Citrus Sinensis ID: 030001

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180----
MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGLWASATRILLLSLVATPWEGATRRGLDLRDHGPATLSFLTIPTSRSS
ccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHccccccccccccccccccccccHHccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccc
cccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccEccccEcccccHHHcHHHHccHHHccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHcccccHHHHHHHccccccccccccccccccccccc
mtknyptvSEDYKKAVEKCKRKLRGfiaekncaPLMLRIAWHsagtydvktktggpfgTMRLAAEQAHSANNGLDIAVRLLepfkeqfptisyaDLYQLAGVVGvevtggpdipfhpgrddkaeppqegrlpdakqGLWASATRILLLSLVatpwegatrrgldlrdhgpatlsfltiptsrss
mtknyptvsedyKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGLWASATRILLLSLVATPWEGATrrgldlrdhgpatlsfltiptsrss
MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGLWASATRILLLSLVATPWEGATRRGLDLRDHGPATLSFLTIPTSRSS
**************AVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPD************************GLWASATRILLLSLVATPWEGATRRGLDLRDHGPATLSFL********
****YPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGLWASATRILLLSLVATPWEGATRRGLDLRDHGPATLSFL*I******
*********EDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGLWASATRILLLSLVATPWEGATRRGLDLRDHGPATLSFLTIPTSRSS
***NYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGLWASATRILLLSLVATPWEGATRRGLDLRDHGPATLSFLTIP*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGLWASATRILLLSLVATPWEGATRRGLDLRDHGPATLSFLTIPTSRSS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query184 2.2.26 [Sep-21-2011]
Q05431250 L-ascorbate peroxidase 1, yes no 0.744 0.548 0.781 5e-63
P48534250 L-ascorbate peroxidase, c N/A no 0.744 0.548 0.781 5e-61
Q1PER6251 L-ascorbate peroxidase 2, no no 0.75 0.549 0.739 1e-57
Q9FE01251 L-ascorbate peroxidase 2, yes no 0.739 0.541 0.742 2e-57
Q10N21250 L-ascorbate peroxidase 1, no no 0.744 0.548 0.722 2e-56
A2XFC7250 L-ascorbate peroxidase 1, N/A no 0.744 0.548 0.722 2e-56
Q0JEQ2 291 Probable L-ascorbate pero no no 0.717 0.453 0.606 2e-43
Q01MI9 291 Probable L-ascorbate pero N/A no 0.717 0.453 0.606 2e-43
Q42564 287 L-ascorbate peroxidase 3, no no 0.722 0.463 0.616 6e-43
Q6ZJJ1 291 Probable L-ascorbate pero no no 0.717 0.453 0.590 2e-41
>sp|Q05431|APX1_ARATH L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis thaliana GN=APX1 PE=1 SV=2 Back     alignment and function desciption
 Score =  240 bits (612), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 107/137 (78%), Positives = 125/137 (91%)

Query: 1   MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTM 60
           MTKNYPTVSEDYKKAVEKC+RKLRG IAEKNCAP+M+R+AWHSAGT+D +++TGGPFGTM
Sbjct: 1   MTKNYPTVSEDYKKAVEKCRRKLRGLIAEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTM 60

Query: 61  RLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRD 120
           R  AEQAH AN+G+ IA+RLL+P +EQFPTIS+AD +QLAGVV VEVTGGPDIPFHPGR+
Sbjct: 61  RFDAEQAHGANSGIHIALRLLDPIREQFPTISFADFHQLAGVVAVEVTGGPDIPFHPGRE 120

Query: 121 DKAEPPQEGRLPDAKQG 137
           DK +PP EGRLPDA +G
Sbjct: 121 DKPQPPPEGRLPDATKG 137
Plays a key role in hydrogen peroxide removal. Constitutes a central component of the reactive oxygen gene network.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 1EC: 1
>sp|P48534|APX1_PEA L-ascorbate peroxidase, cytosolic OS=Pisum sativum GN=APX1 PE=1 SV=2 Back     alignment and function description
>sp|Q1PER6|APX2_ARATH L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis thaliana GN=APX2 PE=2 SV=3 Back     alignment and function description
>sp|Q9FE01|APX2_ORYSJ L-ascorbate peroxidase 2, cytosolic OS=Oryza sativa subsp. japonica GN=APX2 PE=1 SV=1 Back     alignment and function description
>sp|Q10N21|APX1_ORYSJ L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. japonica GN=APX1 PE=1 SV=1 Back     alignment and function description
>sp|A2XFC7|APX1_ORYSI L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. indica GN=APX1 PE=2 SV=1 Back     alignment and function description
>sp|Q0JEQ2|APX3_ORYSJ Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=2 SV=1 Back     alignment and function description
>sp|Q01MI9|APX3_ORYSI Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1 Back     alignment and function description
>sp|Q42564|APX3_ARATH L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1 Back     alignment and function description
>sp|Q6ZJJ1|APX4_ORYSJ Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query184
221327589250 ascorbate peroxidase 2 [Citrus maxima] 0.744 0.548 1.0 6e-76
300837175250 ascorbate peroxidase [Citrus limon] 0.744 0.548 0.992 2e-75
6651272250 ascorbate peroxidase [Pimpinella brachyc 0.744 0.548 0.839 7e-64
37783265250 ascorbate peroxidase [Ipomoea batatas] 0.744 0.548 0.832 1e-63
27449248250 ascorbate peroxidase [Hevea brasiliensis 0.744 0.548 0.817 2e-62
116784033249 unknown [Picea sitchensis] gi|116786717| 0.744 0.550 0.824 3e-62
39939493249 ascorbate peroxidase [Pinus pinaster] 0.744 0.550 0.824 3e-62
2586151180 ripening-associated protein [Musa acumin 0.885 0.905 0.703 3e-62
62526587250 ascorbate peroxidase APX2 [Manihot escul 0.744 0.548 0.817 5e-62
192912966249 cytosolic ascorbate peroxidase [Elaeis g 0.744 0.550 0.795 5e-62
>gi|221327589|gb|ACM17464.1| ascorbate peroxidase 2 [Citrus maxima] Back     alignment and taxonomy information
 Score =  288 bits (738), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 137/137 (100%), Positives = 137/137 (100%)

Query: 1   MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTM 60
           MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTM
Sbjct: 1   MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTM 60

Query: 61  RLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRD 120
           RLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRD
Sbjct: 61  RLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRD 120

Query: 121 DKAEPPQEGRLPDAKQG 137
           DKAEPPQEGRLPDAKQG
Sbjct: 121 DKAEPPQEGRLPDAKQG 137

Source: Citrus maxima

Species: Citrus maxima

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|300837175|gb|ADK38619.1| ascorbate peroxidase [Citrus limon] Back     alignment and taxonomy information
>gi|6651272|gb|AAF22246.1| ascorbate peroxidase [Pimpinella brachycarpa] Back     alignment and taxonomy information
>gi|37783265|gb|AAP42501.1| ascorbate peroxidase [Ipomoea batatas] Back     alignment and taxonomy information
>gi|27449248|gb|AAO14118.1|AF457210_1 ascorbate peroxidase [Hevea brasiliensis] Back     alignment and taxonomy information
>gi|116784033|gb|ABK23188.1| unknown [Picea sitchensis] gi|116786717|gb|ABK24212.1| unknown [Picea sitchensis] gi|224286418|gb|ACN40916.1| unknown [Picea sitchensis] Back     alignment and taxonomy information
>gi|39939493|gb|AAR32786.1| ascorbate peroxidase [Pinus pinaster] Back     alignment and taxonomy information
>gi|2586151|gb|AAB82778.1| ripening-associated protein [Musa acuminata AAA Group] Back     alignment and taxonomy information
>gi|62526587|gb|AAX84679.1| ascorbate peroxidase APX2 [Manihot esculenta] gi|62526589|gb|AAX84680.1| ascorbate peroxidase APX3 [Manihot esculenta] Back     alignment and taxonomy information
>gi|192912966|gb|ACF06591.1| cytosolic ascorbate peroxidase [Elaeis guineensis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query184
TAIR|locus:2026616250 APX1 "ascorbate peroxidase 1" 0.744 0.548 0.781 9.3e-59
TAIR|locus:2074914251 APX2 "ascorbate peroxidase 2" 0.739 0.541 0.75 9.9e-55
TAIR|locus:2131586 287 APX3 "ascorbate peroxidase 3" 0.717 0.459 0.621 3.3e-40
TAIR|locus:2125409 279 APX5 "ascorbate peroxidase 5" 0.739 0.487 0.539 9.5e-34
ASPGD|ASPL0000044163361 ccp1 [Emericella nidulans (tax 0.722 0.368 0.449 5.2e-26
TAIR|locus:2204735 426 TAPX "thylakoidal ascorbate pe 0.625 0.269 0.450 3.8e-24
UNIPROTKB|A4R606 300 MGG_10368 "Putative heme-bindi 0.581 0.356 0.531 8.7e-24
ASPGD|ASPL0000029968 312 AN5440 [Emericella nidulans (t 0.576 0.339 0.508 4.8e-23
UNIPROTKB|A4QVH4362 CCP1 "Cytochrome c peroxidase, 0.701 0.356 0.437 6.1e-23
TAIR|locus:2137435372 SAPX "stromal ascorbate peroxi 0.646 0.319 0.412 7e-22
TAIR|locus:2026616 APX1 "ascorbate peroxidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
 Identities = 107/137 (78%), Positives = 125/137 (91%)

Query:     1 MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTM 60
             MTKNYPTVSEDYKKAVEKC+RKLRG IAEKNCAP+M+R+AWHSAGT+D +++TGGPFGTM
Sbjct:     1 MTKNYPTVSEDYKKAVEKCRRKLRGLIAEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTM 60

Query:    61 RLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRD 120
             R  AEQAH AN+G+ IA+RLL+P +EQFPTIS+AD +QLAGVV VEVTGGPDIPFHPGR+
Sbjct:    61 RFDAEQAHGANSGIHIALRLLDPIREQFPTISFADFHQLAGVVAVEVTGGPDIPFHPGRE 120

Query:   121 DKAEPPQEGRLPDAKQG 137
             DK +PP EGRLPDA +G
Sbjct:   121 DKPQPPPEGRLPDATKG 137
GO:0004601 "peroxidase activity" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0016688 "L-ascorbate peroxidase activity" evidence=ISS;IMP;TAS
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0000302 "response to reactive oxygen species" evidence=IMP
GO:0042744 "hydrogen peroxide catabolic process" evidence=IMP
GO:0009793 "embryo development ending in seed dormancy" evidence=IMP
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0005618 "cell wall" evidence=IDA
GO:0046686 "response to cadmium ion" evidence=IEP;RCA
GO:0005886 "plasma membrane" evidence=IDA
GO:0009651 "response to salt stress" evidence=IEP;RCA
GO:0009507 "chloroplast" evidence=IDA
GO:0005829 "cytosol" evidence=IDA;TAS
GO:0009506 "plasmodesma" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006094 "gluconeogenesis" evidence=RCA
GO:0006096 "glycolysis" evidence=RCA
GO:0006457 "protein folding" evidence=RCA
GO:0006499 "N-terminal protein myristoylation" evidence=RCA
GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=RCA
GO:0006598 "polyamine catabolic process" evidence=RCA
GO:0006833 "water transport" evidence=RCA
GO:0006972 "hyperosmotic response" evidence=RCA
GO:0007030 "Golgi organization" evidence=RCA
GO:0009266 "response to temperature stimulus" evidence=RCA
GO:0009408 "response to heat" evidence=IEP;RCA
GO:0009644 "response to high light intensity" evidence=RCA
GO:0009698 "phenylpropanoid metabolic process" evidence=RCA
GO:0009853 "photorespiration" evidence=RCA
GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA
GO:0042398 "cellular modified amino acid biosynthetic process" evidence=RCA
GO:0042542 "response to hydrogen peroxide" evidence=RCA
GO:0051788 "response to misfolded protein" evidence=RCA
GO:0080129 "proteasome core complex assembly" evidence=RCA
TAIR|locus:2074914 APX2 "ascorbate peroxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2131586 APX3 "ascorbate peroxidase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2125409 APX5 "ascorbate peroxidase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000044163 ccp1 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
TAIR|locus:2204735 TAPX "thylakoidal ascorbate peroxidase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|A4R606 MGG_10368 "Putative heme-binding peroxidase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
ASPGD|ASPL0000029968 AN5440 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|A4QVH4 CCP1 "Cytochrome c peroxidase, mitochondrial" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
TAIR|locus:2137435 SAPX "stromal ascorbate peroxidase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q05431APX1_ARATH1, ., 1, 1, ., 1, ., 1, 10.78100.74450.548yesno
Q9FE01APX2_ORYSJ1, ., 1, 1, ., 1, ., 1, 10.74260.73910.5418yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.11.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_IX1399
SubName- Full=Putative uncharacterized protein; (249 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.XVI.1375.1
L-gulono-1,4-lactone dehydrogenase (EC-1.3.2.3) (553 aa)
     •  0.899
estExt_fgenesh4_pm.C_280146
SubName- Full=Putative uncharacterized protein; (434 aa)
     •  0.899
estExt_fgenesh4_pg.C_LG_I2142
hypothetical protein (478 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query184
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 2e-80
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 2e-74
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 7e-72
PLN02608 289 PLN02608, PLN02608, L-ascorbate peroxidase 4e-69
pfam00141180 pfam00141, peroxidase, Peroxidase 3e-27
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 9e-27
COG0376 730 COG0376, KatG, Catalase (peroxidase I) [Inorganic 3e-22
TIGR00198 716 TIGR00198, cat_per_HPI, catalase/peroxidase HPI 9e-14
cd00649 409 cd00649, catalase_peroxidase_1, N-terminal catalyt 1e-13
PRK15061 726 PRK15061, PRK15061, catalase/hydroperoxidase HPI(I 6e-11
cd00692 328 cd00692, ligninase, Ligninase and other manganese- 7e-11
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 5e-10
COG0376 730 COG0376, KatG, Catalase (peroxidase I) [Inorganic 4e-06
cd08200 297 cd08200, catalase_peroxidase_2, C-terminal non-cat 7e-06
PRK15061 726 PRK15061, PRK15061, catalase/hydroperoxidase HPI(I 5e-05
TIGR00198 716 TIGR00198, cat_per_HPI, catalase/peroxidase HPI 9e-04
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information 
 Score =  239 bits (610), Expect = 2e-80
 Identities = 107/137 (78%), Positives = 125/137 (91%)

Query: 1   MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTM 60
           MTKNYPTVSEDYKKAVEKC+RKLRG IAEKNCAP+M+R+AWHSAGT+D +++TGGPFGTM
Sbjct: 1   MTKNYPTVSEDYKKAVEKCRRKLRGLIAEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTM 60

Query: 61  RLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRD 120
           R  AEQAH AN+G+ IA+RLL+P +EQFPTIS+AD +QLAGVV VEVTGGPDIPFHPGR+
Sbjct: 61  RFDAEQAHGANSGIHIALRLLDPIREQFPTISFADFHQLAGVVAVEVTGGPDIPFHPGRE 120

Query: 121 DKAEPPQEGRLPDAKQG 137
           DK +PP EGRLPDA +G
Sbjct: 121 DKPQPPPEGRLPDATKG 137

Length = 250
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|223453 COG0376, KatG, Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|232870 TIGR00198, cat_per_HPI, catalase/peroxidase HPI Back     alignment and domain information
>gnl|CDD|173824 cd00649, catalase_peroxidase_1, N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>gnl|CDD|237891 PRK15061, PRK15061, catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>gnl|CDD|223453 COG0376, KatG, Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|173828 cd08200, catalase_peroxidase_2, C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>gnl|CDD|237891 PRK15061, PRK15061, catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>gnl|CDD|232870 TIGR00198, cat_per_HPI, catalase/peroxidase HPI Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 184
PLN02879251 L-ascorbate peroxidase 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
PLN02608 289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
cd00692 328 ligninase Ligninase and other manganese-dependent 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649 409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
PLN03030 324 cationic peroxidase; Provisional 100.0
cd00693 298 secretory_peroxidase Horseradish peroxidase and re 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 99.98
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 99.95
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 99.95
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.92
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.46
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information 
Probab=100.00  E-value=1.8e-47  Score=328.54  Aligned_cols=157  Identities=66%  Similarity=1.100  Sum_probs=151.7

Q ss_pred             CCCCCCCCcHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHhhhccccccCCCCCCCCeeEeccccccCcCCCchHHHHHH
Q 030001            1 MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRL   80 (184)
Q Consensus         1 ~~~~~~~~~~~y~~~v~~v~~~l~~~l~~~~~a~~~LRLaFHDc~t~d~~~~~gGcDgSI~l~~E~~~~~N~gL~~~~~~   80 (184)
                      |-|-+|+++++|+++++.++++|.+++++++|+|.+|||+||||+|||..++.|||||||+|.+|+++++|.||+.++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~~E~~~~~N~gL~~~~~~   81 (251)
T PLN02879          2 VKKSYPEVKEEYKKAVQRCKRKLRGLIAEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHPQELAHDANNGLDIAVRL   81 (251)
T ss_pred             CcccCCCccHHHHHHHHHHHHHHHHHHhCCCchhHhHHHHHhhhccccCCCCCCCCCeeecChhhccCCCcCChHHHHHH
Confidence            55778999999999999999999999999999999999999999999999999999999999999999999999889999


Q ss_pred             HHHHHHhCCCCChHHHHHHHHHHHHHhhCCCccccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCcchh
Q 030001           81 LEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGLWASATRILLLSLVATPWEG  157 (184)
Q Consensus        81 i~~iK~~~p~VS~ADlialAa~~AV~~~GGP~i~v~~GR~D~~~s~~~g~lP~p~~~~~~l~~~F~~~gl~~~~~~~  157 (184)
                      |++||++++.|||||||+|||++||+++|||.|+|++||+|+.++.++++||.|+.++++|++.|..+||+..++|+
T Consensus        82 i~~iK~~~~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVA  158 (251)
T PLN02879         82 LDPIKELFPILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPPEGRLPQATKGVDHLRDVFGRMGLNDKDIVA  158 (251)
T ss_pred             HHHHHHHcCCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCcccCCCCCCCCHHHHHHHHHHcCCCHHHHee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998877764

>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query184
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 1e-61
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 2e-60
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 2e-60
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 2e-60
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 3e-60
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 6e-60
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 2e-59
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 3e-59
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 5e-59
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 2e-58
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 5e-58
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 9e-58
1iyn_A 295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 2e-23
3e2n_A287 Engineering Ascorbate Peroxidase Activity Into Cyto 1e-22
1s6v_A294 Structure Of A Cytochrome C Peroxidase-Cytochrome C 3e-20
2v23_A296 Structure Of Cytochrome C Peroxidase Mutant N184r Y 3e-20
4a71_A296 Cytochrome C Peroxidase In Complex With Phenol Leng 3e-20
2v2e_A294 Structure Of Isoniazid (Inh) Bound To Cytochrome C 3e-20
1stq_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 4e-20
1krj_A294 Engineering Calcium-Binding Site Into Cytochrome C 4e-20
1sog_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 4e-20
1jdr_A294 Crystal Structure Of A Proximal Domain Potassium Bi 4e-20
4a78_A296 Cytochrome C Peroxidase M119w In Complex With Guiac 4e-20
1kok_A294 Crystal Structure Of Mesopone Cytochrome C Peroxida 4e-20
1jci_A294 Stabilization Of The Engineered Cation-Binding Loop 4e-20
3e2o_A294 Crystal Structure Of Cytochrome C Peroxidase, N184r 4e-20
1ebe_A294 Laue Diffraction Study On The Structure Of Cytochro 4e-20
2xil_A294 The Structure Of Cytochrome C Peroxidase Compound I 5e-20
3r98_A293 Joint Neutron And X-Ray Structure Of Cytochrome C P 5e-20
2xj5_A294 The Structure Of Cytochrome C Peroxidase Compound I 5e-20
3m23_A291 Crystallographic And Single Crystal Spectral Analys 5e-20
2x07_A293 Cytochrome C Peroxidase: Engineered Ascorbate Bindi 5e-20
1cyf_A296 Identifying The Physiological Electron Transfer Sit 8e-20
1bek_A291 Effect Of Unnatural Heme Substitution On Kinetics O 9e-20
4a7m_A296 Cytochrome C Peroxidase S81w Mutant Length = 296 1e-19
2cep_A296 Role Of Met-230 In Intramolecular Electron Transfer 1e-19
2pcb_A296 Crystal Structure Of A Complex Between Electron Tra 1e-19
2ccp_A296 X-Ray Structures Of Recombinant Yeast Cytochrome C 1e-19
1cca_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 1e-19
1ccc_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 1e-19
2gb8_A294 Solution Structure Of The Complex Between Yeast Iso 1e-19
1cck_A291 Altering Substrate Specificity Of Cytochrome C Pero 1e-19
1cpd_A296 A Cation Binding Motif Stabilizes The Compound I Ra 1e-19
1ccb_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 1e-19
1cce_A291 Construction Of A Bis-Aquo Heme Enzyme And Replacem 1e-19
1ds4_A292 Cytochrome C Peroxidase H175g Mutant, Imidazole Com 1e-19
1ccl_A291 Probing The Strength And Character Of An Asp-His-X 1e-19
1kxm_A290 Crystal Structure Of Cytochrome C Peroxidase With A 1e-19
3exb_A295 Crystal Structure Of Cytochrome C Peroxidase With A 1e-19
1a2g_A291 Probing The Strength And Character Of An Asp-His-X 1e-19
1dcc_A296 2.2 Angstrom Structure Of Oxyperoxidase: A Model Fo 1e-19
1bep_A291 Effect Of Unnatural Heme Substitution On Kinetics O 1e-19
1cci_A294 How Flexible Are Proteins? Trapping Of A Flexible L 1e-19
1a2f_A291 Probing The Strength And Character Of An Asp-His-X 1e-19
1cmu_A294 The Role Of Aspartate-235 In The Binding Of Cations 1e-19
2rbu_X292 Cytochrome C Peroxidase In Complex With Cyclopentan 1e-19
1kxn_A289 Crystal Structure Of Cytochrome C Peroxidase With A 1e-19
2anz_A294 Cytochrome C Peroxidase In Complex With 2,6-Diamino 1e-19
1cpg_A296 A Cation Binding Motif Stabilizes The Compound I Ra 1e-19
1bej_A291 Interaction Between Proximal And Distals Regions Of 2e-19
2aqd_A294 Cytochrome C Peroxidase (Ccp) In Complex With 2,5- 2e-19
1beq_A291 Interaction Between Proximal And Distals Regions Of 2e-19
1bem_A291 Interaction Between Proximal And Distals Regions Of 2e-19
1mk8_A294 Crystal Structure Of A Mutant Cytochrome C Peroxida 2e-19
2ia8_A291 Kinetic And Crystallographic Studies Of A Redesigne 3e-19
6ccp_A296 Effect Of Arginine-48 Replacement On The Reaction B 3e-19
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 3e-19
1dse_A292 Cytochrome C Peroxidase H175g Mutant, Imidazole Com 3e-19
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 3e-19
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 3e-19
4ccx_A294 Altering Substrate Specificity At The Heme Edge Of 4e-19
3ccx_A294 Altering Substrate Specificity At The Heme Edge Of 4e-19
1dj1_A291 Crystal Structure Of R48a Mutant Of Cytochrome C Pe 9e-19
7ccp_A296 Effect Of Arginine-48 Replacement On The Reaction B 9e-19
4ccp_A296 X-Ray Structures Of Recombinant Yeast Cytochrome C 2e-18
5ccp_A296 Histidine 52 Is A Critical Residue For Rapid Format 2e-18
1bva_A294 Manganese Binding Mutant In Cytochrome C Peroxidase 2e-18
2dv1_A 748 Crystal Structure Of D141e Mutant Of Bpkatg Length 2e-10
1mwv_A 714 Crystal Structure Of Catalase-peroxidase Katg Of Bu 3e-10
1x7u_A 748 Crystal Structure Of The S324t Of Catalase-Peroxida 3e-10
3n3s_A 748 Crystal Structure Of The E198a Variant Of Burkholde 3e-10
3n3q_A 748 Crystal Structure Of The S324t Variant Of Burkholde 3e-10
2fxg_A 748 Crystal Structure Of Katg At Ph 4.5 Length = 748 3e-10
1ub2_A 720 Crystal Structure Of Catalase-Peroxidase From Synec 3e-10
3rrw_A268 Crystal Structure Of The Tl29 Protein From Arabidop 5e-10
3vlk_A 737 Crystal Structure Analysis Of The Ser305ala Variant 1e-08
3vlh_A 737 Crystal Structure Analysis Of The Arg409leu Variant 1e-08
3uw8_A 737 Crystal Structure Analysis Of The Ser305thr Variant 1e-08
3vlm_A 737 Crystal Structure Analysis Of The Met244ala Variant 1e-08
1itk_A 731 Crystal Structure Of Catalase-peroxidase From Haloa 1e-08
2dv2_A 748 Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8 1e-08
3n3r_A 748 Crystal Structure Of The E198a Variant Of Catalase- 1e-08
2fxj_A 748 Crystal Structure Of Katg At Ph 8.5 Length = 748 1e-08
1yyd_A 357 High Resolution Crystal Structure Of Manganese Pero 5e-08
1mn1_A 357 Manganese Peroxidase Substrate Binding Site Mutant 5e-08
1mn2_A 357 Manganese Peroxidase Substrate Binding Site Mutant 5e-08
2cca_A 740 Crystal Structure Of The Catalase-Peroxidase (Katg) 2e-06
2ccd_A 740 Crystal Structure Of The Catalase-Peroxidase (Katg) 2e-06
1sj2_A 743 Crystal Structure Of Mycobacterium Tuberculosis Cat 2e-06
3ut2_A 764 Crystal Structure Of Fungal Magkatg2 Length = 764 3e-05
1u2j_A 326 Crystal Structure Of The C-Terminal Domain From The 9e-05
1u2k_A 309 Crystal Structure Of The C-Terminal Domain From The 9e-05
3fm6_A 331 Crystal Structure Analysis Of Fungal Versatile Pero 3e-04
3q3u_A 338 Trametes Cervina Lignin Peroxidase Length = 338 7e-04
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure 
Iteration: 1

 Score =  231 bits (590), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 106/135 (78%), Positives = 120/135 (88%)
Query: 3   KNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRL 62
           K+YPTVS DY+KA+EK KRKLRGFIAEK CAPL+LR+AWHSAGT+D KTKTGGPFGT++ 
Sbjct: 2   KSYPTVSPDYQKAIEKAKRKLRGFIAEKKCAPLILRLAWHSAGTFDSKTKTGGPFGTIKH 61
Query: 63  AAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDK 122
            AE AH ANNGLDIAVRLLEP KEQFP +SYAD YQLAGVV VE+TGGP++PFHPGR+DK
Sbjct: 62  QAELAHGANNGLDIAVRLLEPIKEQFPIVSYADFYQLAGVVAVEITGGPEVPFHPGREDK 121
Query: 123 AEPPQEGRLPDAKQG 137
            EPP EGRLPDA +G
Sbjct: 122 PEPPPEGRLPDATKG 136
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|3E2N|A Chain A, Engineering Ascorbate Peroxidase Activity Into Cytochrome C Peroxidase Length = 287 Back     alignment and structure
>pdb|1S6V|A Chain A, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link Length = 294 Back     alignment and structure
>pdb|2V23|A Chain A, Structure Of Cytochrome C Peroxidase Mutant N184r Y36a Length = 296 Back     alignment and structure
>pdb|4A71|A Chain A, Cytochrome C Peroxidase In Complex With Phenol Length = 296 Back     alignment and structure
>pdb|2V2E|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytochrome C Peroxidase Mutant N184r Y36a Length = 294 Back     alignment and structure
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m3 Length = 294 Back     alignment and structure
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m2 Length = 294 Back     alignment and structure
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding Variant Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|4A78|A Chain A, Cytochrome C Peroxidase M119w In Complex With Guiacol Length = 296 Back     alignment and structure
>pdb|1KOK|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase (Mpccp) Length = 294 Back     alignment and structure
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|3E2O|A Chain A, Crystal Structure Of Cytochrome C Peroxidase, N184r Mutant Length = 294 Back     alignment and structure
>pdb|1EBE|A Chain A, Laue Diffraction Study On The Structure Of Cytochrome C Peroxidase Compound I Length = 294 Back     alignment and structure
>pdb|2XIL|A Chain A, The Structure Of Cytochrome C Peroxidase Compound I Length = 294 Back     alignment and structure
>pdb|3R98|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C Peroxidase Length = 293 Back     alignment and structure
>pdb|2XJ5|A Chain A, The Structure Of Cytochrome C Peroxidase Compound Ii Length = 294 Back     alignment and structure
>pdb|3M23|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of The Peroxidase Ferryl Intermediate Length = 291 Back     alignment and structure
>pdb|2X07|A Chain A, Cytochrome C Peroxidase: Engineered Ascorbate Binding Site Length = 293 Back     alignment and structure
>pdb|1CYF|A Chain A, Identifying The Physiological Electron Transfer Site Of Cytochrome C Peroxidase By Structure-Based Engineering Length = 296 Back     alignment and structure
>pdb|1BEK|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of Electron Transfer In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|4A7M|A Chain A, Cytochrome C Peroxidase S81w Mutant Length = 296 Back     alignment and structure
>pdb|2CEP|A Chain A, Role Of Met-230 In Intramolecular Electron Transfer Between The Oxyferryl Heme And Trp 191 In Cytochrome C Peroxidase Compound Ii Length = 296 Back     alignment and structure
>pdb|2PCB|A Chain A, Crystal Structure Of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase And Cytochrome C Length = 296 Back     alignment and structure
>pdb|2CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C Peroxidase And Three Heme-Cleft Mutants Prepared By Site-Directed Mutagenesis Length = 296 Back     alignment and structure
>pdb|1CCA|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|1CCC|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|2GB8|A Chain A, Solution Structure Of The Complex Between Yeast Iso-1- Cytochrome C And Yeast Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1CCK|A Chain A, Altering Substrate Specificity Of Cytochrome C Peroxidase Towards A Small Molecular Substrate Peroxidase By Substituting Tyrosine For Phe 202 Length = 291 Back     alignment and structure
>pdb|1CPD|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 Back     alignment and structure
>pdb|1CCB|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|1CCE|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement With Exogenous Ligand Length = 291 Back     alignment and structure
>pdb|1DS4|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex, Ph 6, 100k Length = 292 Back     alignment and structure
>pdb|1CCL|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|1KXM|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 290 Back     alignment and structure
>pdb|3EXB|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Pathway Excised In A Complex With A Peptide Wire Length = 295 Back     alignment and structure
>pdb|1A2G|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|1DCC|A Chain A, 2.2 Angstrom Structure Of Oxyperoxidase: A Model For The Enzyme:peroxide Complex Length = 296 Back     alignment and structure
>pdb|1BEP|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of Electron Transfer In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1CCI|A Chain A, How Flexible Are Proteins? Trapping Of A Flexible Loop Length = 294 Back     alignment and structure
>pdb|1A2F|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|1CMU|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An Artificial Cavity At The Radical Site Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|2RBU|X Chain X, Cytochrome C Peroxidase In Complex With Cyclopentane-Carboximidamide Length = 292 Back     alignment and structure
>pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 289 Back     alignment and structure
>pdb|2ANZ|A Chain A, Cytochrome C Peroxidase In Complex With 2,6-Diaminopyridine Length = 294 Back     alignment and structure
>pdb|1CPG|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 Back     alignment and structure
>pdb|1BEJ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|2AQD|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,5- Diaminopyridine Length = 294 Back     alignment and structure
>pdb|1BEQ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1BEM|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1MK8|A Chain A, Crystal Structure Of A Mutant Cytochrome C Peroxidase Showing A Novel Trp-Tyr Covalent Cross-Link Length = 294 Back     alignment and structure
>pdb|2IA8|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned Manganese-Binding Site In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|6CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between Cytochrome C Peroxidase And Hydrogen Peroxide Length = 296 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure
>pdb|1DSE|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex, With Phosphate Bound, Ph 6, 100k Length = 292 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|4CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|3CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1DJ1|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|7CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between Cytochrome C Peroxidase And Hydrogen Peroxide Length = 296 Back     alignment and structure
>pdb|4CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C Peroxidase And Three Heme-Cleft Mutants Prepared By Site-Directed Mutagenesis Length = 296 Back     alignment and structure
>pdb|5CCP|A Chain A, Histidine 52 Is A Critical Residue For Rapid Formation Of Cytochrome C Peroxidase Compound I Length = 296 Back     alignment and structure
>pdb|1BVA|A Chain A, Manganese Binding Mutant In Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|2DV1|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg Length = 748 Back     alignment and structure
>pdb|1MWV|A Chain A, Crystal Structure Of Catalase-peroxidase Katg Of Burkholderia Pseudomallei Length = 714 Back     alignment and structure
>pdb|1X7U|A Chain A, Crystal Structure Of The S324t Of Catalase-Peroxidase Katg Length = 748 Back     alignment and structure
>pdb|3N3S|A Chain A, Crystal Structure Of The E198a Variant Of Burkholderia Pseudomallei Catalase-Peroxidase Katg With Inh Length = 748 Back     alignment and structure
>pdb|3N3Q|A Chain A, Crystal Structure Of The S324t Variant Of Burkholderia Pseudomallei Katg With Isonicotinic Acid Hydrazide Bound Length = 748 Back     alignment and structure
>pdb|2FXG|A Chain A, Crystal Structure Of Katg At Ph 4.5 Length = 748 Back     alignment and structure
>pdb|1UB2|A Chain A, Crystal Structure Of Catalase-Peroxidase From Synechococcus Pcc 7942 Length = 720 Back     alignment and structure
>pdb|3RRW|A Chain A, Crystal Structure Of The Tl29 Protein From Arabidopsis Thaliana Length = 268 Back     alignment and structure
>pdb|3VLK|A Chain A, Crystal Structure Analysis Of The Ser305ala Variant Of Katg From Haloarcula Marismortui Length = 737 Back     alignment and structure
>pdb|3VLH|A Chain A, Crystal Structure Analysis Of The Arg409leu Variants Of Katg From Haloarcula Marismortui Length = 737 Back     alignment and structure
>pdb|3UW8|A Chain A, Crystal Structure Analysis Of The Ser305thr Variants Of Katg From Haloarcula Marismortui Length = 737 Back     alignment and structure
>pdb|3VLM|A Chain A, Crystal Structure Analysis Of The Met244ala Variant Of Katg From Haloarcula Marismortui Length = 737 Back     alignment and structure
>pdb|1ITK|A Chain A, Crystal Structure Of Catalase-peroxidase From Haloarcula Marismortui Length = 731 Back     alignment and structure
>pdb|2DV2|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8.0 Length = 748 Back     alignment and structure
>pdb|3N3R|A Chain A, Crystal Structure Of The E198a Variant Of Catalase-Peroxidase Katg Of Burkholderia Pseudomallei Length = 748 Back     alignment and structure
>pdb|2FXJ|A Chain A, Crystal Structure Of Katg At Ph 8.5 Length = 748 Back     alignment and structure
>pdb|1YYD|A Chain A, High Resolution Crystal Structure Of Manganese Peroxidase Length = 357 Back     alignment and structure
>pdb|1MN1|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant D179n Length = 357 Back     alignment and structure
>pdb|1MN2|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant E35q, D179n Length = 357 Back     alignment and structure
>pdb|2CCA|A Chain A, Crystal Structure Of The Catalase-Peroxidase (Katg) And S315t Mutant From Mycobacterium Tuberculosis Length = 740 Back     alignment and structure
>pdb|2CCD|A Chain A, Crystal Structure Of The Catalase-Peroxidase (Katg) And S315t Mutant From Mycobacterium Tuberculosis Length = 740 Back     alignment and structure
>pdb|1SJ2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Catalase-Peroxidase Length = 743 Back     alignment and structure
>pdb|3UT2|A Chain A, Crystal Structure Of Fungal Magkatg2 Length = 764 Back     alignment and structure
>pdb|1U2J|A Chain A, Crystal Structure Of The C-Terminal Domain From The Catalase-Peroxidase Katg Of Escherichia Coli (P21 21 21) Length = 326 Back     alignment and structure
>pdb|1U2K|A Chain A, Crystal Structure Of The C-Terminal Domain From The Catalase- Peroxidase Katg Of Escherichia Coli (I41) Length = 309 Back     alignment and structure
>pdb|3FM6|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase From Pleurotus Eryngii Length = 331 Back     alignment and structure
>pdb|3Q3U|A Chain A, Trametes Cervina Lignin Peroxidase Length = 338 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query184
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 4e-66
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 2e-63
1iyn_A 295 Chloroplastic ascorbate peroxidase; hydrogen perox 4e-59
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 7e-59
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 2e-51
3m5q_A 357 Manganese peroxidase 1; heme, Mn(II)-binding site, 1e-40
3fmu_A 331 VersatIle peroxidase VPL2; class II (fungal) perox 8e-40
2e39_A 344 Peroxidase; heme protein, coordination geometry of 2e-35
3q3u_A 338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 9e-35
1llp_A 343 LIP4.15, lignin peroxidase; heme protein, glyco pr 5e-34
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 2e-21
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 3e-12
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 1e-20
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 3e-10
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 4e-19
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 2e-10
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 1e-18
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 3e-08
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 4e-18
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 4e-11
1u2k_A 309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 1e-09
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
 Score =  202 bits (517), Expect = 4e-66
 Identities = 52/134 (38%), Positives = 73/134 (54%), Gaps = 5/134 (3%)

Query: 9   SEDYKKAVEKCKRKLRGFIAEK-NCAPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQ 66
           SE+    +   +  +   I+EK    P ++R+AWH A +YD   K G P   +MR   E 
Sbjct: 2   SEEPPFDIRALRADIEDMISEKLELGPSLIRLAWHEAASYDCFKKDGSPNSASMRFKPEC 61

Query: 67  AHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP- 125
            ++ N GLDI  + LE  K+++P ISYADL+ LA  V +E  GGP IPF  GR D  +  
Sbjct: 62  LYAGNKGLDIPRKALETLKKKYPQISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGS 121

Query: 126 --PQEGRLPDAKQG 137
               +GRLPD  + 
Sbjct: 122 VCGPDGRLPDGSKT 135
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Length = 268 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Length = 720 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Length = 720 Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Length = 731 Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Length = 731 Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Length = 740 Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Length = 740 Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Length = 748 Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Length = 748 Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Length = 764 Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Length = 764 Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Length = 309 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query184
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
1iyn_A 295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3fmu_A 331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
1qgj_A 300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1fhf_A 304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
3hdl_A 304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1gwu_A 309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1sch_A 294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1bgp_A 309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
3m5q_A 357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
1pa2_A 306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
3q3u_A 338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
2e39_A 344 Peroxidase; heme protein, coordination geometry of 100.0
1llp_A 343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 99.98
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 99.98
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 99.97
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 99.97
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
Probab=100.00  E-value=1.4e-46  Score=323.21  Aligned_cols=157  Identities=68%  Similarity=1.070  Sum_probs=150.4

Q ss_pred             CCCCCCcHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHhhhccccccCCCCCCCCeeEeccccccCcCCCchHHHHHHHH
Q 030001            3 KNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLE   82 (184)
Q Consensus         3 ~~~~~~~~~y~~~v~~v~~~l~~~l~~~~~a~~~LRLaFHDc~t~d~~~~~gGcDgSI~l~~E~~~~~N~gL~~~~~~i~   82 (184)
                      |.+|+++++|+++++++|++|++++++++++|.+|||+||||++||++.+.|||||||++.+|+++++|.+|.+++++|+
T Consensus        14 ~~~~~~~~~y~~~~~~~r~~v~~~~~d~~~aa~llRL~FHDc~gcD~s~~~gg~~gsi~~~~E~~~~~N~~l~~g~~~i~   93 (261)
T 2vcn_A           14 KSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAAHSAGTFDKGTKTGGPFGTIKHPAELAHSANNGLDIAVRLLE   93 (261)
T ss_dssp             CCCCCCCHHHHHC-CHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCBTTTTBCSSSSGGGSHHHHTSGGGTTHHHHHHHHH
T ss_pred             CcCCCCcHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHccCCCCCcccCCCCCCccccchhhccCccccCHHHHHHHHH
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999988999999


Q ss_pred             HHHHhCCCCChHHHHHHHHHHHHHhhCCCccccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH-HhcCCCCCcchhhh
Q 030001           83 PFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGLWASATRI-LLLSLVATPWEGAT  159 (184)
Q Consensus        83 ~iK~~~p~VS~ADlialAa~~AV~~~GGP~i~v~~GR~D~~~s~~~g~lP~p~~~~~~l~~~F-~~~gl~~~~~~~~~  159 (184)
                      +||+++++|||||||+|||++||+.+|||.|+|++||+|+.++.++++||.|+.++++|++.| +.+||+.+++|+++
T Consensus        94 ~iK~~~~~VScADilalAardaV~~~GGP~~~v~~GRrD~~~s~~~~~lP~p~~~~~~l~~~F~~~~Gl~~~d~VaLs  171 (261)
T 2vcn_A           94 PLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALS  171 (261)
T ss_dssp             HHHHTCTTSCHHHHHHHHHHHHHHHTTCCCCCCCCCCCCCSSCCCSCCSCCTTCCHHHHHHHHTTTTCCCHHHHHHHH
T ss_pred             HHHHHhCCCCHHHHHHHHhhhheeeccCCcccCcCCCCCCCCCCcccccCCcccCHHHHHHHHHhhCCCChHHheeec
Confidence            999999999999999999999999999999999999999999998999999999999999999 99999888887543
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 184
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 7e-52
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 8e-38
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 3e-35
d1ub2a1 406 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Syne 6e-32
d1yyda1 357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 3e-31
d1itka1 406 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Arch 5e-28
d1mwva1 406 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burk 5e-28
d2ccaa1 410 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Myco 8e-27
d1llpa_ 343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 3e-25
d2e39a1 336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 4e-24
d1itka2 308 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Arc 2e-23
d2ccaa2285 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Myc 2e-22
d1u2ka_ 292 a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholder 2e-21
d1ub2a2 294 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Syn 7e-21
d1mwva2 308 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Bur 1e-19
d1gwua_ 307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 5e-18
d1qgja_ 300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 7e-18
d1pa2a_ 306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 8e-18
d1scha_ 294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-17
d1fhfa_ 304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 2e-16
d1bgpa_ 309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 1e-12
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Ascorbate peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  164 bits (416), Expect = 7e-52
 Identities = 106/136 (77%), Positives = 119/136 (87%)

Query: 3   KNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRL 62
           K+YPTVS DY+KAVEK K+KLRGFIAEK CAPLMLR+AWHSAGT+D  TKTGGPFGT++ 
Sbjct: 3   KSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPFGTIKH 62

Query: 63  AAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDK 122
            AE AHSANNGLDIAVRLLEP K +FP +SYAD YQLAGVV VEVTGGP++PFHPGR+DK
Sbjct: 63  PAELAHSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDK 122

Query: 123 AEPPQEGRLPDAKQGL 138
            EPP EGRLPDA +G 
Sbjct: 123 PEPPPEGRLPDATKGS 138
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Length = 406 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 406 Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 406 Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Length = 410 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 308 Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Length = 285 Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 292 Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Length = 294 Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 308 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query184
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1pa2a_ 306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1yyda1 357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d1fhfa_ 304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1scha_ 294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1qgja_ 300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_ 307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d2e39a1 336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1llpa_ 343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d1bgpa_ 309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1itka1 406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 99.98
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.97
d1mwva1 406 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.97
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.97
d1ub2a1 406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 99.97
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.97
d2ccaa1 410 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.96
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 99.96
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 99.96
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Ascorbate peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=9.2e-43  Score=295.29  Aligned_cols=156  Identities=69%  Similarity=1.107  Sum_probs=149.1

Q ss_pred             CCCCCCCcHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHhhhccccccCCCCCCCCeeEeccccccCcCCCchHHHHHHH
Q 030001            2 TKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLL   81 (184)
Q Consensus         2 ~~~~~~~~~~y~~~v~~v~~~l~~~l~~~~~a~~~LRLaFHDc~t~d~~~~~gGcDgSI~l~~E~~~~~N~gL~~~~~~i   81 (184)
                      .|.+|.+.++|++.++++++.|+.++.++.++|.+|||+||||+||+..++.|||||||++.+|+++++|.||+.+.+++
T Consensus         2 ~ks~p~~~~~~~~~~~~~~~~~~~~~~~~~~ap~llRl~FHDc~tf~~~~~~gg~~gs~~~~~E~~~~~N~Gl~~i~~~~   81 (250)
T d1oafa_           2 GKSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPFGTIKHPAELAHSANNGLDIAVRLL   81 (250)
T ss_dssp             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCBTTTTBCSSSSGGGSHHHHTSGGGTTHHHHHHHH
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHcccccccCCCCCCCCCcccccccccccccccCHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCCChHHHHHHHHHHHHHhhCCCccccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH-hcCCCCCcchh
Q 030001           82 EPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGLWASATRIL-LLSLVATPWEG  157 (184)
Q Consensus        82 ~~iK~~~p~VS~ADlialAa~~AV~~~GGP~i~v~~GR~D~~~s~~~g~lP~p~~~~~~l~~~F~-~~gl~~~~~~~  157 (184)
                      +++|++||.|||||||+|||++||+++|||.|+|++||+|+..+.+++.+|.|..++++|++.|. .+||+..++|+
T Consensus        82 ~~~~~~~p~VS~ADiialAa~~Av~~~GGp~~~~~~GR~D~~~~~~~g~~P~p~~~~~~l~~~F~~~~Gl~~~e~Va  158 (250)
T d1oafa_          82 EPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVA  158 (250)
T ss_dssp             HHHHHTCTTSCHHHHHHHHHHHHHHHTTCCCCCCCCCCCCCSSCCCSCCSCCTTCCHHHHHHHHTTTTCCCHHHHHH
T ss_pred             HHHHhccCcccHHHHHHHHHHHHHHhcCCceeccCCCCccccCCCCcccCCChHHHHHHHHHHHHHhcCCCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999997 57998777663
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure