Citrus Sinensis ID: 029650

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

MDAKRKNKMVKVVKKEEATAAFVDSDDDDDDGGEYDLCPQEEGDDNRNSSSKKNKGSSGGSGLRSCQVDKCGADLSDAKQYHRRHKVCEVHAKAQVVLMGGIRQRFCQQCSRFHELSEFDETKRSCRRRLAGHNERRRKNAAESNGEGSSCKGTGTGTQLKDLVCGKLDDKGRIKISIQENATCKHFQIR

ccHHHHccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccEEEEccEEEEEccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccc

*******************************************************************VDKCGADLSDAKQYHRRHKVCEVHAKAQVVLMGGIRQRFCQQCSRFHELSEFDETKR************************************KD*******DKGRIKISIQENATC******

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MDAKRKNKMVKVVKKEEATAAFVDSDDDDDDGGEYDLCPQEEGDDNRNSSSKKNKGSSGGSGLRSCQVDKCGADLSDAKQYHRRHKVCEVHAKAQVVLMGGIRQRFCQQCSRFHELSEFDETKRSCRRRLAGHNERRRKNAAESNGEGSSCKGTGTGTQLKDLVCGKLDDKGRIKISIQENATCKHFQIR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Squamosa promoter-binding-like protein 4	Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' of AP1 promoter. Promotes both vegetative phase change and flowering.	probable	Q9S7A9

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1UL4, chain A
Confidence level:very confident
Coverage over the Query: 63-143
View the alignment between query and template
View the model in PyMOL