Citrus Sinensis ID: 029965

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180----
Protein Sequence
MIPQQYCGIREPSPDTMDADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKGGL
Secondary Structure (PSIPRED)
cccEEEccccccccccccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHccHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccHcHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccEccHHHEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHccccHHHccccccc
Coil and Loop (DISEMBL)
mipqqycgirepspdtmdadekFKVNWKRVAVTssfgfgfvgpvghfWYEGLDRFIRLklqlppksarFVATKVAmdsiifgplDLFVFFTYmgfstgknVAQVKEDLKrdflpalvleggiwpivqvanfryvpVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKGGL
Flexible Loop (DISEMBL)
mipqqycgirepspdtmdADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHsleerggkggl
Low Complexity Region (SEG)
MIPQQYCGIREPSPDTMDADEKFKVNWKRvavtssfgfgfvgpvghfWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKGGL
Disordered region (IsUnstruct)
*********************KFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFH***********
Disordered Region (DISOPRED)
MIPQQ*******************VNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSW****************************
Disordered Region (DISEMBL)
MIPQQYCGIREPSPDTMDADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLE********
Disordered Region (DISPRO)
******C**REPSPDTMDADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHS**********
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIPQQYCGIREPSPDTMDADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKGGL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	184	2.2.26 [Sep-21-2011]
Q54FR4	185	PXMP2/4 family protein 4	yes	no	0.717	0.713	0.307	3e-15
Q54XX9	193	PXMP2/4 family protein 2	no	no	0.755	0.720	0.289	2e-14
Q66GV0	177	Protein Mpv17 OS=Xenopus	N/A	no	0.663	0.689	0.361	1e-13
Q5TZ51	177	Protein Mpv17 OS=Danio re	yes	no	0.679	0.706	0.351	3e-13
P19258	176	Protein Mpv17 OS=Mus musc	yes	no	0.684	0.715	0.340	4e-13
Q5BK62	176	Protein Mpv17 OS=Rattus n	yes	no	0.684	0.715	0.340	6e-13
Q4IPX8	175	Protein SYM1 OS=Gibberell	yes	no	0.625	0.657	0.365	7e-13
Q2KIY1	196	Peroxisomal membrane prot	yes	no	0.619	0.581	0.325	8e-13
Q2KIN6	176	Protein Mpv17 OS=Bos taur	no	no	0.663	0.693	0.351	1e-12
P39210	176	Protein Mpv17 OS=Homo sap	yes	no	0.663	0.693	0.351	1e-12

>sp|Q54FR4|PX24D_DICDI PXMP2/4 family protein 4 OS=Dictyostelium discoideum GN=DDB_G0290631 PE=3 SV=1

 Score = 81.3 bits (199), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 77/140 (55%), Gaps = 8/140 (5%)

Query: 16  TMDADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVA 75
           + D D+K+  ++KR    + FGF   GP+ H+W++ LD+        P KS R    K+ 
Sbjct: 48  SRDKDKKY--DFKRSMRMAVFGFAVTGPLFHYWFKYLDK------HFPKKSYRHAFIKLT 99

Query: 76  MDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVP 135
           +D ++  P+  F+FF+ MG   GK+   + E LK+D+L   V +  +WP +   NF Y+ 
Sbjct: 100 IDQVVCSPVFNFLFFSGMGILEGKSKDDIVEKLKKDWLTTYVSDCVVWPFINFVNFAYIS 159

Query: 136 VRYQLLYVNIFCLLDSAFLS 155
             +++ ++N+  +   AFL+
Sbjct: 160 SIHRVTFMNVCNIGWGAFLA 179

Dictyostelium discoideum (taxid: 44689)

>sp|Q54XX9|PX24B_DICDI PXMP2/4 family protein 2 OS=Dictyostelium discoideum GN=DDB_G0278529 PE=3 SV=1

 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 72/145 (49%), Gaps = 6/145 (4%)

Query: 18  DADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMD 77
           D   +FK+++KRVA  S+ G  + GP+ H+WY  LD  ++       +    +  K+ +D
Sbjct: 44  DEKSQFKLDYKRVATMSTVGIFYSGPMLHYWYRSLDIMVK------GEGRSVIIKKMLID 97

Query: 78  SIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVR 137
            ++F P+ +  F T   F   K   +  E+  ++   A+ +   IWP  Q+ NF  VP  
Sbjct: 98  QLLFAPVAIGGFMTVTNFINNKGELKNLENFTKELFYAVKINWLIWPAAQIINFSLVPPN 157

Query: 138 YQLLYVNIFCLLDSAFLSWVEQQKD 162
            ++LY +I  +    FLS +   KD
Sbjct: 158 LRVLYSSIISIFWGMFLSHISFDKD 182

Dictyostelium discoideum (taxid: 44689)

>sp|Q66GV0|MPV17_XENLA Protein Mpv17 OS=Xenopus laevis GN=mpv17 PE=2 SV=2

 Score = 76.3 bits (186), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 68/130 (52%), Gaps = 8/130 (6%)

Query: 28  KRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVA-TKVAMDSIIFGPLDL 86
           +R       GF FVGPV   WY+ LDR I       P S + VA  K+ +D + F P  L
Sbjct: 50  ERTVKMMGIGFCFVGPVVGGWYKILDRII-------PGSGKPVALKKMLLDQVAFAPCFL 102

Query: 87  FVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIF 146
             F +      G +  Q+   LKRD+  AL+    IWP VQVANF ++P+ ++L  V   
Sbjct: 103 GCFLSIASALNGLSGEQIWGKLKRDYKDALITNYYIWPAVQVANFYFIPLYHRLAVVQFV 162

Query: 147 CLLDSAFLSW 156
            ++ +++LSW
Sbjct: 163 AIIWNSYLSW 172

Involved in mitochondria homeostasis.

Xenopus laevis (taxid: 8355)

>sp|Q5TZ51|MPV17_DANRE Protein Mpv17 OS=Danio rerio GN=mpv17 PE=2 SV=1

 Score = 74.7 bits (182), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 6/131 (4%)

Query: 26  NWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLD 85
           N +R A   S GF FVGPV   WY+ LD+ +        KSA     K+ +D + F P  
Sbjct: 48  NARRTAKMMSIGFFFVGPVVGGWYKVLDKLV----TGGTKSAAL--KKMLVDQVGFAPCF 101

Query: 86  LFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNI 145
           L  F    G   G  V +    L+RD+  AL+    +WP VQ+ANF ++P+ ++L  V I
Sbjct: 102 LGAFLGITGTLNGLTVEENVAKLQRDYTDALISNYYLWPPVQIANFYFIPLHHRLAVVQI 161

Query: 146 FCLLDSAFLSW 156
             ++ +++LSW
Sbjct: 162 VAVVWNSYLSW 172

Involved in mitochondria homeostasis.

Danio rerio (taxid: 7955)

>sp|P19258|MPV17_MOUSE Protein Mpv17 OS=Mus musculus GN=Mpv17 PE=2 SV=1

 Score = 74.3 bits (181), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 6/132 (4%)

Query: 29  RVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFV 88
           R     S G GFVGPV   WY+ LD  I      P  +      K+ +D   F P  L  
Sbjct: 50  RTLTMVSLGCGFVGPVVGGWYKVLDHLI------PGTTKVHALKKMLLDQGGFAPCFLGC 103

Query: 89  FFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCL 148
           F   +G   G +       LKRD+  AL+    +WP VQ+ANF  VP+ Y+L  V    +
Sbjct: 104 FLPLVGILNGMSAQDNWAKLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAI 163

Query: 149 LDSAFLSWVEQQ 160
           + +++LSW   Q
Sbjct: 164 VWNSYLSWKAHQ 175

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Mus musculus (taxid: 10090)

>sp|Q5BK62|MPV17_RAT Protein Mpv17 OS=Rattus norvegicus GN=Mpv17 PE=2 SV=1

 Score = 73.9 bits (180), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 6/132 (4%)

Query: 29  RVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFV 88
           R    +S G GFVGPV   WY  LD  I      P  +      K+ +D   F P  L  
Sbjct: 50  RTLTMASLGCGFVGPVVGGWYRVLDHLI------PGTTKVNALKKMLLDQGGFAPCFLGC 103

Query: 89  FFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCL 148
           F   +G   G +       LKRD+  AL+    +WP VQ+ANF  VP+ Y+L  V    +
Sbjct: 104 FLPLVGVLNGMSAQDNWAKLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAV 163

Query: 149 LDSAFLSWVEQQ 160
           + +++LSW   Q
Sbjct: 164 VWNSYLSWKAHQ 175

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Rattus norvegicus (taxid: 10116)

>sp|Q4IPX8|SYM1_GIBZE Protein SYM1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=SYM1 PE=3 SV=1

 Score = 73.6 bits (179), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 69/123 (56%), Gaps = 8/123 (6%)

Query: 39  GFV-GPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFST 97
           GFV GPV   W+  L R + ++     K A  +A +VA D + F P+ + VF + M    
Sbjct: 60  GFVFGPVATTWFAFLARRVNVR---NNKKAEVLA-RVACDQLGFAPVMIGVFLSSMATME 115

Query: 98  GKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWV 157
           GK+V   KE + + + PAL     +WP VQV NF  +P++Y+L + NI  +  +++LSWV
Sbjct: 116 GKSV---KERIDKTWWPALKANWMVWPAVQVINFSLIPLQYRLFFANIIAIGWNSYLSWV 172

Query: 158 EQQ 160
             Q
Sbjct: 173 NSQ 175

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (taxid: 229533)

>sp|Q2KIY1|PXMP2_BOVIN Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3

 Score = 73.2 bits (178), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 6/120 (5%)

Query: 36  FGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGF 95
           +GF F GP+GHF+Y  ++R+I      P +       ++ +D ++F P  L +FF  M F
Sbjct: 79  YGFFFTGPLGHFFYLLMERWI------PSEVPLAGIKRLLLDRLLFAPAFLSLFFLVMNF 132

Query: 96  STGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLS 155
             G++ A     +K  F PAL +   +W  VQ  N  Y+PV++++L+ N+  L   A+L+
Sbjct: 133 LEGQDTAAFAAKMKSGFWPALRMNWRVWTPVQFININYIPVQFRVLFANLVALFWYAYLA 192

Seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the peroxisomal membrane.

Bos taurus (taxid: 9913)

>sp|Q2KIN6|MPV17_BOVIN Protein Mpv17 OS=Bos taurus GN=MPV17 PE=2 SV=1

 Score = 73.2 bits (178), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 62/128 (48%), Gaps = 6/128 (4%)

Query: 29  RVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFV 88
           R    +S G GFVGPV   WY  LDR I      P  +      K+ +D   F P  L  
Sbjct: 50  RTLTMASLGCGFVGPVVGGWYRVLDRLI------PGTTKVDALKKMLLDQGGFAPCFLGC 103

Query: 89  FFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCL 148
           F   +G   G +       L+RDF  AL+    +WP VQ+ANF  VP+ Y+L  V    +
Sbjct: 104 FLPLVGTLNGLSAQDNWAKLQRDFPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAV 163

Query: 149 LDSAFLSW 156
           + +++LSW
Sbjct: 164 IWNSYLSW 171

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Bos taurus (taxid: 9913)

>sp|P39210|MPV17_HUMAN Protein Mpv17 OS=Homo sapiens GN=MPV17 PE=1 SV=1

 Score = 73.2 bits (178), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 63/128 (49%), Gaps = 6/128 (4%)

Query: 29  RVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFV 88
           R     S G GFVGPV   WY+ LDRFI      P  +      K+ +D   F P  L  
Sbjct: 50  RTLTMVSLGCGFVGPVVGGWYKVLDRFI------PGTTKVDALKKMLLDQGGFAPCFLGC 103

Query: 89  FFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCL 148
           F   +G   G +       L+RD+  AL+    +WP VQ+ANF  VP+ Y+L  V    +
Sbjct: 104 FLPLVGALNGLSAQDNWAKLQRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAV 163

Query: 149 LDSAFLSW 156
           + +++LSW
Sbjct: 164 IWNSYLSW 171

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	184
224143550	232	predicted protein [Populus trichocarpa]	0.891	0.706	0.823	6e-76
297835548	225	hypothetical protein ARALYDRAFT_479971 [	0.951	0.777	0.779	7e-76
110737868	235	hypothetical protein [Arabidopsis thalia	0.896	0.702	0.813	5e-75
15230132	235	Peroxisomal membrane 22 kDa (Mpv17/PMP22	0.896	0.702	0.807	1e-74
38454114	235	At3g24570 [Arabidopsis thaliana] gi|4134	0.896	0.702	0.807	1e-74
147812172	218	hypothetical protein VITISV_033965 [Viti	0.902	0.761	0.795	5e-74
225430031	218	PREDICTED: protein Mpv17 [Vitis vinifera	0.902	0.761	0.795	6e-74
225445224	217	PREDICTED: protein Mpv17 [Vitis vinifera	0.902	0.764	0.771	1e-71
356549797	215	PREDICTED: protein sym-1-like [Glycine m	0.891	0.762	0.756	4e-71
255546469	224	mpv17, putative [Ricinus communis] gi|22	0.896	0.736	0.739	7e-71

>gi|224143550|ref|XP_002324994.1| predicted protein [Populus trichocarpa] gi|222866428|gb|EEF03559.1| predicted protein [Populus trichocarpa]

 Score =  288 bits (737), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 135/164 (82%), Positives = 148/164 (90%)

Query: 18  DADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMD 77
           +   +FK+NWKRVA+TS FGFGFVGPVGHFWYEGLDRFIRL+  L PKS RFVATKVA D
Sbjct: 68  NEGAEFKINWKRVAITSMFGFGFVGPVGHFWYEGLDRFIRLRFLLQPKSPRFVATKVAAD 127

Query: 78  SIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVR 137
            IIFGP DLFVFFTYMGFSTGKNVAQVKED+KRDFLPAL+LEGG+WPI QV NFRYVPVR
Sbjct: 128 GIIFGPFDLFVFFTYMGFSTGKNVAQVKEDVKRDFLPALILEGGVWPIFQVVNFRYVPVR 187

Query: 138 YQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGK 181
           YQLLYVN+FCL+DSAFLSW+EQQKDA WKQWFTSF  L+ERGG+
Sbjct: 188 YQLLYVNVFCLIDSAFLSWIEQQKDAPWKQWFTSFQPLKERGGE 231

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297835548|ref|XP_002885656.1| hypothetical protein ARALYDRAFT_479971 [Arabidopsis lyrata subsp. lyrata] gi|297331496|gb|EFH61915.1| hypothetical protein ARALYDRAFT_479971 [Arabidopsis lyrata subsp. lyrata]

 Score =  288 bits (737), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 138/177 (77%), Positives = 157/177 (88%), Gaps = 2/177 (1%)

Query: 9   IREPSPDTMDADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSAR 68
           + E + D  DAD +FKVNWKRVA+TS FGFGFVGPVGHFWYEGLD+FI+LKL+  PKS R
Sbjct: 50  LTETNKDA-DADAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTR 108

Query: 69  FVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQV 128
           FVA KVAMD +IFGP+DL VFFTYMGF+TGKN A+VKE LKRDFLPAL LEGG WP++Q+
Sbjct: 109 FVAAKVAMDGLIFGPIDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQI 168

Query: 129 ANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFT-SFHSLEERGGKGGL 184
           ANFRYVPV+YQLLYVNIFCL+DSAFLSWVEQQKDAAWKQWFT SF  L+ERGG+GG+
Sbjct: 169 ANFRYVPVQYQLLYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKERGGQGGV 225

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110737868|dbj|BAF00872.1| hypothetical protein [Arabidopsis thaliana]

 Score =  285 bits (729), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 135/166 (81%), Positives = 151/166 (90%), Gaps = 1/166 (0%)

Query: 20  DEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSI 79
           D +FKVNWKRVA+TS FGFGFVGPVGHFWYEGLDRFI+LKL+  PKS RFVA KVAMD +
Sbjct: 70  DAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDRFIKLKLRYVPKSTRFVAAKVAMDGL 129

Query: 80  IFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQ 139
           IFGP+DL VFFTYMGF+TGKN A+VKE LKRDFLPAL LEGG WP++Q+ANFRYVPV+YQ
Sbjct: 130 IFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRYVPVQYQ 189

Query: 140 LLYVNIFCLLDSAFLSWVEQQKDAAWKQWFT-SFHSLEERGGKGGL 184
           LLYVNIFCL+DSAFLSWVEQQKDAAWKQWFT SF  L+ERGG+GG+
Sbjct: 190 LLYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKERGGQGGV 235

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15230132|ref|NP_189100.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis thaliana] gi|9294052|dbj|BAB02009.1| unnamed protein product [Arabidopsis thaliana] gi|332643403|gb|AEE76924.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis thaliana]

 Score =  284 bits (726), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 134/166 (80%), Positives = 151/166 (90%), Gaps = 1/166 (0%)

Query: 20  DEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSI 79
           D +FKVNWKRVA+TS FGFGFVGPVGHFWYEGLD+FI+LKL+  PKS RFVA KVAMD +
Sbjct: 70  DAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFVAAKVAMDGL 129

Query: 80  IFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQ 139
           IFGP+DL VFFTYMGF+TGKN A+VKE LKRDFLPAL LEGG WP++Q+ANFRYVPV+YQ
Sbjct: 130 IFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRYVPVQYQ 189

Query: 140 LLYVNIFCLLDSAFLSWVEQQKDAAWKQWFT-SFHSLEERGGKGGL 184
           LLYVNIFCL+DSAFLSWVEQQKDAAWKQWFT SF  L+ERGG+GG+
Sbjct: 190 LLYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKERGGQGGV 235

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|38454114|gb|AAR20751.1| At3g24570 [Arabidopsis thaliana] gi|41349920|gb|AAS00345.1| At3g24570 [Arabidopsis thaliana]

 Score =  284 bits (726), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 134/166 (80%), Positives = 151/166 (90%), Gaps = 1/166 (0%)

Query: 20  DEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSI 79
           D +FKVNWKRVA+TS FGFGFVGPVGHFWYEGLD+FI+LKL+  PKS RFVA KVAMD +
Sbjct: 70  DAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFVAAKVAMDGL 129

Query: 80  IFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQ 139
           IFGP+DL VFFTYMGF+TGKN A+VKE LKRDFLPAL LEGG WP++Q+ANFRYVPV+YQ
Sbjct: 130 IFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRYVPVQYQ 189

Query: 140 LLYVNIFCLLDSAFLSWVEQQKDAAWKQWFT-SFHSLEERGGKGGL 184
           LLYVNIFCL+DSAFLSWVEQQKDAAWKQWFT SF  L+ERGG+GG+
Sbjct: 190 LLYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKERGGQGGV 235

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147812172|emb|CAN61516.1| hypothetical protein VITISV_033965 [Vitis vinifera]

 Score =  282 bits (721), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 132/166 (79%), Positives = 150/166 (90%)

Query: 18  DADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMD 77
           D D++ K+NW+RVA TS FGFGFVGPVGHFWYEGLDR IR +LQL PKS RFVA KVA+D
Sbjct: 53  DEDKELKINWRRVATTSLFGFGFVGPVGHFWYEGLDRLIRHRLQLQPKSFRFVAAKVAID 112

Query: 78  SIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVR 137
            IIFGPLDL VFF+YMGFSTGK+VAQVKED+KRDFLPAL+LEGGIWPIVQV NFR++PVR
Sbjct: 113 GIIFGPLDLLVFFSYMGFSTGKSVAQVKEDVKRDFLPALILEGGIWPIVQVVNFRFIPVR 172

Query: 138 YQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKGG 183
           YQLLYVN FCLLDS+FLSWVEQQ+DA WKQWFTSF +L+E+ G+GG
Sbjct: 173 YQLLYVNFFCLLDSSFLSWVEQQQDAPWKQWFTSFLALKEKEGQGG 218

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430031|ref|XP_002284227.1| PREDICTED: protein Mpv17 [Vitis vinifera] gi|296081890|emb|CBI20895.3| unnamed protein product [Vitis vinifera]

 Score =  281 bits (720), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 132/166 (79%), Positives = 150/166 (90%)

Query: 18  DADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMD 77
           D D++ K+NW+RVA TS FGFGFVGPVGHFWYEGLDR IR +LQL PKS RFVA KVA+D
Sbjct: 53  DEDKELKINWRRVATTSLFGFGFVGPVGHFWYEGLDRLIRHRLQLQPKSFRFVAAKVAID 112

Query: 78  SIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVR 137
            IIFGPLDL VFF+YMGFSTGK+VAQVKED+KRDFLPAL+LEGGIWPIVQV NFR++PVR
Sbjct: 113 GIIFGPLDLLVFFSYMGFSTGKSVAQVKEDVKRDFLPALILEGGIWPIVQVVNFRFIPVR 172

Query: 138 YQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKGG 183
           YQLLYVN FCLLDS+FLSWVEQQ+DA WKQWFTSF +L+E+ G+GG
Sbjct: 173 YQLLYVNFFCLLDSSFLSWVEQQQDAPWKQWFTSFLALKEKEGQGG 218

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445224|ref|XP_002284391.1| PREDICTED: protein Mpv17 [Vitis vinifera] gi|297738820|emb|CBI28065.3| unnamed protein product [Vitis vinifera]

 Score =  274 bits (701), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 128/166 (77%), Positives = 146/166 (87%)

Query: 18  DADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMD 77
           DA + FK++WKR A+TS FGFGFVGPVGHFWYEGLDRFIRL+L L P S RFVA+KVAMD
Sbjct: 51  DAGQDFKIDWKRTAITSMFGFGFVGPVGHFWYEGLDRFIRLRLLLQPASVRFVASKVAMD 110

Query: 78  SIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVR 137
           S+IFGP +LFVFF++MGFSTGKN AQVKEDLKRDFLPAL++E G WP VQV NFRYVPVR
Sbjct: 111 SLIFGPFELFVFFSHMGFSTGKNAAQVKEDLKRDFLPALIVESGAWPFVQVVNFRYVPVR 170

Query: 138 YQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKGG 183
           YQLLYVN+FCLLDS FLSW+EQQKDA+WKQWF+S  S +E+G  GG
Sbjct: 171 YQLLYVNLFCLLDSIFLSWMEQQKDASWKQWFSSSPSSKEQGHGGG 216

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549797|ref|XP_003543277.1| PREDICTED: protein sym-1-like [Glycine max]

 Score =  272 bits (695), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 124/164 (75%), Positives = 142/164 (86%)

Query: 18  DADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMD 77
           D+D KF +NW R+ VTS FGFGFVGPVGHFWYEGLD+FIR KLQL PKS R VATKVAMD
Sbjct: 51  DSDAKFTINWNRLVVTSMFGFGFVGPVGHFWYEGLDKFIRFKLQLKPKSVRSVATKVAMD 110

Query: 78  SIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVR 137
            IIFGPL LFVFFTYMG   GKNVAQVK+DLKR+++PAL+LEGG+WP+VQV NF Y+PV+
Sbjct: 111 GIIFGPLHLFVFFTYMGLCAGKNVAQVKDDLKRNYVPALILEGGVWPVVQVFNFWYLPVK 170

Query: 138 YQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGK 181
           YQLLYVN+FCLLDS FLSW+EQQKD  WK+WF SFHS  E+GG+
Sbjct: 171 YQLLYVNLFCLLDSVFLSWLEQQKDTPWKKWFASFHSTNEKGGR 214

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546469|ref|XP_002514294.1| mpv17, putative [Ricinus communis] gi|223546750|gb|EEF48248.1| mpv17, putative [Ricinus communis]

 Score =  271 bits (694), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 122/165 (73%), Positives = 145/165 (87%)

Query: 18  DADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMD 77
           DA+ +FK+NWKRVA+T  FGFGF+GP+GH+WYEGLD+ +RL+ QLPPKS RFVA KVA D
Sbjct: 56  DAEAEFKINWKRVAITGLFGFGFIGPLGHYWYEGLDKIMRLRFQLPPKSLRFVAAKVAAD 115

Query: 78  SIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVR 137
           ++IF P DLFVFFTYMG ++GK+VAQVKED++RDFLPA+++EG IWPIVQVANFRYVPVR
Sbjct: 116 TLIFAPFDLFVFFTYMGLASGKSVAQVKEDVRRDFLPAMIMEGSIWPIVQVANFRYVPVR 175

Query: 138 YQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKG 182
           +QLLYVN FCLLDSAFLSW EQQ DA WKQWFTS   L+ER G+G
Sbjct: 176 HQLLYVNTFCLLDSAFLSWFEQQNDAPWKQWFTSVKPLKEREGQG 220

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	184
TAIR|locus:2091767	235	AT3G24570 "AT3G24570" [Arabido	0.896	0.702	0.710	1.8e-62
UNIPROTKB|G4N448	276	MGG_05062 "Uncharacterized pro	0.538	0.358	0.356	1.1e-11
DICTYBASE|DDB_G0290631	185	DDB_G0290631 "pmp22 family pro	0.706	0.702	0.268	1.3e-11
SGD|S000004241	197	SYM1 "Protein required for eth	0.586	0.548	0.302	1.3e-11
FB|FBgn0030481	245	CG1662 [Drosophila melanogaste	0.516	0.387	0.306	2.2e-11
POMBASE|SPAC4G9.14	221	SPAC4G9.14 "mitochondrial Mpv1	0.467	0.389	0.325	4.5e-11
ASPGD|ASPL0000057632	252	AN1247 [Emericella nidulans (t	0.548	0.400	0.343	4.6e-11
UNIPROTKB|F1PZH3	156	PXMP2 "Uncharacterized protein	0.565	0.666	0.292	5.8e-11
ZFIN|ZDB-GENE-040912-184	194	zgc:92599 "zgc:92599" [Danio r	0.554	0.525	0.294	2e-10
ZFIN|ZDB-GENE-040426-1168	177	mpv17 "MpV17 transgene, murine	0.559	0.581	0.321	2.5e-10

TAIR|locus:2091767 AT3G24570 "AT3G24570" [Arabidopsis thaliana (taxid:3702)]

 Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
 Identities = 118/166 (71%), Positives = 134/166 (80%)

Query:    20 DEKFKVNWKRXXXXXXXXXXXXXXXXXXWYEGLDRFIRLKLQLPPKSARFVATKVAMDSI 79
             D +FKVNWKR                  WYEGLD+FI+LKL+  PKS RFVA KVAMD +
Sbjct:    70 DAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFVAAKVAMDGL 129

Query:    80 IFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQ 139
             IFGP+DL VFFTYMGF+TGKN A+VKE LKRDFLPAL LEGG WP++Q+ANFRYVPV+YQ
Sbjct:   130 IFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRYVPVQYQ 189

Query:   140 LLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTS-FHSLEERGGKGGL 184
             LLYVNIFCL+DSAFLSWVEQQKDAAWKQWFTS F  L+ERGG+GG+
Sbjct:   190 LLYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKERGGQGGV 235

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005778 "peroxisomal membrane" evidence=ISS

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|G4N448 MGG_05062 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 161 (61.7 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 36/101 (35%), Positives = 56/101 (55%)

Query:    65 KSARF--VATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGI 122
             K+A F     +VAMD ++F P  +  FFT M  + G     V+  L+  ++P L     I
Sbjct:   160 KTAAFGPAMKRVAMDQLVFAPFGIAAFFTVMTIAEGGGRRAVQNKLRDMYVPTLKANFAI 219

Query:   123 WPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDA 163
             WP VQV NFR +PV++QL +V+   +  +A+LS     ++A
Sbjct:   220 WPAVQVINFRLMPVQFQLPFVSTIGIAWTAYLSLSNAAEEA 260

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

DICTYBASE|DDB_G0290631 DDB_G0290631 "pmp22 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 37/138 (26%), Positives = 67/138 (48%)

Query:    18 DADEKFKVNWKRXXXXXXXXXXXXXXXXXXWYEGLDRFIRLKLQLPPKSARFVATKVAMD 77
             D D+K+  ++KR                  W++ LD+        P KS R    K+ +D
Sbjct:    50 DKDKKY--DFKRSMRMAVFGFAVTGPLFHYWFKYLDK------HFPKKSYRHAFIKLTID 101

Query:    78 SIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVR 137
              ++  P+  F+FF+ MG   GK+   + E LK+D+L   V +  +WP +   NF Y+   
Sbjct:   102 QVVCSPVFNFLFFSGMGILEGKSKDDIVEKLKKDWLTTYVSDCVVWPFINFVNFAYISSI 161

Query:   138 YQLLYVNIFCLLDSAFLS 155
             +++ ++N+  +   AFL+
Sbjct:   162 HRVTFMNVCNIGWGAFLA 179

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

SGD|S000004241 SYM1 "Protein required for ethanol metabolism" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 33/109 (30%), Positives = 59/109 (54%)

Query:    48 WYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKED 107
             WY+ L+  I ++ + P      +  +VA+D + F PL L  +FT M    G++    K  
Sbjct:    70 WYKILNNKIYMRNR-PQYHWSNMVLRVAVDQLAFAPLGLPFYFTCMSIMEGRSFDVAKLK 128

Query:   108 LKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSW 156
             +K  + P L+    +WP+ Q  NF  VP++++LL VN+  +  + +LS+
Sbjct:   129 IKEQWWPTLLTNWAVWPLFQAINFSVVPLQHRLLAVNVVAIFWNTYLSY 177

GO:0005743 "mitochondrial inner membrane" evidence=IEA;IDA

GO:0016021 "integral to membrane" evidence=IEA;ISM

GO:0016020 "membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0006067 "ethanol metabolic process" evidence=IMP

GO:0003674 "molecular_function" evidence=ND

FB|FBgn0030481 CG1662 [Drosophila melanogaster (taxid:7227)]

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 31/101 (30%), Positives = 52/101 (51%)

Query:    48 WYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKED 107
             WY+ LD+      ++P ++ R VA K+ +D +I  P+ +  FF  +G    K   +V E+
Sbjct:   129 WYKMLDK------RMPGRTMRVVAKKIVLDQLICSPIYISAFFVTLGLLEQKTKHEVWEE 182

Query:   108 LKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCL 148
             +K         E  +WP+ Q  NF ++P  Y++ Y NI  L
Sbjct:   183 IKEKAWKLYAAEWTVWPVAQFVNFYWIPTHYRIFYDNIISL 223

GO:0005779 "integral to peroxisomal membrane" evidence=ISS

POMBASE|SPAC4G9.14 SPAC4G9.14 "mitochondrial Mpv17/PMP22 family protein 2 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 28/86 (32%), Positives = 51/86 (59%)

Query:    70 VATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVA 129
             +  +VA+D  IF PL +  FF +MG +  K+  ++K   ++ + P L     +WP VQ+ 
Sbjct:   126 IVLRVALDQFIFAPLGIVFFFLFMGITECKSYERLKSYFRKHYWPTLKANYILWPAVQLF 185

Query:   130 NFRYVPVRYQLLYVNIFCLLDSAFLS 155
             NF +VP+  Q+++ N   ++ +A+LS
Sbjct:   186 NFTFVPLVLQVIFANAVSMVWTAYLS 211

GO:0003674 "molecular_function" evidence=ND

GO:0005743 "mitochondrial inner membrane" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006067 "ethanol metabolic process" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0071276 "cellular response to cadmium ion" evidence=IMP

GO:0071585 "detoxification of cadmium ion" evidence=IMP

ASPGD|ASPL0000057632 AN1247 [Emericella nidulans (taxid:162425)]

 Score = 154 (59.3 bits), Expect = 4.6e-11, P = 4.6e-11
 Identities = 35/102 (34%), Positives = 54/102 (52%)

Query:    55 FIRLKLQLPPKSARFVATK-VAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFL 113
             F+     L  K+  F A K VA D ++F P  L  FF+YM  + G     +    +  +L
Sbjct:   143 FLSRTFPLAKKNPTFSALKRVACDQLLFAPFGLVCFFSYMTIAEGGGKRALTRKFQDVYL 202

Query:   114 PALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLS 155
             P L     +WP VQV NFR VP+++Q+ +V+   +  +A+LS
Sbjct:   203 PTLKANFVLWPAVQVLNFRVVPIQFQIPFVSSVGIAWTAYLS 244

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0000324 "fungal-type vacuole" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|F1PZH3 PXMP2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 31/106 (29%), Positives = 56/106 (52%)

Query:    52 LDRFIRLKLQ--LPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLK 109
             L+ F  L ++  +PP+       ++ +D ++F P  L +FF  M F  G+  A     ++
Sbjct:    47 LNHFFYLFMEHWIPPEVPLAGVKRLLLDRLLFAPAFLLLFFLIMNFLEGRETAAFAVQIR 106

Query:   110 RDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLS 155
             R F PAL +   +W  VQ  N  YVP+++++L+ N+  L    +L+
Sbjct:   107 RSFWPALCMNWRVWTPVQFININYVPLQFRVLFANLVSLFWYIYLA 152

GO:0043234 "protein complex" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-040912-184 zgc:92599 "zgc:92599" [Danio rerio (taxid:7955)]

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 30/102 (29%), Positives = 55/102 (53%)

Query:    58 LKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALV 117
             L++ LP      +  ++ ++ +IF P  L +F+  M    GK +A V+  LK  + PA+ 
Sbjct:    93 LEVLLPTTVPYCLIKRLLLERLIFAPAFLLLFYVVMNALEGKTLADVQNKLKTSYWPAMK 152

Query:   118 LEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQ 159
             +   +W   Q  N  YVPV++++L+ N+  L   A+L+ V +
Sbjct:   153 MNWKVWTPFQFININYVPVQFRVLFANMVALFWYAYLASVRK 194

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

ZFIN|ZDB-GENE-040426-1168 mpv17 "MpV17 transgene, murine homolog, glomerulosclerosis" [Danio rerio (taxid:7955)]

 Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
 Identities = 35/109 (32%), Positives = 57/109 (52%)

Query:    48 WYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKED 107
             WY+ LD+ +        KSA     K+ +D + F P  L  F    G   G  V +    
Sbjct:    70 WYKVLDKLVTGGT----KSAAL--KKMLVDQVGFAPCFLGAFLGITGTLNGLTVEENVAK 123

Query:   108 LKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSW 156
             L+RD+  AL+    +WP VQ+ANF ++P+ ++L  V I  ++ +++LSW
Sbjct:   124 LQRDYTDALISNYYLWPPVQIANFYFIPLHHRLAVVQIVAVVWNSYLSW 172

GO:0016021 "integral to membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.XVIII.2415.1 hypothetical protein (215 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	184
pfam04117	68	pfam04117, Mpv17_PMP22, Mpv17 / PMP22 family	1e-17

>gnl|CDD|202894 pfam04117, Mpv17_PMP22, Mpv17 / PMP22 family

 Score = 72.6 bits (179), Expect = 1e-17
 Identities = 27/68 (39%), Positives = 42/68 (61%)

Query: 93  MGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSA 152
           MG   GK++ ++KE LK  F P L     +WP VQ  NF +VPV Y++L+VN+  +  + 
Sbjct: 1   MGLLEGKSLEEIKEKLKEKFWPTLKANWKVWPPVQFINFAFVPVHYRVLFVNLVGIGWNT 60

Query: 153 FLSWVEQQ 160
           +LS+V  +
Sbjct: 61  YLSYVNNK 68

The 22-kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes. PMP22 seems to be involved in pore forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information. Mpv17 is a closely related peroxisomal protein. In mouse, the Mpv17 protein is involved in the development of early-onset glomerulosclerosis. More recently a homolog of Mpv17 in S. cerevisiae has been been found to be an integral membrane protein of the inner mitochondrial membrane where it has been proposed to have a role in ethanol metabolism and tolerance during heat-shock. Defects in MPV17 is associated with mitochondrial DNA depletion syndrome (MDDS) and Navajo neurohepatopathy (NNH). MDDS is a clinically heterogeneous group of disorders characterized by a reduction in mitochondrial DNA (mtDNA) copy number. Primary mtDNA depletion is inherited as an autosomal recessive trait and may affect single organs, typically muscle or liver, or multiple tissues. Individuals with the hepatocerebral form of mitochondrial DNA depletion syndrome have early progressive liver failure and neurologic abnormalities, hypoglycemia, and increased lactate in body fluids. NNH is an autosomal recessive disease that is prevalent among Navajo children in the South Western states of America. The major clinical features are hepatopathy, peripheral neuropathy, corneal anesthesia and scarring, acral mutilation, cerebral leukoencephalopathy, failure to thrive, and recurrent metabolic acidosis with intercurrent infections. Infantile, childhood, and classic forms of NNH have been described. Mitochondrial DNA depletion was detected in the livers of patients, suggesting a primary defect in mtDNA maintenance. Length = 68

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	184
KOG1944	222	consensus Peroxisomal membrane protein MPV17 and r	100.0
PF04117	68	Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR0	99.92

>KOG1944 consensus Peroxisomal membrane protein MPV17 and related proteins [General function prediction only]

Probab=100.00  E-value=5.2e-39  Score=264.94  Aligned_cols=142  Identities=36%  Similarity=0.656  Sum_probs=135.3

Q ss_pred             CcccccCC--CCcccHHHHHHHHHhcccchhhHHHHHHHHHHHHhhhhcCCCCCcHHHHHHHHHHhhhhhhhhHHHHHHH
Q 029965           14 PDTMDADE--KFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFT   91 (184)
Q Consensus        14 q~~~~~~~--~~~~D~~Rt~r~~~~G~~~~gP~~h~Wy~~Ldr~~~~~~~~~~~~~~~v~~Kv~~DQ~v~aP~~~~~F~~   91 (184)
                      |.+.++.+  .+++|+.|++||+++|+++.||.+|+||+.||+.+|      .++..++++|+++||++++|+++.+||.
T Consensus        71 q~~~~~~~~~~~~~d~~rtlr~~~~G~~f~gp~~~~Wy~~L~~~~p------~~~~~~~~~kvl~dql~~~P~~~~~ff~  144 (222)
T KOG1944|consen   71 QSLEGRSKKLFQTLDLTRTLRMGIFGFLFVGPTLHYWYRLLSKLFP------KKTLITVVKKVLLDQLVFAPLFIVVFFL  144 (222)
T ss_pred             hhhhhhcccccccccHHHHHHHHhhhhheeccchhHHHHHHHHHcc------CccHHHHHHHHHHhhhhhchHHHHHHHH
Confidence            55555554  689999999999999988999999999999999996      5788999999999999999999999999


Q ss_pred             HHHhcCCCCHHHHHHHHHhchHHHHHhhcccchHHhhhhheeecccchhhhhhHHHHHHHHHHHHhhccc
Q 029965           92 YMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQK  161 (184)
Q Consensus        92 ~~~~leG~~~~~~~~~lk~~~~~~l~~~~~vWp~~q~iNF~fVP~~~Rvl~~n~v~~~Wn~yLS~~~~~~  161 (184)
                      .++++||++.+++.++++++++|++++||++||++|++||.+||+++|++++|+++++||+|||+++++.
T Consensus       145 ~~~~legk~~~~~~~~~~~~~~p~l~~~~~~WP~~q~inF~~VP~~~rvl~~~~vsl~W~~~Ls~~~~~~  214 (222)
T KOG1944|consen  145 LMGLLEGKTNEEAKAKLKRKFWPTLKANWMVWPLVQFINFRLVPLQYRVLFVNIVSLVWNTYLSYKNASL  214 (222)
T ss_pred             HHHHHcCCCHHHHHHHHHHHHHHHHhhhheecchhheeeeEEccccceehhhhhHHHHHHHHHHHHhhcc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999997

>PF04117 Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR007248 The 22 kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes

Probab=99.92  E-value=4.9e-26  Score=155.19  Aligned_cols=68  Identities=40%  Similarity=0.820  Sum_probs=66.5

Q ss_pred             HHhcCCCCHHHHHHHHHhchHHHHHhhcccchHHhhhhheeecccchhhhhhHHHHHHHHHHHHhhcc
Q 029965           93 MGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQ  160 (184)
Q Consensus        93 ~~~leG~~~~~~~~~lk~~~~~~l~~~~~vWp~~q~iNF~fVP~~~Rvl~~n~v~~~Wn~yLS~~~~~  160 (184)
                      |+++||++++++++++|++++++++++|++|||+|++||.+||+++|++|+|+|+++||+|||+++|+
T Consensus         1 Mg~l~g~s~~~~~~~l~~~~~~~~~~~~~~Wp~~~~vnF~~vP~~~Rv~~~~~v~~~W~~~LS~~~~r   68 (68)
T PF04117_consen    1 MGLLEGKSWEEIKEKLKRDYWPTLKASWKFWPPAQIVNFRYVPPHYRVLFVNVVSFFWNTYLSYIANR   68 (68)
T ss_pred             CCcccCCCHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHhcccChhhhhhhhhhHHHHHHHHHHHHhcC
Confidence            57899999999999999999999999999999999999999999999999999999999999999986

PMP22 seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information []. Mpv17 is a closely related peroxisomal protein involved in the development of early-onset glomerulosclerosis []. A member of this family found in Saccharomyces cerevisiae (Baker's yeast) is an integral membrane protein of the inner mitochondrial membrane and has been suggested to play a role in mitochondrial function during heat shock [].; GO: 0016021 integral to membrane

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00