Citrus Sinensis ID: 029795

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------
Protein Sequence
MMGMKKGFLCGILFGFIALRVVTADDATNKECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNASTSLCPKLLGLSPSSPDAAIFTNTSSSATPTTPAAAGTSASDGSSGNMHGPYLLGPTVIIAMSIFFYAFPTGSASLCA
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHcccccHHHHccccccccHHHHHHHHHccccccccccHHcHHcccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHccccccHHcccccccccccHHHHHHHHHcccccEEEEEEEcccccccccccccEEcHHHHHcccHHcccccccccHcHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccEEcc
Coil and Loop (DISEMBL)
MMGMKKGFLCGILFGFIALRVvtaddatnKECSEYLQKTMACLDfargkittpskeccsavkgikdddpkcLCYIIKeanggegdmvknlgvqvpkllqlpsacqlknastslcpkllglspsspdaaiftntsssatpttpaaagtsasdgssgnmhgpyllgpTVIIAMSIFFyafptgsaslca
Flexible Loop (DISEMBL)
MMGMKKGFLCGILFGFIALRVVTADDATNKECSEYLQKTMACLDFArgkittpskeccsavkgikdddpkCLCYIIKEanggegdmvKNLGVQVPKLLQLPSACQLKNASTSLCPKLLGLSPSSPDAAIFTNtsssatpttpAAAGTSASDGSSGNMHGPYLLGPTVIIAMSIFFYAFPTGSASLCA
Low Complexity Region (SEG)
MMGMKKGFLCGILFGFIALRVVTADDATNKECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNASTSLCPKLLGLSPSSPDAAIFTNtsssatpttpaaagtsasdgssgNMHGPYLLGPTVIIAMSIFFYAFPTGSASLCA
Disordered region (IsUnstruct)
******GFLCGILFGFIALRVVTADDATNKECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNASTSLCPKLL****************************************GPYLLGPTVIIAMSIFFYAFPT*******
Disordered Region (DISOPRED)
*********CGILFGFIALRV***********SEYLQKTMACLDFAR****TP***CCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNAST****************************************************GPTVIIAMSIFFYAFPTGSASLCA
Disordered Region (DISEMBL)
MMGMKKGFLCGILFGFIALRVVTADDATNKECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNASTSLCPKLLGLSPSSPDAAIFTNTSS*******************GNMHGPYLLGPTVIIAMSIFFYAFPTGSASLCA
Disordered Region (DISPRO)
**GMKKGFLCGILFGFIALRVVTADDATNKECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNASTSLCPKLLGLS**************************************PYLLGPTVIIAMSIFFYAFPTGSASLCA
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiii
Transmembrane Helix (MEMSAT)
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MMGMKKGFLCGILFGFIALRVVTADDATNKECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNASTSLCPKLLGLSPSSPDAAIFTNTSSSATPTTPAAAGTSASDGSSGNMHGPYLLGPTVIIAMSIFFYAFPTGSASLCA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	187	2.2.26 [Sep-21-2011]
Q9C7F7	193	Uncharacterized GPI-ancho	yes	no	0.770	0.746	0.490	3e-34

>sp|Q9C7F7|UGPI5_ARATH Uncharacterized GPI-anchored protein At1g27950 OS=Arabidopsis thaliana GN=At1g27950 PE=1 SV=1

 Score =  144 bits (363), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/151 (49%), Positives = 101/151 (66%), Gaps = 7/151 (4%)

Query: 31  ECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNL 90
           EC++  QK   CLDFA GK T PSK+CC AV+ IK+ DPKCLC++I++A  G G  +K+L
Sbjct: 34  ECNQDFQKVTLCLDFATGKATIPSKKCCDAVEDIKERDPKCLCFVIQQAKTG-GQALKDL 92

Query: 91  GVQVPKLLQLPSACQLKNASTSLCPKLLGLSPSSPDAAIFTNTSSSATPT-----TPAAA 145
           GVQ  KL+QLP++CQL NAS + CPKLLG+SPSSPDAA+FTN +++ TP      +PA  
Sbjct: 93  GVQEDKLIQLPTSCQLHNASITNCPKLLGISPSSPDAAVFTNNATT-TPVAPAGKSPATP 151

Query: 146 GTSASDGSSGNMHGPYLLGPTVIIAMSIFFY 176
            TS   G S +    + +    +  M++ F 
Sbjct: 152 ATSTDKGGSASAKDGHAVVALAVALMAVSFV 182

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	187
255547702	184	lipid binding protein, putative [Ricinus	0.935	0.951	0.521	3e-43
224072586	191	predicted protein [Populus trichocarpa]	0.877	0.858	0.547	9e-43
351727613	191	uncharacterized protein LOC100499777 pre	0.855	0.837	0.488	6e-36
224057734	247	predicted protein [Populus trichocarpa]	0.844	0.639	0.475	7e-35
45720186	185	putative lipid transfer protein GPI-anch	0.962	0.972	0.448	1e-34
297845742	197	hypothetical protein ARALYDRAFT_890328 [	0.780	0.741	0.516	3e-34
21553541	193	lipid transfer protein, putative [Arabid	0.770	0.746	0.496	4e-33
351722981	193	uncharacterized protein LOC100305718 pre	0.957	0.927	0.447	1e-32
15217777	193	glycosylphosphatidylinositol-anchored li	0.770	0.746	0.490	2e-32
388520033	179	unknown [Lotus japonicus]	0.823	0.860	0.465	3e-32

>gi|255547702|ref|XP_002514908.1| lipid binding protein, putative [Ricinus communis] gi|223545959|gb|EEF47462.1| lipid binding protein, putative [Ricinus communis]

 Score =  179 bits (455), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 98/188 (52%), Positives = 127/188 (67%), Gaps = 13/188 (6%)

Query: 2   MGMKKGFLCGILFGFIALRVVT-ADDATNKECSEYLQKTMACLDFARGKITTPSKECCSA 60
           MG +  F+  + F  ++L   + + D   +ECS  +QK M CLD+A+GKI TP K CCSA
Sbjct: 1   MGCQSLFVLSV-FLILSLNCCSVSSDNIAEECSSEVQKVMPCLDYAKGKIDTPPKGCCSA 59

Query: 61  VKGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNASTSLCPKLLGL 120
           VK +KD DPKCLC+I+++ + G  + +K+LG+Q  KLLQLPSACQL+NAS S CPKLLG+
Sbjct: 60  VKDMKDSDPKCLCFIMQQTHNGSAE-IKSLGIQEAKLLQLPSACQLQNASISFCPKLLGI 118

Query: 121 SPSSPDAAIFTNTSSSATPTTPAAAGTSASDGS-----SGNMHGPYLLGPTVIIAMSIFF 175
            P+SPDAAIFTN +S++TP   A  GTSA D S     +G MH PYL      IA +IF 
Sbjct: 119 PPNSPDAAIFTNATSTSTPAATATPGTSAPDTSNNDRPNGTMHRPYL-----AIATAIFI 173

Query: 176 YAFPTGSA 183
           Y F  GSA
Sbjct: 174 YIFTAGSA 181

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224072586|ref|XP_002303794.1| predicted protein [Populus trichocarpa] gi|222841226|gb|EEE78773.1| predicted protein [Populus trichocarpa]

 Score =  178 bits (452), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 93/170 (54%), Positives = 120/170 (70%), Gaps = 6/170 (3%)

Query: 19  LRVVTADDATNKECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKE 78
            R V  D  T +ECS   QK M CL +A GK  TP+K+CC +V+ IK+ DPKCLC+I+++
Sbjct: 22  FRAVNGDGVT-EECSSDFQKLMGCLSYASGKANTPTKDCCLSVQNIKESDPKCLCFIMQQ 80

Query: 79  ANGGEGDMVKNLGVQVPKLLQLPSACQLKNASTSLCPKLLGLSPSSPDAAIFTNTSSSAT 138
            + G    +KNLG+Q  KLLQLP+ACQL+NAS S CPKLLG+SPSSPDAAIFTN S++AT
Sbjct: 81  TSNGSAP-IKNLGIQEAKLLQLPTACQLQNASLSFCPKLLGISPSSPDAAIFTNASTTAT 139

Query: 139 PTTPAAAGTSASD---GSSGNMHGPYLLGPTVIIAMSIFFYAFPTGSASL 185
           P    + GTS S+    SSG  H P+L G  +I+A +IF +A P GSAS+
Sbjct: 140 PAASTSTGTSQSEKAGDSSGFQHRPHLAGFFMIVA-AIFVFASPAGSASM 188

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727613|ref|NP_001235887.1| uncharacterized protein LOC100499777 precursor [Glycine max] gi|255626461|gb|ACU13575.1| unknown [Glycine max]

 Score =  155 bits (393), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 109/168 (64%), Gaps = 8/168 (4%)

Query: 24  ADDATNKECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGE 83
           ADD   K CS  +QK + CLDFA+GK  TP K+CC A   IK+ +P+CLCYII+E + G 
Sbjct: 24  ADDLATK-CSAVIQKVIPCLDFAKGKEETPKKQCCDAATSIKESNPECLCYIIEETHKG- 81

Query: 84  GDMVKNLGVQVPKLLQLPSACQLKNASTSLCPKLLGLSPSSPDAAIFTNTSSSATPTTPA 143
              VK+LG+Q  KLLQLPS C +KNAS + CPKLLGLSPSSPDAAIFT+ SS  TP+ PA
Sbjct: 82  SPQVKSLGIQEAKLLQLPSVCNVKNASITNCPKLLGLSPSSPDAAIFTSNSSKTTPSAPA 141

Query: 144 AAGTSASDGSSGNMHGPYLLGPT------VIIAMSIFFYAFPTGSASL 185
            + +  +   S N     ++ P+      +++A++I   A PT   S+
Sbjct: 142 TSNSQTTTPQSQNASYGSMVQPSSTVTYAIVMALAIVLIALPTEIVSI 189

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224057734|ref|XP_002299306.1| predicted protein [Populus trichocarpa] gi|222846564|gb|EEE84111.1| predicted protein [Populus trichocarpa]

 Score =  152 bits (383), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 86/181 (47%), Positives = 109/181 (60%), Gaps = 23/181 (12%)

Query: 26  DATNKECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGD 85
           ++ ++ECS  +QK M CL +A GK  TP K+CCSAV+ IKD +PKCLCY +++A+     
Sbjct: 28  ESLSEECSSDVQKVMGCLSYATGKANTPPKDCCSAVQDIKDSEPKCLCYTMQQAHNASSQ 87

Query: 86  MVKNLGVQVPKLLQLPSACQLKNASTSLCPK--------------------LLGLSPSSP 125
             K+LGVQ  KLLQLP+ACQL+NAS S CPK                    LLGLSP S 
Sbjct: 88  F-KSLGVQEAKLLQLPTACQLQNASLSFCPKTAIDVNRSLMLDLWLEKHPELLGLSPGSA 146

Query: 126 DAAIFTNTSSSATPTTPAAAGTSASDGSSGNMH-GPYLLGPTVIIAMSIFFYAFPTGSAS 184
           DAAIFTN S+SATP            G S  +   P L G  +I+A +IF +AFP GSAS
Sbjct: 147 DAAIFTNASTSATPAVSTGKSQPEQAGGSSRIQLRPPLAGLLMIVA-TIFVFAFPAGSAS 205

Query: 185 L 185
           +
Sbjct: 206 M 206

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|45720186|emb|CAG14984.1| putative lipid transfer protein GPI-anchored [Cicer arietinum]

 Score =  151 bits (381), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/185 (44%), Positives = 114/185 (61%), Gaps = 5/185 (2%)

Query: 4   MKKGFLCGILFGFIALRVVTADDATNKECSEYLQKTMACLDFARGKITTPSKECCSAVKG 63
           MK  F+C +    I      A+D   K C + +QK + CLDFA GK  TP KECC A   
Sbjct: 1   MKLTFVCVLGLIMIIGGSEGAEDLAQK-CGQVVQKVIPCLDFATGKALTPKKECCDAANS 59

Query: 64  IKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNASTSLCPKLLGLSPS 123
           IK+ DP+CLCYII++ + G  +  K+LG+Q  KLLQLP+ C++KNA+ + CPKLLGLSPS
Sbjct: 60  IKETDPECLCYIIQQTHKGSPES-KSLGIQEDKLLQLPTVCKVKNANLTDCPKLLGLSPS 118

Query: 124 SPDAAIFTNTSSSATPTTPAAAGTSAS---DGSSGNMHGPYLLGPTVIIAMSIFFYAFPT 180
           SPDAAIF N S  + P+TP+A+    S     S   M  P ++   +++ ++I   A PT
Sbjct: 119 SPDAAIFKNASKLSPPSTPSASADQTSTPPTPSDSYMVRPLMMTEVIVMTLAILAVAVPT 178

Query: 181 GSASL 185
           G  S+
Sbjct: 179 GFISI 183

Source: Cicer arietinum

Species: Cicer arietinum

Genus: Cicer

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297845742|ref|XP_002890752.1| hypothetical protein ARALYDRAFT_890328 [Arabidopsis lyrata subsp. lyrata] gi|297336594|gb|EFH67011.1| hypothetical protein ARALYDRAFT_890328 [Arabidopsis lyrata subsp. lyrata]

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 79/153 (51%), Positives = 104/153 (67%), Gaps = 7/153 (4%)

Query: 31  ECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNL 90
           ECS+  QK   CLDFA GK TTPSK+CC AV+ IK+ DPKCLC++I++A  G G  +K+L
Sbjct: 36  ECSQDFQKVTLCLDFATGKATTPSKKCCDAVEDIKERDPKCLCFVIQQAKTG-GQALKDL 94

Query: 91  GVQVPKLLQLPSACQLKNASTSLCPKLLGLSPSSPDAAIFT-NTSSSATPT-----TPAA 144
           GVQ  KL+QLP+ACQL NAS + CPKLLGLSPSSPDAA+FT N ++S TP      +PA 
Sbjct: 95  GVQEDKLIQLPTACQLHNASITNCPKLLGLSPSSPDAAVFTSNATTSTTPVAPAGKSPAT 154

Query: 145 AGTSASDGSSGNMHGPYLLGPTVIIAMSIFFYA 177
             TS   G S + +  + +    I  +++ F +
Sbjct: 155 PATSTEKGGSASANDGHAVVALAIALVTVSFVS 187

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21553541|gb|AAM62634.1| lipid transfer protein, putative [Arabidopsis thaliana]

 Score =  146 bits (368), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 75/151 (49%), Positives = 102/151 (67%), Gaps = 7/151 (4%)

Query: 31  ECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNL 90
           EC++  QK   CLDFA GK TTPSK+CC AV+ IK+ DPKCLC++I++A  G G  +K+L
Sbjct: 34  ECNQDFQKVTLCLDFATGKATTPSKKCCDAVEDIKERDPKCLCFVIQQAKTG-GQALKDL 92

Query: 91  GVQVPKLLQLPSACQLKNASTSLCPKLLGLSPSSPDAAIFTNTSSSATPT-----TPAAA 145
           GVQ  KL+QLP++CQL NAS + CPKLLG+SPSSPDAA+FTN +++ TP      +PA  
Sbjct: 93  GVQEDKLIQLPTSCQLHNASITNCPKLLGISPSSPDAAVFTNNATT-TPVAPAGKSPATP 151

Query: 146 GTSASDGSSGNMHGPYLLGPTVIIAMSIFFY 176
            TS   G S +    + +    +  M++ F 
Sbjct: 152 ATSTDKGGSASAKDGHAVVALAVALMAVSFV 182

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351722981|ref|NP_001235727.1| uncharacterized protein LOC100305718 precursor [Glycine max] gi|255626405|gb|ACU13547.1| unknown [Glycine max]

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/190 (44%), Positives = 113/190 (59%), Gaps = 11/190 (5%)

Query: 2   MGMKKGFLCGILFGFIALRVVTADDATNKECSEYLQKTMACLDFARGKITTPSKECCSAV 61
           MG+  G L  ++ G        ADD   K CS  +QK + CL+FA GK   P KECC A 
Sbjct: 7   MGL--GLLVVVMMGCCG-SATAADDLATK-CSAVIQKVIPCLNFATGKEEMPKKECCDAA 62

Query: 62  KGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNASTSLCPKLLGLS 121
             IK+ +P+CLCYII+E + G    VK+LG+Q  KLLQLPS C +KNAS + CPKLLGLS
Sbjct: 63  TAIKESNPECLCYIIQETHKG-SPQVKSLGIQEAKLLQLPSVCNVKNASITNCPKLLGLS 121

Query: 122 PSSPDAAIFTNTSSSATPTTPAAAGTSASDGSSGNMHGPYLLGPT------VIIAMSIFF 175
           PSSPDAAIFT+ SS  TP+ P    +  +   S N     ++ P+      + +A++I  
Sbjct: 122 PSSPDAAIFTSNSSKTTPSAPTTTNSQTTTPQSQNASHGSMVQPSSTVTYVMAMALAIVL 181

Query: 176 YAFPTGSASL 185
            A PT + S+
Sbjct: 182 VAVPTETVSI 191

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15217777|ref|NP_174116.1| glycosylphosphatidylinositol-anchored lipid protein transfer 1 [Arabidopsis thaliana] gi|38258836|sp|Q9C7F7.1|UGPI5_ARATH RecName: Full=Uncharacterized GPI-anchored protein At1g27950; Flags: Precursor gi|12322995|gb|AAG51485.1|AC069471_16 lipid transfer protein, putative [Arabidopsis thaliana] gi|20260114|gb|AAM12955.1| lipid transfer protein, putative [Arabidopsis thaliana] gi|22136068|gb|AAM91112.1| lipid transfer protein, putative [Arabidopsis thaliana] gi|332192773|gb|AEE30894.1| glycosylphosphatidylinositol-anchored lipid protein transfer 1 [Arabidopsis thaliana]

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/151 (49%), Positives = 101/151 (66%), Gaps = 7/151 (4%)

Query: 31  ECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNL 90
           EC++  QK   CLDFA GK T PSK+CC AV+ IK+ DPKCLC++I++A  G G  +K+L
Sbjct: 34  ECNQDFQKVTLCLDFATGKATIPSKKCCDAVEDIKERDPKCLCFVIQQAKTG-GQALKDL 92

Query: 91  GVQVPKLLQLPSACQLKNASTSLCPKLLGLSPSSPDAAIFTNTSSSATPT-----TPAAA 145
           GVQ  KL+QLP++CQL NAS + CPKLLG+SPSSPDAA+FTN +++ TP      +PA  
Sbjct: 93  GVQEDKLIQLPTSCQLHNASITNCPKLLGISPSSPDAAVFTNNATT-TPVAPAGKSPATP 151

Query: 146 GTSASDGSSGNMHGPYLLGPTVIIAMSIFFY 176
            TS   G S +    + +    +  M++ F 
Sbjct: 152 ATSTDKGGSASAKDGHAVVALAVALMAVSFV 182

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388520033|gb|AFK48078.1| unknown [Lotus japonicus]

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/161 (46%), Positives = 106/161 (65%), Gaps = 7/161 (4%)

Query: 26  DATNKECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGD 85
           D   ++C + +QK + CL FA GK  TPSK+CC +   IKD DP+CLCYII++ + G  +
Sbjct: 23  DNLAEKCGQVVQKVIPCLGFATGKEATPSKQCCDSATVIKDTDPECLCYIIQQTHKGSAE 82

Query: 86  MVKNLGVQVPKLLQLPSACQLKNASTSLCPKLLGLSPSSPDAAIFTNTSSSATPTTPAAA 145
             K++G++  +LLQLPSACQ+KNAS S CPKLLGLSPSSPDAAIFTN S     T P++A
Sbjct: 83  S-KSMGIREDRLLQLPSACQVKNASISNCPKLLGLSPSSPDAAIFTNASKL---TPPSSA 138

Query: 146 GTSASDGSSGN---MHGPYLLGPTVIIAMSIFFYAFPTGSA 183
            T  +   S N   +  P ++   +++A++I     PT ++
Sbjct: 139 NTETATPQSPNGSVVRAPPMIFEVMVMALAIVLITIPTRNS 179

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	187
TAIR|locus:2010479	193	LTPG1 "AT1G27950" [Arabidopsis	0.540	0.523	0.627	6e-32
TAIR|locus:2050492	204	AT2G44300 [Arabidopsis thalian	0.582	0.534	0.387	4.1e-17
TAIR|locus:2050482	205	AT2G44290 [Arabidopsis thalian	0.545	0.497	0.416	4.7e-16
TAIR|locus:2076406	177	AT3G58550 [Arabidopsis thalian	0.572	0.604	0.338	3.5e-11
TAIR|locus:2101044	193	LTPG2 "glycosylphosphatidylino	0.481	0.466	0.320	5.2e-10
TAIR|locus:2077001	170	AT3G22600 [Arabidopsis thalian	0.529	0.582	0.257	9.7e-09
TAIR|locus:2039366	183	AT2G48130 [Arabidopsis thalian	0.620	0.633	0.253	1.2e-08
TAIR|locus:2184817	158	AT5G09370 [Arabidopsis thalian	0.470	0.556	0.35	8.7e-08
TAIR|locus:505006466	156	AT4G14815 [Arabidopsis thalian	0.529	0.634	0.283	1.4e-07
TAIR|locus:2035052	147	AT1G73560 [Arabidopsis thalian	0.598	0.761	0.294	2.9e-07

TAIR|locus:2010479 LTPG1 "AT1G27950" [Arabidopsis thaliana (taxid:3702)]

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 64/102 (62%), Positives = 81/102 (79%)

Query:    31 ECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNL 90
             EC++  QK   CLDFA GK T PSK+CC AV+ IK+ DPKCLC++I++A  G G  +K+L
Sbjct:    34 ECNQDFQKVTLCLDFATGKATIPSKKCCDAVEDIKERDPKCLCFVIQQAKTG-GQALKDL 92

Query:    91 GVQVPKLLQLPSACQLKNASTSLCPKLLGLSPSSPDAAIFTN 132
             GVQ  KL+QLP++CQL NAS + CPKLLG+SPSSPDAA+FTN
Sbjct:    93 GVQEDKLIQLPTSCQLHNASITNCPKLLGISPSSPDAAVFTN 134

GO:0003674 "molecular_function" evidence=ND

GO:0006869 "lipid transport" evidence=IEA;IMP

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2050492 AT2G44300 [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 45/116 (38%), Positives = 67/116 (57%)

Query:    17 IALRVVTADDATN--KECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCY 74
             +A+ V  ADD T   +EC+E L     CL + +G+  +P+ +CCS +K + + + KCLC 
Sbjct:    18 VAMVVAAADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVLNSNKKCLCV 77

Query:    75 IIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNASTSLCPKLLGLSPSSPDAAIF 130
             II++ N  + D+   L + V   L LPS C    A  + CP LL L P+SPDA +F
Sbjct:    78 IIQDRN--DPDL--GLQINVSLALALPSVCHAA-ADVTKCPALLHLDPNSPDAQVF 128

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006869 "lipid transport" evidence=IEA

GO:0008289 "lipid binding" evidence=IEA

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2050482 AT2G44290 [Arabidopsis thaliana (taxid:3702)]

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 45/108 (41%), Positives = 61/108 (56%)

Query:    24 ADDATNKE-CSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGG 82
             AD   +KE C+  L     CL + +GK  +P+ +CCS +K + + D KCLC II+E N  
Sbjct:    27 ADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSDMKCLCMIIQERN-- 84

Query:    83 EGDMVKNLGVQVPKLLQLPSACQLKNASTSLCPKLLGLSPSSPDAAIF 130
             + D+   L V V   L LPS C    A  + CP LL L P+SPDA +F
Sbjct:    85 DPDL--GLQVNVSLALALPSVCHA-TADITKCPALLHLDPNSPDAQVF 129

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2076406 AT3G58550 [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 40/118 (33%), Positives = 57/118 (48%)

Query:    16 FIALRVVTADDATNKECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDP---KCL 72
             F+ +R   + D   K C + +    +CL F   K   P   CCS +K +K D     KCL
Sbjct:    24 FLGVRSELSQDI--KGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLK-VKIDKGQTRKCL 80

Query:    73 CYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNASTSLCPKLLGLSPSSPDAAIF 130
             C ++K+ +    D      V   + + LPSAC +  A+ S CP LL L P SP + IF
Sbjct:    81 CTLVKDRD----DPGLGFKVDANRAMSLPSACHVP-ANISQCPDLLHLLPDSPASQIF 133

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2101044 LTPG2 "glycosylphosphatidylinositol-anchored lipid protein transfer 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 33/103 (32%), Positives = 48/103 (46%)

Query:    31 ECSEYLQKTMACLDFAR----GKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDM 86
             +C   L     CL +      G    P K CC A+ G+ +  P+CLCY++       GDM
Sbjct:    37 DCMANLMNMTGCLSYVTVGEGGGAAKPDKTCCPALAGLVESSPQCLCYLLS------GDM 90

Query:    87 VKNLGVQVPKL--LQLPSACQLKNASTSLCPKLLGLSPSSPDA 127
                LG+++ K   L+LP  C +     SLC  L G+   +P A
Sbjct:    91 AAQLGIKIDKAKALKLPGVCGVITPDPSLC-SLFGIPVGAPVA 132

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

GO:0042546 "cell wall biogenesis" evidence=RCA

TAIR|locus:2077001 AT3G22600 [Arabidopsis thaliana (taxid:3702)]

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 27/105 (25%), Positives = 52/105 (49%)

Query:    11 GILFGFIALRVVTADDAT-NKECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDP 69
             G++F  + + V+++   +    C+  L     CL++  G  T+P+++CC+ +  +    P
Sbjct:     6 GLVFLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVVQSSP 65

Query:    70 KCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNASTSLC 114
              CLC ++   NGG   +   + V   + L LP AC ++    S C
Sbjct:    66 DCLCQVL---NGGGSQL--GINVNQTQALGLPRACNVQTPPVSRC 105

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2039366 AT2G48130 [Arabidopsis thaliana (taxid:3702)]

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 32/126 (25%), Positives = 55/126 (43%)

Query:     2 MGMKKGFLCGILFGFIALRVVTADDATNKECSEYLQKTMACLDFARGKITTPSKECCSAV 61
             MG ++ +    +    AL  VT    ++  C   L     CL +  G  TTPS+ CCS +
Sbjct:     1 MGYRRSYAITFVALVAALWSVTKAQPSSS-CVSTLTTLSPCLSYITGNSTTPSQPCCSRL 59

Query:    62 KGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKL--LQLPSACQLKNASTSLCPKLLG 119
               +    P+C+C  +          + N+G+ + +   LQLP+AC ++    + C    G
Sbjct:    60 DSVIKSSPQCICSAVNSP-------IPNIGLNINRTQALQLPNACNIQTPPLTQCNAATG 112

Query:   120 LSPSSP 125
              +   P
Sbjct:   113 PTAQPP 118

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2184817 AT5G09370 [Arabidopsis thaliana (taxid:3702)]

 Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
 Identities = 35/100 (35%), Positives = 46/100 (46%)

Query:    31 ECSEYLQKTMACLDFAR--GKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVK 88
             +C   +     CL F    G   TP+  CCS++K I D  P CLC  +K+A  G    +K
Sbjct:    27 DCDTLVITLFPCLPFISIGGTADTPTASCCSSLKNILDTKPICLCEGLKKAPLG----IK 82

Query:    89 NLGVQVPKLLQLPSACQLKNASTSLCPKLLGLSPSSPDAA 128
                + V K   LP AC+L     S C  L    P+SP  A
Sbjct:    83 ---LNVTKSATLPVACKLNAPPVSACDSL---PPASPPTA 116

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:505006466 AT4G14815 [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 30/106 (28%), Positives = 49/106 (46%)

Query:     9 LCGILFGFIALRVVTADDATNKECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDD 68
             +C ILF  IAL  V +  +    C+  L     CL F     + PS++CC+ +  +    
Sbjct:     5 MCLILF--IALMRVMSIVSAQSSCTNVLISMAPCLSFITQNTSLPSQQCCNQLAHVVRYS 62

Query:    69 PKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNASTSLC 114
              +CLC ++   +GG   +   + V   + L LP AC ++    S C
Sbjct:    63 SECLCQVL---DGGGSQL--GINVNETQALALPKACHVETPPASRC 103

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2035052 AT1G73560 [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 35/119 (29%), Positives = 50/119 (42%)

Query:     8 FLCGILFGFIALRVVTADDATNKECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDD 67
             FL  ++   +   V       N + +  LQK + C  +       P   CC  +K I + 
Sbjct:     6 FLAVVVAVVVLYSVEATAQGGNPQLTACLQKLLPCQPYIHSLNPPPPPSCCGPMKEIVEK 65

Query:    68 DPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNASTSLCPKLLGLSP-SSP 125
             D  CLC      N  E  ++K L +     L LP AC + N   SLC K+   SP +SP
Sbjct:    66 DAPCLCIAF---NNPE--VLKALNLTKENALLLPKACGV-NPDVSLCSKIATPSPIASP 118

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=ISS

GO:0008289 "lipid binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_III1430 hypothetical protein (192 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	187
cd00010	63	cd00010, AAI_LTSS, AAI_LTSS: Alpha-Amylase Inhibit	3e-11
pfam00234	74	pfam00234, Tryp_alpha_amyl, Protease inhibitor/see	2e-08
smart00499	79	smart00499, AAI, Plant lipid transfer protein / se	8e-06
pfam14368	95	pfam14368, LTP_2, Probable lipid transfer	4e-05
cd01960	89	cd01960, nsLTP1, nsLTP1: Non-specific lipid-transf	5e-04
cd04660	73	cd04660, nsLTP_like, nsLTP_like: Non-specific lipi	0.004

>gnl|CDD|237980 cd00010, AAI_LTSS, AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

 Score = 55.9 bits (135), Expect = 3e-11
 Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 7/68 (10%)

Query: 40  MACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVP-KLL 98
             CL +  G  T P  +CCS +K +   DPKCLC  +       G     LG++   + L
Sbjct: 2   APCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALN------GPGASLLGLKNATRAL 55

Query: 99  QLPSACQL 106
            LP+AC L
Sbjct: 56  ALPAACGL 63

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges. Length = 63

>gnl|CDD|215810 pfam00234, Tryp_alpha_amyl, Protease inhibitor/seed storage/LTP family

 Score = 48.7 bits (116), Expect = 2e-08
 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 9/83 (10%)

Query: 32  CSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLG 91
           C + L K   C  + +G    PS++CCS ++ +     +C C  I+    G        G
Sbjct: 1   CGQVLLKLAPCAGYLQGGCQVPSQQCCSQLRQL---QAQCRCTAIRAIVLGIE------G 51

Query: 92  VQVPKLLQLPSACQLKNASTSLC 114
           +       LPS C +       C
Sbjct: 52  INPQAAASLPSMCGVNVPYGIDC 74

This family is composed of trypsin-alpha amylase inhibitors, seed storage proteins and lipid transfer proteins from plants. Length = 74

>gnl|CDD|214698 smart00499, AAI, Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

 Score = 42.0 bits (98), Expect = 8e-06
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 7/75 (9%)

Query: 32  CSEYLQKTMACLDFARGKI--TTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKN 89
           C + L +   CL +  G      PS++CCS ++G+  +  +C C  ++ A  G   +++ 
Sbjct: 1   CGQVLLQLAPCLSYLVGGSRGAPPSQQCCSQLRGL--NSAQCRCLALRAAVLG---ILEI 55

Query: 90  LGVQVPKLLQLPSAC 104
            G+       LPSAC
Sbjct: 56  PGLNAQNAASLPSAC 70

Length = 79

>gnl|CDD|222713 pfam14368, LTP_2, Probable lipid transfer

 Score = 40.2 bits (94), Expect = 4e-05
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 6/61 (9%)

Query: 51  TTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNAS 110
             PS  CC+A+K     D  CLC ++              G+ + + + LP AC L +  
Sbjct: 39  AAPSPACCAALKAAVKADVPCLCDLVTSPL------AAGFGINLTRAVALPKACGLTSPP 92

Query: 111 T 111
           +
Sbjct: 93  S 93

The members of this family are probably involved in lipid transfer. The family has several highly conserved cysteines, paired in various ways. Length = 95

>gnl|CDD|238926 cd01960, nsLTP1, nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

 Score = 37.3 bits (87), Expect = 5e-04
 Identities = 19/79 (24%), Positives = 26/79 (32%), Gaps = 11/79 (13%)

Query: 31  ECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKD-----DDPKCLCYIIKEANGGEGD 85
            C +       CL +  G    PS  CCS VK +        D +  C  +K A      
Sbjct: 2   SCGQVTSLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSA------ 55

Query: 86  MVKNLGVQVPKLLQLPSAC 104
                G+   +   LP  C
Sbjct: 56  AAGISGLNPGRAAGLPGKC 74

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans. Length = 89

>gnl|CDD|240018 cd04660, nsLTP_like, nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3

 Score = 34.3 bits (79), Expect = 0.004
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 13/75 (17%)

Query: 40  MACLDFARG--KITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKL 97
             C  +  G      PS+ECC+A++     D  CLC             +    +   K 
Sbjct: 9   AECQPYVTGPNPPPPPSRECCAALRRA---DLPCLC--------RYKTSLVLQIIDPDKA 57

Query: 98  LQLPSACQLKNASTS 112
           + LP+ C L    +S
Sbjct: 58  VYLPAKCGLPLPPSS 72

Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes. Length = 73

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	187
PF14368	96	LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A	99.6
cd01960	89	nsLTP1 nsLTP1: Non-specific lipid-transfer protein	99.54
cd04660	73	nsLTP_like nsLTP_like: Non-specific lipid-transfer	99.53
cd00010	63	AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI),	99.46
cd01959	66	nsLTP2 nsLTP2: Non-specific lipid-transfer protein	99.27
smart00499	79	AAI Plant lipid transfer protein / seed storage pr	99.08
PF00234	90	Tryp_alpha_amyl: Protease inhibitor/seed storage/L	98.75
PF14547	85	Hydrophob_seed: Hydrophobic seed protein	95.6
cd01958	85	HPS_like HPS_like: Hydrophobic Protein from Soybea	94.97
PF07172	95	GRP: Glycine rich protein family; InterPro: IPR010	90.29
cd00261	110	AAI_SS AAI_SS: Alpha-Amylase Inhibitors (AAIs) and	84.76

>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A

Probab=99.60  E-value=1.4e-16  Score=115.94  Aligned_cols=79  Identities=33%  Similarity=0.733  Sum_probs=49.5

Q ss_pred             CCccchhhhhcccccHHHhhCCCCCCcHHHHHHHhhccCCCCCccceeeeccCCCCCcccccCCCChHHHhhccccCCCC
Q 029795           28 TNKECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLK  107 (187)
Q Consensus        28 a~~~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~alk~v~~~~~~CLC~~i~~~~~~~~~~~~~~~In~~rA~~LP~~Cgv~  107 (187)
                      ...+|.+.+....+|+.|++++ ..|+.+||++++++.+.++.|||+++++.      ....++||.+|++.||++||++
T Consensus        18 ~~~~c~~~l~~c~~~~~~~~~~-~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~------~~~~~~in~~~a~~Lp~~Cg~~   90 (96)
T PF14368_consen   18 CCCSCANSLLPCCPCLCYVTGG-PAPSAACCSALKSVVQADPPCLCQLLNSP------GAPGFGINVTRALALPAACGVP   90 (96)
T ss_dssp             BTTB-HCCCCHH--HHHHHCC------HHHHHHHCC----HCCHHHCCCC-C------CHCHHCCTCHHHHHHHHHCTSS
T ss_pred             CcchhHHHHhccccchhccCCC-CCCCHHHHHHHHHhccCCCCCHHHhcCcc------ccccCCcCHHHHHHHHHHcCCC
Confidence            3477865444444448998854 68999999999999888999999999742      1346789999999999999999


Q ss_pred             CCCCCCC
Q 029795          108 NASTSLC  114 (187)
Q Consensus       108 ~p~~s~C  114 (187)
                      .++ ++|
T Consensus        91 ~~~-~~C   96 (96)
T PF14368_consen   91 VPP-SKC   96 (96)
T ss_dssp             -S-----
T ss_pred             CCC-CCC
Confidence            877 777

>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=99.54  E-value=5.7e-15  Score=107.53  Aligned_cols=72  Identities=26%  Similarity=0.565  Sum_probs=59.6

Q ss_pred             cchhhhhcccccHHHhhCCCCCCcHHHHHHHhhccCC-----CCCccceeeeccCCCCCcccccC-CCChHHHhhccccC
Q 029795           31 ECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDD-----DPKCLCYIIKEANGGEGDMVKNL-GVQVPKLLQLPSAC  104 (187)
Q Consensus        31 ~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~alk~v~~~-----~~~CLC~~i~~~~~~~~~~~~~~-~In~~rA~~LP~~C  104 (187)
                      +|.+++..|.||++|++++...|+++||++++++++.     +.+|+|..+++.       ...+ +||.+|+++||++|
T Consensus         2 ~C~~v~~~l~~C~~y~~g~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~-------~~~~~~i~~~~a~~LP~~C   74 (89)
T cd01960           2 SCGQVTSLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSA-------AAGISGLNPGRAAGLPGKC   74 (89)
T ss_pred             CHHHHHhhHHhHHHHHhCCCCCCChHHhhhhHHHhhccCCCCchhhhhhccccc-------ccccCCCCHHHHHhChHhc
Confidence            6999999999999999988788999999999998754     345777666642       2344 49999999999999


Q ss_pred             CCCCC
Q 029795          105 QLKNA  109 (187)
Q Consensus       105 gv~~p  109 (187)
                      |++.+
T Consensus        75 ~v~~~   79 (89)
T cd01960          75 GVSIP   79 (89)
T ss_pred             ccCCC
Confidence            99975

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.

>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3

Probab=99.53  E-value=8.1e-15  Score=103.46  Aligned_cols=71  Identities=30%  Similarity=0.577  Sum_probs=58.7

Q ss_pred             chhhhhcccccHHHhhCCC--CCCcHHHHHHHhhccCCCCCccceeeeccCCCCCcccccCCCChHHHhhccccCCCCCC
Q 029795           32 CSEYLQKTMACLDFARGKI--TTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNA  109 (187)
Q Consensus        32 C~~~l~~L~pCl~yvtg~~--~~Ps~~CC~alk~v~~~~~~CLC~~i~~~~~~~~~~~~~~~In~~rA~~LP~~Cgv~~p  109 (187)
                      |+.++..|.+|++|+++++  ..|+..||+++|++   +..|+|.+++..        ....||.+||++||++||++++
T Consensus         1 C~~~~~~L~~C~~yl~~~~~~~~Ps~~CC~~vk~~---~~~C~C~~~~~~--------~~~~i~~~~a~~Lp~~Cgv~~p   69 (73)
T cd04660           1 CNMDLDLLAECQPYVTGPNPPPPPSRECCAALRRA---DLPCLCRYKTSL--------VLQIIDPDKAVYLPAKCGLPLP   69 (73)
T ss_pred             CCCCHHHHHHHHHHHcCCCCCCCCCHHHHHHHHcC---CcCCEeeccCCC--------cccccCHHHHHHHHHHcCCCCC
Confidence            5667789999999999875  46999999999985   466999987531        1225999999999999999988


Q ss_pred             CCCCC
Q 029795          110 STSLC  114 (187)
Q Consensus       110 ~~s~C  114 (187)
                      + ++|
T Consensus        70 ~-~~C   73 (73)
T cd04660          70 P-SSC   73 (73)
T ss_pred             C-CCC
Confidence            8 887

Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.

>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

Probab=99.46  E-value=2.5e-14  Score=97.37  Aligned_cols=62  Identities=37%  Similarity=0.852  Sum_probs=53.1

Q ss_pred             ccccHHHhhCCCCCCcHHHHHHHhhccCCCCCccceeeeccCCCCCcccccCCC-ChHHHhhccccCCC
Q 029795           39 TMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLGV-QVPKLLQLPSACQL  106 (187)
Q Consensus        39 L~pCl~yvtg~~~~Ps~~CC~alk~v~~~~~~CLC~~i~~~~~~~~~~~~~~~I-n~~rA~~LP~~Cgv  106 (187)
                      |.||++|++++...|+.+||++++++.+.++.|||+++++..      ....++ |.++++.||++||+
T Consensus         1 L~~C~~y~~~~~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~------~~~~~~~~~~~a~~LP~~Cgv   63 (63)
T cd00010           1 LAPCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALNGPG------ASLLGLKNATRALALPAACGL   63 (63)
T ss_pred             CcchHHHHcCCCCCCChHHHHHHHHHHhcChhhHHHHHcCcc------ccccCcccHHHHHhchHhcCC
Confidence            679999999887789999999999999889999999998642      122345 79999999999996

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.

>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=99.27  E-value=3.8e-12  Score=88.72  Aligned_cols=62  Identities=26%  Similarity=0.515  Sum_probs=51.8

Q ss_pred             hhcccccHHHhhCCCCCCcHHHHHHHhhccCCCCCccceeeeccCCCCCcccccCCCChHHHhhccccCCCCCC
Q 029795           36 LQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNA  109 (187)
Q Consensus        36 l~~L~pCl~yvtg~~~~Ps~~CC~alk~v~~~~~~CLC~~i~~~~~~~~~~~~~~~In~~rA~~LP~~Cgv~~p  109 (187)
                      ..+|.+|++|++++ .+||.+||+.||+.    ..|||.|+++.      .+ ...||.++|++||++||++.|
T Consensus         3 ~~~L~~C~~ai~~~-~~Ps~~CC~~Lk~~----~~CLC~y~~~p------~l-~~~i~~~~A~~l~~~Cgv~~P   64 (66)
T cd01959           3 PTQLSPCLPAILGG-SPPSAACCAKLKEQ----QSCLCQYAKNP------SL-KQYVNSPNARKVLAACGVPYP   64 (66)
T ss_pred             hhhcccCHHHHhCC-CCCCHHHHHHHhcC----CCCeeeeecCc------cH-HhhcCcHHHHHHHHHcCCCCC
Confidence            45899999999976 58999999999973    48999999742      22 335999999999999999876

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp

>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

Probab=99.08  E-value=1.4e-10  Score=79.94  Aligned_cols=77  Identities=30%  Similarity=0.683  Sum_probs=58.7

Q ss_pred             chhhhhcccccHHHhhCC--CCCCcHHHHHHHhhccCCCCCccceeeeccCCCCCcccccCCCChHHHhhccccCCCCCC
Q 029795           32 CSEYLQKTMACLDFARGK--ITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNA  109 (187)
Q Consensus        32 C~~~l~~L~pCl~yvtg~--~~~Ps~~CC~alk~v~~~~~~CLC~~i~~~~~~~~~~~~~~~In~~rA~~LP~~Cgv~~p  109 (187)
                      |...+.++.+|++|+++.  ...|+.+||++|+++.  +..|+|.+++....+.   .....++..++..||+.||+..+
T Consensus         1 C~~~~~~~~~c~~~~~~~~~~~~p~~~CC~~l~~~~--~~~C~C~~~~~~~~~~---~~~~~~~~~~a~~lp~~C~~~~~   75 (79)
T smart00499        1 CGQVLLQLAPCLSYLTGGSPGAPPSQQCCSQLRGLN--SAQCRCLALRAAVLGI---LEIPGVNAQNAASLPSACGVPPP   75 (79)
T ss_pred             ChhhhhhHHhhHHHHcCCCCCCCCchHHHHHHHHhc--ccCCcchhhhcccccc---cchhhhhHHHHHhhHHhcCCCCC
Confidence            667788888999999986  4689999999999995  6889999887532110   00002699999999999999865


Q ss_pred             CCCCC
Q 029795          110 STSLC  114 (187)
Q Consensus       110 ~~s~C  114 (187)
                      + +.|
T Consensus        76 ~-~~C   79 (79)
T smart00499       76 Y-TDC   79 (79)
T ss_pred             C-CCC
Confidence            3 444

>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]

Probab=98.75  E-value=3.1e-10  Score=81.88  Aligned_cols=74  Identities=23%  Similarity=0.579  Sum_probs=54.9

Q ss_pred             hcccccHHHhhCCCCCCcHHHHHHHhhccCCCCCccceeeeccCCCCC----cccccCCCChHHHhhccccCCCCCCCCC
Q 029795           37 QKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEG----DMVKNLGVQVPKLLQLPSACQLKNASTS  112 (187)
Q Consensus        37 ~~L~pCl~yvtg~~~~Ps~~CC~alk~v~~~~~~CLC~~i~~~~~~~~----~~~~~~~In~~rA~~LP~~Cgv~~p~~s  112 (187)
                      ..+.+|..|++++...|+.+||++|+++   ++.|+|..++....+..    ..-...+++..+|..||+.||+..+. .
T Consensus        13 ~~l~~c~~~~~~~~~~~~~~CC~~L~~l---~~~C~C~~i~~~~~~~~~q~~~~~~~~~~~~~~a~~LP~~C~v~~~~-~   88 (90)
T PF00234_consen   13 VRLSPCLPYLQGGCQQPSQQCCQQLRQL---DPQCRCEAIRQMVRQVIQQQQQGGQEMQIMAQRAQNLPSMCNVSPPY-T   88 (90)
T ss_dssp             SHHHGGHHHHTTSSSHHHHHHHHHHHHH---HHHHHHHHHHHHHHHSHHCTSTCSHHHHHHHHHHHHHHHHTTSSSSS-S
T ss_pred             ccccccHHHHhcccccchHHHhHHHHHH---hHHhhCHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHCCCCCCC-C
Confidence            4489999999987668999999999999   58999999875321000    00001368999999999999998654 3


Q ss_pred             CC
Q 029795          113 LC  114 (187)
Q Consensus       113 ~C  114 (187)
                      +|
T Consensus        89 ~C   90 (90)
T PF00234_consen   89 DC   90 (90)
T ss_dssp             -G
T ss_pred             CC
Confidence            55

The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....

>PF14547 Hydrophob_seed: Hydrophobic seed protein

Probab=95.60  E-value=0.0034  Score=45.89  Aligned_cols=77  Identities=32%  Similarity=0.566  Sum_probs=51.6

Q ss_pred             chhhhhcccccHHHhh----CCCCCCcHHHHHHHhhccCCCC-CccceeeeccCCCCCccccc-CCCChHH-HhhccccC
Q 029795           32 CSEYLQKTMACLDFAR----GKITTPSKECCSAVKGIKDDDP-KCLCYIIKEANGGEGDMVKN-LGVQVPK-LLQLPSAC  104 (187)
Q Consensus        32 C~~~l~~L~pCl~yvt----g~~~~Ps~~CC~alk~v~~~~~-~CLC~~i~~~~~~~~~~~~~-~~In~~r-A~~LP~~C  104 (187)
                      |.-+..+|--|.+.+.    .-+..+..+||.-++++.+.+. .|||..+|..       ..+ .++|... ...|-..|
T Consensus         2 CP~d~lkLgvC~~vL~l~~~~~g~~~~~~CC~li~gL~d~~AA~CLC~aika~-------vlg~i~~~ipv~l~~lln~C   74 (85)
T PF14547_consen    2 CPRDALKLGVCANVLGLVNLVIGNPPRQPCCSLIAGLADLDAAVCLCTAIKAN-------VLGLINVNIPVALNLLLNAC   74 (85)
T ss_pred             CCCcchhhhhhhhhhhhhccccCCCCCCCcChHHhCcccchHHHHHHHHHhhh-------cccccccccccHHHHHHHHh
Confidence            4444557788888881    1124578999999999987654 6999988731       123 3333433 33567889


Q ss_pred             CCCCCCCCCCC
Q 029795          105 QLKNASTSLCP  115 (187)
Q Consensus       105 gv~~p~~s~C~  115 (187)
                      |...|+..+|+
T Consensus        75 Gk~~p~gf~C~   85 (85)
T PF14547_consen   75 GKTVPSGFTCP   85 (85)
T ss_pred             CCcCcCCCcCC
Confidence            98878777884

>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins

Probab=94.97  E-value=0.028  Score=41.11  Aligned_cols=77  Identities=25%  Similarity=0.495  Sum_probs=51.7

Q ss_pred             cchhhhhcccccHHHhhCC----CCCCcHHHHHHHhhccCCCC-CccceeeeccCCCCCcccccCCCChHHHh-hccccC
Q 029795           31 ECSEYLQKTMACLDFARGK----ITTPSKECCSAVKGIKDDDP-KCLCYIIKEANGGEGDMVKNLGVQVPKLL-QLPSAC  104 (187)
Q Consensus        31 ~C~~~l~~L~pCl~yvtg~----~~~Ps~~CC~alk~v~~~~~-~CLC~~i~~~~~~~~~~~~~~~In~~rA~-~LP~~C  104 (187)
                      .|--+..+|--|.+-+..-    +..|..+||.-++.+.+.+. .|||..+|..       ..++.+|....+ .|-..|
T Consensus         3 ~CP~dalkLgvCanvL~l~~~~~g~~~~~~CC~ll~GL~dldAA~CLCtaikan-------~lgi~~~~pv~l~llln~C   75 (85)
T cd01958           3 TCPRDALKLGVCANVLGLSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKAN-------ILGISINIPVALSLLLNSC   75 (85)
T ss_pred             CCCcchHHhchhHhhhhccccccCCCccchHHHHHcCchhhheeeeeeeeeecc-------ccCcccccChhHHHHHHHH
Confidence            4665556777888877421    24677999999999987754 6999988731       233334444444 445679


Q ss_pred             CCCCCCCCCC
Q 029795          105 QLKNASTSLC  114 (187)
Q Consensus       105 gv~~p~~s~C  114 (187)
                      |-..|+.++|
T Consensus        76 Gk~~P~gf~C   85 (85)
T cd01958          76 GRNVPPGFTC   85 (85)
T ss_pred             cCcCCCCCcC
Confidence            9887776666

In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset

>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins

Probab=90.29  E-value=0.21  Score=37.09  Aligned_cols=18  Identities=33%  Similarity=0.458  Sum_probs=14.5

Q ss_pred             CcchhHHHHHHHHHHHHH
Q 029795            2 MGMKKGFLCGILFGFIAL   19 (187)
Q Consensus         2 M~~~~~~~~~lll~~~~~   19 (187)
                      |++|.+++|+|+|+++++
T Consensus         1 MaSK~~llL~l~LA~lLl   18 (95)
T PF07172_consen    1 MASKAFLLLGLLLAALLL   18 (95)
T ss_pred             CchhHHHHHHHHHHHHHH
Confidence            899999888888876554

Some of them may be involved in resistance to environmental stress [].

>cd00261 AAI_SS AAI_SS: Alpha-Amylase Inhibitors (AAIs) and Seed Storage (SS) Protein subfamily; composed of cereal-type AAIs and SS proteins

Probab=84.76  E-value=0.26  Score=36.52  Aligned_cols=74  Identities=22%  Similarity=0.486  Sum_probs=46.1

Q ss_pred             hcccccHHHhhCCC---C-----------CCcHHHHHHHhhccCCCCCccceeeeccCCCCCccc---------ccCCCC
Q 029795           37 QKTMACLDFARGKI---T-----------TPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMV---------KNLGVQ   93 (187)
Q Consensus        37 ~~L~pCl~yvtg~~---~-----------~Ps~~CC~alk~v~~~~~~CLC~~i~~~~~~~~~~~---------~~~~In   93 (187)
                      ..|.+|..|+....   .           .....||..|+.+   +..|.|..|...........         .....-
T Consensus        13 ~~L~~C~~yl~qq~~~~~~~~~~~~~~~~~~~qqCCqqL~~i---~~qcrC~al~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (110)
T cd00261          13 QPLNSCREYLRQQCSGVGGPPVWPQQSCEVLRQQCCQQLAQI---PEQCRCEALRQMVQGVIQQQQQQQEQQQGQEVERM   89 (110)
T ss_pred             ccCcHHHHHHHHhccCCCCCCCcCccccHHHHHHHHHHHHhC---cHhhhHHHHHHHHHHHHHhhhccccccCcChHHHH
Confidence            46889999985321   1           1248999999988   47899998864321100000         001123


Q ss_pred             hHHHhhccccCCCCCCCCCCCC
Q 029795           94 VPKLLQLPSACQLKNASTSLCP  115 (187)
Q Consensus        94 ~~rA~~LP~~Cgv~~p~~s~C~  115 (187)
                      ...|..||+.||+..  ...|.
T Consensus        90 ~~~a~~Lp~~C~~~~--~~~C~  109 (110)
T cd00261          90 RQAAQNLPSMCNLYP--PPYCP  109 (110)
T ss_pred             HHHHHhhchhcCCCC--CCCCC
Confidence            467889999999984  23564

They are mainly present in the seeds of a variety of plants. AAIs play an important role in the natural defenses of plants against insects and pathogens such as fungi, bacteria and viruses. AAIs impede the digestion of plant starch and proteins by inhibiting digestive alpha-amylases and proteinases. Also included in this subfamily are SS proteins such as 2S albumin, gamma-gliadin, napin, and prolamin. These AAIs and SS proteins are also known allergens in humans.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	187
1afh_A	93	Maize nonspecific lipid transfer protein; lipid-bi	7e-06

>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A* Length = 93

 Score = 41.8 bits (98), Expect = 7e-06
 Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 11/81 (13%)

Query: 32  CSEYLQKTMACLDFARGKITTPSKECCSAVKGIKD-----DDPKCLCYIIKEANGGEGDM 86
           C +       C+ +ARG+ + PS  CCS V+ + +      D +  C  +K A  G    
Sbjct: 4   CGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVS-- 61

Query: 87  VKNLGVQVPKLLQLPSACQLK 107
               G+       +PS C + 
Sbjct: 62  ----GLNAGNAASIPSKCGVS 78

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	187
2ljo_A	93	Non-specific lipid-transfer protein 2; lipid trans	99.61
1afh_A	93	Maize nonspecific lipid transfer protein; lipid-bi	99.6
2rkn_A	77	DIR1 protein, AT5G48485; LTP, defense signaling pr	99.59
1bwo_A	90	NS-LTP1, nonspecific lipid-transfer protein; wheat	99.58
2alg_A	92	Non-specific lipid transfer protein; LTP, NS-LTP,	99.58
1siy_A	91	LTP 1, NS-LTP1, nonspecific lipid-transfer protein	99.58
1t12_A	91	LTP 1, nonspecific lipid-transfer protein 1; cyste	99.58
1l6h_A	69	LTP2, non-specific lipid transfer protein; NSLTP2,	99.38
1n89_A	67	Lipid transfer protein; lipid transport; HET: PGM;	99.36
3ob4_A	500	Conglutin, maltose ABC transporter periplasmic pro	95.26
1hyp_A	80	Hydrophobic protein from soybean; hydrophobic SEED	95.17
1bea_A	127	Bifunctional amylase/serine protease inhibitor; am	94.51
1s6d_A	103	Albumin 8; all helix, folded LEAF, right-handed su	94.37
1b1u_A	122	Protein (alpha-amylase/trypsin inhibitor RATI); bi	93.78
1sm7_A	109	Recombinant IB pronapin; all alpha-helix, right-ha	92.6
1hss_A	124	0.19 alpha-amylase inhibitor; cereal inhibitor, an	92.21
2lvf_A	114	2S albumin; allergen, copper binding, hydrophobic	91.94
1w2q_A	127	Conglutin, ARA H 6; allergen, allergene; NMR {Arac	91.15
1psy_A	125	2S albumin, RICC3; albumin SEED protein, SEED stor	90.46
1pnb_B	75	Napin BNIB; napin IA and IB, albumin SEED protein,	90.25
2ds2_B	72	Sweet protein mabinlin-2 chain B; plant protein, S	89.32

>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}

Probab=99.61  E-value=4.5e-17  Score=119.42  Aligned_cols=81  Identities=25%  Similarity=0.521  Sum_probs=67.6

Q ss_pred             ccchhhhhcccccHHHhhCCCCCCcHHHHHHHhhccCC-----CCCccceeeeccCCCCCcccccCCCChHHHhhccccC
Q 029795           30 KECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDD-----DPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSAC  104 (187)
Q Consensus        30 ~~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~alk~v~~~-----~~~CLC~~i~~~~~~~~~~~~~~~In~~rA~~LP~~C  104 (187)
                      .+|++++..|+||++|++++. .|+.+||++++++++.     +++|+|..+++..+      ...+||.+||.+||++|
T Consensus         2 isC~~v~~~L~pCl~Yv~g~~-~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~------~~~~in~~~a~~LP~~C   74 (93)
T 2ljo_A            2 ISCGAVTSDLSPCLTYLTGGP-GPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAG------SITKLNTNNAAALPGKC   74 (93)
T ss_dssp             CSSHHHHHHHHHHHHHHTTSS-CCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGG------GCTTCCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHhHHHHHcCCC-CCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhh------ccCCcCHHHHHhhhHhc
Confidence            579999999999999999874 6999999999999653     46799988886431      23589999999999999


Q ss_pred             CCCCC-C---CCCCCCC
Q 029795          105 QLKNA-S---TSLCPKL  117 (187)
Q Consensus       105 gv~~p-~---~s~C~~~  117 (187)
                      |+++| +   .++|+++
T Consensus        75 gV~~p~~Is~~~dC~~v   91 (93)
T 2ljo_A           75 GVNIPYKISTTTNCNTV   91 (93)
T ss_dssp             TCCCSSCCSTTCCGGGC
T ss_pred             CCCCCCCCCCCCCCCCC
Confidence            99987 4   4589875

>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*

Probab=99.60  E-value=9.2e-17  Score=117.50  Aligned_cols=79  Identities=25%  Similarity=0.659  Sum_probs=64.5

Q ss_pred             ccchhhhhcccccHHHhhCCCCCCcHHHHHHHhhccC-------CCCCccceeeeccCCCCCcccccC-CCChHHHhhcc
Q 029795           30 KECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKD-------DDPKCLCYIIKEANGGEGDMVKNL-GVQVPKLLQLP  101 (187)
Q Consensus        30 ~~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~alk~v~~-------~~~~CLC~~i~~~~~~~~~~~~~~-~In~~rA~~LP  101 (187)
                      .+|++++..|.||++|++++...|+++||++|+++++       .+..|+|.  +...       ..+ +||.++|++||
T Consensus         2 ~~C~~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~--~~~~-------~~~~~in~~~A~~LP   72 (93)
T 1afh_A            2 ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCL--KNAA-------AGVSGLNAGNAASIP   72 (93)
T ss_dssp             CSSHHHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHHH--HHHH-------TTSTTCCHHHHHHHH
T ss_pred             CChHHHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEee--cccc-------ccccCcCHHHHHHHH
Confidence            5799999999999999998877899999999999962       13689997  3221       123 89999999999


Q ss_pred             ccCCCCCC-CC---CCCCCC
Q 029795          102 SACQLKNA-ST---SLCPKL  117 (187)
Q Consensus       102 ~~Cgv~~p-~~---s~C~~~  117 (187)
                      ++||++++ ++   ++|+++
T Consensus        73 ~~C~v~~p~~is~~~dC~~v   92 (93)
T 1afh_A           73 SKCGVSIPYTISTSTDCSRV   92 (93)
T ss_dssp             HHHHCCCSSCCSTTCCSSSC
T ss_pred             HHcCCCCCCCCCCCCCCccC
Confidence            99999986 44   499875

>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}

Probab=99.59  E-value=1.5e-16  Score=112.43  Aligned_cols=72  Identities=28%  Similarity=0.502  Sum_probs=60.8

Q ss_pred             ccchhhhhcccccHHHhhC-CCCCCcHHHHHHHhhccCCCCCccceeeeccCCCCCcccccCCCChHHHhhccccCCCCC
Q 029795           30 KECSEYLQKTMACLDFARG-KITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKN  108 (187)
Q Consensus        30 ~~C~~~l~~L~pCl~yvtg-~~~~Ps~~CC~alk~v~~~~~~CLC~~i~~~~~~~~~~~~~~~In~~rA~~LP~~Cgv~~  108 (187)
                      .+|++++.+|+||++|+++ +...|+.+||++||+   .++.|||.++++      +....++||.++|+.||++||+++
T Consensus         3 ~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~---~~~~ClC~~~~~------~~~~~~gin~~~A~~LP~~Cgv~~   73 (77)
T 2rkn_A            3 DLCGMSQDELNECKPAVSKENPTSPSQPCCTALQH---ADFACLCGYKNS------PWLGSFGVDPELASALPKQCGLAN   73 (77)
T ss_dssp             CBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTT---CCHHHHHTTTTC------HHHHHHTBCHHHHHHHHHHTTCSC
T ss_pred             chHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHh---cCcCCcCcccCC------cchhhcCcCHHHHHHHHHHcCCCC
Confidence            6799999999999999997 356899999999997   357999998853      123456899999999999999987


Q ss_pred             CC
Q 029795          109 AS  110 (187)
Q Consensus       109 p~  110 (187)
                      |+
T Consensus        74 p~   75 (77)
T 2rkn_A           74 AP   75 (77)
T ss_dssp             CC
T ss_pred             CC
Confidence            63

>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*

Probab=99.58  E-value=1.3e-16  Score=116.03  Aligned_cols=76  Identities=21%  Similarity=0.595  Sum_probs=62.3

Q ss_pred             cchhhhhcccccHHHhhCCCCCCcHHHHHHHhhccCC-------CCCccceeeeccCCCCCcccccC-CCChHHHhhccc
Q 029795           31 ECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDD-------DPKCLCYIIKEANGGEGDMVKNL-GVQVPKLLQLPS  102 (187)
Q Consensus        31 ~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~alk~v~~~-------~~~CLC~~i~~~~~~~~~~~~~~-~In~~rA~~LP~  102 (187)
                      +|++++..|.||++|+++++. |+.+||++|+++++.       +..|+|.  ++..       ..+ +||.++|++||+
T Consensus         2 ~C~~v~~~L~pCl~y~~~~~~-Ps~~CC~~lk~l~~~a~t~~dr~~~ClCl--k~~~-------~~~~~in~~~A~~LP~   71 (90)
T 1bwo_A            2 DCGHVDSLVRPCLSYVQGGPG-PSGQCCDGVKNLHNQARSQSDRQSACNCL--KGIA-------RGIHNLNEDNARSIPP   71 (90)
T ss_dssp             CHHHHHHHHGGGHHHHTTCSC-CCHHHHHHHHHHHHHCCSHHHHHHHHHHH--HHHH-------TTCTTCCHHHHHTHHH
T ss_pred             CHHHHHHhhcccHHHHcCCCC-CCHHHhHHHHHHHhhccCCCCCCccCcCc--cCch-------hccCCcCHHHHHHHHH
Confidence            699999999999999998865 999999999998732       4689995  5432       233 899999999999


Q ss_pred             cCCCCCC-CC---CCCCC
Q 029795          103 ACQLKNA-ST---SLCPK  116 (187)
Q Consensus       103 ~Cgv~~p-~~---s~C~~  116 (187)
                      +||+++| ++   ++|++
T Consensus        72 ~C~v~~p~~is~~~dC~~   89 (90)
T 1bwo_A           72 KCGVNLPYTISLNIDCSR   89 (90)
T ss_dssp             HHTCCCSSCCCTTCCGGG
T ss_pred             HcCCCCCCCCCCCCCCCC
Confidence            9999976 44   48875

>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*

Probab=99.58  E-value=1.1e-16  Score=116.95  Aligned_cols=78  Identities=19%  Similarity=0.537  Sum_probs=63.9

Q ss_pred             ccchhhhhcccccHHHhhCCCCCCcHHHHHHHhhcc-------CCCCCccceeeeccCCCCCcccccC-CCChHHHhhcc
Q 029795           30 KECSEYLQKTMACLDFARGKITTPSKECCSAVKGIK-------DDDPKCLCYIIKEANGGEGDMVKNL-GVQVPKLLQLP  101 (187)
Q Consensus        30 ~~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~alk~v~-------~~~~~CLC~~i~~~~~~~~~~~~~~-~In~~rA~~LP  101 (187)
                      .+|++++..|.||++|++++. .|+.+||++||+++       +.++.|||.+...         ..+ +||.++|++||
T Consensus         2 ~~C~~v~~~L~pCl~y~~~~~-~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~---------~~~~~in~~~A~~LP   71 (92)
T 2alg_A            2 ITCGQVSSSLAPCIPYVRGGG-AVPPACCNGIRNVNNLARTTPDRQAACNCLKQLS---------ASVPGVNPNNAAALP   71 (92)
T ss_dssp             CCHHHHHHHHGGGHHHHHHCS-CCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHH---------HHSTTCCHHHHHHHH
T ss_pred             CChHHHHHhccCcHHHHcCCC-CCCHHHHHHHHHHHhhhcccCCCCcCCccccCcc---------cccCccChHHHHHHH
Confidence            579999999999999999875 58899999999987       3457899984321         223 89999999999


Q ss_pred             ccCCCCCC-CC---CCCCCC
Q 029795          102 SACQLKNA-ST---SLCPKL  117 (187)
Q Consensus       102 ~~Cgv~~p-~~---s~C~~~  117 (187)
                      ++||+++| ++   ++|+++
T Consensus        72 ~~Cgv~~p~~is~~~dC~~v   91 (92)
T 2alg_A           72 GKCGVSIPYKISASTNCATV   91 (92)
T ss_dssp             HHTTCCCSSCSSTTSCGGGC
T ss_pred             HHcCCCCCCCCCCCCCCccC
Confidence            99999986 43   488864

>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}

Probab=99.58  E-value=2.6e-16  Score=114.69  Aligned_cols=77  Identities=22%  Similarity=0.525  Sum_probs=63.5

Q ss_pred             cchhhhhcccccHHHhhCCCCCCcHHHHHHHhhccCC-------CCCccceeeeccCCCCCcccccC-CCChHHHhhccc
Q 029795           31 ECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDD-------DPKCLCYIIKEANGGEGDMVKNL-GVQVPKLLQLPS  102 (187)
Q Consensus        31 ~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~alk~v~~~-------~~~CLC~~i~~~~~~~~~~~~~~-~In~~rA~~LP~  102 (187)
                      +|++++..|.||++|+++++. |+.+||++|+++++.       +..|+|.  ++..       ..+ +||.++|++||+
T Consensus         2 ~C~~v~~~L~pCl~yv~~~~~-Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~--k~~~-------~~~~~in~~~A~~LP~   71 (91)
T 1siy_A            2 TCGQVQGNLAQCIGFLQKGGV-VPPSCCTGVKNILNSSRTTADRRAVCSCL--KAAA-------GAVRGINPNNAEALPG   71 (91)
T ss_dssp             CTTTTHHHHHHHHHHHTSCSC-CCHHHHHHHHHHHTTTCSSHHHHHHHHHH--HHHT-------TCCSSCCHHHHHHHHH
T ss_pred             CHHHHHHhccCcHHHHhCCCC-CcHHHHHHHHHHHhhhccCCCCCcCCccc--CCcc-------cccCCcCHHHHHHHHH
Confidence            699999999999999998765 999999999998643       4589997  5432       234 899999999999


Q ss_pred             cCCCCCC-CC---CCCCCC
Q 029795          103 ACQLKNA-ST---SLCPKL  117 (187)
Q Consensus       103 ~Cgv~~p-~~---s~C~~~  117 (187)
                      +||+++| ++   ++|+++
T Consensus        72 ~Cgv~~p~~is~~~dC~~v   90 (91)
T 1siy_A           72 KCGVNIPYKISTSTNCNSI   90 (91)
T ss_dssp             HHTCCCSSCSCTTSCSSTT
T ss_pred             HcCCCCCCCCCCCCCCccC
Confidence            9999976 33   499875

>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}

Probab=99.58  E-value=1.8e-16  Score=115.64  Aligned_cols=77  Identities=26%  Similarity=0.595  Sum_probs=63.8

Q ss_pred             ccchhhhhcccccHHHhhCCCCCCcHHHHHHHhhccCC-------CCCccceeeeccCCCCCcccccC-CCChHHHhhcc
Q 029795           30 KECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDD-------DPKCLCYIIKEANGGEGDMVKNL-GVQVPKLLQLP  101 (187)
Q Consensus        30 ~~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~alk~v~~~-------~~~CLC~~i~~~~~~~~~~~~~~-~In~~rA~~LP  101 (187)
                      .+|++++..|.||++|++++.. |+ +||++|+++++.       ++.|+|.  ++..       ..+ +||.++|++||
T Consensus         2 ~~C~~v~~~L~pCl~y~~~~~~-P~-~CC~gv~~l~~~a~t~~dr~~~ClCl--k~~~-------~~~~~in~~~A~~LP   70 (91)
T 1t12_A            2 ITCGQVTSNLAPCLAYLRNTGP-LG-RCCGGVKALVNSARTTEDRQIACTCL--KSAA-------GAISGINLGKAAGLP   70 (91)
T ss_dssp             CCHHHHHHHTHHHHHHHTTSSC-CT-THHHHHHHHHHTTCSTHHHHHHHHHH--HHHH-------HHCTTCCHHHHHHHH
T ss_pred             CChHHHHHhccCcHHHHcCCCC-hH-HHHHHHHHHHhhccCCCCCCccCCCc--cccc-------cccCCcChhHHHHHH
Confidence            5799999999999999998876 88 999999998754       4789996  4321       233 89999999999


Q ss_pred             ccCCCCCC-CC---CCCCCC
Q 029795          102 SACQLKNA-ST---SLCPKL  117 (187)
Q Consensus       102 ~~Cgv~~p-~~---s~C~~~  117 (187)
                      ++||++++ ++   ++|+++
T Consensus        71 ~~C~v~~p~~is~~~dC~~v   90 (91)
T 1t12_A           71 STCGVNIPYKISPSTDCSKV   90 (91)
T ss_dssp             HHTTCCCSSCSSSSSCCTTC
T ss_pred             HHcCCCCCCCCCCCCCCccC
Confidence            99999986 44   499875

>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1

Probab=99.38  E-value=5.4e-14  Score=97.54  Aligned_cols=65  Identities=22%  Similarity=0.517  Sum_probs=54.0

Q ss_pred             cchhhhhcccccHHHhhCCCCCCcHHHHHHHhhccCCCCCccceeeeccCCCCCcccccCCCChHHHhhccccCCCCCC
Q 029795           31 ECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNA  109 (187)
Q Consensus        31 ~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~alk~v~~~~~~CLC~~i~~~~~~~~~~~~~~~In~~rA~~LP~~Cgv~~p  109 (187)
                      .|+  ..+|.||++|++++ ..|+.+||++||+.    ..|+|.++++..       ...+||.++|++||++||+++|
T Consensus         2 ~C~--~~~L~pC~~~v~~~-~~Ps~~CC~~lk~~----~~ClC~~~k~~~-------~~~~in~~~A~~Lp~~Cgv~~P   66 (69)
T 1l6h_A            2 GCN--AGQLTVCTGAIAGG-ARPTAACCSSLRAQ----QGCFCQFAKDPR-------YGRYVNSPNARKAVSSCGIALP   66 (69)
T ss_dssp             CST--TTTHHHHHHHHTTC-CSTTHHHHHHHHHH----HHHHHHHTTCSS-------HHHHTTTTTGGGCCCCCSSCSC
T ss_pred             CCC--hhhcccCHHHHcCC-CCCCHHHHHhhCCC----CCCCCccccCcc-------cccccCHHHHHHHHHHcCCCCC
Confidence            365  56899999999987 47999999999975    689999887421       2346999999999999999875

>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*

Probab=99.36  E-value=7.5e-14  Score=96.30  Aligned_cols=62  Identities=19%  Similarity=0.447  Sum_probs=52.4

Q ss_pred             hhcccccHHHhhCCCCCCcHHHHHHHhhccCCCCCccceeeeccCCCCCcccccCCCChHHHhhccccCCCCCC
Q 029795           36 LQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNA  109 (187)
Q Consensus        36 l~~L~pCl~yvtg~~~~Ps~~CC~alk~v~~~~~~CLC~~i~~~~~~~~~~~~~~~In~~rA~~LP~~Cgv~~p  109 (187)
                      ..+|.||++|++++ ..|+.+||++||+.    ..|+|.++++..       ...+||.++|++||++||+++|
T Consensus         4 ~~~L~pC~~~v~~~-~~Ps~~CC~~lk~~----~~ClC~~~k~~~-------~~~~in~~~A~~Lp~~Cgv~~P   65 (67)
T 1n89_A            4 ASQLAVCASAILSG-AKPSGECCGNLRAQ----QGCFCQYAKDPT-------YGQYIRSPHARDTLTSCGLAVP   65 (67)
T ss_dssp             SSTTHHHHHHHTTC-CCCCHHHHHHHHHH----SSHHHHGGGCST-------THHHHTCHHHHHHHHHHTSCCS
T ss_pred             hhhcccCHHHHcCC-CCCCHHHHHhhCCC----CCCCCccccCcc-------cccccCHHHHHHHHHHcCCCCC
Confidence            46899999999987 47999999999975    789999987531       2346999999999999999876

>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}

Probab=95.26  E-value=0.0012  Score=59.38  Aligned_cols=58  Identities=19%  Similarity=0.582  Sum_probs=36.3

Q ss_pred             HHHHHHHhhccCCCCCccceeeeccCCCCCcccc---cCCCChHHHhhccccCCCCCCCCCCCC
Q 029795           55 KECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVK---NLGVQVPKLLQLPSACQLKNASTSLCP  115 (187)
Q Consensus        55 ~~CC~alk~v~~~~~~CLC~~i~~~~~~~~~~~~---~~~In~~rA~~LP~~Cgv~~p~~s~C~  115 (187)
                      .+||+.|+++-+ ++.|.|..|++..........   ..-.=..+|..||..||+..|  ..|+
T Consensus       429 ~~cc~~l~~~~~-~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~c~~~~~--~~c~  489 (500)
T 3ob4_A          429 ERCCNELNEFEN-NQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAP--QRCD  489 (500)
T ss_dssp             HHHHHHHGGGTT-CHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHHTHHHHTTCCCC--SCCC
T ss_pred             HHHHHHHHhCCc-ccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHhhCchhcCCCCC--ccCC
Confidence            799999999832 279999988753210000000   000113559999999999733  5798

>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1

Probab=95.17  E-value=0.0041  Score=43.91  Aligned_cols=72  Identities=24%  Similarity=0.644  Sum_probs=53.3

Q ss_pred             ccchhhhhcccccHHHhhCCCCCCcHHHHHHHhhccCCC-CCccceeeeccCCCCCcccccCCCChHHHhh-ccccCCCC
Q 029795           30 KECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDD-PKCLCYIIKEANGGEGDMVKNLGVQVPKLLQ-LPSACQLK  107 (187)
Q Consensus        30 ~~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~alk~v~~~~-~~CLC~~i~~~~~~~~~~~~~~~In~~rA~~-LP~~Cgv~  107 (187)
                      ..|-    +|--|.+-+.+. ..|..+||+-++.+.+.+ ..|||..+|         ..++ +|...++. |-..||..
T Consensus         6 ~~CP----kLgvCanvL~g~-~~~~~~CC~Ll~GL~dleAAvCLCtaik---------~Lgi-lnlpv~L~llln~Cgk~   70 (80)
T 1hyp_A            6 PSCP----DLSICLNILGGS-LGTVDDCCALIGGLGDIEAIVCLCIQLR---------ALGI-LNLNRNLQLILNSCGRS   70 (80)
T ss_dssp             CCSC----CCGGGGGGGGTC-CTTHHHHHHHHHTSCHHHHHHHHHHHHH---------HHTC-SCHHHHHHHHHHHTTCS
T ss_pred             CCCC----chhHHHHHhCcC-CCCCCccchhhhCcchhhhhhhhhhhcc---------ccce-eecChhHHHHHHHhCCc
Confidence            5576    788899888653 347789999999997554 469998775         1234 57766665 56789999


Q ss_pred             CCCCCCCCC
Q 029795          108 NASTSLCPK  116 (187)
Q Consensus       108 ~p~~s~C~~  116 (187)
                      .|+.++|+.
T Consensus        71 ~P~gF~C~~   79 (80)
T 1hyp_A           71 YPSNATCPR   79 (80)
T ss_dssp             SCCCCCCSC
T ss_pred             CcCCCCCCC
Confidence            888889973

>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A

Probab=94.51  E-value=0.015  Score=44.32  Aligned_cols=79  Identities=20%  Similarity=0.376  Sum_probs=50.1

Q ss_pred             hcccccHHHhhCC-----CCCC----cHHHHHHHhhccCCCCCccceeeeccCCCCCcc-----ccc-CCCC--------
Q 029795           37 QKTMACLDFARGK-----ITTP----SKECCSAVKGIKDDDPKCLCYIIKEANGGEGDM-----VKN-LGVQ--------   93 (187)
Q Consensus        37 ~~L~pCl~yvtg~-----~~~P----s~~CC~alk~v~~~~~~CLC~~i~~~~~~~~~~-----~~~-~~In--------   93 (187)
                      +.|-.|..|+...     ...|    ...||..|+++   ++.|.|..|....++....     ..+ ++.-        
T Consensus        15 ~pL~~CR~Yv~~q~C~~g~~~p~e~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~pgC~re~~   91 (127)
T 1bea_A           15 NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQ   91 (127)
T ss_dssp             SCCHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHTS---CGGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTBCHHHH
T ss_pred             ccchHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhcccccccccccccccCCCcHHHH
Confidence            4577999999522     1123    45699999998   4899999887654321000     001 1111        


Q ss_pred             hHHHhhc--cccCCCCCCCCC-CCCCCC
Q 029795           94 VPKLLQL--PSACQLKNASTS-LCPKLL  118 (187)
Q Consensus        94 ~~rA~~L--P~~Cgv~~p~~s-~C~~~l  118 (187)
                      ...|..|  |..||+..++.+ .|.-++
T Consensus        92 ~~~A~~Lv~P~~Cnl~~~~g~~~C~~~~  119 (127)
T 1bea_A           92 RGFAATLVTEAECNLATISGVAECPWIL  119 (127)
T ss_dssp             HHHHTTTTSTTTTCCCCTTSSSCCTTTC
T ss_pred             HHHHHhcCCcccCCCCCCCCCCCCCccc
Confidence            3458889  999999876443 787643

>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3

Probab=94.37  E-value=0.025  Score=41.46  Aligned_cols=73  Identities=19%  Similarity=0.392  Sum_probs=50.9

Q ss_pred             Cccchhhhh--c-ccccHHHhhCCC------------CCCcHHHHHHHhhccCCCCCccceeeeccCCCCCccccc--CC
Q 029795           29 NKECSEYLQ--K-TMACLDFARGKI------------TTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKN--LG   91 (187)
Q Consensus        29 ~~~C~~~l~--~-L~pCl~yvtg~~------------~~Ps~~CC~alk~v~~~~~~CLC~~i~~~~~~~~~~~~~--~~   91 (187)
                      ...|...+.  + |.+|..||....            ...-..||+.|+.+   ++.|.|..|+....+.   ..+  ..
T Consensus         8 ~q~C~qq~q~~q~L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~---~~~CrC~al~~~~Q~q---~~g~q~~   81 (103)
T 1s6d_A            8 ESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEP---MWIRMRD   81 (103)
T ss_dssp             SSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS---CGGGSSHHHHHHTTST---TCSSTHH
T ss_pred             CcccHHHHHhChhHHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhc---CcccCcHHHHHHHHHH---hcchhHH
Confidence            367988763  4 899999996421            12458999999998   4899999997654221   111  11


Q ss_pred             CChHHHhhccccCCCC
Q 029795           92 VQVPKLLQLPSACQLK  107 (187)
Q Consensus        92 In~~rA~~LP~~Cgv~  107 (187)
                      -...+|..||..||+.
T Consensus        82 ~~~q~A~~LP~~C~i~   97 (103)
T 1s6d_A           82 QVMSMAHNLPIECNLM   97 (103)
T ss_dssp             HHHHHHHHHHHHTTSS
T ss_pred             HHHHHHHhcHHhcCCC
Confidence            1346788999999996

>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B

Probab=93.78  E-value=0.014  Score=44.16  Aligned_cols=80  Identities=20%  Similarity=0.351  Sum_probs=50.1

Q ss_pred             hcccccHHHhhCC-----CCCC----cHHHHHHHhhccCCCCCccceeeeccCCCCCc---ccc--cCCC--------Ch
Q 029795           37 QKTMACLDFARGK-----ITTP----SKECCSAVKGIKDDDPKCLCYIIKEANGGEGD---MVK--NLGV--------QV   94 (187)
Q Consensus        37 ~~L~pCl~yvtg~-----~~~P----s~~CC~alk~v~~~~~~CLC~~i~~~~~~~~~---~~~--~~~I--------n~   94 (187)
                      ..|..|.+|+...     ...|    -.+||..|+++   ++.|.|..|.....+...   ...  .++.        -.
T Consensus        15 ~~L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~g~~~g~~~~~~pgC~re~~~   91 (122)
T 1b1u_A           15 NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQR   91 (122)
T ss_dssp             STTTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHS---CHHHHHHHHHHHHTCEECTTSCEECCCCCCCTTCCHHHHH
T ss_pred             ccchHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhC---CccccHHHHHHHHHhhhhhhcccccccchhccCCcHHHHH
Confidence            4588999999532     1223    46799999998   488999988765432100   000  0111        11


Q ss_pred             HHHhhc--cccCCCCCCCCC-CCCCCCC
Q 029795           95 PKLLQL--PSACQLKNASTS-LCPKLLG  119 (187)
Q Consensus        95 ~rA~~L--P~~Cgv~~p~~s-~C~~~l~  119 (187)
                      ..|..|  |..||+..++.+ .|.-.|+
T Consensus        92 ~~A~~Lv~P~~Cnl~~~~g~~~C~~~l~  119 (122)
T 1b1u_A           92 AFAPKLVTEVECNLATIHGGPFCLSLLG  119 (122)
T ss_dssp             HHGGGTTSTTTTCCCCTTSSSCCSSSCC
T ss_pred             HHHHhcCCcccCCCCCCCCCcccccccC
Confidence            357889  999999877433 6764333

>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}

Probab=92.60  E-value=0.038  Score=40.61  Aligned_cols=79  Identities=24%  Similarity=0.547  Sum_probs=49.7

Q ss_pred             cchhhhhc---ccccHHHhhCC----C--CCC---------cHHHHHHHhhccCCCCCccceeeeccCCCCCcccccCC-
Q 029795           31 ECSEYLQK---TMACLDFARGK----I--TTP---------SKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLG-   91 (187)
Q Consensus        31 ~C~~~l~~---L~pCl~yvtg~----~--~~P---------s~~CC~alk~v~~~~~~CLC~~i~~~~~~~~~~~~~~~-   91 (187)
                      .|...+..   |.+|..|+...    .  ..|         -..||..|+.+   +..|.|..|+.....- ..-..++ 
T Consensus         4 ~C~~q~q~~q~L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v---~~qCrC~al~~~v~~~-~~qgq~~~   79 (109)
T 1sm7_A            4 KCQREFQQEQHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE---DQVCVCPTLKQAAKSV-RVQGQHGP   79 (109)
T ss_dssp             HHHTTHHHHCCCSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTT---CHHHHTTTTHHHHHTS-SCSSCCCT
T ss_pred             hhHHHHHcCccHHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhc---CccCCCHHHHHHHHHH-HHhcccch
Confidence            46665555   89999999621    1  111         47899999987   4889999887532110 0000011 


Q ss_pred             ----CChHHHhhccccCCCCCCCCCCCC
Q 029795           92 ----VQVPKLLQLPSACQLKNASTSLCP  115 (187)
Q Consensus        92 ----In~~rA~~LP~~Cgv~~p~~s~C~  115 (187)
                          -...+|..||..||+..+  ..|+
T Consensus        80 ~~~~~~~~~a~~LP~~Cnl~~~--~~C~  105 (109)
T 1sm7_A           80 FQSTRIYQIAKNLPNVCNMKQI--GTCP  105 (109)
T ss_dssp             THHHHHHHTTSSHHHHSCCCSS--CSSC
T ss_pred             HHHHHHHHHHHhCHHhcCCCCC--CCCC
Confidence                123558899999999633  4676

>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2

Probab=92.21  E-value=0.0078  Score=45.81  Aligned_cols=73  Identities=18%  Similarity=0.288  Sum_probs=45.0

Q ss_pred             hcccccHHHhhCC---CCCC---cHHHHHHHhhccCCCCCccceeeeccCCCCCccc---------ccC-----CCChHH
Q 029795           37 QKTMACLDFARGK---ITTP---SKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMV---------KNL-----GVQVPK   96 (187)
Q Consensus        37 ~~L~pCl~yvtg~---~~~P---s~~CC~alk~v~~~~~~CLC~~i~~~~~~~~~~~---------~~~-----~In~~r   96 (187)
                      +.|..|..||...   ...|   ..+||..|+++   +..|.|..|+...++.....         ..+     .+-...
T Consensus        15 ~pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCrre~~~~~   91 (124)
T 1hss_A           15 PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLT   91 (124)
T ss_dssp             SCCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTS---CTTTHHHHHHHHHHHHHHHC---------CCSTTCCHHHHHHH
T ss_pred             CcchHHHHHHHHHccCCCCcHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhhhhhhhccccchhhccCCcHHHHHHH
Confidence            4577899999522   1123   57899999998   48999998865432100000         000     011236


Q ss_pred             HhhccccCCCCCC-CCC
Q 029795           97 LLQLPSACQLKNA-STS  112 (187)
Q Consensus        97 A~~LP~~Cgv~~p-~~s  112 (187)
                      |..||..||+..+ +.+
T Consensus        92 A~~LP~~Cnl~~~~~g~  108 (124)
T 1hss_A           92 AASITAVCRLPIVVDAS  108 (124)
T ss_dssp             HTTHHHHTTCCEECSTT
T ss_pred             HHhchhhcCCCCCCCCC
Confidence            8889999999876 443

>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}

Probab=91.94  E-value=0.0082  Score=44.87  Aligned_cols=77  Identities=29%  Similarity=0.558  Sum_probs=50.4

Q ss_pred             ccchhhh---hcccccHHHhhC----C-C-CCC-------cHHHHHHHhhccCCCCCccceeeeccCCCCCcccccCC-C
Q 029795           30 KECSEYL---QKTMACLDFARG----K-I-TTP-------SKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLG-V   92 (187)
Q Consensus        30 ~~C~~~l---~~L~pCl~yvtg----~-~-~~P-------s~~CC~alk~v~~~~~~CLC~~i~~~~~~~~~~~~~~~-I   92 (187)
                      ..|...+   .+|..|..||..    . . ..+       -..||+.|+.+   ++.|.|..|+.....   .....+ +
T Consensus         6 q~C~~q~q~~~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv---~~~CrC~aL~~~v~~---~~qq~~~~   79 (114)
T 2lvf_A            6 EECREQMQRQQMLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGM---DESCRCEGLRMMMRM---MQQKEMQP   79 (114)
T ss_dssp             HHHHHHHHHCTHHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHS---CHHHHHHHHHHHHHH---HHHHHCCC
T ss_pred             HhhHHHHHHhHhHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHC---CcCccCHHHHHHHHH---HHHHHhhh
Confidence            5687554   358999999962    1 1 111       15699999998   589999988754321   011111 1


Q ss_pred             -------ChHHHhhccccCCCCCCCCCCCC
Q 029795           93 -------QVPKLLQLPSACQLKNASTSLCP  115 (187)
Q Consensus        93 -------n~~rA~~LP~~Cgv~~p~~s~C~  115 (187)
                             -..+|..||+.||+. |  ..|+
T Consensus        80 ~~~~~~~~~q~A~~LP~~C~i~-p--~~C~  106 (114)
T 2lvf_A           80 RGEQMRRMMRLAENIPSRCNLS-P--MRCP  106 (114)
T ss_dssp             CSHHHHHHHHHHHHHHHHHCCC-C--SCCT
T ss_pred             hhhHHHHHHHHHHhChHhcCCC-c--ccCC
Confidence                   136788999999997 4  4687

>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}

Probab=91.15  E-value=0.08  Score=40.22  Aligned_cols=84  Identities=15%  Similarity=0.505  Sum_probs=53.6

Q ss_pred             Cccchhhh--hcccccHHHhhCCC--C--------C-------CcHHHHHHHhhccCCCCCccceeeeccCCCCCccccc
Q 029795           29 NKECSEYL--QKTMACLDFARGKI--T--------T-------PSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKN   89 (187)
Q Consensus        29 ~~~C~~~l--~~L~pCl~yvtg~~--~--------~-------Ps~~CC~alk~v~~~~~~CLC~~i~~~~~~~~~~~~~   89 (187)
                      ...|...+  ..|.+|..||....  .        .       .-..||+.|+.+. +++.|.|..|+...-..-....+
T Consensus        13 ~qqC~qq~q~~qL~~Cq~yl~q~~~~~~~~~~~~~~~~~~~e~~lqqCC~qL~q~~-~~~qCrCeaL~q~~Q~qq~q~~g   91 (127)
T 1w2q_A           13 SSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCDRLQD   91 (127)
T ss_dssp             TCCHHHHHTTCCCHHHHHHHHTGGGSSSSSCSCCCTTSCCHHHHHHHHHHHHHHTS-CCCTTHHHHHHHHHHHSCTTTTT
T ss_pred             ccccHHHHHHhhHHHHHHHHHHHHhhccCCccchhhcccccHHHHHHHHHHHHhhc-cCCCccCHHHHHHHHHHHhhhhh
Confidence            36798765  46999999997421  0        0       1378999999973 45899999997653000000011


Q ss_pred             CCCC---hHHHhhccccCCCCCCCCCCCC
Q 029795           90 LGVQ---VPKLLQLPSACQLKNASTSLCP  115 (187)
Q Consensus        90 ~~In---~~rA~~LP~~Cgv~~p~~s~C~  115 (187)
                      --..   ..+|..||..||+.-+  ..|+
T Consensus        92 qq~~~~~~q~A~~LP~~C~i~~~--~~C~  118 (127)
T 1w2q_A           92 RQMVQQFKRELMSLPQQCNFRAP--QRCD  118 (127)
T ss_dssp             STTHHHHHHHHHHHHHHHTCCCS--SCCS
T ss_pred             HHHHHHHHHHHHHhHHhcCCCCC--CcCC
Confidence            1122   3568899999999523  4676

>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3

Probab=90.46  E-value=0.064  Score=40.61  Aligned_cols=71  Identities=21%  Similarity=0.523  Sum_probs=48.5

Q ss_pred             ccchhhh--hcccccHHHhhCCC----------CCC-----------cHHHHHHHhhccCCCCCccceeeeccCC-----
Q 029795           30 KECSEYL--QKTMACLDFARGKI----------TTP-----------SKECCSAVKGIKDDDPKCLCYIIKEANG-----   81 (187)
Q Consensus        30 ~~C~~~l--~~L~pCl~yvtg~~----------~~P-----------s~~CC~alk~v~~~~~~CLC~~i~~~~~-----   81 (187)
                      ..|...+  ..|.+|..||....          ..|           -..||+.|+.+   ++.|.|..|+....     
T Consensus        16 q~C~~e~qq~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~---~~~C~C~aL~~~v~~~~qQ   92 (125)
T 1psy_A           16 QQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQIQQ   92 (125)
T ss_dssp             SSHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTC---CSSHHHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHhhHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhc---CcccccHHHHHHHHHHHHH
Confidence            5698876  46999999997421          012           37999999987   58999999965430     


Q ss_pred             CCCcccccCCC--ChHHHhhccccCCC
Q 029795           82 GEGDMVKNLGV--QVPKLLQLPSACQL  106 (187)
Q Consensus        82 ~~~~~~~~~~I--n~~rA~~LP~~Cgv  106 (187)
                      +.   ..+--+  -..+|..||..||+
T Consensus        93 gq---~~gqq~~~~~q~A~~LP~~C~i  116 (125)
T 1psy_A           93 GQ---LHGEESERVAQRAGEIVSSCGV  116 (125)
T ss_dssp             TT---CCTTCSHHHHHHHHHHHHHHTC
T ss_pred             hh---hhHHHHHHHHHHHHhhHHHcCC
Confidence            10   000011  23668899999999

>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3

Probab=90.25  E-value=0.053  Score=37.43  Aligned_cols=58  Identities=24%  Similarity=0.524  Sum_probs=38.0

Q ss_pred             CCcHHHHHHHhhccCCCCCccceeeeccCCCCCcccccCC-----CChHHHhhccccCCCCCCCCCCCC
Q 029795           52 TPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLG-----VQVPKLLQLPSACQLKNASTSLCP  115 (187)
Q Consensus        52 ~Ps~~CC~alk~v~~~~~~CLC~~i~~~~~~~~~~~~~~~-----In~~rA~~LP~~Cgv~~p~~s~C~  115 (187)
                      ..-..||+.|+.+   ++.|.|..|+...+.- ..-..++     -...+|..||..||+..+  ..|+
T Consensus         9 ~~~qqCC~qL~~~---~~~CrC~aL~~~~~~~-~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~--~~C~   71 (75)
T 1pnb_B            9 WLREQCCNELYQE---DQVCVCPTLKQAAKSV-RVQGQHGPFQSTRIYQIAKNLPNVCNMKQI--GTCP   71 (75)
T ss_dssp             SCTHHHHHHHHTS---CGGGSHHHHHHHHHHH-HSGGGCSSCCHHHHHHHCCSCSCSSCCTTT--CCCC
T ss_pred             HHHHHHHHHHHhC---CcccccHHHHHHHHHH-HHHcccchHHHHHHHHHHHhhHHhcCCCCC--CCCC
Confidence            4568999999988   5899999987642100 0000011     124678899999999633  5776

>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}

Probab=89.32  E-value=0.033  Score=38.29  Aligned_cols=57  Identities=23%  Similarity=0.607  Sum_probs=36.7

Q ss_pred             cHHHHHHHhhccCCCCCccceeeeccCCCC---Cc-c-cccCCCChHHHhhccccCCCCCCCCCCCC
Q 029795           54 SKECCSAVKGIKDDDPKCLCYIIKEANGGE---GD-M-VKNLGVQVPKLLQLPSACQLKNASTSLCP  115 (187)
Q Consensus        54 s~~CC~alk~v~~~~~~CLC~~i~~~~~~~---~~-~-~~~~~In~~rA~~LP~~Cgv~~p~~s~C~  115 (187)
                      -..||+.|+.+   ++.|.|..|+......   +. . -....-...+|..||..||+..+  ..|+
T Consensus         7 ~qqCC~eL~~~---~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~~--~~C~   68 (72)
T 2ds2_B            7 LRQCCNQLRQV---DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNI--GACP   68 (72)
T ss_dssp             HHHHHHHHTTS---CGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTTC--CCCC
T ss_pred             HHHHHHHHHhc---CccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCCC--CcCC
Confidence            46899999987   5899999987643100   00 0 00011235778899999999632  4676

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	187
d1fk5a_	93	a.52.1.1 (A:) Plant non-specific lipid-transfer pr	3e-08
d1mida_	91	a.52.1.1 (A:) Plant non-specific lipid-transfer pr	3e-07

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]} Length = 93

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

 Score = 47.2 bits (112), Expect = 3e-08
 Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 11/81 (13%)

Query: 32  CSEYLQKTMACLDFARGKITTPSKECCSAVKGIKD-----DDPKCLCYIIKEANGGEGDM 86
           C +       C+ +ARG+ + PS  CCS V+ + +      D +  C  +K A  G    
Sbjct: 4   CGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAG---- 59

Query: 87  VKNLGVQVPKLLQLPSACQLK 107
               G+       +PS C + 
Sbjct: 60  --VSGLNAGNAASIPSKCGVS 78

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 91

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score = 44.4 bits (105), Expect = 3e-07
 Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 12/81 (14%)

Query: 32  CSEYLQKTMACLDFARGKITTPSKECCSAVKGIKD-----DDPKCLCYIIKEANGGEGDM 86
           C +   K   CL + +G    PS ECC+ V+ + +      D + +C  +K    G    
Sbjct: 3   CGQVDSKMKPCLTYVQGG-PGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARG---- 57

Query: 87  VKNLGVQVPKLLQLPSACQLK 107
                + +     +PS C + 
Sbjct: 58  --IHNLNLNNAASIPSKCNVN 76

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	187
d1fk5a_	93	Plant non-specific lipid-transfer protein (ns-LTP,	99.62
d1mida_	91	Plant non-specific lipid-transfer protein (ns-LTP,	99.58
d1tuka1	67	Non-specific lipid-transfer protein homologue (ns-	98.85
d1l6ha_	69	Non-specific lipid-transfer protein homologue (ns-	98.82
d1s6da_	103	Methionine-rich 2S protein (albumin 8) {Common sun	95.9
g1pnb.1	106	Napin BNIb {Rape (Brassica napus) [TaxId: 3708]}	95.35
d1psya_	125	2S albumin RicC3 {Castor bean (Ricinus communis) [	93.48
d1hypa_	75	Soybean hydrophobic protein {Soybean (Glycine max)	91.74
d1tmqb_	117	Trypsin/alpha-amylase inhibitor RBI {Eleusine cora	88.5
d1hssa_	120	0.19 alpha-amylase inhibitor {Wheat (Triticum aest	88.09
d1beaa_	116	Hageman factor/amylase inhibitor {Maize (Zea mays)	84.72

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

Probab=99.62  E-value=1.1e-17  Score=120.79  Aligned_cols=82  Identities=24%  Similarity=0.609  Sum_probs=68.6

Q ss_pred             ccchhhhhcccccHHHhhCCCCCCcHHHHHHHhhccCC-----CCCccceeeeccCCCCCcccccCCCChHHHhhccccC
Q 029795           30 KECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDD-----DPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSAC  104 (187)
Q Consensus        30 ~~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~alk~v~~~-----~~~CLC~~i~~~~~~~~~~~~~~~In~~rA~~LP~~C  104 (187)
                      .+|.+++..|.||++|++|++..|+..||++++++++.     +++|+|+.+++..+      ...+||.+|+.+||++|
T Consensus         2 i~C~~v~~~l~pCl~Yltg~~~~Ps~~CC~gv~~l~~~a~t~~dr~~lC~cl~~~~~------~~~~in~~ra~~LP~~C   75 (93)
T d1fk5a_           2 ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAA------GVSGLNAGNAASIPSKC   75 (93)
T ss_dssp             CCHHHHHHHHGGGHHHHTTCSSSCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHH------TCTTCCHHHHHHHHHHT
T ss_pred             CCHHHHHHHhhhhHHHHhCCCCCCCCchhHHHHHHHHHccCCccHHHHHHhhhhccc------ccCCcCHHHHHhhhHhc
Confidence            57999999999999999998888999999999998742     46788888876431      23589999999999999


Q ss_pred             CCCCC-C---CCCCCCC
Q 029795          105 QLKNA-S---TSLCPKL  117 (187)
Q Consensus       105 gv~~p-~---~s~C~~~  117 (187)
                      |++++ +   .++|+++
T Consensus        76 ~v~l~~pis~~~dCs~i   92 (93)
T d1fk5a_          76 GVSIPYTISTSTDCSRV   92 (93)
T ss_dssp             TCCCSSCCSTTCCGGGC
T ss_pred             CCCCCCCCCCCCCCCcC
Confidence            99886 3   3589875

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=99.58  E-value=6e-17  Score=116.47  Aligned_cols=80  Identities=23%  Similarity=0.584  Sum_probs=66.7

Q ss_pred             cchhhhhcccccHHHhhCCCCCCcHHHHHHHhhccCC-----CCCccceeeeccCCCCCcccccCCCChHHHhhccccCC
Q 029795           31 ECSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDD-----DPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQ  105 (187)
Q Consensus        31 ~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~alk~v~~~-----~~~CLC~~i~~~~~~~~~~~~~~~In~~rA~~LP~~Cg  105 (187)
                      +|.+++..|+||++|++++ .+|+..||++++++++.     ++.|+|+.+++..+      ...+||.+||.+||++||
T Consensus         2 ~C~~v~~~l~pCl~Yl~g~-~~P~~~CC~gv~~L~~~a~t~~d~~~lC~cl~~~~~------~~~~in~~ra~~LP~~C~   74 (91)
T d1mida_           2 NCGQVDSKMKPCLTYVQGG-PGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIAR------GIHNLNLNNAASIPSKCN   74 (91)
T ss_dssp             CHHHHHHHHGGGHHHHTTC-SCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHH------TCTTCCHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHhhHHHHcCC-CCCCcchhhhHHHHHHHhcCCCcHHHHHHhhhhhcc------cCCCcCHHHHHhchHhcC
Confidence            6999999999999999987 47999999999999753     45799998886431      235799999999999999


Q ss_pred             CCCC-CC---CCCCCC
Q 029795          106 LKNA-ST---SLCPKL  117 (187)
Q Consensus       106 v~~p-~~---s~C~~~  117 (187)
                      ++++ ++   ++|+++
T Consensus        75 v~~p~pis~~~dC~~i   90 (91)
T d1mida_          75 VNVPYTISPDIDCSRI   90 (91)
T ss_dssp             CCCCSCCCTTCCGGGC
T ss_pred             CCCCCCCCCCCCCCCC
Confidence            9987 44   489875

>d1tuka1 a.52.1.1 (A:1-67) Non-specific lipid-transfer protein homologue (ns-LTP2) {Triticum turgidum [TaxId: 4571]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Triticum turgidum [TaxId: 4571]

Probab=98.85  E-value=2.3e-10  Score=77.15  Aligned_cols=62  Identities=19%  Similarity=0.445  Sum_probs=53.0

Q ss_pred             hhcccccHHHhhCCCCCCcHHHHHHHhhccCCCCCccceeeeccCCCCCcccccCCCChHHHhhccccCCCCCC
Q 029795           36 LQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNA  109 (187)
Q Consensus        36 l~~L~pCl~yvtg~~~~Ps~~CC~alk~v~~~~~~CLC~~i~~~~~~~~~~~~~~~In~~rA~~LP~~Cgv~~p  109 (187)
                      ..+|.+|++.++++ ..||.+||+.||+.    ..|||+|+++.       .....||..+|..+-+.||++.|
T Consensus         4 p~~L~~C~~Ai~~g-~~PS~~CC~kLkeQ----~~ClC~Y~kdP-------~~~~yv~spnarkv~~aCgvp~P   65 (67)
T d1tuka1           4 ASQLAVCASAILSG-AKPSGECCGNLRAQ----QGCFCQYAKDP-------TYGQYIRSPHARDTLTSCGLAVP   65 (67)
T ss_dssp             GGGGGGGHHHHHHC-CCCCHHHHHHHHHH----GGGHHHHTTCT-------TTHHHHTSHHHHHHHHHTTCCCC
T ss_pred             hhhccccHHHHhcC-CCCcHHHHHHHHhc----CCccceecCCc-------cHHHHcCCHHHHHHHHhcCCCCC
Confidence            35799999999987 48999999999986    58999999853       23447999999999999999976

>d1l6ha_ a.52.1.1 (A:) Non-specific lipid-transfer protein homologue (ns-LTP2) {Rice (Oryza sativa) [TaxId: 4530]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=98.82  E-value=2.4e-10  Score=77.47  Aligned_cols=64  Identities=22%  Similarity=0.510  Sum_probs=54.3

Q ss_pred             chhhhhcccccHHHhhCCCCCCcHHHHHHHhhccCCCCCccceeeeccCCCCCcccccCCCChHHHhhccccCCCCCC
Q 029795           32 CSEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNA  109 (187)
Q Consensus        32 C~~~l~~L~pCl~yvtg~~~~Ps~~CC~alk~v~~~~~~CLC~~i~~~~~~~~~~~~~~~In~~rA~~LP~~Cgv~~p  109 (187)
                      |+  ..+|.+|++.++++. .||.+||+.||+.    ..|||+|+++.       .....||..+|..+-+.||++.|
T Consensus         3 C~--p~~L~~C~~ai~~g~-~PS~~CC~kLkeQ----~~ClC~Y~k~P-------~~~~yv~spnarkv~~aCgvp~P   66 (69)
T d1l6ha_           3 CN--AGQLTVCTGAIAGGA-RPTAACCSSLRAQ----QGCFCQFAKDP-------RYGRYVNSPNARKAVSSCGIALP   66 (69)
T ss_dssp             ST--TTTHHHHHHHHTTCC-STTHHHHHHHHHH----HHHHHHHTTCS-------SHHHHTTTTTGGGCCCCCSSCSC
T ss_pred             CC--hhhccccHHHHhCCC-CCcHHHHHHHHhc----CCccceeccCc-------cHHHHcCCHHHHHHHHhcCCCCC
Confidence            65  357999999999874 7999999999985    58999999853       24457999999999999999977

>d1s6da_ a.52.1.3 (A:) Methionine-rich 2S protein (albumin 8) {Common sunflower (Helianthus annuus) [TaxId: 4232]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Seed storage protein, 2S albumin
domain: Methionine-rich 2S protein (albumin 8)
species: Common sunflower (Helianthus annuus) [TaxId: 4232]

Probab=95.90  E-value=0.0023  Score=45.53  Aligned_cols=74  Identities=20%  Similarity=0.346  Sum_probs=52.0

Q ss_pred             CCccchhhh---hcccccHHHhhCC-----C-------CCCcHHHHHHHhhccCCCCCccceeeeccCCCCCcccccCCC
Q 029795           28 TNKECSEYL---QKTMACLDFARGK-----I-------TTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLGV   92 (187)
Q Consensus        28 a~~~C~~~l---~~L~pCl~yvtg~-----~-------~~Ps~~CC~alk~v~~~~~~CLC~~i~~~~~~~~~~~~~~~I   92 (187)
                      ....|...+   ..|..|..||...     .       ..--..||+.|+++   ++.|.|..|+.+..+.   ...-.+
T Consensus         7 ~~q~C~~q~q~qq~L~~Cq~Yl~q~~~~~~~~~~~~~~e~~~~~CC~qL~q~---~~~CrC~~L~~avq~q---~~q~~~   80 (103)
T d1s6da_           7 TESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEP---MWIRMR   80 (103)
T ss_dssp             CSSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS---CGGGSSHHHHHHTTST---TCSSTH
T ss_pred             ccccCHHHHHHhHhHHHHHHHHHHHHhccCCCCCccCchHHHHHHHHHHHcC---CCCCcCHHHHHHHHHH---HhHHHH
Confidence            347798655   4699999999631     1       12338899999998   5899999998765443   111111


Q ss_pred             --ChHHHhhccccCCCC
Q 029795           93 --QVPKLLQLPSACQLK  107 (187)
Q Consensus        93 --n~~rA~~LP~~Cgv~  107 (187)
                        -...|..||+.||+.
T Consensus        81 ~~~~q~Ak~LPs~C~i~   97 (103)
T d1s6da_          81 DQVMSMAHNLPIECNLM   97 (103)
T ss_dssp             HHHHHHHHHHHHHTTSS
T ss_pred             HHHHHHHHhChHhcCCC
Confidence              236788999999997

>d1psya_ a.52.1.3 (A:) 2S albumin RicC3 {Castor bean (Ricinus communis) [TaxId: 3988]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Seed storage protein, 2S albumin
domain: 2S albumin RicC3
species: Castor bean (Ricinus communis) [TaxId: 3988]

Probab=93.48  E-value=0.0081  Score=43.86  Aligned_cols=73  Identities=19%  Similarity=0.524  Sum_probs=49.0

Q ss_pred             Cccchhhh--hcccccHHHhhCCCC-----C-----C-----------cHHHHHHHhhccCCCCCccceeeeccCCCCCc
Q 029795           29 NKECSEYL--QKTMACLDFARGKIT-----T-----P-----------SKECCSAVKGIKDDDPKCLCYIIKEANGGEGD   85 (187)
Q Consensus        29 ~~~C~~~l--~~L~pCl~yvtg~~~-----~-----P-----------s~~CC~alk~v~~~~~~CLC~~i~~~~~~~~~   85 (187)
                      ...|...+  .+|..|..||.....     .     +           -..||+.|+.+   ++.|.|..|+.....   
T Consensus        15 ~q~Crqe~q~q~L~sCq~Yl~qq~~~~~~~~~~~~~~~~~~~~~e~~~l~qCC~qL~q~---~~~CrC~~l~~~v~~---   88 (125)
T d1psya_          15 SQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAED---   88 (125)
T ss_dssp             SSSHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTC---CSSHHHHHHHHHHHH---
T ss_pred             cccCHHHHHhhhHHHHHHHHHHHHhccCCCCcccccccccccccccHHHHHHHHHHHhC---CcCCcCHHHHHHHHH---
Confidence            46788753  479999999974310     0     1           04799999988   589999988754321   


Q ss_pred             ccccCCC---C----hHHHhhccccCCCC
Q 029795           86 MVKNLGV---Q----VPKLLQLPSACQLK  107 (187)
Q Consensus        86 ~~~~~~I---n----~~rA~~LP~~Cgv~  107 (187)
                      ......+   .    ..+|..||..||+.
T Consensus        89 ~~qq~~~~~~~~~~~~q~Ak~LPs~C~i~  117 (125)
T d1psya_          89 QIQQGQLHGEESERVAQRAGEIVSSCGVR  117 (125)
T ss_dssp             HHHHTTCCTTCSHHHHHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHhChhhcCCc
Confidence            0001111   1    47799999999997

>d1hypa_ a.52.1.1 (A:) Soybean hydrophobic protein {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Soybean hydrophobic protein
species: Soybean (Glycine max) [TaxId: 3847]

Probab=91.74  E-value=0.019  Score=38.36  Aligned_cols=68  Identities=24%  Similarity=0.625  Sum_probs=47.7

Q ss_pred             cccccHHHhhCCCCCCcHHHHHHHhhccCCC-CCccceeeeccCCCCCcccccCCCChHHHhh-ccccCCCCCCCCCCCC
Q 029795           38 KTMACLDFARGKITTPSKECCSAVKGIKDDD-PKCLCYIIKEANGGEGDMVKNLGVQVPKLLQ-LPSACQLKNASTSLCP  115 (187)
Q Consensus        38 ~L~pCl~yvtg~~~~Ps~~CC~alk~v~~~~-~~CLC~~i~~~~~~~~~~~~~~~In~~rA~~-LP~~Cgv~~p~~s~C~  115 (187)
                      +|--|.+-+.+. ..+..+||.-++.+.+-+ ..|||..+|-         ..+ +|....+. |-..||-..|+..+|+
T Consensus         5 Klg~C~nvLg~~-~~~~~~CC~Ll~GL~dleAAvCLCtaika---------~~l-lnvpv~l~llln~Cgk~~P~gF~CP   73 (75)
T d1hypa_           5 DLSICLNILGGS-LGTVDDCCALIGGLGDIEAIVCLCIQLRA---------LGI-LNLNRNLQLILNSCGRSYPSNATCP   73 (75)
T ss_dssp             CCGGGGGGGGTC-CTTHHHHHHHHHTSCHHHHHHHHHHHHHH---------HTC-SCHHHHHHHHHHHTTCSSCCCCCCS
T ss_pred             chhhHHHHhcCc-cCCCCCcchHHhhHHHHHHHHHHHHHHHH---------hhh-ccccchHHHHHHHcCCcCcCCCcCC
Confidence            456677777654 356789999999997654 3699998873         122 44444443 5568999988888998


Q ss_pred             C
Q 029795          116 K  116 (187)
Q Consensus       116 ~  116 (187)
                      +
T Consensus        74 ~   74 (75)
T d1hypa_          74 R   74 (75)
T ss_dssp             C
T ss_pred             C
Confidence            5

>d1tmqb_ a.52.1.2 (B:) Trypsin/alpha-amylase inhibitor RBI {Eleusine coracana, seeds [TaxId: 4511]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Proteinase/alpha-amylase inhibitors
domain: Trypsin/alpha-amylase inhibitor RBI
species: Eleusine coracana, seeds [TaxId: 4511]

Probab=88.50  E-value=0.076  Score=38.12  Aligned_cols=41  Identities=15%  Similarity=0.332  Sum_probs=28.8

Q ss_pred             hcccccHHHhhC----CC-C----CCcHHHHHHHhhccCCCCCccceeeeccC
Q 029795           37 QKTMACLDFARG----KI-T----TPSKECCSAVKGIKDDDPKCLCYIIKEAN   80 (187)
Q Consensus        37 ~~L~pCl~yvtg----~~-~----~Ps~~CC~alk~v~~~~~~CLC~~i~~~~   80 (187)
                      +-|-.|.+||..    .+ .    .+..+||+.|.++   +..|.|..|....
T Consensus        15 ~pL~~CR~Yv~~q~~g~g~~~~~~~~~~~CC~qL~~i---~~~CRC~ALr~~~   64 (117)
T d1tmqb_          15 NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILM   64 (117)
T ss_dssp             STTTTHHHHHHHHHHSCSCSSCHHHHHHHHHHHHHTS---CHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHhC---CcccchHHHHHHH
Confidence            347889999952    11 1    2335699999998   4789999876543

>d1hssa_ a.52.1.2 (A:) 0.19 alpha-amylase inhibitor {Wheat (Triticum aestivum) [TaxId: 4565]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Proteinase/alpha-amylase inhibitors
domain: 0.19 alpha-amylase inhibitor
species: Wheat (Triticum aestivum) [TaxId: 4565]

Probab=88.09  E-value=0.025  Score=40.97  Aligned_cols=71  Identities=17%  Similarity=0.286  Sum_probs=44.1

Q ss_pred             hcccccHHHhhCC--CC----CCcHHHHHHHhhccCCCCCccceeeeccCCC------C--C-cccccC-C----CChHH
Q 029795           37 QKTMACLDFARGK--IT----TPSKECCSAVKGIKDDDPKCLCYIIKEANGG------E--G-DMVKNL-G----VQVPK   96 (187)
Q Consensus        37 ~~L~pCl~yvtg~--~~----~Ps~~CC~alk~v~~~~~~CLC~~i~~~~~~------~--~-~~~~~~-~----In~~r   96 (187)
                      +-|-.|..|+...  +.    .+..+||..|.++   +..|.|..+....++      .  + +....+ +    .....
T Consensus        11 ~pL~~CR~yv~~q~~G~~~~~~~k~~CC~eLa~i---~~~CRCeALr~~~~~~~~e~G~~~g~~~~e~~PgC~re~~~~~   87 (120)
T d1hssa_          11 PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLT   87 (120)
T ss_dssp             SCCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTS---CTTTHHHHHHHHHHHHHHHCCC---------STTCCHHHHHHH
T ss_pred             CccHHHHHHHHHHhcCCCCcchHHHHHHHHHHhc---CcccchHHHHHHHhhhccccCCCCCccccccCCCCChHHHHHH
Confidence            4577899999632  11    2348999999998   368999887543221      0  0 001111 1    22366


Q ss_pred             HhhccccCCCCCCC
Q 029795           97 LLQLPSACQLKNAS  110 (187)
Q Consensus        97 A~~LP~~Cgv~~p~  110 (187)
                      |..||..||+++++
T Consensus        88 aa~Lpa~CNl~tv~  101 (120)
T d1hssa_          88 AASITAVCRLPIVV  101 (120)
T ss_dssp             HTTHHHHTTCCEEC
T ss_pred             HhhcccccCCCccC
Confidence            77899999999763

>d1beaa_ a.52.1.2 (A:) Hageman factor/amylase inhibitor {Maize (Zea mays) [TaxId: 4577]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Proteinase/alpha-amylase inhibitors
domain: Hageman factor/amylase inhibitor
species: Maize (Zea mays) [TaxId: 4577]

Probab=84.72  E-value=0.34  Score=34.50  Aligned_cols=80  Identities=25%  Similarity=0.466  Sum_probs=44.9

Q ss_pred             hcccccHHHhhC----CC-CCCc----HHHHHHHhhccCCCCCccceeeeccCCCC----C-----cccccC-C----CC
Q 029795           37 QKTMACLDFARG----KI-TTPS----KECCSAVKGIKDDDPKCLCYIIKEANGGE----G-----DMVKNL-G----VQ   93 (187)
Q Consensus        37 ~~L~pCl~yvtg----~~-~~Ps----~~CC~alk~v~~~~~~CLC~~i~~~~~~~----~-----~~~~~~-~----In   93 (187)
                      +-|-.|..|+..    .+ ..|.    .+||+.|.++.   .-|.|..+....++-    +     .....+ +    ..
T Consensus        11 ~pLp~CR~yV~~q~cg~g~~~~~~~~k~~CCreLa~I~---~~CRC~AL~~mm~~~~~~~g~~~~~~~~~~~PgC~re~~   87 (116)
T d1beaa_          11 NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIP---AYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQ   87 (116)
T ss_dssp             SCCHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHTSC---GGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTBCHHHH
T ss_pred             CCchhHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhccC---cccchHHHHHHHcccccccccccccCccccCCCCCHHHH
Confidence            456679999952    11 2233    56999999983   579995433211110    0     000001 1    22


Q ss_pred             hHHHhhc--cccCCCCCCCC-CCCCCCCC
Q 029795           94 VPKLLQL--PSACQLKNAST-SLCPKLLG  119 (187)
Q Consensus        94 ~~rA~~L--P~~Cgv~~p~~-s~C~~~l~  119 (187)
                      ...|..|  |..||+++.+. .-|.-++|
T Consensus        88 ~~~Aa~Lv~p~~CNL~tvhG~~~cp~~~g  116 (116)
T d1beaa_          88 RGFAATLVTEAECNLATISGVAECPWILG  116 (116)
T ss_dssp             HHHHTTTTSTTTTCCCCTTSSSCCTTTCC
T ss_pred             HHHHHHcCCccccCCcccCCCCCCCccCC
Confidence            3455667  99999997643 36776543