Citrus Sinensis ID: 030078

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180---

MAEEQVKKVEAETPAAPAPAPALAPAPAPAVPNNDVAEEKAVTQLHDQEKPVDDSKALAVVDHVALAEVEKEKRESFIKAWEESEKTKAENKAQKKLSAVAAWENSKKASLEAKLKKIEEQLERKKAEYAEKMKNKVALVHKEAEEKRAMVEARRGEDVLKAEEIAAKYRATGTTPKKLLGCF

ccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccc

*************************************************************DHVALA************************KAQKKLSAVAAWE*****************************************************************RATGTTPKKLLGCF

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

MAEEQVKKVEAETPAAPAPAPALAPAPAPAVPNNDVAEEKAVTQLHDQEKPVDDSKALAVVDHVALAEVEKEKRESFIKAWEESEKTKAENKAQKKLSAVxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVHKEAEEKRAMVEARRGEDVLKAEEIAAKYRATGTTPKKLLGCF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Remorin	Binds to both simple and complex galacturonides. May be involved in cell-to-cell signaling and molecular transport.	probable	P93788
Uncharacterized protein At3g61260		probable	Q9M2D8

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1QZV, chain F
Confidence level:probable
Coverage over the Query: 15-24
View the alignment between query and template
View the model in PyMOL