Citrus Sinensis ID: 029423

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190---
Protein Sequence
MAGFRLPPEEPEVSPQQPPQQVRVAGDLVSDDERSVAADSWSIKSEYGSTLDDDQRHADAAEALSSAANFRANSDYNSDKEEPDPEGMASMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGYTLRFCL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccHHHHcccHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccEEEEccccHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccHccccccccEEcccccEEcccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccEEEccHHHHHHHHHHHHHHcHHHHcccccccccccccccccHHHcccccccEEEccccHHHHHHHHHHccccEEEEc
Coil and Loop (DISEMBL)
magfrlppeepevspqqppqqvrvagdlvsddersvaadSWSIkseygstldddqRHADAAEALSSAAnfransdynsdkeepdpegmasMLGLQSYWDSAYADELANFrehghagevwFGADVMDVVASWTKSLCISIsqghmlnhvedlksepveendkylsswsvldigtgNGLLLQELSKqgytlrfcl
Flexible Loop (DISEMBL)
magfrlppeepevspqqppqQVRVAGDLVSDDERSVAADSWSIKSEYGSTLDDDQRHADAAEALSsaanfransdynsDKEEPDPEGMASMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTGNGLLLQelskqgytlrfcl
Low Complexity Region (SEG)
MAGFRLppeepevspqqppqqvrvAGDLVSDDERSVAADSWSIKSEYGSTLDDDQRHadaaealssaanfraNSDYNSDKEEPDPEGMASMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGYTLRFCL
Disordered region (IsUnstruct)
*******************************************************************************************LGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDL*******NDKYLSSWSVLDIGTGNGLLLQELSKQGYTLRFC*
Disordered Region (DISOPRED)
****R***************************ERSVAADSWSIKSEYGSTLDD***************************************GLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVE*************LSSWSVLDIGTGNGLLLQELSKQGYTLRFCL
Disordered Region (DISEMBL)
***********************VAGD***********DSWSIKSEYGSTLDDDQRHADAAEALSSAANFRANS*************MASMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGYTLRFCL
Disordered Region (DISPRO)
**********************************SVAADSWSIKSEYGSTLDDDQRHADAAEALSSAANFRA*****************SMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGYTLRFCL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAGFRLPPEEPEVSPQQPPQQVRVAGDLVSDDERSVAADSWSIKSEYGSTLDDDQRHADAAEALSSAANFRANSDYNSDKEEPDPEGMASMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGYTLRFCL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	193	2.2.26 [Sep-21-2011]
Q5JPI9	291	Methyltransferase-like pr	yes	no	0.445	0.295	0.375	1e-11
Q5D013	233	Methyltransferase-like pr	yes	no	0.383	0.317	0.333	4e-10
Q9D853	244	Methyltransferase-like pr	yes	no	0.409	0.323	0.351	5e-10
Q9P7Z3	238	N-lysine methyltransferas	yes	no	0.430	0.348	0.34	3e-07

>sp|Q5JPI9|MET10_HUMAN Methyltransferase-like protein 10 OS=Homo sapiens GN=METTL10 PE=1 SV=2

 Score = 69.7 bits (169), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 26/112 (23%)

Query: 78  SDKEEPDPEGMA-SMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLC 136
           SDK  P  +G   S LG + +WD+ Y  EL  FRE+G  GE+WFG + M+ +  W     
Sbjct: 17  SDKGSPGEDGFVPSALGTREHWDAVYERELQTFREYGDTGEIWFGEESMNRLIRWM---- 72

Query: 137 ISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGYT 188
               Q H +         P++         SVLDIGTGNG+ L EL+K G++
Sbjct: 73  ----QKHKI---------PLDA--------SVLDIGTGNGVFLVELAKFGFS 103

Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q5D013|MET10_DANRE Methyltransferase-like protein 10 OS=Danio rerio GN=mettl10 PE=2 SV=1

 Score = 64.3 bits (155), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 25/99 (25%)

Query: 90  SMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVE 149
           S LG + YWD AY  EL  +++ G  GE+WFG + M  V  W                  
Sbjct: 26  SKLGTKEYWDGAYKRELQTYKDIGDVGEIWFGEESMHRVIRW------------------ 67

Query: 150 DLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGYT 188
            ++++ + EN       ++LDIGTGNG+ L EL++ G++
Sbjct: 68  -MEAQNISENA------AILDIGTGNGMFLVELARHGFS 99

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9D853|MET10_MOUSE Methyltransferase-like protein 10 OS=Mus musculus GN=Mettl10 PE=2 SV=1

 Score = 64.3 bits (155), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 32/111 (28%)

Query: 85  PEG-------MASMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCI 137
           PEG       + S LG + +WD+ Y  EL  F+E+G  GE+WFG + M+ +  W      
Sbjct: 18  PEGSSAADDFVPSALGTREHWDAVYERELRTFQEYGDTGEIWFGEESMNRLIRWM----- 72

Query: 138 SISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGYT 188
              Q H +         P++         SVLDIGTGNG+ L EL K G++
Sbjct: 73  ---QKHKI---------PLDA--------SVLDIGTGNGVFLVELVKHGFS 103

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9P7Z3|SEE1_SCHPO N-lysine methyltransferase see1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=see1 PE=2 SV=1

 Score = 55.1 bits (131), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 17/100 (17%)

Query: 90  SMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVE 149
           S LG + YWD+ Y  E++NF E    GEVWFG +  + +  W +            +H+ 
Sbjct: 7   SKLGTKQYWDNVYEREVSNFTEFNDEGEVWFGEEAEERIVQWLE------------DHIS 54

Query: 150 DLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGYTL 189
               E  E      + + VLD+GTGNG LL  L ++  TL
Sbjct: 55  TSFREVSEA-----APFRVLDLGTGNGHLLFRLLEEEDTL 89

Lysine methyltransferase.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	193
255574272	336	conserved hypothetical protein [Ricinus	0.937	0.538	0.755	8e-75
225453070	340	PREDICTED: methyltransferase-like protei	0.948	0.538	0.723	1e-73
147767550	808	hypothetical protein VITISV_013343 [Viti	0.948	0.226	0.701	2e-71
356499626	342	PREDICTED: methyltransferase-like protei	0.963	0.543	0.728	2e-71
356569031	342	PREDICTED: methyltransferase-like protei	0.963	0.543	0.728	9e-71
357508247	340	Methyltransferase-like protein [Medicago	0.943	0.535	0.710	2e-70
224124078	342	predicted protein [Populus trichocarpa]	0.948	0.535	0.764	4e-70
4760710	337	SLL2-S9-protein [Brassica rapa]	0.937	0.537	0.703	2e-67
78191462	240	SLL2-S9-protein-like [Solanum tuberosum]	0.937	0.754	0.686	2e-66
1518113	337	SLL2 [Brassica napus]	0.937	0.537	0.693	5e-66

>gi|255574272|ref|XP_002528050.1| conserved hypothetical protein [Ricinus communis] gi|223532511|gb|EEF34300.1| conserved hypothetical protein [Ricinus communis]

 Score =  285 bits (728), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 142/188 (75%), Positives = 157/188 (83%), Gaps = 7/188 (3%)

Query: 1   MAGFRLPPEEPEVSPQQPPQQVRVAGDLVSDDERSVAADSWSIKSEYGSTLDDDQRHADA 60
           MAG RL PEE ++S QQ        GDLVSDDERSVAADSWSIKS+YGSTLDDDQRHADA
Sbjct: 1   MAGIRLLPEEADLSQQQSRGGA-AGGDLVSDDERSVAADSWSIKSDYGSTLDDDQRHADA 59

Query: 61  AEALSSAANFRANSDYNSDKEEPDPEGMASMLGLQSYWDSAYADELANFREHGHAGEVWF 120
           AEALSSA NFR  SDYNSDKEEPD EG+ SMLGLQSYWDSAYADELANF EHGHAGE+WF
Sbjct: 60  AEALSSATNFRTASDYNSDKEEPDGEGVTSMLGLQSYWDSAYADELANFHEHGHAGEIWF 119

Query: 121 GADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTGNGLLLQ 180
           G+DVMDVV SWTKSLCI ISQ H+ NHV+      +E++DK L  WSVLD+GTGNGLLLQ
Sbjct: 120 GSDVMDVVVSWTKSLCIRISQDHISNHVD------IEQDDKCLPYWSVLDLGTGNGLLLQ 173

Query: 181 ELSKQGYT 188
           EL+KQG++
Sbjct: 174 ELAKQGFS 181

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453070|ref|XP_002269621.1| PREDICTED: methyltransferase-like protein 10 isoform 1 [Vitis vinifera] gi|296087211|emb|CBI33585.3| unnamed protein product [Vitis vinifera]

 Score =  280 bits (717), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 136/188 (72%), Positives = 160/188 (85%), Gaps = 5/188 (2%)

Query: 1   MAGFRLPPEEPEVSPQQPPQQVRVAGDLVSDDERSVAADSWSIKSEYGSTLDDDQRHADA 60
           MAG RLPPE+ ++   + P       DLVSDD+RSVAADSWSIKS+YGSTLDDDQRHADA
Sbjct: 1   MAGIRLPPEDSDIPQARAP----TYADLVSDDDRSVAADSWSIKSDYGSTLDDDQRHADA 56

Query: 61  AEALSSAANFRANSDYNSDKEEPDPEGMASMLGLQSYWDSAYADELANFREHGHAGEVWF 120
           ++AL+S  NFRA SDY+SDK+E D E + SMLGLQSYWD+AYADEL NFREHGH GEVWF
Sbjct: 57  SDALASG-NFRAASDYSSDKDELDSEVVTSMLGLQSYWDAAYADELTNFREHGHTGEVWF 115

Query: 121 GADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTGNGLLLQ 180
           G +VM++V SWTK+LCI ISQGHM NH++D KSEPVE+ +KYLSSWSVLDIGTGNGLLLQ
Sbjct: 116 GVEVMEIVVSWTKNLCIEISQGHMPNHLDDAKSEPVEQGEKYLSSWSVLDIGTGNGLLLQ 175

Query: 181 ELSKQGYT 188
           EL+KQG++
Sbjct: 176 ELAKQGFS 183

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147767550|emb|CAN75639.1| hypothetical protein VITISV_013343 [Vitis vinifera]

 Score =  273 bits (699), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 136/194 (70%), Positives = 159/194 (81%), Gaps = 11/194 (5%)

Query: 1   MAGFRLPPEEPEVSPQQPPQQVRVAGDLVSDDERSVAADSWSIKSEYGSTLDDDQRHADA 60
           MAG RLPPE+ ++   + P       DLVSDD+RSVAADSWSIKS+YGSTLDDDQRHADA
Sbjct: 1   MAGIRLPPEDSDIPQARAP----TXADLVSDDDRSVAADSWSIKSDYGSTLDDDQRHADA 56

Query: 61  AEALSSAANFRANSDYN------SDKEEPDPEGMASMLGLQSYWDSAYADELANFREHGH 114
           ++AL+S  NFRA SDY+      SDK+E D E + SMLGLQSYWD+AYADEL NFREHGH
Sbjct: 57  SDALASG-NFRAASDYSTYCVSSSDKDELDSEVVTSMLGLQSYWDAAYADELTNFREHGH 115

Query: 115 AGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTG 174
            GEVWFG +VM++V SWTK LCI ISQGHM NH++D KSEPVE+ +KYLSSWSVLDIGTG
Sbjct: 116 TGEVWFGVEVMEIVVSWTKXLCIEISQGHMPNHLDDAKSEPVEQGEKYLSSWSVLDIGTG 175

Query: 175 NGLLLQELSKQGYT 188
           NGLLLQEL+KQG++
Sbjct: 176 NGLLLQELAKQGFS 189

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356499626|ref|XP_003518638.1| PREDICTED: methyltransferase-like protein 10-like [Glycine max]

 Score =  273 bits (698), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 137/188 (72%), Positives = 157/188 (83%), Gaps = 2/188 (1%)

Query: 1   MAGFRLPPEEPEVSPQQPPQQVRVAGDLVSDDERSVAADSWSIKSEYGSTLDDDQRHADA 60
           MAG RL PE+ +VS QQ       A DLVSDD+RSVAADSWSIKSEYGSTLDDDQRHADA
Sbjct: 1   MAGIRLQPEDSDVS-QQSRAVALSATDLVSDDDRSVAADSWSIKSEYGSTLDDDQRHADA 59

Query: 61  AEALSSAANFRANSDYNSDKEEPDPEGMASMLGLQSYWDSAYADELANFREHGHAGEVWF 120
           AEALS+A N R  SDY+SDK+EPD E + SMLG QSYWDSAYADEL NFREHGH GEVWF
Sbjct: 60  AEALSNA-NLRPPSDYSSDKDEPDSEAVTSMLGFQSYWDSAYADELTNFREHGHTGEVWF 118

Query: 121 GADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTGNGLLLQ 180
           G DVM+VVASWTK+LC+ ISQGH+ N V+++K+E  +  DK LS+WSVLDIGTGNGLLLQ
Sbjct: 119 GVDVMEVVASWTKALCVEISQGHIPNGVDEVKAEADKLGDKVLSTWSVLDIGTGNGLLLQ 178

Query: 181 ELSKQGYT 188
           EL+KQG++
Sbjct: 179 ELAKQGFS 186

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356569031|ref|XP_003552710.1| PREDICTED: methyltransferase-like protein 10-like [Glycine max]

 Score =  271 bits (693), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 137/188 (72%), Positives = 157/188 (83%), Gaps = 2/188 (1%)

Query: 1   MAGFRLPPEEPEVSPQQPPQQVRVAGDLVSDDERSVAADSWSIKSEYGSTLDDDQRHADA 60
           MAG RL PE+ +VS QQ       A DLVSDD+RSVAADSWSIKSEYGSTLDDDQRHADA
Sbjct: 1   MAGIRLLPEDSDVS-QQSRAVPLSAADLVSDDDRSVAADSWSIKSEYGSTLDDDQRHADA 59

Query: 61  AEALSSAANFRANSDYNSDKEEPDPEGMASMLGLQSYWDSAYADELANFREHGHAGEVWF 120
           AEALS+A N R  SDY+SDK+EPD E + SMLG QSYWD+AYADEL NFREHGHAGEVWF
Sbjct: 60  AEALSNA-NLRPPSDYSSDKDEPDSEAVTSMLGFQSYWDAAYADELTNFREHGHAGEVWF 118

Query: 121 GADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTGNGLLLQ 180
           G DVM+VVASWTK+LC+ ISQG + N V+++K+E  E  DK LS+WSVLDIGTGNGLLLQ
Sbjct: 119 GVDVMEVVASWTKTLCVEISQGRIPNDVDEVKTEVDELGDKVLSTWSVLDIGTGNGLLLQ 178

Query: 181 ELSKQGYT 188
           EL+KQG++
Sbjct: 179 ELAKQGFS 186

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357508247|ref|XP_003624412.1| Methyltransferase-like protein [Medicago truncatula] gi|355499427|gb|AES80630.1| Methyltransferase-like protein [Medicago truncatula]

 Score =  270 bits (690), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 135/190 (71%), Positives = 158/190 (83%), Gaps = 8/190 (4%)

Query: 1   MAGFRLPPEEPEVSPQQPPQQVRVAG--DLVSDDERSVAADSWSIKSEYGSTLDDDQRHA 58
           MAG RL PE+ +VS     QQ R     DLVSDD+RS+AADSWSIKSEYGSTLDDDQRHA
Sbjct: 1   MAGIRLQPEDSDVS-----QQARAVALVDLVSDDDRSIAADSWSIKSEYGSTLDDDQRHA 55

Query: 59  DAAEALSSAANFRANSDYNSDKEEPDPEGMASMLGLQSYWDSAYADELANFREHGHAGEV 118
           DAAEALS+  N RA SDY+SDK+EPD E ++SMLG QSYWD+AY DEL NF EHGHAGEV
Sbjct: 56  DAAEALSNV-NLRAASDYSSDKDEPDAEAVSSMLGFQSYWDAAYTDELTNFHEHGHAGEV 114

Query: 119 WFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTGNGLL 178
           WFG +VM+VVASWTK+LCI ISQG + NHV+D+K++  E +DK LSSW+VLDIGTGNGLL
Sbjct: 115 WFGDNVMEVVASWTKTLCIDISQGRLPNHVDDVKADAGELDDKLLSSWNVLDIGTGNGLL 174

Query: 179 LQELSKQGYT 188
           LQEL+KQG++
Sbjct: 175 LQELAKQGFS 184

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124078|ref|XP_002330099.1| predicted protein [Populus trichocarpa] gi|222871233|gb|EEF08364.1| predicted protein [Populus trichocarpa]

 Score =  269 bits (688), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 146/191 (76%), Positives = 161/191 (84%), Gaps = 8/191 (4%)

Query: 1   MAGFRLPPEEPEVSPQQPPQQVRVAG---DLVSDDERSVAADSWSIKSEYGSTLDDDQRH 57
           M G RL  EE          Q+R AG   DLVSDD+RSVAADSWSIKS+YGSTLDDDQRH
Sbjct: 1   MTGIRLQQEES-----ADLTQIRAAGTGGDLVSDDDRSVAADSWSIKSDYGSTLDDDQRH 55

Query: 58  ADAAEALSSAANFRANSDYNSDKEEPDPEGMASMLGLQSYWDSAYADELANFREHGHAGE 117
           ADAAEALS+AAN RA SDY+SDKEE D EG+ASMLGLQSYWD+AYADELANF EHGHAGE
Sbjct: 56  ADAAEALSAAANCRAASDYSSDKEELDAEGVASMLGLQSYWDAAYADELANFHEHGHAGE 115

Query: 118 VWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTGNGL 177
           VWFGADVMDV+ASWTK LC  ISQG + NHV+D+KSE VEE+DKYLSSWSVLDIGTGNGL
Sbjct: 116 VWFGADVMDVIASWTKGLCFEISQGCIPNHVDDIKSETVEESDKYLSSWSVLDIGTGNGL 175

Query: 178 LLQELSKQGYT 188
           LL EL+KQG++
Sbjct: 176 LLHELAKQGFS 186

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4760710|dbj|BAA77395.1| SLL2-S9-protein [Brassica rapa]

 Score =  260 bits (664), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 133/189 (70%), Positives = 153/189 (80%), Gaps = 8/189 (4%)

Query: 1   MAGFRLPPEEPEVSPQQPPQQVRVAGD-LVSDDERSVAADSWSIKSEYGSTLDDDQRHAD 59
           MAG RL PEEPE +PQQ   Q R   D L SDD+RS+AADSWSIKSEYGSTLDDDQRHAD
Sbjct: 1   MAGIRLAPEEPETTPQQ---QARATTDSLASDDDRSIAADSWSIKSEYGSTLDDDQRHAD 57

Query: 60  AAEALSSAANFRANSDYNSDKEEPDPEGMASMLGLQSYWDSAYADELANFREHGHAGEVW 119
           AAEALSSA NFR +SDY+SDKEEPD EG  SMLGLQSYWD+AY+DEL+NFREHGH GEVW
Sbjct: 58  AAEALSSA-NFRVSSDYSSDKEEPDAEGGQSMLGLQSYWDAAYSDELSNFREHGHTGEVW 116

Query: 120 FGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTGNGLLL 179
           FG DVM++V SWTK LC+ ISQ      V D   E  ++ DKYLSSW+VLD+GTGNGLLL
Sbjct: 117 FGDDVMEIVTSWTKDLCVEISQKE--TSVSD-NGEVNDQADKYLSSWNVLDLGTGNGLLL 173

Query: 180 QELSKQGYT 188
            +L+K+G++
Sbjct: 174 HQLAKEGFS 182

Source: Brassica rapa

Species: Brassica rapa

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|78191462|gb|ABB29952.1| SLL2-S9-protein-like [Solanum tuberosum]

 Score =  257 bits (656), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 129/188 (68%), Positives = 150/188 (79%), Gaps = 7/188 (3%)

Query: 1   MAGFRLPPEEPEVSPQQPPQQVRVAGDLVSDDERSVAADSWSIKSEYGSTLDDDQRHADA 60
           M G RL PE+ +V+P +       A DL+SDD+RSVAADSWSIKSEYGSTLDD+QRHADA
Sbjct: 1   MVGMRLLPEDSDVAPARTL----AATDLISDDDRSVAADSWSIKSEYGSTLDDEQRHADA 56

Query: 61  AEALSSAANFRANSDYNSDKEEPDPEGMASMLGLQSYWDSAYADELANFREHGHAGEVWF 120
            EAL+ A N RA SDY+SDKEE D EG++SMLG QSYWDSAYADELAN+REHGHAGEVWF
Sbjct: 57  TEALA-AVNNRAASDYSSDKEEQDAEGVSSMLGFQSYWDSAYADELANYREHGHAGEVWF 115

Query: 121 GADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTGNGLLLQ 180
           GADVM++VASWT+ LC  I Q H+ NHV D +   V E D  L+ WSVLDIGTGNGLLLQ
Sbjct: 116 GADVMEIVASWTRGLCTGICQNHLSNHVGDGEQVGVHEKD--LADWSVLDIGTGNGLLLQ 173

Query: 181 ELSKQGYT 188
           E +KQG++
Sbjct: 174 EFAKQGFS 181

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1518113|gb|AAB49423.1| SLL2 [Brassica napus]

 Score =  256 bits (653), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 131/189 (69%), Positives = 152/189 (80%), Gaps = 8/189 (4%)

Query: 1   MAGFRLPPEEPEVSPQQPPQQVRVAGD-LVSDDERSVAADSWSIKSEYGSTLDDDQRHAD 59
           MAG RL PEEPE +PQQ     R   D L SDD+RS+AADSWSIKSEYGSTLDDDQRHAD
Sbjct: 1   MAGIRLAPEEPETTPQQ---HARATTDSLASDDDRSIAADSWSIKSEYGSTLDDDQRHAD 57

Query: 60  AAEALSSAANFRANSDYNSDKEEPDPEGMASMLGLQSYWDSAYADELANFREHGHAGEVW 119
           AAEALSSA NFR +SDY+SDKEEPD +G  SMLGLQSYWD+AY+DEL+NFREHGH GEVW
Sbjct: 58  AAEALSSA-NFRVSSDYSSDKEEPDADGGQSMLGLQSYWDAAYSDELSNFREHGHTGEVW 116

Query: 120 FGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTGNGLLL 179
           FG DVM++V SWTK LC+ ISQ  M   V D   E  ++ DKYLSSW+VLD+GTGN LLL
Sbjct: 117 FGDDVMEIVTSWTKDLCVEISQKEM--SVSD-NGEVNDQADKYLSSWNVLDLGTGNCLLL 173

Query: 180 QELSKQGYT 188
            +L+K+G++
Sbjct: 174 HQLAKEGFS 182

Source: Brassica napus

Species: Brassica napus

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	193
TAIR|locus:2033329	358	AR401 [Arabidopsis thaliana (t	0.829	0.446	0.641	7e-54
UNIPROTKB|Q5JPI9	291	METTL10 "Methyltransferase-lik	0.279	0.185	0.436	1.1e-14
ZFIN|ZDB-GENE-050306-30	233	mettl10 "methyltransferase lik	0.253	0.210	0.428	3.1e-12
WB|WBGene00017919	236	F29B9.1 [Caenorhabditis elegan	0.227	0.186	0.5	1.2e-11
MGI|MGI:1919346	244	Mettl10 "methyltransferase lik	0.217	0.172	0.428	3.7e-11
POMBASE|SPBC839.14c	238	SPBC839.14c "methyltransferase	0.217	0.176	0.428	2.1e-05

TAIR|locus:2033329 AR401 [Arabidopsis thaliana (taxid:3702)]

 Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
 Identities = 104/162 (64%), Positives = 126/162 (77%)

Query:    28 LVSDDERSVAADSWSIKSEYGSTLDDDQRHXXXXXXXXXXXXXXXNSDYNSDKEEPDPEG 87
             L SDD+RS+AADSWSIKSEYGSTLDDDQRH               +SDY+SDKEEPD +G
Sbjct:    33 LASDDDRSIAADSWSIKSEYGSTLDDDQRHADAAEALSSANFRV-SSDYSSDKEEPDADG 91

Query:    88 MA-SMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLN 146
                SMLGLQSYWD+AY+DEL NFREHGHAGEVWFG DVM++V SWTK LC+ ISQ +M  
Sbjct:    92 GGQSMLGLQSYWDAAYSDELTNFREHGHAGEVWFGDDVMEIVTSWTKDLCVEISQRNMSV 151

Query:   147 HVEDLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGYT 188
                D+ +E  ++ DKYLSSW+VLD+GTGNGLLL +L+K+G++
Sbjct:   152 SENDVTTEVNDQADKYLSSWNVLDLGTGNGLLLHQLAKEGFS 193

GO:0005737 "cytoplasm" evidence=ISM

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

UNIPROTKB|Q5JPI9 METTL10 "Methyltransferase-like protein 10" [Homo sapiens (taxid:9606)]

 Score = 134 (52.2 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
 Identities = 24/55 (43%), Positives = 33/55 (60%)

Query:    78 SDKEEPDPEGMA-SMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASW 131
             SDK  P  +G   S LG + +WD+ Y  EL  FRE+G  GE+WFG + M+ +  W
Sbjct:    17 SDKGSPGEDGFVPSALGTREHWDAVYERELQTFREYGDTGEIWFGEESMNRLIRW 71

GO:0008168 "methyltransferase activity" evidence=IEA

ZFIN|ZDB-GENE-050306-30 mettl10 "methyltransferase like 10" [Danio rerio (taxid:7955)]

 Score = 116 (45.9 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
 Identities = 21/49 (42%), Positives = 29/49 (59%)

Query:    90 SMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCIS 138
             S LG + YWD AY  EL  +++ G  GE+WFG + M  V  W ++  IS
Sbjct:    26 SKLGTKEYWDGAYKRELQTYKDIGDVGEIWFGEESMHRVIRWMEAQNIS 74

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0032259 "methylation" evidence=IEA

WB|WBGene00017919 F29B9.1 [Caenorhabditis elegans (taxid:6239)]

 Score = 121 (47.7 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
 Identities = 22/44 (50%), Positives = 27/44 (61%)

Query:    78 SDKEEPDPEGMASMLGLQSYWDSAYADELANFREHGHAGEVWFG 121
             SD  E   E  +S LG + +WD  Y  EL NF++HG  GEVWFG
Sbjct:     2 SDMSEQSVEIASSQLGTKDFWDQRYELELKNFKQHGDEGEVWFG 45

GO:0008152 "metabolic process" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

MGI|MGI:1919346 Mettl10 "methyltransferase like 10" [Mus musculus (taxid:10090)]

 Score = 113 (44.8 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
 Identities = 18/42 (42%), Positives = 27/42 (64%)

Query:    90 SMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASW 131
             S LG + +WD+ Y  EL  F+E+G  GE+WFG + M+ +  W
Sbjct:    30 SALGTREHWDAVYERELRTFQEYGDTGEIWFGEESMNRLIRW 71

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0032259 "methylation" evidence=IEA

POMBASE|SPBC839.14c SPBC839.14c "methyltransferase involved in endocytosis (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 112 (44.5 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 18/42 (42%), Positives = 25/42 (59%)

Query:    90 SMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASW 131
             S LG + YWD+ Y  E++NF E    GEVWFG +  + +  W
Sbjct:     7 SKLGTKQYWDNVYEREVSNFTEFNDEGEVWFGEEAEERIVQW 48


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.131   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      193       160   0.00097  106 3  11 23  0.43    32
                                                     30  0.43    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  176 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.72u 0.10s 14.82t   Elapsed:  00:00:00
  Total cpu time:  14.72u 0.10s 14.82t   Elapsed:  00:00:00
  Start:  Fri May 10 20:05:52 2013   End:  Fri May 10 20:05:52 2013

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0006897 "endocytosis" evidence=ISO

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	193
KOG1271	227	consensus Methyltransferases [General function pre	99.97
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	97.99
PRK13255	218	thiopurine S-methyltransferase; Reviewed	97.82
KOG2352	482	consensus Predicted spermine/spermidine synthase [	97.65
PF07757	112	AdoMet_MTase: Predicted AdoMet-dependent methyltra	97.64
PLN02585	315	magnesium protoporphyrin IX methyltransferase	97.47
TIGR02021	219	BchM-ChlM magnesium protoporphyrin O-methyltransfe	97.41
KOG2361	264	consensus Predicted methyltransferase [General fun	97.4
PF05724	218	TPMT: Thiopurine S-methyltransferase (TPMT); Inter	97.37
PRK13256	226	thiopurine S-methyltransferase; Reviewed	97.34
PRK07580	230	Mg-protoporphyrin IX methyl transferase; Validated	97.31
PF08003	315	Methyltransf_9: Protein of unknown function (DUF16	97.29
KOG1270	282	consensus Methyltransferases [Coenzyme transport a	97.14
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	97.0
PRK15068	322	tRNA mo(5)U34 methyltransferase; Provisional	96.91
TIGR03587	204	Pse_Me-ase pseudaminic acid biosynthesis-associate	96.57
PLN02396	322	hexaprenyldihydroxybenzoate methyltransferase	96.5
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	96.42
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	96.41
PRK12335	287	tellurite resistance protein TehB; Provisional	96.39
TIGR02072	240	BioC biotin biosynthesis protein BioC. This enzyme	96.25
TIGR00452	314	methyltransferase, putative. Known examples to dat	96.24
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	96.23
PRK10258	251	biotin biosynthesis protein BioC; Provisional	96.18
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	96.02
PF05175	170	MTS: Methyltransferase small domain; InterPro: IPR	96.01
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	95.98
COG2813	300	RsmC 16S RNA G1207 methylase RsmC [Translation, ri	95.92
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	95.84
PRK15001	378	SAM-dependent 23S ribosomal RNA mG1835 methyltrans	95.82
TIGR03534	251	RF_mod_PrmC protein-(glutamine-N5) methyltransfera	95.81
TIGR00740	239	methyltransferase, putative. A simple BLAST search	95.74
PRK14967	223	putative methyltransferase; Provisional	95.73
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	95.73
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	95.72
PRK05785	226	hypothetical protein; Provisional	95.66
PRK06202	232	hypothetical protein; Provisional	95.59
PRK09328	275	N5-glutamine S-adenosyl-L-methionine-dependent met	95.51
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	95.51
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	95.47
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	95.39
PRK04148	134	hypothetical protein; Provisional	95.38
PLN02244	340	tocopherol O-methyltransferase	95.32
PRK15451	247	tRNA cmo(5)U34 methyltransferase; Provisional	95.29
PRK05134	233	bifunctional 3-demethylubiquinone-9 3-methyltransf	95.22
PRK11088	272	rrmA 23S rRNA methyltransferase A; Provisional	95.19
COG4123	248	Predicted O-methyltransferase [General function pr	95.14
PRK03522	315	rumB 23S rRNA methyluridine methyltransferase; Rev	95.09
PRK14966	423	unknown domain/N5-glutamine S-adenosyl-L-methionin	94.99
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	94.97
TIGR00438	188	rrmJ cell division protein FtsJ.	94.8
PLN02233	261	ubiquinone biosynthesis methyltransferase	94.8
PRK00216	239	ubiE ubiquinone/menaquinone biosynthesis methyltra	94.76
PRK00274	272	ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1	94.74
TIGR01983	224	UbiG ubiquinone biosynthesis O-methyltransferase.	94.7
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	94.68
PRK11188	209	rrmJ 23S rRNA methyltransferase J; Provisional	94.63
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	94.61
TIGR00478	228	tly hemolysin TlyA family protein. Hemolysins are	94.53
COG2263	198	Predicted RNA methylase [Translation, ribosomal st	94.45
PF13679	141	Methyltransf_32: Methyltransferase domain	94.44
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	94.42
TIGR01934	223	MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis	94.41
PRK07402	196	precorrin-6B methylase; Provisional	94.39
PRK09489	342	rsmC 16S ribosomal RNA m2G1207 methyltransferase;	94.35
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	94.2
PLN02336	475	phosphoethanolamine N-methyltransferase	94.09
PRK14121	390	tRNA (guanine-N(7)-)-methyltransferase; Provisiona	94.02
PRK13168	443	rumA 23S rRNA m(5)U1939 methyltransferase; Reviewe	94.02
TIGR00095	189	RNA methyltransferase, RsmD family. This model rep	93.82
PRK04266	226	fibrillarin; Provisional	93.69
PRK10909	199	rsmD 16S rRNA m(2)G966-methyltransferase; Provisio	93.6
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	93.52
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	93.37
PRK11727	321	23S rRNA mA1618 methyltransferase; Provisional	93.36
TIGR02716	306	C20_methyl_CrtF C-20 methyltransferase BchU. Membe	93.36
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	93.35
COG4976	287	Predicted methyltransferase (contains TPR repeat)	93.34
PLN02336	475	phosphoethanolamine N-methyltransferase	93.13
TIGR02085	374	meth_trns_rumB 23S rRNA (uracil-5-)-methyltransfer	92.96
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	92.91
TIGR03704	251	PrmC_rel_meth putative protein-(glutamine-N5) meth	92.72
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	92.63
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	92.62
TIGR03438	301	probable methyltransferase. This model represents	92.61
TIGR00536	284	hemK_fam HemK family putative methylases. The gene	92.54
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	92.51
TIGR00479	431	rumA 23S rRNA (uracil-5-)-methyltransferase RumA.	92.41
PTZ00338	294	dimethyladenosine transferase-like protein; Provis	92.32
TIGR01177	329	conserved hypothetical protein TIGR01177. This fam	92.3
TIGR03533	284	L3_gln_methyl protein-(glutamine-N5) methyltransfe	92.28
COG0220	227	Predicted S-adenosylmethionine-dependent methyltra	92.26
KOG1541	270	consensus Predicted protein carboxyl methylase [Ge	91.98
PLN02490	340	MPBQ/MSBQ methyltransferase	91.88
COG2890	280	HemK Methylase of polypeptide chain release factor	91.87
smart00138	264	MeTrc Methyltransferase, chemotaxis proteins. Meth	91.73
PHA03412	241	putative methyltransferase; Provisional	91.7
PRK06922	677	hypothetical protein; Provisional	91.66
PRK11805	307	N5-glutamine S-adenosyl-L-methionine-dependent met	91.51
KOG1499	346	consensus Protein arginine N-methyltransferase PRM	91.2
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	90.9
PF05401	201	NodS: Nodulation protein S (NodS); InterPro: IPR00	90.61
PHA03411	279	putative methyltransferase; Provisional	90.43
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	90.41
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	90.39
PRK01544	506	bifunctional N5-glutamine S-adenosyl-L-methionine-	90.26
PRK01544	506	bifunctional N5-glutamine S-adenosyl-L-methionine-	89.55
PF10294	173	Methyltransf_16: Putative methyltransferase; Inter	88.84
PRK10901	427	16S rRNA methyltransferase B; Provisional	88.67
PRK00811	283	spermidine synthase; Provisional	88.28
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	87.86
PRK04457	262	spermidine synthase; Provisional	87.8
PLN02672	1082	methionine S-methyltransferase	87.38
TIGR02143	353	trmA_only tRNA (uracil-5-)-methyltransferase. This	87.33
PTZ00146	293	fibrillarin; Provisional	87.22
PF03291	331	Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971	86.81
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	85.92
KOG2798	369	consensus Putative trehalase [Carbohydrate transpo	85.19
PF00891	241	Methyltransf_2: O-methyltransferase; InterPro: IPR	85.05
COG0500	257	SmtA SAM-dependent methyltransferases [Secondary m	85.04
PLN02366	308	spermidine synthase	84.74
PF02384	311	N6_Mtase: N-6 DNA Methylase; InterPro: IPR003356 T	83.85
PRK05031	362	tRNA (uracil-5-)-methyltransferase; Validated	83.69
PRK14902	444	16S rRNA methyltransferase B; Provisional	83.21
PF05148	219	Methyltransf_8: Hypothetical methyltransferase; In	82.8
PF03141	506	Methyltransf_29: Putative S-adenosyl-L-methionine-	82.42
PF07942	270	N2227: N2227-like protein; InterPro: IPR012901 Thi	82.34
PRK11783	702	rlmL 23S rRNA m(2)G2445 methyltransferase; Provisi	82.15
PF08123	205	DOT1: Histone methylation protein DOT1 ; InterPro:	81.32
KOG2899	288	consensus Predicted methyltransferase [General fun	81.21
PRK03612	521	spermidine synthase; Provisional	81.19
PRK15128	396	23S rRNA m(5)C1962 methyltransferase; Provisional	80.39
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	80.33
TIGR02987	524	met_A_Alw26 type II restriction m6 adenine DNA met	80.13

>KOG1271 consensus Methyltransferases [General function prediction only]

Probab=99.97  E-value=4.5e-31  Score=224.69  Aligned_cols=94  Identities=50%  Similarity=0.886  Sum_probs=82.0

Q ss_pred             CCCCCCCCCCCCCCCCCcHHHHHHHHhhhhhhhccCCCCCceecCCchHHHHHHHHHhhhhhhccCcccccccccCCCcc
Q 029423           77 NSDKEEPDPEGMASMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPV  156 (193)
Q Consensus        77 ~s~k~e~~~el~pS~LGtkeYWD~~Y~~EL~NF~e~gD~GEiWFGed~~d~vv~Wlk~~~~~i~q~~ip~~~d~~~~e~~  156 (193)
                      +||++++ .++..|+||||+|||+.|++|+.||.+|||+||+|||++++.+|++||+.++. +.+  +           +
T Consensus         1 ~sdm~~~-adl~~S~LGtK~yWD~~Y~~El~Nfr~hgd~GEvWFg~~ae~riv~wl~d~~~-~~r--v-----------~   65 (227)
T KOG1271|consen    1 SSDMSEP-ADLGQSKLGTKSYWDAAYELELTNFREHGDEGEVWFGEDAEERIVDWLKDLIV-ISR--V-----------S   65 (227)
T ss_pred             CCccccc-ccccccccchHHHHHHHHHHHHhhcccCCCccceecCCcHHHHHHHHHHhhhh-hhh--h-----------c
Confidence            4788888 88999999999999999999999999999999999999999999999998763 221  1           1


Q ss_pred             ccccccCCCCceeEeeccChHhHHHHHHCCCcccc
Q 029423          157 EENDKYLSSWSVLDIGTGNGLLLQELSKQGYTLRF  191 (193)
Q Consensus       157 e~~~k~~~~~sILDLGCGNG~LL~eLak~GFs~~l  191 (193)
                          +  ...+|||||||||+||++|++.||++.|
T Consensus        66 ----~--~A~~VlDLGtGNG~~L~~L~~egf~~~L   94 (227)
T KOG1271|consen   66 ----K--QADRVLDLGTGNGHLLFQLAKEGFQSKL   94 (227)
T ss_pred             ----c--cccceeeccCCchHHHHHHHHhcCCCCc
Confidence                1  1238999999999999999999999864

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=97.99  E-value=7.9e-06  Score=69.13  Aligned_cols=26  Identities=27%  Similarity=0.152  Sum_probs=23.4

Q ss_pred             CCceeEeeccChHhHHHHHHCCCccc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYTLR  190 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs~~  190 (193)
                      ..+|||+|||.|.-..-|+++||...
T Consensus        35 ~~rvLd~GCG~G~da~~LA~~G~~V~   60 (213)
T TIGR03840        35 GARVFVPLCGKSLDLAWLAEQGHRVL   60 (213)
T ss_pred             CCeEEEeCCCchhHHHHHHhCCCeEE
Confidence            45899999999999999999999753

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=97.82  E-value=2.6e-05  Score=66.20  Aligned_cols=62  Identities=18%  Similarity=0.280  Sum_probs=42.8

Q ss_pred             cHHHHHHHHhhhhhhhccCCCCCceecCCchHHHHHHHHHhhhhhhccCcccccccccCCCccccccccCCCCceeEeec
Q 029423           94 LQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGT  173 (193)
Q Consensus        94 tkeYWD~~Y~~EL~NF~e~gD~GEiWFGed~~d~vv~Wlk~~~~~i~q~~ip~~~d~~~~e~~e~~~k~~~~~sILDLGC  173 (193)
                      +.++||++|.+....          |=+...-..+++|+..+.       +                  .+..+|||+||
T Consensus         2 ~~~~Wd~rw~~~~~~----------~~~~~p~~~L~~~~~~~~-------~------------------~~~~rvL~~gC   46 (218)
T PRK13255          2 DPDFWHEKWAENQIG----------FHQEEVNPLLQKYWPALA-------L------------------PAGSRVLVPLC   46 (218)
T ss_pred             CHhHHHHHHcCCCCC----------CCCCCCCHHHHHHHHhhC-------C------------------CCCCeEEEeCC
Confidence            367999999875433          333333345667664321       1                  12458999999


Q ss_pred             cChHhHHHHHHCCCccc
Q 029423          174 GNGLLLQELSKQGYTLR  190 (193)
Q Consensus       174 GNG~LL~eLak~GFs~~  190 (193)
                      |.|.-+.-|+++||...
T Consensus        47 G~G~da~~LA~~G~~V~   63 (218)
T PRK13255         47 GKSLDMLWLAEQGHEVL   63 (218)
T ss_pred             CChHhHHHHHhCCCeEE
Confidence            99999999999999753

>KOG2352 consensus Predicted spermine/spermidine synthase [Amino acid transport and metabolism]

Probab=97.65  E-value=2.4e-05  Score=74.57  Aligned_cols=64  Identities=27%  Similarity=0.566  Sum_probs=48.4

Q ss_pred             CCCCCcHHHHHHHHhhh-hhhhccCCCCCceecCCchH--HHHHHHHHhhhhhhccCcccccccccCCCccccccccCCC
Q 029423           89 ASMLGLQSYWDSAYADE-LANFREHGHAGEVWFGADVM--DVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSS  165 (193)
Q Consensus        89 pS~LGtkeYWD~~Y~~E-L~NF~e~gD~GEiWFGed~~--d~vv~Wlk~~~~~i~q~~ip~~~d~~~~e~~e~~~k~~~~  165 (193)
                      .-.+++..|||.+|... ..+|        +||++...  ..|..+++                              +.
T Consensus         7 ~~~~~s~~~wd~rf~~rg~~~~--------ewY~~~l~l~~~i~~~~~------------------------------p~   48 (482)
T KOG2352|consen    7 QLSFGSVVYWDKRFQPRGSDPF--------EWYGALLSLSGSIMKYLS------------------------------PS   48 (482)
T ss_pred             ccccCcchhhhhhccccCCChH--------HHHHHHHHHHHHHHHhhc------------------------------hh
Confidence            34578899999999876 5677        79988442  34444331                              12


Q ss_pred             -CceeEeeccChHhHHHHHHCCCccc
Q 029423          166 -WSVLDIGTGNGLLLQELSKQGYTLR  190 (193)
Q Consensus       166 -~sILDLGCGNG~LL~eLak~GFs~~  190 (193)
                       .+||-+||||+.|...|++.||..-
T Consensus        49 ~~~~l~lGCGNS~l~e~ly~~G~~dI   74 (482)
T KOG2352|consen   49 DFKILQLGCGNSELSEHLYKNGFEDI   74 (482)
T ss_pred             hceeEeecCCCCHHHHHHHhcCCCCc
Confidence             3899999999999999999999764

>PF07757 AdoMet_MTase: Predicted AdoMet-dependent methyltransferase; InterPro: IPR011671 tRNA (uracil-O(2)-)-methyltransferase catalyses the formation of O(2)-methyl-uracil at position 44 (m2U44) in tRNA(Ser) []

Probab=97.64  E-value=3.7e-05  Score=60.91  Aligned_cols=25  Identities=40%  Similarity=0.662  Sum_probs=23.2

Q ss_pred             CCceeEeeccChHhHHHHHHCCCcc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYTL  189 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs~  189 (193)
                      ...+.|||||||+|-.-|.++||.|
T Consensus        59 ~~~FVDlGCGNGLLV~IL~~EGy~G   83 (112)
T PF07757_consen   59 FQGFVDLGCGNGLLVYILNSEGYPG   83 (112)
T ss_pred             CCceEEccCCchHHHHHHHhCCCCc
Confidence            4579999999999999999999987

; GO: 0008168 methyltransferase activity

>PLN02585 magnesium protoporphyrin IX methyltransferase

Probab=97.47  E-value=0.00018  Score=64.71  Aligned_cols=24  Identities=33%  Similarity=0.441  Sum_probs=21.8

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.+...|++.|+.
T Consensus       145 ~~~VLDlGcGtG~~a~~la~~g~~  168 (315)
T PLN02585        145 GVTVCDAGCGTGSLAIPLALEGAI  168 (315)
T ss_pred             CCEEEEecCCCCHHHHHHHHCCCE
Confidence            468999999999999999999874

>TIGR02021 BchM-ChlM magnesium protoporphyrin O-methyltransferase

Probab=97.41  E-value=0.00012  Score=60.52  Aligned_cols=23  Identities=52%  Similarity=0.719  Sum_probs=20.7

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.+.
T Consensus        56 ~~~vLDiGcG~G~~~~~la~~~~   78 (219)
T TIGR02021        56 GKRVLDAGCGTGLLSIELAKRGA   78 (219)
T ss_pred             CCEEEEEeCCCCHHHHHHHHCCC
Confidence            56899999999999999998865

This model represents the S-adenosylmethionine-dependent O-methyltransferase responsible for methylation of magnesium protoporphyrin IX. This step is essentiasl for the biosynthesis of both chlorophyll and bacteriochlorophyll. This model encompasses two closely related clades, from cyanobacteria (and plants) where it is called ChlM and other photosynthetic bacteria where it is known as BchM.

>KOG2361 consensus Predicted methyltransferase [General function prediction only]

Probab=97.40  E-value=0.0001  Score=65.60  Aligned_cols=58  Identities=28%  Similarity=0.468  Sum_probs=40.2

Q ss_pred             cHHHHHHHHhhhhhhhccCCCCCceecCCchHHHHHHHHHhhhhhhccCcccccccccCCCccccccccCCCCceeEeec
Q 029423           94 LQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGT  173 (193)
Q Consensus        94 tkeYWD~~Y~~EL~NF~e~gD~GEiWFGed~~d~vv~Wlk~~~~~i~q~~ip~~~d~~~~e~~e~~~k~~~~~sILDLGC  173 (193)
                      .+.|||.+|....++|          |    .+|  +||.+...+|.    |.            .++  ..-+||.|||
T Consensus        35 ~~k~wD~fy~~~~~rF----------f----kdR--~wL~~Efpel~----~~------------~~~--~~~~ilEvGC   80 (264)
T KOG2361|consen   35 ASKYWDTFYKIHENRF----------F----KDR--NWLLREFPELL----PV------------DEK--SAETILEVGC   80 (264)
T ss_pred             hhhhhhhhhhhccccc----------c----chh--HHHHHhhHHhh----Cc------------ccc--Chhhheeecc
Confidence            3569999999888777          6    344  68876543322    11            011  1127999999


Q ss_pred             cChHhHHHHHHC
Q 029423          174 GNGLLLQELSKQ  185 (193)
Q Consensus       174 GNG~LL~eLak~  185 (193)
                      |+|.+.+.|.+.
T Consensus        81 GvGNtvfPll~~   92 (264)
T KOG2361|consen   81 GVGNTVFPLLKT   92 (264)
T ss_pred             CCCcccchhhhc
Confidence            999999999875

>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes

Probab=97.37  E-value=0.00016  Score=61.75  Aligned_cols=61  Identities=20%  Similarity=0.375  Sum_probs=42.9

Q ss_pred             cHHHHHHHHhhhhhhhccCCCCCceecCCchHHHHHHHHHhhhhhhccCcccccccccCCCccccccccCCCCceeEeec
Q 029423           94 LQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGT  173 (193)
Q Consensus        94 tkeYWD~~Y~~EL~NF~e~gD~GEiWFGed~~d~vv~Wlk~~~~~i~q~~ip~~~d~~~~e~~e~~~k~~~~~sILDLGC  173 (193)
                      +.+||+++|.+....          |-.......+++|+.++.       .                  ....+||..||
T Consensus         2 ~~~~W~~~w~~~~~~----------w~~~~~~p~L~~~~~~l~-------~------------------~~~~rvLvPgC   46 (218)
T PF05724_consen    2 DPEFWEERWQEGQTP----------WDQGEPNPALVEYLDSLA-------L------------------KPGGRVLVPGC   46 (218)
T ss_dssp             HHHHHHHHHHTT--T----------T--TTSTHHHHHHHHHHT-------T------------------STSEEEEETTT
T ss_pred             CHHHHHHHHhcCCCC----------CCCCCCCHHHHHHHHhcC-------C------------------CCCCeEEEeCC
Confidence            468999999986544          444444456777775421       0                  23468999999


Q ss_pred             cChHhHHHHHHCCCcc
Q 029423          174 GNGLLLQELSKQGYTL  189 (193)
Q Consensus       174 GNG~LL~eLak~GFs~  189 (193)
                      |.|+-+.-|+++||..
T Consensus        47 G~g~D~~~La~~G~~V   62 (218)
T PF05724_consen   47 GKGYDMLWLAEQGHDV   62 (218)
T ss_dssp             TTSCHHHHHHHTTEEE
T ss_pred             CChHHHHHHHHCCCeE
Confidence            9999999999999964

Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.

>PRK13256 thiopurine S-methyltransferase; Reviewed

Probab=97.34  E-value=0.00038  Score=60.28  Aligned_cols=61  Identities=11%  Similarity=0.140  Sum_probs=44.4

Q ss_pred             cHHHHHHHHhhhhhhhccCCCCCceecCCchHHHHHHHHHhhhhhhccCcccccccccCCCccccccccCCCCceeEeec
Q 029423           94 LQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGT  173 (193)
Q Consensus        94 tkeYWD~~Y~~EL~NF~e~gD~GEiWFGed~~d~vv~Wlk~~~~~i~q~~ip~~~d~~~~e~~e~~~k~~~~~sILDLGC  173 (193)
                      ..+||+++|.+....          |.+...-.-+++|+.++.       .                  .+..+||+.||
T Consensus         8 ~~~fW~~rw~~~~~~----------f~~~~pnp~L~~~~~~l~-------~------------------~~~~rvLvPgC   52 (226)
T PRK13256          8 NNQYWLDRWQNDDVG----------FCQESPNEFLVKHFSKLN-------I------------------NDSSVCLIPMC   52 (226)
T ss_pred             CHHHHHHHHhcCCCC----------CccCCCCHHHHHHHHhcC-------C------------------CCCCeEEEeCC
Confidence            477999999875433          455554455667765421       1                  12468999999


Q ss_pred             cChHhHHHHHHCCCcc
Q 029423          174 GNGLLLQELSKQGYTL  189 (193)
Q Consensus       174 GNG~LL~eLak~GFs~  189 (193)
                      |+|.-..-|+++||..
T Consensus        53 Gkg~D~~~LA~~G~~V   68 (226)
T PRK13256         53 GCSIDMLFFLSKGVKV   68 (226)
T ss_pred             CChHHHHHHHhCCCcE
Confidence            9999999999999975

>PRK07580 Mg-protoporphyrin IX methyl transferase; Validated

Probab=97.31  E-value=0.00025  Score=58.03  Aligned_cols=24  Identities=33%  Similarity=0.540  Sum_probs=21.1

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.+...|++.|..
T Consensus        64 ~~~vLDvGcG~G~~~~~l~~~~~~   87 (230)
T PRK07580         64 GLRILDAGCGVGSLSIPLARRGAK   87 (230)
T ss_pred             CCEEEEEeCCCCHHHHHHHHcCCE
Confidence            458999999999999999988753

>PF08003 Methyltransf_9: Protein of unknown function (DUF1698); InterPro: IPR010017 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=97.29  E-value=0.00024  Score=64.80  Aligned_cols=25  Identities=36%  Similarity=0.468  Sum_probs=22.5

Q ss_pred             CCCCceeEeeccChHhHHHHHHCCC
Q 029423          163 LSSWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       163 ~~~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      +++.+|||||||||..++.|+.+|=
T Consensus       114 L~gk~VLDIGC~nGY~~frM~~~GA  138 (315)
T PF08003_consen  114 LKGKRVLDIGCNNGYYSFRMLGRGA  138 (315)
T ss_pred             cCCCEEEEecCCCcHHHHHHhhcCC
Confidence            5577999999999999999999875

The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This entry represents a set of bacterial AdoMet-dependent tRNA (mo5U34)-methyltransferases. These enzymes catalyse the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at the wobble position (34) of tRNA []. The 5-methoxyuridine is subsequently converted to uridine-5-oxyacetic acid, a modified nucleoside that is apparently necessary for the efficient decoding of G-ending Pro, Ala, and Val codons in these organisms [].; GO: 0016300 tRNA (uracil) methyltransferase activity, 0002098 tRNA wobble uridine modification

>KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism]

Probab=97.14  E-value=0.00024  Score=63.87  Aligned_cols=27  Identities=37%  Similarity=0.685  Sum_probs=23.7

Q ss_pred             CCCCceeEeeccChHhHHHHHHCCCcc
Q 029423          163 LSSWSVLDIGTGNGLLLQELSKQGYTL  189 (193)
Q Consensus       163 ~~~~sILDLGCGNG~LL~eLak~GFs~  189 (193)
                      ....+|||+|||.|+|++.|++.|++.
T Consensus        88 ~~g~~ilDvGCGgGLLSepLArlga~V  114 (282)
T KOG1270|consen   88 LLGMKILDVGCGGGLLSEPLARLGAQV  114 (282)
T ss_pred             cCCceEEEeccCccccchhhHhhCCee
Confidence            345679999999999999999999864

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=97.00  E-value=0.00045  Score=61.05  Aligned_cols=27  Identities=37%  Similarity=0.724  Sum_probs=24.3

Q ss_pred             CCCCceeEeeccChHhHHHHHHCCCcc
Q 029423          163 LSSWSVLDIGTGNGLLLQELSKQGYTL  189 (193)
Q Consensus       163 ~~~~sILDLGCGNG~LL~eLak~GFs~  189 (193)
                      ++..+|||||||-|.|+..||++|++.
T Consensus        58 l~g~~vLDvGCGgG~Lse~mAr~Ga~V   84 (243)
T COG2227          58 LPGLRVLDVGCGGGILSEPLARLGASV   84 (243)
T ss_pred             CCCCeEEEecCCccHhhHHHHHCCCee
Confidence            356799999999999999999999865

>PRK15068 tRNA mo(5)U34 methyltransferase; Provisional

Probab=96.91  E-value=0.00087  Score=59.95  Aligned_cols=25  Identities=32%  Similarity=0.550  Sum_probs=21.8

Q ss_pred             CCCceeEeeccChHhHHHHHHCCCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      +..+|||||||+|.++..|++.|..
T Consensus       122 ~g~~VLDIGCG~G~~~~~la~~g~~  146 (322)
T PRK15068        122 KGRTVLDVGCGNGYHMWRMLGAGAK  146 (322)
T ss_pred             CCCEEEEeccCCcHHHHHHHHcCCC
Confidence            3568999999999999999998753

>TIGR03587 Pse_Me-ase pseudaminic acid biosynthesis-associated methylase

Probab=96.57  E-value=0.0028  Score=53.09  Aligned_cols=21  Identities=29%  Similarity=0.471  Sum_probs=19.0

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        44 ~~~VLDiGCG~G~~~~~L~~~   64 (204)
T TIGR03587        44 IASILELGANIGMNLAALKRL   64 (204)
T ss_pred             CCcEEEEecCCCHHHHHHHHh
Confidence            457999999999999999886

Members of this small clade are methyltransferases of the pfam08241 family and are observed within operons for the biosynthesis of pseudaminic acid, a component of exopolysaccharide and flagellin glycosyl modifications. Notable among these genomes is Pseudomonas fluorescens PfO-1. Possibly one of the two hydroxyl groups of pseudaminic acid, at positions 4 and 8 is converted to a methoxy group by this enzyme

>PLN02396 hexaprenyldihydroxybenzoate methyltransferase

Probab=96.50  E-value=0.0019  Score=58.28  Aligned_cols=26  Identities=38%  Similarity=0.691  Sum_probs=22.5

Q ss_pred             CCCceeEeeccChHhHHHHHHCCCcc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGYTL  189 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GFs~  189 (193)
                      +..+|||||||+|.++..|++.|++.
T Consensus       131 ~g~~ILDIGCG~G~~s~~La~~g~~V  156 (322)
T PLN02396        131 EGLKFIDIGCGGGLLSEPLARMGATV  156 (322)
T ss_pred             CCCEEEEeeCCCCHHHHHHHHcCCEE
Confidence            45689999999999999999988753

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=96.42  E-value=0.0022  Score=57.50  Aligned_cols=25  Identities=36%  Similarity=0.563  Sum_probs=21.2

Q ss_pred             CCCceeEeeccChHhHHHHHHCCCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      +..+|||||||+|.|...-++.|-.
T Consensus       161 ~g~~vLDvG~GSGILaiaA~klGA~  185 (295)
T PF06325_consen  161 PGKRVLDVGCGSGILAIAAAKLGAK  185 (295)
T ss_dssp             TTSEEEEES-TTSHHHHHHHHTTBS
T ss_pred             CCCEEEEeCCcHHHHHHHHHHcCCC
Confidence            3568999999999999999999864

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=96.41  E-value=0.003  Score=57.22  Aligned_cols=26  Identities=35%  Similarity=0.533  Sum_probs=22.9

Q ss_pred             CCCCceeEeeccChHhHHHHHHCCCc
Q 029423          163 LSSWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       163 ~~~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ++..+|||||||.|.|..+.+|.|-.
T Consensus       161 ~~g~~vlDvGcGSGILaIAa~kLGA~  186 (300)
T COG2264         161 KKGKTVLDVGCGSGILAIAAAKLGAK  186 (300)
T ss_pred             cCCCEEEEecCChhHHHHHHHHcCCc
Confidence            34678999999999999999999864

>PRK12335 tellurite resistance protein TehB; Provisional

Probab=96.39  E-value=0.0026  Score=55.33  Aligned_cols=24  Identities=29%  Similarity=0.432  Sum_probs=21.9

Q ss_pred             CceeEeeccChHhHHHHHHCCCcc
Q 029423          166 WSVLDIGTGNGLLLQELSKQGYTL  189 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~GFs~  189 (193)
                      .+|||||||.|.++..|++.|+..
T Consensus       122 ~~vLDlGcG~G~~~~~la~~g~~V  145 (287)
T PRK12335        122 GKALDLGCGQGRNSLYLALLGFDV  145 (287)
T ss_pred             CCEEEeCCCCCHHHHHHHHCCCEE
Confidence            489999999999999999999854

>TIGR02072 BioC biotin biosynthesis protein BioC

Probab=96.25  E-value=0.0036  Score=50.55  Aligned_cols=25  Identities=44%  Similarity=0.484  Sum_probs=21.6

Q ss_pred             CCceeEeeccChHhHHHHHHCCCcc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYTL  189 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs~  189 (193)
                      ..+|||||||+|.++..|++.+...
T Consensus        35 ~~~vLDlG~G~G~~~~~l~~~~~~~   59 (240)
T TIGR02072        35 PASVLDIGCGTGYLTRALLKRFPQA   59 (240)
T ss_pred             CCeEEEECCCccHHHHHHHHhCCCC
Confidence            3579999999999999999987544

This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, is believed to carry out an enzymatic step prior to the formation of pimeloyl-CoA (although attribution of this annotation is not traceable). The enzyme appears related to methyltransferases by homology.

>TIGR00452 methyltransferase, putative

Probab=96.24  E-value=0.0033  Score=56.67  Aligned_cols=25  Identities=24%  Similarity=0.526  Sum_probs=21.8

Q ss_pred             CCCceeEeeccChHhHHHHHHCCCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      +..+|||||||+|.++..|++.|..
T Consensus       121 ~g~~VLDvGCG~G~~~~~~~~~g~~  145 (314)
T TIGR00452       121 KGRTILDVGCGSGYHMWRMLGHGAK  145 (314)
T ss_pred             CCCEEEEeccCCcHHHHHHHHcCCC
Confidence            3568999999999999999998863

Known examples to date are restricted to the proteobacteria.

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=96.23  E-value=0.0031  Score=53.57  Aligned_cols=25  Identities=32%  Similarity=0.488  Sum_probs=22.1

Q ss_pred             CCceeEeeccChHhHHHHHHCCCcc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYTL  189 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs~  189 (193)
                      ..+|||||||+|.+...|++.|...
T Consensus        45 ~~~vLDiGcG~G~~a~~la~~g~~v   69 (255)
T PRK11036         45 PLRVLDAGGGEGQTAIKLAELGHQV   69 (255)
T ss_pred             CCEEEEeCCCchHHHHHHHHcCCEE
Confidence            4589999999999999999998653

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=96.18  E-value=0.0039  Score=52.33  Aligned_cols=24  Identities=29%  Similarity=0.397  Sum_probs=20.8

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|..
T Consensus        43 ~~~vLDiGcG~G~~~~~l~~~~~~   66 (251)
T PRK10258         43 FTHVLDAGCGPGWMSRYWRERGSQ   66 (251)
T ss_pred             CCeEEEeeCCCCHHHHHHHHcCCe
Confidence            357999999999999999988753

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=96.02  E-value=0.0048  Score=52.64  Aligned_cols=25  Identities=36%  Similarity=0.586  Sum_probs=22.2

Q ss_pred             CCCceeEeeccChHhHHHHHHCCCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      +..+|||||||+|.+...+++.|..
T Consensus       119 ~~~~VLDiGcGsG~l~i~~~~~g~~  143 (250)
T PRK00517        119 PGKTVLDVGCGSGILAIAAAKLGAK  143 (250)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHcCCC
Confidence            4568999999999999999998875

>PF05175 MTS: Methyltransferase small domain; InterPro: IPR007848 This domain is found in ribosomal RNA small subunit methyltransferase C and in other methyltransferases

Probab=96.01  E-value=0.0051  Score=49.51  Aligned_cols=24  Identities=38%  Similarity=0.632  Sum_probs=21.0

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.+-.
T Consensus        32 ~~~vLDlG~G~G~i~~~la~~~~~   55 (170)
T PF05175_consen   32 GGRVLDLGCGSGVISLALAKRGPD   55 (170)
T ss_dssp             TCEEEEETSTTSHHHHHHHHTSTC
T ss_pred             CCeEEEecCChHHHHHHHHHhCCC
Confidence            457999999999999999998654

; GO: 0008168 methyltransferase activity; PDB: 1WY7_A 1DUS_A 2OZV_A 2PJD_A 1VQ1_A 1NV9_A 1SG9_C 1NV8_A 3Q87_B 3DMF_A ....

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=95.98  E-value=0.0053  Score=44.72  Aligned_cols=21  Identities=29%  Similarity=0.436  Sum_probs=19.0

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        20 ~~~vldlG~G~G~~~~~l~~~   40 (124)
T TIGR02469        20 GDVLWDIGAGSGSITIEAARL   40 (124)
T ss_pred             CCEEEEeCCCCCHHHHHHHHH
Confidence            458999999999999999986

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>COG2813 RsmC 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis]

Probab=95.92  E-value=0.005  Score=55.94  Aligned_cols=22  Identities=41%  Similarity=0.567  Sum_probs=19.7

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.|+..|++..
T Consensus       159 ~~~vlDlGCG~Gvlg~~la~~~  180 (300)
T COG2813         159 GGKVLDLGCGYGVLGLVLAKKS  180 (300)
T ss_pred             CCcEEEeCCCccHHHHHHHHhC
Confidence            4489999999999999999874

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=95.84  E-value=0.0063  Score=50.15  Aligned_cols=21  Identities=24%  Similarity=0.216  Sum_probs=19.0

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        46 ~~~vLDiGcG~G~~~~~la~~   66 (231)
T TIGR02752        46 GTSALDVCCGTADWSIALAEA   66 (231)
T ss_pred             CCEEEEeCCCcCHHHHHHHHH
Confidence            468999999999999999875

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>PRK15001 SAM-dependent 23S ribosomal RNA mG1835 methyltransferase; Provisional

Probab=95.82  E-value=0.0098  Score=55.07  Aligned_cols=21  Identities=29%  Similarity=0.548  Sum_probs=19.3

Q ss_pred             CceeEeeccChHhHHHHHHCC
Q 029423          166 WSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~G  186 (193)
                      .+|||||||||.++..|++.+
T Consensus       230 ~~VLDLGCGtGvi~i~la~~~  250 (378)
T PRK15001        230 GEIVDLGCGNGVIGLTLLDKN  250 (378)
T ss_pred             CeEEEEeccccHHHHHHHHhC
Confidence            489999999999999999874

>TIGR03534 RF_mod_PrmC protein-(glutamine-N5) methyltransferase, release factor-specific

Probab=95.81  E-value=0.0042  Score=51.28  Aligned_cols=20  Identities=45%  Similarity=0.767  Sum_probs=18.4

Q ss_pred             CceeEeeccChHhHHHHHHC
Q 029423          166 WSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~  185 (193)
                      .+|||+|||+|.++..|++.
T Consensus        89 ~~ilDig~G~G~~~~~l~~~  108 (251)
T TIGR03534        89 LRVLDLGTGSGAIALALAKE  108 (251)
T ss_pred             CeEEEEeCcHhHHHHHHHHH
Confidence            47999999999999999986

Members of this protein family are HemK (PrmC), a protein once thought to be involved in heme biosynthesis but now recognized to be a protein-glutamine methyltransferase that modifies the peptide chain release factors. All members of the seed alignment are encoded next to the release factor 1 gene (prfA) and confirmed by phylogenetic analysis. SIMBAL analysis (manuscript in prep.) shows the motif [LIV]PRx[DE]TE (in Escherichia coli, IPRPDTE) confers specificity for the release factors rather than for ribosomal protein L3.

>TIGR00740 methyltransferase, putative

Probab=95.74  E-value=0.0072  Score=50.64  Aligned_cols=21  Identities=19%  Similarity=0.308  Sum_probs=19.0

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        54 ~~~iLDlGcG~G~~~~~l~~~   74 (239)
T TIGR00740        54 DSNVYDLGCSRGAATLSARRN   74 (239)
T ss_pred             CCEEEEecCCCCHHHHHHHHh
Confidence            458999999999999999886

A simple BLAST search finds all members of this family and weaker hits to a large number of known and predicted methyltransferases. A single iteration with PSI-BLAST, keeping only clear members of the family, leads to a large number of highly significant hits to a set of known and predicted methyltransferases with a large repertoire of different specifities. This model is restricted to a subfamily found so far only in the Proteobacteria, sharing consistent length, full-length homology, and on average better than 35 % identity. It is reasonable to predict equivalent function within this subfamily.

>PRK14967 putative methyltransferase; Provisional

Probab=95.73  E-value=0.0074  Score=50.36  Aligned_cols=23  Identities=35%  Similarity=0.463  Sum_probs=20.9

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||+|||+|.++..|++.|+
T Consensus        37 ~~~vLDlGcG~G~~~~~la~~~~   59 (223)
T PRK14967         37 GRRVLDLCTGSGALAVAAAAAGA   59 (223)
T ss_pred             CCeEEEecCCHHHHHHHHHHcCC
Confidence            46899999999999999999875

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=95.73  E-value=0.0069  Score=50.24  Aligned_cols=21  Identities=38%  Similarity=0.534  Sum_probs=19.1

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        41 ~~~VLDiGcGtG~~~~~la~~   61 (202)
T PRK00121         41 APIHLEIGFGKGEFLVEMAKA   61 (202)
T ss_pred             CCeEEEEccCCCHHHHHHHHH
Confidence            468999999999999999886

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=95.72  E-value=0.0078  Score=52.65  Aligned_cols=24  Identities=33%  Similarity=0.525  Sum_probs=21.4

Q ss_pred             CCCceeEeeccChHhHHHHHHCCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      +..+|||||||+|.+...+++.|.
T Consensus       159 ~g~~VLDvGcGsG~lai~aa~~g~  182 (288)
T TIGR00406       159 KDKNVIDVGCGSGILSIAALKLGA  182 (288)
T ss_pred             CCCEEEEeCCChhHHHHHHHHcCC
Confidence            356899999999999999999886

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK05785 hypothetical protein; Provisional

Probab=95.66  E-value=0.0081  Score=50.92  Aligned_cols=21  Identities=33%  Similarity=0.460  Sum_probs=19.3

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        52 ~~~VLDlGcGtG~~~~~l~~~   72 (226)
T PRK05785         52 PKKVLDVAAGKGELSYHFKKV   72 (226)
T ss_pred             CCeEEEEcCCCCHHHHHHHHh
Confidence            458999999999999999988

>PRK06202 hypothetical protein; Provisional

Probab=95.59  E-value=0.0088  Score=49.87  Aligned_cols=20  Identities=40%  Similarity=0.714  Sum_probs=17.5

Q ss_pred             CCceeEeeccChHhHHHHHH
Q 029423          165 SWSVLDIGTGNGLLLQELSK  184 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak  184 (193)
                      ..+|||||||+|.++..|++
T Consensus        61 ~~~iLDlGcG~G~~~~~L~~   80 (232)
T PRK06202         61 PLTLLDIGCGGGDLAIDLAR   80 (232)
T ss_pred             CcEEEEeccCCCHHHHHHHH
Confidence            46899999999999888875

>PRK09328 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=95.51  E-value=0.0059  Score=51.48  Aligned_cols=22  Identities=41%  Similarity=0.688  Sum_probs=19.7

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||+|||+|.++..|++..
T Consensus       109 ~~~vLDiG~GsG~~~~~la~~~  130 (275)
T PRK09328        109 PLRVLDLGTGSGAIALALAKER  130 (275)
T ss_pred             CCEEEEEcCcHHHHHHHHHHHC
Confidence            4689999999999999999875

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=95.51  E-value=0.0091  Score=50.24  Aligned_cols=21  Identities=29%  Similarity=0.417  Sum_probs=19.0

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.+...|++.
T Consensus        32 ~~~vLDiGcG~G~~~~~la~~   52 (258)
T PRK01683         32 PRYVVDLGCGPGNSTELLVER   52 (258)
T ss_pred             CCEEEEEcccCCHHHHHHHHH
Confidence            468999999999999999986

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=95.47  E-value=0.011  Score=47.81  Aligned_cols=23  Identities=26%  Similarity=0.323  Sum_probs=20.0

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.+...|++.+-
T Consensus        32 ~~~vLDiG~G~G~~~~~la~~~~   54 (187)
T PRK08287         32 AKHLIDVGAGTGSVSIEAALQFP   54 (187)
T ss_pred             CCEEEEECCcCCHHHHHHHHHCC
Confidence            45899999999999999998753

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=95.39  E-value=0.0096  Score=49.02  Aligned_cols=22  Identities=32%  Similarity=0.419  Sum_probs=19.1

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.++..|+..+
T Consensus        43 ~~~vLDiGcGtG~~s~~la~~~   64 (181)
T TIGR00138        43 GKKVIDIGSGAGFPGIPLAIAR   64 (181)
T ss_pred             CCeEEEecCCCCccHHHHHHHC
Confidence            4689999999999999988654

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>PRK04148 hypothetical protein; Provisional

Probab=95.38  E-value=0.023  Score=46.05  Aligned_cols=25  Identities=16%  Similarity=0.504  Sum_probs=21.8

Q ss_pred             CCceeEeeccChH-hHHHHHHCCCcc
Q 029423          165 SWSVLDIGTGNGL-LLQELSKQGYTL  189 (193)
Q Consensus       165 ~~sILDLGCGNG~-LL~eLak~GFs~  189 (193)
                      +.+||+||||.|. +...|++.|+..
T Consensus        17 ~~kileIG~GfG~~vA~~L~~~G~~V   42 (134)
T PRK04148         17 NKKIVELGIGFYFKVAKKLKESGFDV   42 (134)
T ss_pred             CCEEEEEEecCCHHHHHHHHHCCCEE
Confidence            4579999999995 999999999865

>PLN02244 tocopherol O-methyltransferase

Probab=95.32  E-value=0.013  Score=52.62  Aligned_cols=22  Identities=23%  Similarity=0.383  Sum_probs=19.6

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||+|.++..|++.
T Consensus       118 ~~~~VLDiGCG~G~~~~~La~~  139 (340)
T PLN02244        118 RPKRIVDVGCGIGGSSRYLARK  139 (340)
T ss_pred             CCCeEEEecCCCCHHHHHHHHh
Confidence            3568999999999999999986

>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional

Probab=95.29  E-value=0.013  Score=49.91  Aligned_cols=20  Identities=20%  Similarity=0.290  Sum_probs=18.1

Q ss_pred             CCceeEeeccChHhHHHHHH
Q 029423          165 SWSVLDIGTGNGLLLQELSK  184 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak  184 (193)
                      ..+|||||||+|.++..|++
T Consensus        57 ~~~vLDlGcGtG~~~~~l~~   76 (247)
T PRK15451         57 GTQVYDLGCSLGAATLSVRR   76 (247)
T ss_pred             CCEEEEEcccCCHHHHHHHH
Confidence            46899999999999998887

>PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional

Probab=95.22  E-value=0.027  Score=46.61  Aligned_cols=23  Identities=35%  Similarity=0.690  Sum_probs=20.7

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|.+.|.
T Consensus        49 ~~~vLdiG~G~G~~~~~l~~~~~   71 (233)
T PRK05134         49 GKRVLDVGCGGGILSESMARLGA   71 (233)
T ss_pred             CCeEEEeCCCCCHHHHHHHHcCC
Confidence            56899999999999999998875

>PRK11088 rrmA 23S rRNA methyltransferase A; Provisional

Probab=95.19  E-value=0.014  Score=50.27  Aligned_cols=21  Identities=33%  Similarity=0.615  Sum_probs=18.6

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        86 ~~~vLDiGcG~G~~~~~l~~~  106 (272)
T PRK11088         86 ATALLDIGCGEGYYTHALADA  106 (272)
T ss_pred             CCeEEEECCcCCHHHHHHHHh
Confidence            357999999999999999875

>COG4123 Predicted O-methyltransferase [General function prediction only]

Probab=95.14  E-value=0.013  Score=51.94  Aligned_cols=21  Identities=38%  Similarity=0.585  Sum_probs=19.5

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||||.++..|++.
T Consensus        45 ~~~IlDlGaG~G~l~L~la~r   65 (248)
T COG4123          45 KGRILDLGAGNGALGLLLAQR   65 (248)
T ss_pred             CCeEEEecCCcCHHHHHHhcc
Confidence            578999999999999999986

>PRK03522 rumB 23S rRNA methyluridine methyltransferase; Reviewed

Probab=95.09  E-value=0.025  Score=50.08  Aligned_cols=23  Identities=22%  Similarity=0.185  Sum_probs=20.5

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|.
T Consensus       174 ~~~VLDl~cG~G~~sl~la~~~~  196 (315)
T PRK03522        174 PRSMWDLFCGVGGFGLHCATPGM  196 (315)
T ss_pred             CCEEEEccCCCCHHHHHHHhcCC
Confidence            35799999999999999999764

>PRK14966 unknown domain/N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase fusion protein; Provisional

Probab=94.99  E-value=0.01  Score=56.02  Aligned_cols=21  Identities=29%  Similarity=0.484  Sum_probs=18.5

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus       252 ~~rVLDLGcGSG~IaiaLA~~  272 (423)
T PRK14966        252 NGRVWDLGTGSGAVAVTVALE  272 (423)
T ss_pred             CCEEEEEeChhhHHHHHHHHh
Confidence            347999999999999999875

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=94.97  E-value=0.021  Score=50.32  Aligned_cols=25  Identities=36%  Similarity=0.393  Sum_probs=19.0

Q ss_pred             CCCceeEeeccChHhHHHHHHC-CCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ-GYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~-GFs  188 (193)
                      +..+|||||||-|.++..+++. |-+
T Consensus        62 ~G~~vLDiGcGwG~~~~~~a~~~g~~   87 (273)
T PF02353_consen   62 PGDRVLDIGCGWGGLAIYAAERYGCH   87 (273)
T ss_dssp             TT-EEEEES-TTSHHHHHHHHHH--E
T ss_pred             CCCEEEEeCCCccHHHHHHHHHcCcE
Confidence            4678999999999999999998 653

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>TIGR00438 rrmJ cell division protein FtsJ

Probab=94.80  E-value=0.021  Score=46.29  Aligned_cols=23  Identities=30%  Similarity=0.254  Sum_probs=19.8

Q ss_pred             CCCceeEeeccChHhHHHHHHCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~G  186 (193)
                      +..+|||||||+|.+...+++..
T Consensus        32 ~g~~VLDiG~GtG~~~~~l~~~~   54 (188)
T TIGR00438        32 PGDTVLDLGAAPGGWSQVAVEQV   54 (188)
T ss_pred             CCCEEEEecCCCCHHHHHHHHHh
Confidence            45689999999999999888764

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=94.80  E-value=0.02  Score=49.41  Aligned_cols=21  Identities=38%  Similarity=0.379  Sum_probs=18.9

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.+...|++.
T Consensus        74 ~~~VLDlGcGtG~~~~~la~~   94 (261)
T PLN02233         74 GDRVLDLCCGSGDLAFLLSEK   94 (261)
T ss_pred             CCEEEEECCcCCHHHHHHHHH
Confidence            568999999999999999876

>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed

Probab=94.76  E-value=0.022  Score=46.23  Aligned_cols=22  Identities=36%  Similarity=0.389  Sum_probs=19.7

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.++..|++.+
T Consensus        52 ~~~vldiG~G~G~~~~~l~~~~   73 (239)
T PRK00216         52 GDKVLDLACGTGDLAIALAKAV   73 (239)
T ss_pred             CCeEEEeCCCCCHHHHHHHHHc
Confidence            4689999999999999998876

>PRK00274 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Reviewed

Probab=94.74  E-value=0.022  Score=49.50  Aligned_cols=23  Identities=35%  Similarity=0.475  Sum_probs=20.6

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||.|.+...|++.|-
T Consensus        43 ~~~VLEiG~G~G~lt~~L~~~~~   65 (272)
T PRK00274         43 GDNVLEIGPGLGALTEPLLERAA   65 (272)
T ss_pred             cCeEEEeCCCccHHHHHHHHhCC
Confidence            45899999999999999999864

>TIGR01983 UbiG ubiquinone biosynthesis O-methyltransferase

Probab=94.70  E-value=0.028  Score=45.90  Aligned_cols=25  Identities=40%  Similarity=0.664  Sum_probs=21.5

Q ss_pred             CCCceeEeeccChHhHHHHHHCCCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ...+|||||||.|.+...|++.|..
T Consensus        45 ~~~~vLdlG~G~G~~~~~l~~~~~~   69 (224)
T TIGR01983        45 FGLRVLDVGCGGGLLSEPLARLGAN   69 (224)
T ss_pred             CCCeEEEECCCCCHHHHHHHhcCCe
Confidence            3568999999999999999988754

This model represents an O-methyltransferase believed to act at two points in the ubiquinone biosynthetic pathway in bacteria (UbiG) and fungi (COQ3). A separate methylase (MenG/UbiE) catalyzes the single C-methylation step. The most commonly used names for genes in this family do not indicate whether this gene is an O-methyl, or C-methyl transferase.

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=94.68  E-value=0.022  Score=47.25  Aligned_cols=23  Identities=35%  Similarity=0.485  Sum_probs=20.0

Q ss_pred             CCCceeEeeccChHhHHHHHHCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~G  186 (193)
                      +..+|||||||+|.+...|++..
T Consensus        77 ~~~~VLDiG~GsG~~a~~la~~~   99 (215)
T TIGR00080        77 PGMKVLEIGTGSGYQAAVLAEIV   99 (215)
T ss_pred             CcCEEEEECCCccHHHHHHHHHh
Confidence            35689999999999999999863

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional

Probab=94.63  E-value=0.025  Score=47.49  Aligned_cols=22  Identities=27%  Similarity=0.243  Sum_probs=19.5

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.+.+.|++..
T Consensus        52 ~~~VLDlG~GtG~~t~~l~~~~   73 (209)
T PRK11188         52 GMTVVDLGAAPGGWSQYAVTQI   73 (209)
T ss_pred             CCEEEEEcccCCHHHHHHHHHc
Confidence            5689999999999999998863

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=94.61  E-value=0.026  Score=46.80  Aligned_cols=21  Identities=24%  Similarity=0.498  Sum_probs=18.4

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.+...|++.
T Consensus        73 ~~~VLDiG~GsG~~~~~la~~   93 (205)
T PRK13944         73 GMKILEVGTGSGYQAAVCAEA   93 (205)
T ss_pred             CCEEEEECcCccHHHHHHHHh
Confidence            468999999999999888874

>TIGR00478 tly hemolysin TlyA family protein

Probab=94.53  E-value=0.027  Score=48.76  Aligned_cols=24  Identities=25%  Similarity=0.346  Sum_probs=21.2

Q ss_pred             CCCceeEeeccChHhHHHHHHCCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      +...|||||||+|.|...|++.|-
T Consensus        75 ~~~~vlDiG~gtG~~t~~l~~~ga   98 (228)
T TIGR00478        75 KNKIVLDVGSSTGGFTDCALQKGA   98 (228)
T ss_pred             CCCEEEEcccCCCHHHHHHHHcCC
Confidence            356799999999999999999874

Hemolysins are exotoxins that attack blood cell membranes and cause cell rupture, often by forming a pore in the membrane. At least two members of this protein family have been characterized indirectly as pore-forming hemolysins, one from the spirochete Serpula (Treponema) hyodysenteriae and one from Mycobacterium tuberculosis. However, homology domains in this protein suggest methyltransferase activity (pfam01728) and RNA-binding activity (pfam01479).

>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]

Probab=94.45  E-value=0.028  Score=48.54  Aligned_cols=23  Identities=35%  Similarity=0.547  Sum_probs=20.0

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ...|||||||||.|.+..+-.|=
T Consensus        46 g~~V~DlG~GTG~La~ga~~lGa   68 (198)
T COG2263          46 GKTVLDLGAGTGILAIGAALLGA   68 (198)
T ss_pred             CCEEEEcCCCcCHHHHHHHhcCC
Confidence            45799999999999999988773

>PF13679 Methyltransf_32: Methyltransferase domain

Probab=94.44  E-value=0.051  Score=42.64  Aligned_cols=21  Identities=33%  Similarity=0.691  Sum_probs=19.0

Q ss_pred             CCCceeEeeccChHhHHHHHH
Q 029423          164 SSWSVLDIGTGNGLLLQELSK  184 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak  184 (193)
                      ....|+|+|||.|+|++.|+.
T Consensus        25 ~~~~vvD~GsG~GyLs~~La~   45 (141)
T PF13679_consen   25 RCITVVDLGSGKGYLSRALAH   45 (141)
T ss_pred             CCCEEEEeCCChhHHHHHHHH
Confidence            356899999999999999998

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=94.42  E-value=0.031  Score=46.63  Aligned_cols=21  Identities=33%  Similarity=0.442  Sum_probs=18.6

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||.|.++..|++.
T Consensus        46 g~~VLDiGcGtG~~al~la~~   66 (187)
T PRK00107         46 GERVLDVGSGAGFPGIPLAIA   66 (187)
T ss_pred             CCeEEEEcCCCCHHHHHHHHH
Confidence            468999999999999999864

>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases

Probab=94.41  E-value=0.03  Score=44.90  Aligned_cols=23  Identities=39%  Similarity=0.481  Sum_probs=20.7

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||+|||+|.++..|++.+.
T Consensus        40 ~~~vldiG~G~G~~~~~~~~~~~   62 (223)
T TIGR01934        40 GQKVLDVACGTGDLAIELAKSAP   62 (223)
T ss_pred             CCeEEEeCCCCChhHHHHHHhcC
Confidence            56899999999999999998865

Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases.

>PRK07402 precorrin-6B methylase; Provisional

Probab=94.39  E-value=0.032  Score=45.50  Aligned_cols=21  Identities=29%  Similarity=0.377  Sum_probs=18.7

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||.|.+...|++.
T Consensus        41 ~~~VLDiG~G~G~~~~~la~~   61 (196)
T PRK07402         41 DSVLWDIGAGTGTIPVEAGLL   61 (196)
T ss_pred             CCEEEEeCCCCCHHHHHHHHH
Confidence            468999999999999999865

>PRK09489 rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provisional

Probab=94.35  E-value=0.025  Score=51.33  Aligned_cols=21  Identities=38%  Similarity=0.656  Sum_probs=19.0

Q ss_pred             CceeEeeccChHhHHHHHHCC
Q 029423          166 WSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~G  186 (193)
                      .+|||||||+|.++..|++.+
T Consensus       198 g~VLDlGCG~G~ls~~la~~~  218 (342)
T PRK09489        198 GKVLDVGCGAGVLSAVLARHS  218 (342)
T ss_pred             CeEEEeccCcCHHHHHHHHhC
Confidence            479999999999999999874

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=94.20  E-value=0.036  Score=45.46  Aligned_cols=22  Identities=36%  Similarity=0.415  Sum_probs=19.1

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||+|||+|.++.++++.
T Consensus        40 ~~~~vlDlG~GtG~~s~~~a~~   61 (198)
T PRK00377         40 KGDMILDIGCGTGSVTVEASLL   61 (198)
T ss_pred             CcCEEEEeCCcCCHHHHHHHHH
Confidence            4568999999999999998764

>PLN02336 phosphoethanolamine N-methyltransferase

Probab=94.09  E-value=0.036  Score=51.11  Aligned_cols=23  Identities=39%  Similarity=0.537  Sum_probs=20.2

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.+.
T Consensus        38 ~~~vLDlGcG~G~~~~~la~~~~   60 (475)
T PLN02336         38 GKSVLELGAGIGRFTGELAKKAG   60 (475)
T ss_pred             CCEEEEeCCCcCHHHHHHHhhCC
Confidence            45899999999999999998754

>PRK14121 tRNA (guanine-N(7)-)-methyltransferase; Provisional

Probab=94.02  E-value=0.037  Score=51.82  Aligned_cols=21  Identities=29%  Similarity=0.378  Sum_probs=19.4

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ...|||||||+|.++..|++.
T Consensus       123 ~p~vLEIGcGsG~~ll~lA~~  143 (390)
T PRK14121        123 EKILIEIGFGSGRHLLYQAKN  143 (390)
T ss_pred             CCeEEEEcCcccHHHHHHHHh
Confidence            458999999999999999987

>PRK13168 rumA 23S rRNA m(5)U1939 methyltransferase; Reviewed

Probab=94.02  E-value=0.067  Score=49.56  Aligned_cols=23  Identities=30%  Similarity=0.274  Sum_probs=20.3

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.+-
T Consensus       298 ~~~VLDlgcGtG~~sl~la~~~~  320 (443)
T PRK13168        298 GDRVLDLFCGLGNFTLPLARQAA  320 (443)
T ss_pred             CCEEEEEeccCCHHHHHHHHhCC
Confidence            45899999999999999998763

>TIGR00095 RNA methyltransferase, RsmD family

Probab=93.82  E-value=0.049  Score=45.20  Aligned_cols=24  Identities=33%  Similarity=0.437  Sum_probs=21.6

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+||||+||+|.|+++++..|-.
T Consensus        50 g~~vLDLfaGsG~lglea~srga~   73 (189)
T TIGR00095        50 GAHLLDVFAGSGLLGEEALSRGAK   73 (189)
T ss_pred             CCEEEEecCCCcHHHHHHHhCCCC
Confidence            468999999999999999999863

This model represents a family of uncharacterized bacterial proteins. Members are present in nearly every complete bacterial genome, always in a single copy. PSI-BLAST analysis shows homology to several families of SAM-dependent methyltransferases, including ribosomal RNA adenine dimethylases.

>PRK04266 fibrillarin; Provisional

Probab=93.69  E-value=0.05  Score=46.66  Aligned_cols=22  Identities=23%  Similarity=0.339  Sum_probs=19.6

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||+|||+|.++..|++.
T Consensus        72 ~g~~VlD~G~G~G~~~~~la~~   93 (226)
T PRK04266         72 KGSKVLYLGAASGTTVSHVSDI   93 (226)
T ss_pred             CCCEEEEEccCCCHHHHHHHHh
Confidence            3568999999999999999985

>PRK10909 rsmD 16S rRNA m(2)G966-methyltransferase; Provisional

Probab=93.60  E-value=0.088  Score=44.48  Aligned_cols=23  Identities=26%  Similarity=0.094  Sum_probs=18.8

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.+++++...|.
T Consensus        54 ~~~vLDl~~GsG~l~l~~lsr~a   76 (199)
T PRK10909         54 DARCLDCFAGSGALGLEALSRYA   76 (199)
T ss_pred             CCEEEEcCCCccHHHHHHHHcCC
Confidence            45899999999999997655554

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=93.52  E-value=0.051  Score=49.96  Aligned_cols=24  Identities=38%  Similarity=0.507  Sum_probs=20.4

Q ss_pred             CCCceeEeeccChHhHHHHHHC-CC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ-GY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~-GF  187 (193)
                      +..+|||||||+|.++..|++. |.
T Consensus       167 ~g~rVLDIGcG~G~~a~~la~~~g~  191 (383)
T PRK11705        167 PGMRVLDIGCGWGGLARYAAEHYGV  191 (383)
T ss_pred             CCCEEEEeCCCccHHHHHHHHHCCC
Confidence            3568999999999999999985 54

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=93.37  E-value=0.059  Score=46.58  Aligned_cols=22  Identities=32%  Similarity=0.413  Sum_probs=18.8

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||+|.+...|++.
T Consensus        52 ~~~~VLDiGcG~G~~a~~la~~   73 (263)
T PTZ00098         52 ENSKVLDIGSGLGGGCKYINEK   73 (263)
T ss_pred             CCCEEEEEcCCCChhhHHHHhh
Confidence            3568999999999999998764

>PRK11727 23S rRNA mA1618 methyltransferase; Provisional

Probab=93.36  E-value=0.1  Score=47.52  Aligned_cols=22  Identities=27%  Similarity=0.450  Sum_probs=16.7

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      ...+|||||||.|.+..-|+..
T Consensus       114 ~~~~vLDIGtGag~I~~lLa~~  135 (321)
T PRK11727        114 ANVRVLDIGVGANCIYPLIGVH  135 (321)
T ss_pred             CCceEEEecCCccHHHHHHHhh
Confidence            3578999999988766666554

>TIGR02716 C20_methyl_CrtF C-20 methyltransferase BchU

Probab=93.36  E-value=0.054  Score=47.17  Aligned_cols=22  Identities=23%  Similarity=0.306  Sum_probs=19.8

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.++..+++..
T Consensus       150 ~~~vlDiG~G~G~~~~~~~~~~  171 (306)
T TIGR02716       150 VKKMIDVGGGIGDISAAMLKHF  171 (306)
T ss_pred             CCEEEEeCCchhHHHHHHHHHC
Confidence            4589999999999999999884

Members of this protein family are the S-adenosylmethionine-depenedent C-20 methyltransferase BchU, part of the pathway of bacteriochlorophyll c production in photosynthetic green sulfur bacteria. The position modified by this enzyme represents the difference between bacteriochlorophylls c and d; strains lacking this protein can only produced bacteriochlorophyll d.

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=93.35  E-value=0.061  Score=44.27  Aligned_cols=23  Identities=35%  Similarity=0.416  Sum_probs=19.3

Q ss_pred             CCCceeEeeccChHhHHHHHHCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~G  186 (193)
                      +..+|||||||+|.+...|++.+
T Consensus        78 ~~~~VLeiG~GsG~~t~~la~~~  100 (212)
T PRK00312         78 PGDRVLEIGTGSGYQAAVLAHLV  100 (212)
T ss_pred             CCCEEEEECCCccHHHHHHHHHh
Confidence            35689999999999988888764

>COG4976 Predicted methyltransferase (contains TPR repeat) [General function prediction only]

Probab=93.34  E-value=0.035  Score=49.96  Aligned_cols=20  Identities=35%  Similarity=0.574  Sum_probs=17.8

Q ss_pred             CceeEeeccChHhHHHHHHC
Q 029423          166 WSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~  185 (193)
                      .++||||||+|+++.+|+..
T Consensus       127 ~~~lDLGCGTGL~G~~lR~~  146 (287)
T COG4976         127 RRMLDLGCGTGLTGEALRDM  146 (287)
T ss_pred             ceeeecccCcCcccHhHHHH
Confidence            47999999999999999864

>PLN02336 phosphoethanolamine N-methyltransferase

Probab=93.13  E-value=0.068  Score=49.25  Aligned_cols=22  Identities=27%  Similarity=0.268  Sum_probs=19.2

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||+|.++..|++.
T Consensus       266 ~~~~vLDiGcG~G~~~~~la~~  287 (475)
T PLN02336        266 PGQKVLDVGCGIGGGDFYMAEN  287 (475)
T ss_pred             CCCEEEEEeccCCHHHHHHHHh
Confidence            3568999999999999999875

>TIGR02085 meth_trns_rumB 23S rRNA (uracil-5-)-methyltransferase RumB

Probab=92.96  E-value=0.14  Score=46.63  Aligned_cols=22  Identities=14%  Similarity=-0.014  Sum_probs=19.6

Q ss_pred             CceeEeeccChHhHHHHHHCCC
Q 029423          166 WSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~GF  187 (193)
                      .+|||||||+|.+...|+..|-
T Consensus       235 ~~vLDL~cG~G~~~l~la~~~~  256 (374)
T TIGR02085       235 TQMWDLFCGVGGFGLHCAGPDT  256 (374)
T ss_pred             CEEEEccCCccHHHHHHhhcCC
Confidence            4799999999999999998764

This family consists of RNA methyltransferases designated RumB, formerly YbjF. Members act on 23S rRNA U747 and the equivalent position in other proteobacterial species. This family is homologous to the other 23S rRNA methyltransferase RumA and to the tRNA methyltransferase TrmA.

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=92.91  E-value=0.08  Score=45.08  Aligned_cols=22  Identities=27%  Similarity=0.453  Sum_probs=18.3

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||.|.+.+.+++.
T Consensus        77 ~g~~VLDiG~G~G~~~~~~a~~   98 (272)
T PRK11873         77 PGETVLDLGSGGGFDCFLAARR   98 (272)
T ss_pred             CCCEEEEeCCCCCHHHHHHHHH
Confidence            3568999999999988877764

>TIGR03704 PrmC_rel_meth putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific

Probab=92.72  E-value=0.076  Score=45.86  Aligned_cols=20  Identities=25%  Similarity=0.386  Sum_probs=18.1

Q ss_pred             CceeEeeccChHhHHHHHHC
Q 029423          166 WSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~  185 (193)
                      .+|||||||+|.++..|++.
T Consensus        88 ~~vLDlg~GsG~i~l~la~~  107 (251)
T TIGR03704        88 LVVVDLCCGSGAVGAALAAA  107 (251)
T ss_pred             CEEEEecCchHHHHHHHHHh
Confidence            47999999999999999875

This protein family is closely related to two different families of protein-(glutamine-N5) methyltransferase. The first is PrmB, which modifies ribosomal protein L3 in some bacteria. The second is PrmC (HemK), which modifies peptide chain release factors 1 and 2 in most bacteria and also in eukaryotes. The glutamine side chain-binding motif NPPY shared by PrmB and PrmC is N[VAT]PY in this family. The protein substrate is unknown.

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=92.63  E-value=0.078  Score=47.85  Aligned_cols=23  Identities=30%  Similarity=0.378  Sum_probs=20.6

Q ss_pred             CCCCceeEeeccChHhHHHHHHC
Q 029423          163 LSSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       163 ~~~~sILDLGCGNG~LL~eLak~  185 (193)
                      .+..+|||||||=|.|+.-++++
T Consensus        71 ~~G~~lLDiGCGWG~l~~~aA~~   93 (283)
T COG2230          71 KPGMTLLDIGCGWGGLAIYAAEE   93 (283)
T ss_pred             CCCCEEEEeCCChhHHHHHHHHH
Confidence            34679999999999999999987

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=92.62  E-value=0.062  Score=46.20  Aligned_cols=22  Identities=32%  Similarity=0.534  Sum_probs=17.3

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||+|.+...|++.
T Consensus        47 ~g~~vLDv~~GtG~~~~~l~~~   68 (233)
T PF01209_consen   47 PGDRVLDVACGTGDVTRELARR   68 (233)
T ss_dssp             S--EEEEET-TTSHHHHHHGGG
T ss_pred             CCCEEEEeCCChHHHHHHHHHH
Confidence            3568999999999999999876

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>TIGR03438 probable methyltransferase

Probab=92.61  E-value=0.077  Score=46.73  Aligned_cols=21  Identities=14%  Similarity=0.319  Sum_probs=18.3

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.+...|.+.
T Consensus        64 ~~~iLELGcGtG~~t~~Ll~~   84 (301)
T TIGR03438        64 GCELVELGSGSSRKTRLLLDA   84 (301)
T ss_pred             CCeEEecCCCcchhHHHHHHh
Confidence            357999999999988888877

This model represents a distinct set of uncharacterized proteins found in the bacteria. Analysis by PSI-BLAST shows remote sequence homology to methyltransferases

>TIGR00536 hemK_fam HemK family putative methylases

Probab=92.54  E-value=0.073  Score=46.35  Aligned_cols=21  Identities=33%  Similarity=0.555  Sum_probs=19.0

Q ss_pred             CceeEeeccChHhHHHHHHCC
Q 029423          166 WSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~G  186 (193)
                      .+|||||||+|.++..|++..
T Consensus       116 ~~vLDlG~GsG~i~l~la~~~  136 (284)
T TIGR00536       116 LHILDLGTGSGCIALALAYEF  136 (284)
T ss_pred             CEEEEEeccHhHHHHHHHHHC
Confidence            479999999999999999864

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. Both E. coli and H. influenzae have two members rather than one. The members from the Mycoplasmas have an additional C-terminal domain.

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=92.51  E-value=0.097  Score=43.78  Aligned_cols=21  Identities=33%  Similarity=0.537  Sum_probs=18.8

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.+...|++.
T Consensus        77 g~~VLdIG~GsG~~t~~la~~   97 (212)
T PRK13942         77 GMKVLEIGTGSGYHAAVVAEI   97 (212)
T ss_pred             cCEEEEECCcccHHHHHHHHh
Confidence            568999999999999988876

>TIGR00479 rumA 23S rRNA (uracil-5-)-methyltransferase RumA

Probab=92.41  E-value=0.18  Score=46.28  Aligned_cols=23  Identities=30%  Similarity=0.235  Sum_probs=20.1

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||.|.++..|++.+.
T Consensus       293 ~~~vLDl~cG~G~~sl~la~~~~  315 (431)
T TIGR00479       293 EELVVDAYCGVGTFTLPLAKQAK  315 (431)
T ss_pred             CCEEEEcCCCcCHHHHHHHHhCC
Confidence            35799999999999999998753

This protein family was first proposed to be RNA methyltransferases by homology to the TrmA family. The member from E. coli has now been shown to act as the 23S RNA methyltransferase for the conserved U1939. The gene is now designated rumA and was previously designated ygcA.

>PTZ00338 dimethyladenosine transferase-like protein; Provisional

Probab=92.32  E-value=0.1  Score=46.60  Aligned_cols=22  Identities=36%  Similarity=0.564  Sum_probs=19.8

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      +.+|||||||.|.|...|++.+
T Consensus        37 ~~~VLEIG~G~G~LT~~Ll~~~   58 (294)
T PTZ00338         37 TDTVLEIGPGTGNLTEKLLQLA   58 (294)
T ss_pred             cCEEEEecCchHHHHHHHHHhC
Confidence            5689999999999999999875

>TIGR01177 conserved hypothetical protein TIGR01177

Probab=92.30  E-value=0.18  Score=44.75  Aligned_cols=23  Identities=35%  Similarity=0.238  Sum_probs=20.0

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||+|||+|.++.+++..|.
T Consensus       183 g~~vLDp~cGtG~~lieaa~~~~  205 (329)
T TIGR01177       183 GDRVLDPFCGTGGFLIEAGLMGA  205 (329)
T ss_pred             cCEEEECCCCCCHHHHHHHHhCC
Confidence            45899999999999999887764

This family is found exclusively in the Archaea.

>TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific

Probab=92.28  E-value=0.1  Score=45.78  Aligned_cols=22  Identities=23%  Similarity=0.226  Sum_probs=19.3

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||+|||+|.+...|++..
T Consensus       122 ~~~vLDlG~GsG~i~~~la~~~  143 (284)
T TIGR03533       122 VKRILDLCTGSGCIAIACAYAF  143 (284)
T ss_pred             CCEEEEEeCchhHHHHHHHHHC
Confidence            3579999999999999999863

Members of this protein family methylate ribosomal protein L3 on a glutamine side chain. This family is related to HemK, a protein-glutamine methyltranferase for peptide chain release factors.

>COG0220 Predicted S-adenosylmethionine-dependent methyltransferase [General function prediction only]

Probab=92.26  E-value=0.087  Score=45.71  Aligned_cols=20  Identities=45%  Similarity=0.610  Sum_probs=18.6

Q ss_pred             CceeEeeccChHhHHHHHHC
Q 029423          166 WSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~  185 (193)
                      .-+|+||||+|.++..||++
T Consensus        50 pi~lEIGfG~G~~l~~~A~~   69 (227)
T COG0220          50 PIVLEIGFGMGEFLVEMAKK   69 (227)
T ss_pred             cEEEEECCCCCHHHHHHHHH
Confidence            46999999999999999986

>KOG1541 consensus Predicted protein carboxyl methylase [General function prediction only]

Probab=91.98  E-value=0.055  Score=48.45  Aligned_cols=23  Identities=48%  Similarity=0.569  Sum_probs=20.7

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..-|||||||.|+-...|.+.|.
T Consensus        51 ~~~iLDIGCGsGLSg~vL~~~Gh   73 (270)
T KOG1541|consen   51 SGLILDIGCGSGLSGSVLSDSGH   73 (270)
T ss_pred             CcEEEEeccCCCcchheeccCCc
Confidence            45799999999999999999985

>PLN02490 MPBQ/MSBQ methyltransferase

Probab=91.88  E-value=0.13  Score=47.21  Aligned_cols=21  Identities=29%  Similarity=0.567  Sum_probs=18.4

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.+...|++.
T Consensus       114 ~~~VLDLGcGtG~~~l~La~~  134 (340)
T PLN02490        114 NLKVVDVGGGTGFTTLGIVKH  134 (340)
T ss_pred             CCEEEEEecCCcHHHHHHHHH
Confidence            468999999999999888874

>COG2890 HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis]

Probab=91.87  E-value=0.1  Score=46.14  Aligned_cols=20  Identities=45%  Similarity=0.878  Sum_probs=18.7

Q ss_pred             ceeEeeccChHhHHHHHHCC
Q 029423          167 SVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       167 sILDLGCGNG~LL~eLak~G  186 (193)
                      +|||||||+|.+...|++.+
T Consensus       113 ~ilDlGTGSG~iai~la~~~  132 (280)
T COG2890         113 RILDLGTGSGAIAIALAKEG  132 (280)
T ss_pred             cEEEecCChHHHHHHHHhhC
Confidence            79999999999999999875

>smart00138 MeTrc Methyltransferase, chemotaxis proteins

Probab=91.73  E-value=0.23  Score=43.22  Aligned_cols=21  Identities=19%  Similarity=0.243  Sum_probs=16.1

Q ss_pred             CCceeEeeccChH----hHHHHHHC
Q 029423          165 SWSVLDIGTGNGL----LLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~----LL~eLak~  185 (193)
                      ..+|||+|||+|.    |...|++.
T Consensus       100 ~~ri~d~GCgtGee~YslA~~l~e~  124 (264)
T smart00138      100 RVRIWSAGCSTGEEPYSLAMLLAET  124 (264)
T ss_pred             CEEEEeccccCChHHHHHHHHHHHH
Confidence            4789999999996    55556554

Methylates methyl-accepting chemotaxis proteins to form gamma-glutamyl methyl ester residues.

>PHA03412 putative methyltransferase; Provisional

Probab=91.70  E-value=0.092  Score=46.46  Aligned_cols=21  Identities=33%  Similarity=0.294  Sum_probs=18.6

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||+|||+|.|+..+++.
T Consensus        50 ~grVLDlG~GSG~Lalala~~   70 (241)
T PHA03412         50 SGSVVDLCAGIGGLSFAMVHM   70 (241)
T ss_pred             CCEEEEccChHHHHHHHHHHh
Confidence            458999999999999999874

>PRK06922 hypothetical protein; Provisional

Probab=91.66  E-value=0.12  Score=51.72  Aligned_cols=21  Identities=24%  Similarity=0.692  Sum_probs=18.7

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus       419 g~rVLDIGCGTG~ls~~LA~~  439 (677)
T PRK06922        419 GDTIVDVGAGGGVMLDMIEEE  439 (677)
T ss_pred             CCEEEEeCCCCCHHHHHHHHh
Confidence            468999999999999999875

>PRK11805 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=91.51  E-value=0.11  Score=46.24  Aligned_cols=20  Identities=25%  Similarity=0.351  Sum_probs=18.4

Q ss_pred             CceeEeeccChHhHHHHHHC
Q 029423          166 WSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~  185 (193)
                      .+|||||||+|.++..|++.
T Consensus       135 ~~VLDlG~GsG~iai~la~~  154 (307)
T PRK11805        135 TRILDLCTGSGCIAIACAYA  154 (307)
T ss_pred             CEEEEEechhhHHHHHHHHH
Confidence            47999999999999999986

>KOG1499 consensus Protein arginine N-methyltransferase PRMT1 and related enzymes [Posttranslational modification, protein turnover, chaperones; Transcription; Signal transduction mechanisms]

Probab=91.20  E-value=0.14  Score=47.47  Aligned_cols=27  Identities=33%  Similarity=0.500  Sum_probs=23.1

Q ss_pred             CCCCceeEeeccChHhHHHHHHCCCcc
Q 029423          163 LSSWSVLDIGTGNGLLLQELSKQGYTL  189 (193)
Q Consensus       163 ~~~~sILDLGCGNG~LL~eLak~GFs~  189 (193)
                      .+...|||||||.|.|+.--||.|...
T Consensus        59 f~dK~VlDVGcGtGILS~F~akAGA~~   85 (346)
T KOG1499|consen   59 FKDKTVLDVGCGTGILSMFAAKAGARK   85 (346)
T ss_pred             cCCCEEEEcCCCccHHHHHHHHhCcce
Confidence            445679999999999999999999643

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=90.90  E-value=0.17  Score=44.35  Aligned_cols=22  Identities=32%  Similarity=0.400  Sum_probs=19.9

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||+|-+...|++.
T Consensus        51 ~g~~vLDva~GTGd~a~~~~k~   72 (238)
T COG2226          51 PGDKVLDVACGTGDMALLLAKS   72 (238)
T ss_pred             CCCEEEEecCCccHHHHHHHHh
Confidence            3578999999999999999986

>PF05401 NodS: Nodulation protein S (NodS); InterPro: IPR008715 This entry consists of nodulation S (NodS) proteins

Probab=90.61  E-value=0.14  Score=44.35  Aligned_cols=20  Identities=25%  Similarity=0.518  Sum_probs=16.2

Q ss_pred             CceeEeeccChHhHHHHHHC
Q 029423          166 WSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~  185 (193)
                      .++|++|||||.|...|+..
T Consensus        45 ~~alEvGCs~G~lT~~LA~r   64 (201)
T PF05401_consen   45 RRALEVGCSIGVLTERLAPR   64 (201)
T ss_dssp             EEEEEE--TTSHHHHHHGGG
T ss_pred             ceeEecCCCccHHHHHHHHh
Confidence            46999999999999999876

The products of the rhizobial nodulation genes are involved in the biosynthesis of lipochitin oligosaccharides (LCOs), which are host-specific signal molecules required for nodule formation. NodS is an S-adenosyl-L-methionine (SAM)-dependent methyltransferase involved in N methylation of LCOs. NodS uses N-deacetylated chitooligosaccharides, the products of the NodBC proteins, as its methyl acceptors [].; GO: 0008757 S-adenosylmethionine-dependent methyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0009877 nodulation; PDB: 3OFK_D 3OFJ_A.

>PHA03411 putative methyltransferase; Provisional

Probab=90.43  E-value=0.19  Score=45.26  Aligned_cols=21  Identities=29%  Similarity=0.294  Sum_probs=18.3

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||+|||.|.++..+++.
T Consensus        65 ~grVLDLGcGsGilsl~la~r   85 (279)
T PHA03411         65 TGKVLDLCAGIGRLSFCMLHR   85 (279)
T ss_pred             CCeEEEcCCCCCHHHHHHHHh
Confidence            358999999999999988775

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=90.41  E-value=0.25  Score=42.35  Aligned_cols=28  Identities=29%  Similarity=0.340  Sum_probs=23.2

Q ss_pred             CCCCceeEeeccChHhHHHHHHCCCccc
Q 029423          163 LSSWSVLDIGTGNGLLLQELSKQGYTLR  190 (193)
Q Consensus       163 ~~~~sILDLGCGNG~LL~eLak~GFs~~  190 (193)
                      .+...++|||||.|++..+++..|-.++
T Consensus        33 ~~g~~l~DIGaGtGsi~iE~a~~~p~~~   60 (187)
T COG2242          33 RPGDRLWDIGAGTGSITIEWALAGPSGR   60 (187)
T ss_pred             CCCCEEEEeCCCccHHHHHHHHhCCCce
Confidence            3467899999999999999997776554

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=90.39  E-value=0.22  Score=45.20  Aligned_cols=21  Identities=33%  Similarity=0.515  Sum_probs=18.9

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.+...|++.
T Consensus        81 g~~VLDIG~GtG~~a~~LA~~  101 (322)
T PRK13943         81 GMRVLEIGGGTGYNAAVMSRV  101 (322)
T ss_pred             CCEEEEEeCCccHHHHHHHHh
Confidence            468999999999999999875

>PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed

Probab=90.26  E-value=0.2  Score=47.79  Aligned_cols=22  Identities=27%  Similarity=0.299  Sum_probs=19.7

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      ...-+||||||+|.++..||+.
T Consensus       347 ~~p~~lEIG~G~G~~~~~~A~~  368 (506)
T PRK01544        347 KRKVFLEIGFGMGEHFINQAKM  368 (506)
T ss_pred             CCceEEEECCCchHHHHHHHHh
Confidence            3567999999999999999986

>PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed

Probab=89.55  E-value=0.22  Score=47.54  Aligned_cols=21  Identities=29%  Similarity=0.515  Sum_probs=18.5

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus       139 ~~~VLDlG~GsG~iai~la~~  159 (506)
T PRK01544        139 FLNILELGTGSGCIAISLLCE  159 (506)
T ss_pred             CCEEEEccCchhHHHHHHHHH
Confidence            357999999999999999875

>PF10294 Methyltransf_16: Putative methyltransferase; InterPro: IPR019410 There are a number of unidentified genes that have a high probability of coding for methyltransferases

Probab=88.84  E-value=0.3  Score=39.75  Aligned_cols=23  Identities=30%  Similarity=0.424  Sum_probs=19.6

Q ss_pred             CCCCceeEeeccChHhHHHHHHC
Q 029423          163 LSSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       163 ~~~~sILDLGCGNG~LL~eLak~  185 (193)
                      ....+||+||||.|..+..+++.
T Consensus        44 ~~~~~VLELGaG~Gl~gi~~a~~   66 (173)
T PF10294_consen   44 FRGKRVLELGAGTGLPGIAAAKL   66 (173)
T ss_dssp             TTTSEEEETT-TTSHHHHHHHHT
T ss_pred             cCCceEEEECCccchhHHHHHhc
Confidence            34678999999999999999998

They make up approximately 0.6-1.6% of the genes in the yeast, human, mouse, Drosophila melanogaster, Caenorhabditis elegans, Arabidopsis thaliana, and Escherichia coli genomes []. This entry represents putative nicotinamide N-methyltransferases involved in rDNA silencing and in lifespan determination. ; PDB: 3BZB_A.

>PRK10901 16S rRNA methyltransferase B; Provisional

Probab=88.67  E-value=0.46  Score=43.94  Aligned_cols=23  Identities=17%  Similarity=0.091  Sum_probs=20.2

Q ss_pred             CCCceeEeeccChHhHHHHHHCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~G  186 (193)
                      +..+|||+|||.|.+...|++.+
T Consensus       244 ~g~~VLDlgaG~G~~t~~la~~~  266 (427)
T PRK10901        244 NGERVLDACAAPGGKTAHILELA  266 (427)
T ss_pred             CCCEEEEeCCCCChHHHHHHHHc
Confidence            35689999999999999999875

>PRK00811 spermidine synthase; Provisional

Probab=88.28  E-value=0.37  Score=42.33  Aligned_cols=21  Identities=43%  Similarity=0.520  Sum_probs=18.7

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+||+||||+|.++.++.+.
T Consensus        77 p~~VL~iG~G~G~~~~~~l~~   97 (283)
T PRK00811         77 PKRVLIIGGGDGGTLREVLKH   97 (283)
T ss_pred             CCEEEEEecCchHHHHHHHcC
Confidence            357999999999999999886

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=87.86  E-value=0.4  Score=40.88  Aligned_cols=22  Identities=36%  Similarity=0.471  Sum_probs=17.6

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||.|.+..-|++.
T Consensus        72 pg~~VLeIGtGsGY~aAlla~l   93 (209)
T PF01135_consen   72 PGDRVLEIGTGSGYQAALLAHL   93 (209)
T ss_dssp             TT-EEEEES-TTSHHHHHHHHH
T ss_pred             CCCEEEEecCCCcHHHHHHHHh
Confidence            4679999999999999988875

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK04457 spermidine synthase; Provisional

Probab=87.80  E-value=0.39  Score=41.77  Aligned_cols=20  Identities=30%  Similarity=0.428  Sum_probs=17.9

Q ss_pred             CceeEeeccChHhHHHHHHC
Q 029423          166 WSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~  185 (193)
                      .+||+||||+|.+...|++.
T Consensus        68 ~~vL~IG~G~G~l~~~l~~~   87 (262)
T PRK04457         68 QHILQIGLGGGSLAKFIYTY   87 (262)
T ss_pred             CEEEEECCCHhHHHHHHHHh
Confidence            47999999999999998875

>PLN02672 methionine S-methyltransferase

Probab=87.38  E-value=0.38  Score=50.43  Aligned_cols=22  Identities=23%  Similarity=0.456  Sum_probs=19.5

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.+...|++.+
T Consensus       119 ~~~VLDlG~GSG~Iai~La~~~  140 (1082)
T PLN02672        119 DKTVAELGCGNGWISIAIAEKW  140 (1082)
T ss_pred             CCEEEEEecchHHHHHHHHHHC
Confidence            3579999999999999999874

>TIGR02143 trmA_only tRNA (uracil-5-)-methyltransferase

Probab=87.33  E-value=0.41  Score=43.49  Aligned_cols=20  Identities=25%  Similarity=0.363  Sum_probs=18.1

Q ss_pred             ceeEeeccChHhHHHHHHCC
Q 029423          167 SVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       167 sILDLGCGNG~LL~eLak~G  186 (193)
                      +|||||||+|.+++.|++..
T Consensus       200 ~vlDl~~G~G~~sl~la~~~  219 (353)
T TIGR02143       200 DLLELYCGNGNFSLALAQNF  219 (353)
T ss_pred             cEEEEeccccHHHHHHHHhC
Confidence            69999999999999998763

This family consists exclusively of proteins believed to act as tRNA (uracil-5-)-methyltransferase. All members of far are proteobacterial. The seed alignment was taken directly from pfam05958 in Pfam 12.0, but higher cutoffs are used to select only functionally equivalent proteins. Homologous proteins excluded by the higher cutoff scores of this model include other uracil methyltransferases, such as RumA, active on rRNA.

>PTZ00146 fibrillarin; Provisional

Probab=87.22  E-value=0.47  Score=43.01  Aligned_cols=22  Identities=23%  Similarity=0.348  Sum_probs=19.6

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||+|.+...|++.
T Consensus       132 pG~~VLDLGaG~G~~t~~lAdi  153 (293)
T PTZ00146        132 PGSKVLYLGAASGTTVSHVSDL  153 (293)
T ss_pred             CCCEEEEeCCcCCHHHHHHHHH
Confidence            3568999999999999999986

>PF03291 Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 This is a family of viral mRNA capping enzymes

Probab=86.81  E-value=0.94  Score=41.25  Aligned_cols=47  Identities=28%  Similarity=0.360  Sum_probs=28.8

Q ss_pred             HHHHHHHHHhhhhhhccCcccccccccCCCccccccccCCCCceeEeeccChHhHHHHHHCC
Q 029423          125 MDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       125 ~d~vv~Wlk~~~~~i~q~~ip~~~d~~~~e~~e~~~k~~~~~sILDLGCGNG~LL~eLak~G  186 (193)
                      +...-+|+|+.++..   .++.    ++        ......+|||||||.|-=|..-.+.+
T Consensus        38 lR~fNNwvKs~LI~~---~~~~----~~--------~~~~~~~VLDl~CGkGGDL~Kw~~~~   84 (331)
T PF03291_consen   38 LRNFNNWVKSVLIQK---YAKK----VK--------QNRPGLTVLDLCCGKGGDLQKWQKAK   84 (331)
T ss_dssp             HHHHHHHHHHHHHHH---HCHC----CC--------CTTTT-EEEEET-TTTTTHHHHHHTT
T ss_pred             HHHHhHHHHHHHHHH---HHHh----hh--------ccCCCCeEEEecCCCchhHHHHHhcC
Confidence            567788998875332   2210    00        00246789999999999887776664

The enzyme catalyses the first two reactions in the mRNA cap formation pathway. It is a heterodimer consisting of a large and small subunit. This entry is the large subunit. ; GO: 0006370 mRNA capping; PDB: 3EPP_A 3BGV_C 2VDW_C 1RI5_A 1RI3_A 1RI1_A 1Z3C_A 1RI2_A 2HV9_A 1RI4_A.

>TIGR00417 speE spermidine synthase

Probab=85.92  E-value=0.66  Score=40.20  Aligned_cols=21  Identities=43%  Similarity=0.559  Sum_probs=18.6

Q ss_pred             CceeEeeccChHhHHHHHHCC
Q 029423          166 WSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~G  186 (193)
                      .+||+||||+|.++.+|.+.+
T Consensus        74 ~~VL~iG~G~G~~~~~ll~~~   94 (270)
T TIGR00417        74 KHVLVIGGGDGGVLREVLKHK   94 (270)
T ss_pred             CEEEEEcCCchHHHHHHHhCC
Confidence            389999999999999988764

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>KOG2798 consensus Putative trehalase [Carbohydrate transport and metabolism]

Probab=85.19  E-value=1.1  Score=41.94  Aligned_cols=28  Identities=25%  Similarity=0.364  Sum_probs=25.1

Q ss_pred             CCCCceeEeeccChHhHHHHHHCCCccc
Q 029423          163 LSSWSVLDIGTGNGLLLQELSKQGYTLR  190 (193)
Q Consensus       163 ~~~~sILDLGCGNG~LL~eLak~GFs~~  190 (193)
                      +++.+||-=|||-|.|+.+|+..||+-+
T Consensus       149 r~ki~iLvPGaGlGRLa~dla~~G~~~q  176 (369)
T KOG2798|consen  149 RTKIRILVPGAGLGRLAYDLACLGFKCQ  176 (369)
T ss_pred             ccCceEEecCCCchhHHHHHHHhccccc
Confidence            5678999999999999999999999643

>PF00891 Methyltransf_2: O-methyltransferase; InterPro: IPR001077 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=85.05  E-value=0.61  Score=39.00  Aligned_cols=20  Identities=30%  Similarity=0.587  Sum_probs=17.2

Q ss_pred             CceeEeeccChHhHHHHHHC
Q 029423          166 WSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~  185 (193)
                      .+|||||+|.|.++.+|++.
T Consensus       102 ~~vvDvGGG~G~~~~~l~~~  121 (241)
T PF00891_consen  102 KTVVDVGGGSGHFAIALARA  121 (241)
T ss_dssp             SEEEEET-TTSHHHHHHHHH
T ss_pred             cEEEeccCcchHHHHHHHHH
Confidence            47999999999999999875

The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This domain includes a range of O-methyltransferases some of which utilise S-adenosyl methionine as substrate []. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. In eukaryotes, DNA methylation has been implicated in the control of several cellular processes, including differentiation, gene regulation, and embryonic development. O-methyltransferases have a common catalytic domain structure, which might be universal among S-adenosyl-L-methionine (AdoMet)-dependent methyltransferases []. Comparative analysis of the predicted amino acid sequences of a number of plant O-methyltransferase cDNA clones show that they share some 32-71% sequence identity, and can be grouped according to the different compounds they utilise as substrates [].; GO: 0008171 O-methyltransferase activity; PDB: 1FPQ_A 1FP1_D 3P9K_B 3P9I_D 3P9C_A 3I53_A 3I5U_A 3I64_A 3I58_A 1ZG3_A ....

>COG0500 SmtA SAM-dependent methyltransferases [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=85.04  E-value=0.5  Score=31.37  Aligned_cols=17  Identities=59%  Similarity=0.886  Sum_probs=13.1

Q ss_pred             eeEeeccChHh--HHHHHH
Q 029423          168 VLDIGTGNGLL--LQELSK  184 (193)
Q Consensus       168 ILDLGCGNG~L--L~eLak  184 (193)
                      |||+|||.|..  +..+..
T Consensus        52 ~ld~~~g~g~~~~~~~~~~   70 (257)
T COG0500          52 VLDIGCGTGRLALLARLGG   70 (257)
T ss_pred             eEEecCCcCHHHHHHHhCC
Confidence            99999999994  454444

>PLN02366 spermidine synthase

Probab=84.74  E-value=0.74  Score=41.47  Aligned_cols=21  Identities=33%  Similarity=0.632  Sum_probs=19.0

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+||+||||.|.++.+|++.
T Consensus        92 pkrVLiIGgG~G~~~rellk~  112 (308)
T PLN02366         92 PKKVLVVGGGDGGVLREIARH  112 (308)
T ss_pred             CCeEEEEcCCccHHHHHHHhC
Confidence            357999999999999999986

>PF02384 N6_Mtase: N-6 DNA Methylase; InterPro: IPR003356 This domain is fpound in N-6 adenine-specific DNA methylase (2

Probab=83.85  E-value=1.5  Score=38.13  Aligned_cols=20  Identities=35%  Similarity=0.330  Sum_probs=16.9

Q ss_pred             CCceeEeeccChHhHHHHHH
Q 029423          165 SWSVLDIGTGNGLLLQELSK  184 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak  184 (193)
                      ..+|||-.||.|.||.++.+
T Consensus        47 ~~~VlDPacGsG~fL~~~~~   66 (311)
T PF02384_consen   47 GDSVLDPACGSGGFLVAAME   66 (311)
T ss_dssp             TEEEEETT-TTSHHHHHHHH
T ss_pred             cceeechhhhHHHHHHHHHH
Confidence            45799999999999999876

1.1.72 from EC) from Type I and Type IC restriction systems. These enzymes are responsible for the methylation of specific DNA sequences in order to prevent the host from digesting its own genome via its restriction enzymes. These methylases have the same sequence specificity as their corresponding restriction enzymes. The type I restriction and modification system is composed of three polypeptides R, M and S. The M and S subunits together form a methyltransferase that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit, the complex can also act as an endonuclease, binding to the same target sequence but cutting the DNA some distance from this site. Whether the DNA is cut or modified depends on the methylation state of the target sequence. When the target site is unmodified, the DNA is cut. When the target site is hemimethylated, the complex acts as a maintenance methyltransferase, modifying the DNA so that both strands become methylated.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2F8L_A 2Y7C_C 2Y7H_C 2AR0_B 3KHK_A 3LKD_A 2OKC_B.

>PRK05031 tRNA (uracil-5-)-methyltransferase; Validated

Probab=83.69  E-value=0.75  Score=41.87  Aligned_cols=20  Identities=25%  Similarity=0.416  Sum_probs=18.1

Q ss_pred             CceeEeeccChHhHHHHHHC
Q 029423          166 WSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~  185 (193)
                      .+||||+||+|.|++.|++.
T Consensus       208 ~~vLDl~~G~G~~sl~la~~  227 (362)
T PRK05031        208 GDLLELYCGNGNFTLALARN  227 (362)
T ss_pred             CeEEEEeccccHHHHHHHhh
Confidence            36999999999999999876

>PRK14902 16S rRNA methyltransferase B; Provisional

Probab=83.21  E-value=1.4  Score=40.81  Aligned_cols=21  Identities=19%  Similarity=0.144  Sum_probs=18.6

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||+|||+|.+...|++.
T Consensus       251 g~~VLDlgaG~G~~t~~la~~  271 (444)
T PRK14902        251 GDTVLDACAAPGGKTTHIAEL  271 (444)
T ss_pred             CCEEEEeCCCCCHHHHHHHHH
Confidence            457999999999999999875

>PF05148 Methyltransf_8: Hypothetical methyltransferase; InterPro: IPR007823 This family consists of uncharacterised eukaryotic proteins which are related to S-adenosyl-L-methionine-dependent methyltransferases

Probab=82.80  E-value=1.2  Score=39.26  Aligned_cols=23  Identities=22%  Similarity=0.369  Sum_probs=13.1

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      +..|-|+|||.+.|...+. .+++
T Consensus        73 ~~viaD~GCGdA~la~~~~-~~~~   95 (219)
T PF05148_consen   73 SLVIADFGCGDAKLAKAVP-NKHK   95 (219)
T ss_dssp             TS-EEEES-TT-HHHHH---S---
T ss_pred             CEEEEECCCchHHHHHhcc-cCce
Confidence            5789999999999997764 4543

; GO: 0008168 methyltransferase activity; PDB: 2ZFU_B.

>PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases

Probab=82.42  E-value=0.7  Score=44.97  Aligned_cols=21  Identities=24%  Similarity=0.333  Sum_probs=19.3

Q ss_pred             ceeEeeccChHhHHHHHHCCC
Q 029423          167 SVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       167 sILDLGCGNG~LL~eLak~GF  187 (193)
                      .+||+|||.|+|+..|.+.|-
T Consensus       120 ~~LDvGcG~aSF~a~l~~r~V  140 (506)
T PF03141_consen  120 TALDVGCGVASFGAYLLERNV  140 (506)
T ss_pred             EEEeccceeehhHHHHhhCCc
Confidence            489999999999999999875

; GO: 0008168 methyltransferase activity

>PF07942 N2227: N2227-like protein; InterPro: IPR012901 This family features sequences that are similar to a region of hypothetical yeast gene product N2227 (P53934 from SWISSPROT)

Probab=82.34  E-value=0.88  Score=40.76  Aligned_cols=28  Identities=39%  Similarity=0.520  Sum_probs=24.7

Q ss_pred             CCCCceeEeeccChHhHHHHHHCCCccc
Q 029423          163 LSSWSVLDIGTGNGLLLQELSKQGYTLR  190 (193)
Q Consensus       163 ~~~~sILDLGCGNG~LL~eLak~GFs~~  190 (193)
                      +.+.+||-=|||-|.|..+|++.||..+
T Consensus        55 ~~~~~VLVPGsGLGRLa~Eia~~G~~~~   82 (270)
T PF07942_consen   55 RSKIRVLVPGSGLGRLAWEIAKLGYAVQ   82 (270)
T ss_pred             CCccEEEEcCCCcchHHHHHhhccceEE
Confidence            4567999999999999999999999644

This is thought to be expressed during meiosis and may be involved in the defence response to stressful conditions [].

>PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional

Probab=82.15  E-value=1  Score=44.65  Aligned_cols=24  Identities=13%  Similarity=0.011  Sum_probs=21.1

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.+...+++.|-.
T Consensus       539 g~rVLDlf~gtG~~sl~aa~~Ga~  562 (702)
T PRK11783        539 GKDFLNLFAYTGTASVHAALGGAK  562 (702)
T ss_pred             CCeEEEcCCCCCHHHHHHHHCCCC
Confidence            458999999999999999998753

>PF08123 DOT1: Histone methylation protein DOT1 ; InterPro: IPR013110 The DOT1 domain regulates gene expression by methylating histone H3 []

Probab=81.32  E-value=2.1  Score=36.51  Aligned_cols=20  Identities=20%  Similarity=0.310  Sum_probs=15.4

Q ss_pred             CCceeEeeccChHhHHHHHH
Q 029423          165 SWSVLDIGTGNGLLLQELSK  184 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak  184 (193)
                      +..++|||||.|.+.++.+-
T Consensus        43 ~dvF~DlGSG~G~~v~~aal   62 (205)
T PF08123_consen   43 DDVFYDLGSGVGNVVFQAAL   62 (205)
T ss_dssp             T-EEEEES-TTSHHHHHHHH
T ss_pred             CCEEEECCCCCCHHHHHHHH
Confidence            56899999999999887763

H3 methylation by DOT1 has been shown to be required for the DNA damage checkpoint in yeast [].; GO: 0018024 histone-lysine N-methyltransferase activity; PDB: 4ER3_A 4ER6_A 4EQZ_A 1NW3_A 3UWP_A 4ER5_A 3QOX_A 3SX0_A 4ER7_A 3SR4_A ....

>KOG2899 consensus Predicted methyltransferase [General function prediction only]

Probab=81.21  E-value=1.1  Score=40.78  Aligned_cols=21  Identities=33%  Similarity=0.560  Sum_probs=19.3

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ...+|||||-||.|...+||.
T Consensus        59 ~~~~LDIGCNsG~lt~~iak~   79 (288)
T KOG2899|consen   59 PKQALDIGCNSGFLTLSIAKD   79 (288)
T ss_pred             cceeEeccCCcchhHHHHHHh
Confidence            467999999999999999986

>PRK03612 spermidine synthase; Provisional

Probab=81.19  E-value=1.3  Score=42.46  Aligned_cols=22  Identities=41%  Similarity=0.581  Sum_probs=19.2

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+||+||||+|.++.++.+.+
T Consensus       298 ~~rVL~IG~G~G~~~~~ll~~~  319 (521)
T PRK03612        298 PRRVLVLGGGDGLALREVLKYP  319 (521)
T ss_pred             CCeEEEEcCCccHHHHHHHhCC
Confidence            3579999999999999998863

>PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional

Probab=80.39  E-value=1.4  Score=41.02  Aligned_cols=23  Identities=17%  Similarity=0.011  Sum_probs=19.3

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..++..|.
T Consensus       221 g~rVLDlfsgtG~~~l~aa~~ga  243 (396)
T PRK15128        221 NKRVLNCFSYTGGFAVSALMGGC  243 (396)
T ss_pred             CCeEEEeccCCCHHHHHHHhCCC
Confidence            46899999999999988776664

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=80.33  E-value=1.4  Score=38.12  Aligned_cols=21  Identities=24%  Similarity=0.235  Sum_probs=18.5

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||+|||.|.....|++.
T Consensus        72 g~~VLDl~ag~G~kt~~la~~   92 (264)
T TIGR00446        72 PERVLDMAAAPGGKTTQISAL   92 (264)
T ss_pred             cCEEEEECCCchHHHHHHHHH
Confidence            468999999999999988874

>TIGR02987 met_A_Alw26 type II restriction m6 adenine DNA methyltransferase, Alw26I/Eco31I/Esp3I family

Probab=80.13  E-value=1.1  Score=42.34  Aligned_cols=21  Identities=29%  Similarity=0.455  Sum_probs=18.6

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||.+||.|.|+..+++.
T Consensus        32 ~~~ilDP~cGsG~fl~~~~~~   52 (524)
T TIGR02987        32 KTKIIDPCCGDGRLIAALLKK   52 (524)
T ss_pred             ceEEEeCCCCccHHHHHHHHH
Confidence            468999999999999999864

Members of this family are the m6-adenine DNA methyltransferase protein, or domain of a fusion protein that also carries m5 cytosine methyltransferase activity, of type II restriction systems of the Alw26I/Eco31I/Esp3I family. A methyltransferase of this family is alway accompanied by a type II restriction endonuclease from the Alw26I/Eco31I/Esp3I family (TIGR02986) and by an adenine-specific modification methyltransferase. Members of this family are unusual in that regions of similarity to homologs outside this family are circularly permuted.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	193
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	4e-06

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens} Length = 215

 Score = 44.6 bits (105), Expect = 4e-06
 Identities = 19/100 (19%), Positives = 25/100 (25%), Gaps = 34/100 (34%)

Query: 89  ASMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHV 148
            S      YWD  Y            A   WFG                        +  
Sbjct: 1   GSGYREVEYWDQRYQ------GAADSAPYDWFGDF----------------------SSF 32

Query: 149 EDLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGYT 188
             L    +   D+      +L +G GN  L  EL   G+ 
Sbjct: 33  RALLEPELRPEDR------ILVLGCGNSALSYELFLGGFP 66

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	193
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	98.97
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	98.9
3ggd_A	245	SAM-dependent methyltransferase; YP_325210.1, stru	98.06
3lcc_A	235	Putative methyl chloride transferase; halide methy	98.01
2a14_A	263	Indolethylamine N-methyltransferase; SGC,INMT, str	97.94
1wzn_A	252	SAM-dependent methyltransferase; structural genomi	97.84
3l8d_A	242	Methyltransferase; structural genomics, PSI, nysgr	97.8
2xvm_A	199	Tellurite resistance protein TEHB; antibiotic resi	97.73
3gdh_A	241	Trimethylguanosine synthase homolog; M7G, CAP, dim	97.66
2i62_A	265	Nicotinamide N-methyltransferase; structural genom	97.65
3thr_A	293	Glycine N-methyltransferase; GNMT, folate, methylt	97.59
2p7i_A	250	Hypothetical protein; putative methyltransferase,	97.58
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	97.54
3ofk_A	216	Nodulation protein S; NODS, N-methyltransferase, S	97.51
3e8s_A	227	Putative SAM dependent methyltransferase; NP_74470	97.47
3cgg_A	195	SAM-dependent methyltransferase; NP_600671.1, meth	97.45
2ex4_A	241	Adrenal gland protein AD-003; methyltransferase, s	97.44
1xtp_A	254	LMAJ004091AAA; SGPP, structural genomics, PSI, pro	97.44
1ne2_A	200	Hypothetical protein TA1320; structural genomics,	97.31
4hg2_A	257	Methyltransferase type 11; structural genomics, PS	97.3
3bxo_A	239	N,N-dimethyltransferase; desosamine, sugar, carboh	97.29
3pfg_A	263	N-methyltransferase; N,N-dimethyltransferase, SAM	97.28
3h2b_A	203	SAM-dependent methyltransferase; alpha-beta protei	97.27
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	97.25
1ri5_A	298	MRNA capping enzyme; methyltransferase, M7G, messe	97.21
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	97.19
3e23_A	211	Uncharacterized protein RPA2492; alpha-beta protei	97.1
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	97.04
3ccf_A	279	Cyclopropane-fatty-acyl-phospholipid synthase; YP_	97.04
1ws6_A	171	Methyltransferase; structural genomics, riken stru	96.98
1vlm_A	219	SAM-dependent methyltransferase; possible histamin	96.97
3dlc_A	219	Putative S-adenosyl-L-methionine-dependent methylt	96.95
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	96.88
3hnr_A	220	Probable methyltransferase BT9727_4108; structural	96.88
2avn_A	260	Ubiquinone/menaquinone biosynthesis methyltransfe	96.81
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.8
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.76
3g5l_A	253	Putative S-adenosylmethionine dependent methyltran	96.75
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	96.74
2esr_A	177	Methyltransferase; structural genomics, hypothetic	96.74
2yxd_A	183	Probable cobalt-precorrin-6Y C(15)-methyltransfer	96.74
1ve3_A	227	Hypothetical protein PH0226; dimer, riken structur	96.73
2vdv_E	246	TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl	96.71
2zfu_A	215	Nucleomethylin, cerebral protein 1; nucleolar prot	96.69
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	96.67
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	96.66
1wy7_A	207	Hypothetical protein PH1948; seven-stranded beta s	96.66
3m70_A	286	Tellurite resistance protein TEHB homolog; structu	96.65
3g2m_A	299	PCZA361.24; SAM-dependent methyltransferase, glyco	96.64
3opn_A	232	Putative hemolysin; structural genomics, PSI-2, pr	96.62
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	96.61
3p9n_A	189	Possible methyltransferase (methylase); RV2966C, a	96.61
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.59
3g5t_A	299	Trans-aconitate 3-methyltransferase; structural ge	96.57
1y8c_A	246	S-adenosylmethionine-dependent methyltransferase;	96.54
2fhp_A	187	Methylase, putative; alpha-beta-alpha sandwich, st	96.53
2fca_A	213	TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bac	96.53
3ege_A	261	Putative methyltransferase from antibiotic biosyn	96.5
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	96.5
3ckk_A	235	TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-	96.47
4htf_A	285	S-adenosylmethionine-dependent methyltransferase;	96.46
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	96.46
1zx0_A	236	Guanidinoacetate N-methyltransferase; structural g	96.45
1nt2_A	210	Fibrillarin-like PRE-rRNA processing protein; adeM	96.45
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.44
2yqz_A	263	Hypothetical protein TTHA0223; RNA methyltransfera	96.44
3f4k_A	257	Putative methyltransferase; structural genomics, P	96.43
3dxy_A	218	TRNA (guanine-N(7)-)-methyltransferase; rossmann f	96.43
3bzb_A	281	Uncharacterized protein; RED ALGA, protein structu	96.43
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.42
2b3t_A	276	Protein methyltransferase HEMK; translation termin	96.42
3d2l_A	243	SAM-dependent methyltransferase; ZP_00538691.1, st	96.38
2ift_A	201	Putative methylase HI0767; NESG, Y767_haein, struc	96.35
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	96.35
3cc8_A	230	Putative methyltransferase; structural genomics, j	96.34
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	96.34
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.33
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.32
3bgv_A	313	MRNA CAP guanine-N7 methyltransferase; alternative	96.31
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	96.28
1yzh_A	214	TRNA (guanine-N(7)-)-methyltransferase; alpha-beta	96.28
3dh0_A	219	SAM dependent methyltransferase; cystal structure,	96.27
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	96.26
2aot_A	292	HMT, histamine N-methyltransferase; classic methyl	96.26
3dtn_A	234	Putative methyltransferase MM_2633; structural gen	96.25
3r0q_C	376	Probable protein arginine N-methyltransferase 4.2;	96.19
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	96.19
2fpo_A	202	Methylase YHHF; structural genomics, putative meth	96.18
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.17
3bkx_A	275	SAM-dependent methyltransferase; YP_807781.1, cycl	96.16
2gs9_A	211	Hypothetical protein TT1324; methyl transferase, s	96.15
1nv8_A	284	HEMK protein; class I adoMet-dependent methyltrans	96.14
3q7e_A	349	Protein arginine N-methyltransferase 1; HET: SAH;	96.14
2fyt_A	340	Protein arginine N-methyltransferase 3; structural	96.1
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	96.06
1o9g_A	250	RRNA methyltransferase; antibiotic resistance, Se-	96.04
4e2x_A	416	TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s	96.04
3lpm_A	259	Putative methyltransferase; structural genomics, p	96.03
2vdw_A	302	Vaccinia virus capping enzyme D1 subunit; nucleoti	96.02
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	95.95
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	95.93
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	95.92
2y1w_A	348	Histone-arginine methyltransferase CARM1; histone	95.91
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	95.89
1g6q_1	328	HnRNP arginine N-methyltransferase; SAM-binding do	95.88
1jsx_A	207	Glucose-inhibited division protein B; methyltransf	95.87
3mgg_A	276	Methyltransferase; NYSGXRC, PSI-II, protein struct	95.78
2ipx_A	233	RRNA 2'-O-methyltransferase fibrillarin; FBL, stru	95.75
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	95.72
2pjd_A	343	Ribosomal RNA small subunit methyltransferase C; g	95.71
2f8l_A	344	Hypothetical protein LMO1582; structural genomics,	95.7
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	95.68
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	95.66
3dmg_A	381	Probable ribosomal RNA small subunit methyltransf;	95.66
2h1r_A	299	Dimethyladenosine transferase, putative; SGC toron	95.65
1xdz_A	240	Methyltransferase GIDB; MCSG, protein structure in	95.65
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	95.64
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	95.58
4hc4_A	376	Protein arginine N-methyltransferase 6; HRMT1L6, S	95.56
3ftd_A	249	Dimethyladenosine transferase; KSGA, rossmann-like	95.55
2r6z_A	258	UPF0341 protein in RSP 3' region; alpha-beta prote	95.48
3fut_A	271	Dimethyladenosine transferase; methyltransferase,	95.48
2ozv_A	260	Hypothetical protein ATU0636; structural genomics,	95.44
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	95.41
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	95.38
2h00_A	254	Methyltransferase 10 domain containing protein; st	95.35
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	95.33
3hp7_A	291	Hemolysin, putative; structural genomics, APC64019	95.32
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	95.27
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	95.27
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	95.25
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	95.24
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	95.24
2ih2_A	421	Modification methylase TAQI; DNA, DNA methyltransf	95.2
2frn_A	278	Hypothetical protein PH0793; structural genomics,	95.19
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	95.18
3uzu_A	279	Ribosomal RNA small subunit methyltransferase A; s	95.17
4dcm_A	375	Ribosomal RNA large subunit methyltransferase G; 2	95.16
3ntv_A	232	MW1564 protein; rossmann fold, putative methyltran	95.15
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	95.09
2wa2_A	276	Non-structural protein 5; transferase, S-adenosyl-	95.0
1tw3_A	360	COMT, carminomycin 4-O-methyltransferase; anthracy	94.97
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	94.95
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	94.94
1qzz_A	374	RDMB, aclacinomycin-10-hydroxylase; anthracycline,	94.93
2g72_A	289	Phenylethanolamine N-methyltransferase; HET: SAM F	94.92
2p41_A	305	Type II methyltransferase; vizier, viral enzymes i	94.9
2oxt_A	265	Nucleoside-2'-O-methyltransferase; flavivirus, vir	94.88
3gru_A	295	Dimethyladenosine transferase; rossman fold, ribos	94.79
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	94.78
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	94.77
2k4m_A	153	TR8_protein, UPF0146 protein MTH_1000; alpha+beta,	94.76
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	94.74
4fsd_A	383	Arsenic methyltransferase; rossmann fold; 1.75A {C	94.73
1u2z_A	433	Histone-lysine N-methyltransferase, H3 lysine-79 s	94.72
2bm8_A	236	Cephalosporin hydroxylase CMCI; cephamycin biosynt	94.71
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	94.7
3htx_A	950	HEN1; HEN1, small RNA methyltransferase, protein-R	94.68
3u81_A	221	Catechol O-methyltransferase; neurotransmitter deg	94.67
2jjq_A	425	Uncharacterized RNA methyltransferase pyrab10780;	94.66
3ocj_A	305	Putative exported protein; structural genomics, PS	94.66
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	94.66
1uwv_A	433	23S rRNA (uracil-5-)-methyltransferase RUMA; RNA m	94.64
3c3p_A	210	Methyltransferase; NP_951602.1, structural genomic	94.59
2b25_A	336	Hypothetical protein; structural genomics, methyl	94.56
3tm4_A	373	TRNA (guanine N2-)-methyltransferase TRM14; rossma	94.56
3dp7_A	363	SAM-dependent methyltransferase; structural genomi	94.56
1fp1_D	372	Isoliquiritigenin 2'-O-methyltransferase; protein-	94.56
3lst_A	348	CALO1 methyltransferase; calicheamicin, enediyne,	94.55
1fp2_A	352	Isoflavone O-methyltransferase; protein-product co	94.53
2r3s_A	335	Uncharacterized protein; methyltransferase domain,	94.47
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	94.44
2igt_A	332	SAM dependent methyltransferase; alpha-beta sandwi	94.43
3mcz_A	352	O-methyltransferase; adomet_mtases, S-adenosylmeth	94.36
3b3j_A	480	Histone-arginine methyltransferase CARM1; protein	94.36
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	94.35
3reo_A	368	(ISO)eugenol O-methyltransferase; directed evoluti	94.34
1x19_A	359	CRTF-related protein; methyltransferase, bacterioc	94.3
1zg3_A	358	Isoflavanone 4'-O-methyltransferase; rossman fold,	94.25
2okc_A	445	Type I restriction enzyme stysji M protein; NP_813	94.15
3fzg_A	200	16S rRNA methylase; methyltransferase, plasmid, tr	94.1
3a27_A	272	TYW2, uncharacterized protein MJ1557; wybutosine m	94.1
3id6_C	232	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	94.03
3r3h_A	242	O-methyltransferase, SAM-dependent; structural gen	93.9
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	93.89
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	93.84
3p9c_A	364	Caffeic acid O-methyltransferase; S-adenosylmethio	93.81
3i53_A	332	O-methyltransferase; CO-complex, rossmann-like fol	93.78
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	93.72
3tma_A	354	Methyltransferase; thump domain; 2.05A {Thermus th	93.69
2as0_A	396	Hypothetical protein PH1915; RNA methyltransferase	93.54
2b78_A	385	Hypothetical protein SMU.776; structure genomics,	93.48
2ip2_A	334	Probable phenazine-specific methyltransferase; pyo	93.45
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	93.35
3c0k_A	396	UPF0064 protein YCCW; PUA domain, adoMet dependent	93.33
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	93.28
3gwz_A	369	MMCR; methyltransferase, mitomycin, S-adenosyl met	93.25
2oyr_A	258	UPF0341 protein YHIQ; alpha-beta protein, structur	93.2
2ar0_A	541	M.ecoki, type I restriction enzyme ecoki M protein	93.15
4dmg_A	393	Putative uncharacterized protein TTHA1493; rRNA, m	93.02
3bt7_A	369	TRNA (uracil-5-)-methyltransferase; methyluridine,	92.84
1uir_A	314	Polyamine aminopropyltransferase; spermidien synth	92.82
2i7c_A	283	Spermidine synthase; transferase, structural genom	92.78
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	92.72
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	92.71
1inl_A	296	Spermidine synthase; beta-barrel, rossman fold, st	92.67
2o07_A	304	Spermidine synthase; structural genomics, structur	92.41
4a6d_A	353	Hydroxyindole O-methyltransferase; melatonin, circ	92.26
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	92.25
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	92.11
2pt6_A	321	Spermidine synthase; transferase, structural genom	92.07
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	91.91
3ajd_A	274	Putative methyltransferase MJ0026; tRNA, M5C, ross	91.46
3frh_A	253	16S rRNA methylase; methyltransferase domain, heli	90.97
2cmg_A	262	Spermidine synthase; transferase, putrescine amino	90.93
3ll7_A	410	Putative methyltransferase; methytransferase, stru	90.84
1sqg_A	429	SUN protein, FMU protein; rossmann-fold, mixed bet	90.82
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	90.54
3k6r_A	278	Putative transferase PH0793; structural genomics,	90.43
2zig_A	297	TTHA0409, putative modification methylase; methylt	90.39
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	90.05
1wxx_A	382	TT1595, hypothetical protein TTHA1280; thermus the	89.97
2qe6_A	274	Uncharacterized protein TFU_2867; putative methylt	89.77
3ldu_A	385	Putative methylase; structural genomics, PSI-2, pr	89.74
2yxl_A	450	PH0851 protein, 450AA long hypothetical FMU protei	88.83
3v97_A	703	Ribosomal RNA large subunit methyltransferase L; Y	88.75
2yx1_A	336	Hypothetical protein MJ0883; methyl transferase, t	88.23
1af7_A	274	Chemotaxis receptor methyltransferase CHER; chemot	88.22
3k0b_A	393	Predicted N6-adenine-specific DNA methylase; methy	88.0
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	86.03
3lcv_B	281	Sisomicin-gentamicin resistance methylase SGM; ant	85.8
2dul_A	378	N(2),N(2)-dimethylguanosine tRNA methyltransferas;	85.76
3ldg_A	384	Putative uncharacterized protein SMU.472; YPSC, me	85.59
3khk_A	544	Type I restriction-modification system methylation	84.43
3lkd_A	542	Type I restriction-modification system methyltrans	84.3
3m6w_A	464	RRNA methylase; rRNA methyltransferase, 5-methylcy	83.58
2qm3_A	373	Predicted methyltransferase; putative methyltransf	82.34
2b9e_A	309	NOL1/NOP2/SUN domain family, member 5 isoform 2; m	81.53
2frx_A	479	Hypothetical protein YEBU; rossmann-type S-adenosy	81.24
3b5i_A	374	S-adenosyl-L-methionine:salicylic acid carboxyl me	81.22
2qfm_A	364	Spermine synthase; spermidine aminopropyltransfera	80.58
3m4x_A	456	NOL1/NOP2/SUN family protein; mtase domain, PUA do	80.45

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=98.97  E-value=7.1e-10  Score=92.91  Aligned_cols=76  Identities=14%  Similarity=0.177  Sum_probs=52.3

Q ss_pred             CCCCCCCCCCCCCCcHHHHHHHHhhhhhhhccCCCCCceecCCchHHHHHHHHHhhhhhhccCcccccccccCCCccccc
Q 029423           80 KEEPDPEGMASMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEEN  159 (193)
Q Consensus        80 k~e~~~el~pS~LGtkeYWD~~Y~~EL~NF~e~gD~GEiWFGed~~d~vv~Wlk~~~~~i~q~~ip~~~d~~~~e~~e~~  159 (193)
                      |+-.+.++.++.+.+++||+++|.++...          |........+++|+..+..       +              
T Consensus        18 ~~~~~~e~~~~~~~~~~~Wd~~y~~~~~~----------~~~~~~~~~l~~~~~~~~~-------~--------------   66 (252)
T 2gb4_A           18 KEHPDAEVQKNQVLTLEDWKEKWVTRHIS----------FHQEQGHQLLKKHLDTFLK-------G--------------   66 (252)
T ss_dssp             ----CTTTTTTCCCCHHHHHHHHHHTCCT----------TCCTTCCHHHHHHHHHHHT-------T--------------
T ss_pred             cCCCCccccccccCCHHHHHHHHhcCCCC----------cccCCCCHHHHHHHHHhcc-------C--------------
Confidence            34445789999999999999999875332          2222222456677754320       0              


Q ss_pred             cccCCCCceeEeeccChHhHHHHHHCCCcc
Q 029423          160 DKYLSSWSVLDIGTGNGLLLQELSKQGYTL  189 (193)
Q Consensus       160 ~k~~~~~sILDLGCGNG~LL~eLak~GFs~  189 (193)
                         .+..+|||||||+|.++..|++.||..
T Consensus        67 ---~~~~~vLD~GCG~G~~~~~La~~G~~V   93 (252)
T 2gb4_A           67 ---QSGLRVFFPLCGKAIEMKWFADRGHTV   93 (252)
T ss_dssp             ---CCSCEEEETTCTTCTHHHHHHHTTCEE
T ss_pred             ---CCCCeEEEeCCCCcHHHHHHHHCCCeE
Confidence               135689999999999999999999954

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=98.90  E-value=1.4e-09  Score=84.23  Aligned_cols=66  Identities=24%  Similarity=0.348  Sum_probs=48.5

Q ss_pred             CCCCCcHHHHHHHHhhhhhhhccCCCCCceecCCchHHHHHHHHHhhhhhhccCcccccccccCCCccccccccCCCCce
Q 029423           89 ASMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSV  168 (193)
Q Consensus        89 pS~LGtkeYWD~~Y~~EL~NF~e~gD~GEiWFGed~~d~vv~Wlk~~~~~i~q~~ip~~~d~~~~e~~e~~~k~~~~~sI  168 (193)
                      +|.|+.++|||++|.....+.      +..||....  .+..++.+.        +                  .+..+|
T Consensus         1 g~~~~~~~~W~~~y~~~~~~~------~~~~~~~~~--~~~~~l~~~--------~------------------~~~~~v   46 (215)
T 2pxx_A            1 GSGYREVEYWDQRYQGAADSA------PYDWFGDFS--SFRALLEPE--------L------------------RPEDRI   46 (215)
T ss_dssp             CGGGGCHHHHHHHTTTTTTSC------CCCTTCCHH--HHHHHHGGG--------C------------------CTTCCE
T ss_pred             CCcccchhHHHHHhccCCCCC------CcccccCHH--HHHHHHHHh--------c------------------CCCCeE
Confidence            367899999999998765322      337887743  355665432        1                  124689


Q ss_pred             eEeeccChHhHHHHHHCCCc
Q 029423          169 LDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       169 LDLGCGNG~LL~eLak~GFs  188 (193)
                      ||||||+|.++..|++.|+.
T Consensus        47 LdiGcG~G~~~~~l~~~~~~   66 (215)
T 2pxx_A           47 LVLGCGNSALSYELFLGGFP   66 (215)
T ss_dssp             EEETCTTCSHHHHHHHTTCC
T ss_pred             EEECCCCcHHHHHHHHcCCC
Confidence            99999999999999999874

>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}

Probab=98.06  E-value=8.8e-06  Score=64.96  Aligned_cols=24  Identities=25%  Similarity=0.249  Sum_probs=21.6

Q ss_pred             CCCceeEeeccChHhHHHHHHCCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      +..+|||||||+|.++..|++.|.
T Consensus        56 ~~~~vLD~GcG~G~~~~~la~~~~   79 (245)
T 3ggd_A           56 PELPLIDFACGNGTQTKFLSQFFP   79 (245)
T ss_dssp             TTSCEEEETCTTSHHHHHHHHHSS
T ss_pred             CCCeEEEEcCCCCHHHHHHHHhCC
Confidence            356899999999999999999886

>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}

Probab=98.01  E-value=2.4e-06  Score=68.01  Aligned_cols=59  Identities=14%  Similarity=0.269  Sum_probs=40.0

Q ss_pred             cHHHHHHHHhhhhhhhccCCCCCceecCCchHHHHHHHHHhhhhhhccCcccccccccCCCccccccccCCCCceeEeec
Q 029423           94 LQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGT  173 (193)
Q Consensus        94 tkeYWD~~Y~~EL~NF~e~gD~GEiWFGed~~d~vv~Wlk~~~~~i~q~~ip~~~d~~~~e~~e~~~k~~~~~sILDLGC  173 (193)
                      ..+||+++|......          |+.......+..++....                          .+..+||||||
T Consensus        32 ~~~~w~~~~~~~~~~----------~~~~~~~~~l~~~~~~~~--------------------------~~~~~vLDiGc   75 (235)
T 3lcc_A           32 EEGGWEKCWEEEITP----------WDQGRATPLIVHLVDTSS--------------------------LPLGRALVPGC   75 (235)
T ss_dssp             HHHHHHHHHHTTCCT----------TCCSSCCHHHHHHHHTTC--------------------------SCCEEEEEETC
T ss_pred             CHHHHHHHHhcCCCC----------cccCCCCHHHHHHHHhcC--------------------------CCCCCEEEeCC
Confidence            367999999874333          443333345666654311                          12348999999


Q ss_pred             cChHhHHHHHHCCCc
Q 029423          174 GNGLLLQELSKQGYT  188 (193)
Q Consensus       174 GNG~LL~eLak~GFs  188 (193)
                      |+|.++..|++.|+.
T Consensus        76 G~G~~~~~l~~~~~~   90 (235)
T 3lcc_A           76 GGGHDVVAMASPERF   90 (235)
T ss_dssp             TTCHHHHHHCBTTEE
T ss_pred             CCCHHHHHHHhCCCe
Confidence            999999999987764

>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15

Probab=97.94  E-value=1.5e-06  Score=71.49  Aligned_cols=65  Identities=11%  Similarity=0.056  Sum_probs=40.9

Q ss_pred             CCcHHHHHHHHhhhhhhhccCCCCCceecCCchHHHHHHHHHhhhhhhccCcccccccccCCCccccccccCCCCceeEe
Q 029423           92 LGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDI  171 (193)
Q Consensus        92 LGtkeYWD~~Y~~EL~NF~e~gD~GEiWFGed~~d~vv~Wlk~~~~~i~q~~ip~~~d~~~~e~~e~~~k~~~~~sILDL  171 (193)
                      +-...||+.+|.+...+|          |    .+.++.|+.+....+...  +.                .+..+||||
T Consensus        15 ~~~~~~~~~~y~~~~~~~----------~----~~~~~~~~~~~~~~~~~~--~~----------------~~g~~vLDi   62 (263)
T 2a14_A           15 FLPRDYLATYYSFDGSPS----------P----EAEMLKFNLECLHKTFGP--GG----------------LQGDTLIDI   62 (263)
T ss_dssp             CCHHHHHHHHCCCCCSCC----------H----HHHHHHHHHHHHHHHHST--TS----------------CCEEEEEES
T ss_pred             cCHHHHHHHhcCCCcccc----------h----hhHHHHHHHHHHHHHhcC--CC----------------CCCceEEEe
Confidence            445678888887644443          1    234677775543222210  00                235689999


Q ss_pred             eccChHhHHHHHHCCCc
Q 029423          172 GTGNGLLLQELSKQGYT  188 (193)
Q Consensus       172 GCGNG~LL~eLak~GFs  188 (193)
                      |||+|.+...+++.|+.
T Consensus        63 GCG~G~~~~~~~~~~~~   79 (263)
T 2a14_A           63 GSGPTIYQVLAACDSFQ   79 (263)
T ss_dssp             SCTTCCGGGTTGGGTEE
T ss_pred             CCCccHHHHHHHHhhhc
Confidence            99999988888888874

>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43

Probab=97.84  E-value=2.5e-05  Score=62.40  Aligned_cols=24  Identities=38%  Similarity=0.682  Sum_probs=21.8

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|++
T Consensus        42 ~~~vLDlGcG~G~~~~~l~~~~~~   65 (252)
T 1wzn_A           42 VRRVLDLACGTGIPTLELAERGYE   65 (252)
T ss_dssp             CCEEEEETCTTCHHHHHHHHTTCE
T ss_pred             CCEEEEeCCCCCHHHHHHHHCCCe
Confidence            468999999999999999999874

>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}

Probab=97.80  E-value=7.4e-06  Score=64.74  Aligned_cols=24  Identities=42%  Similarity=0.704  Sum_probs=21.7

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|+.
T Consensus        54 ~~~vLDiG~G~G~~~~~l~~~~~~   77 (242)
T 3l8d_A           54 EAEVLDVGCGDGYGTYKLSRTGYK   77 (242)
T ss_dssp             TCEEEEETCTTSHHHHHHHHTTCE
T ss_pred             CCeEEEEcCCCCHHHHHHHHcCCe
Confidence            468999999999999999999864

>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*

Probab=97.73  E-value=2.5e-05  Score=59.59  Aligned_cols=24  Identities=38%  Similarity=0.547  Sum_probs=21.5

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|+.
T Consensus        33 ~~~vLdiG~G~G~~~~~l~~~~~~   56 (199)
T 2xvm_A           33 PGKTLDLGCGNGRNSLYLAANGYD   56 (199)
T ss_dssp             SCEEEEETCTTSHHHHHHHHTTCE
T ss_pred             CCeEEEEcCCCCHHHHHHHHCCCe
Confidence            458999999999999999999864

>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*

Probab=97.66  E-value=3.1e-05  Score=61.80  Aligned_cols=23  Identities=22%  Similarity=0.101  Sum_probs=21.1

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|.
T Consensus        79 ~~~vLD~gcG~G~~~~~la~~~~  101 (241)
T 3gdh_A           79 CDVVVDAFCGVGGNTIQFALTGM  101 (241)
T ss_dssp             CSEEEETTCTTSHHHHHHHHTTC
T ss_pred             CCEEEECccccCHHHHHHHHcCC
Confidence            56899999999999999999874

>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*

Probab=97.65  E-value=1.2e-05  Score=64.30  Aligned_cols=23  Identities=17%  Similarity=0.294  Sum_probs=21.0

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|+
T Consensus        57 ~~~vLDlGcG~G~~~~~l~~~~~   79 (265)
T 2i62_A           57 GELLIDIGSGPTIYQLLSACESF   79 (265)
T ss_dssp             EEEEEEESCTTCCGGGTTGGGTE
T ss_pred             CCEEEEECCCccHHHHHHhhccc
Confidence            45899999999999999999887

>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*

Probab=97.59  E-value=5.7e-05  Score=61.78  Aligned_cols=24  Identities=29%  Similarity=0.541  Sum_probs=21.8

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|++
T Consensus        58 ~~~vLDiGcG~G~~~~~l~~~~~~   81 (293)
T 3thr_A           58 CHRVLDVACGTGVDSIMLVEEGFS   81 (293)
T ss_dssp             CCEEEETTCTTSHHHHHHHHTTCE
T ss_pred             CCEEEEecCCCCHHHHHHHHCCCe
Confidence            468999999999999999999874

>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A

Probab=97.58  E-value=3.3e-05  Score=60.36  Aligned_cols=24  Identities=17%  Similarity=0.227  Sum_probs=21.4

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|..
T Consensus        43 ~~~vLDiGcG~G~~~~~l~~~~~~   66 (250)
T 2p7i_A           43 PGNLLELGSFKGDFTSRLQEHFND   66 (250)
T ss_dssp             SSCEEEESCTTSHHHHHHTTTCSC
T ss_pred             CCcEEEECCCCCHHHHHHHHhCCc
Confidence            457999999999999999998863

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=97.54  E-value=7.1e-05  Score=57.82  Aligned_cols=24  Identities=25%  Similarity=0.360  Sum_probs=21.3

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|.+
T Consensus        47 ~~~vLdiG~G~G~~~~~l~~~~~~   70 (218)
T 3ou2_A           47 RGDVLELASGTGYWTRHLSGLADR   70 (218)
T ss_dssp             CSEEEEESCTTSHHHHHHHHHSSE
T ss_pred             CCeEEEECCCCCHHHHHHHhcCCe
Confidence            458999999999999999998764

>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*

Probab=97.51  E-value=3.6e-05  Score=60.11  Aligned_cols=23  Identities=22%  Similarity=0.304  Sum_probs=20.7

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|.
T Consensus        52 ~~~vLDiGcG~G~~~~~l~~~~~   74 (216)
T 3ofk_A           52 VSNGLEIGCAAGAFTEKLAPHCK   74 (216)
T ss_dssp             EEEEEEECCTTSHHHHHHGGGEE
T ss_pred             CCcEEEEcCCCCHHHHHHHHcCC
Confidence            46899999999999999999874

>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}

Probab=97.47  E-value=0.00011  Score=56.67  Aligned_cols=24  Identities=42%  Similarity=0.732  Sum_probs=21.6

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|+.
T Consensus        53 ~~~vLdiG~G~G~~~~~l~~~~~~   76 (227)
T 3e8s_A           53 PERVLDLGCGEGWLLRALADRGIE   76 (227)
T ss_dssp             CSEEEEETCTTCHHHHHHHTTTCE
T ss_pred             CCEEEEeCCCCCHHHHHHHHCCCE
Confidence            468999999999999999999764

>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}

Probab=97.45  E-value=7e-05  Score=56.36  Aligned_cols=24  Identities=42%  Similarity=0.513  Sum_probs=21.4

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|..
T Consensus        47 ~~~vLdiG~G~G~~~~~l~~~~~~   70 (195)
T 3cgg_A           47 GAKILDAGCGQGRIGGYLSKQGHD   70 (195)
T ss_dssp             TCEEEEETCTTTHHHHHHHHTTCE
T ss_pred             CCeEEEECCCCCHHHHHHHHCCCc
Confidence            568999999999999999998763

>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42

Probab=97.44  E-value=4.9e-05  Score=60.75  Aligned_cols=24  Identities=25%  Similarity=0.355  Sum_probs=21.2

Q ss_pred             CCCceeEeeccChHhHHHHHHCCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      +..+|||||||+|.++..|++.++
T Consensus        79 ~~~~vLDiGcG~G~~~~~l~~~~~  102 (241)
T 2ex4_A           79 GTSCALDCGAGIGRITKRLLLPLF  102 (241)
T ss_dssp             CCSEEEEETCTTTHHHHHTTTTTC
T ss_pred             CCCEEEEECCCCCHHHHHHHHhcC
Confidence            356899999999999999998874

>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42

Probab=97.44  E-value=7.1e-05  Score=59.49  Aligned_cols=24  Identities=29%  Similarity=0.450  Sum_probs=21.2

Q ss_pred             CCCceeEeeccChHhHHHHHHCCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      +..+|||||||+|.++..|++.|+
T Consensus        93 ~~~~vLDiG~G~G~~~~~l~~~~~  116 (254)
T 1xtp_A           93 GTSRALDCGAGIGRITKNLLTKLY  116 (254)
T ss_dssp             CCSEEEEETCTTTHHHHHTHHHHC
T ss_pred             CCCEEEEECCCcCHHHHHHHHhhc
Confidence            356899999999999999998874

>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32

Probab=97.31  E-value=0.00032  Score=54.47  Aligned_cols=23  Identities=43%  Similarity=0.527  Sum_probs=20.9

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|+
T Consensus        52 ~~~vlD~gcG~G~~~~~l~~~~~   74 (200)
T 1ne2_A           52 GRSVIDAGTGNGILACGSYLLGA   74 (200)
T ss_dssp             TSEEEEETCTTCHHHHHHHHTTB
T ss_pred             CCEEEEEeCCccHHHHHHHHcCC
Confidence            46899999999999999999875

>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}

Probab=97.30  E-value=0.00015  Score=60.82  Aligned_cols=24  Identities=25%  Similarity=0.176  Sum_probs=21.4

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.+...|++.|..
T Consensus        40 ~~~vLDvGcGtG~~~~~l~~~~~~   63 (257)
T 4hg2_A           40 RGDALDCGCGSGQASLGLAEFFER   63 (257)
T ss_dssp             SSEEEEESCTTTTTHHHHHTTCSE
T ss_pred             CCCEEEEcCCCCHHHHHHHHhCCE
Confidence            358999999999999999999864

>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}

Probab=97.29  E-value=0.00019  Score=56.31  Aligned_cols=23  Identities=30%  Similarity=0.427  Sum_probs=20.6

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|.
T Consensus        41 ~~~vLdiG~G~G~~~~~l~~~~~   63 (239)
T 3bxo_A           41 ASSLLDVACGTGTHLEHFTKEFG   63 (239)
T ss_dssp             CCEEEEETCTTSHHHHHHHHHHS
T ss_pred             CCeEEEecccCCHHHHHHHHhCC
Confidence            46899999999999999999865

>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*

Probab=97.28  E-value=0.00025  Score=57.20  Aligned_cols=24  Identities=33%  Similarity=0.458  Sum_probs=21.4

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|+.
T Consensus        51 ~~~vLDiGcG~G~~~~~l~~~~~~   74 (263)
T 3pfg_A           51 AASLLDVACGTGMHLRHLADSFGT   74 (263)
T ss_dssp             CCEEEEETCTTSHHHHHHTTTSSE
T ss_pred             CCcEEEeCCcCCHHHHHHHHcCCe
Confidence            468999999999999999998763

>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}

Probab=97.27  E-value=0.00024  Score=54.81  Aligned_cols=24  Identities=29%  Similarity=0.493  Sum_probs=21.6

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|+.
T Consensus        42 ~~~vLDiGcG~G~~~~~l~~~~~~   65 (203)
T 3h2b_A           42 DGVILDVGSGTGRWTGHLASLGHQ   65 (203)
T ss_dssp             CSCEEEETCTTCHHHHHHHHTTCC
T ss_pred             CCeEEEecCCCCHHHHHHHhcCCe
Confidence            458999999999999999999874

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=97.25  E-value=0.0001  Score=58.87  Aligned_cols=24  Identities=38%  Similarity=0.603  Sum_probs=21.7

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|+.
T Consensus        42 ~~~vLDiGcG~G~~~~~l~~~~~~   65 (240)
T 3dli_A           42 CRRVLDIGCGRGEFLELCKEEGIE   65 (240)
T ss_dssp             CSCEEEETCTTTHHHHHHHHHTCC
T ss_pred             CCeEEEEeCCCCHHHHHHHhCCCc
Confidence            468999999999999999998774

>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*

Probab=97.21  E-value=0.00022  Score=57.72  Aligned_cols=23  Identities=39%  Similarity=0.526  Sum_probs=20.8

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|+
T Consensus        65 ~~~vLDiGcG~G~~~~~l~~~~~   87 (298)
T 1ri5_A           65 GDSVLDLGCGKGGDLLKYERAGI   87 (298)
T ss_dssp             TCEEEEETCTTTTTHHHHHHHTC
T ss_pred             CCeEEEECCCCCHHHHHHHHCCC
Confidence            56899999999999999999876

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=97.19  E-value=7.7e-05  Score=58.94  Aligned_cols=22  Identities=32%  Similarity=0.410  Sum_probs=20.3

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.++..|++.|
T Consensus        71 ~~~vLdiG~G~G~~~~~l~~~~   92 (231)
T 1vbf_A           71 GQKVLEIGTGIGYYTALIAEIV   92 (231)
T ss_dssp             TCEEEEECCTTSHHHHHHHHHS
T ss_pred             CCEEEEEcCCCCHHHHHHHHHc
Confidence            4689999999999999999987

>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}

Probab=97.10  E-value=0.00056  Score=53.19  Aligned_cols=24  Identities=21%  Similarity=0.545  Sum_probs=21.6

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|+.
T Consensus        44 ~~~vLDiGcG~G~~~~~l~~~~~~   67 (211)
T 3e23_A           44 GAKILELGCGAGYQAEAMLAAGFD   67 (211)
T ss_dssp             TCEEEESSCTTSHHHHHHHHTTCE
T ss_pred             CCcEEEECCCCCHHHHHHHHcCCe
Confidence            468999999999999999999764

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=97.04  E-value=0.00056  Score=53.12  Aligned_cols=23  Identities=39%  Similarity=0.619  Sum_probs=21.0

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|.
T Consensus        61 ~~~vLDiG~G~G~~~~~l~~~~~   83 (205)
T 3grz_A           61 PLTVADVGTGSGILAIAAHKLGA   83 (205)
T ss_dssp             CCEEEEETCTTSHHHHHHHHTTC
T ss_pred             CCEEEEECCCCCHHHHHHHHCCC
Confidence            56899999999999999999876

>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}

Probab=97.04  E-value=0.00033  Score=57.29  Aligned_cols=24  Identities=29%  Similarity=0.579  Sum_probs=20.9

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|..
T Consensus        58 ~~~vLDiGcG~G~~~~~l~~~~~~   81 (279)
T 3ccf_A           58 GEFILDLGCGTGQLTEKIAQSGAE   81 (279)
T ss_dssp             TCEEEEETCTTSHHHHHHHHTTCE
T ss_pred             CCEEEEecCCCCHHHHHHHhCCCe
Confidence            468999999999999999996653

>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46

Probab=96.98  E-value=0.00039  Score=51.61  Aligned_cols=24  Identities=25%  Similarity=0.304  Sum_probs=21.6

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|..
T Consensus        42 ~~~vLD~GcG~G~~~~~l~~~~~~   65 (171)
T 1ws6_A           42 RGRFLDPFAGSGAVGLEAASEGWE   65 (171)
T ss_dssp             CCEEEEETCSSCHHHHHHHHTTCE
T ss_pred             CCeEEEeCCCcCHHHHHHHHCCCe
Confidence            458999999999999999999864

>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41

Probab=96.97  E-value=0.0008  Score=53.04  Aligned_cols=21  Identities=24%  Similarity=0.344  Sum_probs=18.2

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        48 ~~~vLDiG~G~G~~~~~l~~~   68 (219)
T 1vlm_A           48 EGRGVEIGVGTGRFAVPLKIK   68 (219)
T ss_dssp             SSCEEEETCTTSTTHHHHTCC
T ss_pred             CCcEEEeCCCCCHHHHHHHHH
Confidence            458999999999999988764

>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}

Probab=96.95  E-value=0.00081  Score=51.52  Aligned_cols=19  Identities=47%  Similarity=0.758  Sum_probs=18.2

Q ss_pred             ceeEeeccChHhHHHHHHC
Q 029423          167 SVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       167 sILDLGCGNG~LL~eLak~  185 (193)
                      +|||||||+|.++..|++.
T Consensus        46 ~vLdiG~G~G~~~~~l~~~   64 (219)
T 3dlc_A           46 TCIDIGSGPGALSIALAKQ   64 (219)
T ss_dssp             EEEEETCTTSHHHHHHHHH
T ss_pred             EEEEECCCCCHHHHHHHHc
Confidence            8999999999999999987

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=96.88  E-value=0.00038  Score=64.28  Aligned_cols=25  Identities=32%  Similarity=0.618  Sum_probs=23.0

Q ss_pred             CCceeEeeccChHhHHHHHHCCCcc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYTL  189 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs~  189 (193)
                      ..+|||||||.|.|...|++.|++.
T Consensus        67 ~~~vLDvGCG~G~~~~~la~~ga~V   91 (569)
T 4azs_A           67 PLNVLDLGCAQGFFSLSLASKGATI   91 (569)
T ss_dssp             CCEEEEETCTTSHHHHHHHHTTCEE
T ss_pred             CCeEEEECCCCcHHHHHHHhCCCEE
Confidence            4689999999999999999999865

>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}

Probab=96.88  E-value=0.00054  Score=53.33  Aligned_cols=24  Identities=38%  Similarity=0.473  Sum_probs=21.5

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|+.
T Consensus        46 ~~~vLDiGcG~G~~~~~l~~~~~~   69 (220)
T 3hnr_A           46 FGNVLEFGVGTGNLTNKLLLAGRT   69 (220)
T ss_dssp             CSEEEEECCTTSHHHHHHHHTTCE
T ss_pred             CCeEEEeCCCCCHHHHHHHhCCCe
Confidence            568999999999999999998764

>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41

Probab=96.81  E-value=0.00089  Score=54.27  Aligned_cols=24  Identities=33%  Similarity=0.576  Sum_probs=21.5

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|+.
T Consensus        55 ~~~vLDiGcG~G~~~~~l~~~~~~   78 (260)
T 2avn_A           55 PCRVLDLGGGTGKWSLFLQERGFE   78 (260)
T ss_dssp             CCEEEEETCTTCHHHHHHHTTTCE
T ss_pred             CCeEEEeCCCcCHHHHHHHHcCCe
Confidence            458999999999999999998864

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.80  E-value=0.00025  Score=55.40  Aligned_cols=22  Identities=32%  Similarity=0.376  Sum_probs=19.9

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.++..|++.+
T Consensus        78 ~~~vLdiG~G~G~~~~~l~~~~   99 (215)
T 2yxe_A           78 GMKVLEIGTGCGYHAAVTAEIV   99 (215)
T ss_dssp             TCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCccHHHHHHHHHh
Confidence            5689999999999999999875

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.76  E-value=0.0005  Score=53.45  Aligned_cols=23  Identities=35%  Similarity=0.397  Sum_probs=20.6

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|.
T Consensus        78 ~~~vLdiG~G~G~~~~~la~~~~  100 (210)
T 3lbf_A           78 QSRVLEIGTGSGYQTAILAHLVQ  100 (210)
T ss_dssp             TCEEEEECCTTSHHHHHHHHHSS
T ss_pred             CCEEEEEcCCCCHHHHHHHHhCC
Confidence            56899999999999999999854

>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}

Probab=96.75  E-value=0.00072  Score=54.01  Aligned_cols=24  Identities=29%  Similarity=0.393  Sum_probs=22.0

Q ss_pred             CCCceeEeeccChHhHHHHHHCCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      +..+|||||||+|.++..|++.|+
T Consensus        44 ~~~~vLD~GcG~G~~~~~l~~~~~   67 (253)
T 3g5l_A           44 NQKTVLDLGCGFGWHCIYAAEHGA   67 (253)
T ss_dssp             TTCEEEEETCTTCHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCCHHHHHHHHcCC
Confidence            457899999999999999999987

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=96.74  E-value=0.0017  Score=53.18  Aligned_cols=23  Identities=30%  Similarity=0.398  Sum_probs=20.5

Q ss_pred             CCceeEeeccChHhHHHHHHC-CC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ-GY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~-GF  187 (193)
                      ..+|||||||+|.++..|++. |.
T Consensus        83 ~~~vLDiGcG~G~~~~~l~~~~~~  106 (297)
T 2o57_A           83 QAKGLDLGAGYGGAARFLVRKFGV  106 (297)
T ss_dssp             TCEEEEETCTTSHHHHHHHHHHCC
T ss_pred             CCEEEEeCCCCCHHHHHHHHHhCC
Confidence            568999999999999999987 65

>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46

Probab=96.74  E-value=0.00078  Score=50.97  Aligned_cols=23  Identities=35%  Similarity=0.385  Sum_probs=20.8

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|.
T Consensus        32 ~~~vLDlGcG~G~~~~~l~~~~~   54 (177)
T 2esr_A           32 GGRVLDLFAGSGGLAIEAVSRGM   54 (177)
T ss_dssp             SCEEEEETCTTCHHHHHHHHTTC
T ss_pred             CCeEEEeCCCCCHHHHHHHHcCC
Confidence            45899999999999999999875

>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}

Probab=96.74  E-value=0.0013  Score=49.04  Aligned_cols=22  Identities=32%  Similarity=0.506  Sum_probs=19.4

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.++..|++.+
T Consensus        36 ~~~vLdiG~G~G~~~~~l~~~~   57 (183)
T 2yxd_A           36 DDVVVDVGCGSGGMTVEIAKRC   57 (183)
T ss_dssp             TCEEEEESCCCSHHHHHHHTTS
T ss_pred             CCEEEEeCCCCCHHHHHHHhcC
Confidence            4689999999999999999843

>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43

Probab=96.73  E-value=0.0013  Score=51.08  Aligned_cols=23  Identities=30%  Similarity=0.387  Sum_probs=20.9

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|.
T Consensus        39 ~~~vLDlG~G~G~~~~~l~~~~~   61 (227)
T 1ve3_A           39 RGKVLDLACGVGGFSFLLEDYGF   61 (227)
T ss_dssp             CCEEEEETCTTSHHHHHHHHTTC
T ss_pred             CCeEEEEeccCCHHHHHHHHcCC
Confidence            45899999999999999999876

>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E

Probab=96.71  E-value=0.0006  Score=55.25  Aligned_cols=23  Identities=35%  Similarity=0.426  Sum_probs=20.6

Q ss_pred             CCCceeEeeccChHhHHHHHHCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~G  186 (193)
                      +..+|||||||+|.++..|++.+
T Consensus        49 ~~~~vLDiGcG~G~~~~~la~~~   71 (246)
T 2vdv_E           49 KKVTIADIGCGFGGLMIDLSPAF   71 (246)
T ss_dssp             CCEEEEEETCTTSHHHHHHHHHS
T ss_pred             CCCEEEEEcCCCCHHHHHHHHhC
Confidence            35689999999999999999986

>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}

Probab=96.69  E-value=0.0019  Score=50.32  Aligned_cols=19  Identities=32%  Similarity=0.438  Sum_probs=16.7

Q ss_pred             CCceeEeeccChHhHHHHH
Q 029423          165 SWSVLDIGTGNGLLLQELS  183 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLa  183 (193)
                      ..+|||||||+|.++..|+
T Consensus        68 ~~~vLDiG~G~G~~~~~l~   86 (215)
T 2zfu_A           68 SLVVADFGCGDCRLASSIR   86 (215)
T ss_dssp             TSCEEEETCTTCHHHHHCC
T ss_pred             CCeEEEECCcCCHHHHHhh
Confidence            4689999999999998873

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=96.67  E-value=0.00085  Score=57.14  Aligned_cols=26  Identities=19%  Similarity=0.363  Sum_probs=22.8

Q ss_pred             CCCceeEeeccChHhHHHHHHCCCcc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGYTL  189 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GFs~  189 (193)
                      +..+|||||||+|.+...|++.|+..
T Consensus        45 ~g~~VLDlGcGtG~~a~~La~~g~~V   70 (261)
T 3iv6_A           45 PGSTVAVIGASTRFLIEKALERGASV   70 (261)
T ss_dssp             TTCEEEEECTTCHHHHHHHHHTTCEE
T ss_pred             CcCEEEEEeCcchHHHHHHHhcCCEE
Confidence            35689999999999999999998753

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=96.66  E-value=0.00093  Score=52.47  Aligned_cols=23  Identities=22%  Similarity=0.443  Sum_probs=21.3

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|+
T Consensus        44 ~~~vLdiG~G~G~~~~~l~~~~~   66 (243)
T 3bkw_A           44 GLRIVDLGCGFGWFCRWAHEHGA   66 (243)
T ss_dssp             TCEEEEETCTTCHHHHHHHHTTC
T ss_pred             CCEEEEEcCcCCHHHHHHHHCCC
Confidence            56899999999999999999987

>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32

Probab=96.66  E-value=0.001  Score=51.60  Aligned_cols=24  Identities=29%  Similarity=0.351  Sum_probs=21.5

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|+.
T Consensus        50 ~~~vlD~g~G~G~~~~~l~~~~~~   73 (207)
T 1wy7_A           50 GKVVADLGAGTGVLSYGALLLGAK   73 (207)
T ss_dssp             TCEEEEETCTTCHHHHHHHHTTCS
T ss_pred             cCEEEEeeCCCCHHHHHHHHcCCC
Confidence            568999999999999999999763

>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}

Probab=96.65  E-value=0.0009  Score=54.69  Aligned_cols=24  Identities=42%  Similarity=0.552  Sum_probs=22.0

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|+.
T Consensus       121 ~~~vLD~GcG~G~~~~~l~~~g~~  144 (286)
T 3m70_A          121 PCKVLDLGCGQGRNSLYLSLLGYD  144 (286)
T ss_dssp             SCEEEEESCTTCHHHHHHHHTTCE
T ss_pred             CCcEEEECCCCCHHHHHHHHCCCe
Confidence            568999999999999999999874

>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*

Probab=96.64  E-value=0.00085  Score=55.47  Aligned_cols=23  Identities=26%  Similarity=0.410  Sum_probs=21.1

Q ss_pred             CceeEeeccChHhHHHHHHCCCc
Q 029423          166 WSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      .+|||||||+|.++..|++.|+.
T Consensus        84 ~~vLDlGcG~G~~~~~l~~~~~~  106 (299)
T 3g2m_A           84 GPVLELAAGMGRLTFPFLDLGWE  106 (299)
T ss_dssp             SCEEEETCTTTTTHHHHHTTTCC
T ss_pred             CcEEEEeccCCHHHHHHHHcCCe
Confidence            48999999999999999999864

>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}

Probab=96.62  E-value=0.00099  Score=54.93  Aligned_cols=23  Identities=26%  Similarity=0.426  Sum_probs=21.1

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|.
T Consensus        38 g~~VLDiGcGtG~~t~~la~~g~   60 (232)
T 3opn_A           38 GKTCLDIGSSTGGFTDVMLQNGA   60 (232)
T ss_dssp             TCEEEEETCTTSHHHHHHHHTTC
T ss_pred             CCEEEEEccCCCHHHHHHHhcCC
Confidence            45899999999999999999985

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=96.61  E-value=0.00077  Score=53.66  Aligned_cols=24  Identities=25%  Similarity=0.302  Sum_probs=21.4

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|..
T Consensus        49 ~~~vLDiGcG~G~~~~~l~~~~~~   72 (226)
T 3m33_A           49 QTRVLEAGCGHGPDAARFGPQAAR   72 (226)
T ss_dssp             TCEEEEESCTTSHHHHHHGGGSSE
T ss_pred             CCeEEEeCCCCCHHHHHHHHcCCE
Confidence            468999999999999999998753

>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}

Probab=96.61  E-value=0.0011  Score=51.10  Aligned_cols=24  Identities=33%  Similarity=0.419  Sum_probs=21.1

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..+++.|+.
T Consensus        45 ~~~vLDlgcG~G~~~~~~~~~~~~   68 (189)
T 3p9n_A           45 GLAVLDLYAGSGALGLEALSRGAA   68 (189)
T ss_dssp             TCEEEEETCTTCHHHHHHHHTTCS
T ss_pred             CCEEEEeCCCcCHHHHHHHHCCCC
Confidence            468999999999999999988763

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.59  E-value=0.0018  Score=53.23  Aligned_cols=23  Identities=43%  Similarity=0.570  Sum_probs=21.2

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|.
T Consensus       121 ~~~VLDiGcG~G~l~~~la~~g~  143 (254)
T 2nxc_A          121 GDKVLDLGTGSGVLAIAAEKLGG  143 (254)
T ss_dssp             TCEEEEETCTTSHHHHHHHHTTC
T ss_pred             CCEEEEecCCCcHHHHHHHHhCC
Confidence            46899999999999999999886

>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}

Probab=96.57  E-value=0.0012  Score=54.47  Aligned_cols=20  Identities=20%  Similarity=0.430  Sum_probs=18.6

Q ss_pred             CCceeEeeccChHhHHHHHH
Q 029423          165 SWSVLDIGTGNGLLLQELSK  184 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak  184 (193)
                      ..+|||||||+|.++..|++
T Consensus        37 ~~~vLDiGcG~G~~~~~la~   56 (299)
T 3g5t_A           37 RKLLVDVGCGPGTATLQMAQ   56 (299)
T ss_dssp             CSEEEEETCTTTHHHHHHHH
T ss_pred             CCEEEEECCCCCHHHHHHHH
Confidence            56899999999999999996

>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43

Probab=96.54  E-value=0.0008  Score=52.62  Aligned_cols=24  Identities=25%  Similarity=0.239  Sum_probs=21.5

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|+.
T Consensus        38 ~~~vLdiG~G~G~~~~~l~~~~~~   61 (246)
T 1y8c_A           38 FDDYLDLACGTGNLTENLCPKFKN   61 (246)
T ss_dssp             TTEEEEETCTTSTTHHHHGGGSSE
T ss_pred             CCeEEEeCCCCCHHHHHHHHCCCc
Confidence            568999999999999999998764

>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46

Probab=96.53  E-value=0.0011  Score=50.05  Aligned_cols=23  Identities=30%  Similarity=0.351  Sum_probs=20.4

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|.
T Consensus        45 ~~~vLD~GcG~G~~~~~~~~~~~   67 (187)
T 2fhp_A           45 GGMALDLYSGSGGLAIEAVSRGM   67 (187)
T ss_dssp             SCEEEETTCTTCHHHHHHHHTTC
T ss_pred             CCCEEEeCCccCHHHHHHHHcCC
Confidence            46899999999999999998764

>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53

Probab=96.53  E-value=0.0012  Score=52.74  Aligned_cols=21  Identities=29%  Similarity=0.575  Sum_probs=19.3

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        39 ~~~vLDiGcG~G~~~~~la~~   59 (213)
T 2fca_A           39 NPIHIEVGTGKGQFISGMAKQ   59 (213)
T ss_dssp             CCEEEEECCTTSHHHHHHHHH
T ss_pred             CceEEEEecCCCHHHHHHHHH
Confidence            468999999999999999987

>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}

Probab=96.50  E-value=0.0011  Score=53.84  Aligned_cols=24  Identities=33%  Similarity=0.454  Sum_probs=21.4

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|.+
T Consensus        35 ~~~vLDiGcG~G~~~~~l~~~~~~   58 (261)
T 3ege_A           35 GSVIADIGAGTGGYSVALANQGLF   58 (261)
T ss_dssp             TCEEEEETCTTSHHHHHHHTTTCE
T ss_pred             CCEEEEEcCcccHHHHHHHhCCCE
Confidence            568999999999999999997754

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=96.50  E-value=0.0012  Score=55.20  Aligned_cols=22  Identities=18%  Similarity=0.281  Sum_probs=19.9

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      ++.+|||||||+|.++..|++.
T Consensus        70 ~~~~vLDlGcGtG~~~~~la~~   91 (261)
T 4gek_A           70 PGTQVYDLGCSLGAATLSVRRN   91 (261)
T ss_dssp             TTCEEEEETCTTTHHHHHHHHT
T ss_pred             CCCEEEEEeCCCCHHHHHHHHh
Confidence            4678999999999999999986

>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}

Probab=96.47  E-value=0.00083  Score=55.16  Aligned_cols=22  Identities=45%  Similarity=0.518  Sum_probs=19.7

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||+|.++..|++.
T Consensus        46 ~~~~vLDiGcG~G~~~~~la~~   67 (235)
T 3ckk_A           46 AQVEFADIGCGYGGLLVELSPL   67 (235)
T ss_dssp             CCEEEEEETCTTCHHHHHHGGG
T ss_pred             CCCeEEEEccCCcHHHHHHHHH
Confidence            3568999999999999999986

>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}

Probab=96.46  E-value=0.0014  Score=53.53  Aligned_cols=24  Identities=29%  Similarity=0.505  Sum_probs=21.6

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|+.
T Consensus        69 ~~~vLDiGcG~G~~~~~l~~~~~~   92 (285)
T 4htf_A           69 KLRVLDAGGGEGQTAIKMAERGHQ   92 (285)
T ss_dssp             CCEEEEETCTTCHHHHHHHHTTCE
T ss_pred             CCEEEEeCCcchHHHHHHHHCCCE
Confidence            468999999999999999999764

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=96.46  E-value=0.0012  Score=51.30  Aligned_cols=22  Identities=27%  Similarity=0.299  Sum_probs=20.3

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.++..|++.|
T Consensus        41 ~~~vLDiG~G~G~~~~~la~~~   62 (204)
T 3e05_A           41 DLVMWDIGAGSASVSIEASNLM   62 (204)
T ss_dssp             TCEEEEETCTTCHHHHHHHHHC
T ss_pred             CCEEEEECCCCCHHHHHHHHHC
Confidence            5689999999999999999986

>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.45  E-value=0.001  Score=53.11  Aligned_cols=23  Identities=17%  Similarity=0.309  Sum_probs=20.6

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.++
T Consensus        61 ~~~vLDiGcGtG~~~~~l~~~~~   83 (236)
T 1zx0_A           61 GGRVLEVGFGMAIAASKVQEAPI   83 (236)
T ss_dssp             CEEEEEECCTTSHHHHHHHTSCE
T ss_pred             CCeEEEEeccCCHHHHHHHhcCC
Confidence            56899999999999999988765

>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3

Probab=96.45  E-value=0.0012  Score=53.15  Aligned_cols=22  Identities=23%  Similarity=0.342  Sum_probs=19.4

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||+|.++..|++.
T Consensus        57 ~g~~VLDlGcGtG~~~~~la~~   78 (210)
T 1nt2_A           57 GDERVLYLGAASGTTVSHLADI   78 (210)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHH
T ss_pred             CCCEEEEECCcCCHHHHHHHHH
Confidence            3568999999999999999986

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.44  E-value=0.00097  Score=53.40  Aligned_cols=22  Identities=27%  Similarity=0.448  Sum_probs=19.8

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.++..|++.+
T Consensus        92 ~~~vLdiG~G~G~~~~~la~~~  113 (235)
T 1jg1_A           92 GMNILEVGTGSGWNAALISEIV  113 (235)
T ss_dssp             TCCEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEEeCCcCHHHHHHHHHh
Confidence            4689999999999999999875

>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A

Probab=96.44  E-value=0.0012  Score=52.44  Aligned_cols=24  Identities=29%  Similarity=0.541  Sum_probs=21.2

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|.+
T Consensus        40 ~~~vLDiG~G~G~~~~~l~~~~~~   63 (263)
T 2yqz_A           40 EPVFLELGVGTGRIALPLIARGYR   63 (263)
T ss_dssp             CCEEEEETCTTSTTHHHHHTTTCE
T ss_pred             CCEEEEeCCcCCHHHHHHHHCCCE
Confidence            568999999999999999998753

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=96.43  E-value=0.0013  Score=52.41  Aligned_cols=23  Identities=26%  Similarity=0.192  Sum_probs=20.7

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.+.
T Consensus        47 ~~~vLDiG~G~G~~~~~l~~~~~   69 (257)
T 3f4k_A           47 DAKIADIGCGTGGQTLFLADYVK   69 (257)
T ss_dssp             TCEEEEETCTTSHHHHHHHHHCC
T ss_pred             CCeEEEeCCCCCHHHHHHHHhCC
Confidence            46899999999999999999864

>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*

Probab=96.43  E-value=0.0013  Score=53.25  Aligned_cols=22  Identities=32%  Similarity=0.416  Sum_probs=19.8

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ...|||||||+|.++..|++.+
T Consensus        35 ~~~vLDiGcG~G~~~~~lA~~~   56 (218)
T 3dxy_A           35 APVTLEIGFGMGASLVAMAKDR   56 (218)
T ss_dssp             CCEEEEESCTTCHHHHHHHHHC
T ss_pred             CCeEEEEeeeChHHHHHHHHHC
Confidence            5689999999999999999874

>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}

Probab=96.43  E-value=0.0024  Score=53.25  Aligned_cols=23  Identities=26%  Similarity=0.348  Sum_probs=21.0

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||.|.++..|++.|.
T Consensus        80 ~~~vLDlG~G~G~~~~~~a~~~~  102 (281)
T 3bzb_A           80 GKTVCELGAGAGLVSIVAFLAGA  102 (281)
T ss_dssp             TCEEEETTCTTSHHHHHHHHTTC
T ss_pred             CCeEEEecccccHHHHHHHHcCC
Confidence            45899999999999999999886

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.42  E-value=0.0015  Score=48.89  Aligned_cols=22  Identities=27%  Similarity=0.373  Sum_probs=20.2

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.++..|++.+
T Consensus        34 ~~~vldiG~G~G~~~~~l~~~~   55 (192)
T 1l3i_A           34 NDVAVDVGCGTGGVTLELAGRV   55 (192)
T ss_dssp             TCEEEEESCTTSHHHHHHHTTS
T ss_pred             CCEEEEECCCCCHHHHHHHHhc
Confidence            5689999999999999999887

>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*

Probab=96.42  E-value=0.00066  Score=55.91  Aligned_cols=21  Identities=33%  Similarity=0.672  Sum_probs=18.8

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus       110 ~~~vLDlG~GsG~~~~~la~~  130 (276)
T 2b3t_A          110 PCRILDLGTGTGAIALALASE  130 (276)
T ss_dssp             CCEEEEETCTTSHHHHHHHHH
T ss_pred             CCEEEEecCCccHHHHHHHHh
Confidence            458999999999999999965

>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}

Probab=96.38  E-value=0.0023  Score=50.20  Aligned_cols=21  Identities=29%  Similarity=0.409  Sum_probs=18.8

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        34 ~~~vLdiG~G~G~~~~~l~~~   54 (243)
T 3d2l_A           34 GKRIADIGCGTGTATLLLADH   54 (243)
T ss_dssp             TCEEEEESCTTCHHHHHHTTT
T ss_pred             CCeEEEecCCCCHHHHHHhhC
Confidence            358999999999999999876

>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46

Probab=96.35  E-value=0.0015  Score=51.57  Aligned_cols=23  Identities=26%  Similarity=0.066  Sum_probs=20.5

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|+
T Consensus        54 ~~~vLDlGcGtG~~~~~~~~~~~   76 (201)
T 2ift_A           54 QSECLDGFAGSGSLGFEALSRQA   76 (201)
T ss_dssp             TCEEEETTCTTCHHHHHHHHTTC
T ss_pred             CCeEEEcCCccCHHHHHHHHccC
Confidence            45899999999999999888876

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=96.35  E-value=0.0016  Score=52.63  Aligned_cols=24  Identities=25%  Similarity=0.212  Sum_probs=21.0

Q ss_pred             CCCceeEeeccChHhHHHHHHCCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      +..+|||||||+|.++..|++.+.
T Consensus        46 ~~~~vLDiGcG~G~~~~~la~~~~   69 (267)
T 3kkz_A           46 EKSLIADIGCGTGGQTMVLAGHVT   69 (267)
T ss_dssp             TTCEEEEETCTTCHHHHHHHTTCS
T ss_pred             CCCEEEEeCCCCCHHHHHHHhccC
Confidence            356899999999999999999854

>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}

Probab=96.34  E-value=0.0017  Score=50.04  Aligned_cols=23  Identities=35%  Similarity=0.453  Sum_probs=20.7

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|.
T Consensus        33 ~~~vLdiG~G~G~~~~~l~~~~~   55 (230)
T 3cc8_A           33 WKEVLDIGCSSGALGAAIKENGT   55 (230)
T ss_dssp             CSEEEEETCTTSHHHHHHHTTTC
T ss_pred             CCcEEEeCCCCCHHHHHHHhcCC
Confidence            46899999999999999998874

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=96.34  E-value=0.0014  Score=49.11  Aligned_cols=23  Identities=26%  Similarity=0.414  Sum_probs=20.2

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|.
T Consensus        53 ~~~vLdiG~G~G~~~~~~~~~~~   75 (194)
T 1dus_A           53 DDDILDLGCGYGVIGIALADEVK   75 (194)
T ss_dssp             TCEEEEETCTTSHHHHHHGGGSS
T ss_pred             CCeEEEeCCCCCHHHHHHHHcCC
Confidence            56899999999999999998743

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.33  E-value=0.0017  Score=51.63  Aligned_cols=24  Identities=29%  Similarity=0.630  Sum_probs=20.5

Q ss_pred             CCCceeEeeccChHhHHHHHHC-CC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ-GY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~-GF  187 (193)
                      +..+|||||||+|.++..|++. |.
T Consensus        36 ~~~~VLDiGcG~G~~~~~la~~~~~   60 (256)
T 1nkv_A           36 PGTRILDLGSGSGEMLCTWARDHGI   60 (256)
T ss_dssp             TTCEEEEETCTTCHHHHHHHHHTCC
T ss_pred             CCCEEEEECCCCCHHHHHHHHhcCC
Confidence            3568999999999999999986 44

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.32  E-value=0.0016  Score=51.61  Aligned_cols=24  Identities=33%  Similarity=0.405  Sum_probs=20.9

Q ss_pred             CCCceeEeeccChHhHHHHHHC-CC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ-GY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~-GF  187 (193)
                      +..+|||||||+|.++..|++. |.
T Consensus        55 ~~~~vLdiG~G~G~~~~~l~~~~~~   79 (266)
T 3ujc_A           55 ENSKVLDIGSGLGGGCMYINEKYGA   79 (266)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCCCHHHHHHHHHcCC
Confidence            3568999999999999999987 54

>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*

Probab=96.31  E-value=0.0016  Score=54.38  Aligned_cols=22  Identities=36%  Similarity=0.471  Sum_probs=19.7

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.++..|++.+
T Consensus        35 ~~~VLDlGcG~G~~~~~l~~~~   56 (313)
T 3bgv_A           35 DITVLDLGCGKGGDLLKWKKGR   56 (313)
T ss_dssp             CCEEEEETCTTTTTHHHHHHTT
T ss_pred             CCEEEEECCCCcHHHHHHHhcC
Confidence            4689999999999999999864

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=96.28  E-value=0.0021  Score=51.14  Aligned_cols=23  Identities=30%  Similarity=0.332  Sum_probs=20.7

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|.
T Consensus        56 ~~~vLDlGcG~G~~~~~la~~~~   78 (204)
T 3njr_A           56 GELLWDIGGGSGSVSVEWCLAGG   78 (204)
T ss_dssp             TCEEEEETCTTCHHHHHHHHTTC
T ss_pred             CCEEEEecCCCCHHHHHHHHcCC
Confidence            56899999999999999999854

>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53

Probab=96.28  E-value=0.0021  Score=50.62  Aligned_cols=22  Identities=23%  Similarity=0.516  Sum_probs=19.6

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.++..|++..
T Consensus        42 ~~~vLDiGcG~G~~~~~la~~~   63 (214)
T 1yzh_A           42 NPIHVEVGSGKGAFVSGMAKQN   63 (214)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHC
T ss_pred             CCeEEEEccCcCHHHHHHHHHC
Confidence            4689999999999999999873

>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}

Probab=96.27  E-value=0.0011  Score=51.57  Aligned_cols=22  Identities=50%  Similarity=0.702  Sum_probs=20.1

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.++..|++.+
T Consensus        38 ~~~vLDiG~G~G~~~~~l~~~~   59 (219)
T 3dh0_A           38 GMTVLDVGTGAGFYLPYLSKMV   59 (219)
T ss_dssp             TCEEEESSCTTCTTHHHHHHHH
T ss_pred             CCEEEEEecCCCHHHHHHHHHh
Confidence            5689999999999999999876

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=96.26  E-value=0.0016  Score=52.36  Aligned_cols=23  Identities=26%  Similarity=0.328  Sum_probs=20.6

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.+.
T Consensus        38 ~~~vLDiGcG~G~~~~~l~~~~~   60 (260)
T 1vl5_A           38 NEEVLDVATGGGHVANAFAPFVK   60 (260)
T ss_dssp             CCEEEEETCTTCHHHHHHGGGSS
T ss_pred             CCEEEEEeCCCCHHHHHHHHhCC
Confidence            56899999999999999998864

>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*

Probab=96.26  E-value=0.0054  Score=50.69  Aligned_cols=15  Identities=33%  Similarity=0.545  Sum_probs=12.5

Q ss_pred             CCceeEeeccChHhH
Q 029423          165 SWSVLDIGTGNGLLL  179 (193)
Q Consensus       165 ~~sILDLGCGNG~LL  179 (193)
                      ..+|||||||+|.+.
T Consensus        53 ~~~VLDiG~GtG~~~   67 (292)
T 2aot_A           53 EIKILSIGGGAGEID   67 (292)
T ss_dssp             EEEEEEETCTTSHHH
T ss_pred             CCeEEEEcCCCCHHH
Confidence            468999999999643

>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}

Probab=96.25  E-value=0.0018  Score=50.89  Aligned_cols=22  Identities=36%  Similarity=0.594  Sum_probs=20.0

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||+|.++..|++.
T Consensus        44 ~~~~vLDiG~G~G~~~~~l~~~   65 (234)
T 3dtn_A           44 ENPDILDLGAGTGLLSAFLMEK   65 (234)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHH
T ss_pred             CCCeEEEecCCCCHHHHHHHHh
Confidence            3578999999999999999987

>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}

Probab=96.19  E-value=0.0025  Score=55.75  Aligned_cols=24  Identities=38%  Similarity=0.572  Sum_probs=21.9

Q ss_pred             CCCceeEeeccChHhHHHHHHCCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      +..+|||||||+|.++..|++.|.
T Consensus        63 ~~~~VLDlGcGtG~ls~~la~~g~   86 (376)
T 3r0q_C           63 EGKTVLDVGTGSGILAIWSAQAGA   86 (376)
T ss_dssp             TTCEEEEESCTTTHHHHHHHHTTC
T ss_pred             CCCEEEEeccCcCHHHHHHHhcCC
Confidence            356899999999999999999987

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=96.19  E-value=0.0022  Score=53.52  Aligned_cols=22  Identities=27%  Similarity=0.409  Sum_probs=19.9

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||+|.++..|++.
T Consensus        46 ~~~~VLDiGCG~G~~~~~la~~   67 (292)
T 3g07_A           46 RGRDVLDLGCNVGHLTLSIACK   67 (292)
T ss_dssp             TTSEEEEESCTTCHHHHHHHHH
T ss_pred             CCCcEEEeCCCCCHHHHHHHHH
Confidence            3568999999999999999987

>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46

Probab=96.18  E-value=0.0021  Score=50.78  Aligned_cols=23  Identities=26%  Similarity=0.099  Sum_probs=20.6

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|+
T Consensus        55 ~~~vLDlgcG~G~~~~~l~~~~~   77 (202)
T 2fpo_A           55 DAQCLDCFAGSGALGLEALSRYA   77 (202)
T ss_dssp             TCEEEETTCTTCHHHHHHHHTTC
T ss_pred             CCeEEEeCCCcCHHHHHHHhcCC
Confidence            45899999999999999888886

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.17  E-value=0.0021  Score=53.20  Aligned_cols=24  Identities=25%  Similarity=0.430  Sum_probs=21.1

Q ss_pred             CCCceeEeeccChHhHHHHHHC-CC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ-GY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~-GF  187 (193)
                      +..+|||||||+|.++..|++. |.
T Consensus        72 ~~~~vLDiGcG~G~~~~~la~~~~~   96 (302)
T 3hem_A           72 PGMTLLDIGCGWGSTMRHAVAEYDV   96 (302)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCC
T ss_pred             CcCEEEEeeccCcHHHHHHHHhCCC
Confidence            3568999999999999999987 74

>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}

Probab=96.16  E-value=0.0025  Score=51.39  Aligned_cols=22  Identities=36%  Similarity=0.524  Sum_probs=19.8

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||+|.++..|++.
T Consensus        43 ~~~~vLDiGcG~G~~~~~l~~~   64 (275)
T 3bkx_A           43 PGEKILEIGCGQGDLSAVLADQ   64 (275)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHH
T ss_pred             CCCEEEEeCCCCCHHHHHHHHH
Confidence            3568999999999999999987

>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}

Probab=96.15  E-value=0.0049  Score=47.68  Aligned_cols=18  Identities=39%  Similarity=0.741  Sum_probs=16.4

Q ss_pred             CCceeEeeccChHhHHHH
Q 029423          165 SWSVLDIGTGNGLLLQEL  182 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eL  182 (193)
                      ..+|||||||+|.++..|
T Consensus        37 ~~~vLdiG~G~G~~~~~l   54 (211)
T 2gs9_A           37 GESLLEVGAGTGYWLRRL   54 (211)
T ss_dssp             CSEEEEETCTTCHHHHHC
T ss_pred             CCeEEEECCCCCHhHHhC
Confidence            468999999999999888

>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*

Probab=96.14  E-value=0.00076  Score=56.99  Aligned_cols=21  Identities=38%  Similarity=0.473  Sum_probs=19.2

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus       124 ~~~vLDlG~GsG~~~~~la~~  144 (284)
T 1nv8_A          124 IKTVADIGTGSGAIGVSVAKF  144 (284)
T ss_dssp             CCEEEEESCTTSHHHHHHHHH
T ss_pred             CCEEEEEeCchhHHHHHHHHC
Confidence            358999999999999999987

>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*

Probab=96.14  E-value=0.0026  Score=55.02  Aligned_cols=24  Identities=38%  Similarity=0.567  Sum_probs=21.6

Q ss_pred             CCCceeEeeccChHhHHHHHHCCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      +..+|||||||+|.++..|++.|.
T Consensus        66 ~~~~VLDvGcG~G~~~~~la~~g~   89 (349)
T 3q7e_A           66 KDKVVLDVGSGTGILCMFAAKAGA   89 (349)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHTTC
T ss_pred             CCCEEEEEeccchHHHHHHHHCCC
Confidence            356899999999999999999986

>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*

Probab=96.10  E-value=0.0028  Score=54.69  Aligned_cols=24  Identities=38%  Similarity=0.531  Sum_probs=21.5

Q ss_pred             CCCceeEeeccChHhHHHHHHCCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      +..+|||||||+|.++..|++.|.
T Consensus        64 ~~~~VLDiGcGtG~ls~~la~~g~   87 (340)
T 2fyt_A           64 KDKVVLDVGCGTGILSMFAAKAGA   87 (340)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHTTC
T ss_pred             CCCEEEEeeccCcHHHHHHHHcCC
Confidence            356899999999999999999985

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=96.06  E-value=0.0032  Score=49.97  Aligned_cols=21  Identities=24%  Similarity=0.348  Sum_probs=19.4

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        34 ~~~vLdiG~G~G~~~~~l~~~   54 (259)
T 2p35_A           34 VLNGYDLGCGPGNSTELLTDR   54 (259)
T ss_dssp             CSSEEEETCTTTHHHHHHHHH
T ss_pred             CCEEEEecCcCCHHHHHHHHh
Confidence            568999999999999999987

>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A

Probab=96.04  E-value=0.0041  Score=50.15  Aligned_cols=21  Identities=29%  Similarity=0.333  Sum_probs=19.1

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||+|||+|.++..|++.
T Consensus        52 ~~~vLD~gcGsG~~~~~la~~   72 (250)
T 1o9g_A           52 PVTLWDPCCGSGYLLTVLGLL   72 (250)
T ss_dssp             CEEEEETTCTTSHHHHHHHHH
T ss_pred             CCeEEECCCCCCHHHHHHHHH
Confidence            468999999999999999976

>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*

Probab=96.04  E-value=0.0029  Score=54.96  Aligned_cols=25  Identities=20%  Similarity=0.538  Sum_probs=22.3

Q ss_pred             CCCceeEeeccChHhHHHHHHCCCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      +..+|||||||+|.++..|++.|+.
T Consensus       107 ~~~~VLDiGcG~G~~~~~l~~~g~~  131 (416)
T 4e2x_A          107 PDPFIVEIGCNDGIMLRTIQEAGVR  131 (416)
T ss_dssp             SSCEEEEETCTTTTTHHHHHHTTCE
T ss_pred             CCCEEEEecCCCCHHHHHHHHcCCc
Confidence            3568999999999999999999874

>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}

Probab=96.03  E-value=0.0023  Score=52.15  Aligned_cols=23  Identities=26%  Similarity=0.430  Sum_probs=20.8

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.+.
T Consensus        50 ~~~vLDlG~G~G~~~~~la~~~~   72 (259)
T 3lpm_A           50 KGKIIDLCSGNGIIPLLLSTRTK   72 (259)
T ss_dssp             CCEEEETTCTTTHHHHHHHTTCC
T ss_pred             CCEEEEcCCchhHHHHHHHHhcC
Confidence            56899999999999999999865

>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}

Probab=96.02  E-value=0.0025  Score=54.32  Aligned_cols=22  Identities=32%  Similarity=0.299  Sum_probs=18.6

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.++..+++.|
T Consensus        49 ~~~VLDlGCG~G~~l~~~~~~~   70 (302)
T 2vdw_A           49 KRKVLAIDFGNGADLEKYFYGE   70 (302)
T ss_dssp             CCEEEETTCTTTTTHHHHHHTT
T ss_pred             CCeEEEEecCCcHhHHHHHhcC
Confidence            5689999999998888777765

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=95.95  E-value=0.0032  Score=52.59  Aligned_cols=25  Identities=20%  Similarity=0.327  Sum_probs=21.4

Q ss_pred             CCCceeEeeccChHhHHHHHHC-CCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ-GYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~-GFs  188 (193)
                      +..+|||||||+|.++..|++. |..
T Consensus       117 ~~~~vLDiGcG~G~~~~~la~~~~~~  142 (312)
T 3vc1_A          117 PDDTLVDAGCGRGGSMVMAHRRFGSR  142 (312)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHCCE
T ss_pred             CCCEEEEecCCCCHHHHHHHHHcCCE
Confidence            3568999999999999999987 643

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=95.93  E-value=0.0035  Score=52.11  Aligned_cols=25  Identities=24%  Similarity=0.449  Sum_probs=21.5

Q ss_pred             CCCceeEeeccChHhHHHHHHC-CCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ-GYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~-GFs  188 (193)
                      +..+|||||||+|.++..|++. |..
T Consensus        90 ~~~~vLDiGcG~G~~~~~la~~~~~~  115 (318)
T 2fk8_A           90 PGMTLLDIGCGWGTTMRRAVERFDVN  115 (318)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHCCE
T ss_pred             CcCEEEEEcccchHHHHHHHHHCCCE
Confidence            3568999999999999999987 753

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=95.92  E-value=0.0038  Score=49.90  Aligned_cols=21  Identities=14%  Similarity=0.248  Sum_probs=19.3

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        75 ~~~VLDlGcG~G~~~~~la~~   95 (230)
T 1fbn_A           75 DSKILYLGASAGTTPSHVADI   95 (230)
T ss_dssp             TCEEEEESCCSSHHHHHHHHH
T ss_pred             CCEEEEEcccCCHHHHHHHHH
Confidence            568999999999999999987

>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A

Probab=95.91  E-value=0.0039  Score=53.77  Aligned_cols=24  Identities=33%  Similarity=0.480  Sum_probs=21.4

Q ss_pred             CCCceeEeeccChHhHHHHHHCCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      +..+|||||||+|.++..|++.|.
T Consensus        50 ~~~~VLDiGcGtG~ls~~la~~g~   73 (348)
T 2y1w_A           50 KDKIVLDVGCGSGILSFFAAQAGA   73 (348)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHTTC
T ss_pred             CcCEEEEcCCCccHHHHHHHhCCC
Confidence            356899999999999999999875

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=95.89  E-value=0.0039  Score=50.17  Aligned_cols=21  Identities=33%  Similarity=0.398  Sum_probs=19.1

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        62 ~~~vLDiGcG~G~~~~~l~~~   82 (273)
T 3bus_A           62 GDRVLDVGCGIGKPAVRLATA   82 (273)
T ss_dssp             TCEEEEESCTTSHHHHHHHHH
T ss_pred             CCEEEEeCCCCCHHHHHHHHh
Confidence            568999999999999999985

>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6

Probab=95.88  E-value=0.004  Score=53.29  Aligned_cols=23  Identities=39%  Similarity=0.562  Sum_probs=21.0

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|.
T Consensus        39 ~~~VLDiGcGtG~ls~~la~~g~   61 (328)
T 1g6q_1           39 DKIVLDVGCGTGILSMFAAKHGA   61 (328)
T ss_dssp             TCEEEEETCTTSHHHHHHHHTCC
T ss_pred             CCEEEEecCccHHHHHHHHHCCC
Confidence            45899999999999999999886

>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20

Probab=95.87  E-value=0.0035  Score=48.37  Aligned_cols=21  Identities=38%  Similarity=0.406  Sum_probs=19.0

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        66 ~~~vLDiG~G~G~~~~~l~~~   86 (207)
T 1jsx_A           66 GERFIDVGTGPGLPGIPLSIV   86 (207)
T ss_dssp             SSEEEEETCTTTTTHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHH
Confidence            458999999999999999986

>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}

Probab=95.78  E-value=0.0034  Score=50.72  Aligned_cols=23  Identities=30%  Similarity=0.352  Sum_probs=20.4

Q ss_pred             CCCceeEeeccChHhHHHHHHCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~G  186 (193)
                      +..+|||||||+|.++..|++.+
T Consensus        37 ~~~~vLDiG~G~G~~~~~l~~~~   59 (276)
T 3mgg_A           37 PGAKVLEAGCGIGAQTVILAKNN   59 (276)
T ss_dssp             TTCEEEETTCTTSHHHHHHHHHC
T ss_pred             CCCeEEEecCCCCHHHHHHHHhC
Confidence            35689999999999999999883

>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}

Probab=95.75  E-value=0.0049  Score=49.06  Aligned_cols=21  Identities=24%  Similarity=0.349  Sum_probs=19.2

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        78 ~~~vLDlG~G~G~~~~~la~~   98 (233)
T 2ipx_A           78 GAKVLYLGAASGTTVSHVSDI   98 (233)
T ss_dssp             TCEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEEcccCCHHHHHHHHH
Confidence            568999999999999999986

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=95.72  E-value=0.0047  Score=50.32  Aligned_cols=24  Identities=25%  Similarity=0.399  Sum_probs=20.1

Q ss_pred             CCCceeEeeccChHhHHHHH-HCCC
Q 029423          164 SSWSVLDIGTGNGLLLQELS-KQGY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLa-k~GF  187 (193)
                      +..+|||||||+|.++..|+ +.|.
T Consensus        64 ~~~~vLDiGcG~G~~~~~l~~~~~~   88 (287)
T 1kpg_A           64 PGMTLLDVGCGWGATMMRAVEKYDV   88 (287)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCC
T ss_pred             CcCEEEEECCcccHHHHHHHHHcCC
Confidence            35689999999999999999 4465

>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}

Probab=95.71  E-value=0.0041  Score=53.27  Aligned_cols=23  Identities=30%  Similarity=0.535  Sum_probs=20.6

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|.
T Consensus       197 ~~~VLDlGcG~G~~~~~la~~~~  219 (343)
T 2pjd_A          197 KGKVLDVGCGAGVLSVAFARHSP  219 (343)
T ss_dssp             CSBCCBTTCTTSHHHHHHHHHCT
T ss_pred             CCeEEEecCccCHHHHHHHHHCC
Confidence            45899999999999999999874

>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45

Probab=95.70  E-value=0.015  Score=49.70  Aligned_cols=69  Identities=17%  Similarity=0.156  Sum_probs=41.0

Q ss_pred             cHHHHHHHHhhhhhhhccCC-CCCceecCCchHHHHHHHHHhhhhhhccCcccccccccCCCccccccccCCCCceeEee
Q 029423           94 LQSYWDSAYADELANFREHG-HAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIG  172 (193)
Q Consensus        94 tkeYWD~~Y~~EL~NF~e~g-D~GEiWFGed~~d~vv~Wlk~~~~~i~q~~ip~~~d~~~~e~~e~~~k~~~~~sILDLG  172 (193)
                      ..+.|-..|+.-+..|...+ ..|+ .|......+++..+...   +..   +                 .+..+|||+|
T Consensus        83 ~~~~~g~~ye~~~~~~~~~~~~~g~-~~TP~~i~~~~~~ll~~---l~~---~-----------------~~~~~VlDp~  138 (344)
T 2f8l_A           83 SNEEIRKGLQLALLKGMKHGIQVNH-QMTPDSIGFIVAYLLEK---VIQ---K-----------------KKNVSILDPA  138 (344)
T ss_dssp             CHHHHHHHHHHHHHHHTSSSCCGGG-CCCCHHHHHHHHHHHHH---HHT---T-----------------CSEEEEEETT
T ss_pred             ChhHHHHHHHHHHHHHhhcccccCc-CCChHHHHHHHHHHHHH---hcC---C-----------------CCCCEEEeCC
Confidence            35678889988777776432 3343 56554332222222111   100   0                 1245899999


Q ss_pred             ccChHhHHHHHHCC
Q 029423          173 TGNGLLLQELSKQG  186 (193)
Q Consensus       173 CGNG~LL~eLak~G  186 (193)
                      ||+|.|+..+++..
T Consensus       139 cGsG~~l~~~~~~~  152 (344)
T 2f8l_A          139 CGTANLLTTVINQL  152 (344)
T ss_dssp             CTTSHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHH
Confidence            99999999998753

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=95.68  E-value=0.0049  Score=48.60  Aligned_cols=21  Identities=29%  Similarity=0.317  Sum_probs=19.1

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        74 ~~~vLDlG~G~G~~~~~la~~   94 (227)
T 1g8a_A           74 GKSVLYLGIASGTTASHVSDI   94 (227)
T ss_dssp             TCEEEEETTTSTTHHHHHHHH
T ss_pred             CCEEEEEeccCCHHHHHHHHH
Confidence            568999999999999999976

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=95.66  E-value=0.0054  Score=48.17  Aligned_cols=21  Identities=29%  Similarity=0.367  Sum_probs=19.5

Q ss_pred             CCceeEeecc-ChHhHHHHHHC
Q 029423          165 SWSVLDIGTG-NGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCG-NG~LL~eLak~  185 (193)
                      ..+||||||| +|.++..|++.
T Consensus        56 ~~~vLDlG~G~~G~~~~~la~~   77 (230)
T 3evz_A           56 GEVALEIGTGHTAMMALMAEKF   77 (230)
T ss_dssp             SCEEEEECCTTTCHHHHHHHHH
T ss_pred             CCEEEEcCCCHHHHHHHHHHHh
Confidence            5689999999 99999999987

>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*

Probab=95.66  E-value=0.0042  Score=55.13  Aligned_cols=25  Identities=36%  Similarity=0.577  Sum_probs=22.0

Q ss_pred             CCCceeEeeccChHhHHHHHHCCCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      +..+|||||||+|.++..|++.|..
T Consensus       233 ~~~~VLDlGcG~G~~~~~la~~g~~  257 (381)
T 3dmg_A          233 RGRQVLDLGAGYGALTLPLARMGAE  257 (381)
T ss_dssp             TTCEEEEETCTTSTTHHHHHHTTCE
T ss_pred             CCCEEEEEeeeCCHHHHHHHHcCCE
Confidence            3568999999999999999999764

>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}

Probab=95.65  E-value=0.0057  Score=51.97  Aligned_cols=23  Identities=39%  Similarity=0.387  Sum_probs=20.5

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.+...|++.|.
T Consensus        43 ~~~VLDiG~G~G~lt~~La~~~~   65 (299)
T 2h1r_A           43 SDIVLEIGCGTGNLTVKLLPLAK   65 (299)
T ss_dssp             TCEEEEECCTTSTTHHHHTTTSS
T ss_pred             cCEEEEEcCcCcHHHHHHHhcCC
Confidence            46899999999999999998864

>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20

Probab=95.65  E-value=0.0042  Score=49.91  Aligned_cols=21  Identities=19%  Similarity=0.324  Sum_probs=18.5

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        71 ~~~vLDiG~G~G~~~~~la~~   91 (240)
T 1xdz_A           71 VNTICDVGAGAGFPSLPIKIC   91 (240)
T ss_dssp             CCEEEEECSSSCTTHHHHHHH
T ss_pred             CCEEEEecCCCCHHHHHHHHh
Confidence            468999999999999999953

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=95.64  E-value=0.0052  Score=49.54  Aligned_cols=21  Identities=33%  Similarity=0.609  Sum_probs=19.4

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        86 ~~~vLdiG~G~G~~~~~l~~~  106 (269)
T 1p91_A           86 ATAVLDIGCGEGYYTHAFADA  106 (269)
T ss_dssp             CCEEEEETCTTSTTHHHHHHT
T ss_pred             CCEEEEECCCCCHHHHHHHHh
Confidence            468999999999999999987

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=95.58  E-value=0.0056  Score=48.14  Aligned_cols=22  Identities=23%  Similarity=0.422  Sum_probs=19.8

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.+...|++.+
T Consensus        81 ~~~VLdiG~G~G~~~~~la~~~  102 (227)
T 2pbf_A           81 GSRAIDVGSGSGYLTVCMAIKM  102 (227)
T ss_dssp             TCEEEEESCTTSHHHHHHHHHT
T ss_pred             CCEEEEECCCCCHHHHHHHHHh
Confidence            4689999999999999999874

>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}

Probab=95.56  E-value=0.0057  Score=54.80  Aligned_cols=25  Identities=32%  Similarity=0.512  Sum_probs=21.6

Q ss_pred             CCCceeEeeccChHhHHHHHHCCCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      +...|||||||.|.|..-.++.|-.
T Consensus        83 ~~k~VLDvG~GtGiLs~~Aa~aGA~  107 (376)
T 4hc4_A           83 RGKTVLDVGAGTGILSIFCAQAGAR  107 (376)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHTTCS
T ss_pred             CCCEEEEeCCCccHHHHHHHHhCCC
Confidence            3568999999999999999999853

>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*

Probab=95.55  E-value=0.0042  Score=51.84  Aligned_cols=22  Identities=27%  Similarity=0.468  Sum_probs=20.2

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||.|.|...|++.|
T Consensus        32 ~~~VLDiG~G~G~lt~~L~~~~   53 (249)
T 3ftd_A           32 GNTVVEVGGGTGNLTKVLLQHP   53 (249)
T ss_dssp             TCEEEEEESCHHHHHHHHTTSC
T ss_pred             cCEEEEEcCchHHHHHHHHHcC
Confidence            5689999999999999999986

>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}

Probab=95.48  E-value=0.0049  Score=51.79  Aligned_cols=25  Identities=28%  Similarity=0.193  Sum_probs=21.8

Q ss_pred             CCceeEeeccChHhHHHHHHCCCcc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYTL  189 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs~  189 (193)
                      ..+|||+|||+|.+.+.|++.|...
T Consensus        84 ~~~VLDlgcG~G~~a~~lA~~g~~V  108 (258)
T 2r6z_A           84 HPTVWDATAGLGRDSFVLASLGLTV  108 (258)
T ss_dssp             CCCEEETTCTTCHHHHHHHHTTCCE
T ss_pred             cCeEEEeeCccCHHHHHHHHhCCEE
Confidence            4589999999999999999987643

>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*

Probab=95.48  E-value=0.0072  Score=51.55  Aligned_cols=23  Identities=30%  Similarity=0.590  Sum_probs=20.9

Q ss_pred             CCCceeEeeccChHhHHHHHHCCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      +. +|||||||.|.|...|++.|.
T Consensus        47 ~~-~VLEIG~G~G~lt~~L~~~~~   69 (271)
T 3fut_A           47 TG-PVFEVGPGLGALTRALLEAGA   69 (271)
T ss_dssp             CS-CEEEECCTTSHHHHHHHHTTC
T ss_pred             CC-eEEEEeCchHHHHHHHHHcCC
Confidence            35 899999999999999999984

>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}

Probab=95.44  E-value=0.0053  Score=50.60  Aligned_cols=22  Identities=18%  Similarity=0.323  Sum_probs=19.6

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.++..|++.+
T Consensus        37 ~~~VLDlG~G~G~~~l~la~~~   58 (260)
T 2ozv_A           37 ACRIADLGAGAGAAGMAVAARL   58 (260)
T ss_dssp             CEEEEECCSSSSHHHHHHHHHC
T ss_pred             CCEEEEeCChHhHHHHHHHHhC
Confidence            4589999999999999999874

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=95.41  E-value=0.0071  Score=48.38  Aligned_cols=22  Identities=23%  Similarity=0.309  Sum_probs=19.9

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||+|||+|.++..|++.
T Consensus        93 ~~~~vldiG~G~G~~~~~l~~~  114 (255)
T 3mb5_A           93 PGDFIVEAGVGSGALTLFLANI  114 (255)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHH
Confidence            3568999999999999999987

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=95.38  E-value=0.0076  Score=47.32  Aligned_cols=21  Identities=29%  Similarity=0.605  Sum_probs=19.2

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.+...|++.
T Consensus        78 ~~~vLDiG~G~G~~~~~la~~   98 (226)
T 1i1n_A           78 GAKALDVGSGSGILTACFARM   98 (226)
T ss_dssp             TCEEEEETCTTSHHHHHHHHH
T ss_pred             CCEEEEEcCCcCHHHHHHHHH
Confidence            568999999999999999986

>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54

Probab=95.35  E-value=0.0077  Score=48.39  Aligned_cols=21  Identities=29%  Similarity=0.357  Sum_probs=18.6

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        66 ~~~vLDlG~G~G~~~~~la~~   86 (254)
T 2h00_A           66 LRRGIDIGTGASCIYPLLGAT   86 (254)
T ss_dssp             CCEEEEESCTTTTHHHHHHHH
T ss_pred             CCEEEEeCCChhHHHHHHHHh
Confidence            468999999999999998875

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=95.33  E-value=0.013  Score=54.24  Aligned_cols=24  Identities=17%  Similarity=0.369  Sum_probs=20.2

Q ss_pred             CCCceeEeeccChHhHHHHHHC-CC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ-GY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~-GF  187 (193)
                      +..+|||||||+|.+++.|++. |.
T Consensus       173 ~gd~VLDLGCGtG~l~l~lA~~~g~  197 (438)
T 3uwp_A          173 DDDLFVDLGSGVGQVVLQVAAATNC  197 (438)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHCCC
T ss_pred             CCCEEEEeCCCCCHHHHHHHHHCCC
Confidence            3568999999999999999864 54

>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}

Probab=95.32  E-value=0.0082  Score=52.15  Aligned_cols=23  Identities=22%  Similarity=0.385  Sum_probs=20.9

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.|...|++.|.
T Consensus        86 g~~vLDiGcGTG~~t~~L~~~ga  108 (291)
T 3hp7_A           86 DMITIDIGASTGGFTDVMLQNGA  108 (291)
T ss_dssp             TCEEEEETCTTSHHHHHHHHTTC
T ss_pred             ccEEEecCCCccHHHHHHHhCCC
Confidence            56899999999999999999875

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=95.27  E-value=0.0091  Score=47.42  Aligned_cols=22  Identities=36%  Similarity=0.493  Sum_probs=19.8

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||+|||+|.++..|++.
T Consensus        96 ~~~~vLdiG~G~G~~~~~l~~~  117 (258)
T 2pwy_A           96 PGMRVLEAGTGSGGLTLFLARA  117 (258)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEECCCcCHHHHHHHHH
Confidence            3568999999999999999987

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=95.27  E-value=0.009  Score=47.32  Aligned_cols=21  Identities=29%  Similarity=0.545  Sum_probs=18.8

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.+...|++.
T Consensus        85 ~~~VLdiG~G~G~~~~~la~~  105 (227)
T 1r18_A           85 GARILDVGSGSGYLTACFYRY  105 (227)
T ss_dssp             TCEEEEESCTTSHHHHHHHHH
T ss_pred             CCEEEEECCCccHHHHHHHHh
Confidence            568999999999999999873

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=95.25  E-value=0.0077  Score=49.74  Aligned_cols=21  Identities=38%  Similarity=0.479  Sum_probs=19.1

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        81 ~~~vLDiG~G~G~~~i~la~~  101 (249)
T 3g89_A           81 PLRVLDLGTGAGFPGLPLKIV  101 (249)
T ss_dssp             SCEEEEETCTTTTTHHHHHHH
T ss_pred             CCEEEEEcCCCCHHHHHHHHH
Confidence            568999999999999999976

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=95.24  E-value=0.0065  Score=49.27  Aligned_cols=23  Identities=17%  Similarity=0.320  Sum_probs=19.6

Q ss_pred             CCCceeEeeccChHhHHHHHHCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~G  186 (193)
                      +..+|||||||.|.+...|++.+
T Consensus        60 ~G~rVLdiG~G~G~~~~~~~~~~   82 (236)
T 3orh_A           60 KGGRVLEVGFGMAIAASKVQEAP   82 (236)
T ss_dssp             TCEEEEEECCTTSHHHHHHTTSC
T ss_pred             CCCeEEEECCCccHHHHHHHHhC
Confidence            35689999999999999998763

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=95.24  E-value=0.0063  Score=51.46  Aligned_cols=23  Identities=30%  Similarity=0.365  Sum_probs=20.6

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||.|.++..|++.+.
T Consensus        76 ~~~VLDiGcG~G~~~~~la~~~~   98 (317)
T 1dl5_A           76 GMRVLEIGGGTGYNAAVMSRVVG   98 (317)
T ss_dssp             TCEEEEECCTTSHHHHHHHHHHC
T ss_pred             cCEEEEecCCchHHHHHHHHhcC
Confidence            56899999999999999998764

>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*

Probab=95.20  E-value=0.0089  Score=51.44  Aligned_cols=21  Identities=19%  Similarity=0.319  Sum_probs=18.7

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||+|||+|.|+..|++.
T Consensus        40 ~~~vLD~gcGtG~~~~~~~~~   60 (421)
T 2ih2_A           40 GGRVLEPACAHGPFLRAFREA   60 (421)
T ss_dssp             TCEEEEETCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCChHHHHHHHHH
Confidence            348999999999999999974

>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*

Probab=95.19  E-value=0.007  Score=50.47  Aligned_cols=24  Identities=25%  Similarity=0.221  Sum_probs=21.7

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||+|||+|.++..|++.|..
T Consensus       126 ~~~VLDlgcG~G~~~~~la~~~~~  149 (278)
T 2frn_A          126 DELVVDMFAGIGHLSLPIAVYGKA  149 (278)
T ss_dssp             TCEEEETTCTTTTTHHHHHHHTCC
T ss_pred             CCEEEEecccCCHHHHHHHHhCCC
Confidence            468999999999999999998874

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=95.18  E-value=0.0099  Score=48.18  Aligned_cols=22  Identities=32%  Similarity=0.487  Sum_probs=19.5

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||+|.++..|++.
T Consensus        99 ~~~~vLdiG~G~G~~~~~l~~~  120 (280)
T 1i9g_A           99 PGARVLEAGAGSGALTLSLLRA  120 (280)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEEcccccHHHHHHHHH
Confidence            3568999999999999999985

>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}

Probab=95.17  E-value=0.0061  Score=52.06  Aligned_cols=24  Identities=25%  Similarity=0.278  Sum_probs=21.2

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||.|.|...|++.+..
T Consensus        43 ~~~VLEIG~G~G~lt~~La~~~~~   66 (279)
T 3uzu_A           43 GERMVEIGPGLGALTGPVIARLAT   66 (279)
T ss_dssp             TCEEEEECCTTSTTHHHHHHHHCB
T ss_pred             cCEEEEEccccHHHHHHHHHhCCC
Confidence            568999999999999999998654

>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}

Probab=95.16  E-value=0.0086  Score=52.82  Aligned_cols=22  Identities=27%  Similarity=0.527  Sum_probs=20.0

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.++..|++.+
T Consensus       223 ~~~VLDlGcG~G~~s~~la~~~  244 (375)
T 4dcm_A          223 EGEIVDLGCGNGVIGLTLLDKN  244 (375)
T ss_dssp             CSEEEEETCTTCHHHHHHHHHC
T ss_pred             CCeEEEEeCcchHHHHHHHHHC
Confidence            3689999999999999999984

>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}

Probab=95.15  E-value=0.0098  Score=47.74  Aligned_cols=21  Identities=24%  Similarity=0.341  Sum_probs=19.0

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        72 ~~~vLDiG~G~G~~~~~la~~   92 (232)
T 3ntv_A           72 VKNILEIGTAIGYSSMQFASI   92 (232)
T ss_dssp             CCEEEEECCSSSHHHHHHHTT
T ss_pred             CCEEEEEeCchhHHHHHHHHh
Confidence            458999999999999999984

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=95.09  E-value=0.01  Score=46.49  Aligned_cols=21  Identities=29%  Similarity=0.308  Sum_probs=19.1

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.+...|++.
T Consensus        65 ~~~vLdiG~G~G~~~~~la~~   85 (225)
T 3tr6_A           65 AKKVIDIGTFTGYSAIAMGLA   85 (225)
T ss_dssp             CSEEEEECCTTSHHHHHHHTT
T ss_pred             CCEEEEeCCcchHHHHHHHHh
Confidence            458999999999999999986

>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*

Probab=95.00  E-value=0.0093  Score=50.66  Aligned_cols=22  Identities=27%  Similarity=0.323  Sum_probs=19.8

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||.|.+++.|++.
T Consensus        82 ~g~~VLDlGcGtG~~s~~la~~  103 (276)
T 2wa2_A           82 LKGTVVDLGCGRGSWSYYAASQ  103 (276)
T ss_dssp             CCEEEEEESCTTCHHHHHHHTS
T ss_pred             CCCEEEEeccCCCHHHHHHHHc
Confidence            3568999999999999999987

>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*

Probab=94.97  E-value=0.011  Score=50.10  Aligned_cols=23  Identities=26%  Similarity=0.488  Sum_probs=20.4

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.+.
T Consensus       184 ~~~vLDvG~G~G~~~~~l~~~~~  206 (360)
T 1tw3_A          184 VRHVLDVGGGKGGFAAAIARRAP  206 (360)
T ss_dssp             CSEEEEETCTTSHHHHHHHHHCT
T ss_pred             CcEEEEeCCcCcHHHHHHHHhCC
Confidence            46899999999999999998753

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=94.95  E-value=0.013  Score=46.27  Aligned_cols=23  Identities=43%  Similarity=0.609  Sum_probs=20.1

Q ss_pred             CCCceeEeeccChHhHHHHHHCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~G  186 (193)
                      +..+|||||||+|.++..|++.+
T Consensus        91 ~~~~vldiG~G~G~~~~~l~~~~  113 (248)
T 2yvl_A           91 KEKRVLEFGTGSGALLAVLSEVA  113 (248)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHS
T ss_pred             CCCEEEEeCCCccHHHHHHHHhC
Confidence            35689999999999999999873

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=94.94  E-value=0.012  Score=46.15  Aligned_cols=21  Identities=29%  Similarity=0.368  Sum_probs=19.3

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        59 ~~~vLdiG~G~G~~~~~la~~   79 (223)
T 3duw_A           59 ARNILEIGTLGGYSTIWLARG   79 (223)
T ss_dssp             CSEEEEECCTTSHHHHHHHTT
T ss_pred             CCEEEEecCCccHHHHHHHHh
Confidence            468999999999999999986

>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*

Probab=94.93  E-value=0.011  Score=50.17  Aligned_cols=22  Identities=36%  Similarity=0.620  Sum_probs=19.9

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.++..|++..
T Consensus       183 ~~~vlDvG~G~G~~~~~l~~~~  204 (374)
T 1qzz_A          183 VRHVLDVGGGNGGMLAAIALRA  204 (374)
T ss_dssp             CCEEEEETCTTSHHHHHHHHHC
T ss_pred             CCEEEEECCCcCHHHHHHHHHC
Confidence            5689999999999999999874

>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...

Probab=94.92  E-value=0.0047  Score=50.72  Aligned_cols=20  Identities=20%  Similarity=0.307  Sum_probs=15.6

Q ss_pred             CCceeEeeccChHhHHHHHH
Q 029423          165 SWSVLDIGTGNGLLLQELSK  184 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak  184 (193)
                      ..+|||||||+|.+...++.
T Consensus        72 ~~~vLDiGcG~G~~~~l~~~   91 (289)
T 2g72_A           72 GRTLIDIGSGPTVYQLLSAC   91 (289)
T ss_dssp             CSEEEEETCTTCCGGGTTGG
T ss_pred             CCeEEEECCCcChHHHHhhc
Confidence            56899999999996654544

>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*

Probab=94.90  E-value=0.01  Score=50.95  Aligned_cols=22  Identities=23%  Similarity=0.185  Sum_probs=19.9

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||.|.+++.|++.|
T Consensus        83 g~~VLDlGcG~G~~s~~la~~~  104 (305)
T 2p41_A           83 EGKVVDLGCGRGGWSYYCGGLK  104 (305)
T ss_dssp             CEEEEEETCTTSHHHHHHHTST
T ss_pred             CCEEEEEcCCCCHHHHHHHhcC
Confidence            4689999999999999999883

>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}

Probab=94.88  E-value=0.011  Score=49.94  Aligned_cols=22  Identities=23%  Similarity=0.265  Sum_probs=19.7

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||.|.+++.|++.
T Consensus        74 ~g~~VLDlGcGtG~~s~~la~~   95 (265)
T 2oxt_A           74 LTGRVVDLGCGRGGWSYYAASR   95 (265)
T ss_dssp             CCEEEEEESCTTSHHHHHHHTS
T ss_pred             CCCEEEEeCcCCCHHHHHHHHc
Confidence            3568999999999999999987

>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*

Probab=94.79  E-value=0.013  Score=50.71  Aligned_cols=23  Identities=43%  Similarity=0.666  Sum_probs=20.6

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||.|.|...|++.|.
T Consensus        51 ~~~VLEIG~G~G~lT~~La~~~~   73 (295)
T 3gru_A           51 DDVVLEIGLGKGILTEELAKNAK   73 (295)
T ss_dssp             TCEEEEECCTTSHHHHHHHHHSS
T ss_pred             cCEEEEECCCchHHHHHHHhcCC
Confidence            56899999999999999999864

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=94.78  E-value=0.014  Score=46.59  Aligned_cols=21  Identities=19%  Similarity=0.243  Sum_probs=19.1

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        61 ~~~VLdiG~G~G~~~~~la~~   81 (239)
T 2hnk_A           61 AKRIIEIGTFTGYSSLCFASA   81 (239)
T ss_dssp             CSEEEEECCTTCHHHHHHHHH
T ss_pred             cCEEEEEeCCCCHHHHHHHHh
Confidence            458999999999999999986

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=94.77  E-value=0.015  Score=46.08  Aligned_cols=21  Identities=24%  Similarity=0.385  Sum_probs=19.1

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        55 ~~~vLdiG~G~G~~~~~la~~   75 (233)
T 2gpy_A           55 PARILEIGTAIGYSAIRMAQA   75 (233)
T ss_dssp             CSEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEecCCCcHHHHHHHHH
Confidence            458999999999999999987

>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}

Probab=94.76  E-value=0.032  Score=45.32  Aligned_cols=25  Identities=20%  Similarity=0.299  Sum_probs=21.7

Q ss_pred             CCceeEeeccCh-HhHHHHHH-CCCcc
Q 029423          165 SWSVLDIGTGNG-LLLQELSK-QGYTL  189 (193)
Q Consensus       165 ~~sILDLGCGNG-~LL~eLak-~GFs~  189 (193)
                      ..+||+||||+| .....|++ .||..
T Consensus        36 ~~rVlEVG~G~g~~vA~~La~~~g~~V   62 (153)
T 2k4m_A           36 GTRVVEVGAGRFLYVSDYIRKHSKVDL   62 (153)
T ss_dssp             SSEEEEETCTTCCHHHHHHHHHSCCEE
T ss_pred             CCcEEEEccCCChHHHHHHHHhCCCeE
Confidence            358999999999 69999997 99954

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=94.74  E-value=0.014  Score=47.82  Aligned_cols=22  Identities=23%  Similarity=0.478  Sum_probs=19.7

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||+|.++..|++.
T Consensus       112 ~~~~VLDiG~G~G~~~~~la~~  133 (277)
T 1o54_A          112 EGDRIIDTGVGSGAMCAVLARA  133 (277)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEECCcCCHHHHHHHHH
Confidence            3568999999999999999987

>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A

Probab=94.73  E-value=0.013  Score=50.82  Aligned_cols=22  Identities=36%  Similarity=0.409  Sum_probs=19.6

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||+|.++..|++.
T Consensus        83 ~~~~VLDlGcG~G~~~~~la~~  104 (383)
T 4fsd_A           83 EGATVLDLGCGTGRDVYLASKL  104 (383)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHH
T ss_pred             CCCEEEEecCccCHHHHHHHHH
Confidence            4678999999999999999885

>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31

Probab=94.72  E-value=0.014  Score=53.33  Aligned_cols=21  Identities=19%  Similarity=0.370  Sum_probs=19.3

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||.|.++..|++.
T Consensus       243 g~~VLDLGCGsG~la~~LA~~  263 (433)
T 1u2z_A          243 GDTFMDLGSGVGNCVVQAALE  263 (433)
T ss_dssp             TCEEEEESCTTSHHHHHHHHH
T ss_pred             CCEEEEeCCCcCHHHHHHHHH
Confidence            568999999999999999985

>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*

Probab=94.71  E-value=0.015  Score=47.36  Aligned_cols=20  Identities=20%  Similarity=0.285  Sum_probs=18.5

Q ss_pred             CceeEeeccChHhHHHHHHC
Q 029423          166 WSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~  185 (193)
                      .+|||||||+|.++..|++.
T Consensus        83 ~~VLDiG~GtG~~t~~la~~  102 (236)
T 2bm8_A           83 RTIVELGVYNGGSLAWFRDL  102 (236)
T ss_dssp             SEEEEECCTTSHHHHHHHHH
T ss_pred             CEEEEEeCCCCHHHHHHHHh
Confidence            58999999999999999986

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=94.70  E-value=0.015  Score=48.99  Aligned_cols=28  Identities=21%  Similarity=0.219  Sum_probs=22.9

Q ss_pred             CCCCceeEeeccChHhHHHHHHC-CCccc
Q 029423          163 LSSWSVLDIGTGNGLLLQELSKQ-GYTLR  190 (193)
Q Consensus       163 ~~~~sILDLGCGNG~LL~eLak~-GFs~~  190 (193)
                      .+..+|||||||+|.+...|++. |=+|+
T Consensus        76 kpG~~VldlG~G~G~~~~~la~~VG~~G~  104 (233)
T 4df3_A           76 KEGDRILYLGIASGTTASHMSDIIGPRGR  104 (233)
T ss_dssp             CTTCEEEEETCTTSHHHHHHHHHHCTTCE
T ss_pred             CCCCEEEEecCcCCHHHHHHHHHhCCCce
Confidence            35678999999999999999985 54443

>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}

Probab=94.68  E-value=0.023  Score=57.10  Aligned_cols=22  Identities=32%  Similarity=0.529  Sum_probs=20.5

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.++..|++.|
T Consensus       722 g~rVLDVGCGTG~lai~LAr~g  743 (950)
T 3htx_A          722 ASTLVDFGCGSGSLLDSLLDYP  743 (950)
T ss_dssp             CSEEEEETCSSSHHHHHHTSSC
T ss_pred             CCEEEEECCCCCHHHHHHHHhC
Confidence            5689999999999999999987

>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...

Probab=94.67  E-value=0.015  Score=46.04  Aligned_cols=21  Identities=19%  Similarity=0.264  Sum_probs=18.9

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.+...|++.
T Consensus        59 ~~~vLdiG~G~G~~~~~la~~   79 (221)
T 3u81_A           59 PSLVLELGAYCGYSAVRMARL   79 (221)
T ss_dssp             CSEEEEECCTTSHHHHHHHTT
T ss_pred             CCEEEEECCCCCHHHHHHHHh
Confidence            458999999999999999984

>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*

Probab=94.66  E-value=0.034  Score=50.03  Aligned_cols=23  Identities=30%  Similarity=0.468  Sum_probs=20.7

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.+.
T Consensus       291 ~~~VLDlgcG~G~~sl~la~~~~  313 (425)
T 2jjq_A          291 GEKILDMYSGVGTFGIYLAKRGF  313 (425)
T ss_dssp             SSEEEEETCTTTHHHHHHHHTTC
T ss_pred             CCEEEEeeccchHHHHHHHHcCC
Confidence            45899999999999999999865

>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}

Probab=94.66  E-value=0.0061  Score=50.70  Aligned_cols=21  Identities=19%  Similarity=0.033  Sum_probs=18.1

Q ss_pred             CCCceeEeeccChHhHHHHHH
Q 029423          164 SSWSVLDIGTGNGLLLQELSK  184 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak  184 (193)
                      +..+|||||||+|.++..|+.
T Consensus       118 ~~~~vLDiGcG~G~~~~~la~  138 (305)
T 3ocj_A          118 PGCVVASVPCGWMSELLALDY  138 (305)
T ss_dssp             TTCEEEETTCTTCHHHHTSCC
T ss_pred             CCCEEEEecCCCCHHHHHHHH
Confidence            356899999999999999963

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=94.66  E-value=0.016  Score=47.60  Aligned_cols=22  Identities=18%  Similarity=0.418  Sum_probs=19.7

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||+|.++..|++.
T Consensus       110 ~~~~VLD~G~G~G~~~~~la~~  131 (275)
T 1yb2_A          110 PGMDILEVGVGSGNMSSYILYA  131 (275)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHH
T ss_pred             CcCEEEEecCCCCHHHHHHHHH
Confidence            3568999999999999999986

>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*

Probab=94.64  E-value=0.024  Score=50.56  Aligned_cols=23  Identities=30%  Similarity=0.245  Sum_probs=20.2

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.+.
T Consensus       287 ~~~VLDlgcG~G~~~~~la~~~~  309 (433)
T 1uwv_A          287 EDRVLDLFCGMGNFTLPLATQAA  309 (433)
T ss_dssp             TCEEEEESCTTTTTHHHHHTTSS
T ss_pred             CCEEEECCCCCCHHHHHHHhhCC
Confidence            45899999999999999998743

>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}

Probab=94.59  E-value=0.015  Score=45.29  Aligned_cols=21  Identities=19%  Similarity=0.096  Sum_probs=18.9

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.+...|++.
T Consensus        57 ~~~vLdiG~G~G~~~~~la~~   77 (210)
T 3c3p_A           57 PQLVVVPGDGLGCASWWFARA   77 (210)
T ss_dssp             CSEEEEESCGGGHHHHHHHTT
T ss_pred             CCEEEEEcCCccHHHHHHHHh
Confidence            458999999999999999875

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=94.56  E-value=0.016  Score=49.01  Aligned_cols=21  Identities=38%  Similarity=0.449  Sum_probs=19.4

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus       106 g~~VLDiG~G~G~~~~~la~~  126 (336)
T 2b25_A          106 GDTVLEAGSGSGGMSLFLSKA  126 (336)
T ss_dssp             TCEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEeCCCcCHHHHHHHHH
Confidence            568999999999999999986

>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*

Probab=94.56  E-value=0.015  Score=50.69  Aligned_cols=23  Identities=43%  Similarity=0.533  Sum_probs=21.0

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||+|||+|.++.++++.|.
T Consensus       218 ~~~vLD~gCGsG~~~i~~a~~~~  240 (373)
T 3tm4_A          218 GGSVLDPMCGSGTILIELALRRY  240 (373)
T ss_dssp             SCCEEETTCTTCHHHHHHHHTTC
T ss_pred             CCEEEEccCcCcHHHHHHHHhCC
Confidence            46899999999999999999875

>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}

Probab=94.56  E-value=0.016  Score=49.86  Aligned_cols=21  Identities=24%  Similarity=0.306  Sum_probs=19.1

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus       180 ~~~vlDvG~G~G~~~~~l~~~  200 (363)
T 3dp7_A          180 PKRLLDIGGNTGKWATQCVQY  200 (363)
T ss_dssp             CSEEEEESCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCcCHHHHHHHHh
Confidence            458999999999999999985

>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*

Probab=94.56  E-value=0.015  Score=49.91  Aligned_cols=23  Identities=22%  Similarity=0.300  Sum_probs=20.5

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.+.
T Consensus       210 ~~~vLDvG~G~G~~~~~l~~~~~  232 (372)
T 1fp1_D          210 ISTLVDVGGGSGRNLELIISKYP  232 (372)
T ss_dssp             CSEEEEETCTTSHHHHHHHHHCT
T ss_pred             CCEEEEeCCCCcHHHHHHHHHCC
Confidence            46899999999999999999864

>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}

Probab=94.55  E-value=0.014  Score=49.71  Aligned_cols=22  Identities=27%  Similarity=0.465  Sum_probs=19.6

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.++..|++..
T Consensus       185 ~~~vLDvG~G~G~~~~~l~~~~  206 (348)
T 3lst_A          185 TGTVADVGGGRGGFLLTVLREH  206 (348)
T ss_dssp             SEEEEEETCTTSHHHHHHHHHC
T ss_pred             CceEEEECCccCHHHHHHHHHC
Confidence            4689999999999999999863

>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*

Probab=94.53  E-value=0.017  Score=49.15  Aligned_cols=21  Identities=24%  Similarity=0.427  Sum_probs=19.2

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus       189 ~~~vlDvG~G~G~~~~~l~~~  209 (352)
T 1fp2_A          189 LESIVDVGGGTGTTAKIICET  209 (352)
T ss_dssp             CSEEEEETCTTSHHHHHHHHH
T ss_pred             CceEEEeCCCccHHHHHHHHH
Confidence            468999999999999999986

>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}

Probab=94.47  E-value=0.018  Score=47.79  Aligned_cols=21  Identities=29%  Similarity=0.483  Sum_probs=19.3

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus       166 ~~~vlDvG~G~G~~~~~l~~~  186 (335)
T 2r3s_A          166 PLKVLDISASHGLFGIAVAQH  186 (335)
T ss_dssp             CSEEEEETCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCcCHHHHHHHHH
Confidence            468999999999999999986

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=94.44  E-value=0.019  Score=44.98  Aligned_cols=21  Identities=29%  Similarity=0.291  Sum_probs=19.0

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||.|.+...|++.
T Consensus        70 ~~~vLdiG~G~G~~~~~la~~   90 (229)
T 2avd_A           70 AKKALDLGTFTGYSALALALA   90 (229)
T ss_dssp             CCEEEEECCTTSHHHHHHHTT
T ss_pred             CCEEEEEcCCccHHHHHHHHh
Confidence            458999999999999999985

>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51

Probab=94.43  E-value=0.02  Score=49.71  Aligned_cols=23  Identities=17%  Similarity=0.114  Sum_probs=21.1

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|.
T Consensus       154 ~~~VLDlgcGtG~~sl~la~~ga  176 (332)
T 2igt_A          154 PLKVLNLFGYTGVASLVAAAAGA  176 (332)
T ss_dssp             CCEEEEETCTTCHHHHHHHHTTC
T ss_pred             CCcEEEcccccCHHHHHHHHcCC
Confidence            45899999999999999999887

>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}

Probab=94.36  E-value=0.019  Score=48.45  Aligned_cols=21  Identities=24%  Similarity=0.582  Sum_probs=19.3

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus       180 ~~~vlDvG~G~G~~~~~l~~~  200 (352)
T 3mcz_A          180 ARTVIDLAGGHGTYLAQVLRR  200 (352)
T ss_dssp             CCEEEEETCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCcCHHHHHHHHh
Confidence            468999999999999999986

>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}

Probab=94.36  E-value=0.021  Score=52.14  Aligned_cols=23  Identities=35%  Similarity=0.500  Sum_probs=20.7

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||.|.++..|++.|.
T Consensus       159 ~~~VLDiGcGtG~la~~la~~~~  181 (480)
T 3b3j_A          159 DKIVLDVGCGSGILSFFAAQAGA  181 (480)
T ss_dssp             TCEEEEESCSTTHHHHHHHHTTC
T ss_pred             CCEEEEecCcccHHHHHHHHcCC
Confidence            46899999999999999999865

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=94.35  E-value=0.019  Score=46.70  Aligned_cols=21  Identities=24%  Similarity=0.344  Sum_probs=19.2

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        64 ~~~VLdiG~G~G~~~~~la~~   84 (248)
T 3tfw_A           64 AKRILEIGTLGGYSTIWMARE   84 (248)
T ss_dssp             CSEEEEECCTTSHHHHHHHTT
T ss_pred             CCEEEEecCCchHHHHHHHHh
Confidence            468999999999999999986

>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*

Probab=94.34  E-value=0.02  Score=49.59  Aligned_cols=21  Identities=19%  Similarity=0.450  Sum_probs=19.3

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus       204 ~~~vlDvG~G~G~~~~~l~~~  224 (368)
T 3reo_A          204 LTTIVDVGGGTGAVASMIVAK  224 (368)
T ss_dssp             CSEEEEETCTTSHHHHHHHHH
T ss_pred             CCEEEEeCCCcCHHHHHHHHh
Confidence            468999999999999999986

>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*

Probab=94.30  E-value=0.021  Score=48.61  Aligned_cols=21  Identities=24%  Similarity=0.403  Sum_probs=19.4

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus       191 ~~~vLDvG~G~G~~~~~l~~~  211 (359)
T 1x19_A          191 VKKMIDVGGGIGDISAAMLKH  211 (359)
T ss_dssp             CCEEEEESCTTCHHHHHHHHH
T ss_pred             CCEEEEECCcccHHHHHHHHH
Confidence            468999999999999999987

>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*

Probab=94.25  E-value=0.019  Score=48.97  Aligned_cols=22  Identities=23%  Similarity=0.273  Sum_probs=19.7

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.++..|++..
T Consensus       194 ~~~vlDvG~G~G~~~~~l~~~~  215 (358)
T 1zg3_A          194 LESLVDVGGGTGGVTKLIHEIF  215 (358)
T ss_dssp             CSEEEEETCTTSHHHHHHHHHC
T ss_pred             CCEEEEECCCcCHHHHHHHHHC
Confidence            3589999999999999999874

>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45

Probab=94.15  E-value=0.051  Score=48.39  Aligned_cols=62  Identities=16%  Similarity=0.192  Sum_probs=38.8

Q ss_pred             HHHHHHHHhhhhhhhccC--CCCCceecCC-chHHHHHHHHHhhhhhhccCcccccccccCCCccccccccCCCCceeEe
Q 029423           95 QSYWDSAYADELANFREH--GHAGEVWFGA-DVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDI  171 (193)
Q Consensus        95 keYWD~~Y~~EL~NF~e~--gD~GEiWFGe-d~~d~vv~Wlk~~~~~i~q~~ip~~~d~~~~e~~e~~~k~~~~~sILDL  171 (193)
                      .+..-..|+.-+..|...  ...|+ .|.. ...+.|++.+.           |                 ....+|||.
T Consensus       128 ~d~~G~~yE~ll~~~~~~~~~~~G~-fyTP~~v~~~mv~~l~-----------~-----------------~~~~~VlDp  178 (445)
T 2okc_A          128 GDVKGAIYESILEKNGQDKKSGAGQ-YFTPRPLIQAMVDCIN-----------P-----------------QMGETVCDP  178 (445)
T ss_dssp             SHHHHHHHHHHHHHHHTCTTTCCGG-GCCCHHHHHHHHHHHC-----------C-----------------CTTCCEEET
T ss_pred             hhHHHHHHHHHHHHHHhhccccCCc-ccCcHHHHHHHHHHhC-----------C-----------------CCCCEEecc
Confidence            467778888877777533  23454 4433 22233444321           1                 234589999


Q ss_pred             eccChHhHHHHHHC
Q 029423          172 GTGNGLLLQELSKQ  185 (193)
Q Consensus       172 GCGNG~LL~eLak~  185 (193)
                      |||+|.||..+++.
T Consensus       179 acGsG~fl~~~~~~  192 (445)
T 2okc_A          179 ACGTGGFLLTAYDY  192 (445)
T ss_dssp             TCTTCHHHHHHHHH
T ss_pred             CCCcchHHHHHHHH
Confidence            99999999998863

>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}

Probab=94.10  E-value=0.022  Score=47.88  Aligned_cols=21  Identities=29%  Similarity=0.232  Sum_probs=18.8

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||.|.|...|+..
T Consensus        50 ~~~VLDlGCG~GplAl~l~~~   70 (200)
T 3fzg_A           50 VSSILDFGCGFNPLALYQWNE   70 (200)
T ss_dssp             CSEEEEETCTTHHHHHHHHCS
T ss_pred             CCeEEEecCCCCHHHHHHHhc
Confidence            568999999999999999765

>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}

Probab=94.10  E-value=0.017  Score=48.07  Aligned_cols=22  Identities=27%  Similarity=0.291  Sum_probs=19.9

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||.|.++..|++.+
T Consensus       120 ~~~VLDlgcG~G~~s~~la~~~  141 (272)
T 3a27_A          120 NEVVVDMFAGIGYFTIPLAKYS  141 (272)
T ss_dssp             TCEEEETTCTTTTTHHHHHHHT
T ss_pred             CCEEEEecCcCCHHHHHHHHhC
Confidence            4689999999999999999874

>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*

Probab=94.03  E-value=0.025  Score=47.21  Aligned_cols=22  Identities=23%  Similarity=0.351  Sum_probs=19.5

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||.|.+...|++.
T Consensus        76 ~g~~VLDlG~GtG~~t~~la~~   97 (232)
T 3id6_C           76 KGTKVLYLGAASGTTISHVSDI   97 (232)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHH
T ss_pred             CCCEEEEEeecCCHHHHHHHHH
Confidence            4678999999999999999874

>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}

Probab=93.90  E-value=0.03  Score=45.79  Aligned_cols=21  Identities=29%  Similarity=0.310  Sum_probs=18.8

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.....|++.
T Consensus        61 ~~~VLDiG~G~G~~t~~la~~   81 (242)
T 3r3h_A           61 AKKVLELGTFTGYSALAMSLA   81 (242)
T ss_dssp             CSEEEEEESCCSHHHHHHHHT
T ss_pred             cCEEEEeeCCcCHHHHHHHHh
Confidence            358999999999999999984

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=93.89  E-value=0.025  Score=47.34  Aligned_cols=23  Identities=30%  Similarity=0.417  Sum_probs=20.0

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||||||+|.++..|++.|.
T Consensus        76 ~~~VLdiG~G~G~~~~~l~~~~~   98 (281)
T 1mjf_A           76 PKRVLVIGGGDGGTVREVLQHDV   98 (281)
T ss_dssp             CCEEEEEECTTSHHHHHHTTSCC
T ss_pred             CCeEEEEcCCcCHHHHHHHhCCC
Confidence            35899999999999999998743

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=93.84  E-value=0.024  Score=45.88  Aligned_cols=21  Identities=19%  Similarity=0.147  Sum_probs=18.7

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||.|.+...|++.
T Consensus        57 ~~~vLdiG~G~G~~~~~la~~   77 (221)
T 3dr5_A           57 STGAIAITPAAGLVGLYILNG   77 (221)
T ss_dssp             CCEEEEESTTHHHHHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHh
Confidence            458999999999999999984

>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*

Probab=93.81  E-value=0.029  Score=48.57  Aligned_cols=21  Identities=19%  Similarity=0.431  Sum_probs=19.2

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus       202 ~~~vlDvG~G~G~~~~~l~~~  222 (364)
T 3p9c_A          202 LGTLVDVGGGVGATVAAIAAH  222 (364)
T ss_dssp             CSEEEEETCTTSHHHHHHHHH
T ss_pred             CCEEEEeCCCCCHHHHHHHHH
Confidence            468999999999999999985

>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*

Probab=93.78  E-value=0.026  Score=47.38  Aligned_cols=21  Identities=38%  Similarity=0.507  Sum_probs=19.0

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus       170 ~~~vlDvG~G~G~~~~~l~~~  190 (332)
T 3i53_A          170 LGHVVDVGGGSGGLLSALLTA  190 (332)
T ss_dssp             GSEEEEETCTTSHHHHHHHHH
T ss_pred             CCEEEEeCCChhHHHHHHHHH
Confidence            358999999999999999985

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=93.72  E-value=0.031  Score=47.39  Aligned_cols=21  Identities=38%  Similarity=0.548  Sum_probs=19.1

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||.|.++..|++.
T Consensus        96 ~~~VLdiG~G~G~~~~~l~~~  116 (304)
T 3bwc_A           96 PERVLIIGGGDGGVLREVLRH  116 (304)
T ss_dssp             CCEEEEEECTTSHHHHHHHTC
T ss_pred             CCeEEEEcCCCCHHHHHHHhC
Confidence            358999999999999999986

>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}

Probab=93.69  E-value=0.021  Score=48.82  Aligned_cols=22  Identities=32%  Similarity=0.274  Sum_probs=19.8

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||+|||+|.++.++++.+
T Consensus       204 ~~~vLD~gcGsG~~~ie~a~~~  225 (354)
T 3tma_A          204 GMRVLDPFTGSGTIALEAASTL  225 (354)
T ss_dssp             TCCEEESSCTTSHHHHHHHHHH
T ss_pred             CCEEEeCCCCcCHHHHHHHHhh
Confidence            5689999999999999999864

>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51

Probab=93.54  E-value=0.033  Score=48.54  Aligned_cols=24  Identities=25%  Similarity=0.112  Sum_probs=21.6

Q ss_pred             CCCceeEeeccChHhHHHHHHCCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      +..+|||+|||+|.++..|++.|.
T Consensus       217 ~~~~VLDl~~G~G~~~~~la~~g~  240 (396)
T 2as0_A          217 PGDRVLDVFTYTGGFAIHAAIAGA  240 (396)
T ss_dssp             TTCEEEETTCTTTHHHHHHHHTTC
T ss_pred             CCCeEEEecCCCCHHHHHHHHCCC
Confidence            456899999999999999999875

>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*

Probab=93.48  E-value=0.033  Score=48.99  Aligned_cols=23  Identities=13%  Similarity=0.049  Sum_probs=21.0

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||+|||+|.++..|++.|.
T Consensus       213 ~~~VLDl~cGtG~~sl~la~~ga  235 (385)
T 2b78_A          213 GKTVLNLFSYTAAFSVAAAMGGA  235 (385)
T ss_dssp             TCEEEEETCTTTHHHHHHHHTTB
T ss_pred             CCeEEEEeeccCHHHHHHHHCCC
Confidence            46899999999999999999876

>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}

Probab=93.45  E-value=0.03  Score=46.80  Aligned_cols=20  Identities=30%  Similarity=0.556  Sum_probs=18.7

Q ss_pred             CceeEeeccChHhHHHHHHC
Q 029423          166 WSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~  185 (193)
                      .+|||||||+|.++..|++.
T Consensus       169 ~~vlDvG~G~G~~~~~l~~~  188 (334)
T 2ip2_A          169 RSFVDVGGGSGELTKAILQA  188 (334)
T ss_dssp             CEEEEETCTTCHHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHH
Confidence            68999999999999999986

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=93.35  E-value=0.038  Score=44.39  Aligned_cols=21  Identities=29%  Similarity=0.316  Sum_probs=18.9

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        73 ~~~vLdiG~G~G~~~~~la~~   93 (232)
T 3cbg_A           73 AKQVLEIGVFRGYSALAMALQ   93 (232)
T ss_dssp             CCEEEEECCTTSHHHHHHHTT
T ss_pred             CCEEEEecCCCCHHHHHHHHh
Confidence            358999999999999999985

>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}

Probab=93.33  E-value=0.039  Score=48.21  Aligned_cols=24  Identities=17%  Similarity=0.014  Sum_probs=21.5

Q ss_pred             CCCceeEeeccChHhHHHHHHCCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      +..+|||||||+|.++..|++.|.
T Consensus       220 ~~~~VLDl~cG~G~~sl~la~~g~  243 (396)
T 3c0k_A          220 ENKRVLNCFSYTGGFAVSALMGGC  243 (396)
T ss_dssp             TTCEEEEESCTTCSHHHHHHHTTC
T ss_pred             CCCeEEEeeccCCHHHHHHHHCCC
Confidence            356899999999999999999885

>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*

Probab=93.25  E-value=0.041  Score=47.39  Aligned_cols=21  Identities=29%  Similarity=0.526  Sum_probs=19.4

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus       203 ~~~vlDvG~G~G~~~~~l~~~  223 (369)
T 3gwz_A          203 AATAVDIGGGRGSLMAAVLDA  223 (369)
T ss_dssp             CSEEEEETCTTSHHHHHHHHH
T ss_pred             CcEEEEeCCCccHHHHHHHHH
Confidence            468999999999999999987

>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A

Probab=93.20  E-value=0.031  Score=47.42  Aligned_cols=24  Identities=25%  Similarity=0.194  Sum_probs=21.5

Q ss_pred             CceeEeeccChHhHHHHHHCCCcc
Q 029423          166 WSVLDIGTGNGLLLQELSKQGYTL  189 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~GFs~  189 (193)
                      .+|||+|||+|.+.+.|+..|.+.
T Consensus        90 ~~VLDl~~G~G~dal~lA~~g~~V  113 (258)
T 2oyr_A           90 PDVVDATAGLGRDAFVLASVGCRV  113 (258)
T ss_dssp             CCEEETTCTTCHHHHHHHHHTCCE
T ss_pred             CEEEEcCCcCCHHHHHHHHcCCEE
Confidence            689999999999999999987653

>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*

Probab=93.15  E-value=0.047  Score=50.61  Aligned_cols=63  Identities=17%  Similarity=0.227  Sum_probs=25.3

Q ss_pred             cHHHHHHHHhhhhhhhccC--CCCCceecCC-chHHHHHHHHHhhhhhhccCcccccccccCCCccccccccCCCCceeE
Q 029423           94 LQSYWDSAYADELANFREH--GHAGEVWFGA-DVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLD  170 (193)
Q Consensus        94 tkeYWD~~Y~~EL~NF~e~--gD~GEiWFGe-d~~d~vv~Wlk~~~~~i~q~~ip~~~d~~~~e~~e~~~k~~~~~sILD  170 (193)
                      ..+.+-..|+.-+..|...  ...|+ .|.. ...+.|++++.           |                 .+..+|||
T Consensus       125 ~~d~lG~~YE~ll~~~a~~~~~~~G~-fyTP~~iv~~mv~~l~-----------p-----------------~~~~~VlD  175 (541)
T 2ar0_A          125 SRDDFGDMYEGLLQKNANETKSGAGQ-YFTPRPLIKTIIHLLK-----------P-----------------QPREVVQD  175 (541)
T ss_dssp             -------------------------C-CCCCHHHHHHHHHHHC-----------C-----------------CTTCCEEE
T ss_pred             ChhHHHHHHHHHHHHHHHhccccCCe-eeCCHHHHHHHHHHhc-----------c-----------------CCCCeEec
Confidence            4567888898888877532  34565 4433 22344454431           1                 23468999


Q ss_pred             eeccChHhHHHHHHC
Q 029423          171 IGTGNGLLLQELSKQ  185 (193)
Q Consensus       171 LGCGNG~LL~eLak~  185 (193)
                      .+||+|.||..+++.
T Consensus       176 PaCGSG~fLi~a~~~  190 (541)
T 2ar0_A          176 PAAGTAGFLIEADRY  190 (541)
T ss_dssp             TTCTTTHHHHHHHHH
T ss_pred             CCcccchHHHHHHHH
Confidence            999999999988763

>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}

Probab=93.02  E-value=0.05  Score=48.54  Aligned_cols=24  Identities=21%  Similarity=0.152  Sum_probs=21.7

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||+|||+|.++..+++.|..
T Consensus       215 g~~VLDlg~GtG~~sl~~a~~ga~  238 (393)
T 4dmg_A          215 GERVLDVYSYVGGFALRAARKGAY  238 (393)
T ss_dssp             TCEEEEESCTTTHHHHHHHHTTCE
T ss_pred             CCeEEEcccchhHHHHHHHHcCCe
Confidence            568999999999999999998864

>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}

Probab=92.84  E-value=0.097  Score=45.44  Aligned_cols=21  Identities=24%  Similarity=0.301  Sum_probs=18.6

Q ss_pred             CceeEeeccChHhHHHHHHCC
Q 029423          166 WSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~G  186 (193)
                      .+|||||||+|.++..|++.+
T Consensus       215 ~~vLDl~cG~G~~~l~la~~~  235 (369)
T 3bt7_A          215 GDLLELYCGNGNFSLALARNF  235 (369)
T ss_dssp             SEEEEESCTTSHHHHHHGGGS
T ss_pred             CEEEEccCCCCHHHHHHHhcC
Confidence            479999999999999999853

>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*

Probab=92.82  E-value=0.044  Score=46.76  Aligned_cols=21  Identities=38%  Similarity=0.536  Sum_probs=19.0

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        78 ~~~VLdiG~G~G~~~~~l~~~   98 (314)
T 1uir_A           78 PKRVLIVGGGEGATLREVLKH   98 (314)
T ss_dssp             CCEEEEEECTTSHHHHHHTTS
T ss_pred             CCeEEEEcCCcCHHHHHHHhc
Confidence            358999999999999999986

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=92.78  E-value=0.047  Score=45.85  Aligned_cols=21  Identities=38%  Similarity=0.607  Sum_probs=19.0

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||.|.++..|++.
T Consensus        79 ~~~VLdiG~G~G~~~~~l~~~   99 (283)
T 2i7c_A           79 PKNVLVVGGGDGGIIRELCKY   99 (283)
T ss_dssp             CCEEEEEECTTSHHHHHHTTC
T ss_pred             CCeEEEEeCCcCHHHHHHHHc
Confidence            358999999999999999886

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=92.72  E-value=0.057  Score=44.25  Aligned_cols=21  Identities=19%  Similarity=0.248  Sum_probs=18.8

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||.|..+..|++.
T Consensus        80 ~~~VLeiG~G~G~~~~~la~~  100 (247)
T 1sui_A           80 AKNTMEIGVYTGYSLLATALA  100 (247)
T ss_dssp             CCEEEEECCGGGHHHHHHHHH
T ss_pred             cCEEEEeCCCcCHHHHHHHHh
Confidence            358999999999999999985

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=92.71  E-value=0.045  Score=45.83  Aligned_cols=21  Identities=33%  Similarity=0.553  Sum_probs=19.0

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++.+|++.
T Consensus        76 ~~~VLdiG~G~G~~~~~l~~~   96 (275)
T 1iy9_A           76 PEHVLVVGGGDGGVIREILKH   96 (275)
T ss_dssp             CCEEEEESCTTCHHHHHHTTC
T ss_pred             CCEEEEECCchHHHHHHHHhC
Confidence            358999999999999999986

>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*

Probab=92.67  E-value=0.047  Score=46.22  Aligned_cols=21  Identities=43%  Similarity=0.525  Sum_probs=19.1

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus        91 ~~~VLdiG~G~G~~~~~l~~~  111 (296)
T 1inl_A           91 PKKVLIIGGGDGGTLREVLKH  111 (296)
T ss_dssp             CCEEEEEECTTCHHHHHHTTS
T ss_pred             CCEEEEEcCCcCHHHHHHHhc
Confidence            358999999999999999987

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=92.41  E-value=0.055  Score=46.23  Aligned_cols=22  Identities=41%  Similarity=0.569  Sum_probs=19.5

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||.|.++..|++.+
T Consensus        96 ~~~VLdiG~G~G~~~~~l~~~~  117 (304)
T 2o07_A           96 PRKVLIIGGGDGGVLREVVKHP  117 (304)
T ss_dssp             CCEEEEEECTTSHHHHHHTTCT
T ss_pred             CCEEEEECCCchHHHHHHHHcC
Confidence            3589999999999999999873

>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*

Probab=92.26  E-value=0.056  Score=46.59  Aligned_cols=20  Identities=30%  Similarity=0.355  Sum_probs=18.7

Q ss_pred             CceeEeeccChHhHHHHHHC
Q 029423          166 WSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~  185 (193)
                      .+|||||||+|.++..|++.
T Consensus       181 ~~v~DvGgG~G~~~~~l~~~  200 (353)
T 4a6d_A          181 PLMCDLGGGAGALAKECMSL  200 (353)
T ss_dssp             SEEEEETCTTSHHHHHHHHH
T ss_pred             CeEEeeCCCCCHHHHHHHHh
Confidence            57999999999999999987

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=92.25  E-value=0.053  Score=47.25  Aligned_cols=21  Identities=38%  Similarity=0.631  Sum_probs=19.1

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++..|++.
T Consensus       121 ~~~VLdIG~G~G~~a~~la~~  141 (334)
T 1xj5_A          121 PKKVLVIGGGDGGVLREVARH  141 (334)
T ss_dssp             CCEEEEETCSSSHHHHHHTTC
T ss_pred             CCEEEEECCCccHHHHHHHHc
Confidence            358999999999999999986

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=92.11  E-value=0.12  Score=43.90  Aligned_cols=22  Identities=18%  Similarity=0.095  Sum_probs=19.4

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||+|||+|.+...|++.
T Consensus       118 ~g~~VLDlg~G~G~~t~~la~~  139 (315)
T 1ixk_A          118 PGEIVADMAAAPGGKTSYLAQL  139 (315)
T ss_dssp             TTCEEEECCSSCSHHHHHHHHH
T ss_pred             CCCEEEEeCCCCCHHHHHHHHH
Confidence            3568999999999999999975

>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*

Probab=92.07  E-value=0.06  Score=46.31  Aligned_cols=21  Identities=38%  Similarity=0.607  Sum_probs=19.0

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||.|.++..|++.
T Consensus       117 ~~~VLdiG~G~G~~~~~l~~~  137 (321)
T 2pt6_A          117 PKNVLVVGGGDGGIIRELCKY  137 (321)
T ss_dssp             CCEEEEEECTTCHHHHHHTTC
T ss_pred             CCEEEEEcCCccHHHHHHHHc
Confidence            358999999999999999986

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=91.91  E-value=0.087  Score=42.58  Aligned_cols=21  Identities=14%  Similarity=0.164  Sum_probs=18.7

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||.|..+..|++.
T Consensus        71 ~~~VLeiG~G~G~~~~~la~~   91 (237)
T 3c3y_A           71 AKKTIEVGVFTGYSLLLTALS   91 (237)
T ss_dssp             CCEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEeCCCCCHHHHHHHHh
Confidence            458999999999999999875

>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A

Probab=91.46  E-value=0.15  Score=42.09  Aligned_cols=21  Identities=19%  Similarity=0.148  Sum_probs=18.8

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||+|||.|.+...|++.
T Consensus        84 g~~VLDlgaG~G~~t~~la~~  104 (274)
T 3ajd_A           84 DDFILDMCAAPGGKTTHLAQL  104 (274)
T ss_dssp             TCEEEETTCTTCHHHHHHHHH
T ss_pred             cCEEEEeCCCccHHHHHHHHH
Confidence            568999999999999999973

>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*

Probab=90.97  E-value=0.088  Score=45.62  Aligned_cols=19  Identities=32%  Similarity=0.211  Sum_probs=17.1

Q ss_pred             CCceeEeeccChHhHHHHH
Q 029423          165 SWSVLDIGTGNGLLLQELS  183 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLa  183 (193)
                      ..+|||||||-|.|...++
T Consensus       106 p~~VLDlGCG~gpLal~~~  124 (253)
T 3frh_A          106 PRRVLDIACGLNPLALYER  124 (253)
T ss_dssp             CSEEEEETCTTTHHHHHHT
T ss_pred             CCeEEEecCCccHHHHHhc
Confidence            4689999999999999877

>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A

Probab=90.93  E-value=0.099  Score=43.81  Aligned_cols=21  Identities=24%  Similarity=0.014  Sum_probs=18.9

Q ss_pred             CceeEeeccChHhHHHHHHCC
Q 029423          166 WSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~G  186 (193)
                      .+|||||||.|.++.+|++.|
T Consensus        74 ~~VL~iG~G~G~~~~~ll~~~   94 (262)
T 2cmg_A           74 KEVLIVDGFDLELAHQLFKYD   94 (262)
T ss_dssp             CEEEEESSCCHHHHHHHTTSS
T ss_pred             CEEEEEeCCcCHHHHHHHhCC
Confidence            589999999999999998874

>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}

Probab=90.84  E-value=0.08  Score=48.08  Aligned_cols=24  Identities=21%  Similarity=0.271  Sum_probs=21.3

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||.|.+...|++.|.+
T Consensus        94 g~~VLDLgcG~G~~al~LA~~g~~  117 (410)
T 3ll7_A           94 GTKVVDLTGGLGIDFIALMSKASQ  117 (410)
T ss_dssp             TCEEEESSCSSSHHHHHHHTTCSE
T ss_pred             CCEEEEeCCCchHHHHHHHhcCCE
Confidence            468999999999999999998754

>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A

Probab=90.82  E-value=0.15  Score=45.16  Aligned_cols=23  Identities=13%  Similarity=0.143  Sum_probs=20.2

Q ss_pred             CCCceeEeeccChHhHHHHHHCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~G  186 (193)
                      +..+|||+|||.|.+...|++.+
T Consensus       246 ~g~~VLDlgaG~G~~t~~la~~~  268 (429)
T 1sqg_A          246 NGEHILDLCAAPGGKTTHILEVA  268 (429)
T ss_dssp             TTCEEEEESCTTCHHHHHHHHHC
T ss_pred             CcCeEEEECCCchHHHHHHHHHc
Confidence            35689999999999999999874

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=90.54  E-value=0.1  Score=45.00  Aligned_cols=21  Identities=43%  Similarity=0.585  Sum_probs=18.9

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||.|.++..|++.
T Consensus       109 ~~~VLdIG~G~G~~~~~l~~~  129 (314)
T 2b2c_A          109 PKRVLIIGGGDGGILREVLKH  129 (314)
T ss_dssp             CCEEEEESCTTSHHHHHHTTC
T ss_pred             CCEEEEEcCCcCHHHHHHHHc
Confidence            358999999999999999886

>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*

Probab=90.43  E-value=0.084  Score=45.29  Aligned_cols=23  Identities=26%  Similarity=0.222  Sum_probs=20.7

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      +.+|||+|||.|.|...+++.|-
T Consensus       126 g~~VlD~~aG~G~~~i~~a~~g~  148 (278)
T 3k6r_A          126 DELVVDMFAGIGHLSLPIAVYGK  148 (278)
T ss_dssp             TCEEEETTCTTTTTTHHHHHHTC
T ss_pred             CCEEEEecCcCcHHHHHHHHhcC
Confidence            56899999999999999999874

>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A

Probab=90.39  E-value=0.13  Score=43.36  Aligned_cols=25  Identities=28%  Similarity=0.213  Sum_probs=21.9

Q ss_pred             CCCceeEeeccChHhHHHHHHCCCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      +...|||++||.|.++.++++.|..
T Consensus       235 ~~~~vlD~f~GsGt~~~~a~~~g~~  259 (297)
T 2zig_A          235 VGDVVLDPFAGTGTTLIAAARWGRR  259 (297)
T ss_dssp             TTCEEEETTCTTTHHHHHHHHTTCE
T ss_pred             CCCEEEECCCCCCHHHHHHHHcCCe
Confidence            3568999999999999999999863

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=90.05  E-value=0.13  Score=45.20  Aligned_cols=20  Identities=10%  Similarity=0.253  Sum_probs=18.3

Q ss_pred             CceeEeeccChHhHHHHHHC
Q 029423          166 WSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~  185 (193)
                      .+|||||||.|.+...|++.
T Consensus        91 ~rVLdIG~G~G~la~~la~~  110 (317)
T 3gjy_A           91 LRITHLGGGACTMARYFADV  110 (317)
T ss_dssp             CEEEEESCGGGHHHHHHHHH
T ss_pred             CEEEEEECCcCHHHHHHHHH
Confidence            48999999999999999983

>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*

Probab=89.97  E-value=0.11  Score=45.21  Aligned_cols=21  Identities=19%  Similarity=0.060  Sum_probs=18.9

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||+|||+|.++..|++.
T Consensus       210 ~~~VLDlg~G~G~~~~~la~~  230 (382)
T 1wxx_A          210 GERALDVFSYAGGFALHLALG  230 (382)
T ss_dssp             EEEEEEETCTTTHHHHHHHHH
T ss_pred             CCeEEEeeeccCHHHHHHHHh
Confidence            457999999999999999986

>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}

Probab=89.77  E-value=0.12  Score=43.11  Aligned_cols=20  Identities=20%  Similarity=0.175  Sum_probs=16.5

Q ss_pred             CceeEeeccC---hHhHHHHHHC
Q 029423          166 WSVLDIGTGN---GLLLQELSKQ  185 (193)
Q Consensus       166 ~sILDLGCGN---G~LL~eLak~  185 (193)
                      .+|||||||.   |.+...+.+.
T Consensus        79 ~~vLDlGcG~pt~G~~~~~~~~~  101 (274)
T 2qe6_A           79 SQFLDLGSGLPTVQNTHEVAQSV  101 (274)
T ss_dssp             CEEEEETCCSCCSSCHHHHHHHH
T ss_pred             CEEEEECCCCCCCChHHHHHHHh
Confidence            5799999999   9988777653

>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}

Probab=89.74  E-value=0.1  Score=46.18  Aligned_cols=22  Identities=27%  Similarity=0.365  Sum_probs=19.6

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||+|||+|.|+.+++..|
T Consensus       196 ~~~vlDp~CGSGt~lieaa~~~  217 (385)
T 3ldu_A          196 GRVLVDPMCGSGTILIEAAMIG  217 (385)
T ss_dssp             TSCEEETTCTTCHHHHHHHHHH
T ss_pred             CCeEEEcCCCCCHHHHHHHHHH
Confidence            5689999999999999998764

>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}

Probab=88.83  E-value=0.4  Score=42.84  Aligned_cols=21  Identities=19%  Similarity=0.238  Sum_probs=18.9

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||+|||.|.....|++.
T Consensus       260 g~~VLDlgaG~G~~t~~la~~  280 (450)
T 2yxl_A          260 GETVVDLAAAPGGKTTHLAEL  280 (450)
T ss_dssp             TCEEEESSCTTCHHHHHHHHH
T ss_pred             cCEEEEeCCCccHHHHHHHHH
Confidence            468999999999999999984

>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*

Probab=88.75  E-value=0.23  Score=47.52  Aligned_cols=24  Identities=13%  Similarity=0.010  Sum_probs=21.5

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..+++.|..
T Consensus       540 g~~VLDlg~GtG~~sl~aa~~ga~  563 (703)
T 3v97_A          540 GKDFLNLFSYTGSATVHAGLGGAR  563 (703)
T ss_dssp             TCEEEEESCTTCHHHHHHHHTTCS
T ss_pred             CCcEEEeeechhHHHHHHHHCCCC
Confidence            458999999999999999998864

>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*

Probab=88.23  E-value=0.15  Score=43.82  Aligned_cols=19  Identities=26%  Similarity=0.221  Sum_probs=17.2

Q ss_pred             CCceeEeeccChHhHHHHHH
Q 029423          165 SWSVLDIGTGNGLLLQELSK  184 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak  184 (193)
                      ..+|||+|||+|.++.. ++
T Consensus       196 ~~~VLDlg~G~G~~~l~-a~  214 (336)
T 2yx1_A          196 NDVVVDMFAGVGPFSIA-CK  214 (336)
T ss_dssp             TCEEEETTCTTSHHHHH-TT
T ss_pred             CCEEEEccCccCHHHHh-cc
Confidence            46899999999999999 77

>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*

Probab=88.22  E-value=0.19  Score=42.64  Aligned_cols=21  Identities=14%  Similarity=0.276  Sum_probs=16.7

Q ss_pred             CCceeEeeccChH----hHHHHHHC
Q 029423          165 SWSVLDIGTGNGL----LLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~----LL~eLak~  185 (193)
                      ..+|||+|||+|.    +...|++.
T Consensus       106 ~~rIld~GCgTGee~ysiAi~L~e~  130 (274)
T 1af7_A          106 EYRVWSAAASTGEEPYSIAITLADA  130 (274)
T ss_dssp             CEEEEESCCTTTHHHHHHHHHHHHH
T ss_pred             CcEEEEeeccCChhHHHHHHHHHHh
Confidence            4689999999998    66666664

>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}

Probab=88.00  E-value=0.16  Score=45.19  Aligned_cols=22  Identities=23%  Similarity=0.232  Sum_probs=19.4

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||++||+|.|+.+++..+
T Consensus       202 ~~~vlDp~CGSGt~~ieaa~~~  223 (393)
T 3k0b_A          202 DRPFYDPVCGSGTIPIEAALIG  223 (393)
T ss_dssp             TSCEEETTCTTSHHHHHHHHHH
T ss_pred             CCeEEEcCCCCCHHHHHHHHHh
Confidence            4689999999999999998754

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=86.03  E-value=0.33  Score=42.45  Aligned_cols=21  Identities=29%  Similarity=0.104  Sum_probs=15.8

Q ss_pred             CCCceeEeeccChHhH-HHHHH
Q 029423          164 SSWSVLDIGTGNGLLL-QELSK  184 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL-~eLak  184 (193)
                      +..+|||||||.|.+. ..|++
T Consensus       122 ~g~rVLDIGcG~G~~ta~~lA~  143 (298)
T 3fpf_A          122 RGERAVFIGGGPLPLTGILLSH  143 (298)
T ss_dssp             TTCEEEEECCCSSCHHHHHHHH
T ss_pred             CcCEEEEECCCccHHHHHHHHH
Confidence            4678999999998654 44555

>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*

Probab=85.80  E-value=0.12  Score=45.56  Aligned_cols=21  Identities=14%  Similarity=0.072  Sum_probs=18.2

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||-|.|...++..
T Consensus       133 p~~VLDLGCG~GpLAl~~~~~  153 (281)
T 3lcv_B          133 PNTLRDLACGLNPLAAPWMGL  153 (281)
T ss_dssp             CSEEEETTCTTGGGCCTTTTC
T ss_pred             CceeeeeccCccHHHHHHHhh
Confidence            458999999999999888765

>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*

Probab=85.76  E-value=0.32  Score=43.04  Aligned_cols=21  Identities=19%  Similarity=0.137  Sum_probs=19.1

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||+|||+|.++..+++.
T Consensus        48 ~~~VLDl~aGtG~~~l~~a~~   68 (378)
T 2dul_A           48 PKIVLDALSATGIRGIRFALE   68 (378)
T ss_dssp             CSEEEESSCTTSHHHHHHHHH
T ss_pred             CCEEEECCCchhHHHHHHHHh
Confidence            458999999999999999986

>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}

Probab=85.59  E-value=0.26  Score=43.84  Aligned_cols=22  Identities=23%  Similarity=0.274  Sum_probs=19.3

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ...|||.+||+|.|+.+.+..+
T Consensus       195 ~~~llDp~CGSGt~lIEAa~~a  216 (384)
T 3ldg_A          195 DKPFVDPTCGSGTFCIEAAMIG  216 (384)
T ss_dssp             TSCEEETTCTTSHHHHHHHHHH
T ss_pred             CCeEEEeCCcCCHHHHHHHHHh
Confidence            4689999999999999998754

>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}

Probab=84.43  E-value=0.93  Score=42.10  Aligned_cols=19  Identities=26%  Similarity=0.268  Sum_probs=16.7

Q ss_pred             CceeEeeccChHhHHHHHH
Q 029423          166 WSVLDIGTGNGLLLQELSK  184 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak  184 (193)
                      .+|||.+||+|.||..+++
T Consensus       246 ~~VlDPaCGSG~fLi~a~~  264 (544)
T 3khk_A          246 GRVYDPAMGSGGFFVSSDK  264 (544)
T ss_dssp             EEEEESSCTTCHHHHHHHH
T ss_pred             CeEeCcccCcCcHHHHHHH
Confidence            3899999999999998754

>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}

Probab=84.30  E-value=0.72  Score=42.98  Aligned_cols=22  Identities=23%  Similarity=0.439  Sum_probs=19.2

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      ...+|||.+||.|.||..+++.
T Consensus       221 ~~~~VlDPaCGSG~fLi~a~~~  242 (542)
T 3lkd_A          221 QGFTLYDATMGSGSLLLNAKRY  242 (542)
T ss_dssp             TTCEEEETTCTTSTTGGGHHHH
T ss_pred             CCCEEeecccchhHHHHHHHHH
Confidence            3568999999999999998874

>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*

Probab=83.58  E-value=1.1  Score=41.14  Aligned_cols=22  Identities=23%  Similarity=0.264  Sum_probs=19.3

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||+|||.|.....|++.
T Consensus       101 ~g~~VLDlgaGpG~kt~~LA~~  122 (464)
T 3m6w_A          101 PGERVLDLAAAPGGKTTHLAAR  122 (464)
T ss_dssp             TTCEEEESSCTTCHHHHHHHHH
T ss_pred             CCCEEEEEcCCcCHHHHHHHHh
Confidence            3568999999999999999875

>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}

Probab=82.34  E-value=0.57  Score=40.53  Aligned_cols=22  Identities=18%  Similarity=0.273  Sum_probs=19.8

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+||||| |.|.++..|++.|.
T Consensus       173 ~~~VLDlG-G~G~~~~~la~~~~  194 (373)
T 2qm3_A          173 NKDIFVLG-DDDLTSIALMLSGL  194 (373)
T ss_dssp             TCEEEEES-CTTCHHHHHHHHTC
T ss_pred             CCEEEEEC-CCCHHHHHHHHhCC
Confidence            46899999 99999999998875

>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38

Probab=81.53  E-value=1.6  Score=37.40  Aligned_cols=21  Identities=19%  Similarity=0.146  Sum_probs=18.7

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||+|||.|.....|++.
T Consensus       103 g~~VLDlcaG~G~kt~~la~~  123 (309)
T 2b9e_A          103 GSHVIDACAAPGNKTSHLAAL  123 (309)
T ss_dssp             TCEEEESSCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCChhHHHHHHHHH
Confidence            568999999999999999874

>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}

Probab=81.24  E-value=1.4  Score=40.22  Aligned_cols=22  Identities=18%  Similarity=0.338  Sum_probs=19.4

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||+|||.|.....|++.
T Consensus       117 ~g~~VLDl~aGpG~kt~~lA~~  138 (479)
T 2frx_A          117 APQRVMDVAAAPGSKTTQISAR  138 (479)
T ss_dssp             CCSEEEESSCTTSHHHHHHHHH
T ss_pred             CCCEEEEeCCCCCHHHHHHHHh
Confidence            3568999999999999999985

>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}

Probab=81.22  E-value=0.7  Score=41.33  Aligned_cols=19  Identities=16%  Similarity=0.448  Sum_probs=16.3

Q ss_pred             CCCceeEeeccChHhHHHH
Q 029423          164 SSWSVLDIGTGNGLLLQEL  182 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eL  182 (193)
                      ...+|+|||||.|...+.+
T Consensus        52 ~~~~IaDlGCssG~Nt~~~   70 (374)
T 3b5i_A           52 PPFTAVDLGCSSGANTVHI   70 (374)
T ss_dssp             CCEEEEEETCCSSHHHHHH
T ss_pred             CceEEEecCCCCChhHHHH
Confidence            3578999999999888776

>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}

Probab=80.45  E-value=1.6  Score=39.86  Aligned_cols=22  Identities=27%  Similarity=0.256  Sum_probs=18.9

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||+|||.|.....|++.
T Consensus       105 ~g~~VLDlcaGpGgkt~~lA~~  126 (456)
T 3m4x_A          105 PGEKVLDLCAAPGGKSTQLAAQ  126 (456)
T ss_dssp             TTCEEEESSCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCcCHHHHHHHHH
Confidence            3568999999999999988874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	193
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	98.83
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	98.12
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	98.12
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	98.07
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	97.74
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	97.65
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	97.63
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	97.55
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	97.27
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	97.2
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	97.1
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	97.03
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	96.95
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.85
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	96.77
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	96.71
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.68
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	96.62
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	96.62
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.61
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	96.56
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	96.52
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	96.51
d1yzha1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep	96.5
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	96.47
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	96.34
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.29
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	96.27
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	96.08
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	96.08
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	96.06
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.05
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	95.97
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	95.83
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	95.65
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	95.46
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	95.3
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	95.21
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	94.68
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	94.6
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	94.55
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	94.46
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	94.42
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	94.28
d2f8la1	328	Hypothetical protein Lmo1582 {Listeria monocytogen	94.23
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	94.09
d1kyza2	243	Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltra	93.39
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	93.36
d1fp1d2	244	Chalcone O-methyltransferase {Alfalfa (Medicago sa	93.23
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	92.14
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	91.97
d1fp2a2	244	Isoflavone O-methyltransferase {Alfalfa (Medicago	91.61
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	91.28
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	90.83
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	90.64
d2h00a1	250	Methyltransferase 10 domain containing protein MET	90.47
d1uwva2	358	rRNA (Uracil-5-)-methyltransferase RumA, catalytic	89.7
d2ifta1	183	Putative methylase HI0767 {Haemophilus influenzae	85.09
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	84.55
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	83.63

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=1.7e-09  Score=85.98  Aligned_cols=63  Identities=8%  Similarity=0.106  Sum_probs=46.6

Q ss_pred             CcHHHHHHHHhhhhhhhccCCCCCceecCCchHHHHHHHHHhhhhhhccCcccccccccCCCccccccccCCCCceeEee
Q 029423           93 GLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIG  172 (193)
Q Consensus        93 GtkeYWD~~Y~~EL~NF~e~gD~GEiWFGed~~d~vv~Wlk~~~~~i~q~~ip~~~d~~~~e~~e~~~k~~~~~sILDLG  172 (193)
                      -|.++|+++|.+....          |+.+.....+++|+.+.+.      +                  .++.+|||+|
T Consensus         8 ~~~e~W~~~~~~~~~~----------w~~~~~~~~l~~~~~~~l~------~------------------~~~~rvLd~G   53 (229)
T d2bzga1           8 LTLEEWQDKWVNGKTA----------FHQEQGHQLLKKHLDTFLK------G------------------KSGLRVFFPL   53 (229)
T ss_dssp             CCHHHHHHHHHHTCCT----------TCCTTCCHHHHHHHHHHHT------T------------------CCSCEEEETT
T ss_pred             CCHHHHHHHHccCCCC----------CccCCCCHHHHHHHHHhcC------C------------------CCCCEEEEeC
Confidence            4789999999763222          6666555667777765431      1                  2356899999


Q ss_pred             ccChHhHHHHHHCCCcc
Q 029423          173 TGNGLLLQELSKQGYTL  189 (193)
Q Consensus       173 CGNG~LL~eLak~GFs~  189 (193)
                      ||+|.++..|++.||..
T Consensus        54 CG~G~~a~~LA~~G~~V   70 (229)
T d2bzga1          54 CGKAVEMKWFADRGHSV   70 (229)
T ss_dssp             CTTCTHHHHHHHTTCEE
T ss_pred             CCCcHHHHHHHhCCCcE
Confidence            99999999999999965

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=98.12  E-value=9e-07  Score=68.10  Aligned_cols=24  Identities=33%  Similarity=0.576  Sum_probs=22.0

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|+.
T Consensus        43 ~~~vLDiGcG~G~~~~~l~~~~~~   66 (246)
T d2avna1          43 PCRVLDLGGGTGKWSLFLQERGFE   66 (246)
T ss_dssp             CCEEEEETCTTCHHHHHHHTTTCE
T ss_pred             CCEEEEECCCCchhcccccccceE
Confidence            468999999999999999999974

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=1.7e-07  Score=73.57  Aligned_cols=67  Identities=10%  Similarity=0.043  Sum_probs=41.9

Q ss_pred             CCCCcHHHHHHHHhhhhhhhccCCCCCceecCCchHHHHHHHHHhhhhhhccCcccccccccCCCccccccccCCCCcee
Q 029423           90 SMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVL  169 (193)
Q Consensus        90 S~LGtkeYWD~~Y~~EL~NF~e~gD~GEiWFGed~~d~vv~Wlk~~~~~i~q~~ip~~~d~~~~e~~e~~~k~~~~~sIL  169 (193)
                      +.+..++||+.+|.+-...|          +    .+..+.|+.+....+...                  ...+..+||
T Consensus         9 ~~f~~~~Y~~~~Y~~~~~~~----------~----~~~~~~~~~~~~~~~~~~------------------~~~~g~~vL   56 (257)
T d2a14a1           9 KHFLPRDYLATYYSFDGSPS----------P----EAEMLKFNLECLHKTFGP------------------GGLQGDTLI   56 (257)
T ss_dssp             HHCCHHHHHHHHCCCCCSCC----------H----HHHHHHHHHHHHHHHHST------------------TSCCEEEEE
T ss_pred             hhcChHHHHHHHhCcCcccc----------H----HHHHHHHHHHHHHHHhcc------------------cCCCCCEEE
Confidence            34567899999996533222          1    245566765543221110                  012356899


Q ss_pred             EeeccChHhHHHHHHCCCc
Q 029423          170 DIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       170 DLGCGNG~LL~eLak~GFs  188 (193)
                      |||||+|.+...|++.|+.
T Consensus        57 DlGcG~G~~~~~~~~~~~~   75 (257)
T d2a14a1          57 DIGSGPTIYQVLAACDSFQ   75 (257)
T ss_dssp             ESSCTTCCGGGTTGGGTEE
T ss_pred             EECCCCCHhHHHHhccccC
Confidence            9999999998888877763

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=98.07  E-value=2.7e-06  Score=66.27  Aligned_cols=24  Identities=38%  Similarity=0.682  Sum_probs=21.9

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|+.
T Consensus        42 ~~~iLDiGcGtG~~~~~l~~~~~~   65 (251)
T d1wzna1          42 VRRVLDLACGTGIPTLELAERGYE   65 (251)
T ss_dssp             CCEEEEETCTTCHHHHHHHHTTCE
T ss_pred             CCEEEEeCCCCCccchhhcccceE
Confidence            457999999999999999999984

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.74  E-value=2.5e-05  Score=63.26  Aligned_cols=25  Identities=28%  Similarity=0.543  Sum_probs=22.4

Q ss_pred             CCceeEeeccChHhHHHHHHCCCcc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYTL  189 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs~  189 (193)
                      ..+|||||||+|.++..|+++|+..
T Consensus        57 ~~~vLD~GcG~G~~~~~la~~g~~v   81 (292)
T d1xvaa_          57 CHRVLDVACGTGVDSIMLVEEGFSV   81 (292)
T ss_dssp             CCEEEESSCTTSHHHHHHHHTTCEE
T ss_pred             CCEEEEecCCCcHHHHHHHHcCCee
Confidence            3589999999999999999999853

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=1.1e-05  Score=62.83  Aligned_cols=25  Identities=24%  Similarity=0.339  Sum_probs=21.2

Q ss_pred             CCCceeEeeccChHhHHHHHHCCCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      .+.+|||||||+|.++..|++.++.
T Consensus        60 ~~~~vLDiGcG~G~~~~~l~~~~~~   84 (222)
T d2ex4a1          60 GTSCALDCGAGIGRITKRLLLPLFR   84 (222)
T ss_dssp             CCSEEEEETCTTTHHHHHTTTTTCS
T ss_pred             CCCEEEEeccCCCHhhHHHHHhcCC
Confidence            3568999999999999999877663

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.63  E-value=1.1e-05  Score=60.99  Aligned_cols=24  Identities=29%  Similarity=0.369  Sum_probs=22.0

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      +.+|||||||+|.++..|++.|+.
T Consensus        38 ~~~ILDiGcG~G~~~~~la~~~~~   61 (226)
T d1ve3a1          38 RGKVLDLACGVGGFSFLLEDYGFE   61 (226)
T ss_dssp             CCEEEEETCTTSHHHHHHHHTTCE
T ss_pred             CCEEEEECCCcchhhhhHhhhhcc
Confidence            568999999999999999999874

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=97.55  E-value=2.4e-05  Score=61.36  Aligned_cols=24  Identities=25%  Similarity=0.239  Sum_probs=21.9

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+|||||||+|.++..|++.|+.
T Consensus        38 ~~~vLDiGCG~G~~~~~l~~~g~~   61 (246)
T d1y8ca_          38 FDDYLDLACGTGNLTENLCPKFKN   61 (246)
T ss_dssp             TTEEEEETCTTSTTHHHHGGGSSE
T ss_pred             CCeEEEEeCcCCHHHHHHHHhCCc
Confidence            457999999999999999999974

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=97.27  E-value=9e-05  Score=60.92  Aligned_cols=26  Identities=38%  Similarity=0.496  Sum_probs=23.0

Q ss_pred             CCCceeEeeccChHhHHHHHHCCCcc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGYTL  189 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GFs~  189 (193)
                      +..+|||+|||.|.++..+++.|.+.
T Consensus       120 ~g~~VLDiGcGsG~l~i~aa~~g~~V  145 (254)
T d2nxca1         120 PGDKVLDLGTGSGVLAIAAEKLGGKA  145 (254)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHTTCEE
T ss_pred             ccCEEEEcccchhHHHHHHHhcCCEE
Confidence            46789999999999999999999753

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=97.20  E-value=0.00016  Score=56.02  Aligned_cols=22  Identities=18%  Similarity=0.311  Sum_probs=19.5

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      ++.+|||||||+|.++..|++.
T Consensus        39 ~~~~vLDlGCGtG~~~~~l~~~   60 (225)
T d1im8a_          39 ADSNVYDLGCSRGAATLSARRN   60 (225)
T ss_dssp             TTCEEEEESCTTCHHHHHHHHT
T ss_pred             CCCEEEEeccchhhHHHHHHHh
Confidence            3568999999999999999974

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=97.10  E-value=8.3e-05  Score=59.99  Aligned_cols=25  Identities=28%  Similarity=0.440  Sum_probs=21.5

Q ss_pred             CCCceeEeeccChHhHHHHHHCCCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ...+|||||||+|.+...|++.+|.
T Consensus        93 ~~~~vLD~GcG~G~~t~~ll~~~~~  117 (254)
T d1xtpa_          93 GTSRALDCGAGIGRITKNLLTKLYA  117 (254)
T ss_dssp             CCSEEEEETCTTTHHHHHTHHHHCS
T ss_pred             CCCeEEEecccCChhhHHHHhhcCc
Confidence            3568999999999999999887764

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00024  Score=56.59  Aligned_cols=21  Identities=29%  Similarity=0.439  Sum_probs=17.1

Q ss_pred             CCCceeEeeccChHhHHHHHH
Q 029423          164 SSWSVLDIGTGNGLLLQELSK  184 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak  184 (193)
                      ++.+|||||||.|.+...|++
T Consensus        40 ~~~~VLDiGcG~G~~~~~ll~   60 (280)
T d1jqea_          40 SEIKILSIGGGAGEIDLQILS   60 (280)
T ss_dssp             SEEEEEEETCTTSHHHHHHHH
T ss_pred             CCCeEEEEcCCCCHHHHHHHH
Confidence            345899999999998777655

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00022  Score=57.30  Aligned_cols=24  Identities=21%  Similarity=0.340  Sum_probs=17.5

Q ss_pred             CCCceeEeeccChHhHHHHHHCCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      +..+|||||||+|.+...++..++
T Consensus        54 ~g~~vLDiGcG~g~~~~~~~~~~~   77 (263)
T d2g72a1          54 SGRTLIDIGSGPTVYQLLSACSHF   77 (263)
T ss_dssp             CCSEEEEETCTTCCGGGTTGGGGC
T ss_pred             CCcEEEEeccCCCHHHHHHhcccC
Confidence            356899999999987654444444

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.85  E-value=0.00019  Score=57.46  Aligned_cols=25  Identities=28%  Similarity=0.384  Sum_probs=21.5

Q ss_pred             CCCceeEeeccChHhHHHHHHC-CCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ-GYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~-GFs  188 (193)
                      +..+|||||||+|.++..|++. |.+
T Consensus        67 ~~~~vLDiGcG~G~~~~~la~~~~~~   92 (282)
T d2o57a1          67 RQAKGLDLGAGYGGAARFLVRKFGVS   92 (282)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCCE
T ss_pred             CCCEEEEeCCCCcHHHhhhhccCCcE
Confidence            3579999999999999999986 654

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.77  E-value=0.00029  Score=56.21  Aligned_cols=25  Identities=40%  Similarity=0.489  Sum_probs=22.3

Q ss_pred             CCCceeEeeccChHhHHHHHHCCCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ...+|||||||+|.|+..+++.|..
T Consensus        48 ~Gk~VLDlGcGtG~l~i~a~~~ga~   72 (197)
T d1ne2a_          48 GGRSVIDAGTGNGILACGSYLLGAE   72 (197)
T ss_dssp             BTSEEEEETCTTCHHHHHHHHTTBS
T ss_pred             CCCEEEEeCCCCcHHHHHHHHcCCC
Confidence            4568999999999999999999875

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.71  E-value=0.00034  Score=57.29  Aligned_cols=25  Identities=36%  Similarity=0.512  Sum_probs=22.2

Q ss_pred             CCCceeEeeccChHhHHHHHHCCCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ++.+|||||||.|.|...+++.|..
T Consensus        35 ~~~~VLDiGcG~G~lsl~aa~~Ga~   59 (311)
T d2fyta1          35 KDKVVLDVGCGTGILSMFAAKAGAK   59 (311)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHTTCS
T ss_pred             CcCEEEEECCCCCHHHHHHHHcCCC
Confidence            4568999999999999999999873

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.68  E-value=0.00035  Score=54.65  Aligned_cols=25  Identities=32%  Similarity=0.638  Sum_probs=20.9

Q ss_pred             CCCceeEeeccChHhHHHHHHC-CCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ-GYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~-GFs  188 (193)
                      +..+|||||||+|.+...|++. |.+
T Consensus        33 pg~~VLDiGCG~G~~~~~la~~~~~~   58 (245)
T d1nkva_          33 PGTRILDLGSGSGEMLCTWARDHGIT   58 (245)
T ss_dssp             TTCEEEEETCTTCHHHHHHHHHTCCE
T ss_pred             CCCEEEEEcCCCCHHHHHHHHhcCCE
Confidence            4578999999999999999875 543

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.62  E-value=0.00045  Score=57.13  Aligned_cols=25  Identities=36%  Similarity=0.520  Sum_probs=22.3

Q ss_pred             CCCceeEeeccChHhHHHHHHCCCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ++.+|||||||.|.|++.+++.|..
T Consensus        38 ~~~~VLDlGcGtG~ls~~aa~~Ga~   62 (328)
T d1g6q1_          38 KDKIVLDVGCGTGILSMFAAKHGAK   62 (328)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHTCCS
T ss_pred             CcCEEEEeCCCCCHHHHHHHHhCCC
Confidence            3568999999999999999999974

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.62  E-value=0.00041  Score=57.23  Aligned_cols=25  Identities=36%  Similarity=0.542  Sum_probs=21.8

Q ss_pred             CCCceeEeeccChHhHHHHHHCCCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ++..|||||||.|.|++.+++.|-.
T Consensus        33 ~~~~VLDiGcG~G~ls~~aa~~Ga~   57 (316)
T d1oria_          33 KDKVVLDVGSGTGILCMFAAKAGAR   57 (316)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHTTCS
T ss_pred             CcCEEEEEecCCcHHHHHHHHhCCC
Confidence            3567999999999999999999853

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.61  E-value=0.00042  Score=52.76  Aligned_cols=25  Identities=24%  Similarity=0.247  Sum_probs=21.7

Q ss_pred             CCCCceeEeeccChHhHHHHHHCCC
Q 029423          163 LSSWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       163 ~~~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      .+..+|||||||.|.++..|++.+-
T Consensus        32 ~~g~~VLDiGcGsG~~s~~lA~~~~   56 (186)
T d1l3ia_          32 GKNDVAVDVGCGTGGVTLELAGRVR   56 (186)
T ss_dssp             CTTCEEEEESCTTSHHHHHHHTTSS
T ss_pred             CCCCEEEEEECCeEcccccccccce
Confidence            3467899999999999999998764

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=96.56  E-value=0.00082  Score=51.30  Aligned_cols=25  Identities=24%  Similarity=0.276  Sum_probs=22.3

Q ss_pred             CCceeEeeccChHhHHHHHHCCCcc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYTL  189 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs~  189 (193)
                      +.+|||+|||+|.++++.++.|...
T Consensus        42 g~~vLDl~~G~G~~~i~a~~~ga~v   66 (171)
T d1ws6a1          42 RGRFLDPFAGSGAVGLEAASEGWEA   66 (171)
T ss_dssp             CCEEEEETCSSCHHHHHHHHTTCEE
T ss_pred             CCeEEEeccccchhhhhhhhccchh
Confidence            5689999999999999999998753

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=96.52  E-value=0.00034  Score=52.91  Aligned_cols=20  Identities=25%  Similarity=0.336  Sum_probs=17.4

Q ss_pred             CCceeEeeccChHhHHHHHH
Q 029423          165 SWSVLDIGTGNGLLLQELSK  184 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak  184 (193)
                      ..+|||||||+|.++..|++
T Consensus        37 ~~~vLDiGcG~G~~~~~~~~   56 (208)
T d1vlma_          37 EGRGVEIGVGTGRFAVPLKI   56 (208)
T ss_dssp             SSCEEEETCTTSTTHHHHTC
T ss_pred             CCeEEEECCCCcccccccce
Confidence            35799999999999998865

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.51  E-value=0.00038  Score=53.22  Aligned_cols=25  Identities=24%  Similarity=0.403  Sum_probs=21.4

Q ss_pred             CCCceeEeeccChHhHHHHHHCCCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      +..+|||||||+|.++..|++.+..
T Consensus        52 ~~~~VLDiGcG~G~~~~~la~~~~~   76 (194)
T d1dusa_          52 KDDDILDLGCGYGVIGIALADEVKS   76 (194)
T ss_dssp             TTCEEEEETCTTSHHHHHHGGGSSE
T ss_pred             CCCeEEEEeecCChhHHHHHhhccc
Confidence            3568999999999999999987653

>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.50  E-value=0.00057  Score=54.09  Aligned_cols=21  Identities=24%  Similarity=0.534  Sum_probs=19.1

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      +.-|||||||+|.++..||+.
T Consensus        32 ~plvLdIGcG~G~~~~~lA~~   52 (204)
T d1yzha1          32 NPIHVEVGSGKGAFVSGMAKQ   52 (204)
T ss_dssp             CCEEEEESCTTSHHHHHHHHH
T ss_pred             CCeEEEEeccCCHHHHHHHHH
Confidence            457999999999999999986

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=96.47  E-value=0.00058  Score=55.02  Aligned_cols=25  Identities=28%  Similarity=0.412  Sum_probs=21.6

Q ss_pred             CCCceeEeeccChHhHHHHHHCCCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      +..+|||||||+|.++..|++.+..
T Consensus        84 ~~~~iLDiGcG~G~~~~~l~~~~~~  108 (268)
T d1p91a_          84 KATAVLDIGCGEGYYTHAFADALPE  108 (268)
T ss_dssp             TCCEEEEETCTTSTTHHHHHHTCTT
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHCCC
Confidence            3568999999999999999998643

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.34  E-value=0.00096  Score=52.25  Aligned_cols=25  Identities=28%  Similarity=0.340  Sum_probs=22.0

Q ss_pred             CCCceeEeeccChHhHHHHHHCCCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      +..+|||+|||+|.|+.+++..|..
T Consensus        46 ~g~~vLDlg~GtG~l~i~a~~~g~~   70 (201)
T d1wy7a1          46 EGKVVADLGAGTGVLSYGALLLGAK   70 (201)
T ss_dssp             TTCEEEEETCTTCHHHHHHHHTTCS
T ss_pred             CCCEEEECcCcchHHHHHHHHcCCC
Confidence            4678999999999999999999863

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.29  E-value=0.0012  Score=54.79  Aligned_cols=22  Identities=23%  Similarity=0.468  Sum_probs=19.3

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||.|.+...|++.
T Consensus        62 ~G~~VLDiGCG~G~~a~~~a~~   83 (285)
T d1kpga_          62 PGMTLLDVGCGWGATMMRAVEK   83 (285)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHH
T ss_pred             CCCEEEEecCcchHHHHHHHhc
Confidence            4678999999999999988875

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.27  E-value=0.0013  Score=54.60  Aligned_cols=24  Identities=25%  Similarity=0.430  Sum_probs=20.4

Q ss_pred             CCCceeEeeccChHhHHHHHHC-CC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ-GY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~-GF  187 (193)
                      +..+|||||||.|.++..|++. |.
T Consensus        61 ~G~~VLDiGCG~G~~~~~~a~~~g~   85 (291)
T d1kpia_          61 PGMTLLDIGCGWGSTMRHAVAEYDV   85 (291)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCC
T ss_pred             CCCEEEEecCcchHHHHHHHHhcCc
Confidence            4678999999999999999864 54

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=96.08  E-value=0.0013  Score=52.19  Aligned_cols=22  Identities=27%  Similarity=0.557  Sum_probs=19.6

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.++..|++..
T Consensus        81 ~~~VLDvGcG~G~~~~~la~~~  102 (253)
T d1tw3a2          81 VRHVLDVGGGKGGFAAAIARRA  102 (253)
T ss_dssp             CSEEEEETCTTSHHHHHHHHHC
T ss_pred             CCEEEEeCCCCCHHHHHHHHhc
Confidence            3579999999999999999874

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.08  E-value=0.0012  Score=52.99  Aligned_cols=24  Identities=13%  Similarity=0.192  Sum_probs=21.3

Q ss_pred             CCCCceeEeeccChHhHHHHHHCC
Q 029423          163 LSSWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       163 ~~~~sILDLGCGNG~LL~eLak~G  186 (193)
                      .+..+|||||||+|.+...|++.+
T Consensus        73 kpG~~VLDlGcGsG~~~~~la~~~   96 (230)
T d1g8sa_          73 KRDSKILYLGASAGTTPSHVADIA   96 (230)
T ss_dssp             CTTCEEEEESCCSSHHHHHHHHHT
T ss_pred             CCCCEEEEeCEEcCHHHHHHHHhC
Confidence            356789999999999999999975

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.06  E-value=0.0013  Score=51.89  Aligned_cols=23  Identities=22%  Similarity=0.296  Sum_probs=20.1

Q ss_pred             CCCCceeEeeccChHhHHHHHHC
Q 029423          163 LSSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       163 ~~~~sILDLGCGNG~LL~eLak~  185 (193)
                      .+..+|||||||+|.+...|++.
T Consensus        55 kpg~~VLDlGcG~G~~~~~la~~   77 (209)
T d1nt2a_          55 RGDERVLYLGAASGTTVSHLADI   77 (209)
T ss_dssp             CSSCEEEEETCTTSHHHHHHHHH
T ss_pred             CCCCEEEEeCCcCCHHHHHHHHh
Confidence            35679999999999999999974

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.05  E-value=0.0012  Score=51.68  Aligned_cols=22  Identities=18%  Similarity=0.333  Sum_probs=19.8

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||||||+|.+...|++.+
T Consensus        54 g~~VLdIGcG~G~~a~~~a~~~   75 (229)
T d1zx0a1          54 GGRVLEVGFGMAIAASKVQEAP   75 (229)
T ss_dssp             CEEEEEECCTTSHHHHHHHTSC
T ss_pred             CCeEEEeeccchHHHHHHHHcC
Confidence            4589999999999999999875

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.97  E-value=0.0015  Score=53.61  Aligned_cols=25  Identities=24%  Similarity=0.449  Sum_probs=21.3

Q ss_pred             CCCceeEeeccChHhHHHHHHC-CCc
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ-GYT  188 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~-GFs  188 (193)
                      +..+|||||||.|.++..|++. |..
T Consensus        52 ~g~~VLDiGCG~G~~a~~~a~~~g~~   77 (280)
T d2fk8a1          52 PGMTLLDIGCGWGTTMRRAVERFDVN   77 (280)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHCCE
T ss_pred             CCCEEEEecCCchHHHHHHHHhCcee
Confidence            4678999999999999999876 654

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.83  E-value=0.0033  Score=55.02  Aligned_cols=22  Identities=18%  Similarity=0.355  Sum_probs=19.6

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      ++.+|||||||+|.+++.+++.
T Consensus       216 pgd~fLDLGCG~G~~vl~aA~~  237 (406)
T d1u2za_         216 KGDTFMDLGSGVGNCVVQAALE  237 (406)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHH
T ss_pred             CCCEEEeCCCCCcHHHHHHHHH
Confidence            4678999999999999999975

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=95.65  E-value=0.0036  Score=47.96  Aligned_cols=24  Identities=25%  Similarity=0.104  Sum_probs=22.1

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      +.+||||+||+|.++++.+.+|..
T Consensus        44 ~~~vLDlfaGsG~~giealsrGa~   67 (183)
T d2fpoa1          44 DAQCLDCFAGSGALGLEALSRYAA   67 (183)
T ss_dssp             TCEEEETTCTTCHHHHHHHHTTCS
T ss_pred             hhhhhhhhccccceeeeEEecCcc
Confidence            568999999999999999999985

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.46  E-value=0.0033  Score=49.27  Aligned_cols=22  Identities=32%  Similarity=0.493  Sum_probs=19.6

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||+|.+...|++.
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~   96 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRV   96 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHH
T ss_pred             ccceEEEecCccchhHHHHHHH
Confidence            4679999999999999999875

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=95.30  E-value=0.0031  Score=50.43  Aligned_cols=20  Identities=40%  Similarity=0.690  Sum_probs=18.6

Q ss_pred             CceeEeeccChHhHHHHHHC
Q 029423          166 WSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~  185 (193)
                      .+|||||||+|.++..|++.
T Consensus        83 ~~vlDvG~G~G~~~~~l~~~  102 (256)
T d1qzza2          83 RHVLDVGGGNGGMLAAIALR  102 (256)
T ss_dssp             CEEEEETCTTSHHHHHHHHH
T ss_pred             CEEEEECCCCCHHHHHHHHh
Confidence            47999999999999999986

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.21  E-value=0.004  Score=51.81  Aligned_cols=24  Identities=17%  Similarity=0.369  Sum_probs=20.2

Q ss_pred             CCCceeEeeccChHhHHHHHHC-CC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ-GY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~-GF  187 (193)
                      ++..|||||||+|.++..+++. |.
T Consensus       151 ~~~~vlD~GcG~G~~~~~~a~~~~~  175 (328)
T d1nw3a_         151 DDDLFVDLGSGVGQVVLQVAAATNC  175 (328)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHCCC
T ss_pred             CCCEEEEcCCCCCHHHHHHHHHhCC
Confidence            3668999999999999999864 54

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.68  E-value=0.0073  Score=49.77  Aligned_cols=23  Identities=30%  Similarity=0.495  Sum_probs=20.7

Q ss_pred             CCCCceeEeeccChHhHHHHHHC
Q 029423          163 LSSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       163 ~~~~sILDLGCGNG~LL~eLak~  185 (193)
                      .+..+|||+|||+|.|...|++.
T Consensus        95 ~PG~~VLE~G~GsG~lt~~La~~  117 (264)
T d1i9ga_          95 FPGARVLEAGAGSGALTLSLLRA  117 (264)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEecCcCCcHHHHHHHHh
Confidence            45789999999999999999986

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.60  E-value=0.0072  Score=48.38  Aligned_cols=27  Identities=26%  Similarity=0.303  Sum_probs=22.4

Q ss_pred             CCCCceeEeeccChHhHHHHHHC-CCcc
Q 029423          163 LSSWSVLDIGTGNGLLLQELSKQ-GYTL  189 (193)
Q Consensus       163 ~~~~sILDLGCGNG~LL~eLak~-GFs~  189 (193)
                      .+..+|||||||+|.+...|++. |=+|
T Consensus        72 ~pG~~VLDlGaGsG~~t~~la~~VG~~G   99 (227)
T d1g8aa_          72 KPGKSVLYLGIASGTTASHVSDIVGWEG   99 (227)
T ss_dssp             CTTCEEEEETTTSTTHHHHHHHHHCTTS
T ss_pred             CCCCEEEEeccCCCHHHHHHHHHhCCCC
Confidence            35679999999999999999985 5444

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=94.55  E-value=0.0076  Score=48.32  Aligned_cols=24  Identities=29%  Similarity=0.339  Sum_probs=21.1

Q ss_pred             CCCceeEeeccChHhHHHHHHCCC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      +..+|||||||+|.+..-|++.+-
T Consensus        70 ~g~~VLdIG~GsGy~ta~La~l~~   93 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTALIAEIVD   93 (224)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHSS
T ss_pred             ccceEEEecCCCCHHHHHHHHHhc
Confidence            467899999999999999998764

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.46  E-value=0.0086  Score=47.41  Aligned_cols=22  Identities=27%  Similarity=0.581  Sum_probs=19.1

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||+|.+..-|++.
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l   97 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARM   97 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHH
T ss_pred             CCCeEEEecCCCCHHHHHHHHH
Confidence            4678999999999998888874

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=94.42  E-value=0.0092  Score=48.63  Aligned_cols=23  Identities=17%  Similarity=0.368  Sum_probs=20.4

Q ss_pred             CCCCceeEeeccChHhHHHHHHC
Q 029423          163 LSSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       163 ~~~~sILDLGCGNG~LL~eLak~  185 (193)
                      .+..+|||+|||.|.|...|++.
T Consensus        84 ~pG~rVLEiG~GsG~lt~~la~~  106 (250)
T d1yb2a1          84 RPGMDILEVGVGSGNMSSYILYA  106 (250)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHH
T ss_pred             CCcCEEEEeeeeCcHHHHHHHHH
Confidence            45689999999999999999975

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=94.28  E-value=0.01  Score=48.45  Aligned_cols=23  Identities=22%  Similarity=0.427  Sum_probs=20.5

Q ss_pred             CCCCceeEeeccChHhHHHHHHC
Q 029423          163 LSSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       163 ~~~~sILDLGCGNG~LL~eLak~  185 (193)
                      .+..+|||+|||+|.|...|++.
T Consensus       102 ~pG~~VLDiG~GsG~lt~~lA~~  124 (266)
T d1o54a_         102 KEGDRIIDTGVGSGAMCAVLARA  124 (266)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCHHHHHHHHH
Confidence            45679999999999999999976

>d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria monocytogenes [TaxId: 1639]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N-6 DNA Methylase-like
domain: Hypothetical protein Lmo1582
species: Listeria monocytogenes [TaxId: 1639]

Probab=94.23  E-value=0.027  Score=45.68  Aligned_cols=20  Identities=30%  Similarity=0.385  Sum_probs=17.7

Q ss_pred             CCceeEeeccChHhHHHHHH
Q 029423          165 SWSVLDIGTGNGLLLQELSK  184 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak  184 (193)
                      ..+|||.+||.|.||.++++
T Consensus       118 ~~~vlDp~~GsG~~l~~~~~  137 (328)
T d2f8la1         118 NVSILDPACGTANLLTTVIN  137 (328)
T ss_dssp             EEEEEETTCTTSHHHHHHHH
T ss_pred             CCEEEeCCCCcchhHHHHHH
Confidence            46899999999999999875

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.09  E-value=0.013  Score=44.83  Aligned_cols=24  Identities=29%  Similarity=0.336  Sum_probs=22.1

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      +.+||||+||+|.|+++.+..|..
T Consensus        42 ~~~vLDlfaGsG~~g~ea~srGa~   65 (182)
T d2fhpa1          42 GGMALDLYSGSGGLAIEAVSRGMD   65 (182)
T ss_dssp             SCEEEETTCTTCHHHHHHHHTTCS
T ss_pred             CCEEEEcccccccccceeeecchh
Confidence            568999999999999999999975

>d1kyza2 c.66.1.12 (A:120-362) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=93.39  E-value=0.015  Score=46.11  Aligned_cols=20  Identities=25%  Similarity=0.612  Sum_probs=18.6

Q ss_pred             CceeEeeccChHhHHHHHHC
Q 029423          166 WSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~  185 (193)
                      .+|||||||+|.++.+|++.
T Consensus        83 ~~vvDvGGG~G~~~~~l~~~  102 (243)
T d1kyza2          83 KSLVDVGGGTGAVINTIVSK  102 (243)
T ss_dssp             SEEEEETCTTSHHHHHHHHH
T ss_pred             cEEEEecCCCcHHHHHHHHH
Confidence            57999999999999999986

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.36  E-value=0.018  Score=48.40  Aligned_cols=23  Identities=35%  Similarity=0.372  Sum_probs=20.4

Q ss_pred             CCCCceeEeeccChHhHHHHHHC
Q 029423          163 LSSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       163 ~~~~sILDLGCGNG~LL~eLak~  185 (193)
                      .+..+|||+|||+|.|...|++.
T Consensus        97 ~pG~rVLE~GtGsG~lt~~LAr~  119 (324)
T d2b25a1          97 NPGDTVLEAGSGSGGMSLFLSKA  119 (324)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEecccccHHHHHHHHH
Confidence            35679999999999999999985

>d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Chalcone O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=93.23  E-value=0.014  Score=46.80  Aligned_cols=21  Identities=24%  Similarity=0.441  Sum_probs=18.9

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|.++.+|++.
T Consensus        82 ~~~vlDiGGG~G~~~~~l~~~  102 (244)
T d1fp1d2          82 ISTLVDVGGGSGRNLELIISK  102 (244)
T ss_dssp             CSEEEEETCTTSHHHHHHHHH
T ss_pred             CcEEEEecCCCcHHHHHHHHH
Confidence            357999999999999999986

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=92.14  E-value=0.033  Score=45.79  Aligned_cols=21  Identities=33%  Similarity=0.672  Sum_probs=19.1

Q ss_pred             CCceeEeeccChHhHHHHHHC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~  185 (193)
                      ..+|||||||+|-++..|++.
T Consensus       109 ~~~vlDlGtGSG~I~i~la~~  129 (274)
T d2b3ta1         109 PCRILDLGTGTGAIALALASE  129 (274)
T ss_dssp             CCEEEEETCTTSHHHHHHHHH
T ss_pred             ccceeeeehhhhHHHHHHHhh
Confidence            568999999999999999875

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.97  E-value=0.026  Score=45.75  Aligned_cols=23  Identities=26%  Similarity=0.222  Sum_probs=20.9

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||+|||.|.+...+++.|-
T Consensus       108 g~~VlD~~aG~G~~~l~~a~~~~  130 (260)
T d2frna1         108 DELVVDMFAGIGHLSLPIAVYGK  130 (260)
T ss_dssp             TCEEEETTCTTTTTHHHHHHHTC
T ss_pred             ccEEEECcceEcHHHHHHHHhCC
Confidence            56899999999999999999875

>d1fp2a2 c.66.1.12 (A:109-352) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Isoflavone O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=91.61  E-value=0.031  Score=44.70  Aligned_cols=20  Identities=25%  Similarity=0.483  Sum_probs=18.4

Q ss_pred             CceeEeeccChHhHHHHHHC
Q 029423          166 WSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       166 ~sILDLGCGNG~LL~eLak~  185 (193)
                      .+|||||||+|.++..|++.
T Consensus        82 ~~vvDvGGG~G~~~~~l~~~  101 (244)
T d1fp2a2          82 ESIVDVGGGTGTTAKIICET  101 (244)
T ss_dssp             SEEEEETCTTSHHHHHHHHH
T ss_pred             eEEEEecCCccHHHHHHHHh
Confidence            47999999999999999886

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=91.28  E-value=0.05  Score=43.08  Aligned_cols=22  Identities=27%  Similarity=0.526  Sum_probs=18.4

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+||+||||.|.+..-|++.
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l  101 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRY  101 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHH
T ss_pred             CCCeEEEecCCCCHHHHHHHHH
Confidence            4678999999999988777763

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.83  E-value=0.063  Score=42.47  Aligned_cols=22  Identities=27%  Similarity=0.504  Sum_probs=19.6

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+||+||||.|.+..-|++.
T Consensus        78 ~g~~VLeIGsGsGY~taila~l   99 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEI   99 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHH
T ss_pred             ccceEEEecCCCChhHHHHHHh
Confidence            4678999999999999999875

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.64  E-value=0.089  Score=43.31  Aligned_cols=23  Identities=26%  Similarity=0.111  Sum_probs=21.1

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+|||+|||+|.++..+++.|-
T Consensus       146 g~~VLDl~~g~G~~si~~a~~ga  168 (324)
T d2as0a2         146 GDRVLDVFTYTGGFAIHAAIAGA  168 (324)
T ss_dssp             TCEEEETTCTTTHHHHHHHHTTC
T ss_pred             CCeeecccCcccchhhhhhhcCC
Confidence            56899999999999999999885

>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Methyltransferase 10 domain
domain: Methyltransferase 10 domain containing protein METT10D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.47  E-value=0.053  Score=43.41  Aligned_cols=22  Identities=27%  Similarity=0.364  Sum_probs=19.3

Q ss_pred             CCCceeEeeccChHhHHHHHHC
Q 029423          164 SSWSVLDIGTGNGLLLQELSKQ  185 (193)
Q Consensus       164 ~~~sILDLGCGNG~LL~eLak~  185 (193)
                      +..+|||||||.|-....|++.
T Consensus        61 ~~~~~LDiGtGsg~I~~~l~~~   82 (250)
T d2h00a1          61 TLRRGIDIGTGASCIYPLLGAT   82 (250)
T ss_dssp             CCCEEEEESCTTTTHHHHHHHH
T ss_pred             ccceEEEeCCCchHHHHHHHHh
Confidence            3568999999999999999875

>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: (Uracil-5-)-methyltransferase
domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=89.70  E-value=0.13  Score=41.73  Aligned_cols=23  Identities=30%  Similarity=0.245  Sum_probs=20.2

Q ss_pred             CCceeEeeccChHhHHHHHHCCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGY  187 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GF  187 (193)
                      ..+||||-||.|.|+..|++.+-
T Consensus       213 ~~~vlDLycG~G~fsl~La~~~~  235 (358)
T d1uwva2         213 EDRVLDLFCGMGNFTLPLATQAA  235 (358)
T ss_dssp             TCEEEEESCTTTTTHHHHHTTSS
T ss_pred             CceEEEecccccccchhcccccc
Confidence            45899999999999999998753

>d2ifta1 c.66.1.46 (A:11-193) Putative methylase HI0767 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase HI0767
species: Haemophilus influenzae [TaxId: 727]

Probab=85.09  E-value=0.19  Score=37.80  Aligned_cols=24  Identities=25%  Similarity=0.065  Sum_probs=21.8

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+||||-||+|.|+++...+|-.
T Consensus        44 ~~~vLDlFaGsG~~glEalSRGA~   67 (183)
T d2ifta1          44 QSECLDGFAGSGSLGFEALSRQAK   67 (183)
T ss_dssp             TCEEEETTCTTCHHHHHHHHTTCS
T ss_pred             cceEeecccCccceeeeeeeecce
Confidence            468999999999999999999974

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=84.55  E-value=0.13  Score=42.36  Aligned_cols=22  Identities=18%  Similarity=-0.022  Sum_probs=19.4

Q ss_pred             CCceeEeeccChHhHHHHHHCC
Q 029423          165 SWSVLDIGTGNGLLLQELSKQG  186 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~G  186 (193)
                      ..+|||++||.|.++..|+..|
T Consensus       146 g~rVLDl~~gtG~~s~~~a~g~  167 (318)
T d1wxxa2         146 GERALDVFSYAGGFALHLALGF  167 (318)
T ss_dssp             EEEEEEETCTTTHHHHHHHHHE
T ss_pred             CCeeeccCCCCcHHHHHHHhcC
Confidence            4689999999999999998754

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=83.63  E-value=0.27  Score=41.03  Aligned_cols=24  Identities=17%  Similarity=0.108  Sum_probs=21.8

Q ss_pred             CCceeEeeccChHhHHHHHHCCCc
Q 029423          165 SWSVLDIGTGNGLLLQELSKQGYT  188 (193)
Q Consensus       165 ~~sILDLGCGNG~LL~eLak~GFs  188 (193)
                      ..+||||+||+|.++..+++.|-+
T Consensus       133 ~~rVLdlf~~tG~~sl~aa~~GA~  156 (309)
T d2igta1         133 PLKVLNLFGYTGVASLVAAAAGAE  156 (309)
T ss_dssp             CCEEEEETCTTCHHHHHHHHTTCE
T ss_pred             CCeEEEecCCCcHHHHHHHhCCCe
Confidence            568999999999999999999864