccChH
Q 029420            3 DLYALDFDGVLCDSCG   18 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~   18 (193)
                      |+|+||+||||+|+-.
T Consensus         2 k~i~~DlDGTL~~~~~   17 (126)
T 1xpj_A            2 KKLIVDLDGTLTQANT   17 (126)
T ss_dssp             CEEEECSTTTTBCCCC
T ss_pred             CEEEEecCCCCCCCCC
Confidence            7899999999998753

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=96.71  E-value=0.0036  Score=52.03  Aligned_cols=35  Identities=9%  Similarity=0.071  Sum_probs=31.3

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      .++-||+.++++   ++|+++.|+|.-.  +++++++.++
T Consensus       140 i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g  179 (297)
T 4fe3_A          140 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAG  179 (297)
T ss_dssp             CCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTT
T ss_pred             CCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcC
Confidence            578899999999   8999999999877  9999988875

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=96.54  E-value=0.00078  Score=52.01  Aligned_cols=17  Identities=35%  Similarity=0.433  Sum_probs=15.0

Q ss_pred             CCceEEEecCcccccCh
Q 029420            1 MADLYALDFDGVLCDSC   17 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~   17 (193)
                      |.|+|+||+||||+|+-
T Consensus         7 ~ik~i~~DlDGTL~~~~   23 (180)
T 1k1e_A            7 NIKFVITDVDGVLTDGQ   23 (180)
T ss_dssp             GCCEEEEECTTTTSCSE
T ss_pred             CCeEEEEeCCCCcCCCC
Confidence            46899999999999983

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=96.41  E-value=0.00055  Score=55.16  Aligned_cols=31  Identities=32%  Similarity=0.350  Sum_probs=21.8

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      |.|+|+||+||||+++-..+...+..+++++
T Consensus         4 m~kli~~DlDGTLl~~~~~i~~~~~~~l~~l   34 (227)
T 1l6r_A            4 MIRLAAIDVDGNLTDRDRLISTKAIESIRSA   34 (227)
T ss_dssp             CCCEEEEEHHHHSBCTTSCBCHHHHHHHHHH
T ss_pred             ceEEEEEECCCCCcCCCCcCCHHHHHHHHHH
Confidence            6799999999999997544444444444444

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=96.37  E-value=0.00094  Score=50.17  Aligned_cols=17  Identities=41%  Similarity=0.591  Sum_probs=14.8

Q ss_pred             CCceEEEecCcccccCh
Q 029420            1 MADLYALDFDGVLCDSC   17 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~   17 (193)
                      |.|+|+||+||||+|+-
T Consensus         8 ~~k~v~~DlDGTL~~~~   24 (162)
T 2p9j_A            8 KLKLLIMDIDGVLTDGK   24 (162)
T ss_dssp             HCCEEEECCTTTTSCSE
T ss_pred             ceeEEEEecCcceECCc
Confidence            46899999999999864

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=96.34  E-value=0.00099  Score=54.49  Aligned_cols=30  Identities=17%  Similarity=0.106  Sum_probs=24.4

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .|+|+||+||||+++-..+......+++++
T Consensus        13 ~kli~~DlDGTLl~~~~~is~~~~~al~~l   42 (262)
T 2fue_A           13 RVLCLFDVDGTLTPARQKIDPEVAAFLQKL   42 (262)
T ss_dssp             CEEEEEESBTTTBSTTSCCCHHHHHHHHHH
T ss_pred             eEEEEEeCccCCCCCCCcCCHHHHHHHHHH
Confidence            489999999999998766666666777776

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=96.33  E-value=0.001  Score=53.65  Aligned_cols=29  Identities=17%  Similarity=0.123  Sum_probs=24.1

Q ss_pred             ceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            3 DLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      |+|+||+||||+++-..+......+++++
T Consensus         7 kli~~DlDGTLl~~~~~i~~~~~~al~~l   35 (246)
T 2amy_A            7 ALCLFDVDGTLTAPRQKITKEMDDFLQKL   35 (246)
T ss_dssp             EEEEEESBTTTBCTTSCCCHHHHHHHHHH
T ss_pred             eEEEEECCCCcCCCCcccCHHHHHHHHHH
Confidence            79999999999998766666676777777

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=96.29  E-value=0.00061  Score=55.15  Aligned_cols=25  Identities=16%  Similarity=0.028  Sum_probs=21.0

Q ss_pred             CCCCCCCHHHHHH--hCCCcEEEEcCcH
Q 029420          137 ANRFYPGIPDALK--FASSRIYIVTTKA  162 (193)
Q Consensus       137 ~~~lypGV~e~L~--~~gi~laVvTnK~  162 (193)
                      ...+|||+.+.|+  ..|+++ |+||++
T Consensus       135 ~~~~~~~~~~~l~~l~~~~~~-i~tn~~  161 (271)
T 1vjr_A          135 KTLTYERLKKACILLRKGKFY-IATHPD  161 (271)
T ss_dssp             TTCCHHHHHHHHHHHTTTCEE-EESCCC
T ss_pred             CCcCHHHHHHHHHHHHCCCeE-EEECCC
Confidence            3468899999988  788988 999986

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=96.24  E-value=0.0029  Score=48.82  Aligned_cols=26  Identities=23%  Similarity=0.363  Sum_probs=23.7

Q ss_pred             cCCCCCCCHHHHHH---hCCCcEEEEcCc
Q 029420          136 GANRFYPGIPDALK---FASSRIYIVTTK  161 (193)
Q Consensus       136 ~~~~lypGV~e~L~---~~gi~laVvTnK  161 (193)
                      ...++|||+.++|+   ++|++++|+||+
T Consensus        39 ~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~   67 (176)
T 2fpr_A           39 DKLAFEPGVIPQLLKLQKAGYKLVMITNQ   67 (176)
T ss_dssp             GGCCBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred             HHCcCCccHHHHHHHHHHCCCEEEEEECC
Confidence            35689999999999   889999999998

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=96.18  E-value=0.0025  Score=48.65  Aligned_cols=16  Identities=38%  Similarity=0.578  Sum_probs=14.0

Q ss_pred             CceEEEecCcccccCh
Q 029420            2 ADLYALDFDGVLCDSC   17 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~   17 (193)
                      .++|+||+||||+++-
T Consensus         3 ~k~i~~DlDGTL~~~~   18 (142)
T 2obb_A            3 AMTIAVDFDGTIVEHR   18 (142)
T ss_dssp             CCEEEECCBTTTBCSC
T ss_pred             CeEEEEECcCCCCCCC
Confidence            4799999999999963

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=96.16  E-value=0.001  Score=54.00  Aligned_cols=29  Identities=28%  Similarity=0.178  Sum_probs=19.2

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      |.|+|+||+||||+ +-..+. ....+++++
T Consensus         1 Mikli~~DlDGTLl-~~~~~~-~~~~~l~~l   29 (249)
T 2zos_A            1 MIRLIFLDIDKTLI-PGYEPD-PAKPIIEEL   29 (249)
T ss_dssp             CEEEEEECCSTTTC-TTSCSG-GGHHHHHHH
T ss_pred             CccEEEEeCCCCcc-CCCCcH-HHHHHHHHH
Confidence            78999999999999 543332 233444444

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=96.15  E-value=0.0032  Score=50.79  Aligned_cols=17  Identities=35%  Similarity=0.556  Sum_probs=15.3

Q ss_pred             CceEEEecCcccccChH
Q 029420            2 ADLYALDFDGVLCDSCG   18 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~   18 (193)
                      .|+|+||+||||+|+-.
T Consensus         8 ~kli~~DlDGTLl~~~~   24 (268)
T 3qgm_A            8 KKGYIIDIDGVIGKSVT   24 (268)
T ss_dssp             CSEEEEECBTTTEETTE
T ss_pred             CCEEEEcCcCcEECCCE
Confidence            69999999999999864

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=95.94  E-value=0.0048  Score=49.87  Aligned_cols=30  Identities=13%  Similarity=-0.062  Sum_probs=20.9

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      |..+|+||+||||+++-..+ .....+++++
T Consensus         2 ~~~li~~DlDGTLl~~~~~~-~~~~~~l~~~   31 (244)
T 1s2o_A            2 RQLLLISDLDNTWVGDQQAL-EHLQEYLGDR   31 (244)
T ss_dssp             CSEEEEECTBTTTBSCHHHH-HHHHHHHHTT
T ss_pred             CCeEEEEeCCCCCcCCHHHH-HHHHHHHHHh
Confidence            33599999999999986544 4444555544

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=95.66  E-value=0.004  Score=49.26  Aligned_cols=16  Identities=38%  Similarity=0.555  Sum_probs=14.1

Q ss_pred             CceEEEecCcccccCh
Q 029420            2 ADLYALDFDGVLCDSC   17 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~   17 (193)
                      .++|+||+||||+|+.
T Consensus        25 ik~vifD~DGtL~d~~   40 (195)
T 3n07_A           25 IKLLICDVDGVFSDGL   40 (195)
T ss_dssp             CCEEEECSTTTTSCSC
T ss_pred             CCEEEEcCCCCcCCCc
Confidence            4799999999999963

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=95.64  E-value=0.0043  Score=48.15  Aligned_cols=16  Identities=50%  Similarity=0.679  Sum_probs=14.0

Q ss_pred             CCceEEEecCcccccC
Q 029420            1 MADLYALDFDGVLCDS   16 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS   16 (193)
                      +.|+|+||+||||+|+
T Consensus        25 ~ik~vifD~DGTL~~~   40 (188)
T 2r8e_A           25 NIRLLILDVDGVLSDG   40 (188)
T ss_dssp             TCSEEEECCCCCCBCS
T ss_pred             cCCEEEEeCCCCcCCC
Confidence            3589999999999995

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=95.59  E-value=0.0033  Score=52.04  Aligned_cols=33  Identities=15%  Similarity=0.250  Sum_probs=27.7

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--H---HHHHHHH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--V---SQMLYYE  170 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~---a~~lL~~  170 (193)
                      +++||||.++|+   ++|++++|+|||+  .   +...|++
T Consensus       187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~  227 (301)
T 1ltq_A          187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRM  227 (301)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHH
T ss_pred             cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHh
Confidence            457999999999   8999999999999  3   3566666

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=95.34  E-value=0.016  Score=41.33  Aligned_cols=19  Identities=21%  Similarity=0.289  Sum_probs=15.6

Q ss_pred             CceEEEecCcccccChHHH
Q 029420            2 ADLYALDFDGVLCDSCGES   20 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di   20 (193)
                      .|+|+||+||||.++..-+
T Consensus         2 ~k~i~~D~DgtL~~~~~~~   20 (137)
T 2pr7_A            2 MRGLIVDYAGVLDGTDEDQ   20 (137)
T ss_dssp             CCEEEECSTTTTSSCHHHH
T ss_pred             CcEEEEeccceecCCCccC
Confidence            4799999999998877533

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=95.25  E-value=0.0029  Score=52.11  Aligned_cols=14  Identities=50%  Similarity=0.522  Sum_probs=13.1

Q ss_pred             ceEEEecCcccccC
Q 029420            3 DLYALDFDGVLCDS   16 (193)
Q Consensus         3 ~~vlFDlDGTLvDS   16 (193)
                      ++|+||+||||+|+
T Consensus        10 ~li~~DlDGTLl~~   23 (275)
T 1xvi_A           10 LLVFSDLDGTLLDS   23 (275)
T ss_dssp             EEEEEECTTTTSCS
T ss_pred             eEEEEeCCCCCCCC
Confidence            79999999999996

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=95.15  E-value=0.013  Score=47.20  Aligned_cols=14  Identities=43%  Similarity=0.695  Sum_probs=12.4

Q ss_pred             CceEEEecCccccc
Q 029420            2 ADLYALDFDGVLCD   15 (193)
Q Consensus         2 ~~~vlFDlDGTLvD   15 (193)
                      .++|+||+||||++
T Consensus         1 ikli~~DlDGTLl~   14 (239)
T 1u02_A            1 MSLIFLDYDGTLVP   14 (239)
T ss_dssp             -CEEEEECBTTTBC
T ss_pred             CeEEEEecCCCCcC
Confidence            37899999999998

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=95.14  E-value=0.019  Score=53.55  Aligned_cols=35  Identities=9%  Similarity=0.077  Sum_probs=31.3

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      .++.|++.+.++   ++|+++.++|+++  .++.+.+.++
T Consensus       456 D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lg  495 (645)
T 3j08_A          456 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN  495 (645)
T ss_dssp             CCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHT
T ss_pred             CCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcC
Confidence            468899999999   8999999999999  8888888764

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=95.08  E-value=0.009  Score=52.50  Aligned_cols=34  Identities=15%  Similarity=-0.001  Sum_probs=31.0

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      .++|||+.++|+   ++|++++|+||++  .++.+|+++
T Consensus       214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~l  252 (384)
T 1qyi_A          214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENL  252 (384)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH
T ss_pred             CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHc
Confidence            478999999999   8899999999998  888888887

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=95.04  E-value=0.0061  Score=49.81  Aligned_cols=22  Identities=14%  Similarity=-0.001  Sum_probs=18.3

Q ss_pred             CCCCHHHHHHhCCCcEEEEcCcH
Q 029420          140 FYPGIPDALKFASSRIYIVTTKA  162 (193)
Q Consensus       140 lypGV~e~L~~~gi~laVvTnK~  162 (193)
                      .|+++.+.|+++|++ +|+||++
T Consensus       149 ~~~~l~~~L~~~g~~-~i~tn~~  170 (284)
T 2hx1_A          149 DLNKTVNLLRKRTIP-AIVANTD  170 (284)
T ss_dssp             HHHHHHHHHHHCCCC-EEEECCC
T ss_pred             cHHHHHHHHhcCCCe-EEEECCC
Confidence            567777766688999 9999998

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=95.02  E-value=0.005  Score=43.99  Aligned_cols=34  Identities=9%  Similarity=-0.036  Sum_probs=29.5

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      .++|||+.++|+   ++|++++|+||++  .++.+++++
T Consensus        17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~   55 (137)
T 2pr7_A           17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIREL   55 (137)
T ss_dssp             HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHH
T ss_pred             CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHC
Confidence            468999999999   8899999999998  777777766

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=94.86  E-value=0.011  Score=45.76  Aligned_cols=16  Identities=25%  Similarity=0.451  Sum_probs=14.2

Q ss_pred             CceEEEecCcccccCh
Q 029420            2 ADLYALDFDGVLCDSC   17 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~   17 (193)
                      .|+|+||+||||.|+-
T Consensus         9 ikliv~D~DGtL~d~~   24 (168)
T 3ewi_A            9 IKLLVCNIDGCLTNGH   24 (168)
T ss_dssp             CCEEEEECCCCCSCSC
T ss_pred             CcEEEEeCccceECCc
Confidence            5899999999999963

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=94.70  E-value=0.011  Score=46.10  Aligned_cols=15  Identities=40%  Similarity=0.547  Sum_probs=13.5

Q ss_pred             CceEEEecCcccccC
Q 029420            2 ADLYALDFDGVLCDS   16 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS   16 (193)
                      .++|+||+||||+|+
T Consensus        19 ik~vifD~DGtL~~~   33 (191)
T 3n1u_A           19 IKCLICDVDGVLSDG   33 (191)
T ss_dssp             CSEEEECSTTTTBCS
T ss_pred             CCEEEEeCCCCCCCC
Confidence            379999999999995

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=94.56  E-value=0.016  Score=43.75  Aligned_cols=26  Identities=19%  Similarity=0.192  Sum_probs=23.9

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      ..++|||+.++|+   ++|++++|+||++
T Consensus        25 ~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~   53 (179)
T 3l8h_A           25 EWIALPGSLQAIARLTQADWTVVLATNQS   53 (179)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEEEECT
T ss_pred             HceECcCHHHHHHHHHHCCCEEEEEECCC
Confidence            3689999999999   8999999999996

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=94.48  E-value=0.011  Score=46.32  Aligned_cols=37  Identities=8%  Similarity=-0.144  Sum_probs=32.3

Q ss_pred             CCCCCCCHHHHHH--hCCCcEEEEcCcH--HHHHHHHHHhH
Q 029420          137 ANRFYPGIPDALK--FASSRIYIVTTKA--VSQMLYYESLQ  173 (193)
Q Consensus       137 ~~~lypGV~e~L~--~~gi~laVvTnK~--~a~~lL~~~~~  173 (193)
                      ...++||+.++|+  .+.++++|+||++  .|+.+++.+.+
T Consensus        53 ~v~~rPg~~efL~~l~~~~~i~I~T~~~~~~a~~vl~~ld~   93 (181)
T 2ght_A           53 YVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDK   93 (181)
T ss_dssp             EEEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCT
T ss_pred             EEEeCCCHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHCC
Confidence            3678999999999  4449999999999  99999998865

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=94.43  E-value=0.013  Score=44.20  Aligned_cols=16  Identities=38%  Similarity=0.501  Sum_probs=13.9

Q ss_pred             CceEEEecCcccccCh
Q 029420            2 ADLYALDFDGVLCDSC   17 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~   17 (193)
                      .|+|+||+||||++..
T Consensus         1 ~k~v~~D~DGtL~~~~   16 (179)
T 3l8h_A            1 MKLIILDRDGVVNQDS   16 (179)
T ss_dssp             CCEEEECSBTTTBCCC
T ss_pred             CCEEEEcCCCccccCC
Confidence            3799999999999874

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=94.27  E-value=0.0093  Score=48.31  Aligned_cols=25  Identities=16%  Similarity=0.060  Sum_probs=22.2

Q ss_pred             CCCCCCCHHHHHH--hCCCcEEEEcCcH
Q 029420          137 ANRFYPGIPDALK--FASSRIYIVTTKA  162 (193)
Q Consensus       137 ~~~lypGV~e~L~--~~gi~laVvTnK~  162 (193)
                      ...+|||+.++|+  .+|+++ |+||+.
T Consensus       128 ~~~~~~~~~~~l~~L~~g~~~-i~tn~~  154 (263)
T 1zjj_A          128 PDLTYEKLKYATLAIRNGATF-IGTNPD  154 (263)
T ss_dssp             TTCBHHHHHHHHHHHHTTCEE-EESCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEE-EEECCC
Confidence            4678999999998  789998 999998

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=93.45  E-value=0.023  Score=47.07  Aligned_cols=26  Identities=8%  Similarity=0.152  Sum_probs=21.9

Q ss_pred             cCCCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          136 GANRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       136 ~~~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      +...+|||+.++|+   ++|+ ++|+||++
T Consensus       153 ~~~~~~~~~~~~l~~l~~~g~-~~i~tn~~  181 (306)
T 2oyc_A          153 DEHFSFAKLREACAHLRDPEC-LLVATDRD  181 (306)
T ss_dssp             CTTCCHHHHHHHHHHHTSTTS-EEEESCCC
T ss_pred             CCCCCHHHHHHHHHHHHcCCC-EEEEEcCC
Confidence            34567999999998   6688 99999998

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=93.27  E-value=0.03  Score=44.39  Aligned_cols=36  Identities=8%  Similarity=-0.130  Sum_probs=31.4

Q ss_pred             CCCCCCHHHHHH--hCCCcEEEEcCcH--HHHHHHHHHhH
Q 029420          138 NRFYPGIPDALK--FASSRIYIVTTKA--VSQMLYYESLQ  173 (193)
Q Consensus       138 ~~lypGV~e~L~--~~gi~laVvTnK~--~a~~lL~~~~~  173 (193)
                      ..++||+.++|+  .+.++++|+||++  .|+.+++.+.+
T Consensus        67 v~~RPgv~efL~~l~~~~~i~I~Tss~~~~a~~vl~~ld~  106 (195)
T 2hhl_A           67 VLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDR  106 (195)
T ss_dssp             EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCC
T ss_pred             EEeCcCHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCC
Confidence            578999999999  3349999999999  99999998854

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=91.68  E-value=0.064  Score=42.05  Aligned_cols=26  Identities=19%  Similarity=0.223  Sum_probs=24.0

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      ..++|||+.++|+   ++|++++|+||++
T Consensus        54 ~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~   82 (218)
T 2o2x_A           54 EIVLRPQMLPAIATANRAGIPVVVVTNQS   82 (218)
T ss_dssp             GCCBCGGGHHHHHHHHHHTCCEEEEEECH
T ss_pred             cCeECcCHHHHHHHHHHCCCEEEEEcCcC
Confidence            4689999999999   7899999999998

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=91.65  E-value=0.098  Score=40.97  Aligned_cols=16  Identities=25%  Similarity=0.183  Sum_probs=14.2

Q ss_pred             CCceEEEecCcccccC
Q 029420            1 MADLYALDFDGVLCDS   16 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS   16 (193)
                      |.++++||+||||+++
T Consensus        30 ~~k~i~~D~DGtl~~~   45 (218)
T 2o2x_A           30 HLPALFLDRDGTINVD   45 (218)
T ss_dssp             SCCCEEECSBTTTBCC
T ss_pred             cCCEEEEeCCCCcCCC
Confidence            4578999999999997

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=91.29  E-value=0.052  Score=46.95  Aligned_cols=17  Identities=35%  Similarity=0.464  Sum_probs=14.9

Q ss_pred             CCceEEEecCcccccCh
Q 029420            1 MADLYALDFDGVLCDSC   17 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~   17 (193)
                      |.++++||+||||.++-
T Consensus        12 ~~~~~l~D~DGvl~~g~   28 (352)
T 3kc2_A           12 KKIAFAFDIDGVLFRGK   28 (352)
T ss_dssp             CCEEEEECCBTTTEETT
T ss_pred             cCCEEEEECCCeeEcCC
Confidence            46889999999999875

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=90.95  E-value=0.06  Score=42.66  Aligned_cols=15  Identities=27%  Similarity=0.403  Sum_probs=13.7

Q ss_pred             ceEEEecCcccccCh
Q 029420            3 DLYALDFDGVLCDSC   17 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~   17 (193)
                      +.++||||||||+|.
T Consensus        29 ~~LVLDLD~TLvhs~   43 (195)
T 2hhl_A           29 KCVVIDLDETLVHSS   43 (195)
T ss_dssp             CEEEECCBTTTEEEE
T ss_pred             eEEEEccccceEccc
Confidence            689999999999985

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=89.13  E-value=0.13  Score=39.20  Aligned_cols=17  Identities=24%  Similarity=0.247  Sum_probs=14.2

Q ss_pred             CceEEEecCcccccChH
Q 029420            2 ADLYALDFDGVLCDSCG   18 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~   18 (193)
                      .|+++||+||||+++.+
T Consensus        14 ~k~~~~D~Dgtl~~~~~   30 (176)
T 2fpr_A           14 QKYLFIDRDGTLISEPP   30 (176)
T ss_dssp             CEEEEECSBTTTBCCC-
T ss_pred             CcEEEEeCCCCeEcCCC
Confidence            47899999999998853

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=88.30  E-value=0.13  Score=40.03  Aligned_cols=15  Identities=20%  Similarity=0.253  Sum_probs=13.6

Q ss_pred             ceEEEecCcccccCh
Q 029420            3 DLYALDFDGVLCDSC   17 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~   17 (193)
                      +.+++||||||++|.
T Consensus        16 ~~LVLDLD~TLvhs~   30 (181)
T 2ght_A           16 ICVVINLDETLVHSS   30 (181)
T ss_dssp             CEEEECCBTTTEEEE
T ss_pred             eEEEECCCCCeECCc
Confidence            689999999999984

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=85.97  E-value=0.35  Score=35.69  Aligned_cols=33  Identities=9%  Similarity=-0.127  Sum_probs=27.4

Q ss_pred             CCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          140 FYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       140 lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      +.|+..++|+   ++|++++|+||++  .++.+++++.
T Consensus        37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~g   74 (162)
T 2p9j_A           37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELG   74 (162)
T ss_dssp             EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTT
T ss_pred             ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcC
Confidence            3566778888   8899999999998  8888888763

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=81.84  E-value=1.1  Score=35.49  Aligned_cols=27  Identities=11%  Similarity=-0.036  Sum_probs=22.8

Q ss_pred             HHHHhCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          146 DALKFASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       146 e~L~~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      +.|+++|++++|+|||+  .++.++++++
T Consensus        86 ~~L~~~G~~l~I~T~~~~~~~~~~l~~lg  114 (211)
T 3ij5_A           86 RCLITSDIDVAIITGRRAKLLEDRANTLG  114 (211)
T ss_dssp             HHHHHTTCEEEEECSSCCHHHHHHHHHHT
T ss_pred             HHHHHCCCEEEEEeCCCHHHHHHHHHHcC
Confidence            34448999999999999  8999999874

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=81.44  E-value=1.2  Score=34.18  Aligned_cols=28  Identities=7%  Similarity=-0.076  Sum_probs=23.2

Q ss_pred             HHHHHhCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          145 PDALKFASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       145 ~e~L~~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      .+.|+++|++++|+||++  .++.++++++
T Consensus        55 l~~L~~~g~~~~i~T~~~~~~~~~~~~~lg   84 (189)
T 3mn1_A           55 IKMLIASGVTTAIISGRKTAIVERRAKSLG   84 (189)
T ss_dssp             HHHHHHTTCEEEEECSSCCHHHHHHHHHHT
T ss_pred             HHHHHHCCCEEEEEECcChHHHHHHHHHcC
Confidence            344448999999999999  8999998874

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=80.99  E-value=1.2  Score=33.62  Aligned_cols=29  Identities=17%  Similarity=0.069  Sum_probs=23.7

Q ss_pred             HHHHHhCCCcEEEEcCcH--HHHHHHHHHhH
Q 029420          145 PDALKFASSRIYIVTTKA--VSQMLYYESLQ  173 (193)
Q Consensus       145 ~e~L~~~gi~laVvTnK~--~a~~lL~~~~~  173 (193)
                      .+.|+++|++++|+||++  .++.++++++-
T Consensus        48 l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi   78 (176)
T 3mmz_A           48 IAALRKSGLTMLILSTEQNPVVAARARKLKI   78 (176)
T ss_dssp             HHHHHHTTCEEEEEESSCCHHHHHHHHHHTC
T ss_pred             HHHHHHCCCeEEEEECcChHHHHHHHHHcCC
Confidence            444448999999999999  89999988753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	193
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.66
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.61
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.61
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.59
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.57
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.56
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.49
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.47
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.4
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.32
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.2
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	98.98
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	98.95
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	98.95
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	98.83
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	98.81
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	98.76
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	98.62
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	98.59
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	98.52
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	98.4
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	98.39
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	98.13
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	98.06
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	98.06
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	98.02
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	97.98
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	97.56
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	97.42
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	97.2
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	97.15
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	97.07
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	97.01
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	96.76
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	96.54
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	96.52
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	96.42
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	96.41
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	96.38
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	96.33
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	96.25
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	96.25
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	96.22
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	96.22
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	96.17
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	95.92
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	95.57
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	95.38
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	94.8
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	94.57
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	93.65
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	93.42
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	92.21
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	86.28
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	85.4
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	84.62
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	84.35

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.66  E-value=1.3e-16  Score=124.97  Aligned_cols=114  Identities=15%  Similarity=0.119  Sum_probs=78.2

Q ss_pred             CC-ceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccc
Q 029420            1 MA-DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSI   79 (193)
Q Consensus         1 ~~-~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~   79 (193)
                      |+ |+|+|||||||+||.+.+..+.+.+++++      |.+..+        ++++..++...+..+. .          
T Consensus         1 M~~k~viFD~DGTL~ds~~~~~~a~~~~~~~~------g~~~~~--------~~~~~~~~~~~~~~~~-~----------   55 (207)
T d2hdoa1           1 MTYQALMFDIDGTLTNSQPAYTTVMREVLATY------GKPFSP--------AQAQKTFPMAAEQAMT-E----------   55 (207)
T ss_dssp             CCCSEEEECSBTTTEECHHHHHHHHHHHHHTT------TCCCCH--------HHHHHHTTSCHHHHHH-H----------
T ss_pred             CCCcEEEEeCCCCcCcCHHHHHHHHHHHHHHc------CCCCCH--------HHHHHHhcchhhhhhh-c----------
Confidence            77 99999999999999999999999999999      566432        3334444444333321 1          


Q ss_pred             ccccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH--hCCCcEEE
Q 029420           80 RKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIYI  157 (193)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~--~~gi~laV  157 (193)
                                                  .+.+....++....+++.+.    +. ...+++||||.++|+  +++++++|
T Consensus        56 ----------------------------~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~g~~~~L~~l~~~~~~~i  102 (207)
T d2hdoa1          56 ----------------------------LGIAASEFDHFQAQYEDVMA----SH-YDQIELYPGITSLFEQLPSELRLGI  102 (207)
T ss_dssp             ----------------------------TTCCGGGHHHHHHHHHHHHT----TC-GGGCEECTTHHHHHHHSCTTSEEEE
T ss_pred             ----------------------------cccchhhHHHHHHHhhhhhc----cc-ccccccccchhhhhhhhcccccccc
Confidence                                        11122222233333444333    22 345789999999999  77899999


Q ss_pred             EcCcH--HHHHHHHHHh
Q 029420          158 VTTKA--VSQMLYYESL  172 (193)
Q Consensus       158 vTnK~--~a~~lL~~~~  172 (193)
                      +||++  .++.+|+++.
T Consensus       103 vT~~~~~~~~~~l~~~~  119 (207)
T d2hdoa1         103 VTSQRRNELESGMRSYP  119 (207)
T ss_dssp             ECSSCHHHHHHHHTTSG
T ss_pred             ccccccccccccccccc
Confidence            99998  8888888773

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.61  E-value=2.5e-15  Score=117.09  Aligned_cols=113  Identities=17%  Similarity=0.202  Sum_probs=77.8

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchh-hccHHHHHHHHHHhhhcccccc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVV-ETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~I-g~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      +++++|||||||+||.+.+..+.+.+++++      |++..        .++++.++ +.+...++ .+....       
T Consensus         1 ~~a~iFD~DGTL~ds~~~~~~a~~~~~~~~------g~~~~--------~~~~~~~~~~~~~~~~~-~~~~~~-------   58 (204)
T d2go7a1           1 KTAFIWDLDGTLLDSYEAILSGIEETFAQF------SIPYD--------KEKVREFIFKYSVQDLL-VRVAED-------   58 (204)
T ss_dssp             CCEEEECTBTTTEECHHHHHHHHHHHHHHH------TCCCC--------HHHHHHHHHHSCHHHHH-HHHHHH-------
T ss_pred             CEEEEEcCCCcCccCHHHHHHHHHHHHHHc------CCCCC--------HHHHHHhhccccccccc-ccccch-------
Confidence            468999999999999999999999999999      66643        23344444 55555554 233211       


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                                                 .+.+.+    .+..+...+..    .......+||||.++|+   ++|++++|
T Consensus        59 ---------------------------~~~~~~----~~~~~~~~~~~----~~~~~~~~~pgv~~~L~~L~~~g~~~~v  103 (204)
T d2go7a1          59 ---------------------------RNLDVE----VLNQVRAQSLA----EKNAQVVLMPGAREVLAWADESGIQQFI  103 (204)
T ss_dssp             ---------------------------HTCCHH----HHHHHHHHHHT----TCGGGCEECTTHHHHHHHHHHTTCEEEE
T ss_pred             ---------------------------hhhhHH----HHHHHHHHHHH----hhcccCcccchHHhhhhcccccccchhh
Confidence                                       011221    22333333332    23445789999999999   89999999


Q ss_pred             EcCcH-HHHHHHHHH
Q 029420          158 VTTKA-VSQMLYYES  171 (193)
Q Consensus       158 vTnK~-~a~~lL~~~  171 (193)
                      +||++ .+..+|+++
T Consensus       104 ~Sn~~~~~~~~l~~~  118 (204)
T d2go7a1         104 YTHKGNNAFTILKDL  118 (204)
T ss_dssp             ECSSCTHHHHHHHHH
T ss_pred             hcccchhhhhhhhhc
Confidence            99999 777888877

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.61  E-value=2.2e-15  Score=117.47  Aligned_cols=113  Identities=25%  Similarity=0.224  Sum_probs=85.3

Q ss_pred             ceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccccc
Q 029420            3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKS   82 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~~   82 (193)
                      |+|+||+||||+||.+.+..+.+.+++++      |++..+       .+.+|.++|.+....+. +.+.          
T Consensus         5 k~VifD~DGTL~ds~~~~~~a~~~~~~~~------g~~~~~-------~~~~~~~~~~~~~~~~~-~~~~----------   60 (210)
T d2ah5a1           5 TAIFFDLDGTLVDSSIGIHNAFTYTFKEL------GVPSPD-------AKTIRGFMGPPLESSFA-TCLS----------   60 (210)
T ss_dssp             CEEEECSBTTTEECHHHHHHHHHHHHHHH------TCCCCC-------HHHHHHTSSSCHHHHHH-TTSC----------
T ss_pred             CEEEEeCCCccccCHHHHHHHHHHHHHHC------CCCCCC-------HHHHHHhhhcchhhhcc-cccc----------
Confidence            78999999999999999999999999999      666543       46789999998777652 2221          


Q ss_pred             cccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH--hCCCcEEEEcC
Q 029420           83 SVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIYIVTT  160 (193)
Q Consensus        83 ~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~--~~gi~laVvTn  160 (193)
                                                   .+...+....++..+...    .....++|||+.+.|+  ..+++++|+||
T Consensus        61 -----------------------------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~~~~~i~t~  107 (210)
T d2ah5a1          61 -----------------------------KDQISEAVQIYRSYYKAK----GIYEAQLFPQIIDLLEELSSSYPLYITTT  107 (210)
T ss_dssp             -----------------------------GGGHHHHHHHHHHHHHHT----GGGSCEECTTHHHHHHHHHTTSCEEEEEE
T ss_pred             -----------------------------chhhHHHHHHHHHHHHhh----hhhcccchhHHHHHHhhhhcccchhhccc
Confidence                                         112223334444444433    3456789999999999  66779999999


Q ss_pred             cH--HHHHHHHHHh
Q 029420          161 KA--VSQMLYYESL  172 (193)
Q Consensus       161 K~--~a~~lL~~~~  172 (193)
                      .+  .++.+|++++
T Consensus       108 ~~~~~~~~~l~~~g  121 (210)
T d2ah5a1         108 KDTSTAQDMAKNLE  121 (210)
T ss_dssp             EEHHHHHHHHHHTT
T ss_pred             ccchhhhHHHHhhc
Confidence            99  8888998874

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.59  E-value=5.8e-15  Score=115.32  Aligned_cols=126  Identities=18%  Similarity=0.162  Sum_probs=85.8

Q ss_pred             CC--ceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccc
Q 029420            1 MA--DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPS   78 (193)
Q Consensus         1 ~~--~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~   78 (193)
                      |.  |+|+|||||||+||.+.+..+.+.+++++      |++..+       .+.++.++|...+... .+.+...    
T Consensus         1 M~~~k~iiFD~DGTL~Ds~~~~~~a~~~~~~~~------g~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~----   62 (224)
T d2hsza1           1 MTQFKLIGFDLDGTLVNSLPDLALSINSALKDV------NLPQAS-------ENLVMTWIGNGADVLS-QRAVDWA----   62 (224)
T ss_dssp             CSSCSEEEECSBTTTEECHHHHHHHHHHHHHHT------TCCCCC-------HHHHHHHCSSCHHHHH-HHHHHHH----
T ss_pred             CCCCCEEEEeCCCCcccCHHHHHHHHHHHHHHC------CCCCCc-------HHHHHHHhhhhhhhhh-hhhhhhh----
Confidence            55  79999999999999999999999999999      666553       4668888888877665 2333210    


Q ss_pred             cccccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcE
Q 029420           79 IRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRI  155 (193)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~l  155 (193)
                                 ..    .+.         -.+..+...    .++......+........++|||+.++|+   ++|+++
T Consensus        63 -----------~~----~~~---------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~L~~~g~~~  114 (224)
T d2hsza1          63 -----------CK----QAE---------KELTEDEFK----YFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYIL  114 (224)
T ss_dssp             -----------HH----HHT---------CCCCHHHHH----HHHHHHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEE
T ss_pred             -----------hh----hhh---------hhhhHHHHH----HHHHHHHHHHHHhhccccchHHHHHHHHHHHhccCCcc
Confidence                       00    000         011222111    12222222222233556789999999999   899999


Q ss_pred             EEEcCcH--HHHHHHHHHh
Q 029420          156 YIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       156 aVvTnK~--~a~~lL~~~~  172 (193)
                      +|+||.+  .++.+|++++
T Consensus       115 ~i~tn~~~~~~~~~l~~~g  133 (224)
T d2hsza1         115 AVVTNKPTKHVQPILTAFG  133 (224)
T ss_dssp             EEECSSCHHHHHHHHHHTT
T ss_pred             cccccccHHHHHHHHHhcC
Confidence            9999999  8888988874

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.57  E-value=5.9e-15  Score=115.65  Aligned_cols=118  Identities=13%  Similarity=0.072  Sum_probs=80.5

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK   81 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~   81 (193)
                      +++++|||||||+||.+....+.+.+++++      |++..       ..+.++.+.|.+....+. ......       
T Consensus         3 i~a~iFD~DGTL~dt~~~~~~a~~~~~~~~------g~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~-------   61 (218)
T d1te2a_           3 ILAAIFDMDGLLIDSEPLWDRAELDVMASL------GVDIS-------RRNELPDTLGLRIDMVVD-LWYARQ-------   61 (218)
T ss_dssp             CCEEEECCBTTTBCCHHHHHHHHHHHHHHT------TCCGG-------GGGGSCCCTTCCHHHHHH-HHHHHS-------
T ss_pred             ceEEEECCCCcccCCHHHHHHHHHHHHHHc------CCCCC-------HHHHHHHHhCCCccchhh-hhhhcc-------
Confidence            489999999999999999989999999999      55533       235688888888776652 222110       


Q ss_pred             ccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEEE
Q 029420           82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIV  158 (193)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laVv  158 (193)
                                                 ++......+..+.+.+.+.+.+    .....+|||+.++|+   ++|++++|+
T Consensus        62 ---------------------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~pg~~~~l~~L~~~g~~~~i~  110 (218)
T d1te2a_          62 ---------------------------PWNGPSRQEVVERVIARAISLV----EETRPLLPGVREAVALCKEQGLLVGLA  110 (218)
T ss_dssp             ---------------------------CCSSSCHHHHHHHHHHHHHHHH----HHHCCBCTTHHHHHHHHHHTTCEEEEE
T ss_pred             ---------------------------cccchhHHHHHHHHHHHHHHhh----hccccccchHHHHHHHhhhcccccccc
Confidence                                       0001111122222333333221    223578999999999   899999999


Q ss_pred             cCcH--HHHHHHHHH
Q 029420          159 TTKA--VSQMLYYES  171 (193)
Q Consensus       159 TnK~--~a~~lL~~~  171 (193)
                      ||.+  .++.+++++
T Consensus       111 T~~~~~~~~~~l~~~  125 (218)
T d1te2a_         111 SASPLHMLEKVLTMF  125 (218)
T ss_dssp             ESSCHHHHHHHHHHT
T ss_pred             ccccccccccccccc
Confidence            9998  888888877

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.56  E-value=3e-15  Score=116.03  Aligned_cols=110  Identities=14%  Similarity=0.240  Sum_probs=77.7

Q ss_pred             CC-ceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccc
Q 029420            1 MA-DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSI   79 (193)
Q Consensus         1 ~~-~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~   79 (193)
                      |+ |+|+||+||||+||.+.+..+.+.+++.+      |++..        .+.++..+|.+....+ .+.. .      
T Consensus         1 M~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~~~~~~~~~-~~~~-~------   58 (187)
T d2fi1a1           1 MKYHDYIWDLGGTLLDNYETSTAAFVETLALY------GITQD--------HDSVYQALKVSTPFAI-ETFA-P------   58 (187)
T ss_dssp             CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHT------TCCCC--------HHHHHHHHHHCHHHHH-HHHC-T------
T ss_pred             CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHc------CCCcc--------HHHHHhhhhccchhhh-hhhh-H------
Confidence            66 99999999999999999999999999999      56543        2556667776654443 1111 0      


Q ss_pred             ccccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEE
Q 029420           80 RKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIY  156 (193)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~la  156 (193)
                               ..                         +...+.|++.+...     .....+||||.++|+   ++|++++
T Consensus        59 ---------~~-------------------------~~~~~~~~~~~~~~-----~~~~~~~~gv~~~l~~l~~~g~~~~   99 (187)
T d2fi1a1          59 ---------NL-------------------------ENFLEKYKENEARE-----LEHPILFEGVSDLLEDISNQGGRHF   99 (187)
T ss_dssp             ---------TC-------------------------TTHHHHHHHHHHHH-----TTSCCBCTTHHHHHHHHHHTTCEEE
T ss_pred             ---------HH-------------------------HHHHHHHHHHHHHH-----hhcCcccchhHHHHHHHHhhhcccc
Confidence                     00                         01123344444332     346789999999998   8999999


Q ss_pred             EEcCcH-HHHHHHHHH
Q 029420          157 IVTTKA-VSQMLYYES  171 (193)
Q Consensus       157 VvTnK~-~a~~lL~~~  171 (193)
                      |+||++ .+..+|+++
T Consensus       100 i~Sn~~~~~~~~l~~~  115 (187)
T d2fi1a1         100 LVSHRNDQVLEILEKT  115 (187)
T ss_dssp             EECSSCTHHHHHHHHT
T ss_pred             ccccCccchhhhhhhh
Confidence            999998 656677766

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.49  E-value=1.2e-13  Score=108.14  Aligned_cols=123  Identities=18%  Similarity=0.212  Sum_probs=84.8

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      |.|+|+||+||||+||.+.+..+.+.+++.+      |++..+       .+..+.+.|.+....+ ...+...      
T Consensus         1 MikaiiFD~DGTL~ds~~~~~~a~~~~~~~~------g~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~------   60 (221)
T d1o08a_           1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEI------GINGVD-------RQFNEQLKGVSREDSL-QKILDLA------   60 (221)
T ss_dssp             CCCEEEECCBTTTBTHHHHHHHHHHHHHHHT------TCCCCC-------HHHHTTTTTCCHHHHH-HHHHTTS------
T ss_pred             CCcEEEEcCCCCeEcCHHHHHHHHHHHHHHc------CCCCCh-------HHHHHHHhhccchhhh-hhccccc------
Confidence            8999999999999999999999999999999      565442       2345666677766654 2222110      


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcEEE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYI  157 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~laV  157 (193)
                            +                    ..++.+++.+....+.++|.+....  ....++|||+.++|+   ++|++++|
T Consensus        61 ------~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~l~~l~~~~~~i~i  112 (221)
T d1o08a_          61 ------D--------------------KKVSAEEFKELAKRKNDNYVKMIQD--VSPADVYPGILQLLKDLRSNKIKIAL  112 (221)
T ss_dssp             ------S--------------------SCCCHHHHHHHHHHHHHHHHHHTTT--CCGGGBCTTHHHHHHHHHHTTCEEEE
T ss_pred             ------c--------------------ccchhhhhhhHHHHHHhhccccccc--cccccccCCceeccccccccccceEE
Confidence                  0                    0124444555555556666554322  234679999999999   99999999


Q ss_pred             EcCcHHHHHHHHHH
Q 029420          158 VTTKAVSQMLYYES  171 (193)
Q Consensus       158 vTnK~~a~~lL~~~  171 (193)
                      +||...+..+++.+
T Consensus       113 ~s~~~~~~~~l~~~  126 (221)
T d1o08a_         113 ASASKNGPFLLERM  126 (221)
T ss_dssp             CCSCTTHHHHHHHT
T ss_pred             EeecchhhHHHHhh
Confidence            99977555666655

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.47  E-value=8e-14  Score=112.03  Aligned_cols=128  Identities=12%  Similarity=0.101  Sum_probs=83.4

Q ss_pred             CceEEEecCcccccChHH-HHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhcccccc
Q 029420            2 ADLYALDFDGVLCDSCGE-SSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR   80 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~d-i~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~   80 (193)
                      .|+|+|||||||+|+-+. ...+.+.+++++      |++..        .+++|.+.|..-...+  +.+...      
T Consensus         2 IkaviFD~dGTL~d~~~~~~~~~~~~~~~~~------g~~~~--------~~~~~~~~g~~~~~~~--~~~~~~------   59 (257)
T d1swva_           2 IEAVIFAWAGTTVDYGCFAPLEVFMEIFHKR------GVAIT--------AEEARKPMGLLKIDHV--RALTEM------   59 (257)
T ss_dssp             CCEEEECSBTTTBSTTCCTTHHHHHHHHHTT------TCCCC--------HHHHHTTTTSCHHHHH--HHHHHS------
T ss_pred             cEEEEEcCCCCeEeCcchHHHHHHHHHHHHc------CCCCC--------HHHHHHHhCCcHHHHH--HHHhhh------
Confidence            489999999999998654 366778889999      56532        3667777776544333  222220      


Q ss_pred             cccccccccHHHHhhhhcchhhhhhhhcC--CCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCCCcE
Q 029420           81 KSSVSEGLTVEGILENWSKIKPVIMEDWS--ENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRI  155 (193)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~g--~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~gi~l  155 (193)
                                ..+...|       .+.++  .+..++......+.+.|.+.    +....++|||+.++|+   ++|+++
T Consensus        60 ----------~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~L~~Lk~~g~~i  118 (257)
T d1swva_          60 ----------PRIASEW-------NRVFRQLPTEADIQEMYEEFEEILFAI----LPRYASPINGVKEVIASLRERGIKI  118 (257)
T ss_dssp             ----------HHHHHHH-------HHHHSSCCCHHHHHHHHHHHHHHHHHH----GGGGCCBCTTHHHHHHHHHHTTCEE
T ss_pred             ----------hhhhHHH-------HHHhcccCCHHHHHHHHHHHHHHHHHH----hhccCccCCcHHHHHHHHHhcccce
Confidence                      0001111       11111  23444555555555655544    3345689999999999   899999


Q ss_pred             EEEcCcH--HHHHHHHHHh
Q 029420          156 YIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       156 aVvTnK~--~a~~lL~~~~  172 (193)
                      +|+||.+  .++.+|+++.
T Consensus       119 ~i~Tn~~~~~~~~~l~~~~  137 (257)
T d1swva_         119 GSTTGYTREMMDIVAKEAA  137 (257)
T ss_dssp             EEBCSSCHHHHHHHHHHHH
T ss_pred             eecCCCchhhHHHHHHHHh
Confidence            9999999  8888888773

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.40  E-value=4.7e-13  Score=105.62  Aligned_cols=119  Identities=11%  Similarity=0.025  Sum_probs=71.1

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK   81 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~   81 (193)
                      .|+|+||+||||+||-+....+.+.++.++.     |.+...         .-..+.+.-....+ ...+..        
T Consensus         2 ~klviFD~DGTL~d~~~~~~~~~~~~~~~~~-----~~~~~~---------~~~~~~~~~~~~~~-~~~~~~--------   58 (228)
T d2hcfa1           2 RTLVLFDIDGTLLKVESMNRRVLADALIEVY-----GTEGST---------GSHDFSGKMDGAII-YEVLSN--------   58 (228)
T ss_dssp             CEEEEECCBTTTEEECTHHHHHHHHHHHHHH-----SCCCCC------------CCTTCCHHHHH-HHHHHT--------
T ss_pred             ceEEEEeCCCCcccCHHHHHHHHHHHHHHHc-----CCCccH---------HHHHHhcCchHHHH-HHHHHH--------
Confidence            4799999999999999999999998888873     222211         01112222111111 111211        


Q ss_pred             ccccccccHHHHhhhhcchhhhhhhhcCCCHHH----HHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHH---hCC-C
Q 029420           82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDA----LVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FAS-S  153 (193)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~----~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~---~~g-i  153 (193)
                                                .+++...    +....+.|...|.+.+..   ...++|||+.++|+   ++| +
T Consensus        59 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~L~~L~~~g~~  109 (228)
T d2hcfa1          59 --------------------------VGLERAEIADKFDKAKETYIALFRERARR---EDITLLEGVRELLDALSSRSDV  109 (228)
T ss_dssp             --------------------------TTCCHHHHHHHHHHHHHHHHHHHHHHCCG---GGEEECTTHHHHHHHHHTCTTE
T ss_pred             --------------------------hCCChHHHHHHHHHHHHHHHHHHHHHhhc---cCceecCchHHHHhhhhccccc
Confidence                                      1222222    223334444444433221   23579999999999   566 8


Q ss_pred             cEEEEcCcH--HHHHHHHHHh
Q 029420          154 RIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       154 ~laVvTnK~--~a~~lL~~~~  172 (193)
                      +++|+||++  .+..+|+.++
T Consensus       110 ~~~v~t~~~~~~~~~~l~~~g  130 (228)
T d2hcfa1         110 LLGLLTGNFEASGRHKLKLPG  130 (228)
T ss_dssp             EEEEECSSCHHHHHHHHHTTT
T ss_pred             cccccCCCcchhhhhhhhhhc
Confidence            999999998  7888887663

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.32  E-value=1.3e-11  Score=96.48  Aligned_cols=116  Identities=17%  Similarity=0.150  Sum_probs=78.3

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHhcCCCCCCCCcchhhhhhhhhhhccchhhccHHHHHHHHHHhhhccccccc
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK   81 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l~~~~~~gl~~~~~~~~~~~~~~vr~~Ig~G~~~ll~~~~l~~~~~~~~~~   81 (193)
                      .|+|+|||||||+||.+-...+.+.+++++      |++...       .+....+.|..+..++ .+.+...       
T Consensus         2 ~kaviFD~DGtL~dt~~~~~~a~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~-~~~~~~~-------   60 (222)
T d2fdra1           2 FDLIIFDCDGVLVDSEIIAAQVESRLLTEA------GYPISV-------EEMGERFAGMTWKNIL-LQVESEA-------   60 (222)
T ss_dssp             CSEEEECSBTTTBCCHHHHHHHHHHHHHHT------TCCCCH-------HHHHHHHTTCCHHHHH-HHHHHHH-------
T ss_pred             ceEEEECCCCcccCCHHHHHHHHHHHHHHc------CCCCCH-------HHHHHHHhhhcccccc-ccccccc-------
Confidence            489999999999999998999999999999      666432       2333556677766665 2333221       


Q ss_pred             ccccccccHHHHhhhhcchhhhhhhhcCCCHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCHHHHHHhCCCcEEEEcCc
Q 029420           82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTK  161 (193)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGV~e~L~~~gi~laVvTnK  161 (193)
                           +.+                    .+.    +.++.+..+|...+    .....++||+.++|++.+.+.+|+||.
T Consensus        61 -----~~~--------------------~~~----~~~~~~~~~~~~~~----~~~~~~~~g~~~~L~~l~~~~~i~t~~  107 (222)
T d2fdra1          61 -----SIP--------------------LSA----SLLDKSEKLLDMRL----ERDVKIIDGVKFALSRLTTPRCICSNS  107 (222)
T ss_dssp             -----CCC--------------------CCT----HHHHHHHHHHHHHH----HHHCCBCTTHHHHHHHCCSCEEEEESS
T ss_pred             -----ccc--------------------ccc----cchhHHHHHHHHHh----hhccchhhhHHHHhhhccccceeeeec
Confidence                 100                    011    12233344443332    224689999999999667788999999


Q ss_pred             H--HHHHHHHHH
Q 029420          162 A--VSQMLYYES  171 (193)
Q Consensus       162 ~--~a~~lL~~~  171 (193)
                      .  .++.+|+++
T Consensus       108 ~~~~~~~~l~~~  119 (222)
T d2fdra1         108 SSHRLDMMLTKV  119 (222)
T ss_dssp             CHHHHHHHHHHT
T ss_pred             chhhhhhhhccc
Confidence            8  888888777

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.20  E-value=4.7e-11  Score=94.10  Aligned_cols=34  Identities=15%  Similarity=0.198  Sum_probs=30.2

Q ss_pred             CCCCCCHHHHHH--hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          138 NRFYPGIPDALK--FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       138 ~~lypGV~e~L~--~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ..+|||+.++|+  ++|++++|+||.+  ..+.+++++
T Consensus        99 ~~~~p~~~~~L~~l~~~~~i~i~Sn~~~~~~~~~l~~~  136 (230)
T d1x42a1          99 GELYPEVVEVLKSLKGKYHVGMITDSDTEYLMAHLDAL  136 (230)
T ss_dssp             CCBCTTHHHHHHHHBTTBEEEEEESSCHHHHHHHHHHH
T ss_pred             CcccccHHHHHHHhhccCceeeeeccccccchhhhccc
Confidence            579999999999  7789999999988  777888876

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.98  E-value=9.1e-10  Score=86.93  Aligned_cols=35  Identities=9%  Similarity=0.031  Sum_probs=30.6

Q ss_pred             CCCCCCCHHHHHH--hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          137 ANRFYPGIPDALK--FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       137 ~~~lypGV~e~L~--~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ...+|||+.++|+  .+|++++|+||.+  ..+.+++++
T Consensus       107 ~~~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~  145 (247)
T d2gfha1         107 HMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEAC  145 (247)
T ss_dssp             TCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHH
T ss_pred             cCccCccHHHHHHHhhcccceEEeecccchhhhhhhhhc
Confidence            4679999999999  7799999999988  777778877

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=3.8e-10  Score=89.37  Aligned_cols=37  Identities=8%  Similarity=0.211  Sum_probs=33.1

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHhH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESLQ  173 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~~  173 (193)
                      ..+++||+.++++   ++|++++|||++.  +++++++.++.
T Consensus        80 ~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi  121 (217)
T d1nnla_          80 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI  121 (217)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTC
T ss_pred             ccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCC
Confidence            3579999999999   8999999999998  99999998854

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=98.95  E-value=1.3e-10  Score=91.02  Aligned_cols=35  Identities=9%  Similarity=0.112  Sum_probs=32.0

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      .+++||+.++|+   ++|++++|+||++  .++.+|++++
T Consensus        74 ~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~  113 (226)
T d2feaa1          74 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIV  113 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTS
T ss_pred             cchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcC
Confidence            579999999999   8999999999999  9999998874

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.83  E-value=3.4e-10  Score=85.93  Aligned_cols=36  Identities=14%  Similarity=0.167  Sum_probs=30.4

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH---HHHHHHHHHh
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA---VSQMLYYESL  172 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~---~a~~lL~~~~  172 (193)
                      ..++||||.++|+   ++|++++|+||++   .++.++++++
T Consensus        44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~   85 (164)
T d1u7pa_          44 NIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFD   85 (164)
T ss_dssp             EECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTT
T ss_pred             ccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhccc
Confidence            3589999999999   9999999999876   6677777764

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=1.8e-08  Score=77.98  Aligned_cols=37  Identities=19%  Similarity=0.389  Sum_probs=30.4

Q ss_pred             ccCCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          135 IGANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       135 ~~~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      .....+|||+.++|+   ++|++++|+||.+  ..+.+++..
T Consensus       123 ~~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~  164 (253)
T d1zs9a1         123 RMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS  164 (253)
T ss_dssp             SCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTB
T ss_pred             hcccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHc
Confidence            345689999999999   8999999999999  666666544

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=98.76  E-value=9.1e-09  Score=80.46  Aligned_cols=35  Identities=23%  Similarity=0.254  Sum_probs=29.6

Q ss_pred             CCCCCCCHHHHHH-hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          137 ANRFYPGIPDALK-FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       137 ~~~lypGV~e~L~-~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ...+|||+.++|+ -+++.++|+||.+  .+..+++++
T Consensus        91 ~~~~~~~~~~~L~~l~~~~~~v~s~~~~~~~~~~~~~~  128 (245)
T d1qq5a_          91 RLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVANA  128 (245)
T ss_dssp             SCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHHT
T ss_pred             ccccchhhhHHHHHHhhhceeEEeccchHHHHHHHhhc
Confidence            4689999999999 6899999999998  677777765

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=98.62  E-value=2.5e-08  Score=76.73  Aligned_cols=35  Identities=11%  Similarity=0.223  Sum_probs=29.8

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ...+||++.++|+   +.|++++|+||..  .++.++++.
T Consensus        91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~  130 (220)
T d1zrna_          91 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHA  130 (220)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT
T ss_pred             cccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhc
Confidence            4679999999999   8999999999998  666666654

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=2e-08  Score=76.55  Aligned_cols=26  Identities=15%  Similarity=-0.012  Sum_probs=23.3

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      ..+++||+.++|+   ++|++++|+||..
T Consensus        97 ~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~  125 (225)
T d1zd3a1          97 ARKINRPMLQAALMLRKKGFTTAILTNTW  125 (225)
T ss_dssp             HCEECHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             cCCCCccHHHHHHHHHhccCccccccccc
Confidence            3579999999999   8999999999976

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.52  E-value=1.6e-09  Score=83.68  Aligned_cols=28  Identities=18%  Similarity=0.038  Sum_probs=24.1

Q ss_pred             ccCCCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          135 IGANRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       135 ~~~~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      ....++|||+.++|+   ++|++++|+||..
T Consensus        93 ~~~~~~~~~~~~~L~~L~~~~~~~~i~s~~~  123 (222)
T d1cr6a1          93 MAARSINRPMLQAAIALKKKGFTTCIVTNNW  123 (222)
T ss_dssp             HHTCEECHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             HhcCCCCccHHHHHHHHHhcCCceEEeeccc
Confidence            345689999999999   9999999999854

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=98.40  E-value=5.8e-08  Score=71.19  Aligned_cols=25  Identities=16%  Similarity=0.290  Sum_probs=23.6

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      .++||||.++|+   ++|++++++||++
T Consensus        35 ~~~~p~v~~~l~~l~~~G~~Iii~T~R~   62 (149)
T d1ltqa1          35 DVINPMVVELSKMYALMGYQIVVVSGRE   62 (149)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECSC
T ss_pred             CccCHHHHHHHHHHHhccCeEEEEecCc
Confidence            578999999999   8999999999998

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.39  E-value=6.6e-08  Score=73.04  Aligned_cols=35  Identities=9%  Similarity=-0.021  Sum_probs=28.5

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ...+++|+.+.++   .+|..++++|++.  .+....+..
T Consensus        73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~  112 (210)
T d1j97a_          73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKL  112 (210)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHH
T ss_pred             hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhcc
Confidence            4689999999999   8999999999988  665555443

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=98.13  E-value=6.8e-07  Score=65.96  Aligned_cols=25  Identities=8%  Similarity=0.222  Sum_probs=22.6

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      ..++||+.+++.   .+|++++|+||-+
T Consensus        83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~  110 (197)
T d2b0ca1          83 VALRPEVIAIMHKLREQGHRVVVLSNTN  110 (197)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             cccCchhHHHHHHHHhcCCeEEEEeCcc
Confidence            578999999988   8999999999876

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=98.06  E-value=1.6e-06  Score=65.65  Aligned_cols=26  Identities=23%  Similarity=0.358  Sum_probs=23.8

Q ss_pred             CCCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          137 ANRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       137 ~~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      ..++||||.++|+   ++|++++|+||++
T Consensus        28 ~~~~~pgv~e~L~~L~~~g~~l~i~TNq~   56 (161)
T d2fpwa1          28 KLAFEPGVIPQLLKLQKAGYKLVMITNQD   56 (161)
T ss_dssp             GCCBCTTHHHHHHHHHHTTEEEEEEEECT
T ss_pred             HceECccHHHHHHHHHHcCCceeeecccc
Confidence            3579999999999   8999999999987

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.06  E-value=9e-06  Score=61.58  Aligned_cols=33  Identities=18%  Similarity=0.223  Sum_probs=23.9

Q ss_pred             ccCCCCCCCHHHHHHhCCCcEEEEcCcH-HHHHHH
Q 029420          135 IGANRFYPGIPDALKFASSRIYIVTTKA-VSQMLY  168 (193)
Q Consensus       135 ~~~~~lypGV~e~L~~~gi~laVvTnK~-~a~~lL  168 (193)
                      .....+|+++.+.+ ..+..+++.|++. ....++
T Consensus        93 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  126 (225)
T d2g80a1          93 QIKAPVYADAIDFI-KRKKRVFIYSSGSVKAQKLL  126 (225)
T ss_dssp             SCCBCCCHHHHHHH-HHCSCEEEECSSCHHHHHHH
T ss_pred             cccccchhhHHHHH-hhHHhhhhhhhccchhhhhh
Confidence            34567899999988 5666789999987 444433

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=98.02  E-value=2.2e-06  Score=65.45  Aligned_cols=29  Identities=21%  Similarity=0.364  Sum_probs=25.4

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH-HHHH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA-VSQM  166 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~-~a~~  166 (193)
                      .++||||.++|+   ++|++++|+|||+ .++.
T Consensus        26 ~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~   58 (182)
T d2gmwa1          26 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARG   58 (182)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHT
T ss_pred             eeECCCHHHHHHHHhhcCchhhhhhccchhhhh
Confidence            479999999999   8999999999999 5543

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=97.98  E-value=2.9e-06  Score=66.87  Aligned_cols=25  Identities=20%  Similarity=0.232  Sum_probs=23.2

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      .++||||.++|+   ++|++++|+||++
T Consensus        47 ~~l~pgv~e~L~~L~~~G~~l~IvTNQ~   74 (209)
T d2o2xa1          47 IVLRPQMLPAIATANRAGIPVVVVTNQS   74 (209)
T ss_dssp             CCBCGGGHHHHHHHHHHTCCEEEEEECH
T ss_pred             eEecccHHHHHHHHHhhCCeEEEecccc
Confidence            468999999999   8999999999988

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.56  E-value=5.5e-06  Score=64.13  Aligned_cols=31  Identities=32%  Similarity=0.350  Sum_probs=26.7

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      |.|+|+||+||||+|+-..+...+..+++.+
T Consensus         2 miKli~~D~DGTL~~~~~~i~~~~~~al~~l   32 (225)
T d1l6ra_           2 MIRLAAIDVDGNLTDRDRLISTKAIESIRSA   32 (225)
T ss_dssp             CCCEEEEEHHHHSBCTTSCBCHHHHHHHHHH
T ss_pred             CeEEEEEecCCCCcCCCCcCCHHHHHHHHHH
Confidence            8999999999999999887777777777666

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.42  E-value=0.00043  Score=51.08  Aligned_cols=35  Identities=14%  Similarity=0.091  Sum_probs=25.2

Q ss_pred             CCCCCCCHHHHHH--hCCCcEEEEcCcH--HHHHHHHHH
Q 029420          137 ANRFYPGIPDALK--FASSRIYIVTTKA--VSQMLYYES  171 (193)
Q Consensus       137 ~~~lypGV~e~L~--~~gi~laVvTnK~--~a~~lL~~~  171 (193)
                      ....+|+....+.  ..+.+.+++|...  ........+
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~  105 (206)
T d1rkua_          67 TLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQL  105 (206)
T ss_dssp             TCCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHT
T ss_pred             hccccchHHHHHHHhhcCceEEEeccCchHHHHHHHHHh
Confidence            3577899888888  7888899988876  444444433

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=4.2e-05  Score=58.15  Aligned_cols=30  Identities=17%  Similarity=0.122  Sum_probs=24.6

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .|+++||+||||+++-..+......+++++
T Consensus         3 ~kl~~fDlDGTLl~~~~~i~~~~~~al~~l   32 (243)
T d2amya1           3 PALCLFDVDGTLTAPRQKITKEMDDFLQKL   32 (243)
T ss_dssp             SEEEEEESBTTTBCTTSCCCHHHHHHHHHH
T ss_pred             CEEEEEcCcCCeeCCCCcCCHHHHHHHHHH
Confidence            479999999999998767767777777776

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=97.15  E-value=6.1e-05  Score=59.46  Aligned_cols=31  Identities=23%  Similarity=0.278  Sum_probs=26.2

Q ss_pred             CCceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            1 MADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      |.|+|+||+||||+++-..+......+++++
T Consensus         1 m~Kli~~DlDGTL~~~~~~i~~~~~~al~~l   31 (267)
T d1nf2a_           1 MYRVFVFDLDGTLLNDNLEISEKDRRNIEKL   31 (267)
T ss_dssp             CBCEEEEECCCCCSCTTSCCCHHHHHHHHHH
T ss_pred             CeEEEEEeCCccccCCcCccCHHHHHHHHHH
Confidence            8999999999999998776766666777776

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.07  E-value=7.7e-05  Score=56.46  Aligned_cols=30  Identities=17%  Similarity=0.182  Sum_probs=22.8

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .|+|+||+||||+++-..+...+..+++++
T Consensus         2 iK~i~~D~DGTL~~~~~~i~~~~~~~l~~l   31 (230)
T d1wr8a_           2 IKAISIDIDGTITYPNRMIHEKALEAIRRA   31 (230)
T ss_dssp             CCEEEEESTTTTBCTTSCBCHHHHHHHHHH
T ss_pred             ceEEEEecCCCCcCCCCccCHHHHHHHHHH
Confidence            489999999999998666655555565555

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.01  E-value=0.00046  Score=52.29  Aligned_cols=29  Identities=21%  Similarity=0.319  Sum_probs=22.7

Q ss_pred             cccCCCCCCCHHHHHH---hC-CCcEEEEcCcH
Q 029420          134 WIGANRFYPGIPDALK---FA-SSRIYIVTTKA  162 (193)
Q Consensus       134 ~~~~~~lypGV~e~L~---~~-gi~laVvTnK~  162 (193)
                      .....+|+||+.++|+   +. +..+.|+|+.+
T Consensus        69 ff~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~  101 (195)
T d1q92a_          69 FFFELEPLPGAVEAVKEMASLQNTDVFICTSPI  101 (195)
T ss_dssp             TTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCC
T ss_pred             HHhhCCcccCHHHHHHHHhhccCccceEEcccc
Confidence            3456689999999998   44 45788999976

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=96.76  E-value=0.00021  Score=55.89  Aligned_cols=30  Identities=27%  Similarity=0.214  Sum_probs=22.9

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .|+|+||+||||+++-..+...+..+++++
T Consensus         4 iKli~~DlDGTL~~~~~~i~~~~~~al~~L   33 (271)
T d1rkqa_           4 IKLIAIDMDGTLLLPDHTISPAVKNAIAAA   33 (271)
T ss_dssp             CCEEEECCCCCCSCTTSCCCHHHHHHHHHH
T ss_pred             eeEEEEeCCccccCCCCccCHHHHHHHHHH
Confidence            389999999999998665655555666655

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.54  E-value=0.00028  Score=53.72  Aligned_cols=18  Identities=33%  Similarity=0.349  Sum_probs=16.0

Q ss_pred             CCceEEEecCcccccChH
Q 029420            1 MADLYALDFDGVLCDSCG   18 (193)
Q Consensus         1 ~~~~vlFDlDGTLvDS~~   18 (193)
                      |.|+|+||+||||+|+-.
T Consensus         1 miKli~~DlDGTLl~~~~   18 (243)
T d1wzca1           1 MIRLIFLDIDKTLIPGYE   18 (243)
T ss_dssp             CEEEEEECCBTTTBSSSC
T ss_pred             CcEEEEEeCCCCCCCCCC
Confidence            899999999999998653

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.52  E-value=0.00033  Score=52.67  Aligned_cols=28  Identities=18%  Similarity=0.154  Sum_probs=21.6

Q ss_pred             eEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            4 LYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         4 ~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      +++||+||||+|+-..+...+..+++++
T Consensus         3 i~lFDlDGTLl~~~~~is~~~~~~i~~l   30 (244)
T d2fuea1           3 LCLFDVDGTLTPARQKIDPEVAAFLQKL   30 (244)
T ss_dssp             EEEEESBTTTBSTTSCCCHHHHHHHHHH
T ss_pred             EEEEccccCccCCCCcCCHHHHHHHHHH
Confidence            3458999999998777766666677766

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=96.42  E-value=0.00032  Score=55.03  Aligned_cols=17  Identities=29%  Similarity=0.249  Sum_probs=14.5

Q ss_pred             CceEEEecCcccccChH
Q 029420            2 ADLYALDFDGVLCDSCG   18 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~   18 (193)
                      .|+|+||+||||+|+-.
T Consensus         3 ik~VifDlDGTL~~~~~   19 (250)
T d2c4na1           3 IKNVICDIDGVLMHDNV   19 (250)
T ss_dssp             CCEEEEECBTTTEETTE
T ss_pred             CCEEEEECCCeeEECCC
Confidence            38999999999998653

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.41  E-value=0.00048  Score=53.99  Aligned_cols=30  Identities=33%  Similarity=0.407  Sum_probs=22.6

Q ss_pred             CceEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      .|+|+||+||||+++-..+...+..+++++
T Consensus         1 iKli~~DlDGTLl~~~~~i~~~~~~~l~~l   30 (285)
T d1nrwa_           1 MKLIAIDLDGTLLNSKHQVSLENENALRQA   30 (285)
T ss_dssp             CCEEEEECCCCCSCTTSCCCHHHHHHHHHH
T ss_pred             CeEEEEECCccccCCCCccCHHHHHHHHHH
Confidence            379999999999988766655555555555

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=96.38  E-value=0.00031  Score=55.11  Aligned_cols=17  Identities=29%  Similarity=0.530  Sum_probs=14.6

Q ss_pred             CceEEEecCcccccChH
Q 029420            2 ADLYALDFDGVLCDSCG   18 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~   18 (193)
                      .|+|+||+||||+|+-.
T Consensus         7 ik~vlFDlDGTL~~~~~   23 (261)
T d1vjra_           7 IELFILDMDGTFYLDDS   23 (261)
T ss_dssp             CCEEEECCBTTTEETTE
T ss_pred             CCEEEEeCCCeeEECCc
Confidence            37999999999999853

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.33  E-value=0.00092  Score=52.18  Aligned_cols=19  Identities=21%  Similarity=0.256  Sum_probs=15.6

Q ss_pred             CceEEEecCcccccChHHH
Q 029420            2 ADLYALDFDGVLCDSCGES   20 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~~di   20 (193)
                      .|+|+||+||||+|+-..+
T Consensus         2 yk~v~fDlDGTL~~~~~~i   20 (253)
T d1yv9a1           2 YQGYLIDLDGTIYLGKEPI   20 (253)
T ss_dssp             CCEEEECCBTTTEETTEEC
T ss_pred             CCEEEEcCCCccEeCCCcC
Confidence            3799999999999995444

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.25  E-value=0.00051  Score=51.52  Aligned_cols=13  Identities=46%  Similarity=0.766  Sum_probs=11.7

Q ss_pred             ceEEEecCccccc
Q 029420            3 DLYALDFDGVLCD   15 (193)
Q Consensus         3 ~~vlFDlDGTLvD   15 (193)
                      .+|+||+||||++
T Consensus         1 ~Li~~DlDGTL~~   13 (229)
T d1u02a_           1 SLIFLDYDGTLVP   13 (229)
T ss_dssp             CEEEEECBTTTBC
T ss_pred             CEEEEEecCCCCC
Confidence            3799999999997

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.25  E-value=0.002  Score=52.74  Aligned_cols=35  Identities=9%  Similarity=0.071  Sum_probs=31.3

Q ss_pred             CCCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          138 NRFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       138 ~~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      .++-||+.++++   ++|++++|+|+--  +++++++++.
T Consensus       134 i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg  173 (291)
T d2bdua1         134 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAG  173 (291)
T ss_dssp             CCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTT
T ss_pred             CCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcC
Confidence            578899999999   9999999999976  9999998874

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=96.22  E-value=0.00068  Score=52.69  Aligned_cols=30  Identities=30%  Similarity=0.367  Sum_probs=19.6

Q ss_pred             CceEEEecCcccc-cChHHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLC-DSCGESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLv-DS~~di~~a~~~al~~l   31 (193)
                      .|+|+||+||||+ |.-..+...+..+++++
T Consensus        10 ikli~~DlDGTLl~~~~~~i~~~~~~al~~l   40 (283)
T d2b30a1          10 IKLLLIDFDGTLFVDKDIKVPSENIDAIKEA   40 (283)
T ss_dssp             CCEEEEETBTTTBCCTTTCSCHHHHHHHHHH
T ss_pred             ccEEEEECCCCCcCCCCCcCCHHHHHHHHHH
Confidence            3789999999998 55434444444444444

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=96.22  E-value=0.00035  Score=52.60  Aligned_cols=31  Identities=26%  Similarity=0.158  Sum_probs=20.5

Q ss_pred             CCc--eEEEecCcccccChHHHHHHHHHHHHHh
Q 029420            1 MAD--LYALDFDGVLCDSCGESSLSAVKAAKVR   31 (193)
Q Consensus         1 ~~~--~vlFDlDGTLvDS~~di~~a~~~al~~l   31 (193)
                      |++  +|++|+||||+|+-..+...+..+++++
T Consensus         1 ~~~~~li~~DlDGTLl~~~~~i~~~~~~al~~l   33 (232)
T d1xvia_           1 IQQPLLVFSDLDGTLLDSHSYDWQPAAPWLTRL   33 (232)
T ss_dssp             CCCCEEEEEECTTTTSCSSCCSCCTTHHHHHHH
T ss_pred             CCCCEEEEEECCCCccCCcCcCCHHHHHHHHHH
Confidence            555  7888999999997644444444444444

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=96.17  E-value=0.0014  Score=51.17  Aligned_cols=29  Identities=21%  Similarity=0.228  Sum_probs=20.2

Q ss_pred             CceEEEecCcccccCh---HHHHHHHHHHHHHh
Q 029420            2 ADLYALDFDGVLCDSC---GESSLSAVKAAKVR   31 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~---~di~~a~~~al~~l   31 (193)
                      .|+|+||+||||+|+-   |....+. ..+++.
T Consensus         2 yk~vlFDlDGTL~~~~~~i~~a~e~l-~~l~~~   33 (253)
T d1wvia_           2 YKGYLIDLDGTIYKGKDRIPAGEDFV-KRLQER   33 (253)
T ss_dssp             CCEEEEECBTTTEETTEECHHHHHHH-HHHHHH
T ss_pred             cCEEEEcCcCceEECCCcCccHHHHH-HHHHHC
Confidence            3899999999999874   4433333 346666

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=95.92  E-value=0.0031  Score=48.84  Aligned_cols=16  Identities=19%  Similarity=0.455  Sum_probs=14.3

Q ss_pred             CceEEEecCcccccCh
Q 029420            2 ADLYALDFDGVLCDSC   17 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~   17 (193)
                      .|+|+||+||||+++-
T Consensus         2 IKli~~DlDGTLl~~~   17 (269)
T d1rlma_           2 VKVIVTDMDGTFLNDA   17 (269)
T ss_dssp             CCEEEECCCCCCSCTT
T ss_pred             EEEEEEeCCccCcCCC
Confidence            6899999999999864

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=95.57  E-value=0.0017  Score=50.48  Aligned_cols=15  Identities=27%  Similarity=0.408  Sum_probs=13.2

Q ss_pred             CceEEEecCcccccC
Q 029420            2 ADLYALDFDGVLCDS   16 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS   16 (193)
                      .|+|+||+||||+|.
T Consensus         1 ~k~if~DlDGTL~~~   15 (260)
T d2rbka1           1 TKALFFDIDGTLVSF   15 (260)
T ss_dssp             CCEEEECSBTTTBCT
T ss_pred             CeEEEEECCCCCcCC
Confidence            489999999999974

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.38  E-value=0.0054  Score=46.87  Aligned_cols=20  Identities=20%  Similarity=0.200  Sum_probs=15.5

Q ss_pred             CCc-eEEEecCcccccChHHH
Q 029420            1 MAD-LYALDFDGVLCDSCGES   20 (193)
Q Consensus         1 ~~~-~vlFDlDGTLvDS~~di   20 (193)
                      |.+ +++||+||||+|.-..+
T Consensus         1 m~~~li~~DlDGTL~~~~~~~   21 (244)
T d1s2oa1           1 MRQLLLISDLDNTWVGDQQAL   21 (244)
T ss_dssp             CCSEEEEECTBTTTBSCHHHH
T ss_pred             CCceEEEEECcccCCCCCCCH
Confidence            777 55679999999986544

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=94.80  E-value=0.0052  Score=51.39  Aligned_cols=34  Identities=15%  Similarity=-0.015  Sum_probs=31.0

Q ss_pred             CCCCCHHHHHH---hCCCcEEEEcCcH--HHHHHHHHHh
Q 029420          139 RFYPGIPDALK---FASSRIYIVTTKA--VSQMLYYESL  172 (193)
Q Consensus       139 ~lypGV~e~L~---~~gi~laVvTnK~--~a~~lL~~~~  172 (193)
                      +|+|||.++|+   ++|++++|+||++  .|+.++++++
T Consensus       215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lg  253 (380)
T d1qyia_         215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLG  253 (380)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHT
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence            46779999999   8999999999999  9999999984

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=94.57  E-value=0.0061  Score=43.77  Aligned_cols=15  Identities=27%  Similarity=0.470  Sum_probs=12.7

Q ss_pred             ceEEEecCcccccCh
Q 029420            3 DLYALDFDGVLCDSC   17 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~   17 (193)
                      +.|+||||||||...
T Consensus         2 K~i~~DiDGTI~~~~   16 (124)
T d1xpja_           2 KKLIVDLDGTLTQAN   16 (124)
T ss_dssp             CEEEECSTTTTBCCC
T ss_pred             CEEEEeCCCCeECCC
Confidence            468999999999864

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=93.65  E-value=0.024  Score=44.04  Aligned_cols=29  Identities=14%  Similarity=0.147  Sum_probs=24.8

Q ss_pred             cccCCCCCCCHHHHHH---hCCCcEEEEcCcH
Q 029420          134 WIGANRFYPGIPDALK---FASSRIYIVTTKA  162 (193)
Q Consensus       134 ~~~~~~lypGV~e~L~---~~gi~laVvTnK~  162 (193)
                      |...+.+-||+.++|+   ++|+++..+||..
T Consensus        81 ~~~~A~p~pga~~fl~~~~~~Gv~IfyVTnR~  112 (209)
T d2b82a1          81 WDEFSIPKEVARQLIDMHVRRGDAIFFVTGRS  112 (209)
T ss_dssp             GGGGCEECHHHHHHHHHHHHHTCEEEEEECSC
T ss_pred             cccccCcchhHHHHHHHHHHcCCeEEEEeCCc
Confidence            3445678899999999   9999999999976

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=93.42  E-value=0.011  Score=42.13  Aligned_cols=13  Identities=38%  Similarity=0.782  Sum_probs=11.2

Q ss_pred             eEEEecCcccccC
Q 029420            4 LYALDFDGVLCDS   16 (193)
Q Consensus         4 ~vlFDlDGTLvDS   16 (193)
                      .|+||||||||..
T Consensus         2 ti~vDiDGTl~~~   14 (122)
T d2obba1           2 TIAVDFDGTIVEH   14 (122)
T ss_dssp             EEEECCBTTTBCS
T ss_pred             EEEEEcCCCcCCC
Confidence            4899999999973

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=92.21  E-value=0.027  Score=42.27  Aligned_cols=15  Identities=40%  Similarity=0.592  Sum_probs=13.6

Q ss_pred             CceEEEecCcccccC
Q 029420            2 ADLYALDFDGVLCDS   16 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS   16 (193)
                      .|+++||+||||.|.
T Consensus         5 ik~~i~DvDGVlTDG   19 (177)
T d1k1ea_           5 IKFVITDVDGVLTDG   19 (177)
T ss_dssp             CCEEEEECTTTTSCS
T ss_pred             CeEEEEccCCcccCC
Confidence            379999999999996

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.28  E-value=0.23  Score=37.64  Aligned_cols=26  Identities=27%  Similarity=0.607  Sum_probs=23.0

Q ss_pred             CCCCHHHHHH---hCCCcEEEEcCcH-HHH
Q 029420          140 FYPGIPDALK---FASSRIYIVTTKA-VSQ  165 (193)
Q Consensus       140 lypGV~e~L~---~~gi~laVvTnK~-~a~  165 (193)
                      +||||.+.|+   ++|+.+.|+||.+ .++
T Consensus        51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~r   80 (195)
T d1yj5a1          51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGR   80 (195)
T ss_dssp             SCTTHHHHHHHHHHHTCEEEEEEECHHHHH
T ss_pred             ccCCHHHHHHHHHhCCcEEEEecCcchhcc
Confidence            5899999999   8999999999998 443

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.40  E-value=0.13  Score=39.16  Aligned_cols=16  Identities=31%  Similarity=0.526  Sum_probs=13.2

Q ss_pred             CceEEEecCcccccCh
Q 029420            2 ADLYALDFDGVLCDSC   17 (193)
Q Consensus         2 ~~~vlFDlDGTLvDS~   17 (193)
                      .|+++||.||||+-..
T Consensus        21 ~Kia~fDrDGtLik~~   36 (195)
T d1yj5a1          21 GKVAAFDLDGTLITTR   36 (195)
T ss_dssp             SCEEEECSBTTTEECS
T ss_pred             CcEEEEECCCceEeeC
Confidence            3789999999997643

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=84.62  E-value=0.35  Score=39.69  Aligned_cols=22  Identities=27%  Similarity=0.249  Sum_probs=18.0

Q ss_pred             ceEEEecCcccccChHHHHHHH
Q 029420            3 DLYALDFDGVLCDSCGESSLSA   24 (193)
Q Consensus         3 ~~vlFDlDGTLvDS~~di~~a~   24 (193)
                      |.|+||.||+|+|.-.-+-.|.
T Consensus         2 ~~i~fd~dGVll~~~~~~D~s~   23 (380)
T d1qyia_           2 KKILFDVDGVFLSEERCFDVSA   23 (380)
T ss_dssp             CEEEECSBTTTBCSHHHHHHHH
T ss_pred             ceEEEeCCcEEEcceeecchHh
Confidence            6899999999999987655443

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.35  E-value=0.13  Score=38.23  Aligned_cols=35  Identities=9%  Similarity=-0.111  Sum_probs=23.8

Q ss_pred             CCCCCHHHHHH--hCCCcEEEEcCcH--HHHHHHHHHhH
Q 029420          139 RFYPGIPDALK--FASSRIYIVTTKA--VSQMLYYESLQ  173 (193)
Q Consensus       139 ~lypGV~e~L~--~~gi~laVvTnK~--~a~~lL~~~~~  173 (193)
                      ..=||+.+.|+  ...+.++|-|.-.  .|+++++.+.+
T Consensus        55 ~~RP~l~eFL~~l~~~yei~I~Ta~~~~YA~~il~~ldp   93 (181)
T d1ta0a_          55 LKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDK   93 (181)
T ss_dssp             EECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCS
T ss_pred             ecCCCHHHHHHHHHhceEEEEEcCCcHHHHHHHHHHhcc
Confidence            34577777777  6667777777655  77777776644