Citrus Sinensis ID: 029671

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
MNGKEILQKMKVKAGFCTSALDTGKGKSKMSKHITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIPGSSF
cccccccHHHccccccccccccccccccccccccEEEEEEEccccccccccEEEEEEcccccccEEEEEEEcccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEccEEEEEEcccccEEEEEccEEEccccccccccHHHHHHHcccEEEEEccccc
ccHHHHHHHHHHHccccccccccccccccccccEEEEEEEccccccccccHcEEEEEEccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHcccHcHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEcccEEEEEEcccccEEEEEccEEEEccccccccHHHHHHHHcccEEEEcccccc
MNGKEILQKMKVKAGfctsaldtgkgkskmskhithgyhlvkgksnhAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLfdnilkepdfwtdTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGvakqlsvdhepskekrliesrggfvsnipgssf
MNGKEILQKMKVKAGFCTSALdtgkgkskmsKHITHGyhlvkgksnHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVIskngvakqlsvdhepskekrliesrggfvsnipgssf
MNGKEILQKMKVKAGFCTSALDTGKGKSKMSKHITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIPGSSF
*************AGFCT**************HITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVIS************************************
**GKE*****************************THGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQAF**GKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIPGS**
MNGKEILQKMKVKAGFCTSALD*********KHITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQ************LIESRGGFVSNIPGSSF
***********VKA*****************KHITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIP****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNGKEILQKMKVKAGFCTSALDTGKGKSKMSKHITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIPGSSF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query190 2.2.26 [Sep-21-2011]
Q93YW5283 Probable protein phosphat yes no 0.984 0.660 0.775 9e-80
Q9SIU8 290 Probable protein phosphat no no 0.963 0.631 0.732 3e-73
Q9LDA7289 Probable protein phosphat no no 0.984 0.647 0.683 1e-71
Q0D673290 Probable protein phosphat yes no 0.984 0.644 0.678 1e-69
Q0JAA0321 Probable protein phosphat no no 0.963 0.570 0.564 4e-55
Q9LME4281 Probable protein phosphat no no 0.810 0.548 0.610 7e-50
O64583339 Probable protein phosphat no no 0.821 0.460 0.594 2e-49
Q7XQU7284 Probable protein phosphat no no 0.868 0.580 0.584 4e-49
Q9S9Z7282 Probable protein phosphat no no 0.863 0.581 0.593 2e-48
Q8L7I4283 Probable protein phosphat no no 0.868 0.583 0.579 2e-46
>sp|Q93YW5|P2C58_ARATH Probable protein phosphatase 2C 58 OS=Arabidopsis thaliana GN=At4g28400 PE=1 SV=1 Back     alignment and function desciption
 Score =  295 bits (756), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 145/187 (77%), Positives = 163/187 (87%)

Query: 1   MNGKEILQKMKVKAGFCTSALDTGKGKSKMSKHITHGYHLVKGKSNHAMEDYLVSEFKQE 60
           M G  IL K+K+KAGFC SA D G+GKSKM K+ITHG+H VKGKS+H MEDY+VSEFK+ 
Sbjct: 1   MAGSNILHKIKLKAGFCGSAPDMGRGKSKMWKNITHGFHCVKGKSSHPMEDYVVSEFKKL 60

Query: 61  KDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQA 120
           + +ELGLFAIFDGHLGHDVA YLQT+LFDNILKE DFWTDTE+AIR AY  TD  IL+Q+
Sbjct: 61  EGHELGLFAIFDGHLGHDVAKYLQTNLFDNILKEKDFWTDTENAIRNAYRSTDAVILQQS 120

Query: 121 FVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGG 180
             LGKGGSTAVT ILI+G+KLVVANVGDSRAV+SKNGVA QLSVDHEPSKEK+ IESRGG
Sbjct: 121 LKLGKGGSTAVTGILIDGKKLVVANVGDSRAVMSKNGVAHQLSVDHEPSKEKKEIESRGG 180

Query: 181 FVSNIPG 187
           FVSNIPG
Sbjct: 181 FVSNIPG 187

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q9SIU8|P2C20_ARATH Probable protein phosphatase 2C 20 OS=Arabidopsis thaliana GN=PPC3-1.2 PE=1 SV=3 Back     alignment and function description
>sp|Q9LDA7|P2C39_ARATH Probable protein phosphatase 2C 39 OS=Arabidopsis thaliana GN=At3g15260 PE=2 SV=1 Back     alignment and function description
>sp|Q0D673|P2C62_ORYSJ Probable protein phosphatase 2C 62 OS=Oryza sativa subsp. japonica GN=Os07g0507000 PE=2 SV=1 Back     alignment and function description
>sp|Q0JAA0|P2C44_ORYSJ Probable protein phosphatase 2C 44 OS=Oryza sativa subsp. japonica GN=Os04g0609600 PE=2 SV=1 Back     alignment and function description
>sp|Q9LME4|P2C09_ARATH Probable protein phosphatase 2C 9 OS=Arabidopsis thaliana GN=At1g22280 PE=1 SV=1 Back     alignment and function description
>sp|O64583|P2C28_ARATH Probable protein phosphatase 2C 28 OS=Arabidopsis thaliana GN=At2g34740 PE=2 SV=2 Back     alignment and function description
>sp|Q7XQU7|P2C41_ORYSJ Probable protein phosphatase 2C 41 OS=Oryza sativa subsp. japonica GN=Os04g0452000 PE=2 SV=2 Back     alignment and function description
>sp|Q9S9Z7|P2C10_ARATH Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana GN=At1g34750 PE=1 SV=1 Back     alignment and function description
>sp|Q8L7I4|P2C17_ARATH Probable protein phosphatase 2C 17 OS=Arabidopsis thaliana GN=At1g78200 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query190
255553671283 protein phosphatase 2c, putative [Ricinu 0.984 0.660 0.855 4e-89
224133470286 predicted protein [Populus trichocarpa] 0.973 0.646 0.849 8e-86
147796432283 hypothetical protein VITISV_029655 [Viti 0.984 0.660 0.775 5e-81
225461504283 PREDICTED: probable protein phosphatase 0.984 0.660 0.775 6e-81
225446422283 PREDICTED: probable protein phosphatase 0.984 0.660 0.775 8e-81
356542975281 PREDICTED: probable protein phosphatase 0.973 0.658 0.780 2e-79
297803242285 hypothetical protein ARALYDRAFT_491931 [ 0.984 0.656 0.775 2e-78
18417190283 putative protein phosphatase 2C 58 [Arab 0.984 0.660 0.775 5e-78
312282095282 unnamed protein product [Thellungiella h 0.973 0.656 0.775 2e-77
224128087282 predicted protein [Populus trichocarpa] 0.978 0.659 0.754 3e-75
>gi|255553671|ref|XP_002517876.1| protein phosphatase 2c, putative [Ricinus communis] gi|223542858|gb|EEF44394.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  332 bits (852), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 160/187 (85%), Positives = 173/187 (92%)

Query: 1   MNGKEILQKMKVKAGFCTSALDTGKGKSKMSKHITHGYHLVKGKSNHAMEDYLVSEFKQE 60
           M G++IL KMKVKAGF +SA +TGKGKSK+ KHITHGYHLVKGKS+H MEDY+VS FKQ 
Sbjct: 1   MTGRDILHKMKVKAGFGSSASETGKGKSKLVKHITHGYHLVKGKSHHDMEDYVVSNFKQV 60

Query: 61  KDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQA 120
            +NELGLFAIFDGHLGHDVA+YLQ HLFDNILKEPDFWTDTESAIRRAYH TD +ILE+A
Sbjct: 61  NNNELGLFAIFDGHLGHDVASYLQNHLFDNILKEPDFWTDTESAIRRAYHTTDDEILEKA 120

Query: 121 FVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGG 180
           FVLGKGGSTAVTAILINGQKLVVANVGDSRAVI KNGVAKQLSVDHEPSKEK +IESRGG
Sbjct: 121 FVLGKGGSTAVTAILINGQKLVVANVGDSRAVICKNGVAKQLSVDHEPSKEKNMIESRGG 180

Query: 181 FVSNIPG 187
           FVSN+PG
Sbjct: 181 FVSNLPG 187

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224133470|ref|XP_002328050.1| predicted protein [Populus trichocarpa] gi|222837459|gb|EEE75838.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147796432|emb|CAN70385.1| hypothetical protein VITISV_029655 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225461504|ref|XP_002285109.1| PREDICTED: probable protein phosphatase 2C 39 [Vitis vinifera] gi|302142975|emb|CBI20270.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225446422|ref|XP_002275890.1| PREDICTED: probable protein phosphatase 2C 58 [Vitis vinifera] gi|147855345|emb|CAN81770.1| hypothetical protein VITISV_012074 [Vitis vinifera] gi|302143321|emb|CBI21882.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356542975|ref|XP_003539939.1| PREDICTED: probable protein phosphatase 2C 58-like [Glycine max] Back     alignment and taxonomy information
>gi|297803242|ref|XP_002869505.1| hypothetical protein ARALYDRAFT_491931 [Arabidopsis lyrata subsp. lyrata] gi|297315341|gb|EFH45764.1| hypothetical protein ARALYDRAFT_491931 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18417190|ref|NP_567808.1| putative protein phosphatase 2C 58 [Arabidopsis thaliana] gi|75163673|sp|Q93YW5.1|P2C58_ARATH RecName: Full=Probable protein phosphatase 2C 58; Short=AtPP2C58 gi|16604585|gb|AAL24149.1| putative protein phosphatase 2C [Arabidopsis thaliana] gi|20258991|gb|AAM14211.1| putative protein phosphatase 2C [Arabidopsis thaliana] gi|332660081|gb|AEE85481.1| putative protein phosphatase 2C 58 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|312282095|dbj|BAJ33913.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|224128087|ref|XP_002329078.1| predicted protein [Populus trichocarpa] gi|118484386|gb|ABK94070.1| unknown [Populus trichocarpa] gi|222869747|gb|EEF06878.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query190
TAIR|locus:2121373283 AT4G28400 [Arabidopsis thalian 0.984 0.660 0.775 1.1e-73
TAIR|locus:2046046 290 PIA1 "PP2C induced by AVRRPM1" 0.963 0.631 0.732 9.2e-68
TAIR|locus:2087095289 AT3G15260 [Arabidopsis thalian 0.984 0.647 0.689 3.2e-65
TAIR|locus:2061579339 AT2G34740 [Arabidopsis thalian 0.815 0.457 0.591 3.3e-47
TAIR|locus:2008341282 AT1G34750 [Arabidopsis thalian 0.884 0.595 0.579 1.3e-45
TAIR|locus:2194734283 AT1G78200 [Arabidopsis thalian 0.868 0.583 0.579 1.2e-44
TAIR|locus:2183695 354 AT5G10740 [Arabidopsis thalian 0.826 0.443 0.453 5e-28
TAIR|locus:2149363 447 AT5G24940 [Arabidopsis thalian 0.826 0.351 0.441 1.9e-26
TAIR|locus:2029172371 AT1G43900 [Arabidopsis thalian 0.768 0.393 0.443 1.9e-26
TAIR|locus:2124784 311 WIN2 "HOPW1-1-interacting 2" [ 0.826 0.504 0.429 2.5e-26
TAIR|locus:2121373 AT4G28400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
 Identities = 145/187 (77%), Positives = 163/187 (87%)

Query:     1 MNGKEILQKMKVKAGFCTSALDTGKGKSKMSKHITHGYHLVKGKSNHAMEDYLVSEFKQE 60
             M G  IL K+K+KAGFC SA D G+GKSKM K+ITHG+H VKGKS+H MEDY+VSEFK+ 
Sbjct:     1 MAGSNILHKIKLKAGFCGSAPDMGRGKSKMWKNITHGFHCVKGKSSHPMEDYVVSEFKKL 60

Query:    61 KDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQA 120
             + +ELGLFAIFDGHLGHDVA YLQT+LFDNILKE DFWTDTE+AIR AY  TD  IL+Q+
Sbjct:    61 EGHELGLFAIFDGHLGHDVAKYLQTNLFDNILKEKDFWTDTENAIRNAYRSTDAVILQQS 120

Query:   121 FVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGG 180
               LGKGGSTAVT ILI+G+KLVVANVGDSRAV+SKNGVA QLSVDHEPSKEK+ IESRGG
Sbjct:   121 LKLGKGGSTAVTGILIDGKKLVVANVGDSRAVMSKNGVAHQLSVDHEPSKEKKEIESRGG 180

Query:   181 FVSNIPG 187
             FVSNIPG
Sbjct:   181 FVSNIPG 187
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
GO:0005575 "cellular_component" evidence=ND
GO:0009627 "systemic acquired resistance" evidence=RCA
GO:0031347 "regulation of defense response" evidence=RCA
GO:0031348 "negative regulation of defense response" evidence=RCA
TAIR|locus:2046046 PIA1 "PP2C induced by AVRRPM1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2087095 AT3G15260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2061579 AT2G34740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008341 AT1G34750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2194734 AT1G78200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183695 AT5G10740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149363 AT5G24940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029172 AT1G43900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124784 WIN2 "HOPW1-1-interacting 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q0D673P2C62_ORYSJ3, ., 1, ., 3, ., 1, 60.67870.98420.6448yesno
Q93YW5P2C58_ARATH3, ., 1, ., 3, ., 1, 60.77540.98420.6607yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query190
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 2e-41
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 5e-38
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 1e-29
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 4e-24
PLN03145 365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 1e-22
PTZ00224 381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 1e-12
PRK14559645 PRK14559, PRK14559, putative protein serine/threon 9e-07
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  139 bits (352), Expect = 2e-41
 Identities = 62/159 (38%), Positives = 85/159 (53%), Gaps = 13/159 (8%)

Query: 36  HGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEP 95
            G     G      ED +V +     ++  GLF +FDGH GH    +    L + +L+E 
Sbjct: 3   AGVSDKGGD-RKTNEDAVVIKPNLNNEDG-GLFGVFDGHGGHAAGEFASKLLVEELLEEL 60

Query: 96  DFWTDT-----ESAIRRAYHMTDTKILEQA---FVLGKGGSTAVTAILINGQKLVVANVG 147
           +          E A+R+A+   D +ILE+A       + G+TAV A LI G KL VANVG
Sbjct: 61  EETLTLSEEDIEEALRKAFLRADEEILEEAQDEPDDARSGTTAVVA-LIRGNKLYVANVG 119

Query: 148 DSRAVISKNGVAKQLSVDHEPS--KEKRLIESRGGFVSN 184
           DSRAV+ +NG A QL+ DH+P   +E+  IE  GG VSN
Sbjct: 120 DSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVSN 158

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|237756 PRK14559, PRK14559, putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 190
PLN03145 365 Protein phosphatase 2c; Provisional 100.0
KOG0697 379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
KOG0698 330 consensus Serine/threonine protein phosphatase [Si 99.97
PTZ00224 381 protein phosphatase 2C; Provisional 99.97
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 99.96
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 99.95
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.92
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.92
PRK14559645 putative protein serine/threonine phosphatase; Pro 99.91
KOG0699 542 consensus Serine/threonine protein phosphatase [Si 99.91
KOG0700 390 consensus Protein phosphatase 2C/pyruvate dehydrog 99.87
KOG1323 493 consensus Serine/threonine phosphatase [Signal tra 99.79
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.62
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.33
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.28
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.1
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 98.39
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 97.92
PRK10693303 response regulator of RpoS; Provisional 88.03
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.6e-31  Score=224.00  Aligned_cols=151  Identities=33%  Similarity=0.492  Sum_probs=127.0

Q ss_pred             CceeEEEEeccCCCCCCCCccEEEeeccc--------CCCceEEEEEecCCccHHHHHHHHHHHHHHHHcCCCCcccHHH
Q 029671           32 KHITHGYHLVKGKSNHAMEDYLVSEFKQE--------KDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTES  103 (190)
Q Consensus        32 ~~~~~~~~s~~G~r~~~neD~~~i~~~~~--------~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~  103 (190)
                      +.+.++..|++|.|. .|||++++.....        +..+..||+|||||||+.++++++.+++..+.+.......+.+
T Consensus        63 ~~~~~~~~s~~G~R~-~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~~  141 (365)
T PLN03145         63 PVVRSGAWADIGSRS-SMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIEK  141 (365)
T ss_pred             CceEEEEEccccCCC-CCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHHH
Confidence            447899999999866 9999987633211        1234689999999999999999999999999876655567788


Q ss_pred             HHHHHHHHHHHHHHHhhc-ccCCCCcceEEEEEEeCCEEEEEEcCCceEEEEeCCeeeecCCCCCCc--hHHHHHHhCCc
Q 029671          104 AIRRAYHMTDTKILEQAF-VLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPS--KEKRLIESRGG  180 (190)
Q Consensus       104 ~l~~~f~~~~~~l~~~~~-~~~~~g~Tt~~~~~~~~~~l~~anvGDSra~l~r~g~~~~Lt~dH~~~--~E~~RI~~~gG  180 (190)
                      +|.++|.++|+.+.+... .....+|||++++++.++++|+|||||||+|+++++++++||.||+|.  .|++||+++||
T Consensus       142 al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg  221 (365)
T PLN03145        142 VVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGG  221 (365)
T ss_pred             HHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCC
Confidence            999999999999876542 222447888777788899999999999999999999999999999999  79999999999


Q ss_pred             EEE
Q 029671          181 FVS  183 (190)
Q Consensus       181 ~v~  183 (190)
                      .|.
T Consensus       222 ~v~  224 (365)
T PLN03145        222 YVY  224 (365)
T ss_pred             cee
Confidence            986

>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>PRK10693 response regulator of RpoS; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query190
2iq1_A 274 Crystal Structure Of Human Ppm1k Length = 274 1e-13
4da1_A 389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 2e-13
2i0o_A 304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 2e-13
2p8e_A 307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 3e-11
3nmv_B 324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 4e-11
3kdj_B 316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 2e-10
3nmn_B 319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 2e-10
3jrq_A 326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 2e-10
1a6q_A 382 Crystal Structure Of The Protein SerineTHREONINE PH 3e-10
3fxj_A 390 Crystal Structure Of Human Protein Phosphatase 1a ( 3e-10
3qn1_B 337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 3e-09
4ds8_B 343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 3e-09
3ujg_B 350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 3e-09
3nmt_B 341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 3e-09
3rt0_A 340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 3e-09
3kb3_B 321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 3e-09
2pop_A 353 The Crystal Structure Of Tab1 And Bir1 Complex Leng 1e-07
2pom_A 372 Tab1 With Manganese Ion Length = 372 3e-06
2j4o_A 401 Structure Of Tab1 Length = 401 3e-06
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure 
Iteration: 1

 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 74/135 (54%), Gaps = 8/135 (5%)
Query: 56  EFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTK 115
           +F Q  D E+  FA++DGH G   A++  TH+   I+       + E+ +  A+   D  
Sbjct: 27  DFAQLTD-EVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKA 85
Query: 116 ILEQAFV-----LGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSK 170
               A +     L   G+TA  A+L +G +LVVA+VGDSRA++ + G   +L++DH P +
Sbjct: 86  FSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPER 145
Query: 171 --EKRLIESRGGFVS 183
             EK  I+  GGFV+
Sbjct: 146 KDEKERIKKCGGFVA 160
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 Back     alignment and structure
>pdb|2POM|A Chain A, Tab1 With Manganese Ion Length = 372 Back     alignment and structure
>pdb|2J4O|A Chain A, Structure Of Tab1 Length = 401 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query190
4da1_A 389 Protein phosphatase 1K, mitochondrial; metal-ION-a 4e-59
2iq1_A 274 Protein phosphatase 2C kappa, PPM1K; structural ge 3e-55
1a6q_A 382 Phosphatase 2C; catalytic mechanism, metalloenzyme 9e-51
2p8e_A 307 PPM1B beta isoform variant 6; structural genomics, 1e-50
3kdj_B 316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 2e-49
2i0o_A 304 Ser/Thr phosphatase; beta sandwich, structural gen 1e-47
2i44_A 324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 6e-47
3qn1_B 337 Protein phosphatase 2C 16; start domain, BET V dom 8e-46
2j4o_A 401 Mitogen-activated protein kinase kinase kinase 7-i 7e-37
2irm_A 358 Mitogen-activated protein kinase kinase kinase 7 i 8e-31
3d8k_A 377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 2e-30
2isn_A 364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 1e-27
2pnq_A 467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 3e-16
2pnq_A 467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 4e-06
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 5e-14
1txo_A237 Putative bacterial enzyme; serine/threonine protei 4e-12
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 6e-12
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 4e-11
3rnr_A211 Stage II sporulation E family protein; structural 2e-10
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
 Score =  188 bits (479), Expect = 4e-59
 Identities = 56/194 (28%), Positives = 88/194 (45%), Gaps = 12/194 (6%)

Query: 1   MNGKEILQKMKVKAGFCTSALDTGKGKSKMSKHITHGYHLVKGKSNHAMEDYLVSEFKQE 60
           M   +I++  + + G        GK   K+S     G     GK     ED        +
Sbjct: 90  MEDNDIIEAHREQIGGENLYFQAGKPIPKIS-LENVGCASQIGKRKE-NEDRFDFA---Q 144

Query: 61  KDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQA 120
             +E+  FA++DGH G   A++  TH+   I+       + E+ +  A+   D      A
Sbjct: 145 LTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHA 204

Query: 121 -----FVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPS--KEKR 173
                  L   G+TA  A+L +G +LVVA+VGDSRA++ + G   +L++DH P    EK 
Sbjct: 205 RLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKE 264

Query: 174 LIESRGGFVSNIPG 187
            I+  GGFV+    
Sbjct: 265 RIKKCGGFVAWNSL 278
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 190
d1a6qa2 295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 3e-17
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 8e-13
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.4 bits (184), Expect = 3e-17
 Identities = 52/177 (29%), Positives = 73/177 (41%), Gaps = 24/177 (13%)

Query: 27  KSKMSKHITH--------GYHLVKGKSNHAMEDYLVSEFKQEKDNE-LGLFAIFDGHLGH 77
           K KM KH           G   ++G     MED   +        E    FA++DGH G 
Sbjct: 6   KPKMEKHNAQGQGNGLRYGLSSMQGWRVE-MEDAHTAVIGLPSGLESWSFFAVYDGHAGS 64

Query: 78  DVANYLQTHLFDNILKEPDFWTDT--------ESAIRRAYHMT---DTKILEQAFVLGKG 126
            VA Y   HL D+I    DF            ++ IR  +         + E+     + 
Sbjct: 65  QVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRS 124

Query: 127 GSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPS--KEKRLIESRGGF 181
           GSTAV  +LI+ Q     N GDSR ++ +N      + DH+PS   EK  I++ GG 
Sbjct: 125 GSTAV-GVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGS 180
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query190
d1a6qa2 295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 99.94
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-34  Score=207.40  Aligned_cols=155  Identities=26%  Similarity=0.369  Sum_probs=130.6

Q ss_pred             CCCCEEEEEEECCCCCCCCCCCCEEEEECCCC-CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCC--------CCCCC
Q ss_conf             99961599980148999999862787203468-9964899996498607999999999999998299--------99110
Q 029671           30 MSKHITHGYHLVKGKSNHAMEDYLVSEFKQEK-DNELGLFAIFDGHLGHDVANYLQTHLFDNILKEP--------DFWTD  100 (190)
Q Consensus        30 ~~~~~~~~~~s~~G~~~~~neD~~~v~~~~~~-~~~~~~~~V~DGhgG~~~a~~~~~~l~~~l~~~~--------~~~~~  100 (190)
                      ..+.+.|++++++|.|+ .|||++.+...... .+++.||+|||||||.++|++++.+++..+.+..        .....
T Consensus        17 ~~~~~~~g~~s~~G~R~-~~ED~~~~~~~~~~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~   95 (295)
T d1a6qa2          17 QGNGLRYGLSSMQGWRV-EMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVEN   95 (295)
T ss_dssp             EETTEEEEEEEEEETSS-SCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHH
T ss_pred             CCCCEEEEEEECCCCCC-CCCCEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
T ss_conf             68956899983721887-44370499705688987607999995999818999999999999997554213456515899


Q ss_pred             HHHHHHHHHHHHHHHHHHHH--CCCCCCCCCEEEEEEEECCEEEEEECCCCEEEEEECCEEEECCCCCCCC--HHHHHHH
Q ss_conf             99999999999999999751--1228997633899999399999998088608997189032168889980--5899998
Q 029671          101 TESAIRRAYHMTDTKILEQA--FVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPS--KEKRLIE  176 (190)
Q Consensus       101 ~~~~l~~~~~~~~~~l~~~~--~~~~~~~~Tt~~~~~~~~~~l~~anvGDSra~l~r~g~~~~lt~dH~~~--~E~~Ri~  176 (190)
                      +.++|+++|.++++.+....  ......+|||++++++.++++|+|||||||+|+++++.+.+||.||+|.  .|+.||.
T Consensus        96 ~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~~~~~lT~dH~~~~~~E~~Ri~  175 (295)
T d1a6qa2          96 VKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQ  175 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCEEEEEECCCCEEEEEECCCCEEECCCCCCCCHHHHHHHH
T ss_conf             99999999999998876655404576779975999994288999995578769986034401101456753187875676


Q ss_pred             HCCCEEECC
Q ss_conf             589689857
Q 029671          177 SRGGFVSNI  185 (190)
Q Consensus       177 ~~gG~i~~~  185 (190)
                      .+||+|...
T Consensus       176 ~~gg~v~~~  184 (295)
T d1a6qa2         176 NAGGSVMIQ  184 (295)
T ss_dssp             HTTCCEETT
T ss_pred             HCCCCCCCC
T ss_conf             447741024
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure