Citrus Sinensis ID: 030079

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180---
Protein Sequence
MMSILTTIGPQIYLNCNVPDGVWYLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRITQKRLYGDKKEEDSSSLCRVFLSGKQSPNHEMQQKLFSANINNETHSHSTELSFDKDKDDTRQVSIIRHEVCQPQHSGLVFCLLEWISCLNFVWFSLIFK
Secondary Structure (PSIPRED)
ccccccccccEEEEccccccccccccccccccccccccEEccccccEEEEccEEEEEEEEEEEEccccccccccccEEEEEEcccccccccccccccEEEEEEEEccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEccccccccccccccEEEEEcccccccccccEEEEcccccEEEcccEEEEEEEEEEEEEccccccccccEEEEEEEcccccccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccHHHHHHcc
Coil and Loop (DISEMBL)
mmsilttigpqiylncnvpdGVWYLVCSkentsaqhgqwrakgetceifsnsyiigWRTTLEFfegqvpnerktDWVMQEFRITQkrlygdkkeedssSLCRVFlsgkqspnheMQQKLFSANinnethshstelsfdkdkddtrqvsiirhevcqpqhsglVFCLLEWISCLNFVWFSLIFK
Flexible Loop (DISEMBL)
MMSILTTIGPQIYLNCNVPDGVWYLVCSKENTsaqhgqwrakgetCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRITQkrlygdkkeedsSSLCRVFLSGKQSPNHEMQQKLFSANINNETHshstelsfdkdkDDTRQVSIIRhevcqpqhSGLVFCLLEWISCLNFVWFSLIFK
Low Complexity Region (SEG)
MMSILTTIGPQIYLNCNVPDGVWYLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRITQKRLYGDKKEEDSSSLCRVFLSGKQSPNHEMQQKLFSANINNETHSHSTELSFDKDKDDTRQVSIIRHEVCQPQHSGLVFCLLEWISCLNFVWFSLIFK
Disordered region (IsUnstruct)
***ILTTIGPQIYLNCNVPDGVWYLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRITQKRLY*********************************************************VSIIRHEVCQPQHSGLVFCLLEWISCLNFVWFSLIF*
Disordered Region (DISOPRED)
**SI*TTIGPQIYLNCNVPDGVWYLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFR***************SSLCRV************************************************************FCLLEWISCLNFVWFSLIFK
Disordered Region (DISEMBL)
MMSILTTIGPQIYLNCNVPDGVWYLVCSKEN**********KGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRITQKRLY*********SLCRVFLSGKQSPNHEMQQKLFSANINNET*************DDTRQVSIIRHEVCQPQHSGLVFCLLEWISCLNFVWFSLIFK
Disordered Region (DISPRO)
MMSILTTIGPQIYLNCNVPDGVWYLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRITQKRLYGDKKEEDSSSLCRVFLSGK**********************************************C*PQHSGLVFCLLEWISCLNFVWFSLIFK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMSILTTIGPQIYLNCNVPDGVWYLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRITQKRLYGDKKEEDSSSLCRVFLSGKQSPNHEMQQKLFSANINNETHSHSTELSFDKDKDDTRQVSIIRHEVCQPQHSGLVFCLLEWISCLNFVWFSLIFK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	183	2.2.26 [Sep-21-2011]
Q84K00	567	NAC domain-containing pro	no	no	0.486	0.156	0.303	2e-09
Q5Z6B6	276	NAC domain-containing pro	no	no	0.431	0.286	0.373	2e-09
Q9FLJ2	336	NAC domain-containing pro	no	no	0.486	0.264	0.310	1e-08
Q9SV87	341	Protein BEARSKIN1 OS=Arab	no	no	0.448	0.240	0.353	2e-08
Q9FWX2	395	NAC domain-containing pro	no	no	0.431	0.2	0.333	2e-08
Q84WP6	365	NAC domain-containing pro	no	no	0.442	0.221	0.287	3e-08
Q84TE6	324	NAC domain-containing pro	no	no	0.442	0.25	0.345	3e-08
Q9C878	305	Protein BEARSKIN1 OS=Arab	no	no	0.426	0.255	0.382	4e-08
Q8GY42	323	NAC transcription factor	no	no	0.437	0.247	0.323	9e-08
Q9M274	334	NAC domain-containing pro	no	no	0.398	0.218	0.328	2e-07

>sp|Q84K00|NAC78_ARATH NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2

 Score = 62.0 bits (149), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 49/89 (55%)

Query: 28  SKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRITQKR 87
           SK N + + G W+  G+  EI + S ++G + TL + +G+ P   +T+WVM E+R++ + 
Sbjct: 81  SKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRGERTNWVMHEYRLSDED 140

Query: 88  LYGDKKEEDSSSLCRVFLSGKQSPNHEMQ 116
           L      +++  LCR+F      P +  Q
Sbjct: 141 LKKAGVPQEAYVLCRIFQKSGTGPKNGEQ 169

Arabidopsis thaliana (taxid: 3702)

>sp|Q5Z6B6|NAC76_ORYSJ NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2

 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 4/83 (4%)

Query: 24  YLVCSKENTSAQHGQWRAKGETCEIF-SNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFR 82
           Y   ++ N +   G W+A G    IF +N+  IG R TL F+ G+ P+ +KTDW+M E+R
Sbjct: 79  YPTGTRTNRATTAGFWKATGRDKAIFLANACRIGMRKTLVFYVGRAPHGKKTDWIMHEYR 138

Query: 83  ITQKRLYGDKKEEDSSSLCRVFL 105
           + Q  +     +ED   +CRVF+
Sbjct: 139 LDQDNV---DVQEDGWVVCRVFM 158

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1

 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 14/103 (13%)

Query: 23  WYLVCSKE---------NTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERK 73
           WY  C ++         N + + G W+A G+  EI+    ++G + TL F+ G+ P  +K
Sbjct: 72  WYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRAPKGQK 131

Query: 74  TDWVMQEFRITQKRLYGD--KKEEDSSSLCRVF---LSGKQSP 111
           T+WVM E+R+  K    +  K  ++   +CRVF     GK+ P
Sbjct: 132 TNWVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQKSAGGKKIP 174

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SV87|BRN2_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN2 PE=2 SV=1

 Score = 59.3 bits (142), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 44/82 (53%)

Query: 24  YLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRI 83
           Y   S+ N +   G W+A G    I ++   IG R TL F++G+ P+ +KTDW+M E+R+
Sbjct: 78  YPTGSRTNRATHAGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRL 137

Query: 84  TQKRLYGDKKEEDSSSLCRVFL 105
                      ED   +CRVF+
Sbjct: 138 EDADDPQANPSEDGWVVCRVFM 159

Transcription activator. Together with BRN1 and SMB, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FWX2|NAC7_ARATH NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2

 Score = 58.9 bits (141), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)

Query: 24  YLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRI 83
           Y   ++ N + + G W+A G    I+    +IG R TL F++G+ PN +K+DW+M E+R+
Sbjct: 76  YPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRL 135

Query: 84  TQKRLYGDKKEEDSSSLCRVF 104
                     +E+   +CRVF
Sbjct: 136 ETDE--NGTPQEEGWVVCRVF 154

Transcription factor probably involved in xylem formation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q84WP6|NAC43_ARATH NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2

 Score = 58.5 bits (140), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 13/94 (13%)

Query: 24  YLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRI 83
           Y   ++ N +   G W+A G    I+SN   IG R TL F++G+ P+ +K+DW+M E+R+
Sbjct: 85  YPTGTRTNRATAAGFWKATGRDKIIYSNGRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 144

Query: 84  TQK-------------RLYGDKKEEDSSSLCRVF 104
                            + G+  +++   +CR+F
Sbjct: 145 DDNIISPEDVTVHEVVSIIGEASQDEGWVVCRIF 178

Transcription activator of genes involved in biosynthesis of secondary walls. Together with NST2 and NST3, required for the secondary cell wall thickening of sclerenchymatous fibers, secondary xylem (tracheary elements), and of the anther endocethium, which is necessary for anther dehiscence. May also regulates the secondary cell wall lignification of other tissues.

Arabidopsis thaliana (taxid: 3702)

>sp|Q84TE6|NAC22_ARATH NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2

 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 3/84 (3%)

Query: 24  YLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRI 83
           Y    + N +   G W+A G+   I     ++G R TL F++G+ P  RKTDWVM EFR+
Sbjct: 86  YATGLRTNRATATGYWKATGKDRTILRKGKLVGMRKTLVFYQGRAPRGRKTDWVMHEFRL 145

Query: 84  T---QKRLYGDKKEEDSSSLCRVF 104
                   +     ++   LCRVF
Sbjct: 146 QGSHHPPNHSLSSPKEDWVLCRVF 169

Transcriptional activator that mediates auxin signaling to promote lateral root development. Activates the expression of two downstream auxin-responsive genes, DBP and AIR3.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C878|BRN1_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1

 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 3/81 (3%)

Query: 24  YLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRI 83
           Y   S+ N +   G W+A G    I ++   IG R TL F++G+ P+ +KTDW+M E+RI
Sbjct: 77  YPTGSRTNRATHSGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRI 136

Query: 84  TQKRLYGDKKEEDSSSLCRVF 104
                  D   ED   +CRVF
Sbjct: 137 EDTE---DDPCEDGWVVCRVF 154

Transcription activator. Together with SMB and BRN2, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GY42|NAC25_ARATH NAC transcription factor 25 OS=Arabidopsis thaliana GN=NAC025 PE=2 SV=1

 Score = 56.6 bits (135), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 19/99 (19%)

Query: 19  PDGVWYLVCSKENTSAQHGQWRAKGETCEIFS-NSYIIGWRTTLEFFEGQVPNERKTDWV 77
           P+GV      + N +A  G W+A G    IF+ NS+ +G +  L F+ G+ P   KTDW+
Sbjct: 83  PNGV------RPNRAATSGYWKATGTDKPIFTCNSHKVGVKKALVFYGGKPPKGIKTDWI 136

Query: 78  MQEFRITQKRLYGDKKEEDSSS------------LCRVF 104
           M E+R+T   L    K  D ++            LCR++
Sbjct: 137 MHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIY 175

Transcription factor of the NAC family. May be associated with anther development and pollen production.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M274|NAC66_ARATH NAC domain-containing protein 66 OS=Arabidopsis thaliana GN=NAC066 PE=2 SV=1

 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 41/73 (56%)

Query: 24  YLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRI 83
           Y   ++ N +   G W+A G    I++N   IG R TL F++G+ P+ +K+DW+M E+R+
Sbjct: 80  YPTGTRTNRATTVGFWKATGRDKTIYTNGDRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 139

Query: 84  TQKRLYGDKKEED 96
            +  L     + D
Sbjct: 140 DESVLISSCGDHD 152

Transcription activator of genes involved in biosynthesis of secondary walls. Together with NST1, required for the secondary cell wall thickening of the anther endocethium, which is necessary for anther dehiscence. May also regulates the secondary cell wall lignification of other tissues such as tracheary elements.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	183
255538558	388	conserved hypothetical protein [Ricinus	0.879	0.414	0.453	7e-33
118485763	415	unknown [Populus trichocarpa]	0.814	0.359	0.423	2e-31
224136574	385	NAC domain protein, IPR003441 [Populus t	0.814	0.387	0.423	2e-31
225458374	383	PREDICTED: uncharacterized protein LOC10	0.688	0.328	0.480	2e-24
302142444	355	unnamed protein product [Vitis vinifera]	0.688	0.354	0.480	2e-24
302398995	359	NAC domain class transcription factor [M	0.693	0.353	0.459	5e-24
449470009	199	PREDICTED: uncharacterized protein LOC10	0.622	0.572	0.398	5e-18
414864424	664	TPA: putative NAC domain transcription f	0.633	0.174	0.285	3e-10
357464263	620	NAC domain-containing protein [Medicago	0.497	0.146	0.33	3e-10
357464261	593	NAC domain-containing protein [Medicago	0.497	0.153	0.33	3e-10

>gi|255538558|ref|XP_002510344.1| conserved hypothetical protein [Ricinus communis] gi|223551045|gb|EEF52531.1| conserved hypothetical protein [Ricinus communis]

 Score =  145 bits (366), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 73/161 (45%), Positives = 105/161 (65%)

Query: 3   SILTTIGPQIYLNCNVPDGVWYLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLE 62
           +++T + P  Y    +P G+WYL+ SKEN +   G W+ KGE  ++FS SYI GW TTLE
Sbjct: 36  NVITDVNPYNYSPSYLPQGIWYLIRSKENGATDLGFWKVKGEASKLFSTSYITGWMTTLE 95

Query: 63  FFEGQVPNERKTDWVMQEFRITQKRLYGDKKEEDSSSLCRVFLSGKQSPNHEMQQKLFSA 122
           FFEGQVP ERKT+W MQE+ ITQK    + K++++SSLCRVFL G+Q  +++ +Q++ S 
Sbjct: 96  FFEGQVPRERKTNWQMQEYWITQKGPGENSKKKETSSLCRVFLGGEQGLDYQKRQEMASL 155

Query: 123 NINNETHSHSTELSFDKDKDDTRQVSIIRHEVCQPQHSGLV 163
           +I + T  HSTE    K  + T   S  +H V +   +G+V
Sbjct: 156 HIADHTLVHSTESIVLKANNGTSNGSTSKHVVDKDDETGVV 196

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118485763|gb|ABK94731.1| unknown [Populus trichocarpa]

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 69/163 (42%), Positives = 98/163 (60%), Gaps = 14/163 (8%)

Query: 3   SILTTIGPQIYLNCNVPDGVWYLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLE 62
           +++T + P IY   N+P+ +WYL+  KEN     G W+ KGE C++FSNS I GWRTT E
Sbjct: 67  NVITDVNPYIYAPSNLPEDIWYLLRVKENDDTGLGFWKVKGEACKLFSNSAITGWRTTFE 126

Query: 63  FFEGQVPNERKTDWVMQEFRITQKRLYGDKKEEDSSSLCRVFLSGKQSPNHEMQ------ 116
           FFEGQVP+ERKTDW+MQE+ ITQK     +K +++ SLCRVFL G+Q+ +HE Q      
Sbjct: 127 FFEGQVPHERKTDWLMQEYWITQKEHIEKRKAKEARSLCRVFLGGEQALDHENQLIASPH 186

Query: 117 --------QKLFSANINNETHSHSTELSFDKDKDDTRQVSIIR 151
                   Q +    + + +H  S+    +KD +    V+  R
Sbjct: 187 SDTHIDLTQSIGPGTLADTSHGSSSNPEVNKDDETENMVATGR 229

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224136574|ref|XP_002326894.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222835209|gb|EEE73644.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 69/163 (42%), Positives = 98/163 (60%), Gaps = 14/163 (8%)

Query: 3   SILTTIGPQIYLNCNVPDGVWYLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLE 62
           +++T + P IY   N+P+ +WYL+  KEN     G W+ KGE C++FSNS I GWRTT E
Sbjct: 37  NVITDVNPYIYAPSNLPEDIWYLLRVKENDDTGLGFWKVKGEACKLFSNSAITGWRTTFE 96

Query: 63  FFEGQVPNERKTDWVMQEFRITQKRLYGDKKEEDSSSLCRVFLSGKQSPNHEMQ------ 116
           FFEGQVP+ERKTDW+MQE+ ITQK     +K +++ SLCRVFL G+Q+ +HE Q      
Sbjct: 97  FFEGQVPHERKTDWLMQEYWITQKEHIEKRKAKEARSLCRVFLGGEQALDHENQLIASPH 156

Query: 117 --------QKLFSANINNETHSHSTELSFDKDKDDTRQVSIIR 151
                   Q +    + + +H  S+    +KD +    V+  R
Sbjct: 157 SDTHIDLTQSIGPGTLADTSHGSSSNPEVNKDDETENMVATGR 199

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458374|ref|XP_002283395.1| PREDICTED: uncharacterized protein LOC100252228 [Vitis vinifera]

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/127 (48%), Positives = 81/127 (63%), Gaps = 1/127 (0%)

Query: 4   ILTTIGPQIYLNCNVPDGVWYLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEF 63
           ++  + P  +    + D  WYL  S E+T    G W+ KGE  EIFSNS I GWRTT EF
Sbjct: 39  VMIEVNPYQHNPSCLSDRFWYLTSS-EDTKFAEGFWKPKGEPYEIFSNSSITGWRTTFEF 97

Query: 64  FEGQVPNERKTDWVMQEFRITQKRLYGDKKEEDSSSLCRVFLSGKQSPNHEMQQKLFSAN 123
           +EG  P+  KTDWV+Q+++ITQK    + K   SSSLCRVF S  QS +HEMQ++L  AN
Sbjct: 98  YEGTTPHVLKTDWVLQQYKITQKGQSKNIKPMASSSLCRVFQSRGQSSSHEMQKELGVAN 157

Query: 124 INNETHS 130
           + +E H+
Sbjct: 158 VADENHT 164

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142444|emb|CBI19647.3| unnamed protein product [Vitis vinifera]

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/127 (48%), Positives = 81/127 (63%), Gaps = 1/127 (0%)

Query: 4   ILTTIGPQIYLNCNVPDGVWYLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEF 63
           ++  + P  +    + D  WYL  S E+T    G W+ KGE  EIFSNS I GWRTT EF
Sbjct: 11  VMIEVNPYQHNPSCLSDRFWYLTSS-EDTKFAEGFWKPKGEPYEIFSNSSITGWRTTFEF 69

Query: 64  FEGQVPNERKTDWVMQEFRITQKRLYGDKKEEDSSSLCRVFLSGKQSPNHEMQQKLFSAN 123
           +EG  P+  KTDWV+Q+++ITQK    + K   SSSLCRVF S  QS +HEMQ++L  AN
Sbjct: 70  YEGTTPHVLKTDWVLQQYKITQKGQSKNIKPMASSSLCRVFQSRGQSSSHEMQKELGVAN 129

Query: 124 INNETHS 130
           + +E H+
Sbjct: 130 VADENHT 136

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302398995|gb|ADL36792.1| NAC domain class transcription factor [Malus x domestica]

 Score =  116 bits (290), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 81/135 (60%), Gaps = 8/135 (5%)

Query: 3   SILTTIGPQIYLNCNVPDGVWYLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLE 62
           +++  + P      N+PDG WY + S E+     GQWRAKGE   IFSNS I GWR TLE
Sbjct: 37  NVIRDVNPYRCAPSNLPDGFWYFIRSSESNPTNIGQWRAKGEASRIFSNSSIYGWRATLE 96

Query: 63  FFEGQVPNERKTDWVMQEFRITQKRLYGDKKE----EDSSSLCRVFLSGKQSPNHEMQQK 118
           F+ GQ P+E KT+WVMQE+ ITQK+     K     +D  SLCRVFL   ++PN    Q+
Sbjct: 97  FYRGQAPHETKTNWVMQEYWITQKKSSESSKLKINVQDVGSLCRVFLRDDETPNSNKLQE 156

Query: 119 LFSANINNETHSHST 133
           L    +N++   HST
Sbjct: 157 L----VNSDRAIHST 167

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449470009|ref|XP_004152711.1| PREDICTED: uncharacterized protein LOC101220327 [Cucumis sativus]

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 47/118 (39%), Positives = 73/118 (61%), Gaps = 4/118 (3%)

Query: 16  CN---VPDGVWYLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNER 72
           CN   +PDGVW+ V S  N  +    W+ K    ++FS+S   GWRTT E++EGQ P E 
Sbjct: 48  CNPKMLPDGVWFYVVSHGNADSSFSPWKLKSGAWKLFSDSSFTGWRTTYEYYEGQAPYEC 107

Query: 73  KTDWVMQEFRITQKRLYGDKKEEDSSSLCRVFLSGKQSPNHEMQQKL-FSANINNETH 129
           KT W+MQ++ ++Q  L  + K++++ SLC++FL  +Q  NHE   K+  S  +N+E +
Sbjct: 108 KTAWIMQKYWMSQTDLSENSKQKETISLCKIFLGDEQFQNHENTLKIDLSITLNSEPN 165

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|414864424|tpg|DAA42981.1| TPA: putative NAC domain transcription factor superfamily protein [Zea mays]

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 66/126 (52%), Gaps = 10/126 (7%)

Query: 28  SKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRITQKR 87
           S+ N + + G W+A G+  ++ S+   +G + TL ++ G+ P+  +TDWVM E+R+ ++ 
Sbjct: 78  SRTNRATKSGYWKATGKDRKVNSHRRAVGMKKTLVYYRGRAPHGSRTDWVMHEYRLDERE 137

Query: 88  LYGDKKEEDSSSLCRVFLSGKQSP---------NHEMQQKLFSANINN-ETHSHSTELSF 137
              D   +D+ +LCRVF      P         +H ++   + A   + + HS + +LS 
Sbjct: 138 CETDTGLQDAYALCRVFKKTAPGPKIIEHYGAVHHPIEHPQWMAEAGSVDRHSPTLDLSS 197

Query: 138 DKDKDD 143
           D   DD
Sbjct: 198 DARGDD 203

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357464263|ref|XP_003602413.1| NAC domain-containing protein [Medicago truncatula] gi|355491461|gb|AES72664.1| NAC domain-containing protein [Medicago truncatula]

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 9/100 (9%)

Query: 20  DGVWYLVCSKE---------NTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPN 70
           D  W+  C ++         N +  HG W+A G+  +I S + +IG + TL F+ G+ P 
Sbjct: 77  DPEWFFFCPQDRKYPNGHRLNRATNHGYWKATGKDRKIKSGTILIGMKKTLVFYSGRAPK 136

Query: 71  ERKTDWVMQEFRITQKRLYGDKKEEDSSSLCRVFLSGKQS 110
            ++T+WVM E+R T K L G    ++   LCR+F    +S
Sbjct: 137 GKRTNWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKNDES 176

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357464261|ref|XP_003602412.1| NAC domain-containing protein [Medicago truncatula] gi|355491460|gb|AES72663.1| NAC domain-containing protein [Medicago truncatula]

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 9/100 (9%)

Query: 20  DGVWYLVCSKE---------NTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPN 70
           D  W+  C ++         N +  HG W+A G+  +I S + +IG + TL F+ G+ P 
Sbjct: 77  DPEWFFFCPQDRKYPNGHRLNRATNHGYWKATGKDRKIKSGTILIGMKKTLVFYSGRAPK 136

Query: 71  ERKTDWVMQEFRITQKRLYGDKKEEDSSSLCRVFLSGKQS 110
            ++T+WVM E+R T K L G    ++   LCR+F    +S
Sbjct: 137 GKRTNWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKNDES 176

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	183
TAIR|locus:2075815	549	NAC053 "AT3G10500" [Arabidopsi	0.617	0.205	0.284	2.4e-11
TAIR|locus:2202028	395	NAC007 "NAC 007" [Arabidopsis	0.431	0.2	0.358	6.2e-11
TAIR|locus:2009729	631	NAC028 "NAC domain containing	0.601	0.174	0.313	6.2e-11
TAIR|locus:1009023241	279	AT3G12977 [Arabidopsis thalian	0.442	0.290	0.402	7.4e-11
TAIR|locus:2051053	268	NAC041 "NAC domain containing	0.617	0.421	0.291	1.4e-10
TAIR|locus:2061082	316	NAC038 "NAC domain containing	0.530	0.306	0.330	1.9e-10
TAIR|locus:2089764	246	NAC057 "NAC domain containing	0.557	0.414	0.303	2.7e-10
TAIR|locus:2128013	534	NTL9 "NAC transcription factor	0.765	0.262	0.272	4.4e-10
TAIR|locus:2016049	324	VND7 "vascular related NAC-dom	0.590	0.333	0.307	7.3e-10
UNIPROTKB|Q5Z6B6	276	NAC76 "NAC domain-containing p	0.431	0.286	0.385	7.5e-10

TAIR|locus:2075815 NAC053 "AT3G10500" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 2.4e-11, P = 2.4e-11
 Identities = 33/116 (28%), Positives = 59/116 (50%)

Query:    28 SKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRITQKR 87
             SK N + + G W+  G+  EI + S ++G + TL + +G+ P   +T+WVM E+R+  + 
Sbjct:    81 SKTNRATEMGYWKTTGKDREILNGSKVVGMKKTLVYHKGRAPRGERTNWVMHEYRLVDQD 140

Query:    88 LYGDKKEEDSSSLCRVFLSGKQSPNHEMQQKLFSANINNETHSHSTELSFDKDKDD 143
             L      +D+  LCR+F      P +  Q   + A    E      +++F  D++D
Sbjct:   141 LDKTGVHQDAFVLCRIFQKSGSGPKNGEQ---YGAPFVEEEWEEEDDMTFVPDQED 193

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009819 "drought recovery" evidence=IMP

GO:0010150 "leaf senescence" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IMP

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2202028 NAC007 "NAC 007" [Arabidopsis thaliana (taxid:3702)]

 Score = 139 (54.0 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
 Identities = 29/81 (35%), Positives = 46/81 (56%)

Query:    24 YLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRI 83
             Y   ++ N + + G W+A G    I+    +IG R TL F++G+ PN +K+DW+M E+R+
Sbjct:    76 YPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRL 135

Query:    84 TQKRLYGDKKEEDSSSLCRVF 104
                   G  +EE    +CRVF
Sbjct:   136 ETDE-NGTPQEE-GWVVCRVF 154

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0042546 "cell wall biogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2009729 NAC028 "NAC domain containing protein 28" [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 6.2e-11, P = 6.2e-11
 Identities = 36/115 (31%), Positives = 63/115 (54%)

Query:    28 SKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRITQKR 87
             S+ N + + G W+A G+  ++ S+S ++G + TL ++ G+ P+  +TDWVM E+R+ ++ 
Sbjct:    78 SRTNRATKAGYWKATGKDRKVTSHSRMVGTKKTLVYYRGRAPHGSRTDWVMHEYRLEEQE 137

Query:    88 LYGDKKEEDSSSLCRVF----LSGKQSPNHEMQQKLFSANINNETHSHSTELSFD 138
                    +D+ +LCRVF    L+ K    H   +K      N+E  + ST L  D
Sbjct:   138 CDSKSGIQDAYALCRVFKKSALANKIEEQHHGTKKN-KGTTNSEQSTSSTCLYSD 191

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:1009023241 AT3G12977 [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 33/82 (40%), Positives = 44/82 (53%)

Query:    24 YLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRI 83
             Y    + N +   G W+A G+   I  N  ++G R TL F+ G+ P  RKTDWVM EFR+
Sbjct:    84 YATGYRTNRATATGYWKATGKDRAIQRNGGLVGMRKTLVFYRGRSPKGRKTDWVMHEFRL 143

Query:    84 TQKRLYGDKKE-EDSSSLCRVF 104
               K L+      E+   LCRVF
Sbjct:   144 QGKLLHHSPNSLEEEWVLCRVF 165

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

TAIR|locus:2051053 NAC041 "NAC domain containing protein 41" [Arabidopsis thaliana (taxid:3702)]

 Score = 151 (58.2 bits), Expect = 1.4e-10, P = 1.4e-10
 Identities = 35/120 (29%), Positives = 63/120 (52%)

Query:    28 SKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRIT--- 84
             ++ N S   G W+A G   +I     ++G + TL F++G+ PN  +T+WV+ E+R+    
Sbjct:    82 NRSNRSTGSGYWKATGLDKQIGKKKLVVGMKKTLVFYKGKPPNGTRTNWVLHEYRLVDSQ 141

Query:    85 QKRLYGDKKEEDSSSLCRVFLSGKQSPNHEMQQKLFSANINNETHSHSTELSFDKDKDDT 144
             Q  LYG      +  LCRVFL  K+S ++  +++     + NE  + +     +++K  T
Sbjct:   142 QDSLYGQNM---NWVLCRVFLK-KRSNSNSKRKEDEKEEVENEKETETEREREEENKKST 197

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2061082 NAC038 "NAC domain containing protein 38" [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 1.9e-10, P = 1.9e-10
 Identities = 35/106 (33%), Positives = 58/106 (54%)

Query:    29 KENTSAQHGQWRAKGETCEIFSN--SYIIGWRTTLEFFEGQVPNERKTDWVMQEFRITQK 86
             + N +   G W+  G+  EIF++  S ++G + TL F+ G+ P   KT WVM E+R+  K
Sbjct:    87 RTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRAPRGEKTCWVMHEYRLHSK 146

Query:    87 RLYGDKKEEDSSSLCRVFLSGKQSPNHEMQQKLFSANINNETHSHS 132
               Y   K+ D   +CRVF   K++   E  +K  S + ++ +H H+
Sbjct:   147 SSYRTSKQ-DEWVVCRVF---KKT---EATKKYISTSSSSTSHHHN 185

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2089764 NAC057 "NAC domain containing protein 57" [Arabidopsis thaliana (taxid:3702)]

 Score = 147 (56.8 bits), Expect = 2.7e-10, P = 2.7e-10
 Identities = 31/102 (30%), Positives = 53/102 (51%)

Query:    29 KENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRITQKRL 88
             + N + + G W++ G+   + S S  IG + TL +++G+ P   +TDWVM E+R+  K  
Sbjct:    79 RTNRATRGGYWKSTGKDRRVTSQSRAIGMKKTLVYYKGRAPQGIRTDWVMHEYRLDDKDC 138

Query:    89 YGDKKEEDSSSLCRVFLSGKQSPNHEMQQKLFSANINNETHS 130
                   +DS +LCRVF         E +++L +   +  T S
Sbjct:   139 DDPSSLQDSYALCRVFKKNGICSELESERQLQTGQCSFTTAS 180

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2128013 NTL9 "NAC transcription factor-like 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 153 (58.9 bits), Expect = 4.4e-10, P = 4.4e-10
 Identities = 39/143 (27%), Positives = 65/143 (45%)

Query:     2 MSILTTIGPQIYLNCNVPDGVWYLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTL 61
             +S++ T  P+ +  C  P    Y    + N +   G W+A G+   I S   +IG + TL
Sbjct:    57 LSVIKTDDPEWFFFC--PRDRKYPNGHRSNRATDSGYWKATGKDRSIKSKKTLIGMKKTL 114

Query:    62 EFFEGQVPNERKTDWVMQEFRITQKRLYGDKKEEDSSSLCRVFLSGKQSPNH-EMQQKLF 120
              F+ G+ P   +T+W+M E+R T K L G    +    LCR+F       N  +  +  F
Sbjct:   115 VFYRGRAPKGERTNWIMHEYRPTLKDLDGTSPGQSPYVLCRLFHKPDDRVNGVKSDEAAF 174

Query:   121 SANINNETHSHSTELSFDKDKDD 143
             +A+        S++L  +    D
Sbjct:   175 TASNKYSPDDTSSDLVQETPSSD 197

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005516 "calmodulin binding" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0031347 "regulation of defense response" evidence=IMP

GO:0000956 "nuclear-transcribed mRNA catabolic process" evidence=RCA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

GO:0008284 "positive regulation of cell proliferation" evidence=RCA

TAIR|locus:2016049 VND7 "vascular related NAC-domain protein 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 147 (56.8 bits), Expect = 7.3e-10, P = 7.3e-10
 Identities = 35/114 (30%), Positives = 57/114 (50%)

Query:    24 YLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRI 83
             Y   ++ N +   G W+A G    + S + +IG R TL +++G+ PN RK+DW+M E+R+
Sbjct:    78 YPTGTRTNRATAAGFWKATGRDKAVLSKNSVIGMRKTLVYYKGRAPNGRKSDWIMHEYRL 137

Query:    84 TQKRLYGDKKEEDSSSLCRVFLSG--KQSP-NHE-MQQKLFSANINNETHSHST 133
                 L     +E+   +CR F      Q P  +E  Q +L+    +N   S  T
Sbjct:   138 QNSELA--PVQEEGWVVCRAFRKPIPNQRPLGYEPWQNQLYHVESSNNYSSSVT 189

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009735 "response to cytokinin stimulus" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009741 "response to brassinosteroid stimulus" evidence=IEP;RCA

GO:0010089 "xylem development" evidence=RCA;IMP;TAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0007155 "cell adhesion" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0042546 "cell wall biogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

UNIPROTKB|Q5Z6B6 NAC76 "NAC domain-containing protein 76" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 145 (56.1 bits), Expect = 7.5e-10, P = 7.5e-10
 Identities = 32/83 (38%), Positives = 49/83 (59%)

Query:    24 YLVCSKENTSAQHGQWRAKGETCEIF-SNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFR 82
             Y   ++ N +   G W+A G    IF +N+  IG R TL F+ G+ P+ +KTDW+M E+R
Sbjct:    79 YPTGTRTNRATTAGFWKATGRDKAIFLANACRIGMRKTLVFYVGRAPHGKKTDWIMHEYR 138

Query:    83 ITQKRLYGDKKEEDSSSLCRVFL 105
             + Q  +  D  +ED   +CRVF+
Sbjct:   139 LDQDNV--DV-QEDGWVVCRVFM 158

GO:0005634 "nucleus" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=ISS

GO:0048829 "root cap development" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	183
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	9e-12

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score = 59.1 bits (144), Expect = 9e-12
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 10/75 (13%)

Query: 20  DGVWYLVCSKE---------NTSAQHGQWRAKGETCEIFS-NSYIIGWRTTLEFFEGQVP 69
           D  WY    ++         N +   G W+A G+   + S    ++G + TL F++G+ P
Sbjct: 56  DREWYFFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGMKKTLVFYKGRAP 115

Query: 70  NERKTDWVMQEFRIT 84
              KTDWVM E+R+ 
Sbjct: 116 KGEKTDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	183
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	99.94

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=99.94  E-value=1.3e-27  Score=184.39  Aligned_cols=82  Identities=28%  Similarity=0.658  Sum_probs=70.8

Q ss_pred             CcceecCCCCCCCCCCC------CCeEEEeee---------ecCCcccCCceeeeCcceEEee-CCeeEEEEEEEEEeeC
Q 030079            3 SILTTIGPQIYLNCNVP------DGVWYLVCS---------KENTSAQHGQWRAKGETCEIFS-NSYIIGWRTTLEFFEG   66 (183)
Q Consensus         3 ~vI~evDvy~~dPwdLp------~~~wYFFs~---------R~~R~t~~G~Wk~~G~~k~I~~-~g~~VG~KktL~Fy~G   66 (183)
                      ++|.++|||.+|||+|+      +++||||++         |.+|++++|+||++|+.++|.+ ++.+||+|++|+||.|
T Consensus        32 ~~i~~~Diy~~~P~~L~~~~~~~~~~~yFF~~~~~~~~~~~r~~R~~~~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~  111 (129)
T PF02365_consen   32 DVIHDVDIYSAHPWELPAKFKGGDEEWYFFSPRKKKYPNGGRPNRVTGGGYWKSTGKEKPIKDPGGKVIGFKKTLVFYSG  111 (129)
T ss_dssp             CHSEE--GGGS-GGGCHHHSSS-SSEEEEEEE----------S-EEETTEEEEEECEEEEEEE-TTCEEEEEEEEEEEES
T ss_pred             cceeecccCccChHHhhhhccCCCceEEEEEecccccCCcccccccccceEEeecccccccccccceeeeeEEEEEEEec
Confidence            68999999999999998      679999999         3568899999999999999998 7899999999999999


Q ss_pred             cCCCCCccCeEEEeEEeC
Q 030079           67 QVPNERKTDWVMQEFRIT   84 (183)
Q Consensus        67 ~~p~g~kT~WvMhEY~l~   84 (183)
                      +.+++.+|+|+||||+|.
T Consensus       112 ~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen  112 KSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             STTS-EEEEEEEEEEEE-
T ss_pred             cCCCCCcCCeEEEEEEeC
Confidence            889999999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	183
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		1e-06
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		1e-06
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		1e-06

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 24  YLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRI 83
           Y   S+ N +A +G W+A G    +      +G +  L F+ G+ P   KTDW+M E+R+
Sbjct: 81  YPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRL 140

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 39/81 (48%)
Query: 24  YLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRI 83
           Y   S+ N  A  G W+A G    I +    +G +  L F+ G+ P   KT+W+M E+R+
Sbjct: 83  YPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRL 142
Query: 84  TQKRLYGDKKEEDSSSLCRVF 104
            +        + D   LCR++
Sbjct: 143 IEPSRRNGSTKLDDWVLCRIY 163

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 39/81 (48%)
Query: 24  YLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRI 83
           Y   S+ N  A  G W+A G    I +    +G +  L F+ G+ P   KT+W+M E+R+
Sbjct: 86  YPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRL 145
Query: 84  TQKRLYGDKKEEDSSSLCRVF 104
            +        + D   LCR++
Sbjct: 146 IEPSRRNGSTKLDDWVLCRIY 166

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	183
1ut7_A	171	No apical meristem protein; transcription regulati	1e-18
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	1e-16

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score = 77.7 bits (192), Expect = 1e-18
 Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 9/98 (9%)

Query: 16  CNVPDGVWYLVCSKE---------NTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEG 66
               +  WY    ++         N  A  G W+A G    I +    +G +  L F+ G
Sbjct: 66  ALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIG 125

Query: 67  QVPNERKTDWVMQEFRITQKRLYGDKKEEDSSSLCRVF 104
           + P   KT+W+M E+R+ +        + D   LCR++
Sbjct: 126 KAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIY 163

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score = 72.4 bits (178), Expect = 1e-16
 Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 14/103 (13%)

Query: 16  CNVPDGVWYLVCSKE---------NTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEG 66
                  WY    ++         N +A +G W+A G    +      +G +  L F+ G
Sbjct: 64  ALFGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAG 123

Query: 67  QVPNERKTDWVMQEFRITQKRLYGDKK-----EEDSSSLCRVF 104
           + P   KTDW+M E+R+                 D   LCR++
Sbjct: 124 KAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLY 166

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	183
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=1.1e-39  Score=264.98  Aligned_cols=107  Identities=24%  Similarity=0.559  Sum_probs=94.2

Q ss_pred             CCcceecCCCCCCCCCCC------CCeEEEeee---------ecCCcccCCceeeeCcceEEeeCCeeEEEEEEEEEeeC
Q 030079            2 MSILTTIGPQIYLNCNVP------DGVWYLVCS---------KENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEG   66 (183)
Q Consensus         2 ~~vI~evDvy~~dPwdLp------~~~wYFFs~---------R~~R~t~~G~Wk~~G~~k~I~~~g~~VG~KktL~Fy~G   66 (183)
                      .++|+|+|||.+|||+||      +++|||||+         |+||+|++||||++|++++|.++|.+||+||+|+||.|
T Consensus        44 ~~~I~evDvy~~~Pw~Lp~~~~~g~~ewYFFs~r~~ky~~g~R~nR~t~~G~WkatG~dk~I~~~g~~vG~KktLvFy~g  123 (174)
T 3ulx_A           44 VPIIAEVDLYKFDPWDLPERALFGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAG  123 (174)
T ss_dssp             SSCCEECCGGGSCGGGSGGGCSSCSSEEEEEEECCC-----CCSCEEETTEEEEECSCCEEECCSSSCCEEEEEEEEEES
T ss_pred             cCeeeecccccCCchhhhhhhccCCceEEEEeccccccCCCCCceeecCCceEccCCCCcEEeeCCcEEEEEEEEEEecC
Confidence            478999999999999999      578999998         46899999999999999999998999999999999999


Q ss_pred             cCCCCCccCeEEEeEEeCCccccC-----CCCCCCCeEEEEEEEcCC
Q 030079           67 QVPNERKTDWVMQEFRITQKRLYG-----DKKEEDSSSLCRVFLSGK  108 (183)
Q Consensus        67 ~~p~g~kT~WvMhEY~l~~~~~~~-----~~~~~~~~VLCrIy~K~~  108 (183)
                      ++|++.||+|+||||+|.+.....     .....++|||||||+|+.
T Consensus       124 ~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCrvf~K~~  170 (174)
T 3ulx_A          124 KAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKN  170 (174)
T ss_dssp             STTSCEEEEEEEEEEEECSCC-----------CCSSEEEEEEEESCC
T ss_pred             CCCCCCcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEEEEEcCC
Confidence            999999999999999999875432     123568999999999975

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=1.4e-39  Score=263.64  Aligned_cols=108  Identities=24%  Similarity=0.545  Sum_probs=92.2

Q ss_pred             CCcceecCCCCCCCCCCC------CCeEEEeee---------ecCCcccCCceeeeCcceEEeeCCeeEEEEEEEEEeeC
Q 030079            2 MSILTTIGPQIYLNCNVP------DGVWYLVCS---------KENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEG   66 (183)
Q Consensus         2 ~~vI~evDvy~~dPwdLp------~~~wYFFs~---------R~~R~t~~G~Wk~~G~~k~I~~~g~~VG~KktL~Fy~G   66 (183)
                      .++|+++|||.+|||+||      +++|||||+         |+||+|++||||++|++++|..++.+||+||+|+||.|
T Consensus        46 ~~~I~e~Diy~~~Pw~Lp~~~~~g~~ewyFFs~r~~k~~~g~R~~R~t~~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~g  125 (171)
T 1ut7_A           46 LQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIG  125 (171)
T ss_dssp             SCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-------CCEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEES
T ss_pred             CCeEeecccccCChhHhhchhhcCCccEEEEeccccccCCCCcccccCCCCEEeccCCCceEEecCcEEEEEEEEEEEcC
Confidence            478999999999999998      679999998         56899999999999999999999999999999999999


Q ss_pred             cCCCCCccCeEEEeEEeCCccccCCCCCCCCeEEEEEEEcCCC
Q 030079           67 QVPNERKTDWVMQEFRITQKRLYGDKKEEDSSSLCRVFLSGKQ  109 (183)
Q Consensus        67 ~~p~g~kT~WvMhEY~l~~~~~~~~~~~~~~~VLCrIy~K~~~  109 (183)
                      ++|++.||+|+||||+|............++|||||||+|+..
T Consensus       126 ~~p~g~kT~WvMhEY~l~~~~~~~~~~~~~~~VlCrv~~k~~~  168 (171)
T 1ut7_A          126 KAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSS  168 (171)
T ss_dssp             STTSCEEEEEEEEEEEECCCC--------CCEEEEEEEECC--
T ss_pred             cCCCCCcCCeEEEEEEcCCCccccCcccCCCEEEEEEEEcCCC
Confidence            9999999999999999998753222346789999999999864

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	183
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	1e-17

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 73.9 bits (181), Expect = 1e-17
 Identities = 25/90 (27%), Positives = 40/90 (44%)

Query: 15  NCNVPDGVWYLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKT 74
               P    Y   S+ N  A  G W+A G    I +    +G +  L F+ G+ P   KT
Sbjct: 74  YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKT 133

Query: 75  DWVMQEFRITQKRLYGDKKEEDSSSLCRVF 104
           +W+M E+R+ +        + D   LCR++
Sbjct: 134 NWIMHEYRLIEPSRRNGSTKLDDWVLCRIY 163

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	183
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.2e-37  Score=245.71  Aligned_cols=106  Identities=25%  Similarity=0.554  Sum_probs=91.3

Q ss_pred             CCcceecCCCCCCCCCCC------CCeEEEeee---------ecCCcccCCceeeeCcceEEeeCCeeEEEEEEEEEeeC
Q 030079            2 MSILTTIGPQIYLNCNVP------DGVWYLVCS---------KENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEG   66 (183)
Q Consensus         2 ~~vI~evDvy~~dPwdLp------~~~wYFFs~---------R~~R~t~~G~Wk~~G~~k~I~~~g~~VG~KktL~Fy~G   66 (183)
                      .++|+++|||.+|||+||      +++||||++         |.+|+|++|+||++|++++|.++|.+||+||+|+||+|
T Consensus        46 ~~~I~~~Dvy~~~Pw~Lp~~~~~~~~~wyFft~~~~k~~~g~r~~R~~g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~~  125 (166)
T d1ut7a_          46 LQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIG  125 (166)
T ss_dssp             SCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-------CCEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEES
T ss_pred             cccceeccCCcCChhhccchhccCcceEEEEeeeccccCCCCccccccCCCEecccCCCceEecCCcEEEEEEEEEEEec
Confidence            478999999999999998      678999998         45789999999999999999999999999999999999


Q ss_pred             cCCCCCccCeEEEeEEeCCccccCCCCCCCCeEEEEEEEcC
Q 030079           67 QVPNERKTDWVMQEFRITQKRLYGDKKEEDSSSLCRVFLSG  107 (183)
Q Consensus        67 ~~p~g~kT~WvMhEY~l~~~~~~~~~~~~~~~VLCrIy~K~  107 (183)
                      +.+++.+|+|+||||+|.+..........++|||||||+|+
T Consensus       126 ~~~~~~~t~W~M~EY~l~~~~~~~~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_         126 KAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             STTSCEEEEEEEEEEEECCCC--------CCEEEEEEEECC
T ss_pred             CCCCCCccCeEEEEEecCCcccccCccccCCEEEEEEEecC
Confidence            99999999999999999987554444567899999999985