Citrus Sinensis ID: 030085

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180---
Protein Sequence
MEHSSSSNSKQRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKHAGDALKNSASKL
Secondary Structure (PSIPRED)
ccccccccHHHHHHccccccccccccEEEEEEEccEEEEEEEEccccccccccccHHHHHHHHHHHHHHcccccccccEEEEEEEEcEEEEccccccEEEEEEEEEEEcccEEEEEEEEEEcccEEEcccccEEEccccccccccccccEEEEEEEEEEEccccccccccHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHHHcccHHHHHHccEEEEccccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEEEEcccccccccccEEEEEEEEEEEcccEEEEEEEEEEcccccEEEEEEEEEEEEEccccccccccEEEEEEEEEEEccccccHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mehssssnskqrkriavpdaplKAIGFEleeltperiIGCFrvtqnscqpfkvlHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVatpinlgkTIQVWQVRLWKVKevqsddgrdhdadhhhhnnstsssssiMISSSTVtllcnlpvpdhakhAGDALKNSASKL
Flexible Loop (DISEMBL)
mehssssnskqrkriavpdaplKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGrdhdadhhhhnnstsssssIMISSSTVTLLCNLPVPDHAKHAGDALKNSASKL
Low Complexity Region (SEG)
MEHSSSSNSKQRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQsddgrdhdadhhhhnnstsssssimisssTVTLLCNLPVPDHAKHAGDALKNSASKL
Disordered region (IsUnstruct)
*******************APLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVK*********************************VTLLCNLP*******************
Disordered Region (DISOPRED)
******************DAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDH***********************VTLLCN**************KNSA***
Disordered Region (DISEMBL)
**************IAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEV**************************ISSSTVTLLCNLPVPDHAKHAGDALKNSASKL
Disordered Region (DISPRO)
******SNSKQRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKHAGDALKNSASKL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEHSSSSNSKQRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKHAGDALKNSASKL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	183	2.2.26 [Sep-21-2011]
P14205	126	Putative esterase ComA2 O	yes	no	0.557	0.809	0.361	3e-12
P45083	138	Putative esterase HI_1161	yes	no	0.502	0.666	0.414	2e-11
Q9I3A4	145	Putative esterase PA1618	yes	no	0.546	0.689	0.348	3e-10
P77781	136	Esterase YdiI OS=Escheric	N/A	no	0.404	0.544	0.407	3e-10
Q9CMM9	139	Putative esterase PM0788	yes	no	0.415	0.546	0.410	4e-08
C9XXI1	137	Proofreading thioesterase	no	no	0.519	0.693	0.309	1e-07
Q9KM09	150	Putative esterase VC_A058	yes	no	0.513	0.626	0.323	1e-07
B5BCV2	137	Proofreading thioesterase	no	no	0.387	0.518	0.397	3e-07
A9MVB6	137	Proofreading thioesterase	no	no	0.387	0.518	0.397	3e-07
A9ML30	138	Proofreading thioesterase	N/A	no	0.387	0.514	0.397	3e-07

>sp|P14205|COMA2_BACSU Putative esterase ComA2 OS=Bacillus subtilis (strain 168) GN=yuxO PE=3 SV=2

 Score = 71.2 bits (173), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 3/105 (2%)

Query: 22  LKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAH--MASGFKR 79
           L+A+G E+ E T ER +    V   + QPF  LHGG S  +AE+ AS GA   +    + 
Sbjct: 8   LEALGIEIVENTAERCVAVMPVDHRTVQPFGYLHGGASVALAETAASAGAQNLIDHTTQA 67

Query: 80  VAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKE 124
             G+++  NHLKS + G  V+A+A P+++G+T  V+ + ++  +E
Sbjct: 68  CVGLEINANHLKSVKEGT-VKAIAEPVHIGRTTIVYHIHIYDEQE 111

Is not required for competence.
Bacillus subtilis (strain 168) (taxid: 224308)
EC: 3EC: .EC: 1EC: .EC: 2EC: .EC: -

>sp|P45083|Y1161_HAEIN Putative esterase HI_1161 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1161 PE=1 SV=1

 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 2/94 (2%)

Query: 25  IGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASM-GAHMASGFKRVAGV 83
           +G E+     + I     V   + QPF VLHGGVS  +AE++ S+ G+      K V G+
Sbjct: 24  LGIEISAFGEDWIEATMPVDHRTMQPFGVLHGGVSVALAETIGSLAGSLCLEEGKTVVGL 83

Query: 84  QLTINHLKSAELGDLVRAVATPINLGKTIQVWQV 117
            +  NHL+    G  V A ATPINLG+ IQVWQ+
Sbjct: 84  DINANHLRPVRSGK-VTARATPINLGRNIQVWQI 116

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: -

>sp|Q9I3A4|Y1618_PSEAE Putative esterase PA1618 OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA1618 PE=3 SV=1

 Score = 64.7 bits (156), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 9/109 (8%)

Query: 25  IGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMA--SGFKRVAG 82
           +G   E    E +     V   + QPF +LHGG S ++AESL SM +++   +      G
Sbjct: 25  LGIRFEAFDDESLTASMPVDSRTHQPFGLLHGGASVVLAESLGSMASYLCVDTSQYYCVG 84

Query: 83  VQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGR 131
           +++  NHL+    G  V AVA  I+LG+T  VW +RL        DDG+
Sbjct: 85  LEVNANHLRGLRSGR-VTAVARAIHLGRTTHVWDIRL------SGDDGK 126

Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: -

>sp|P77781|YDII_ECOLI Esterase YdiI OS=Escherichia coli (strain K12) GN=ydiI PE=1 SV=1

 Score = 64.7 bits (156), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 51/76 (67%), Gaps = 2/76 (2%)

Query: 49  QPFKVLHGGVSALIAESLASMGAHMAS-GFKRVAGVQLTINHLKSAELGDLVRAVATPIN 107
           QPF +LHGG S ++AES+ S+  ++ + G ++V G+++  NH++SA  G  VR V  P++
Sbjct: 48  QPFGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREGR-VRGVCKPLH 106

Query: 108 LGKTIQVWQVRLWKVK 123
           LG   QVWQ+ ++  K
Sbjct: 107 LGSRHQVWQIEIFDEK 122

Displays esterase activity toward palmitoyl-CoA and pNP-butyrate.

Escherichia coli (strain K12) (taxid: 83333)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q9CMM9|Y788_PASMU Putative esterase PM0788 OS=Pasteurella multocida (strain Pm70) GN=PM0788 PE=3 SV=1

 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 2/78 (2%)

Query: 43  VTQNSCQPFKVLHGGVSALIAESLASM-GAHMASGFKRVAGVQLTINHLKSAELGDLVRA 101
           V Q + QP   LHGG+S  +AE++ SM G    +  + V G+++  NHL+  + G +V A
Sbjct: 42  VDQRTIQPMGFLHGGLSVALAETIGSMAGFCCITENQFVLGLEINANHLRPVKQG-IVTA 100

Query: 102 VATPINLGKTIQVWQVRL 119
            ATPI+LG   QVWQ+ +
Sbjct: 101 RATPIHLGTRTQVWQIEI 118

Pasteurella multocida (strain Pm70) (taxid: 272843)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: -

>sp|C9XXI1|ENTH_CROTZ Proofreading thioesterase EntH OS=Cronobacter turicensis (strain DSM 18703 / LMG 23827 / z3032) GN=entH PE=3 SV=1

 Score = 56.2 bits (134), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 2/97 (2%)

Query: 25  IGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS-GFKRVAGV 83
           +G E   L  + +     V   + QPF +LHGG SA +AE+L SM  ++ +   + V G 
Sbjct: 24  LGIEYTRLGDDLLEATMPVDTRTHQPFGLLHGGASAALAETLGSMAGYLTTRDGQCVVGT 83

Query: 84  QLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW 120
           +++ +H ++   G  VR V  P++LG+  Q W++ ++
Sbjct: 84  EISASHHRAVSQGQ-VRGVCQPLHLGRQSQCWEIVIY 119

Required for optimal enterobactin synthesis. Acts as a proofreading enzyme that prevents EntB misacylation by hydrolyzing the thioester bound existing between EntB and wrongly charged molecules.

Cronobacter turicensis (strain DSM 18703 / LMG 23827 / z3032) (taxid: 693216)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: -

>sp|Q9KM09|Y3380_VIBCH Putative esterase VC_A0580 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=VC_A0580 PE=3 SV=2

 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 8/102 (7%)

Query: 31  ELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGF-KRVAGVQLTINH 89
           E+T   I     V   + QP  +LHGG S ++AE+L S+ A+ + G      G+ +  NH
Sbjct: 31  EVTENSISATMPVCHFTHQPLGMLHGGASVVLAETLGSVAANFSVGEDAYCVGLDINANH 90

Query: 90  LKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGR 131
           +++   G LV   A P+++G + QVWQ+      E++ + GR
Sbjct: 91  VRAMREG-LVTGTAVPLHIGVSTQVWQI------EIKDEQGR 125

Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: -

>sp|B5BCV2|ENTH_SALPK Proofreading thioesterase EntH OS=Salmonella paratyphi A (strain AKU_12601) GN=entH PE=3 SV=1

 Score = 55.1 bits (131), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 49  QPFKVLHGGVSALIAESLASMGAH-MASGFKRVAGVQLTINHLKSAELGDLVRAVATPIN 107
           QPF +LHGG SA +AE+L SM  + M    + V G +L   H ++   G  VR V  P++
Sbjct: 48  QPFGLLHGGASAALAETLGSMAGYLMTRDGQCVVGTELNATHHRAVSQGK-VRGVCLPLH 106

Query: 108 LGKTIQVWQVRLW 120
           LG+  Q W++ L+
Sbjct: 107 LGRQNQSWEITLF 119

Required for optimal enterobactin synthesis. Acts as a proofreading enzyme that prevents EntB misacylation by hydrolyzing the thioester bound existing between EntB and wrongly charged molecules.

Salmonella paratyphi A (strain AKU_12601) (taxid: 554290)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: -

>sp|A9MVB6|ENTH_SALPB Proofreading thioesterase EntH OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=entH PE=3 SV=1

 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 49  QPFKVLHGGVSALIAESLASMGAH-MASGFKRVAGVQLTINHLKSAELGDLVRAVATPIN 107
           QPF +LHGG SA +AE+L SM  + M    + V G +L   H ++   G  VR V  P++
Sbjct: 48  QPFGLLHGGASAALAETLGSMAGYLMTRDGQCVVGTELNATHHRAVSQGK-VRGVCLPLH 106

Query: 108 LGKTIQVWQVRLW 120
           LG+  Q W++ L+
Sbjct: 107 LGRQNQSWEITLF 119

Required for optimal enterobactin synthesis. Acts as a proofreading enzyme that prevents EntB misacylation by hydrolyzing the thioester bound existing between EntB and wrongly charged molecules.

Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) (taxid: 1016998)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: -

>sp|A9ML30|ENTH_SALAR Proofreading thioesterase EntH OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=entH PE=3 SV=1

 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 49  QPFKVLHGGVSALIAESLASMGAH-MASGFKRVAGVQLTINHLKSAELGDLVRAVATPIN 107
           QPF +LHGG SA +AE+L SM  + M    + V G +L   H ++   G  VR V  P++
Sbjct: 49  QPFGLLHGGASAALAETLGSMAGYLMTRDGQCVVGTELNATHHRAVSQGK-VRGVCQPLH 107

Query: 108 LGKTIQVWQVRLW 120
           LG+  Q W++ L+
Sbjct: 108 LGRQNQSWEITLF 120

Required for optimal enterobactin synthesis. Acts as a proofreading enzyme that prevents EntB misacylation by hydrolyzing the thioester bound existing between EntB and wrongly charged molecules.

Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) (taxid: 41514)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	183
388502438	163	unknown [Lotus japonicus]	0.879	0.987	0.566	9e-50
351726265	183	uncharacterized protein LOC100527403 [Gl	0.836	0.836	0.587	1e-49
356531756	158	PREDICTED: putative esterase HI_1161-lik	0.781	0.905	0.598	2e-49
351722108	158	uncharacterized protein LOC100527631 [Gl	0.781	0.905	0.592	3e-49
15221148	156	thioesterase-like protein [Arabidopsis t	0.830	0.974	0.587	2e-47
225432206	172	PREDICTED: putative esterase HI_1161 iso	0.808	0.860	0.556	1e-46
297852450	156	thioesterase family protein [Arabidopsis	0.765	0.897	0.591	2e-46
223948913	177	unknown [Zea mays] gi|413933395|gb|AFW67	0.890	0.920	0.505	9e-45
357450257	161	Esterase ydiI [Medicago truncatula] gi|3	0.868	0.987	0.522	2e-44
255556618	158	acyl-CoA thioesterase, putative [Ricinus	0.852	0.987	0.538	3e-44

>gi|388502438|gb|AFK39285.1| unknown [Lotus japonicus]

 Score =  201 bits (512), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 102/180 (56%), Positives = 126/180 (70%), Gaps = 19/180 (10%)

Query: 1   MEHSSSSNSKQRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSA 60
           ME   SS+S    + A  D PL AIGFE+EEL+P+R+ G   +T   CQPFKVLHGGVSA
Sbjct: 1   MEDKPSSSSLATSKTAALDTPLHAIGFEIEELSPQRVTGRLPITLKCCQPFKVLHGGVSA 60

Query: 61  LIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW 120
           +IAESLASMGAHMASG++RVAG+QL+INHLK AELGDLV A AT +N+GKT+QVW+V +W
Sbjct: 61  MIAESLASMGAHMASGYQRVAGIQLSINHLKRAELGDLVHAEATSLNVGKTVQVWEVTIW 120

Query: 121 KVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKHAGDALKNSA 180
           K+             D  +  N +      ++SSS VTL+CN+PVPDHAK AG  LK  A
Sbjct: 121 KI-------------DPSNLQNRS------LVSSSRVTLICNMPVPDHAKEAGQLLKKYA 161

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726265|ref|NP_001235585.1| uncharacterized protein LOC100527403 [Glycine max] gi|255632270|gb|ACU16493.1| unknown [Glycine max]

 Score =  201 bits (510), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 101/172 (58%), Positives = 125/172 (72%), Gaps = 19/172 (11%)

Query: 12  RKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGA 71
           + + A  D  L +IGFE+E+L+P++I G   VTQ  CQPFKVLHGGVSALIAESLASMGA
Sbjct: 9   KSKTAALDQTLHSIGFEIEDLSPQKISGRLPVTQKCCQPFKVLHGGVSALIAESLASMGA 68

Query: 72  HMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGR 131
           HMASG+KRVAG+QL+INHLK AE+GDLV A ATP+N+GKTIQVW+VRLWK+         
Sbjct: 69  HMASGYKRVAGIQLSINHLKRAEIGDLVYAEATPLNVGKTIQVWEVRLWKI--------- 119

Query: 132 DHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKHAGDALKNSASKL 183
                     ++++S +  ++SSS VTLL N+PVPDHAK A   LKN A  L
Sbjct: 120 ----------DASNSQNRSLVSSSRVTLLSNMPVPDHAKDAAKPLKNFAKLL 161

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531756|ref|XP_003534442.1| PREDICTED: putative esterase HI_1161-like [Glycine max]

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 97/162 (59%), Positives = 123/162 (75%), Gaps = 19/162 (11%)

Query: 19  DAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFK 78
           DAPL++IGFE+++L+P+R+ G   +TQ  CQPFKVLHGGVSAL+AESLAS+GAHMASG++
Sbjct: 14  DAPLQSIGFEIQDLSPQRVSGHLTITQKCCQPFKVLHGGVSALVAESLASIGAHMASGYQ 73

Query: 79  RVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHH 138
           RVAG+QL+INHLKSA LGDLV A ATP+N+GKTIQVW+VRLWK+                
Sbjct: 74  RVAGIQLSINHLKSAVLGDLVFAEATPLNVGKTIQVWEVRLWKL---------------- 117

Query: 139 HHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKHAGDALKNSA 180
              + ++     +ISSS VTLLCN+PVPD+AK AGD L+  A
Sbjct: 118 ---DPSNKQKKTLISSSRVTLLCNMPVPDNAKDAGDKLRKHA 156

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351722108|ref|NP_001235185.1| uncharacterized protein LOC100527631 [Glycine max] gi|255632814|gb|ACU16760.1| unknown [Glycine max]

 Score =  199 bits (507), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 96/162 (59%), Positives = 122/162 (75%), Gaps = 19/162 (11%)

Query: 19  DAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFK 78
           DAPL++IGFE++EL+P+R+ G   VTQ  CQPFKVLHGGVSAL+AESLAS+GAHMASG++
Sbjct: 14  DAPLQSIGFEIQELSPQRVSGHLPVTQKCCQPFKVLHGGVSALVAESLASIGAHMASGYQ 73

Query: 79  RVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHH 138
           RVAG+QL+INHLKSA LGDLV A A P+N+GKTIQVW+VR+WK+                
Sbjct: 74  RVAGIQLSINHLKSAVLGDLVYAEAIPLNVGKTIQVWEVRIWKL---------------- 117

Query: 139 HHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKHAGDALKNSA 180
              + ++     ++SSS VTLLCN+PVPD+AK AGD L+  A
Sbjct: 118 ---DPSNKQKKTLVSSSRVTLLCNMPVPDNAKDAGDKLRKHA 156

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15221148|ref|NP_175266.1| thioesterase-like protein [Arabidopsis thaliana] gi|5733877|gb|AAD49765.1|AC007932_13 F11A17.13 [Arabidopsis thaliana] gi|33589776|gb|AAQ22654.1| At1g48320 [Arabidopsis thaliana] gi|110738947|dbj|BAF01394.1| F11A17.13 [Arabidopsis thaliana] gi|332194153|gb|AEE32274.1| thioesterase-like protein [Arabidopsis thaliana]

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 104/177 (58%), Positives = 124/177 (70%), Gaps = 25/177 (14%)

Query: 4   SSSSNSKQRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIA 63
           S+SSN+K        D PL  +GFE +EL+P RI G   V+   CQPFKVLHGGVSALIA
Sbjct: 3   SASSNTKAI------DPPLHMLGFEFDELSPTRITGRLPVSPVCCQPFKVLHGGVSALIA 56

Query: 64  ESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVK 123
           ESLASMGAHMASGFKRVAG+QL+INHLKSA+LGDLV A ATP++ GKTIQVW+V+LWK  
Sbjct: 57  ESLASMGAHMASGFKRVAGIQLSINHLKSADLGDLVFAEATPVSTGKTIQVWEVKLWKT- 115

Query: 124 EVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKHAGDALKNSA 180
             Q D                  ++ I+ISSS VTL+CNLP+PD+AK A + LK  A
Sbjct: 116 -TQKD-----------------KANKILISSSRVTLICNLPIPDNAKDAANMLKMVA 154

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432206|ref|XP_002269958.1| PREDICTED: putative esterase HI_1161 isoform 1 [Vitis vinifera]

 Score =  191 bits (484), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 93/167 (55%), Positives = 122/167 (73%), Gaps = 19/167 (11%)

Query: 14  RIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHM 73
           + A+ DAP+ A+GF+LEE++P ++ G   VT  +CQPFKVLHGGVSALIAE+LAS+GAHM
Sbjct: 23  KTAILDAPIHAMGFQLEEISPTKVSGRLPVTSKACQPFKVLHGGVSALIAEALASIGAHM 82

Query: 74  ASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDH 133
           ASG++RVAG+ L+INHLK A+LGDLV A ATP+N+G TIQVW V+LWK+           
Sbjct: 83  ASGYRRVAGIHLSINHLKRADLGDLVYAEATPVNIGNTIQVWGVQLWKI----------- 131

Query: 134 DADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKHAGDALKNSA 180
                   + ++S    +ISSS VTL+CN+PVP+HAK AG+ LK  A
Sbjct: 132 --------DPSNSEIKTLISSSRVTLVCNMPVPEHAKAAGEILKKFA 170

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297852450|ref|XP_002894106.1| thioesterase family protein [Arabidopsis lyrata subsp. lyrata] gi|297339948|gb|EFH70365.1| thioesterase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  190 bits (483), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 94/159 (59%), Positives = 114/159 (71%), Gaps = 19/159 (11%)

Query: 19  DAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFK 78
           D PL  +GFE +EL+P R+ G   V+   CQPFKVLHGGVSALIAESLAS GAHMASGFK
Sbjct: 12  DPPLHMLGFEFDELSPTRVTGRLPVSPTCCQPFKVLHGGVSALIAESLASTGAHMASGFK 71

Query: 79  RVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHH 138
           RVAG+QL+INHLKSA+LGDLV A ATP++ GKTIQVW+V+LWK  E              
Sbjct: 72  RVAGIQLSINHLKSADLGDLVFAEATPVSTGKTIQVWEVKLWKTTE-------------- 117

Query: 139 HHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKHAGDALK 177
                   ++ I+ISSS VTL+CNLP+PD+AK A + L+
Sbjct: 118 -----KDKANKILISSSRVTLICNLPIPDNAKDAANMLR 151

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|223948913|gb|ACN28540.1| unknown [Zea mays] gi|413933395|gb|AFW67946.1| hypothetical protein ZEAMMB73_585158 [Zea mays]

 Score =  184 bits (468), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 92/182 (50%), Positives = 124/182 (68%), Gaps = 19/182 (10%)

Query: 2   EHSSSSNSKQRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSAL 61
           + +S + +  R  +A  DAPL A+GFE+EEL+P R+ G   +T   CQPFKVLHGGVSAL
Sbjct: 15  QPASPAAADSRAMMAELDAPLHALGFEMEELSPSRLTGRLPITPICCQPFKVLHGGVSAL 74

Query: 62  IAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWK 121
           +AE+LASMGAHMASG++RVAGVQL+INH +SA LGD V A A P+++G++ QVW+V+LWK
Sbjct: 75  VAEALASMGAHMASGYRRVAGVQLSINHFRSAALGDTVLAQAVPVHVGRSTQVWEVKLWK 134

Query: 122 VKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKHAGDALKNSAS 181
           +                   + ++ +    I+ S VTLL NLP+P+  K AGDALK  +S
Sbjct: 135 M-------------------DPSTGAKGPQIAESRVTLLSNLPLPEEHKRAGDALKKYSS 175

Query: 182 KL 183
           KL
Sbjct: 176 KL 177

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357450257|ref|XP_003595405.1| Esterase ydiI [Medicago truncatula] gi|355484453|gb|AES65656.1| Esterase ydiI [Medicago truncatula] gi|388508678|gb|AFK42405.1| unknown [Medicago truncatula]

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 94/180 (52%), Positives = 125/180 (69%), Gaps = 21/180 (11%)

Query: 1   MEHSSSSNSKQRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSA 60
           MEH SSS+ K +   A  DAPL  IGFE E+L+ +++ G   +TQ  CQPFKVLHGGVSA
Sbjct: 1   MEHKSSSSGKPKA--AELDAPLHTIGFEFEDLSAQKVSGNLHLTQKCCQPFKVLHGGVSA 58

Query: 61  LIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW 120
           +I+ESLAS+GAH+A G+KRVAG+QL+INHLK+A +GD + A ATP+ +GK+IQVW VRLW
Sbjct: 59  MISESLASIGAHIACGYKRVAGIQLSINHLKAAVIGDFIHAEATPLIVGKSIQVWDVRLW 118

Query: 121 KVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKHAGDALKNSA 180
           K+                   + ++S +  +I++S VTL  N+PVPD+AK AGD LK  A
Sbjct: 119 KI-------------------DPSNSQNRTLIATSRVTLKSNMPVPDNAKDAGDKLKKHA 159

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255556618|ref|XP_002519343.1| acyl-CoA thioesterase, putative [Ricinus communis] gi|223541658|gb|EEF43207.1| acyl-CoA thioesterase, putative [Ricinus communis]

 Score =  183 bits (464), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 97/180 (53%), Positives = 123/180 (68%), Gaps = 24/180 (13%)

Query: 1   MEHSSSSNSKQRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSA 60
           ME SSS       + A  D+ L A+GFE+++L+P ++ G   V+    QPFKVLHGGVSA
Sbjct: 1   MEQSSS-------KTANLDSLLHAVGFEIQDLSPHKVTGRLFVSDKCVQPFKVLHGGVSA 53

Query: 61  LIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW 120
           LI+E+LASMGAH+ASGF+RVAG+ LTI+HLK AELGDLV A A P+NLGKTIQVW+V+LW
Sbjct: 54  LISEALASMGAHIASGFQRVAGIHLTISHLKRAELGDLVFAEAVPLNLGKTIQVWEVQLW 113

Query: 121 KVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKHAGDALKNSA 180
           KV                   ++T   S  ++SSS VTLLCN+PVP++AK A D LK  A
Sbjct: 114 KVDP-----------------SNTQGQSKSLVSSSRVTLLCNMPVPEYAKDAADNLKKYA 156

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	183
TAIR|locus:2007735	156	DHNAT1 "DHNA-CoA thioesterase	0.628	0.737	0.685	2.9e-44
TAIR|locus:2154354	157	DHNAT2 "DHNA-CoA thioesterase	0.590	0.687	0.592	6.5e-39
UNIPROTKB|Q81XT2	127	BAS4785 "ComA operon protein,	0.530	0.763	0.35	2.1e-13
TIGR_CMR|BA_5148	127	BA_5148 "comA operon protein,	0.530	0.763	0.35	2.1e-13
UNIPROTKB|P77781	136	ydiI "esterase" [Escherichia c	0.535	0.720	0.339	1.9e-12
UNIPROTKB|Q83D31	157	CBU_0913 "Thioesterase" [Coxie	0.540	0.630	0.294	4.1e-10
TIGR_CMR|CBU_0913	157	CBU_0913 "conserved hypothetic	0.540	0.630	0.294	4.1e-10
UNIPROTKB|Q4KFW2	147	ydiI "Esterase YdiI" [Pseudomo	0.519	0.646	0.32	5.2e-10
UNIPROTKB|Q9KM09	150	VC_A0580 "Putative esterase VC	0.480	0.586	0.333	1.8e-09
TIGR_CMR|VC_A0580	150	VC_A0580 "conserved hypothetic	0.480	0.586	0.333	1.8e-09

TAIR|locus:2007735 DHNAT1 "DHNA-CoA thioesterase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 404 (147.3 bits), Expect = 2.9e-44, Sum P(2) = 2.9e-44
 Identities = 83/121 (68%), Positives = 98/121 (80%)

Query:     4 SSSSNSKQRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIA 63
             S+SSN+K     A+ D PL  +GFE +EL+P RI G   V+   CQPFKVLHGGVSALIA
Sbjct:     3 SASSNTK-----AI-DPPLHMLGFEFDELSPTRITGRLPVSPVCCQPFKVLHGGVSALIA 56

Query:    64 ESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVK 123
             ESLASMGAHMASGFKRVAG+QL+INHLKSA+LGDLV A ATP++ GKTIQVW+V+LWK  
Sbjct:    57 ESLASMGAHMASGFKRVAGIQLSINHLKSADLGDLVFAEATPVSTGKTIQVWEVKLWKTT 116

Query:   124 E 124
             +
Sbjct:   117 Q 117

GO:0009507 "chloroplast" evidence=ISM

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=ISS

GO:0047617 "acyl-CoA hydrolase activity" evidence=ISS

GO:0005777 "peroxisome" evidence=IDA

GO:0042372 "phylloquinone biosynthetic process" evidence=IMP

TAIR|locus:2154354 DHNAT2 "DHNA-CoA thioesterase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 345 (126.5 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
 Identities = 64/108 (59%), Positives = 86/108 (79%)

Query:    19 DAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFK 78
             D PLK +GF  +EL+  R+ G   +T+  CQPFKVLHGGVSALIAE+LAS+GA +ASGFK
Sbjct:    11 DQPLKILGFVFDELSATRVSGHLTLTEKCCQPFKVLHGGVSALIAEALASLGAGIASGFK 70

Query:    79 RVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQ 126
             RVAG+ L+I+HL+ A LG++V A + P+++GK IQVW+VRLWK K+ +
Sbjct:    71 RVAGIHLSIHHLRPAALGEIVFAESFPVSVGKNIQVWEVRLWKAKKTE 118

GO:0009507 "chloroplast" evidence=ISM

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=ISS

GO:0047617 "acyl-CoA hydrolase activity" evidence=ISS

GO:0005777 "peroxisome" evidence=IDA

GO:0042372 "phylloquinone biosynthetic process" evidence=IMP

UNIPROTKB|Q81XT2 BAS4785 "ComA operon protein, putative" [Bacillus anthracis (taxid:1392)]

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 35/100 (35%), Positives = 64/100 (64%)

Query:    22 LKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAH-MASGFKRV 80
             + ++G EL E+T ++++    V + + QPF  LHGG S  +AE++AS+G++ +    K +
Sbjct:     6 MDSLGIELLEMTEDKVVATMPVDERTHQPFGFLHGGASLALAETVASVGSYNLIDQEKCI 65

Query:    81 A-GVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRL 119
               G+++  NH++S + G +V A+ TPI+ G +  VW VR+
Sbjct:    66 CFGLEINANHIRSKKDG-MVTAIGTPIHRGHSTMVWDVRI 104

GO:0003674 "molecular_function" evidence=ND

TIGR_CMR|BA_5148 BA_5148 "comA operon protein, putative" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 35/100 (35%), Positives = 64/100 (64%)

Query:    22 LKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAH-MASGFKRV 80
             + ++G EL E+T ++++    V + + QPF  LHGG S  +AE++AS+G++ +    K +
Sbjct:     6 MDSLGIELLEMTEDKVVATMPVDERTHQPFGFLHGGASLALAETVASVGSYNLIDQEKCI 65

Query:    81 A-GVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRL 119
               G+++  NH++S + G +V A+ TPI+ G +  VW VR+
Sbjct:    66 CFGLEINANHIRSKKDG-MVTAIGTPIHRGHSTMVWDVRI 104

GO:0003674 "molecular_function" evidence=ND

GO:0009294 "DNA mediated transformation" evidence=ISS

UNIPROTKB|P77781 ydiI "esterase" [Escherichia coli K-12 (taxid:83333)]

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 35/103 (33%), Positives = 60/103 (58%)

Query:    25 IGF---ELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS-GFKRV 80
             +GF     E +  + +     V   + QPF +LHGG S ++AES+ S+  ++ + G ++V
Sbjct:    21 VGFLDIRFEHIGDDTLEATMPVDSRTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKV 80

Query:    81 AGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVK 123
              G+++  NH++SA  G  VR V  P++LG   QVWQ+ ++  K
Sbjct:    81 VGLEINANHVRSAREGR-VRGVCKPLHLGSRHQVWQIEIFDEK 122

GO:0016787 "hydrolase activity" evidence=IEA;IDA

UNIPROTKB|Q83D31 CBU_0913 "Thioesterase" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 30/102 (29%), Positives = 55/102 (53%)

Query:    25 IGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRV--AG 82
             +G E  E+    + G   V   + QP  ++HGG S ++AE+L S+ A+       +   G
Sbjct:    36 LGIEFTEVGKNYLRGRMPVDHRTHQPIGLMHGGASCVLAETLGSVAANFCVDSNELYCVG 95

Query:    83 VQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKE 124
             + +  NH++SA  G ++   A P ++GK+ QVW + ++  K+
Sbjct:    96 LDINTNHVRSARSGFVI-GTAKPFHIGKSTQVWGIEIFDEKD 136

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CBU_0913 CBU_0913 "conserved hypothetical protein" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 30/102 (29%), Positives = 55/102 (53%)

Query:    25 IGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRV--AG 82
             +G E  E+    + G   V   + QP  ++HGG S ++AE+L S+ A+       +   G
Sbjct:    36 LGIEFTEVGKNYLRGRMPVDHRTHQPIGLMHGGASCVLAETLGSVAANFCVDSNELYCVG 95

Query:    83 VQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKE 124
             + +  NH++SA  G ++   A P ++GK+ QVW + ++  K+
Sbjct:    96 LDINTNHVRSARSGFVI-GTAKPFHIGKSTQVWGIEIFDEKD 136

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q4KFW2 ydiI "Esterase YdiI" [Pseudomonas protegens Pf-5 (taxid:220664)]

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 32/100 (32%), Positives = 55/100 (55%)

Query:    23 KAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHM---ASGFKR 79
             + +    E    + +     +   + QP+ +LHGG S ++AE++ SM +++   AS F  
Sbjct:    23 EVLDIRFESYDEQSLTASMVIDHRTHQPYGLLHGGASVVLAETVGSMASYLCIDASKFYC 82

Query:    80 VAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRL 119
             V G+++  NHL+    G  V AVA  I++G+T  VW +RL
Sbjct:    83 V-GLEINANHLRGLRTGR-VTAVAKAIHIGRTTHVWDIRL 120

GO:0016787 "hydrolase activity" evidence=ISS

UNIPROTKB|Q9KM09 VC_A0580 "Putative esterase VC_A0580" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 30/90 (33%), Positives = 50/90 (55%)

Query:    31 ELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVA-GVQLTINH 89
             E+T   I     V   + QP  +LHGG S ++AE+L S+ A+ + G      G+ +  NH
Sbjct:    31 EVTENSISATMPVCHFTHQPLGMLHGGASVVLAETLGSVAANFSVGEDAYCVGLDINANH 90

Query:    90 LKSAELGDLVRAVATPINLGKTIQVWQVRL 119
             +++   G LV   A P+++G + QVWQ+ +
Sbjct:    91 VRAMREG-LVTGTAVPLHIGVSTQVWQIEI 119

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|VC_A0580 VC_A0580 "conserved hypothetical protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 30/90 (33%), Positives = 50/90 (55%)

Query:    31 ELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVA-GVQLTINH 89
             E+T   I     V   + QP  +LHGG S ++AE+L S+ A+ + G      G+ +  NH
Sbjct:    31 EVTENSISATMPVCHFTHQPLGMLHGGASVVLAETLGSVAANFSVGEDAYCVGLDINANH 90

Query:    90 LKSAELGDLVRAVATPINLGKTIQVWQVRL 119
             +++   G LV   A P+++G + QVWQ+ +
Sbjct:    91 VRAMREG-LVTGTAVPLHIGVSTQVWQIEI 119

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	183
PLN02322	154	PLN02322, PLN02322, acyl-CoA thioesterase	2e-62
cd03443	113	cd03443, PaaI_thioesterase, PaaI_thioesterase is a	4e-23
COG2050	141	COG2050, PaaI, HGG motif-containing thioesterase,	5e-20
TIGR00369	117	TIGR00369, unchar_dom_1, uncharacterized domain 1	6e-19
pfam03061	79	pfam03061, 4HBT, Thioesterase superfamily	7e-14
PRK10293	136	PRK10293, PRK10293, acyl-CoA esterase; Provisional	6e-13
PRK10254	137	PRK10254, PRK10254, thioesterase; Provisional	1e-09
cd03440	100	cd03440, hot_dog, The hotdog fold was initially id	2e-09
TIGR02286	114	TIGR02286, PaaD, phenylacetic acid degradation pro	4e-07

>gnl|CDD|177956 PLN02322, PLN02322, acyl-CoA thioesterase

 Score =  189 bits (482), Expect = 2e-62
 Identities = 99/177 (55%), Positives = 123/177 (69%), Gaps = 25/177 (14%)

Query: 4   SSSSNSKQRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIA 63
           S+SSN+K        D PL  +GFE +EL+P R+ G   V+   CQPFKVLHGGVSALIA
Sbjct: 1   SASSNTKAI------DPPLHMLGFEFDELSPTRVTGRLPVSPMCCQPFKVLHGGVSALIA 54

Query: 64  ESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVK 123
           ESLAS+GAHMASGFKRVAG+QL+INHLKSA+LGDLV A ATP++ GKTIQVW+V+LWK  
Sbjct: 55  ESLASLGAHMASGFKRVAGIQLSINHLKSADLGDLVFAEATPVSTGKTIQVWEVKLWKTT 114

Query: 124 EVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKHAGDALKNSA 180
           +                      ++ I+ISSS VTL+CNLP+PD+AK A + L+  A
Sbjct: 115 D-------------------KDKANKILISSSRVTLICNLPIPDNAKDAANMLRMQA 152

Length = 154

>gnl|CDD|239527 cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria

 Score = 88.4 bits (220), Expect = 4e-23
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 2/98 (2%)

Query: 24  AIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG-FKRVAG 82
            +G  + E+ P R++    V      P  ++HGG  A +A++   + A  A         
Sbjct: 1   LLGIRVVEVGPGRVVLRLPVRPRHLNPGGIVHGGAIATLADTAGGLAALSALPPGALAVT 60

Query: 83  VQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW 120
           V L +N+L+ A  GDL  A A  + LG+ + V +V + 
Sbjct: 61  VDLNVNYLRPARGGDL-TARARVVKLGRRLAVVEVEVT 97

Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ). Length = 113

>gnl|CDD|224961 COG2050, PaaI, HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 80.9 bits (200), Expect = 5e-20
 Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 2/107 (1%)

Query: 15  IAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMA 74
                  LK +G E+EE+          V      P  +LHGGV A +A+S A + A+  
Sbjct: 14  FLERSPFLKTLGIEIEEIEEGEAEATLPVDPELLNPGGILHGGVIAALADSAAGLAANSL 73

Query: 75  SGFKR-VAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW 120
            G       ++L IN L+  + GD V A A  ++LG+ + V ++ + 
Sbjct: 74  LGVVALAVTLELNINFLRPVKEGD-VTAEARVLHLGRRVAVVEIEVK 119

Length = 141

>gnl|CDD|161843 TIGR00369, unchar_dom_1, uncharacterized domain 1

 Score = 77.8 bits (192), Expect = 6e-19
 Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 2/98 (2%)

Query: 22  LKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASM-GAHMASGFKRV 80
           +  +G E+EEL    +     V + + QPF  LHGGVSA +A++  S  G    SG + V
Sbjct: 3   VSFLGIEIEELGDGFLEATMPVDERTLQPFGSLHGGVSAALADTAGSAAGYLCNSGGQAV 62

Query: 81  AGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVR 118
            G++L  NHL+ A  G  VRA+A  ++LG+   V ++ 
Sbjct: 63  VGLELNANHLRPAREGK-VRAIAQVVHLGRQTGVAEIE 99

Most proteins containing this domain consist almost entirely of a single copy of this domain. A protein from C. elegans consists of two tandem copies of the domain. The domain is also found as the N-terminal region of an apparent initiation factor eIF-2B alpha subunit of Aquifex aeolicus. The function of the domain is unknown. Length = 117

>gnl|CDD|217345 pfam03061, 4HBT, Thioesterase superfamily

 Score = 63.4 bits (155), Expect = 7e-14
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)

Query: 51  FKVLHGGVSALIAESLASMGAHMASGFKR-VAGVQLTINHLKSAELGDLVRAVATPINLG 109
             V+HGGV   +A+  A   A    G  + V  V+L I+ L+   LGD++   A  + LG
Sbjct: 1   GGVVHGGVYLALADEAAGAAARSLGGSGQVVVVVELNIDFLRPVRLGDVLTVEARVVRLG 60

Query: 110 KTIQVWQVRLWK 121
           +T  V +V +  
Sbjct: 61  RTSAVVEVEVRD 72

This family contains a wide variety of enzymes, principally thioesterases. This family includes 4HBT (EC 3.1.2.23) which catalyzes the final step in the biosynthesis of 4-hydroxybenzoate from 4-chlorobenzoate in the soil dwelling microbe Pseudomonas CBS-3. This family includes various cytosolic long-chain acyl-CoA thioester hydrolases. Long-chain acyl-CoA hydrolases hydrolyse palmitoyl-CoA to CoA and palmitate, they also catalyze the hydrolysis of other long chain fatty acyl-CoA thioesters. Length = 79

>gnl|CDD|182360 PRK10293, PRK10293, acyl-CoA esterase; Provisional

 Score = 62.7 bits (152), Expect = 6e-13
 Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 2/79 (2%)

Query: 43  VTQNSCQPFKVLHGGVSALIAESLASMGAHMAS-GFKRVAGVQLTINHLKSAELGDLVRA 101
           V   + QPF +LHGG S ++AES+ S+  ++ + G ++V G+++  NH++SA  G  VR 
Sbjct: 42  VDSRTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREGR-VRG 100

Query: 102 VATPINLGKTIQVWQVRLW 120
           V  P++LG   QVWQ+ ++
Sbjct: 101 VCKPLHLGSRHQVWQIEIF 119

Length = 136

>gnl|CDD|182337 PRK10254, PRK10254, thioesterase; Provisional

 Score = 53.5 bits (128), Expect = 1e-09
 Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 2/70 (2%)

Query: 49  QPFKVLHGGVSALIAESLASM-GAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPIN 107
           QPF +LHGG SA +AE+L SM G  M    + V G +L   H +    G  VR V  P++
Sbjct: 48  QPFGLLHGGASAALAETLGSMAGFLMTRDGQCVVGTELNATHHRPVSEGK-VRGVCQPLH 106

Query: 108 LGKTIQVWQV 117
           LG+  Q W++
Sbjct: 107 LGRQNQSWEI 116

Length = 137

>gnl|CDD|239524 cd03440, hot_dog, The hotdog fold was initially identified in the E

 Score = 52.5 bits (126), Expect = 2e-09
 Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 1/86 (1%)

Query: 41  FRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKR-VAGVQLTINHLKSAELGDLV 99
             VT        ++HGG+   +A+  A   A    G       + L +  L+    GD +
Sbjct: 5   LTVTPEDIDGGGIVHGGLLLALADEAAGAAAARLGGRGLGAVTLSLDVRFLRPVRPGDTL 64

Query: 100 RAVATPINLGKTIQVWQVRLWKVKEV 125
              A  + +G++    +V +      
Sbjct: 65  TVEAEVVRVGRSSVTVEVEVRNEDGK 90

coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis. Length = 100

>gnl|CDD|131339 TIGR02286, PaaD, phenylacetic acid degradation protein PaaD

 Score = 46.3 bits (110), Expect = 4e-07
 Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 2/98 (2%)

Query: 22  LKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVA 81
            KA+G ++ EL P        V  +        HGG    +A+S A   A  + G   VA
Sbjct: 1   AKALGIDILELGPGFARVAMTVRADMLNGHGTAHGGFLFSLADS-AFAYACNSYGDAAVA 59

Query: 82  GVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRL 119
             Q TI+ L+    G+ + A A  ++ G     + V +
Sbjct: 60  -AQCTIDFLRPGRAGERLEAEAVEVSRGGRTGTYDVEV 96

This member of the domain family TIGR00369 (which is, in turn, a member of the pfam03061 thioesterase superfamily) is nearly always found adjacent to other genes of the phenylacetic acid degradation pathway. Its function is currently unknown, but a role as a thioesterase is not inconsistent with the proposed overall pathway. Sequences scoring between trusted and noise include those from archaea and other species not known to catabolize phenylacetic acid and which are not adjacent to other genes potentially involved with such a pathway. Length = 114

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	183
PLN02322	154	acyl-CoA thioesterase	100.0
PRK10254	137	thioesterase; Provisional	100.0
PRK10293	136	acyl-CoA esterase; Provisional	100.0
PRK11688	154	hypothetical protein; Provisional	99.96
COG2050	141	PaaI HGG motif-containing thioesterase, possibly i	99.96
TIGR00369	117	unchar_dom_1 uncharacterized domain 1. Most protei	99.96
TIGR02286	114	PaaD phenylacetic acid degradation protein PaaD. S	99.95
KOG3328	148	consensus HGG motif-containing thioesterase [Gener	99.94
TIGR02447	138	yiiD_Cterm thioesterase domain, putative. This fam	99.91
cd03443	113	PaaI_thioesterase PaaI_thioesterase is a tetrameri	99.86
PF14539	132	DUF4442: Domain of unknown function (DUF4442); PDB	99.76
cd03442	123	BFIT_BACH Brown fat-inducible thioesterase (BFIT).	99.71
PRK10694	133	acyl-CoA esterase; Provisional	99.66
PF03061	79	4HBT: Thioesterase superfamily; InterPro: IPR00668	99.66
cd00556	99	Thioesterase_II Thioesterase II (TEII) is thought	99.64
COG1607	157	Acyl-CoA hydrolase [Lipid metabolism]	99.59
PRK04424	185	fatty acid biosynthesis transcriptional regulator;	99.46
cd00586	110	4HBT 4-hydroxybenzoyl-CoA thioesterase (4HBT). Cat	99.39
cd03440	100	hot_dog The hotdog fold was initially identified i	99.18
PLN02647	437	acyl-CoA thioesterase	99.16
PF09500	144	YiiD_Cterm: Putative thioesterase (yiiD_Cterm); In	99.16
PLN02647	437	acyl-CoA thioesterase	99.08
PRK10800	130	acyl-CoA thioesterase YbgC; Provisional	98.84
PF13622	255	4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A	98.83
cd03445	94	Thioesterase_II_repeat2 Thioesterase II (TEII) is	98.81
TIGR02799	126	thio_ybgC tol-pal system-associated acyl-CoA thioe	98.79
KOG4781	237	consensus Uncharacterized conserved protein [Funct	98.71
cd03449	128	R_hydratase (R)-hydratase [(R)-specific enoyl-CoA	98.66
COG0824	137	FcbC Predicted thioesterase [General function pred	98.65
TIGR00051	117	acyl-CoA thioester hydrolase, YbgC/YbaW family. Th	98.58
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	98.33
TIGR00189	271	tesB acyl-CoA thioesterase II. Subunit: homotetram	98.32
PF13279	121	4HBT_2: Thioesterase-like superfamily; PDB: 2W3X_E	98.3
cd01288	131	FabZ FabZ is a 17kD beta-hydroxyacyl-acyl carrier	98.3
PRK00006	147	fabZ (3R)-hydroxymyristoyl-ACP dehydratase; Review	98.22
cd03441	127	R_hydratase_like (R)-hydratase [(R)-specific enoyl	97.96
PRK10526	286	acyl-CoA thioesterase II; Provisional	97.92
cd03455	123	SAV4209 SAV4209 is a Streptomyces avermitilis prot	97.9
cd03453	127	SAV4209_like SAV4209_like. Similar in sequence to	97.82
PLN02868	413	acyl-CoA thioesterase family protein	97.81
TIGR01750	140	fabZ beta-hydroxyacyl-[acyl carrier protein] dehyd	97.8
cd03447	126	FAS_MaoC FAS_MaoC, the MaoC-like hot dog fold of t	97.75
cd03451	146	FkbR2 FkbR2 is a Streptomyces hygroscopicus protei	97.75
KOG2763	357	consensus Acyl-CoA thioesterase [Lipid transport a	97.72
cd03446	140	MaoC_like MoaC_like Similar to the MaoC (monoamine	97.7
COG4109	432	Predicted transcriptional regulator containing CBS	97.69
PRK13692	159	(3R)-hydroxyacyl-ACP dehydratase subunit HadA; Pro	97.69
cd03454	140	YdeM YdeM is a Bacillus subtilis protein that belo	97.65
cd00493	131	FabA_FabZ FabA/Z, beta-hydroxyacyl-acyl carrier pr	97.61
PRK08190	466	bifunctional enoyl-CoA hydratase/phosphate acetylt	97.58
cd01289	138	FabA_like Domain of unknown function, appears to b	97.54
cd03452	142	MaoC_C MaoC_C The C-terminal hot dog fold of the M	97.49
PRK13691	166	(3R)-hydroxyacyl-ACP dehydratase subunit HadC; Pro	97.4
COG5496	130	Predicted thioesterase [General function predictio	97.38
cd03444	104	Thioesterase_II_repeat1 Thioesterase II (TEII) is	97.34
PLN02370	419	acyl-ACP thioesterase	97.2
PF13622	255	4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A	97.16
PRK13188	464	bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetyl	97.06
TIGR00189	271	tesB acyl-CoA thioesterase II. Subunit: homotetram	97.03
PF07977	138	FabA: FabA-like domain; InterPro: IPR013114 Fatty	96.84
cd01287	150	FabA FabA, beta-hydroxydecanoyl-acyl carrier prote	96.44
KOG3016	294	consensus Acyl-CoA thioesterase [Lipid transport a	96.44
COG2030	159	MaoC Acyl dehydratase [Lipid metabolism]	96.1
PF01575	122	MaoC_dehydratas: MaoC like domain; InterPro: IPR00	96.0
PRK13693	142	(3R)-hydroxyacyl-ACP dehydratase subunit HadB; Pro	95.98
cd03448	122	HDE_HSD HDE_HSD The R-hydratase-like hot dog fold	95.89
cd03450	149	NodN NodN (nodulation factor N) contains a single	95.79
KOG2763	357	consensus Acyl-CoA thioesterase [Lipid transport a	95.75
PRK10526	286	acyl-CoA thioesterase II; Provisional	95.64
PF13452	132	MaoC_dehydrat_N: N-terminal half of MaoC dehydrata	95.44
TIGR02278	663	PaaN-DH phenylacetic acid degradation protein paaN	95.14
PF01643	261	Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR0	95.09
PRK05174	172	3-hydroxydecanoyl-(acyl carrier protein) dehydrata	95.03
PLN02864	310	enoyl-CoA hydratase	94.87
PRK11563	675	bifunctional aldehyde dehydrogenase/enoyl-CoA hydr	94.77
TIGR01749	169	fabA beta-hydroxyacyl-[acyl carrier protein] dehyd	94.24
COG1946	289	TesB Acyl-CoA thioesterase [Lipid metabolism]	94.24
PLN02868	413	acyl-CoA thioesterase family protein	94.09
COG0764	147	FabA 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl ca	93.18
PF03756	132	AfsA: A-factor biosynthesis hotdog domain; InterPr	92.41
PLN02864	310	enoyl-CoA hydratase	90.89
COG1946	289	TesB Acyl-CoA thioesterase [Lipid metabolism]	90.67
PF02551	131	Acyl_CoA_thio: Acyl-CoA thioesterase; InterPro: IP	88.95
PF14765	295	PS-DH: Polyketide synthase dehydratase; PDB: 3KG7_	86.93
PF01643	261	Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR0	81.04

>PLN02322 acyl-CoA thioesterase

Probab=100.00  E-value=1.4e-34  Score=232.78  Aligned_cols=146  Identities=64%  Similarity=1.044  Sum_probs=130.1

Q ss_pred             CCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCC
Q 030085           16 AVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAEL   95 (183)
Q Consensus        16 ~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~   95 (183)
                      ...|||+++||+++.++++|+++++||++++|+||+|.+|||++++|+|+++++++....++..++|++++||||||++.
T Consensus         7 ~~~dpf~~~LGi~l~ei~~G~~~~~m~v~~~~~N~~G~vHGGv~atLaDta~g~A~~~~~~~~~~vTiel~infLrpa~~   86 (154)
T PLN02322          7 KAIDPPLHMLGFEFDELSPTRVTGRLPVSPMCCQPFKVLHGGVSALIAESLASLGAHMASGFKRVAGIQLSINHLKSADL   86 (154)
T ss_pred             cccchHHHHCCCEEEEEECCEEEEEEECCHHHcCCCCCccHHHHHHHHHHHHHHHHhhccCCCceEEEEEEEEEeccCCC
Confidence            35799999999999999999999999999999999999999999999999999888654444578999999999999999


Q ss_pred             CCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCCCccchhHHH
Q 030085           96 GDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKHAGDA  175 (183)
Q Consensus        96 Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p~~~~~~~~~  175 (183)
                      |+.|+|+|+++|.|||+++|+++||++....|                   +++++||.+++|++++.|+|+.+|++++-
T Consensus        87 G~~L~Aea~vv~~Gr~~~~~ev~V~~~~~~~~-------------------~~~~lva~a~~T~~~~~~~~~~~~~~~~~  147 (154)
T PLN02322         87 GDLVFAEATPVSTGKTIQVWEVKLWKTTDKDK-------------------ANKILISSSRVTLICNLPIPDNAKDAANM  147 (154)
T ss_pred             CCEEEEEEEEEecCCCEEEEEEEEEECCCCcc-------------------cCCeEEEEEEEEEEEccCChhhhhhhHHH
Confidence            98999999999999999999999998321000                   23899999999999999999999999999


Q ss_pred             HHhhh
Q 030085          176 LKNSA  180 (183)
Q Consensus       176 ~~~~~  180 (183)
                      |+--+
T Consensus       148 ~~~~~  152 (154)
T PLN02322        148 LRMQA  152 (154)
T ss_pred             HHHhh
Confidence            87543

>PRK10254 thioesterase; Provisional

Probab=100.00  E-value=8.1e-32  Score=212.41  Aligned_cols=131  Identities=23%  Similarity=0.383  Sum_probs=118.6

Q ss_pred             CCCchhhccccCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc-CCceeEEE
Q 030085            5 SSSNSKQRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS-GFKRVAGV   83 (183)
Q Consensus         5 ~~~~~~~~~~~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~-~~~~~vTv   83 (183)
                      .+....+.++. .++||.++||+++.++++|+++++||++++++||+|.+|||++++|+|+++++|+.+.. ++..++|+
T Consensus         5 ~~~~~~~~~~~-~~~~~~~~LGi~i~ei~~g~~~~~l~v~~~~~n~~G~vHGGv~~tLaD~a~g~A~~~~~~~g~~~vTi   83 (137)
T PRK10254          5 RHLTLDELNAT-SDNTMVAHLGIVYTRLGDDVLEAEMPVDTRTHQPFGLLHGGASAALAETLGSMAGFLMTRDGQCVVGT   83 (137)
T ss_pred             ccCCHHHHhhh-cccchHHhhCcEEEEEeCCEEEEEEEcCccccCCCCcchHHHHHHHHHHHHHHHHHhhCCCCCeEEEE
Confidence            33444555555 68899999999999999999999999999999999999999999999999999987654 45789999


Q ss_pred             EEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085           84 QLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus        84 ~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      +++||||||++.| .|+|+|+++|.||++.+|+++|++                         ++|+++|.+++|+++.
T Consensus        84 el~in~Lrp~~~g-~l~a~a~vi~~Gr~~~v~~~~v~d-------------------------~~g~l~a~~~~t~~i~  136 (137)
T PRK10254         84 ELNATHHRPVSEG-KVRGVCQPLHLGRQNQSWEIVVFD-------------------------EQGRRCCTCRLGTAVL  136 (137)
T ss_pred             EEEeEEeccCcCC-eEEEEEEEEecCcCEEEEEEEEEc-------------------------CCCCEEEEEEEEEEEe
Confidence            9999999999988 799999999999999999999998                         7899999999999853

>PRK10293 acyl-CoA esterase; Provisional

Probab=100.00  E-value=4.9e-32  Score=212.97  Aligned_cols=120  Identities=28%  Similarity=0.512  Sum_probs=112.6

Q ss_pred             CCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC-CceeEEEEEeEEEecCCC
Q 030085           16 AVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG-FKRVAGVQLTINHLKSAE   94 (183)
Q Consensus        16 ~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~-~~~~vTv~l~i~flrpa~   94 (183)
                      ...+||.++||++++++++|+++++||++++|+||+|.+|||++++|+|.++++++.+..+ +..++|++++||||||++
T Consensus        15 ~~~~~~~~~LGi~i~~~~~g~~~~~~~v~~~~~n~~G~lHGGv~~tLaD~a~~~a~~~~~~~~~~~vTiel~infl~p~~   94 (136)
T PRK10293         15 MGEGNMVGLLDIRFEHIGDDTLEATMPVDSRTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGLEINANHVRSAR   94 (136)
T ss_pred             hccccHHHhcCcEEEEEeCCEEEEEEEcCHHHcCCcCcccHHHHHHHHHHHHHHHHHhcccCCceEEEEEEEeEEecccC
Confidence            3568999999999999999999999999999999999999999999999999988877654 467899999999999999


Q ss_pred             CCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           95 LGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        95 ~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      .| .|+|+|+++|.|||+++|+++++|                         ++|+++|.+++|+++
T Consensus        95 ~g-~l~a~a~vv~~Gr~~~~~~~~v~d-------------------------~~g~l~A~~~~t~~i  135 (136)
T PRK10293         95 EG-RVRGVCKPLHLGSRHQVWQIEIFD-------------------------EKGRLCCSSRLTTAI  135 (136)
T ss_pred             Cc-eEEEEEEEEecCCCEEEEEEEEEe-------------------------CCCCEEEEEEEEEEE
Confidence            88 799999999999999999999999                         789999999999985

>PRK11688 hypothetical protein; Provisional

Probab=99.96  E-value=7.1e-29  Score=197.03  Aligned_cols=126  Identities=22%  Similarity=0.328  Sum_probs=111.4

Q ss_pred             hhccccC-CCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcC--CCCcccHHHHHHHHHHHHHHHHHHhcC----------
Q 030085           10 KQRKRIA-VPDAPLKAIGFELEELTPERIIGCFRVTQNSCQ--PFKVLHGGVSALIAESLASMGAHMASG----------   76 (183)
Q Consensus        10 ~~~~~~~-~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~N--p~G~lHGG~~a~LaD~A~g~a~~~~~~----------   76 (183)
                      +..+.+. ..+||.++||++++++++|+++++|+++++|+|  +.|.+|||++++|+|.++++++++...          
T Consensus        11 ~~~~~~~~~~~pf~~~lG~~~~~~~~g~~~~~l~~~~~~~~n~~~G~vHGG~i~tl~D~a~g~a~~~~~~~~~~~~~~~~   90 (154)
T PRK11688         11 KLVGEIFVYHMPFNRLLGLELERLEPDFVELSFKMQPELVGNIAQSILHGGVIASVLDVAGGLVCVGGILARHEDISEEE   90 (154)
T ss_pred             HHHHHHHHhcCCHHHHhCcEEEEEeCCEEEEEeeCCHHHcCCCCcCeeeHHHHHHHHHHHHHHHHHhhcccccccccccc
Confidence            3344444 378999999999999999999999999999985  689999999999999999999876431          


Q ss_pred             ----CceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEE
Q 030085           77 ----FKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMI  152 (183)
Q Consensus        77 ----~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lv  152 (183)
                          ...++|++|++|||||++ |+.|+++|+++|.|||+++++++|++                         ++|+++
T Consensus        91 ~~~~~~~~vTi~l~i~fl~p~~-g~~l~a~a~v~~~g~r~~~~~~~i~~-------------------------~~g~lv  144 (154)
T PRK11688         91 LRQRLSRLGTIDLRVDYLRPGR-GERFTATSSVLRAGNKVAVARMELHN-------------------------EQGVHI  144 (154)
T ss_pred             cccccccceEEEEEEEeeccCC-CCeEEEEEEEEEccCCEEEEEEEEEC-------------------------CCCCEE
Confidence                124689999999999997 77999999999999999999999998                         679999


Q ss_pred             EEEEEEEEE
Q 030085          153 SSSTVTLLC  161 (183)
Q Consensus       153 A~~t~T~~~  161 (183)
                      |++++||++
T Consensus       145 A~a~~t~~v  153 (154)
T PRK11688        145 ASGTATYLV  153 (154)
T ss_pred             EEEEEEEEe
Confidence            999999984

>COG2050 PaaI HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.96  E-value=3e-28  Score=190.19  Aligned_cols=123  Identities=27%  Similarity=0.371  Sum_probs=113.9

Q ss_pred             cCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCC-ceeEEEEEeEEEecCC
Q 030085           15 IAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGF-KRVAGVQLTINHLKSA   93 (183)
Q Consensus        15 ~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~-~~~vTv~l~i~flrpa   93 (183)
                      +...+||.+.||++++++++|+++++|++.+++.|++|++|||++++|+|.++++|++...+. ...+|++++||||||+
T Consensus        14 ~~~~~~~~~~lg~~~~~~~~g~~~~~l~~~~~~~~~~G~~HGG~i~alaD~a~~~a~~~~~~~~~~~~ti~l~i~flr~~   93 (141)
T COG2050          14 FLERSPFLKTLGIEIEEIEEGEAEATLPVDPELLNPGGILHGGVIAALADSAAGLAANSLLGVVALAVTLELNINFLRPV   93 (141)
T ss_pred             hhcccchhhhcCcEEEEEecceEEEEeecCHHHcCCCceeeHHHHHHHHHHHHHHHHhhccCccceeEEEEEEehhccCC
Confidence            347899999999999999999999999999999999999999999999999999999987665 4569999999999999


Q ss_pred             CCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085           94 ELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus        94 ~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      +.|+ |+++|+|+|.||++++|++++++.                        +.+++||++++|+++.
T Consensus        94 ~~g~-v~a~a~v~~~G~~~~v~~i~v~~~------------------------~~~~lva~~~~t~~v~  137 (141)
T COG2050          94 KEGD-VTAEARVLHLGRRVAVVEIEVKND------------------------EGGRLVAKGTGTYAVL  137 (141)
T ss_pred             CCCe-EEEEEEEEeeCCEEEEEEEEEEEC------------------------CCCeEEEEEEEEEEEe
Confidence            9996 999999999999999999999961                        5679999999999953

>TIGR00369 unchar_dom_1 uncharacterized domain 1

Probab=99.96  E-value=4.4e-28  Score=182.62  Aligned_cols=115  Identities=30%  Similarity=0.444  Sum_probs=107.9

Q ss_pred             chhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC-CceeEEEEEeEEEecCCCCCCE
Q 030085           20 APLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG-FKRVAGVQLTINHLKSAELGDL   98 (183)
Q Consensus        20 p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~-~~~~vTv~l~i~flrpa~~Gd~   98 (183)
                      ||.++||+++.+++++++++++++.++++|+.|.+|||++++++|.++++++....+ +...+|++++|+|+||++.| .
T Consensus         1 p~~~~lg~~~~~~~~g~~~~~~~v~~~~~n~~g~vhGG~l~~l~D~a~~~a~~~~~~~~~~~vt~~l~i~f~~p~~~g-~   79 (117)
T TIGR00369         1 PLVSFLGIEIEELGDGFLEATMPVDERTLQPFGSLHGGVSAALADTAGSAAGYLCNSGGQAVVGLELNANHLRPAREG-K   79 (117)
T ss_pred             CcccccCeEEEEecCCEEEEEEEcCHHHcCCcccChHHHHHHHHHHHHHHHHHhhcCCCceEEEEEEEeeeccccCCC-E
Confidence            789999999999999999999999999999999999999999999999887665443 46789999999999999999 8


Q ss_pred             EEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085           99 VRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus        99 l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      |+++|++++.||++.++++++++                         ++|++||++++||+
T Consensus        80 l~a~a~v~~~gr~~~~~~~~i~~-------------------------~~g~~va~~~~t~~  116 (117)
T TIGR00369        80 VRAIAQVVHLGRQTGVAEIEIVD-------------------------EQGRLCALSRGTTA  116 (117)
T ss_pred             EEEEEEEEecCceEEEEEEEEEC-------------------------CCCCEEEEEEEEEc
Confidence            99999999999999999999998                         67999999999998

Most proteins containing this domain consist almost entirely of a single copy of this domain. A protein from C. elegans consists of two tandem copies of the domain. The domain is also found as the N-terminal region of an apparent initiation factor eIF-2B alpha subunit of Aquifex aeolicus. The function of the domain is unknown.

>TIGR02286 PaaD phenylacetic acid degradation protein PaaD

Probab=99.95  E-value=5.8e-27  Score=176.31  Aligned_cols=112  Identities=20%  Similarity=0.213  Sum_probs=104.1

Q ss_pred             hhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEE
Q 030085           23 KAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAV  102 (183)
Q Consensus        23 ~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~  102 (183)
                      ++||++++++++|++.++|+++++|+|+.|++|||++++++|.++++++..  .....+|++++++|+||++.||.|+++
T Consensus         2 ~~lg~~i~~~~~g~~~~~l~~~~~~~n~~g~~HGG~i~al~D~~~~~~~~~--~~~~~~t~~~~i~f~rp~~~G~~l~~~   79 (114)
T TIGR02286         2 KALGIDILELGPGFARVAMTVRADMLNGHGTAHGGFLFSLADSAFAYACNS--YGDAAVAAQCTIDFLRPGRAGERLEAE   79 (114)
T ss_pred             cccCeEEEEecCCEEEEEEECCHHHcCcCCCchHHHHHHHHHHHHHHHhcC--CCCceEEEEEEEEEecCCCCCCEEEEE
Confidence            689999999999999999999999999999999999999999998777643  334578999999999999999999999


Q ss_pred             EEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          103 ATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       103 a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      |++++.||+++++++++++                         ++|+++|.+++||++
T Consensus        80 a~v~~~g~~~~~~~~~i~~-------------------------~~~~~va~~~~t~~~  113 (114)
T TIGR02286        80 AVEVSRGGRTGTYDVEVVN-------------------------QEGELVALFRGTSRR  113 (114)
T ss_pred             EEEEEeCCcEEEEEEEEEc-------------------------CCCCEEEEEEEEEEE
Confidence            9999999999999999998                         679999999999994

Sequences scoring between trusted and noise include those from archaea and other species not known to catabolize phenylacetic acid and which are not adjacent to other genes potentially involved with such a pathway.

>KOG3328 consensus HGG motif-containing thioesterase [General function prediction only]

Probab=99.94  E-value=1.5e-26  Score=184.64  Aligned_cols=118  Identities=30%  Similarity=0.426  Sum_probs=108.6

Q ss_pred             cCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEE
Q 030085           25 IGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVAT  104 (183)
Q Consensus        25 Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~  104 (183)
                      -++++...+||+++++|++++.|+|++++||||++|+|+|.++++|+....+..+.+++||+|+||+||++||.|.++|+
T Consensus        27 ~~i~~~~~~~Grv~ce~kV~~~~~N~~k~LHGG~tAtLvD~i~s~~~~~~~~~~~gvsvdLsvsyL~~AklGe~l~i~a~  106 (148)
T KOG3328|consen   27 NNIRIVSAEPGRVSCELKVTPDHLNRFKTLHGGATATLVDLITSAALLMTSGFKPGVSVDLSVSYLSSAKLGEELEIEAT  106 (148)
T ss_pred             CceEEeeccCceEEEEEEeCHHHcCccccccccchhhHHHHHhhHHHHhccCCCCceEEEEEhhhccccCCCCeEEEEEE
Confidence            46799999999999999999999999999999999999999999887766667899999999999999999999999999


Q ss_pred             EEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCCC
Q 030085          105 PINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPD  167 (183)
Q Consensus       105 vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p~  167 (183)
                      ++|.||+++||+|++|+.                        .+|+++|.+++|+| ..|.+.
T Consensus       107 ~vr~Gk~la~t~v~l~~K------------------------~t~kiia~grhtk~-~~~~~~  144 (148)
T KOG3328|consen  107 VVRVGKTLAFTDVELRRK------------------------STGKIIAKGRHTKY-FRPASK  144 (148)
T ss_pred             EeecCceEEEEEEEEEEc------------------------CCCeEEEecceEEE-eecCCC
Confidence            999999999999999982                        67999999999999 445443

>TIGR02447 yiiD_Cterm thioesterase domain, putative

Probab=99.91  E-value=5.5e-23  Score=161.25  Aligned_cols=118  Identities=10%  Similarity=-0.015  Sum_probs=101.6

Q ss_pred             cCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHh----cCCceeEEEEEeEEEe
Q 030085           15 IAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMA----SGFKRVAGVQLTINHL   90 (183)
Q Consensus        15 ~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~----~~~~~~vTv~l~i~fl   90 (183)
                      +....||.++||+++++++++++++++|+.++ .|+.|++|||++++|+|.+++.++...    ..+..++|++++|+|+
T Consensus         2 ~~~~ip~~~~lGi~v~e~~~g~~~v~~pl~~n-~N~~G~~hGG~l~tlad~a~~~~~~~~~~~~~~~~~~vt~~~~i~yl   80 (138)
T TIGR02447         2 LHSAIPLSEAMGIAVSSYTGGELRLSAPLAAN-INHHGTMFGGSLYTLATLSGWGLLWLRLQELGIDGDIVIADSHIRYL   80 (138)
T ss_pred             chhhCCHHHHcCCEEEEeeCCEEEEEeECCCC-cCCCCceehhHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEeeeEEc
Confidence            34568999999999999999999999999996 899999999999999998866544322    1235789999999999


Q ss_pred             cCCCCCCEEEEEEEE-------------EEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEE
Q 030085           91 KSAELGDLVRAVATP-------------INLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTV  157 (183)
Q Consensus        91 rpa~~Gd~l~a~a~v-------------i~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~  157 (183)
                      +|++.+  ++++|++             .+.||+..+++++|++                          +|+++|.+++
T Consensus        81 ~P~~~~--~~a~~~~~~~~~~~~~~~~l~~~gr~~~~~~~~v~~--------------------------~~~lvA~~~g  132 (138)
T TIGR02447        81 APVTGD--PVANCEAPDLESWEAFLATLQRGGKARVKLEAQISS--------------------------DGKLAATFSG  132 (138)
T ss_pred             CCcCCC--eEEEEEcCCHHHHHHHHHHHHhCCceEEEEEEEEEE--------------------------CCEEEEEEEE
Confidence            999854  7777777             7999999999999996                          4699999999


Q ss_pred             EEEE
Q 030085          158 TLLC  161 (183)
Q Consensus       158 T~~~  161 (183)
                      ||++
T Consensus       133 ~~~~  136 (138)
T TIGR02447       133 EYVA  136 (138)
T ss_pred             EEEE
Confidence            9984

This family consists of a broadly distributed uncharacterized domain found often as a standalone protein. The member from Shewanella oneidensis, PDB|1T82_A (Forouhar, et al., unpublished) is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an Acetyltransf_1 domain (PFAM model pfam00583). The function of this protein is unknown.

>cd03443 PaaI_thioesterase PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria

Probab=99.86  E-value=4e-20  Score=135.45  Aligned_cols=111  Identities=23%  Similarity=0.317  Sum_probs=102.5

Q ss_pred             hcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc-CCceeEEEEEeEEEecCCCCCCEEEEE
Q 030085           24 AIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS-GFKRVAGVQLTINHLKSAELGDLVRAV  102 (183)
Q Consensus        24 ~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~-~~~~~vTv~l~i~flrpa~~Gd~l~a~  102 (183)
                      .+|+++.+.+++++++++++.+.++|+.|.+|||++++++|.+++..+.... ++...++++++++|++|++. +.|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~vhgg~l~~l~d~a~~~~~~~~~~~~~~~~~~~~~i~f~~p~~~-~~v~~~   79 (113)
T cd03443           1 LLGIRVVEVGPGRVVLRLPVRPRHLNPGGIVHGGAIATLADTAGGLAALSALPPGALAVTVDLNVNYLRPARG-GDLTAR   79 (113)
T ss_pred             CCcEEEEEecCCeEEEEeeCcHhhcCCCCeEeHHHHHHHHHHHHHHHHhhccCCCCceEEEEEEEeEEcCCCC-CeEEEE
Confidence            3789999999999999999999999999999999999999999988877654 34678999999999999999 799999


Q ss_pred             EEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          103 ATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       103 a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      +++.+.||+...+++++++                         ++|+++|+++++|+
T Consensus        80 ~~v~~~g~~~~~~~~~~~~-------------------------~~~~~~a~a~~~~~  112 (113)
T cd03443          80 ARVVKLGRRLAVVEVEVTD-------------------------EDGKLVATARGTFA  112 (113)
T ss_pred             EEEEecCceEEEEEEEEEC-------------------------CCCCEEEEEEEEEe
Confidence            9999999999999999997                         56899999999987

Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).

>PF14539 DUF4442: Domain of unknown function (DUF4442); PDB: 1YOC_B 1SH8_B

Probab=99.76  E-value=1.8e-17  Score=129.06  Aligned_cols=118  Identities=20%  Similarity=0.213  Sum_probs=93.2

Q ss_pred             CCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCC-ceeEEEEEeEEEecCCCC
Q 030085           17 VPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGF-KRVAGVQLTINHLKSAEL   95 (183)
Q Consensus        17 ~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~-~~~vTv~l~i~flrpa~~   95 (183)
                      ...||...+|+++++++++++.++||..+...|+.|++|||++++++|.++|+.+....+. ..++..+++|+|++|++ 
T Consensus        11 ~~~P~~~~~g~~i~~~~~~~~~v~l~~~~~~~N~~gt~h~gAl~~laE~~~g~~~~~~l~~~~~~~~k~~~i~f~kpa~-   89 (132)
T PF14539_consen   11 NKVPFFGTAGIRIEEVDPGRVVVRLPLRPRNRNHVGTIHAGALFTLAEPAYGLLLMSNLGDKYRVWDKSAEIDFLKPAR-   89 (132)
T ss_dssp             HCSHHHHCCT-EEEEEETTEEEEEE-S-CCGB-TTSSB-HHHHHHHHHCHHHHHHHHHS-TTEEEEEEEEEEEE-S----
T ss_pred             hhcCccccceeEEEEEcCCEEEEEEcCCccccCcCcchHHHHHHHHHHHHHHHHHHHhCCCcEEEEEEeeEEEEEeccC-
Confidence            3568999999999999999999999999999999999999999999999999988887765 56789999999999998 


Q ss_pred             CCEEEEEEEEEEe--C-CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           96 GDLVRAVATPINL--G-KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        96 Gd~l~a~a~vi~~--G-r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      | .|++++++...  + |--..++++++|                         ++|.+||.++.|+|+
T Consensus        90 g-~v~a~~~~~~e~~~~~~~~~~~v~i~D-------------------------~~G~~Va~~~~t~~V  132 (132)
T PF14539_consen   90 G-DVTATAELTEEQIGERGELTVPVEITD-------------------------ADGEVVAEATITWYV  132 (132)
T ss_dssp             S--EEEEEE-TCCHCCHEEEEEEEEEEEE-------------------------TTC-EEEEEEEEEEE
T ss_pred             C-cEEEEEEcCHHHhCCCcEEEEEEEEEE-------------------------CCCCEEEEEEEEEEC
Confidence            6 49999987653  2 556777899998                         789999999999984

>cd03442 BFIT_BACH Brown fat-inducible thioesterase (BFIT)

Probab=99.71  E-value=8.6e-16  Score=113.70  Aligned_cols=109  Identities=19%  Similarity=0.209  Sum_probs=92.8

Q ss_pred             eCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEE-eEEEecCCCCCCEEEEEEEEEEeCCc
Q 030085           33 TPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL-TINHLKSAELGDLVRAVATPINLGKT  111 (183)
Q Consensus        33 ~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrpa~~Gd~l~a~a~vi~~Gr~  111 (183)
                      .+++++.++++.+.++|+.|.+|||++++++|.++++++..... ...+++.+ +++|++|+..||.|.+++++.+.||+
T Consensus         4 ~~~~~~~~~~v~~~~~d~~g~v~~g~~~~~~d~a~~~~~~~~~~-~~~~~~~~~~~~f~~p~~~gd~l~i~~~v~~~g~~   82 (123)
T cd03442           4 EDTELSTRELVLPEDTNHHGTIFGGWLLEWMDELAGIAAYRHAG-GRVVTASVDRIDFLKPVRVGDVVELSARVVYTGRT   82 (123)
T ss_pred             CccceEEEEEeCCcccCcCCcEeHHHHHHHHHHHHHHHHHHHhC-CcEEEEEECceEEcCccccCcEEEEEEEEEEecCC
Confidence            56889999999999999999999999999999999877654432 34677788 79999999999999999999999999


Q ss_pred             EEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085          112 IQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus       112 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      ...+++++++.+                    ...++++++|+++.|+.+.
T Consensus        83 ~~~~~~~i~~~~--------------------~~~~~~~~~a~~~~~~v~~  113 (123)
T cd03442          83 SMEVGVEVEAED--------------------PLTGERRLVTSAYFTFVAL  113 (123)
T ss_pred             eEEEEEEEEEec--------------------CCCCcEEEEEEEEEEEEEE
Confidence            999999999821                    0012468999999999865

Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, and brown adipose tissues. The archeal and eukaryotic members of this family have two tandem copies of the conserved hot dog fold, while most bacterial members have only one copy.

>PRK10694 acyl-CoA esterase; Provisional

Probab=99.66  E-value=6.5e-15  Score=115.51  Aligned_cols=113  Identities=14%  Similarity=0.167  Sum_probs=93.3

Q ss_pred             eCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEE-eEEEecCCCCCCEEEEEEEEEEeCCc
Q 030085           33 TPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL-TINHLKSAELGDLVRAVATPINLGKT  111 (183)
Q Consensus        33 ~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrpa~~Gd~l~a~a~vi~~Gr~  111 (183)
                      .++..+....+.|+++|++|.+|||.++.++|.++++++.... +..++|+.+ .|+|++|++.||.|.++++|++.|++
T Consensus         8 ~~~~~~~~~~v~p~~~N~~g~lfGG~ll~~~D~~a~i~a~~~~-~~~~vtv~vd~i~F~~Pv~~Gd~l~~~a~V~~~g~s   86 (133)
T PRK10694          8 PQGELVLRTLAMPADTNANGDIFGGWLMSQMDIGGAILAKEIA-HGRVVTVRVEGMTFLRPVAVGDVVCCYARCVKTGTT   86 (133)
T ss_pred             CCCceEEEEEcChhhcCCCCcEeHHHHHHHHHHHHHHHHHHHc-CCceEEEEECceEECCCcccCcEEEEEEEEEEccCc
Confidence            3566888889999999999999999999999999988886654 357999999 78999999999999999999999999


Q ss_pred             EEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecC
Q 030085          112 IQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLP  164 (183)
Q Consensus       112 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p  164 (183)
                      ...++++++.++.     +.|            ..++.++++.+..||. .+.
T Consensus        87 S~~v~v~v~~~~~-----~~~------------~~g~~~~~~~~~~tfV-avd  121 (133)
T PRK10694         87 SISINIEVWVKKV-----ASE------------PIGQRYKATEALFTYV-AVD  121 (133)
T ss_pred             eEEEEEEEEEeec-----ccC------------CCCcEEEEEEEEEEEE-EEC
Confidence            9999999996311     000            0134578899999986 443

>PF03061 4HBT: Thioesterase superfamily; InterPro: IPR006683 This family contains a wide variety of enzymes, principally thioesterases

Probab=99.66  E-value=3.2e-15  Score=102.87  Aligned_cols=71  Identities=25%  Similarity=0.399  Sum_probs=66.0

Q ss_pred             CCcccHHHHHHHHHHHHHHHHHHhcCC-ceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEE
Q 030085           51 FKVLHGGVSALIAESLASMGAHMASGF-KRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWK  121 (183)
Q Consensus        51 ~G~lHGG~~a~LaD~A~g~a~~~~~~~-~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~  121 (183)
                      +|.+|||.+++++|.+++.++....+. ...++++++++|++|++.||.|++++++++.|++++++++++++
T Consensus         1 ~G~v~~g~~~~~~d~a~~~~~~~~~~~~~~~~~~~~~i~f~~p~~~gd~l~~~~~v~~~g~~~~~~~~~v~~   72 (79)
T PF03061_consen    1 NGIVHGGVYLSLFDEAASAALRSHGGDGRGVVTVELSIDFLRPVRPGDTLRVEARVVRVGRKSFTVEVEVYS   72 (79)
T ss_dssp             TSSBCHHHHHHHHHHHHHHHHHHHHSSTEEEEEEEEEEEESS-BBTTSEEEEEEEEEEEESSEEEEEEEEEE
T ss_pred             CCEEhHHHHHHHHHHHHHHHHHHhccCCcceEEEEEEEEEccccCCCeEEEEEEEEEEECCEEEEEEEEEEE
Confidence            599999999999999999888877654 67999999999999999999999999999999999999999999

This family includes 4HBT (3.1.2.23 from EC) which catalyses the final step in the biosynthesis of 4-hydroxybenzoate from 4-chlorobenzoate in the soil dwelling microbe Pseudomonas CBS-3. This family includes various cytosolic long-chain acyl-CoA thioester hydrolases. Long-chain acyl-CoA hydrolases hydrolyse palmitoyl-CoA to CoA and palmitate, they also catalyse the hydrolysis of other long chain fatty acyl-CoA thioesters. ; PDB: 3F5O_F 2F0X_D 2H4U_C 2PRX_A 2OV9_D 1YLI_B 3BJK_F 1IXL_A 3DKZ_B 2EIS_B ....

>cd00556 Thioesterase_II Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively

Probab=99.64  E-value=3.8e-15  Score=107.04  Aligned_cols=85  Identities=14%  Similarity=0.178  Sum_probs=76.8

Q ss_pred             CCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCC
Q 030085           51 FKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDG  130 (183)
Q Consensus        51 ~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~  130 (183)
                      .|.+|||++++++|.+++.++....+....+|++++++|++|+..++.+.+++++++.||+++++++++|+         
T Consensus        14 ~~~~hgg~la~l~D~a~~~~~~~~~~~~~~~t~~~~i~F~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~---------   84 (99)
T cd00556          14 DRRVFGGQLAAQSDLAALRTVPRPHGASGFASLDHHIYFHRPGDADEWLLYEVESLRDGRSRALRRGRAYQ---------   84 (99)
T ss_pred             CHHHHHHHHHHHHHHHHHhhhhcccCCCCeeeeEEEEEEcCCCCCCccEEEEEEecccCCCceEEEEEEEC---------
Confidence            78999999999999998877654333346899999999999999988999999999999999999999998         


Q ss_pred             CCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          131 RDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                                      ++|++||+++.+++
T Consensus        85 ----------------~~G~lva~~~~~~~   98 (99)
T cd00556          85 ----------------RDGKLVASATQSFL   98 (99)
T ss_pred             ----------------CCCcEEEEEEEeEc
Confidence                            67999999999986

TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.

>COG1607 Acyl-CoA hydrolase [Lipid metabolism]

Probab=99.59  E-value=5.7e-14  Score=113.73  Aligned_cols=106  Identities=20%  Similarity=0.256  Sum_probs=92.2

Q ss_pred             CCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEE-eEEEecCCCCCCEEEEEEEEEEeCCcE
Q 030085           34 PERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL-TINHLKSAELGDLVRAVATPINLGKTI  112 (183)
Q Consensus        34 ~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrpa~~Gd~l~a~a~vi~~Gr~~  112 (183)
                      .+....+.-+-|...|++|.+|||.+++++|.+++++|....+ .++||+.+ +|+|++|++.||.|.+.|+|.+.|||.
T Consensus        11 ~~~~~~~~lv~P~dtN~~g~ifGG~lm~~mD~~a~i~A~~~a~-~~vVTasvd~v~F~~Pv~vGd~v~~~a~v~~~GrTS   89 (157)
T COG1607          11 EGELVLRTLVMPSDTNPNGTIFGGWLLSWMDLAAAIAASRHAG-GRVVTASVDSVDFKKPVRVGDIVCLYARVVYTGRTS   89 (157)
T ss_pred             CceeEEEEEecCCccCcccccccHHHHHHHHHHHHHHHHHHhC-CeEEEEEeceEEEccccccCcEEEEEEEEeecCccc
Confidence            4566788888999999999999999999999999888877665 48999999 699999999999999999999999999


Q ss_pred             EEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          113 QVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       113 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      ..+.+++|.++..                    ++.-..++.+..||.
T Consensus        90 m~V~Vev~~~~~~--------------------~~~~~~~t~~~ft~V  117 (157)
T COG1607          90 MEVGVEVWAEDIR--------------------SGERRLATSAYFTFV  117 (157)
T ss_pred             EEEEEEEEEeccc--------------------CCcceEeeeEEEEEE
Confidence            9999999985331                    144566788888887

>PRK04424 fatty acid biosynthesis transcriptional regulator; Provisional

Probab=99.46  E-value=4.2e-12  Score=104.46  Aligned_cols=104  Identities=16%  Similarity=0.129  Sum_probs=90.4

Q ss_pred             EEEEEeCC-EEEEEEEcCCCCc-CCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEE
Q 030085           28 ELEELTPE-RIIGCFRVTQNSC-QPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATP  105 (183)
Q Consensus        28 ~~~~~~~g-~v~~~m~v~~~~~-Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~v  105 (183)
                      ++.++++| ++++.+.++.++. |..|.+|||++++++|.++. ++   .++..+++...+++|++|+.+||+|++++++
T Consensus        76 ~i~eie~g~~a~~~k~Vt~ne~fn~~~i~hG~f~~aqa~~la~-~~---~~~~~~~~~i~~irF~kPV~pGD~L~~ea~v  151 (185)
T PRK04424         76 ELIDLELGRSAISILEITEEMVFSKTGIARGHHLFAQANSLAV-AV---IDAELALTGVANIRFKRPVKLGERVVAKAEV  151 (185)
T ss_pred             eEEEecCCcEEEEEEecChhhccCCCCeecHHHHHHHHHHHHH-Hh---cCCcEEEEEeeeEEEccCCCCCCEEEEEEEE
Confidence            78888999 7999999999998 99999999999999998532 22   2445578888899999999999999999999


Q ss_pred             EEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          106 INLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       106 i~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      ++.++++..+.++++.                          +|++++.|+.+++.
T Consensus       152 ~~~~~~~~~v~~~~~v--------------------------~g~~V~ege~~~~~  181 (185)
T PRK04424        152 VRKKGNKYIVEVKSYV--------------------------GDELVFRGKFIMYR  181 (185)
T ss_pred             EEccCCEEEEEEEEEE--------------------------CCEEEEEEEEEEEE
Confidence            9999999999999884                          58999999999974

>cd00586 4HBT 4-hydroxybenzoyl-CoA thioesterase (4HBT)

Probab=99.39  E-value=2.5e-11  Score=85.94  Aligned_cols=98  Identities=14%  Similarity=0.174  Sum_probs=86.4

Q ss_pred             EEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc--------CCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCC
Q 030085           39 GCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS--------GFKRVAGVQLTINHLKSAELGDLVRAVATPINLGK  110 (183)
Q Consensus        39 ~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~--------~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr  110 (183)
                      .++++.+.++|+.|.+|+|.++.++|.+....+....        .+...++.+++++|++|+..||.|.+++++.+.++
T Consensus         3 ~~~~v~~~d~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~v~~~~~~~~~   82 (110)
T cd00586           3 LEIRVRFGDTDAAGHVNNARYLRYFEEAREEFLRELGLGYDELEEQGLGLVVVELEIDYLRPLRLGDRLTVETRVLRLGR   82 (110)
T ss_pred             EEEEEEEhhcCCCCEEchhHHHHHHHHHHHHHHHHcCCCHHHHHhCCceEEEEEeEeeEcCccCCCCEEEEEEEEEecCc
Confidence            4678889999999999999999999999876655431        23467899999999999999999999999999999


Q ss_pred             cEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          111 TIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       111 ~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      +..+.++++++                         ++|+++|.++.++.+
T Consensus        83 ~~~~~~~~~~~-------------------------~~g~~~a~~~~~~~~  108 (110)
T cd00586          83 KSFTFEQEIFR-------------------------EDGELLATAETVLVC  108 (110)
T ss_pred             EEEEEEEEEEC-------------------------CCCeEEEEEEEEEEE
Confidence            99999999997                         569999999999874

Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).

>cd03440 hot_dog The hotdog fold was initially identified in the E

Probab=99.18  E-value=3e-09  Score=69.92  Aligned_cols=96  Identities=18%  Similarity=0.249  Sum_probs=82.5

Q ss_pred             EEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc-CCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEE
Q 030085           39 GCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS-GFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQV  117 (183)
Q Consensus        39 ~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~-~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v  117 (183)
                      ..+++.+.+.+..+.+|||.+..++|.+....+.... .....+..+++++|++|+..|+.|.++.++...+++...+++
T Consensus         3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~   82 (100)
T cd03440           3 LRLTVTPEDIDGGGIVHGGLLLALADEAAGAAAARLGGRGLGAVTLSLDVRFLRPVRPGDTLTVEAEVVRVGRSSVTVEV   82 (100)
T ss_pred             EEEEeCHHHcCcCCccchHHHHHHHHHHHHHHHHHhccCCCeEEEEEEEeEEecCCCCCCEEEEEEEEEeccccEEEEEE
Confidence            4677888888999999999999999998766655432 135688999999999999999999999999999999999999


Q ss_pred             EEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEE
Q 030085          118 RLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTL  159 (183)
Q Consensus       118 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~  159 (183)
                      ++++                         .+|++++.+..++
T Consensus        83 ~~~~-------------------------~~~~~~~~~~~~~   99 (100)
T cd03440          83 EVRN-------------------------EDGKLVATATATF   99 (100)
T ss_pred             EEEC-------------------------CCCCEEEEEEEEe
Confidence            9997                         5689999987765

coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis.

>PLN02647 acyl-CoA thioesterase

Probab=99.16  E-value=1.1e-09  Score=101.11  Aligned_cols=113  Identities=12%  Similarity=0.077  Sum_probs=92.5

Q ss_pred             eCCEEEEEEEcCCCC------cCCCCcccHHHHHHHHHHHHHHHHHHhcCC-------ceeEEEEE-eEEEecCCCCCCE
Q 030085           33 TPERIIGCFRVTQNS------CQPFKVLHGGVSALIAESLASMGAHMASGF-------KRVAGVQL-TINHLKSAELGDL   98 (183)
Q Consensus        33 ~~g~v~~~m~v~~~~------~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~-------~~~vTv~l-~i~flrpa~~Gd~   98 (183)
                      .+-++.+.+++.++.      .|+.|.+|||.++.++|.+++++|..+...       ..+||+.+ +|+|++|+..|+.
T Consensus        84 ~~S~~~~~~~~~~d~~l~~~y~N~~G~l~gG~LLe~mD~~A~~~A~rh~~~~~~~~~p~~vVTAsVD~i~F~~Pi~~g~~  163 (437)
T PLN02647         84 SQSRTSILYKFSSDFILREQYRNPWNEVRIGKLLEDLDALAGTISVKHCSDDDSTTRPLLLVTASVDKIVLKKPIRVDVD  163 (437)
T ss_pred             ccceEEEEEecCCchhhchhhcCCCCcEeHhHHHHHHHHHHHHHHHHHhCCCcccCCcceEEEEEECcEEEcCCCcCCcE
Confidence            445788888655555      999999999999999999999999887643       16999999 7999999999999


Q ss_pred             EEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEec
Q 030085           99 VRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNL  163 (183)
Q Consensus        99 l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~  163 (183)
                      |.++|.|.+.||+...+.++++.+..                  ...+++..+++++..||..+-
T Consensus       164 v~l~g~Vt~vGrSSMEV~v~V~~~~~------------------~~~~~~~~~~~~a~FtfVA~D  210 (437)
T PLN02647        164 LKIVGAVTWVGRSSMEIQLEVIQPTK------------------DESNTSDSVALTANFTFVARD  210 (437)
T ss_pred             EEEEEEEEEecCCeEEEEEEEEEccc------------------cCCCCcEEEEEEEEEEEEEEc
Confidence            99999999999999999999997310                  000134578999999987544

>PF09500 YiiD_Cterm: Putative thioesterase (yiiD_Cterm); InterPro: IPR012660 This entry consists of a broadly distributed uncharacterised domain found often as a standalone protein

Probab=99.16  E-value=1.2e-09  Score=87.51  Aligned_cols=117  Identities=15%  Similarity=0.099  Sum_probs=84.4

Q ss_pred             CCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC----CceeEEEEEeEEEec
Q 030085           16 AVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG----FKRVAGVQLTINHLK   91 (183)
Q Consensus        16 ~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~----~~~~vTv~l~i~flr   91 (183)
                      ...-|+.++||+++.+.++++++++.|..++ .|..|+++||.+++++=.++...++....    ....|-.+-+|+|++
T Consensus         9 h~~IPls~~Mgi~v~~~~~~~l~~~APL~pN-~N~~~T~FgGSl~slatLaGW~lv~l~l~e~~~~~~IVi~~~~i~Y~~   87 (144)
T PF09500_consen    9 HEHIPLSKAMGIKVTSYTGQRLELSAPLAPN-INHHGTMFGGSLYSLATLAGWGLVWLQLKEAGLNGDIVIADSNIRYLK   87 (144)
T ss_dssp             HHH-HHHHHTT-EEEEEETTEEEEE--SGGG-B-TTSSB-HHHHHHHHHHHHHHHHHHHHHHHT---EEEEEEEEEEE-S
T ss_pred             HHhCChhhhcCcEEEEEcCCEEEEeccCCCC-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeCceEEcC
Confidence            3557999999999999999999999999995 89999999999999998776544444432    256889999999999


Q ss_pred             CCCCCCEEEEEEEEE-------------EeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEE
Q 030085           92 SAELGDLVRAVATPI-------------NLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVT  158 (183)
Q Consensus        92 pa~~Gd~l~a~a~vi-------------~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T  158 (183)
                      |+. +| ++|+|+.-             +.||--..++++|++                          +|+++|..+++
T Consensus        88 Pv~-~d-~~A~~~~~~~~~~~~~~~~l~~~grari~l~~~i~~--------------------------~~~~~a~f~G~  139 (144)
T PF09500_consen   88 PVT-GD-FTARCSLPEPEDWERFLQTLARGGRARITLEVEIYS--------------------------GGELAAEFTGR  139 (144)
T ss_dssp             ----S---EEEEE-------S---GGGGCTS-EEEEEEEEEEE--------------------------TTEEEEEEEEE
T ss_pred             CCC-CC-cEEEEeccccchhHHHHHHHHcCCcEEEEEEEEEEE--------------------------CCEEEEEEEEE
Confidence            999 63 88888876             567878888999996                          57899999999


Q ss_pred             EEE
Q 030085          159 LLC  161 (183)
Q Consensus       159 ~~~  161 (183)
                      |.+
T Consensus       140 yv~  142 (144)
T PF09500_consen  140 YVA  142 (144)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            984

The member from is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an N-terminal acetyltransferase domain (IPR000182 from INTERPRO). The function of these proteins are unknown. ; PDB: 1T82_C.

>PLN02647 acyl-CoA thioesterase

Probab=99.08  E-value=3.7e-09  Score=97.64  Aligned_cols=110  Identities=15%  Similarity=0.120  Sum_probs=86.5

Q ss_pred             EeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEE-eEEEecCCCCCCEEEEEEEEEEeCC
Q 030085           32 LTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL-TINHLKSAELGDLVRAVATPINLGK  110 (183)
Q Consensus        32 ~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrpa~~Gd~l~a~a~vi~~Gr  110 (183)
                      ..+-++....-+.|.+.|.+|.+|||.++.++|.+++++|..+.+ ..++|+.+ .|+|++|+..|+.|.++|.|+..|+
T Consensus       286 m~dT~~~~~~iv~P~d~N~~g~iFGG~LM~~~De~A~i~A~r~a~-~~~vt~svd~v~F~~PV~vGdil~l~A~V~yt~~  364 (437)
T PLN02647        286 IRDTRLENSLICQPQQRNIHGRIFGGFLMRRAFELAFSTAYAFAG-LRPYFLEVDHVDFLRPVDVGDFLRFKSCVLYTEL  364 (437)
T ss_pred             ccccceEEEEEeCccccCCCCcEeHHHHHHHHHHHHHHHHHHHcC-CceEEEEecceEecCccccCcEEEEEEEEEEEeE
Confidence            344567778889999999999999999999999999888877654 57999999 6999999999999999999998775


Q ss_pred             c-----EEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085          111 T-----IQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus       111 ~-----~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      +     ...+++.++-.+.                    .+..++++.++-.||.+.
T Consensus       365 ~s~g~~~i~veV~v~v~~~--------------------~~~~~~~~n~~~fTfva~  401 (437)
T PLN02647        365 ENSEQPLINVEVVAHVTRP--------------------ELRSSEVSNTFYFTFTVR  401 (437)
T ss_pred             EecCceEEEEEEEEEEEcC--------------------CCCcceEEEEEEEEEEEe
Confidence            4     4455555543110                    113457888999998853

>PRK10800 acyl-CoA thioesterase YbgC; Provisional

Probab=98.84  E-value=4.9e-07  Score=68.74  Aligned_cols=103  Identities=13%  Similarity=0.104  Sum_probs=85.7

Q ss_pred             EEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc--------CCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeC
Q 030085           38 IGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS--------GFKRVAGVQLTINHLKSAELGDLVRAVATPINLG  109 (183)
Q Consensus        38 ~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~--------~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~G  109 (183)
                      ..+.+++...+++.|.+|=+.+..+++.|.........        .+...+.++++++|++|+..||.|.++.++.+.|
T Consensus         4 ~~~~~Vr~~d~D~~Ghv~~~~y~~~~e~a~~~~~~~~g~~~~~~~~~~~~~~v~~~~i~y~~~~~~~d~i~v~t~v~~~~   83 (130)
T PRK10800          4 RWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHFSQQALLAERVAFVVRKMTVEYYAPARLDDMLEVQSEITSMR   83 (130)
T ss_pred             EEEEEEeehhcCCCCeEehHHHHHHHHHHHHHHHHHcCCCHHHHHhCCCEEEEEEEEEEEcCcccCCCEEEEEEEEEeeC
Confidence            45677888899999999999999999988654332221        1245788999999999999999999999999999


Q ss_pred             CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCC
Q 030085          110 KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPV  165 (183)
Q Consensus       110 r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~  165 (183)
                      ++...+..++++                         .+|+++|.+..++.+.-..
T Consensus        84 ~~s~~~~~~i~~-------------------------~~g~~~a~~~~~~v~~d~~  114 (130)
T PRK10800         84 GTSLTFTQRIVN-------------------------AEGTLLNEAEVLIVCVDPL  114 (130)
T ss_pred             cEEEEEEEEEEc-------------------------CCCeEEEEEEEEEEEEECC
Confidence            998888989997                         6799999999999876443

>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B

Probab=98.83  E-value=6.2e-08  Score=80.94  Aligned_cols=82  Identities=18%  Similarity=0.189  Sum_probs=64.0

Q ss_pred             CCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCC
Q 030085           51 FKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDG  130 (183)
Q Consensus        51 ~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~  130 (183)
                      .+.+|||++++++=.|+    ....+........++++||+|+..| .++++++++|.||+++.++++++.         
T Consensus         9 g~~~~GG~~a~~~~~A~----~~~~~~~~~~~~s~~~~fl~p~~~~-~~~~~v~~~r~Gr~~~~~~v~~~q---------   74 (255)
T PF13622_consen    9 GRVVHGGYLAQLLAAAA----RTHAPPPGFDPHSLHVYFLRPVPPG-PVEYRVEVLRDGRSFSTRQVELSQ---------   74 (255)
T ss_dssp             TTCE-HHHHHHHHHHHH----HHCHTTTSSEEEEEEEEESS--BSC-EEEEEEEEEEESSSEEEEEEEEEE---------
T ss_pred             CCcChhHHHHHHHHHHH----HHhccCCCCceEEEEeEeccccccC-CEEEEEEEeeCCCcEEEEEEEEEE---------
Confidence            67899998887776543    2222223478899999999999999 999999999999999999999995         


Q ss_pred             CCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEec
Q 030085          131 RDHDADHHHHNNSTSSSSSIMISSSTVTLLCNL  163 (183)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~  163 (183)
                                       +|++++.++++|...-
T Consensus        75 -----------------~~~~~~~a~~~f~~~~   90 (255)
T PF13622_consen   75 -----------------DGKVVATATASFGRPE   90 (255)
T ss_dssp             -----------------TTEEEEEEEEEEE--T
T ss_pred             -----------------CCcCEEEEEEEEccCc
Confidence                             5889999999998443

>cd03445 Thioesterase_II_repeat2 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively

Probab=98.81  E-value=8.1e-08  Score=70.92  Aligned_cols=80  Identities=14%  Similarity=0.108  Sum_probs=67.3

Q ss_pred             CCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCC
Q 030085           50 PFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDD  129 (183)
Q Consensus        50 p~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~  129 (183)
                      +.+.+|||.+++++-.|+.    ...+ .......++.+|++|+..+.++..+.++++.||+++..+++++.        
T Consensus        14 ~~~~~~GG~l~a~a~~Aa~----~~~~-~~~~~~s~~~~Fl~p~~~~~pv~~~v~~lr~GRs~~~~~V~~~Q--------   80 (94)
T cd03445          14 QGRGVFGGQVLAQALVAAA----RTVP-DDRVPHSLHSYFLRPGDPDQPIEYEVERLRDGRSFATRRVRAVQ--------   80 (94)
T ss_pred             CCCceEHHHHHHHHHHHHH----hhCC-CCCCeEEEEEEecCCCCCCCCEEEEEEEEECCCcEEEEEEEEEE--------
Confidence            5789999999999987643    2223 23557799999999999866899999999999999999999985        


Q ss_pred             CCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          130 GRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                                        +|+++..++++|-
T Consensus        81 ------------------~g~~~~~a~~sf~   93 (94)
T cd03445          81 ------------------NGKVIFTATASFQ   93 (94)
T ss_pred             ------------------CCEEEEEEEEEEe
Confidence                              5899999999884

TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.

>TIGR02799 thio_ybgC tol-pal system-associated acyl-CoA thioesterase

Probab=98.79  E-value=4.3e-07  Score=67.91  Aligned_cols=100  Identities=15%  Similarity=0.099  Sum_probs=82.5

Q ss_pred             EEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc--------C-CceeEEEEEeEEEecCCCCCCEEEEEEEEEEeC
Q 030085           39 GCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS--------G-FKRVAGVQLTINHLKSAELGDLVRAVATPINLG  109 (183)
Q Consensus        39 ~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~--------~-~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~G  109 (183)
                      ..+++....+++.|.+|.+.+..+++.+.........        . +...+.++++++|++|++.||.|.+++++.+.|
T Consensus         3 ~~~~vr~~d~D~~Ghv~~~~y~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~vv~~~~i~y~~~~~~gd~v~v~~~v~~~~   82 (126)
T TIGR02799         3 WPIRVYYEDTDAGGVVYHANYLKFMERARTEWLRALGFEQSALLEETGLVFVVRSMELDYLKPARLDDLLTVTTRVVELK   82 (126)
T ss_pred             ceEEEEEeccCCCceEEechHHHHHHHHHHHHHHHcCCCHHHHhhcCCcEEEEEEEEEEEcCcccCCCEEEEEEEEEecC
Confidence            4577888999999999999999999977543332211        1 234678899999999999999999999999999


Q ss_pred             CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecC
Q 030085          110 KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLP  164 (183)
Q Consensus       110 r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p  164 (183)
                      ++...++.++++                          +|+++|.+..++.+.-+
T Consensus        83 ~~~~~~~~~i~~--------------------------~g~~~a~~~~~~v~vd~  111 (126)
T TIGR02799        83 GASLVFAQEVRR--------------------------GDTLLCEATVEVACVDA  111 (126)
T ss_pred             ceEEEEEEEEEe--------------------------CCEEEEEEEEEEEEEEC
Confidence            999999999995                          47899999999876544

The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import o

>KOG4781 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.71  E-value=6.7e-08  Score=82.68  Aligned_cols=89  Identities=15%  Similarity=0.059  Sum_probs=76.7

Q ss_pred             eCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcE
Q 030085           33 TPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTI  112 (183)
Q Consensus        33 ~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~  112 (183)
                      ..+..++-+......+++-|.+|||++||++|.+.++++....+.+..+|.+|+++|-+|+.....+.+++.+.+.-.|-
T Consensus       123 s~~e~v~i~h~G~~L~gy~~~iHgG~IATllde~L~~c~fl~~pnk~~vTanLsisy~~pip~~~f~vi~t~~~~~~Grk  202 (237)
T KOG4781|consen  123 SHREMVVIFHLGKDLTGYPGLVHGGAIATLLDEALAMCAFLALPNKIGVTANLSISYKRPIPTNHFVVIRTQLDKVEGRK  202 (237)
T ss_pred             CCCeEEEEEeccccccCCCCccchHHHHHHHHHHHHHhhcccCCchhheeeecccccCCCcccceEEEEecchhhhcCcc
Confidence            35678888999999999999999999999999999999988777789999999999999999998888999988775544


Q ss_pred             EEEEEEEEE
Q 030085          113 QVWQVRLWK  121 (183)
Q Consensus       113 ~~~~v~i~~  121 (183)
                      +-..+++..
T Consensus       203 ~~~~g~l~~  211 (237)
T KOG4781|consen  203 CKTFGELNV  211 (237)
T ss_pred             cceeeEEEE
Confidence            555555554

>cd03449 R_hydratase (R)-hydratase [(R)-specific enoyl-CoA hydratase] catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway

Probab=98.66  E-value=1e-06  Score=65.69  Aligned_cols=81  Identities=12%  Similarity=0.102  Sum_probs=66.0

Q ss_pred             CCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCC--cEEEEEEEEEEcccccCC
Q 030085           51 FKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGK--TIQVWQVRLWKVKEVQSD  128 (183)
Q Consensus        51 ~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr--~~~~~~v~i~~~~~~~~~  128 (183)
                      .-.+||..++++++.+++.    ..++...+....+++|++|+..||+|+++++++....  .+..+++++++       
T Consensus        45 ~~i~~g~~~~~~~~~~~~~----~~~g~~~~~~~~~~~f~~Pv~~gd~l~~~~~v~~~~~~~~~v~~~~~~~~-------  113 (128)
T cd03449          45 GRIAHGMLTASLISAVLGT----LLPGPGTIYLSQSLRFLRPVFIGDTVTATVTVTEKREDKKRVTLETVCTN-------  113 (128)
T ss_pred             CceecHHHHHHHHHHHHhc----cCCCceEEEEEEEEEECCCccCCCEEEEEEEEEEEecCCCEEEEEEEEEe-------
Confidence            4599999999998765321    2233456677889999999999999999999997655  78889999998       


Q ss_pred             CCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          129 DGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                                        ++|++++.++.+.+
T Consensus       114 ------------------~~g~~v~~g~~~~~  127 (128)
T cd03449         114 ------------------QNGEVVIEGEAVVL  127 (128)
T ss_pred             ------------------CCCCEEEEEEEEEe
Confidence                              67999999999876

(R)-hydratase contains a hot-dog fold similar to those of thioesterase II, and beta-hydroxydecanoyl-ACP dehydratase, MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit. The active site lies within a substrate-binding tunnel formed by the (R)-hydratase homodimer. A subset of the bacterial (R)-hydratases contain a C-terminal phosphotransacetylase (PTA) domain.

>COG0824 FcbC Predicted thioesterase [General function prediction only]

Probab=98.65  E-value=2.9e-06  Score=66.41  Aligned_cols=104  Identities=15%  Similarity=0.130  Sum_probs=87.7

Q ss_pred             EEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHh-c-------CCceeEEEEEeEEEecCCCCCCEEEEEEEEEE
Q 030085           36 RIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMA-S-------GFKRVAGVQLTINHLKSAELGDLVRAVATPIN  107 (183)
Q Consensus        36 ~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~-~-------~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~  107 (183)
                      .....+++....++.+|.+|=+....+.|.|-.--.... .       .+...+.++++++|++|++.||.++++.++.+
T Consensus         5 ~~~~~~~V~~~d~D~~GhV~~a~Yl~~fE~ar~~~l~~~g~~~~~~~~~~~~~~v~~~~i~y~~p~~~~d~l~v~~~v~~   84 (137)
T COG0824           5 PFSTPIRVRYEDTDAMGHVNNANYLVFFEEARTEFLRALGFDYADLEEGGIAFVVVEAEIDYLRPARLGDVLTVRTRVEE   84 (137)
T ss_pred             ceEEEEEEEhhhcCcccEEecchHHHHHHHHHHHHHHHcCCCHHHHhhCCcEEEEEEEEeEECCCccCCCEEEEEEEEEe
Confidence            456778888999999999999999999999854333221 0       11348999999999999999999999999999


Q ss_pred             eCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCC
Q 030085          108 LGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPV  165 (183)
Q Consensus       108 ~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~  165 (183)
                      .|++...++-+|++                         ++ +++|+|+.+..|+-+.
T Consensus        85 ~~~~s~~~~~~i~~-------------------------~~-~l~a~~~~~~V~v~~~  116 (137)
T COG0824          85 LGGKSLTLGYEIVN-------------------------ED-ELLATGETTLVCVDLK  116 (137)
T ss_pred             ecCeEEEEEEEEEe-------------------------CC-EEEEEEEEEEEEEECC
Confidence            99999999999998                         44 9999999999987654

>TIGR00051 acyl-CoA thioester hydrolase, YbgC/YbaW family

Probab=98.58  E-value=1.9e-06  Score=63.03  Aligned_cols=81  Identities=14%  Similarity=0.044  Sum_probs=67.7

Q ss_pred             EEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHh--------cCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcE
Q 030085           41 FRVTQNSCQPFKVLHGGVSALIAESLASMGAHMA--------SGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTI  112 (183)
Q Consensus        41 m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~--------~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~  112 (183)
                      +.+....+++.|.+|-+.++.+++.+...-....        ..+...+.++++++|++|++.||.|.++.++.+.|++.
T Consensus         2 ~~V~~~d~D~~G~v~~~~y~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~v~~~~i~y~~~~~~gd~v~v~~~~~~~~~~s   81 (117)
T TIGR00051         2 VRVYYEDTDAQGIVYHANYLRYCERARTEFLRSLGFPQSVLRAEGVAFVVVNINIEYKKPARLDDVLEIRTQIEELNGFS   81 (117)
T ss_pred             EEEEEeccCCCcEEEehHHHHHHHHHHHHHHHHcCCCHHHHHhCCCEEEEEEEEEEECCcccCCCEEEEEEEEEecCcEE
Confidence            4567788999999999999999998854332221        11234689999999999999999999999999999999


Q ss_pred             EEEEEEEEE
Q 030085          113 QVWQVRLWK  121 (183)
Q Consensus       113 ~~~~v~i~~  121 (183)
                      ..++.++++
T Consensus        82 ~~~~~~i~~   90 (117)
T TIGR00051        82 FVFSQEIFN   90 (117)
T ss_pred             EEEEEEEEe
Confidence            999999998

This model describes a subset of related acyl-CoA thioesterases that include several at least partially characterized proteins. YbgC is an acyl-CoA thioesterase associated with the Tol-Pal system. YbaW is part of the FadM regulon.

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=98.33  E-value=1.2e-05  Score=74.90  Aligned_cols=105  Identities=10%  Similarity=-0.021  Sum_probs=87.7

Q ss_pred             CEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc-------CCceeEEEEEeEEEecCCCCCCEEEEEEEEEE
Q 030085           35 ERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS-------GFKRVAGVQLTINHLKSAELGDLVRAVATPIN  107 (183)
Q Consensus        35 g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~-------~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~  107 (183)
                      -..+.++++.+.+++++|.++=+.+..++|.+..-......       .+...+.++.+|+|++|++.||.|.++.++.+
T Consensus       344 ~~~~~~~~V~~~~~D~~Ghvnn~~Yl~~~e~Ar~~~~~~~G~~~~~~~~~~~~vvv~~~i~y~rp~~~gD~v~I~t~v~~  423 (495)
T PRK07531        344 PLRLVETKVPPAWVDYNGHMTEHRYLQVFGDTTDALLRLIGVDAAYVAAGHSYYTVETHIRHLGEAKAGQALHVETQLLS  423 (495)
T ss_pred             ceEEEeEEECHHHcCCCCeEcHHHHHHHHHHHHHHHHHHcCCCHHHHhcCCcEEEEEEEEEEcccCCCCCEEEEEEEEEe
Confidence            34577899999999999999999999999987543222211       12345789999999999999999999999999


Q ss_pred             eCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecC
Q 030085          108 LGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLP  164 (183)
Q Consensus       108 ~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p  164 (183)
                      .|++...++.++++                         ++|+++|.+..++.+.-.
T Consensus       424 ~~~~s~~~~~~i~~-------------------------~~g~l~A~g~~~~v~vD~  455 (495)
T PRK07531        424 GDEKRLHLFHTLYD-------------------------AGGELIATAEHMLLHVDL  455 (495)
T ss_pred             cCCcEEEEEEEEEC-------------------------CCCcEEEEEEEEEEEEEC
Confidence            99999999999997                         678999999999887553

>TIGR00189 tesB acyl-CoA thioesterase II

Probab=98.32  E-value=4.7e-06  Score=70.83  Aligned_cols=78  Identities=10%  Similarity=0.042  Sum_probs=63.6

Q ss_pred             CcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCC
Q 030085           52 KVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGR  131 (183)
Q Consensus        52 G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~  131 (183)
                      +.++||.+++++=.|+   ..+ .+. ...-.+++++|++|+..+..|..+.+++|.||+++..+++++.          
T Consensus        21 ~~~fGG~~~Aqal~Aa---~~t-v~~-~~~~~S~h~~Fl~~~~~~~pv~~~V~~lR~GRs~~~r~V~~~Q----------   85 (271)
T TIGR00189        21 NRVFGGQVVGQALAAA---SKT-VPE-EFIPHSLHSYFVRAGDPKKPIIYDVERLRDGRSFITRRVKAVQ----------   85 (271)
T ss_pred             CceEccHHHHHHHHHH---Hhc-CCC-CCCcceeEEEecCCCCCCCCEEEEEEEeeCCCceEEEEEEEEE----------
Confidence            5899999999875432   222 232 2333479999999999988899999999999999999999984          


Q ss_pred             CCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          132 DHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       132 ~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                                      +|++|.+++++|.
T Consensus        86 ----------------~g~~~~~a~asf~   98 (271)
T TIGR00189        86 ----------------HGKTIFTLQASFQ   98 (271)
T ss_pred             ----------------CCEEEEEEEEEcc
Confidence                            5899999999986

Subunit: homotetramer.

>PF13279 4HBT_2: Thioesterase-like superfamily; PDB: 2W3X_E 3CK1_A 2GF6_C 2NUJ_A 2HLJ_A 2XFL_B 2XEM_B 2OIW_B 2HX5_A 2FUJ_A

Probab=98.30  E-value=9.8e-05  Score=54.81  Aligned_cols=96  Identities=6%  Similarity=-0.017  Sum_probs=71.4

Q ss_pred             CCCCcCCCCcccHHHHHHHHHHHHHHHHHH-----hc--CCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEE
Q 030085           44 TQNSCQPFKVLHGGVSALIAESLASMGAHM-----AS--GFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQ  116 (183)
Q Consensus        44 ~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~-----~~--~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~  116 (183)
                      ++..++ +|.+|=+....++|.|-.--...     ..  .+...+.++.+++|++|++.||.+.++.++.+.|++...++
T Consensus         2 r~~D~D-~ghv~n~~Y~~~~e~ar~~~~~~~g~~~~~~~~~~~~~v~~~~i~y~~~~~~~d~~~v~~~~~~~~~~s~~~~   80 (121)
T PF13279_consen    2 RWSDTD-NGHVNNARYLRYFEEAREEFLEELGLYDELQGQGIGFVVAESEIDYLRPLRFGDRLEVETRVEEIGGKSFRFE   80 (121)
T ss_dssp             -GGGB--TSSB-HHHHHHHHHHHHHHHHHHHTSCHHHTTTTEEEEEEEEEEEE-S--BTTSEEEEEEEEEEEESSEEEEE
T ss_pred             CHHHcc-CCeEcHHHHHHHHHHHHHHHHHhcchhhHHHhcCceEEEEEEEEEEcccccCCCEEEEEEEEEEECCcEEEEE
Confidence            456688 99999999999999874332211     11  13478999999999999999999999999999999999999


Q ss_pred             EEEEEcccccCCCCCCCCCCCCcCCCCCCCCCC--cEEEEEEEEEEEecC
Q 030085          117 VRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSS--IMISSSTVTLLCNLP  164 (183)
Q Consensus       117 v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~lvA~~t~T~~~~~p  164 (183)
                      .++++.                        .+|  +++|.++.++.+.-.
T Consensus        81 ~~i~~~------------------------~~g~~~~~a~~~~~~v~~d~  106 (121)
T PF13279_consen   81 QEIFRP------------------------ADGKGELAATGRTVMVFVDY  106 (121)
T ss_dssp             EEEEEC------------------------STTEEEEEEEEEEEEEEEET
T ss_pred             EEEEEc------------------------CCCceEEEEEEEEEEEEEeC
Confidence            999972                        244  559999999886544

...

>cd01288 FabZ FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway

Probab=98.30  E-value=0.00012  Score=54.87  Aligned_cols=108  Identities=16%  Similarity=0.122  Sum_probs=77.8

Q ss_pred             EEEEEeC-CEEEEEEEcCCCC--cCC----CCcccHHHHHHHHHHHHHHHHHHhc---CCceeEEEEE-eEEEecCCCCC
Q 030085           28 ELEELTP-ERIIGCFRVTQNS--CQP----FKVLHGGVSALIAESLASMGAHMAS---GFKRVAGVQL-TINHLKSAELG   96 (183)
Q Consensus        28 ~~~~~~~-g~v~~~m~v~~~~--~Np----~G~lHGG~~a~LaD~A~g~a~~~~~---~~~~~vTv~l-~i~flrpa~~G   96 (183)
                      ++.++++ +.++....+.+++  ...    ...++|=++.-++.-++++......   .+.......+ ++.|.+|+.+|
T Consensus        12 ~i~~~~~~~~~~~~~~v~~d~~~~~~hf~~~pi~Pg~l~iE~~aQ~~~~~~~~~~~~~~~~~~~l~~~~~~kf~~pv~pg   91 (131)
T cd01288          12 RVLELEPGKSIVAIKNVTINEPFFQGHFPGNPIMPGVLIIEALAQAAGILGLKSLEDFEGKLVYFAGIDKARFRKPVVPG   91 (131)
T ss_pred             EEEEEcCCCEEEEEEEecCCChhhcCCCCCCCcCCchHHHHHHHHHHHHHhhhcccccCCcEEEEeeecccEEccccCCC
Confidence            4556664 6788888877764  221    2677876665555555544432211   2234444554 79999999999


Q ss_pred             CEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           97 DLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        97 d~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      |+|++++++++.+++...++++++.                          +|+++++++.+++.
T Consensus        92 d~l~i~~~v~~~~~~~~~~~~~~~~--------------------------~g~~v~~~~~~~~~  130 (131)
T cd01288          92 DQLILEVELLKLRRGIGKFKGKAYV--------------------------DGKLVAEAELMFAI  130 (131)
T ss_pred             CEEEEEEEEEEeeCCEEEEEEEEEE--------------------------CCEEEEEEEEEEEE
Confidence            9999999999999999999999974                          58999999999873

>PRK00006 fabZ (3R)-hydroxymyristoyl-ACP dehydratase; Reviewed

Probab=98.22  E-value=0.00022  Score=55.48  Aligned_cols=108  Identities=16%  Similarity=0.090  Sum_probs=75.4

Q ss_pred             EEEEEeC-CEEEEEEEcCCCCc--C----CCCcccHHHHHHHHHHHHHHHHHHhc--CCceeEEEEE-eEEEecCCCCCC
Q 030085           28 ELEELTP-ERIIGCFRVTQNSC--Q----PFKVLHGGVSALIAESLASMGAHMAS--GFKRVAGVQL-TINHLKSAELGD   97 (183)
Q Consensus        28 ~~~~~~~-g~v~~~m~v~~~~~--N----p~G~lHGG~~a~LaD~A~g~a~~~~~--~~~~~vTv~l-~i~flrpa~~Gd   97 (183)
                      ++.++++ ++++....+..++.  .    ....++|=.+.-++--++++.+....  .+.....+.+ ++.|++|+.+||
T Consensus        27 ~i~~~~~~~~~~~~~~v~~d~~~~~ghfp~~pi~PG~l~iE~~aQ~~~~~~~~~~~~~~~~~~l~gi~~~kF~~pv~pGd  106 (147)
T PRK00006         27 RVLELEPGKSIVAIKNVTINEPFFQGHFPGYPVMPGVLIIEAMAQAAGVLALKSEENKGKLVYFAGIDKARFKRPVVPGD  106 (147)
T ss_pred             EEEEEcCCCEEEEEEEecCCCccccCCCcCCCcCchhHHHHHHHHHHHHHHhcCcCcCCcEEEEeeeeEEEEccccCCCC
Confidence            4556665 67888888877652  2    13457775554334444333222211  1223334444 799999999999


Q ss_pred             EEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           98 LVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        98 ~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      +|++++++....+.+..++++++.                          +|++++.++.++++
T Consensus       107 ~l~i~~~i~~~~~~~v~~~~~~~~--------------------------~g~~v~~~~~~~~~  144 (147)
T PRK00006        107 QLILEVELLKQRRGIWKFKGVATV--------------------------DGKLVAEAELMFAI  144 (147)
T ss_pred             EEEEEEEEEEeeCCEEEEEEEEEE--------------------------CCEEEEEEEEEEEE
Confidence            999999999999999999999974                          58999999999984

>cd03441 R_hydratase_like (R)-hydratase [(R)-specific enoyl-CoA hydratase]

Probab=97.96  E-value=0.0002  Score=52.94  Aligned_cols=81  Identities=12%  Similarity=0.063  Sum_probs=62.4

Q ss_pred             CCCcccHHHHHHHHHHHHHHHHHHhcCC-ceeEEEEEeEEEecCCCCCCEEEEEEEEEEeC----CcEEEEEEEEEEccc
Q 030085           50 PFKVLHGGVSALIAESLASMGAHMASGF-KRVAGVQLTINHLKSAELGDLVRAVATPINLG----KTIQVWQVRLWKVKE  124 (183)
Q Consensus        50 p~G~lHGG~~a~LaD~A~g~a~~~~~~~-~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~G----r~~~~~~v~i~~~~~  124 (183)
                      +.-.+||..+++++..+....    .+. ........++.|.+|+..||+|++++++...-    +.+..+++++.+   
T Consensus        41 ~~~i~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~f~~Pv~~Gd~l~~~~~v~~~~~~~~~~~v~~~~~~~n---  113 (127)
T cd03441          41 GGRIAHGMLTLSLASGLLVQW----LPGTDGANLGSQSVRFLAPVFPGDTLRVEVEVLGKRPSKGRGVVTVRTEARN---  113 (127)
T ss_pred             CCceechHHHHHHHHhhhhhh----ccCcccceeEEeEEEEeCCcCCCCEEEEEEEEEEeeccCCCcEEEEEEEEEe---
Confidence            456899999999988764321    222 34667788999999999999999999999763    357788888887   


Q ss_pred             ccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEE
Q 030085          125 VQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTL  159 (183)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~  159 (183)
                                            ++|+++..++.+.
T Consensus       114 ----------------------~~g~~v~~g~~~~  126 (127)
T cd03441         114 ----------------------QGGEVVLSGEATV  126 (127)
T ss_pred             ----------------------CCCCEEEEEEEEe
Confidence                                  6788888777653

Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.

>PRK10526 acyl-CoA thioesterase II; Provisional

Probab=97.92  E-value=0.00015  Score=63.23  Aligned_cols=103  Identities=12%  Similarity=0.038  Sum_probs=76.7

Q ss_pred             chhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEE
Q 030085           20 APLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLV   99 (183)
Q Consensus        20 p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l   99 (183)
                      .|.+.|.+  +.++++..+..-+     -.....++||.+++.+=.|+   ..+ .+ ....--++++.||+|+..+.+|
T Consensus         7 ~l~~~l~l--~~~~~~~f~g~~~-----~~~~r~~fGGqv~AQal~AA---~~t-v~-~~~~~hSlh~~Fl~pg~~~~pi   74 (286)
T PRK10526          7 NLLTLLNL--EKIEEGLFRGQSE-----DLGLRQVFGGQVVGQALYAA---KET-VP-EERLVHSFHSYFLRPGDSQKPI   74 (286)
T ss_pred             HHHHhcCc--EEccCCeEECcCC-----CCCCCceechHHHHHHHHHH---Hhc-CC-CCCCceEEEEEcCCCCCCCCCE
Confidence            46666544  4666665554422     13357899999998875432   222 22 2245568999999999988889


Q ss_pred             EEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          100 RAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       100 ~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      ..+.+.+|.||+.+..+|+++.                          +|++|.++++.|.
T Consensus        75 ~y~Ve~lRdGRSfstr~V~a~Q--------------------------~g~~if~~~~sF~  109 (286)
T PRK10526         75 IYDVETLRDGNSFSARRVAAIQ--------------------------NGKPIFYMTASFQ  109 (286)
T ss_pred             EEEEEEEeCCCceEeEEEEEEE--------------------------CCEEEEEEEEEec
Confidence            9999999999999999999994                          6899999999986

>cd03455 SAV4209 SAV4209 is a Streptomyces avermitilis protein with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit

Probab=97.90  E-value=0.00033  Score=52.93  Aligned_cols=77  Identities=12%  Similarity=0.022  Sum_probs=57.9

Q ss_pred             cccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCc-EEEEEEEEEEcccccCCCCC
Q 030085           53 VLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKT-IQVWQVRLWKVKEVQSDDGR  131 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~-~~~~~v~i~~~~~~~~~~~~  131 (183)
                      .+||...++++..+..    ...+ ....-..++++|++|+..||+|+++++|...... +..+++++.|          
T Consensus        45 ia~G~~~~~~~~~~~~----~~~~-~~~~~~~~~~rf~~pv~~Gdtl~~~~~v~~~~~~~~v~~~~~~~n----------  109 (123)
T cd03455          45 YVNGPTLAGLVIRYVT----DWAG-PDARVKSFAFRLGAPLYAGDTLRFGGRVTAKRDDEVVTVELWARN----------  109 (123)
T ss_pred             EEEHHHHHHHHHHHHH----HccC-CcceEEEEEEEeeccccCCCEEEEEEEEEeeccCcEEEEEEEEEc----------
Confidence            5899999999876532    1122 1234456799999999999999999999854222 7777888887          


Q ss_pred             CCCCCCCcCCCCCCCCCCcEEEEEEEEE
Q 030085          132 DHDADHHHHNNSTSSSSSIMISSSTVTL  159 (183)
Q Consensus       132 ~~~~~~~~~~~~~~~~~g~lvA~~t~T~  159 (183)
                                     ++|+++..++++.
T Consensus       110 ---------------q~G~~v~~g~a~v  122 (123)
T cd03455         110 ---------------SEGDHVMAGTATV  122 (123)
T ss_pred             ---------------CCCCEEEeEEEEE
Confidence                           7899999998875

The alpha- and gamma-proteobacterial members of this CD have, in addition to a hot dog fold, an N-terminal extension.

>cd03453 SAV4209_like SAV4209_like

Probab=97.82  E-value=0.00075  Score=51.33  Aligned_cols=78  Identities=12%  Similarity=0.046  Sum_probs=57.8

Q ss_pred             CcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEE----eCCcEEEEEEEEEEcccccC
Q 030085           52 KVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPIN----LGKTIQVWQVRLWKVKEVQS  127 (183)
Q Consensus        52 G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~----~Gr~~~~~~v~i~~~~~~~~  127 (183)
                      =.+||-.+++++..+.   .. ..+.. ..-+++.+.|++|+.+||+|+++++|+.    .|+.+..++++++|      
T Consensus        45 ~i~~G~~~~~~~~~~~---~~-~~~~~-~~i~~~~~rf~~Pv~~Gdtl~~~~~v~~~~~~~~~~~v~~~~~~~n------  113 (127)
T cd03453          45 VIAHGMLTMGLLGRLV---TD-WVGDP-GRVVSFGVRFTKPVPVPDTLTCTGIVVEKTVADGEDALTVTVDATD------  113 (127)
T ss_pred             cEecHHHHHHHHHHHH---HH-HcCCc-cceEEEEEEECCcCcCCCEEEEEEEEEEEEecCCCcEEEEEEEEEE------
Confidence            3789999888885432   11 22321 1225778999999999999999999974    25678889999998      


Q ss_pred             CCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEE
Q 030085          128 DDGRDHDADHHHHNNSTSSSSSIMISSSTVTL  159 (183)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~  159 (183)
                                         ++|+++..++++.
T Consensus       114 -------------------q~g~~v~~g~a~v  126 (127)
T cd03453         114 -------------------QAGGKKVLGRAIV  126 (127)
T ss_pred             -------------------cCCCEEEEEEEEE
Confidence                               6788888887654

Similar in sequence to the Streptomyces avermitilis SAV4209 protein, with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.

>PLN02868 acyl-CoA thioesterase family protein

Probab=97.81  E-value=0.00016  Score=65.69  Aligned_cols=105  Identities=14%  Similarity=0.031  Sum_probs=75.5

Q ss_pred             chhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEE
Q 030085           20 APLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLV   99 (183)
Q Consensus        20 p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l   99 (183)
                      .+.+.+.  ++.++++.-+...+...   ...+.++||.+++++=.|    +....+. ...-..+++.||+|+..+.++
T Consensus       131 ~l~~~~~--l~~~~~~~f~~~~~~~~---~~~~~~fGG~~~aqal~A----a~~~~~~-~~~~~s~~~~Fl~~~~~~~pv  200 (413)
T PLN02868        131 LVERILH--LEPLEVDIFRGITLPDA---PTFGKVFGGQLVGQALAA----ASKTVDP-LKLVHSLHAYFLLVGDINLPI  200 (413)
T ss_pred             HHHhhcC--cEeccCCeEECCcCCCC---cccccccchHHHHHHHHH----HHccCCC-CCCceEeeeeecCCCCCCCCE
Confidence            4455554  44666766555543221   235789999999985433    2222222 234568899999999886689


Q ss_pred             EEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          100 RAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       100 ~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      ..+.+++|.||+.+..+|+++.                          +|+++.+++++|.
T Consensus       201 ~~~V~~lr~Grs~~~r~v~~~Q--------------------------~g~~~~~~~~sf~  235 (413)
T PLN02868        201 IYQVERIRDGHNFATRRVDAIQ--------------------------KGKVIFTLFASFQ  235 (413)
T ss_pred             EEEEEEEcCCCceEeeEEEEEE--------------------------CCeeEEEEeeccc
Confidence            9999999999999999999984                          5899999998875

>TIGR01750 fabZ beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ

Probab=97.80  E-value=0.002  Score=49.59  Aligned_cols=107  Identities=19%  Similarity=0.125  Sum_probs=71.5

Q ss_pred             EEEEEe-CCEEEEEEEcCCCCc--C---CCCcccHHHHH--HHHHHHHHHHHHHhc--CC--ceeEEEEE-eEEEecCCC
Q 030085           28 ELEELT-PERIIGCFRVTQNSC--Q---PFKVLHGGVSA--LIAESLASMGAHMAS--GF--KRVAGVQL-TINHLKSAE   94 (183)
Q Consensus        28 ~~~~~~-~g~v~~~m~v~~~~~--N---p~G~lHGG~~a--~LaD~A~g~a~~~~~--~~--~~~vTv~l-~i~flrpa~   94 (183)
                      ++.+++ +++++.+..+++++-  .   |..-+-=|++.  +++-.++.++.....  ..  .......+ ++.|.+|+.
T Consensus        20 ~i~~~~~~~~~~~~~~v~~~~~~f~gHFp~~pv~Pg~l~iE~~aQ~~~~~~~~~~~~~~~~~~~~~l~~~~~~kF~~~v~   99 (140)
T TIGR01750        20 RILELDPGKRIVAIKNVTINEPFFQGHFPEKPIMPGVLIVEALAQAGGVLAILSLGGEIGKGKLVYFAGIDKAKFRRPVV   99 (140)
T ss_pred             EEEEEcCCCEEEEEEEcCCCCCeecCCCcCcCcChHHHHHHHHHHHHHHHheccccccCCCCcEEEEeecceeEECCccC
Confidence            566667 478999998888752  2   11122334332  233333322211111  11  23445555 899999999


Q ss_pred             CCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085           95 LGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus        95 ~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      +||+|++++++.+..+.+..++++++                          .+|+++|.++.+++
T Consensus       100 pGd~l~i~~~i~~~~~~~~~~~~~~~--------------------------~~g~~va~~~~~~~  139 (140)
T TIGR01750       100 PGDQLILHAEFLKKRRKIGKFKGEAT--------------------------VDGKVVAEAEITFA  139 (140)
T ss_pred             CCCEEEEEEEEEEccCCEEEEEEEEE--------------------------ECCEEEEEEEEEEE
Confidence            99999999999999999999999996                          36899999999886

This enzyme, FabZ, shows overlapping substrate specificity with FabA with regard to chain length in fatty acid biosynthesis. FabZ works preferentially on shorter chains and is often designated (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase, although its actual specificity is broader. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains.

>cd03447 FAS_MaoC FAS_MaoC, the MaoC-like hot dog fold of the fatty acid synthase, beta subunit

Probab=97.75  E-value=0.0012  Score=50.86  Aligned_cols=81  Identities=11%  Similarity=0.090  Sum_probs=60.1

Q ss_pred             CcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCC
Q 030085           52 KVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGR  131 (183)
Q Consensus        52 G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~  131 (183)
                      =.+||-..++++-.+.+  . ...++....-..++++|++|+..||+|+++.+++..-.....+++++++          
T Consensus        43 ~iahG~l~~~~~~~~~~--~-~~~~~~~~~~~~~~~rf~~PV~~gdtl~~~~~v~~~~~~~~~~~~~~~n----------  109 (126)
T cd03447          43 TITHGMYTSAAVRALVE--T-WAADNDRSRVRSFTASFVGMVLPNDELEVRLEHVGMVDGRKVIKVEARN----------  109 (126)
T ss_pred             CeechhHHHHHHHHHHH--H-hccCCCcceEEEEEEEEcccCcCCCEEEEEEEEEEEeCCeEEEEEEEEE----------
Confidence            45899888888865431  1 1222233455667999999999999999999999765556788888888          


Q ss_pred             CCCCCCCcCCCCCCCCC-CcEEEEEEEEEE
Q 030085          132 DHDADHHHHNNSTSSSS-SIMISSSTVTLL  160 (183)
Q Consensus       132 ~~~~~~~~~~~~~~~~~-g~lvA~~t~T~~  160 (183)
                                     ++ |+++..++.+..
T Consensus       110 ---------------q~~g~~V~~g~~~v~  124 (126)
T cd03447         110 ---------------EETGELVLRGEAEVE  124 (126)
T ss_pred             ---------------CCCCCEEEEEEEEEe
Confidence                           55 899888887764

Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and 17-beta-hydroxysteriod dehydrogenase (HSD).

>cd03451 FkbR2 FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes

Probab=97.75  E-value=0.00027  Score=54.26  Aligned_cols=81  Identities=12%  Similarity=0.096  Sum_probs=56.5

Q ss_pred             CcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEE-eEEEecCCCCCCEEEEEEEEEEeC-------CcEEEEEEEEEEcc
Q 030085           52 KVLHGGVSALIAESLASMGAHMASGFKRVAGVQL-TINHLKSAELGDLVRAVATPINLG-------KTIQVWQVRLWKVK  123 (183)
Q Consensus        52 G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrpa~~Gd~l~a~a~vi~~G-------r~~~~~~v~i~~~~  123 (183)
                      -.+||..+++++-.   +... ...+.......+ ++.|.+|+.+||+|+++++|+..-       ..+..+++++++  
T Consensus        54 ~ia~G~l~~~~~~~---~~~~-~~~~~~~~~~~~~~~~f~~pv~~GDtl~~~~~v~~~~~~~~~~~~~~v~~~~~~~n--  127 (146)
T cd03451          54 RLVNSLFTLSLALG---LSVN-DTSLTAVANLGYDEVRFPAPVFHGDTLYAESEVLSKRESKSRPDAGIVTVRTVGYN--  127 (146)
T ss_pred             ccccHHhHHHHHhh---heeh-hccccceeccCccEEEecCCCCCCCEEEEEEEEEEEecCCCCCCCeEEEEEEEEEC--
Confidence            47888888766531   1111 111111222232 899999999999999999998542       248888888887  


Q ss_pred             cccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          124 EVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                                             ++|++|+.++.++++
T Consensus       128 -----------------------q~g~~V~~~~~~~~~  142 (146)
T cd03451         128 -----------------------QDGEPVLSFERTALV  142 (146)
T ss_pred             -----------------------CCCCEEEEEEehhEE
Confidence                                   679999999999884

FkbR2 has sequence similarity to (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The function of FkbR2 is unknown.

>KOG2763 consensus Acyl-CoA thioesterase [Lipid transport and metabolism]

Probab=97.72  E-value=0.0006  Score=61.96  Aligned_cols=90  Identities=14%  Similarity=0.078  Sum_probs=75.0

Q ss_pred             EEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEE-eEEEecCCCCCCEEEEEEEEEEeC
Q 030085           31 ELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL-TINHLKSAELGDLVRAVATPINLG  109 (183)
Q Consensus        31 ~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrpa~~Gd~l~a~a~vi~~G  109 (183)
                      -..+..+...--..|.+.|.+|.+|||+++-.|+.++...|..... ..+.+.++ .|+|.+|+..|..|+..|.|...-
T Consensus       194 ~m~dT~v~sseI~~P~~~N~~G~iFGGflMrka~ElA~~~A~~f~~-~~p~~rsVD~i~F~~pVdvG~~L~f~s~V~yT~  272 (357)
T KOG2763|consen  194 WMKDTKVSSSEICQPEHRNIHGTIFGGFLMRKALELAEITAKLFCK-GRPATRSVDDIEFQKPVDVGCVLTFSSFVTYTD  272 (357)
T ss_pred             EeeccceeEEEeecCcccCccCceehHHHHHHHHHHHHHHHHHHcC-CCceEEEechhhccCcceeeeEEEEeeEEEEec
Confidence            3445566667778889999999999999999999998877776654 45677888 599999999999999999999886


Q ss_pred             CcEEEEEEEEEE
Q 030085          110 KTIQVWQVRLWK  121 (183)
Q Consensus       110 r~~~~~~v~i~~  121 (183)
                      .+-.++++++.+
T Consensus       273 ~k~~~vqv~~~~  284 (357)
T KOG2763|consen  273 NKSIYVQVKAVA  284 (357)
T ss_pred             CCceeEEEEEec
Confidence            666888888876

>cd03446 MaoC_like MoaC_like Similar to the MaoC (monoamine oxidase C) dehydratase regulatory protein but without the N-terminal PutA domain

Probab=97.70  E-value=0.00039  Score=53.06  Aligned_cols=80  Identities=20%  Similarity=0.223  Sum_probs=54.7

Q ss_pred             cccHHHHHHHHHHHHHHHHHHhcCC-ceeEEEE-EeEEEecCCCCCCEEEEEEEEEEeC------CcEEEEEEEEEEccc
Q 030085           53 VLHGGVSALIAESLASMGAHMASGF-KRVAGVQ-LTINHLKSAELGDLVRAVATPINLG------KTIQVWQVRLWKVKE  124 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~g~a~~~~~~~-~~~vTv~-l~i~flrpa~~Gd~l~a~a~vi~~G------r~~~~~~v~i~~~~~  124 (183)
                      .+||..+++++--+.   ....... ....... -++.|++|+.+||+|+++++|+...      +.+..++++++|   
T Consensus        52 ia~G~~~~a~~~~~~---~~~~~~~~~~~~~~g~~~~~f~~pv~~GD~l~~~~~v~~~~~~~~~~~~~v~~~~~~~n---  125 (140)
T cd03446          52 IAHGLLTLSIATGLL---QRLGVFERTVVAFYGIDNLRFLNPVFIGDTIRAEAEVVEKEEKDGEDAGVVTRRIEVVN---  125 (140)
T ss_pred             eeccccHHHHHhhHh---hhcccccceeeEEeccceEEEcCCCCCCCEEEEEEEEEEecccCCCCceEEEEEEEEEc---
Confidence            688888777654322   1111111 1111122 2899999999999999999998652      247777888887   


Q ss_pred             ccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          125 VQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                                            ++|++|..++.+.+
T Consensus       126 ----------------------q~g~~v~~~~~~~l  139 (140)
T cd03446         126 ----------------------QRGEVVQSGEMSLL  139 (140)
T ss_pred             ----------------------CCCCEEEEEEEeee
Confidence                                  78999999998876

This protein family has a hot-dog fold similar to that of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.

>COG4109 Predicted transcriptional regulator containing CBS domains [Transcription]

Probab=97.69  E-value=0.00033  Score=64.00  Aligned_cols=94  Identities=12%  Similarity=0.194  Sum_probs=80.2

Q ss_pred             EEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEE
Q 030085           41 FRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW  120 (183)
Q Consensus        41 m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~  120 (183)
                      +++.|.+.|+.|++-=|+++.|+-.+.-...... ......-=++++-||+|+...+.+.+..+++..||+.+-+++++|
T Consensus       337 ~~V~P~M~n~~Gtis~gv~~~ll~e~~qr~l~k~-~~~niiIE~i~iyflk~vqid~~l~I~prIl~~gR~~a~idvei~  415 (432)
T COG4109         337 VEVEPQMINSLGTISNGVFTELLTEVVQRVLRKK-KKRNIIIENITIYFLKPVQIDSVLEIYPRILEEGRKFAKIDVEIY  415 (432)
T ss_pred             EEechhhccccccchHHHHHHHHHHHHHHHHHHh-cCCceEEEeeeeeeecceecccEEEEeeeeeccccccceeEEEEe
Confidence            8899999999999999999999998876555443 224456667899999999999999999999999999999999999


Q ss_pred             EcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          121 KVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      .                          ++.++|.+-.+..+
T Consensus       416 ~--------------------------~~~ivaKAiv~~ql  430 (432)
T COG4109         416 H--------------------------DGQIVAKAIVTVQL  430 (432)
T ss_pred             e--------------------------Ccchhhhheeeeec
Confidence            6                          46778888877653

>PRK13692 (3R)-hydroxyacyl-ACP dehydratase subunit HadA; Provisional

Probab=97.69  E-value=0.00061  Score=54.81  Aligned_cols=64  Identities=16%  Similarity=0.055  Sum_probs=52.2

Q ss_pred             eEEEEEeEEEecCCCCCCEEEEEEEEEE--e--CCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEE
Q 030085           80 VAGVQLTINHLKSAELGDLVRAVATPIN--L--GKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSS  155 (183)
Q Consensus        80 ~vTv~l~i~flrpa~~Gd~l~a~a~vi~--~--Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~  155 (183)
                      ++-.+.+++|++|+.+||+|+++.+|+.  .  ++.+..++++++|                         ++|++|..+
T Consensus        84 ~~~~~q~~~f~~PV~~GDtL~~~~eV~~~~~~~~~giv~~~~~v~N-------------------------q~Ge~V~~~  138 (159)
T PRK13692         84 IVQVDQVLKFEKPIVAGDKLYCDVYVDSVREAHGTQIIVTKNIVTN-------------------------EEGDVVQET  138 (159)
T ss_pred             eEeeeeEEEEeCCccCCCEEEEEEEEEEEEEcCCceEEEEEEEEEc-------------------------CCCCEEEEE
Confidence            4556678999999999999999999973  2  5678999999998                         789999999


Q ss_pred             EEEEEEecCCCCcc
Q 030085          156 TVTLLCNLPVPDHA  169 (183)
Q Consensus       156 t~T~~~~~p~p~~~  169 (183)
                      +.|+++ .+..+.+
T Consensus       139 ~~~~~~-r~~~~~~  151 (159)
T PRK13692        139 YTTLAG-RAGEDGE  151 (159)
T ss_pred             EEEEEE-ecCCcCC
Confidence            999994 4444443

>cd03454 YdeM YdeM is a Bacillus subtilis protein that belongs to a family of prokaryotic proteins of unkown function

Probab=97.65  E-value=0.0011  Score=50.89  Aligned_cols=81  Identities=10%  Similarity=0.040  Sum_probs=56.2

Q ss_pred             cccHHHHHHHHHHHHHHHHHHhcCC-ceeEEEE-EeEEEecCCCCCCEEEEEEEEEEe-------CCcEEEEEEEEEEcc
Q 030085           53 VLHGGVSALIAESLASMGAHMASGF-KRVAGVQ-LTINHLKSAELGDLVRAVATPINL-------GKTIQVWQVRLWKVK  123 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~g~a~~~~~~~-~~~vTv~-l~i~flrpa~~Gd~l~a~a~vi~~-------Gr~~~~~~v~i~~~~  123 (183)
                      .+||-.+++++-.   +........ ....... .++.|++|+.+||+|+++++|+..       |+.+..++++++|  
T Consensus        50 ia~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~f~~pv~~Gd~l~~~~~v~~~~~~~~~~~~~~v~~~~~~~n--  124 (140)
T cd03454          50 AASGWHTAAITMR---LLVDAGLSGSASGGSPGIDELRWPRPVRPGDTLSVEVEVLDKRPSRSRPDRGIVTLRSETLN--  124 (140)
T ss_pred             eechHHHHHHHHH---hhhhhccccceEEEEcceeeeEeCCCCCCCCEEEEEEEEEEEeecCCCCCCeEEEEEEEEEc--
Confidence            6777776766432   111111111 1222333 389999999999999999999855       4458888888888  


Q ss_pred             cccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          124 EVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                                             ++|++|+.++.+.++
T Consensus       125 -----------------------q~g~~v~~~~~~~~~  139 (140)
T cd03454         125 -----------------------QRGEVVLTFEATVLV  139 (140)
T ss_pred             -----------------------CCCCEEEEEEehhee
Confidence                                   789999999988763

YdeM has sequence similarity to the hot-dog fold of (R)-specific enoyl-CoA hydratase. Other enzymes with this fold include the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.

>cd00493 FabA_FabZ FabA/Z, beta-hydroxyacyl-acyl carrier protein (ACP)-dehydratases: One of several distinct enzyme types of the dissociative, type II, fatty acid synthase system (found in bacteria and plants) required to complete successive cycles of fatty acid elongation

Probab=97.61  E-value=0.0093  Score=44.37  Aligned_cols=106  Identities=13%  Similarity=0.147  Sum_probs=70.4

Q ss_pred             EEEEEeC-CEEEEEEEcCCCCcCCC------CcccHHHHH-HHHHHHHHHHHHHhc----CCceeEEEEE-eEEEecCCC
Q 030085           28 ELEELTP-ERIIGCFRVTQNSCQPF------KVLHGGVSA-LIAESLASMGAHMAS----GFKRVAGVQL-TINHLKSAE   94 (183)
Q Consensus        28 ~~~~~~~-g~v~~~m~v~~~~~Np~------G~lHGG~~a-~LaD~A~g~a~~~~~----~~~~~vTv~l-~i~flrpa~   94 (183)
                      ++.++++ ++++++..+.+++.-..      +.+=|=++. .++-.++.++.....    ......-..+ ++.|.+|+.
T Consensus        11 ~i~~~~~~~~~~~~~~i~~~~~~~~~hfp~~p~lPg~~~iE~~aQ~~~~~~~~~~~~~~~~~~~~~l~~~~~~kf~~~v~   90 (131)
T cd00493          11 RVLEIDPGGRIVAEKNVTPNEPFFQGHFPGDPVMPGVLGIEAMAQAAAALAGLLGLGKGNPPRLGYLAGVRKVKFRGPVL   90 (131)
T ss_pred             EEEEEcCCCEEEEEEecCCCChhhcccCCCCCCCCcHHHHHHHHHHHHHHHHhcccccccCCcEEEEEEcceeEECCCcC
Confidence            5667777 88999999888753322      233332222 233332222222111    1122344443 899999999


Q ss_pred             CCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEE
Q 030085           95 LGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTL  159 (183)
Q Consensus        95 ~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~  159 (183)
                      +||+|++++++......+..+.++++.                          +|++++.++.++
T Consensus        91 pgd~l~i~~~i~~~~~~~~~~~~~~~~--------------------------~g~~v~~~~~~~  129 (131)
T cd00493          91 PGDTLTLEVELLKVRRGLGKFDGRAYV--------------------------DGKLVAEAELMA  129 (131)
T ss_pred             CCCEEEEEEEEEEeeCCEEEEEEEEEE--------------------------CCEEEEEEEEEE
Confidence            999999999999988889999999996                          489999998544

The third step of the elongation cycle, the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, is catalyzed by FabA or FabZ. FabA is bifunctional and catalyzes an additional isomerization reaction of trans-2-acyl-ACP to cis-3-acyl-ACP, an essential reaction to unsaturated fatty acid synthesis. FabZ is the primary dehydratase that participates in the elongation cycles of saturated as well as unsaturated fatty acid biosynthesis, whereas FabA is more active in the dehydration of beta-hydroxydecanoyl-ACP. The FabA structure is homodimeric with two independent active sites located at the dimer interface.

>PRK08190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated

Probab=97.58  E-value=0.0018  Score=60.27  Aligned_cols=81  Identities=14%  Similarity=0.133  Sum_probs=62.8

Q ss_pred             cccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEe--CCcEEEEEEEEEEcccccCCCC
Q 030085           53 VLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINL--GKTIQVWQVRLWKVKEVQSDDG  130 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~--Gr~~~~~~v~i~~~~~~~~~~~  130 (183)
                      .+||-.+++++..+.   . ...++...+-...+++|.+|+..||+|+++.+++..  ++.+..++++++|         
T Consensus        60 IahG~l~~s~~~~l~---~-~~~~g~~~~~~~~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~v~~~~~~~n---------  126 (466)
T PRK08190         60 VAHGMWGGALISAVL---G-TRLPGPGTIYLGQSLRFRRPVRIGDTLTVTVTVREKDPEKRIVVLDCRCTN---------  126 (466)
T ss_pred             eeCHHHHHHHHHHHH---h-hhCCCcceEEEEEEEEEeCCcCCCCEEEEEEEEEEEECCCCEEEEEEEEEe---------
Confidence            689988888775332   1 123333455567899999999999999999999743  6678888889998         


Q ss_pred             CCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085          131 RDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                                      ++|++|..++.++++.
T Consensus       127 ----------------q~G~~V~~g~~~~l~~  142 (466)
T PRK08190        127 ----------------QDGEVVITGTAEVIAP  142 (466)
T ss_pred             ----------------CCCCEEEEEEEEeecc
Confidence                            7899999999998843

>cd01289 FabA_like Domain of unknown function, appears to be related to a diverse group of beta-hydroxydecanoyl ACP dehydratases (FabA) and beta-hydroxyacyl ACP dehydratases (FabZ)

Probab=97.54  E-value=0.018  Score=44.90  Aligned_cols=107  Identities=12%  Similarity=0.056  Sum_probs=72.8

Q ss_pred             EEEEEeCCEEEEEEEcCCCCcCC---CCcccHHHHHHH-HHHHHHHHHH-Hh-c--CCceeEEEEE-eEEEecCCCC-CC
Q 030085           28 ELEELTPERIIGCFRVTQNSCQP---FKVLHGGVSALI-AESLASMGAH-MA-S--GFKRVAGVQL-TINHLKSAEL-GD   97 (183)
Q Consensus        28 ~~~~~~~g~v~~~m~v~~~~~Np---~G~lHGG~~a~L-aD~A~g~a~~-~~-~--~~~~~vTv~l-~i~flrpa~~-Gd   97 (183)
                      ++.+++++.+++...++.+...+   .+.+-|=.+.=. |=.++.++.. .. .  +.+...-+.+ ++.|.+|+.+ ||
T Consensus        18 ~v~~~~~~~~~~~~~v~~~~~f~~~~~~~~P~~l~iE~mAQa~a~~~g~~~~~~~~~~~~g~l~~i~~~~f~~~v~p~Gd   97 (138)
T cd01289          18 RVISWDDDSIHCRATVHPDPLFPLRAHGRLPAWVGIEYMAQAIAAHGGLLARQQGNPPRPGFLLGSRKYEAHVDRFDLGS   97 (138)
T ss_pred             EEEEEcCCEEEEEEEeCCCCcCccccCCCcchHHHHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEEEEEEEEcceeCCCC
Confidence            56677888998888888754322   245554433322 2233222211 11 1  2234455555 7999999766 99


Q ss_pred             EEEEEEEEEEeC-CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085           98 LVRAVATPINLG-KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus        98 ~l~a~a~vi~~G-r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      .++++++.++.. +.+.+++++++-                          +|+++|.++.+++
T Consensus        98 ~l~i~~~~~~~~~~~~~~~~~~~~v--------------------------~~~~va~a~l~~~  135 (138)
T cd01289          98 TLLIVVAELLQGDSGLGVFECTIED--------------------------QGGVLASGRLNVY  135 (138)
T ss_pred             eeEEEeeeeeeCCCcEEEEEEEEEE--------------------------CCEEEEEEEEEEE
Confidence            999999998887 499999999995                          5799999999988

This group appears to lack the conserved active site histidine of FabA and FabZ.

>cd03452 MaoC_C MaoC_C The C-terminal hot dog fold of the MaoC (monoamine oxidase C) dehydratase regulatory protein

Probab=97.49  E-value=0.0023  Score=49.88  Aligned_cols=81  Identities=16%  Similarity=0.131  Sum_probs=57.6

Q ss_pred             cccHHHHHHHHHHHHHHHHHHhcCCceeEEE-EEeEEEecCCCCCCEEEEEEEEEEe------CCcEEEEEEEEEEcccc
Q 030085           53 VLHGGVSALIAESLASMGAHMASGFKRVAGV-QLTINHLKSAELGDLVRAVATPINL------GKTIQVWQVRLWKVKEV  125 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv-~l~i~flrpa~~Gd~l~a~a~vi~~------Gr~~~~~~v~i~~~~~~  125 (183)
                      .+||-..++++-...   . ...++...... .-+++|++|+.+||+|+++.+|...      ++.+..+++++.|    
T Consensus        52 ia~G~l~~s~~~~l~---~-~~~~~~~~~~~g~~~~rf~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~n----  123 (142)
T cd03452          52 VAHGYFVLSAAAGLF---V-DPAPGPVLANYGLENLRFLEPVYPGDTIQVRLTCKRKIPRDGQDYGVVRWDAEVTN----  123 (142)
T ss_pred             eecHHHHHHHHhhhC---c-cCCcccEEEEeccceEEECCCCCCCCEEEEEEEEEEEeecCCCCcEEEEEEEEEEe----
Confidence            788888888776532   1 11122212222 2389999999999999999999865      1237778888888    


Q ss_pred             cCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085          126 QSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                                           ++|++|..++.++++.
T Consensus       124 ---------------------q~g~~V~~~~~~~~~~  139 (142)
T cd03452         124 ---------------------QNGELVASYDILTLVA  139 (142)
T ss_pred             ---------------------cCCCEEEEEEehHeeE
Confidence                                 7899999999988853

Orthologs of MaoC include PaaZ [Escherichia coli] and PaaN [Pseudomonas putida], which are putative ring-opening enzymes involved in phenylacetic acid degradation. The C-terminal domain of MaoC has sequence similarity to (R)-specific enoyl-CoA hydratase,Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. MaoC also has an N-terminal PutA domain like that found in the E. coli PutA proline dehydrogenase and other members of the aldehyde dehydrogenase family.

>PRK13691 (3R)-hydroxyacyl-ACP dehydratase subunit HadC; Provisional

Probab=97.40  E-value=0.0045  Score=50.21  Aligned_cols=60  Identities=17%  Similarity=0.076  Sum_probs=49.0

Q ss_pred             EEEEEeEEEecCCCCCCEEEEEEEEEEe----CCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEE
Q 030085           81 AGVQLTINHLKSAELGDLVRAVATPINL----GKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSST  156 (183)
Q Consensus        81 vTv~l~i~flrpa~~Gd~l~a~a~vi~~----Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t  156 (183)
                      +-.+-++.|++|+.+||+|+++.+|+..    ++.+..++.+++|                         ++|++|+.++
T Consensus        85 v~~~q~~~f~rPV~~GDtL~~~~~V~~~~~~~~~g~V~~~~~~~N-------------------------Q~Ge~V~~~~  139 (166)
T PRK13691         85 VQVDQRFVFHKPVLAGDKLWARMDIHSVDERFGADIVVTRNVCTN-------------------------DDGELVMEAY  139 (166)
T ss_pred             eeeeeEEEEeCCcCCCCEEEEEEEEEEEEEcCCCcEEEEEEEEEC-------------------------CCCCEEEEEE
Confidence            3345588899999999999999998854    5568888999998                         7899999999


Q ss_pred             EEEEEecCCC
Q 030085          157 VTLLCNLPVP  166 (183)
Q Consensus       157 ~T~~~~~p~p  166 (183)
                      .+++ ...+-
T Consensus       140 ~~~~-~~~~~  148 (166)
T PRK13691        140 TTLM-GQQGD  148 (166)
T ss_pred             EEEE-EecCC
Confidence            9998 44443

>COG5496 Predicted thioesterase [General function prediction only]

Probab=97.38  E-value=0.01  Score=47.04  Aligned_cols=102  Identities=18%  Similarity=0.111  Sum_probs=78.1

Q ss_pred             EEEEEcCCCCcCC-------CCcccHHHHHHHHHHHHHHHHHHhcCC-ceeEEEEEeEEEecCCCCCCEEEEEEEEEEeC
Q 030085           38 IGCFRVTQNSCQP-------FKVLHGGVSALIAESLASMGAHMASGF-KRVAGVQLTINHLKSAELGDLVRAVATPINLG  109 (183)
Q Consensus        38 ~~~m~v~~~~~Np-------~G~lHGG~~a~LaD~A~g~a~~~~~~~-~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~G  109 (183)
                      +.++.+++++.-+       ...+-=+++..+.++++--.+....+. ...+..+..++++.|..+|.+|.+.+++.+.-
T Consensus         8 e~~~lv~dn~t~~~~~~~~~~~VlATp~mi~~~E~a~~el~~~~Ld~g~ttVG~ev~vrHla~~~~G~~V~i~~~l~~v~   87 (130)
T COG5496           8 EGEFLVRDNHTVPPAEGSGMLNVLATPAMIGFMENASYELLQPYLDNGETTVGTEVLVRHLAATPPGLTVTIGARLEKVE   87 (130)
T ss_pred             EEEEEecccccCchhHhCCccceeehHHHHHHHHHHHHHHHHhhCcCCcceeeEEEEeeeccCCCCCCeEEEEEEEEEEe
Confidence            4445555555442       345667899999999876566555554 67899999999999999999999999999986


Q ss_pred             CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCC
Q 030085          110 KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVP  166 (183)
Q Consensus       110 r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p  166 (183)
                      ++=..+.+++.                          ++|.+|..+++|=.+ +|+-
T Consensus        88 Gr~v~f~i~a~--------------------------~~~~~Ig~g~h~R~i-v~~~  117 (130)
T COG5496          88 GRKVKFRIIAM--------------------------EGGDKIGEGTHTRVI-VPRE  117 (130)
T ss_pred             ccEEEEEEEEe--------------------------eCCcEEeeeEEEEEE-ecHH
Confidence            66666777776                          368999999999884 5543

>cd03444 Thioesterase_II_repeat1 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively

Probab=97.34  E-value=0.0071  Score=45.11  Aligned_cols=83  Identities=17%  Similarity=0.145  Sum_probs=69.5

Q ss_pred             cccHHHHHHHHHHHHHHHHHHhcCC-----ceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccC
Q 030085           53 VLHGGVSALIAESLASMGAHMASGF-----KRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQS  127 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~g~a~~~~~~~-----~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~  127 (183)
                      .+|=.++|-+.|......+....+.     ....+++-+|.|.+|....+.+..+.+..+.|.--+..++++|+      
T Consensus        16 ~~~~a~lA~~SD~~~l~~~~~~~~~~~~~~~~~aSldhsi~Fh~~~~~~~W~l~~~~~~~~~~gr~~~~~~l~~------   89 (104)
T cd03444          16 RLHAAALAYLSDSLLLGTALRPHGLPLFDASASASLDHAIWFHRPFRADDWLLYEQRSPRAGNGRGLVEGRIFT------   89 (104)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCcccCcceEeeeEEEEEeCCCCCCceEEEEEECccccCCeeEEEEEEEC------
Confidence            6888999999998865554443332     25789999999999998877999999999999999999999998      


Q ss_pred             CCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          128 DDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                                         ++|++||++.-.-+
T Consensus        90 -------------------~~G~LvAs~~Q~~l  103 (104)
T cd03444          90 -------------------RDGELVASVAQEGL  103 (104)
T ss_pred             -------------------CCCCEEEEEEEeee
Confidence                               78999999887654

TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.

>PLN02370 acyl-ACP thioesterase

Probab=97.20  E-value=0.042  Score=51.07  Aligned_cols=122  Identities=8%  Similarity=-0.075  Sum_probs=88.8

Q ss_pred             CCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHh--------------cCCceeEEE
Q 030085           18 PDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMA--------------SGFKRVAGV   83 (183)
Q Consensus        18 ~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~--------------~~~~~~vTv   83 (183)
                      ++.+...+|+.-..-+-...+..+.++...+++.|.+-=..++-++-.++..=+...              ..+...|-.
T Consensus       121 ~~~~~~~~~~~~~~~~~~~y~~~f~Ir~yEvD~~g~lsl~~L~n~lQd~A~~Hs~~lGll~~Gfg~~~~m~~~gl~WVLt  200 (419)
T PLN02370        121 SDMLIDPFGIGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGFGSTPEMSKRNLIWVVT  200 (419)
T ss_pred             CcccccccccCceeccCcEEEEEEEEeeEEECCCCCCCHHHHHHHHHHHHHHHHHHhCccccccccHHHHHhCCceEEEE
Confidence            444554555432221222346667788888999998887777777666644332211              112357889


Q ss_pred             EEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEec
Q 030085           84 QLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNL  163 (183)
Q Consensus        84 ~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~  163 (183)
                      .+.|.|.|+...||.|+++.++...||..++-+.+|++.                        ++|++++.++.+|.+.-
T Consensus       201 r~~I~~~R~P~~gD~V~V~Twv~~~~k~~~~Rdf~I~D~------------------------~~Ge~la~A~SvWV~mD  256 (419)
T PLN02370        201 RMQVLVDRYPTWGDVVQVDTWVSASGKNGMRRDWLVRDC------------------------KTGETLTRASSVWVMMN  256 (419)
T ss_pred             EEEEEeCcCCCCCCEEEEEEEEeeCCCCEEEEEEEEEEC------------------------CCCeEEEEEEEEEEEEE
Confidence            999999999999999999999999999999999999982                        47999999999987644

>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B

Probab=97.16  E-value=0.0043  Score=51.77  Aligned_cols=77  Identities=18%  Similarity=0.178  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHHHHHhcCC--ceeEEEEEeEEE-ecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCC
Q 030085           59 SALIAESLASMGAHMASGF--KRVAGVQLTINH-LKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDA  135 (183)
Q Consensus        59 ~a~LaD~A~g~a~~~~~~~--~~~vTv~l~i~f-lrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~  135 (183)
                      ++.++|.............  ...+|++++|.| -.|...++.+..+++....+.-.+..+++||+              
T Consensus       175 l~~~~D~~~~~~~~~~~~~~~~~~~tld~ti~f~~~p~~~~~Wl~~~~~~~~~~~Gr~~~~~~l~d--------------  240 (255)
T PF13622_consen  175 LAFLSDAFPPATLRAFSGPEWWFPATLDHTIHFHRLPFDGDEWLLLEARSPRAGNGRALMEGRLWD--------------  240 (255)
T ss_dssp             HHHHCTCCHHHHHHCHTSS--B-EEEEEEEEEECSHCCTTTS-EEEEEEEEEEETTEEEEEEEEEE--------------
T ss_pred             HHHHHHhcchhhccccCCccccccccceeEEEEEeCCccCCceEEEEEEEeEeCCCEEEEEEEEEC--------------
Confidence            8889998744443322222  346699999997 55666677999999888888888999999999              


Q ss_pred             CCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          136 DHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       136 ~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                                 ++|++||+++.+.+
T Consensus       241 -----------~~G~lvA~~~Q~~l  254 (255)
T PF13622_consen  241 -----------EDGRLVASSRQEAL  254 (255)
T ss_dssp             -----------TTS-EEEEEEEEEE
T ss_pred             -----------CCCCEEEEEEEEee
Confidence                       78999999998876

>PRK13188 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed

Probab=97.06  E-value=0.039  Score=51.88  Aligned_cols=108  Identities=13%  Similarity=0.092  Sum_probs=73.2

Q ss_pred             EEEEEeCCEEEEEEEcCCCC--cC----CCCcccHHHHHHHHHHHHHHHHHHhcCC---ceeEEEEE-eEEEecCCCCCC
Q 030085           28 ELEELTPERIIGCFRVTQNS--CQ----PFKVLHGGVSALIAESLASMGAHMASGF---KRVAGVQL-TINHLKSAELGD   97 (183)
Q Consensus        28 ~~~~~~~g~v~~~m~v~~~~--~N----p~G~lHGG~~a~LaD~A~g~a~~~~~~~---~~~vTv~l-~i~flrpa~~Gd   97 (183)
                      ++.++++++++....++.+.  ..    ....++|=++.-++=-++++.+....+.   ....-..+ ++.|++|+.+||
T Consensus       341 rIl~~e~~~i~a~k~Vs~De~ff~GHFPg~PI~PGVL~IEaMAQaagil~~~~~~~~~g~lg~LlgI~kvKF~~PV~PGD  420 (464)
T PRK13188        341 KIIELGDTKIVGIKNVTMNEPFFQGHFPGNPVMPGVLQIEAMAQTGGILVLNTVPDPENYSTYFMKIDKVKFRQKVVPGD  420 (464)
T ss_pred             EEeEEeCCEEEEEEEcCCCcHHhhccCCCCCccccHHHHHHHHHHHHHHHhhccCCCCCceEEEEeccEEEEcCCCCCCC
Confidence            45566678888888887764  22    2456776554422222223322211121   23344555 789999999999


Q ss_pred             EEEEEEEEEE-eCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           98 LVRAVATPIN-LGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        98 ~l~a~a~vi~-~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      +|++++++++ ..+.+..++++++.                          +|++++.++.++++
T Consensus       421 tL~I~veI~~~~~~giv~f~g~~~v--------------------------dGelVaeael~~~v  459 (464)
T PRK13188        421 TLIFKVELLSPIRRGICQMQGKAYV--------------------------NGKLVCEAELMAQI  459 (464)
T ss_pred             EEEEEEEEEEEecCCEEEEEEEEEE--------------------------CCEEEEEEEEEEEE
Confidence            9999999886 55778899999984                          58999999999984

>TIGR00189 tesB acyl-CoA thioesterase II

Probab=97.03  E-value=0.0098  Score=50.51  Aligned_cols=83  Identities=11%  Similarity=0.081  Sum_probs=64.6

Q ss_pred             cccHHHHHHHHHHHH-HHHHHHhc-CC---ceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccC
Q 030085           53 VLHGGVSALIAESLA-SMGAHMAS-GF---KRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQS  127 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~-g~a~~~~~-~~---~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~  127 (183)
                      .+|=-.++.++|..+ ..+..... ..   ....++|.+|.|.++...++.+..+++....+.-..+.+++||+      
T Consensus       182 ~~~~~~la~~sD~~~l~~~l~~~~~~~~~~~~~aSldhtv~fh~~~~~~~W~l~~~~s~~~~~Grg~~~~~l~d------  255 (271)
T TIGR00189       182 RLHQCALAYLSDLTLLPTALNPHNKAGFDGSMAASLDHSIWFHRPFRADDWLLYKCSSPSASGSRGLVEGKIFT------  255 (271)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCcccCCcEEEeeeeeEEEeCCCCCCeeEEEEEEeccccCCceEEEEEEEC------
Confidence            457788999999832 22322221 11   33579999999999988888999999999888888999999998      


Q ss_pred             CCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          128 DDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                                         .+|++||+++-.-+
T Consensus       256 -------------------~~G~lvAs~~Qe~l  269 (271)
T TIGR00189       256 -------------------RDGVLIASTVQEGL  269 (271)
T ss_pred             -------------------CCCCEEEEEEeeee
Confidence                               78999999887654

Subunit: homotetramer.

>PF07977 FabA: FabA-like domain; InterPro: IPR013114 Fatty acids biosynthesis occurs by two distinct pathways: in fungi, mammals and mycobacteria, type I or associative fatty-acid biosynthesis (type I FAS) is accomplished by multifunctional proteins in which distinct domains catalyse specific reactions; in plants and most bacteria, type II or dissociative fatty-acid biosynthesis (type II FAS) is accomplished by distinct enzymes []

Probab=96.84  E-value=0.14  Score=39.29  Aligned_cols=94  Identities=14%  Similarity=0.092  Sum_probs=58.0

Q ss_pred             EEEEEe-C-CE----EEEEEEcCCCCc--C---CCCcccHHHHH--HHHHHHHHHHHHHhc-C--C---ceeEEEEE-eE
Q 030085           28 ELEELT-P-ER----IIGCFRVTQNSC--Q---PFKVLHGGVSA--LIAESLASMGAHMAS-G--F---KRVAGVQL-TI   87 (183)
Q Consensus        28 ~~~~~~-~-g~----v~~~m~v~~~~~--N---p~G~lHGG~~a--~LaD~A~g~a~~~~~-~--~---~~~vTv~l-~i   87 (183)
                      ++.+++ + +.    ++++..+.+++-  .   |..-+--|++.  +++-.++.++..... .  +   ....-..+ ++
T Consensus        12 ~v~~v~~~g~~~~g~~~a~~~v~~~~~~f~gHFp~~Pv~PGvl~iE~~aQ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   91 (138)
T PF07977_consen   12 RVLEVDPPGGSHGGRIVARKNVTPDEPFFDGHFPGDPVMPGVLLIEAMAQAAGFLAGYSGLAEGTGEARKVPFLAGIRNV   91 (138)
T ss_dssp             EEEEEETTTTETTEEEEEEEEE-TTSGGGGCSTTTS--B-HHHHHHHHHHHHHHHHHHHCCSSSCCCCCEEEEEEEEEEE
T ss_pred             EEEEEEcCCCeEEEEEEEEEEeCCCCCEEEcCCCCCCCCCeEhHHHHHHHHHHhHhhhccccccCCCcceEEEeccccEE
Confidence            566666 4 44    888888887652  2   22334445444  455655544444421 1  1   11223333 79


Q ss_pred             EEecCCCCCC-EEEEEEEEEE---eCCcEEEEEEEEEE
Q 030085           88 NHLKSAELGD-LVRAVATPIN---LGKTIQVWQVRLWK  121 (183)
Q Consensus        88 ~flrpa~~Gd-~l~a~a~vi~---~Gr~~~~~~v~i~~  121 (183)
                      .|++|+.+|+ .+++++++.+   ....++.++++++.
T Consensus        92 kF~~~v~Pg~~~l~~~v~i~~~~~~~~~~~~~~~~~~v  129 (138)
T PF07977_consen   92 KFRGPVYPGDKTLRIEVEIKKIRRREGGMAIFDGTAYV  129 (138)
T ss_dssp             EE-S-B-TTE-EEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred             EECccEeCCCcEEEEEEEEEEeecccCCEEEEEEEEEE
Confidence            9999999999 9999999999   89999999999995

Both FabZ and FabA catalyse the dehydration of beta-hydroxyacyl acyl carrier protein (ACP) to trans 2-enoyl ACP. However, FabZ and FabA display subtle differences in substrate specificities, whereby FabA is most effective on acyl ACPs of 9-11 carbon atoms in length, while FabZ is less specific. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains. This enzyme domain has a HotDog fold.; PDB: 3D6X_F 2GLV_J 2GLM_E 2GLP_E 2GLL_C 1U1Z_F 3ESI_A 3AZB_T 3AZA_M 3AZ9_U ....

>cd01287 FabA FabA, beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase: Bacterial protein of the type II, fatty acid synthase system that binds ACP and catalyzes both dehydration and isomerization reactions, apparently in the same active site

Probab=96.44  E-value=0.35  Score=38.67  Aligned_cols=110  Identities=10%  Similarity=-0.004  Sum_probs=70.0

Q ss_pred             EEEEEeC-------CEEEEEEEcCCCC--cC----CCCcccHHHHHHHHHHHHHHHHHHhcC-------CceeEEEEE-e
Q 030085           28 ELEELTP-------ERIIGCFRVTQNS--CQ----PFKVLHGGVSALIAESLASMGAHMASG-------FKRVAGVQL-T   86 (183)
Q Consensus        28 ~~~~~~~-------g~v~~~m~v~~~~--~N----p~G~lHGG~~a~LaD~A~g~a~~~~~~-------~~~~vTv~l-~   86 (183)
                      ++.++++       |+++.+..+++++  .+    ...++-|=.+.=.+=-++++.+.....       ....+.... +
T Consensus        13 rV~~~~~~~G~~~~g~i~a~k~v~~~e~ff~gHFp~~pvmPG~L~iEamaQ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~   92 (150)
T cd01287          13 RVTEIDPGGGTFGLGYLRAEKDIDPDDWFFPCHFHGDPVMPGSLGLEAMIQLLQFYLIWLGLGTGVDNPRFQGAPGGPGE   92 (150)
T ss_pred             EEEEEecCCCcccccEEEEEEEcCCCCceEcCCCCCCCcCchHHHHHHHHHHHHHHHhhcccccccCcccceeEeccceE
Confidence            4556665       4788888888864  23    233444433333333333333221111       111222222 7


Q ss_pred             EEEecCCCCCC-EEEEEEEEEEeC----CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           87 INHLKSAELGD-LVRAVATPINLG----KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        87 i~flrpa~~Gd-~l~a~a~vi~~G----r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      +.|.+++.+|+ .|+.++++.+.+    ++++..++.++-                          +|++|+.++..-..
T Consensus        93 ~kfr~~v~Pgd~~l~~e~~i~~~~~~~~~~~~~~~~~~~v--------------------------dg~~v~~a~~~~~~  146 (150)
T cd01287          93 WKYRGQITPHNKKVTYEVHIKEVGRDGPRPYIIADASLWV--------------------------DGLRIYEAKDIAVR  146 (150)
T ss_pred             EEECccCcCCCEEEEEEEEEEEEEccCCccEEEEEEEEEE--------------------------CCEEEEEEEccEEE
Confidence            99999999998 799999999986    499999999995                          68999999877654


Q ss_pred             ec
Q 030085          162 NL  163 (183)
Q Consensus       162 ~~  163 (183)
                      ..
T Consensus       147 ~~  148 (150)
T cd01287         147 LV  148 (150)
T ss_pred             eE
Confidence            33

The FabA structure is a homodimer with two independent active sites located at the dimer interface. Each active site is tunnel-shaped and completely inaccessible to solvent. No metal ions or cofactors are required for ligand binding or catalysis.

>KOG3016 consensus Acyl-CoA thioesterase [Lipid transport and metabolism]

Probab=96.44  E-value=0.036  Score=49.33  Aligned_cols=102  Identities=13%  Similarity=0.029  Sum_probs=78.8

Q ss_pred             CEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEE
Q 030085           27 FELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPI  106 (183)
Q Consensus        27 ~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi  106 (183)
                      ++++.++++.-+.+-..... .+|.+.+.||-+++-+=.|   |..+.  +...+--.|+..|++......+|.-.-+-+
T Consensus        14 l~l~~lD~n~f~~~~l~~g~-~~~~~~~fGG~i~sQaLaA---A~~TV--~e~f~p~SlH~YFI~~gd~~~pI~Y~V~ri   87 (294)
T KOG3016|consen   14 LNLERLDKNLYLTRHLPKGR-EIPSNHAYGGQIASQALAA---ASKTV--EEMFIPHSLHCYFILVGDPNIPIIYDVKRI   87 (294)
T ss_pred             heeeecCCCceecccCCccc-cccCcccccceehHHHHHH---HHhcc--ccccccceeeeeeeecCCCCCceEEEeeee
Confidence            35667777766666554322 3778889999888765332   33332  234667789999999999998999999999


Q ss_pred             EeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          107 NLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       107 ~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      |.||+.+.-+|+.+.                          +||+|-++...|-
T Consensus        88 rdGr~F~~R~V~AvQ--------------------------~~k~If~~qiSF~  115 (294)
T KOG3016|consen   88 RDGRNFATRSVDAVQ--------------------------KGKTIFTLQISFQ  115 (294)
T ss_pred             cCCceeEEEEEEEEE--------------------------CCeEEEEEEEEEc
Confidence            999999999999994                          6899999999997

>COG2030 MaoC Acyl dehydratase [Lipid metabolism]

Probab=96.10  E-value=0.16  Score=40.58  Aligned_cols=52  Identities=13%  Similarity=0.196  Sum_probs=43.1

Q ss_pred             eEEEecCCCCCCEEEEEEEEEEe----CCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           86 TINHLKSAELGDLVRAVATPINL----GKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        86 ~i~flrpa~~Gd~l~a~a~vi~~----Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      ++.|++|+.+||+|+++.+++..    .+.+..++.++++                         ..|+++.....+.++
T Consensus       100 ~vRF~~PV~~Gdtl~~~~~v~~~~~~~~~G~v~~~~~~~~-------------------------~~g~~v~~~~~~~~~  154 (159)
T COG2030         100 EVRFVKPVFPGDTLRARVEVLDKRPSKSRGLVTLRLETVN-------------------------QEGELVLTLEATVLV  154 (159)
T ss_pred             ceEecCCCCCCCEEEEEEEEEEeeecCCceEEEEEEEEEc-------------------------cCCcEEEEEEEeEeE
Confidence            79999999999999999999853    1366777888887                         678899999998885


Q ss_pred             e
Q 030085          162 N  162 (183)
Q Consensus       162 ~  162 (183)
                      .
T Consensus       155 ~  155 (159)
T COG2030         155 L  155 (159)
T ss_pred             e
Confidence            3

>PF01575 MaoC_dehydratas: MaoC like domain; InterPro: IPR002539 The C terminus of the MaoC protein is found to share similarity with a wide variety of enzymes

Probab=96.00  E-value=0.09  Score=39.60  Aligned_cols=67  Identities=15%  Similarity=0.074  Sum_probs=44.2

Q ss_pred             CCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEe--CCcEEEEEEEE
Q 030085           50 PFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINL--GKTIQVWQVRL  119 (183)
Q Consensus        50 p~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~--Gr~~~~~~v~i  119 (183)
                      +.-.+||-.+++++-...   .....+........++++|++|+.+||+|.++.+++..  ++....+++++
T Consensus        49 ~~~ivhG~~~~a~~~~~~---~~~~~~~~~~~~~~~~~rF~~PV~~gdtl~~~~~v~~~~~~~~~~~v~~~~  117 (122)
T PF01575_consen   49 GGPIVHGMLTLALASGLL---GDWLGPNPPARLGRFNVRFRAPVFPGDTLTAEVEVTEKREGKERVRVTVTV  117 (122)
T ss_dssp             SSSB-BHHHHHHHHHHHH---HHHHSTTECEEEEEEEEEESS--BTTEEEEEEEEEEEEEEEEEEEEEEEEE
T ss_pred             CCEEEccHHHHHHHHHHH---HHhccCccceEEEEEEEEEeccccCCCEEEEEEEEEEEEEcCceEEEEEEE
Confidence            356899999998886443   22222223577888999999999999999999999854  44444444443

All these enzymes contain multiple domains. This domain is found in parts of two enzymes that have been assigned dehydratase activities. A deletion mutant of the C-terminal 271 amino acids in Q02207 from SWISSPROT abolished its 2-enoyl-CoA hydratase activity, suggesting that this region may be a hydratase enzyme []. The maoC gene is part of a operon with maoA which is involved in the synthesis of monoamine oxidase [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1PN4_C 1PN2_B 1S9C_K 3OML_A 1Q6W_B 2B3M_A 3K67_B ....

>PRK13693 (3R)-hydroxyacyl-ACP dehydratase subunit HadB; Provisional

Probab=95.98  E-value=0.25  Score=38.78  Aligned_cols=66  Identities=6%  Similarity=0.004  Sum_probs=46.1

Q ss_pred             CCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCC-CC----EEEEEEEEEEe--CCcEEEEEEEEEE
Q 030085           51 FKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAEL-GD----LVRAVATPINL--GKTIQVWQVRLWK  121 (183)
Q Consensus        51 ~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~-Gd----~l~a~a~vi~~--Gr~~~~~~v~i~~  121 (183)
                      .=.+||-..++++-.+..  .  +.+....+ ..++++|.+|+.. ||    +|+++++|...  ++....+++.+.+
T Consensus        54 ~~iahG~~~~a~~~~~~~--~--~~~~~~~~-~~~~~rF~~pv~~g~D~~~~~l~~~~~V~~~~~~~~~v~~~~~~~~  126 (142)
T PRK13693         54 TAIAHGMLTMGLGGGYVT--S--WVGDPGAV-TEYNVRFTAVVPVPNDGKGAELVFNGRVKSVDPESKSVTIALTATT  126 (142)
T ss_pred             CcEecHHHHHHHHHHHHH--H--hcCCCcce-EEEEEEecccEECCCCccceEEEEEEEEEEeccCCcEEEEEEEEEE
Confidence            456899999888775431  1  22222223 3679999999975 34    89999999854  6778888888876

>cd03448 HDE_HSD HDE_HSD The R-hydratase-like hot dog fold of the 17-beta-hydroxysteriod dehydrogenase (HSD), and Hydratase-Dehydrogenase-Epimerase (HDE) proteins

Probab=95.89  E-value=0.16  Score=39.01  Aligned_cols=63  Identities=13%  Similarity=0.081  Sum_probs=41.3

Q ss_pred             CcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEE
Q 030085           52 KVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW  120 (183)
Q Consensus        52 G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~  120 (183)
                      =.+||-.+++++..+.   .....++....-..++++|.+|+..||+|+++.++  .++ ...+++++.
T Consensus        45 ~iahG~~t~a~~~~~~---~~~~~~~~~~~~~~~~~rF~~PV~~gDtl~~~~~~--~~~-~v~~~~~~~  107 (122)
T cd03448          45 PILHGLCTYGFAARAV---LEAFADGDPARFKAIKVRFSSPVFPGETLRTEMWK--EGN-RVIFQTKVV  107 (122)
T ss_pred             ceehhHHHHHHHHHHH---HHHhcCCCcceeEEEEEEEcCCccCCCEEEEEEEE--eCC-EEEEEEEEc
Confidence            4689988888776542   11112222334455699999999999999998874  455 445555554

Other enzymes with this fold include MaoC dehydratase, and the fatty acid synthase beta subunit.

>cd03450 NodN NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit

Probab=95.79  E-value=0.17  Score=40.15  Aligned_cols=67  Identities=15%  Similarity=0.091  Sum_probs=43.7

Q ss_pred             cccHHHHHHHHHHHHHHHHHHhcCCce--eEEEEEeEEEecCCCCCCEEEEEEEEEEe----C-CcEEEEEEEEEE
Q 030085           53 VLHGGVSALIAESLASMGAHMASGFKR--VAGVQLTINHLKSAELGDLVRAVATPINL----G-KTIQVWQVRLWK  121 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~g~a~~~~~~~~~--~vTv~l~i~flrpa~~Gd~l~a~a~vi~~----G-r~~~~~~v~i~~  121 (183)
                      .+||-..++++..+.+-  ....++..  ..-...+++|++|+.+||+|+++.+|...    + +..+.+++++.-
T Consensus        58 Ia~G~~t~sl~~~l~~~--~~~~~~~~~~~~~g~~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~~~~~~~~~~~~~  131 (149)
T cd03450          58 IAHGFLTLSLLPALTPQ--LFRVEGVKMGVNYGLDKVRFPAPVPVGSRVRGRFTLLSVEELKGGGVQVTLEVTVEI  131 (149)
T ss_pred             EECHHHHHHHHHHHHHh--cccCCCceEEEEeeccEEEeCcceeCCcEEEEEEEEEEEEEcCCCeEEEEEEEEEEE
Confidence            68998888887654321  11111111  11223479999999999999999998853    2 247777777775

Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.

>KOG2763 consensus Acyl-CoA thioesterase [Lipid transport and metabolism]

Probab=95.75  E-value=0.17  Score=46.21  Aligned_cols=98  Identities=15%  Similarity=0.136  Sum_probs=76.4

Q ss_pred             cCCCCcCCCCcccHH-HHHHHHHHHHHHHHHHhcCC--------ceeEEEEE-eEEEecCCCCCC-EEEEEEEEEEeCCc
Q 030085           43 VTQNSCQPFKVLHGG-VSALIAESLASMGAHMASGF--------KRVAGVQL-TINHLKSAELGD-LVRAVATPINLGKT  111 (183)
Q Consensus        43 v~~~~~Np~G~lHGG-~~a~LaD~A~g~a~~~~~~~--------~~~vTv~l-~i~flrpa~~Gd-~l~a~a~vi~~Gr~  111 (183)
                      ..|.+.|..|..+|| =+.-|+|.+..+|.+.+...        ..+||... .|+|.+|...|+ .+.+.|.|.+.||+
T Consensus        15 ~lp~~a~~s~~~~~~prigk~lE~ld~~a~~~hc~~~~~~~~~p~~~VtAsV~~i~f~~~~~~~~~d~i~~a~Vt~a~~s   94 (357)
T KOG2763|consen   15 VLPPRANHSGNTFVGPRIGKILEDLDALAVYRHCSEAEEGATLPRTIVTASVDRIDFEKPSEVGQVDIIIVAKVTWAGKS   94 (357)
T ss_pred             CCCCccccccceecchHHHHHHHHhhhhhheeecccccccCccceEEEEeeEEEEEeeccccccceeEEEEEEEEecccc
Confidence            566777888999999 59999999988877544311        34678888 699999888884 57788999999999


Q ss_pred             EEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          112 IQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       112 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      .+-+++.|..+++                    -+++-+++-+++.||.
T Consensus        95 SMEv~i~V~q~~~--------------------~~~~~~~~~kA~f~fV  123 (357)
T KOG2763|consen   95 SMEVSIYVMQEDL--------------------ATGEKSLVLKATFTFV  123 (357)
T ss_pred             ceEEEEEEEEehh--------------------ccchhhheeeeEEEEE
Confidence            9999999986221                    0145688999999998

>PRK10526 acyl-CoA thioesterase II; Provisional

Probab=95.64  E-value=0.24  Score=43.14  Aligned_cols=84  Identities=6%  Similarity=0.072  Sum_probs=66.2

Q ss_pred             cccHHHHHHHHHHH-HHHHHHHhc-C----CceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEccccc
Q 030085           53 VLHGGVSALIAESL-ASMGAHMAS-G----FKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQ  126 (183)
Q Consensus        53 ~lHGG~~a~LaD~A-~g~a~~~~~-~----~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~  126 (183)
                      .+|=-+++-+.|.- ...++.... .    .....+++-+|.|.+|.+..|.+..+.+..+.|.--.+.+++||+     
T Consensus       193 ~~~~~~lay~sD~~~l~~al~~~~~~~~~~~~~~aSLdhsi~Fh~~~~~d~W~L~~~~s~~a~~gr~~~~g~i~~-----  267 (286)
T PRK10526        193 RVHQYLLGYASDLNFLPVALQPHGIGFLEPGMQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYT-----  267 (286)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCccCCcceEEeeeEeEEEeCCCCCCceEEEEEECCcccCCceEEEEEEEC-----
Confidence            58888888777733 233333221 1    234678999999999999999999999999988888999999998     


Q ss_pred             CCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          127 SDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                                          .+|+|||++.-.-++
T Consensus       268 --------------------~~G~LvAs~~Qegl~  282 (286)
T PRK10526        268 --------------------QDGVLVASTVQEGVM  282 (286)
T ss_pred             --------------------CCCCEEEEEEeeEEE
Confidence                                789999999888764

>PF13452 MaoC_dehydrat_N: N-terminal half of MaoC dehydratase; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1S9C_K 3OML_A 3KHP_A

Probab=95.44  E-value=0.078  Score=40.00  Aligned_cols=44  Identities=14%  Similarity=0.136  Sum_probs=30.2

Q ss_pred             ceeEEEEEeEEEecCCCCCCEEEEEEEEEEe----C-CcEE--EEEEEEEE
Q 030085           78 KRVAGVQLTINHLKSAELGDLVRAVATPINL----G-KTIQ--VWQVRLWK  121 (183)
Q Consensus        78 ~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~----G-r~~~--~~~v~i~~  121 (183)
                      ...+-.+.++.|.+|+++||+|+++++|...    | .+..  .++.+++|
T Consensus        73 ~~~vh~~~~~~~h~Pl~~Gd~l~~~~~v~~v~~k~g~G~~~~v~~~~~~~~  123 (132)
T PF13452_consen   73 TRLVHGEQDIEFHRPLRPGDTLTATSRVTDVYDKRGAGKGVFVTVETEYTD  123 (132)
T ss_dssp             GGEEEEEEEEEESS--BSSEEEEEEEEEEEEEEES-TTSEEEEEEEEEEE-
T ss_pred             hhEEecCcEEEEeCCCCCCCEEEEEEEEEEEEEecCCCCEEEEEEEEEEEC
Confidence            4577788999999999999999999998743    2 1244  44566776

>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN

Probab=95.14  E-value=0.12  Score=50.32  Aligned_cols=80  Identities=16%  Similarity=0.123  Sum_probs=55.8

Q ss_pred             cccHHHHHHHHHHHHHHHHHHhcCCceeEE-EEEeEEEecCCCCCCEEEEEEEEEEe------CCcEEEEEEEEEEcccc
Q 030085           53 VLHGGVSALIAESLASMGAHMASGFKRVAG-VQLTINHLKSAELGDLVRAVATPINL------GKTIQVWQVRLWKVKEV  125 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~g~a~~~~~~~~~~vT-v~l~i~flrpa~~Gd~l~a~a~vi~~------Gr~~~~~~v~i~~~~~~  125 (183)
                      ..||-..++++....   .. ..++..... -.-+++|++|+..||+|+++++|+..      ++.+..+++++++    
T Consensus       575 Ia~G~l~~sl~~~l~---~~-~~~~~~~~~~g~~~~rF~~PV~~GDtl~~~~~V~e~~~~~~~~~g~v~~~~~v~n----  646 (663)
T TIGR02278       575 VAHGYFVLSAAAGLF---VD-PAPGPVLANYGLENLRFLEPVGPGDTIQVRLTVKRKTPRDEKTYGVVEWAAEVVN----  646 (663)
T ss_pred             eeCHHHHHHHHHHHh---hc-cCccchhhhcccceEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEEc----
Confidence            788988888885332   11 111211111 12389999999999999999999843      1227788888887    


Q ss_pred             cCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          126 QSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                                           ++|++|.++..++++
T Consensus       647 ---------------------q~G~~Vl~~~~~~lv  661 (663)
T TIGR02278       647 ---------------------QNGEPVATYDVLTLV  661 (663)
T ss_pred             ---------------------CCCCEEEEEEEHHhc
Confidence                                 789999999888763

This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.

>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []

Probab=95.09  E-value=1.4  Score=37.71  Aligned_cols=103  Identities=11%  Similarity=0.035  Sum_probs=71.6

Q ss_pred             EEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc--------------CCceeEEEEEeEEEecCCCCCCEEEEEE
Q 030085           38 IGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS--------------GFKRVAGVQLTINHLKSAELGDLVRAVA  103 (183)
Q Consensus        38 ~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~--------------~~~~~vTv~l~i~flrpa~~Gd~l~a~a  103 (183)
                      .-.+.+....+++.|.+.=-.++.++-.+++.-+....              .+...+-....|.+.|+...||+|.++.
T Consensus         5 ~~~~~v~~~e~d~~~~l~l~~l~~~~qe~a~~h~~~lG~~~~~~~~~~~l~~~~~~Wvl~r~~i~i~r~P~~~e~i~i~T   84 (261)
T PF01643_consen    5 EKEFTVRYYECDPNGRLKLSALLNYFQEAATEHAESLGFGMDYFGSTPELKKQGLAWVLSRYQIEIHRYPRWGEKITIET   84 (261)
T ss_dssp             EEEEE--GGGB-TTSBB-HHHHHHHHHHHHHHHHHHTT-SHHH------HHCTTEEEEEEEEEEEESS--BTT-EEEEEE
T ss_pred             EEEEEEcceeeCCCCCCCHHHHHHHHHHHHHHHHHHhCCCcccchhhhhHhhcCcEEEEEEEEEEEEecCCCCCEEEEEE
Confidence            34677888889999999887777777666554333221              1224677888999999999999999999


Q ss_pred             EEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecC
Q 030085          104 TPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLP  164 (183)
Q Consensus       104 ~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p  164 (183)
                      ++...+|-.++=+.+|++.                        ++|++++.++..|.+.-.
T Consensus        85 w~~~~~~~~~~R~f~i~d~------------------------~~G~~l~~a~s~WvliD~  121 (261)
T PF01643_consen   85 WPSGFKRFFAYRDFEIYDA------------------------EDGELLARATSIWVLIDL  121 (261)
T ss_dssp             EEEEE-SSEEEEEEEEE--------------------------TTS-EEEEEEEEEEEEET
T ss_pred             EeccCCCcEEEEEEEEEEC------------------------CCCcEEEEEEEEEEEEEh
Confidence            9999999999999999972                        579999999999985443

These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.

>PRK05174 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; Validated

Probab=95.03  E-value=1.6  Score=35.70  Aligned_cols=94  Identities=7%  Similarity=-0.103  Sum_probs=56.1

Q ss_pred             EEEEEeCC-------EEEEEEEcCCCCcCCCCccc-----HHHHH--HHHHHHHHHHHHHhcCCceeEEEEEeEEEecCC
Q 030085           28 ELEELTPE-------RIIGCFRVTQNSCQPFKVLH-----GGVSA--LIAESLASMGAHMASGFKRVAGVQLTINHLKSA   93 (183)
Q Consensus        28 ~~~~~~~g-------~v~~~m~v~~~~~Np~G~lH-----GG~~a--~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa   93 (183)
                      ++.+++++       .++++..++++.-=..|..+     =|++.  ++|=.++.++............-.-+..|.+++
T Consensus        39 rV~~~~~~gg~~~~g~i~a~k~v~~~e~ff~gHFp~~PvmPG~L~iEamAQ~~~~~~~~~~~~~~g~l~g~~~~kfr~~v  118 (172)
T PRK05174         39 RITEISETGGEFGKGYIVAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGPGKGRALGVGEVKFTGQV  118 (172)
T ss_pred             EEEEEcCCCCcccceEEEEEEECCCCCccccCCCCCCCcCchHHHHHHHHHHHHHHHhcccccCceEEeeccEEEECccC
Confidence            45566665       69999988886521122222     24432  233333333321111111122222369999999


Q ss_pred             CCCCE-EEEEEEEEEe---CCcEEEEEEEEEE
Q 030085           94 ELGDL-VRAVATPINL---GKTIQVWQVRLWK  121 (183)
Q Consensus        94 ~~Gd~-l~a~a~vi~~---Gr~~~~~~v~i~~  121 (183)
                      .+|+. ++.+.++.+.   .+.+.+.+++++-
T Consensus       119 ~Pgd~~l~l~v~i~~~~~~~~~~~~~~~~i~v  150 (172)
T PRK05174        119 LPTAKKVTYEIDIKRVINRKLVMGIADGRVLV  150 (172)
T ss_pred             cCCCEEEEEEEEEEEEecCCCCEEEEEEEEEE
Confidence            99997 7888888875   5679999999995

>PLN02864 enoyl-CoA hydratase

Probab=94.87  E-value=0.45  Score=42.23  Aligned_cols=92  Identities=15%  Similarity=0.025  Sum_probs=58.1

Q ss_pred             EEEEEEcCCCCcCC---------CCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEE
Q 030085           37 IIGCFRVTQNSCQP---------FKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPIN  107 (183)
Q Consensus        37 v~~~m~v~~~~~Np---------~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~  107 (183)
                      ..+.-..+|-|.++         .-++||=..++++-.+.   .....++....-..++++|.+|+.+||+|+++.+.  
T Consensus       204 a~lSGD~NPiH~d~~~A~~~gf~~~IaHGm~t~g~~~~~~---~~~~~~~~~~~~~~~~~rF~~PV~pGdtl~~~~~~--  278 (310)
T PLN02864        204 YRLSGDYNPLHSDPMFAKVAGFTRPILHGLCTLGFAVRAV---IKCFCNGDPTAVKTISGRFLLHVYPGETLVTEMWL--  278 (310)
T ss_pred             HHhhCCCCcccCCHHHHhhCCCCCceeccHHHHHHHHHHH---HhhhcCCCCceEEEEEEEEcCCccCCCEEEEEEEe--
Confidence            34455666666663         24589988777655431   11112222233456899999999999999877764  


Q ss_pred             eCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          108 LGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       108 ~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      .| ....+++++ +                         ++|+++..+++++.
T Consensus       279 ~~-~~v~~~~~~-~-------------------------~~g~~vl~G~a~~~  304 (310)
T PLN02864        279 EG-LRVIYQTKV-K-------------------------ERNKAVLSGYVDLR  304 (310)
T ss_pred             CC-CEEEEEEEE-e-------------------------cCCeEEEEEEEEEe
Confidence            34 345566665 3                         45788888888775

>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

Probab=94.77  E-value=0.19  Score=48.94  Aligned_cols=80  Identities=16%  Similarity=0.150  Sum_probs=55.2

Q ss_pred             cccHHHHHHHHHHHHHHHHHHhcCCceeEEEE-EeEEEecCCCCCCEEEEEEEEEEe------CCcEEEEEEEEEEcccc
Q 030085           53 VLHGGVSALIAESLASMGAHMASGFKRVAGVQ-LTINHLKSAELGDLVRAVATPINL------GKTIQVWQVRLWKVKEV  125 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~-l~i~flrpa~~Gd~l~a~a~vi~~------Gr~~~~~~v~i~~~~~~  125 (183)
                      .+||-..++++-...   . ...++......- -+++|++|+..||+|+++.+|+..      ++.+..+++++++    
T Consensus       587 ia~G~l~~sl~~~l~---~-~~~~~~~~~~~g~~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~n----  658 (675)
T PRK11563        587 VAHGYFVLSAAAGLF---V-DPAPGPVLANYGLENLRFLTPVKPGDTIQVRLTCKRKTPRRQAPYGVVRWDVEVTN----  658 (675)
T ss_pred             eeCHHHHHHHHHHHh---h-ccCccchhhhcccceEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEEE----
Confidence            678887777665432   1 111111111111 179999999999999999999955      1247888888888    


Q ss_pred             cCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          126 QSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                                           ++|++|.++..++++
T Consensus       659 ---------------------q~G~~V~~~~~~~lv  673 (675)
T PRK11563        659 ---------------------QDGELVATYDILTLV  673 (675)
T ss_pred             ---------------------CCCCEEEEEEEHHhc
Confidence                                 789999999988773

>TIGR01749 fabA beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA

Probab=94.24  E-value=2.5  Score=34.45  Aligned_cols=93  Identities=5%  Similarity=-0.058  Sum_probs=55.2

Q ss_pred             EEEEEeC--C-----EEEEEEEcCCCCc---C--CCCcccHHHHH--HHHHHHHHHHHHHhcCCc-eeEEEEEeEEEecC
Q 030085           28 ELEELTP--E-----RIIGCFRVTQNSC---Q--PFKVLHGGVSA--LIAESLASMGAHMASGFK-RVAGVQLTINHLKS   92 (183)
Q Consensus        28 ~~~~~~~--g-----~v~~~m~v~~~~~---N--p~G~lHGG~~a--~LaD~A~g~a~~~~~~~~-~~vTv~l~i~flrp   92 (183)
                      ++.++++  |     .++++..++++.-   .  |..-+-=|++.  ++|=.++.++........ ....++ +..|.++
T Consensus        36 ~V~~~~~~gG~~~~g~i~a~k~Vs~~e~ff~gHFp~~PvmPG~L~iEamAQ~~~~~~~~~~~~~~g~l~gi~-~~kfr~~  114 (169)
T TIGR01749        36 RIVEISETGGKFGKGYVEAELDIRPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFFLGWLGGPGRGRALGVG-EVKFTGQ  114 (169)
T ss_pred             EEEEEecCCCcccccEEEEEEEcCCCCcceeCCCCCCCcCchHHHHHHHHHHHHHHHhccccCCceEEeecc-EEEEccC
Confidence            4556666  3     7898888888642   1  22122234432  233333322221111112 234444 8999999


Q ss_pred             CCCCCEE-EEEEEEEEe---CCcEEEEEEEEEE
Q 030085           93 AELGDLV-RAVATPINL---GKTIQVWQVRLWK  121 (183)
Q Consensus        93 a~~Gd~l-~a~a~vi~~---Gr~~~~~~v~i~~  121 (183)
                      +.+|+.+ ..+.++.+.   .+.+..++++++-
T Consensus       115 v~Pgd~~~~l~v~i~~~~~~~~~~~~~~~~i~v  147 (169)
T TIGR01749       115 VLPTAKKVTYRIHFKRVINRRLVMGIADGEVLV  147 (169)
T ss_pred             EecCCeEEEEEEEEEEEeecCCcEEEEEEEEEE
Confidence            9999885 788887774   4568999999995

This enzyme, FabA, shows overlapping substrate specificity with FabZ with regard to chain length in fatty acid biosynthesis. It is commonly designated 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) as if it were specific for that chain length, but its specificity is broader; it is active even in the initiation of fatty acid biosynthesis. This enzyme can also isomerize trans-2-decenoyl-ACP to cis-3-decenoyl-ACP to bypass reduction by FabI and instead allow biosynthesis of unsaturated fatty acids. FabA cannot elongate unsaturated fatty acids.

>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]

Probab=94.24  E-value=0.15  Score=45.31  Aligned_cols=81  Identities=12%  Similarity=0.066  Sum_probs=62.2

Q ss_pred             CCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCC
Q 030085           50 PFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDD  129 (183)
Q Consensus        50 p~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~  129 (183)
                      ..--++||-+++-+=.|   |..+ .+. .-+-=+++.-||+|...-++|.-..+.+|-||+...-+|+.+         
T Consensus        30 g~~~vFGGqvvaQAL~A---a~~T-V~~-~r~vhSlh~yFl~pgd~~~pi~y~Ve~lRdG~sfs~rrV~ai---------   95 (289)
T COG1946          30 GLRRVFGGQVVAQALVA---ALRT-VPE-DRVVHSLHSYFLRPGDPEQPIIYDVERLRDGRSFSTRRVDAI---------   95 (289)
T ss_pred             CCccccccchHHHHHHH---HHhh-cCC-CCCcceehhhhcCCCCcCCceEEEEEeccCCCceEeEEEEEE---------
Confidence            34567888887765432   2222 232 233446777999999999899999999999999999999998         


Q ss_pred             CCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          130 GRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                                       .+|++|.++++.|.+
T Consensus        96 -----------------Q~g~~If~~~ASF~~  110 (289)
T COG1946          96 -----------------QHGKLIFSATASFQV  110 (289)
T ss_pred             -----------------ECCEEEEEEEeeccC
Confidence                             469999999999973

>PLN02868 acyl-CoA thioesterase family protein

Probab=94.09  E-value=0.38  Score=43.79  Aligned_cols=81  Identities=10%  Similarity=-0.023  Sum_probs=63.1

Q ss_pred             cccHHHHHHHHHHHHHHHHHHh-c-CC--ceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCC
Q 030085           53 VLHGGVSALIAESLASMGAHMA-S-GF--KRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSD  128 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~g~a~~~~-~-~~--~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~  128 (183)
                      .+|=.+++.+.|...-..+... . ..  ...++++-+|.|.+|....+.+..+.+..+.|.--++.+++||+       
T Consensus       326 ~~~~a~lay~sD~~~l~~~l~~~~~~~~~~~~aSLdhsi~Fh~~~~~d~W~l~~~~s~~a~~gr~~~~g~l~~-------  398 (413)
T PLN02868        326 ALHRCVAAYASDLIFLGTSLNPHRTKGLKFAALSLDHSMWFHRPFRADDWLLFVIVSPAAHNGRGFATGHMFN-------  398 (413)
T ss_pred             HHHHHHHHHHhhhhhhHhhhccccCCCCceEEEEcceeEEEecCCCCCceEEEEEECCccCCCcceEEEEEEC-------
Confidence            5788899999996542222211 1 11  23678888999999999999999999999998888888999998       


Q ss_pred             CCCCCCCCCCcCCCCCCCCCCcEEEEEEEE
Q 030085          129 DGRDHDADHHHHNNSTSSSSSIMISSSTVT  158 (183)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T  158 (183)
                                        .+|++||+++--
T Consensus       399 ------------------~~G~LvAs~~Qe  410 (413)
T PLN02868        399 ------------------RKGELVVSLTQE  410 (413)
T ss_pred             ------------------CCCCEEEEEEee
Confidence                              789999998753

>COG0764 FabA 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]

Probab=93.18  E-value=3.7  Score=32.96  Aligned_cols=108  Identities=15%  Similarity=-0.014  Sum_probs=70.7

Q ss_pred             EEEE-EeCC-EEEEEEEcCC--CCc---CCCCcccHHHHHHHHHH-HHHHHHHHhcC--CceeEEEEE-eEEEecCCCCC
Q 030085           28 ELEE-LTPE-RIIGCFRVTQ--NSC---QPFKVLHGGVSALIAES-LASMGAHMASG--FKRVAGVQL-TINHLKSAELG   96 (183)
Q Consensus        28 ~~~~-~~~g-~v~~~m~v~~--~~~---Np~G~lHGG~~a~LaD~-A~g~a~~~~~~--~~~~vTv~l-~i~flrpa~~G   96 (183)
                      ++.+ .+++ .+.+...++.  ++.   .|.--+-.|++-.=+=. ++|+.+.....  ++.+.-+.+ ++.|.+|+.+|
T Consensus        24 rv~~~~~~g~~i~a~k~Vt~nepfF~gHFP~~PimPGVLileamaQ~~g~~~~~~~~~~~~~~~~~gid~~kF~~~V~PG  103 (147)
T COG0764          24 RVLEIDEEGKRIVAIKNVTINEPFFTGHFPGDPIMPGVLILEAMAQAAGFLLGWLLGNKGKLGYFLGIDNAKFKRPVLPG  103 (147)
T ss_pred             eeeeeccCCcEEEEEEccCCCCCeeCCcCCCCCCcchhHHHHHHHHHHHHHHhccccCCccEEEEEEecceeecCccCCC
Confidence            4444 3343 5656655544  333   35666778887543311 11222222222  123444444 79999999999


Q ss_pred             CEEEEEEEEEEeC-CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           97 DLVRAVATPINLG-KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        97 d~l~a~a~vi~~G-r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      |.+..+.+.++.+ +.+....++.+                          -+|++++.++.+++.
T Consensus       104 d~l~l~~~~~~~~~~~~~~~~~~a~--------------------------Vdg~~v~~a~~~~~~  143 (147)
T COG0764         104 DQLELEVKLLKSRRLGIGKAKGVAT--------------------------VDGKVVAEAELLFAG  143 (147)
T ss_pred             CEEEEEEEEEEecccceEEEEEEEE--------------------------ECCEEEEEEEEEEEE
Confidence            9999999999999 88888888887                          468999999999884

>PF03756 AfsA: A-factor biosynthesis hotdog domain; InterPro: IPR005509 The AfsA family are key enzymes in A-factor biosynthesis, which is essential for streptomycin production and resistance

Probab=92.41  E-value=3.8  Score=31.13  Aligned_cols=100  Identities=12%  Similarity=0.041  Sum_probs=62.0

Q ss_pred             CCEEEEEEEcCCCC--cC-CCCcccHHHHHHHHHHH---HHHHHHHhc--C-CceeEEEEEeEEEecCCCCCCEEEEEEE
Q 030085           34 PERIIGCFRVTQNS--CQ-PFKVLHGGVSALIAESL---ASMGAHMAS--G-FKRVAGVQLTINHLKSAELGDLVRAVAT  104 (183)
Q Consensus        34 ~g~v~~~m~v~~~~--~N-p~G~lHGG~~a~LaD~A---~g~a~~~~~--~-~~~~vTv~l~i~flrpa~~Gd~l~a~a~  104 (183)
                      ++...+.+.+...|  .. ..+--|-|.+  |+|.+   +-+.++...  + +...+-.+++++|.+++....++.++++
T Consensus        19 ~~~~~~~~~~p~~h~~~~dh~~dh~~gml--l~Ea~RQa~~~~~h~~~~vp~~~~~~~~~l~~~f~~~~e~~~P~~~~~~   96 (132)
T PF03756_consen   19 DGRFRARLQWPRSHPFFFDHPGDHVPGML--LLEAARQAGIALAHRFYGVPLDHQFVLTSLDFTFSRFAELDVPADLTVR   96 (132)
T ss_pred             CCEEEEEEEcCCCCccccCCCCCccChHH--HHHHHHHHHHHhhccccCCCCCceEEEEEEEEEEccccccCCCEEEEEE
Confidence            45666666665554  22 2233344443  45544   322222222  2 2456778999999999876667777777


Q ss_pred             EEEeCC-----cEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          105 PINLGK-----TIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       105 vi~~Gr-----~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      +.....     +-..++++++.                          +|+++|+++.++-|
T Consensus        97 ~~~~~~~~~~~~~~~~~v~~~q--------------------------~g~~~a~~~~~~tc  132 (132)
T PF03756_consen   97 ITCRDRRGGRPRGLRFRVTVSQ--------------------------GGRVVATASMTFTC  132 (132)
T ss_pred             EEeccccCCccceEEEEEEEEE--------------------------CCEEEEEEEEEEEC
Confidence            664333     46677888884                          69999999999865

This domain is distantly related to the thioester dehydratase FabZ family and therefore has a Hotdog domain [].

>PLN02864 enoyl-CoA hydratase

Probab=90.89  E-value=3  Score=37.06  Aligned_cols=63  Identities=17%  Similarity=0.109  Sum_probs=47.7

Q ss_pred             ceeEEEEEeEEEecCCCCCCEEEEEEEEEEe---CCc-EEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEE
Q 030085           78 KRVAGVQLTINHLKSAELGDLVRAVATPINL---GKT-IQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMIS  153 (183)
Q Consensus        78 ~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~---Gr~-~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA  153 (183)
                      .+.+=.+-+|.|.||+..|+.+.+++++...   |+. +..++.++++.                        .+|++++
T Consensus        92 ~~lVHgeq~i~~~rPlp~~~~l~~~~~v~~v~dkG~ga~v~~~~~~~d~------------------------~~Ge~v~  147 (310)
T PLN02864         92 SLLLHGQQYIEIYKPIPSSASVRNKVSIAGLHDKGKAAILELETLSYEK------------------------DSGELLC  147 (310)
T ss_pred             hheeeccceEEEECCCCCCCEEEEEEEEEEEEeCCCcEEEEEEEEEEeC------------------------CCCcEEE
Confidence            4567777789999999999999999998744   543 23455556551                        4799999


Q ss_pred             EEEEEEEEecC
Q 030085          154 SSTVTLLCNLP  164 (183)
Q Consensus       154 ~~t~T~~~~~p  164 (183)
                      +.+.|+++.-.
T Consensus       148 t~~st~~~Rg~  158 (310)
T PLN02864        148 MNRSTIFLRGA  158 (310)
T ss_pred             EEEEEEEEeCC
Confidence            99999997653

>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]

Probab=90.67  E-value=2.3  Score=37.93  Aligned_cols=86  Identities=13%  Similarity=0.050  Sum_probs=63.3

Q ss_pred             cccHHHHHHHHHHHHHH-HHHHhc-----CCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEccccc
Q 030085           53 VLHGGVSALIAESLASM-GAHMAS-----GFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQ  126 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~g~-a~~~~~-----~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~  126 (183)
                      .+|=-.++-+-|...=- |.....     +.-.++++|=+|-|+||.+.+|.|....+.-.....-+.+++++++     
T Consensus       193 ~~~~~lLay~SD~~ll~tal~~Hg~~~~~~~~~~aSLDHs~wFhrp~~~ddWlLy~~~sp~A~~~rgl~~G~lf~-----  267 (289)
T COG1946         193 RLHQALLAYLSDFTLLDTALQPHGLGFLTPGIQVASLDHSMWFHRPFRLDDWLLYAQESPSASGGRGLVRGQLFD-----  267 (289)
T ss_pred             HHHHHHHHHhccchhhhhhhccCCCccccCcceEeeccceEEEeccccCCCEEEEEeeCCcccCCcceeeeEEEc-----
Confidence            56777788777865311 111111     2346889999999999999999988776666555555888999998     


Q ss_pred             CCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEec
Q 030085          127 SDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNL  163 (183)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~  163 (183)
                                          .+|+|||+..--.++..
T Consensus       268 --------------------r~G~LiA~~~QEG~~r~  284 (289)
T COG1946         268 --------------------RDGQLIASVVQEGLIRY  284 (289)
T ss_pred             --------------------CCCCEEEEEeeeEEEec
Confidence                                78999999988877543

>PF02551 Acyl_CoA_thio: Acyl-CoA thioesterase; InterPro: IPR003703 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH)

Probab=88.95  E-value=3.3  Score=32.95  Aligned_cols=54  Identities=6%  Similarity=0.008  Sum_probs=40.9

Q ss_pred             eeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEE-EcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEE
Q 030085           79 RVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW-KVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTV  157 (183)
Q Consensus        79 ~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~  157 (183)
                      ..+|+|=+|-|.||.+..|.+..+-+-......=+++++++| +                         .+|+|||+..-
T Consensus        74 ~~vSlDHs~wFHrpfr~ddWlLY~~~sp~A~~~Rgl~~G~~f~~-------------------------q~G~Lvas~~Q  128 (131)
T PF02551_consen   74 FQVSLDHSMWFHRPFRADDWLLYAIESPSASGGRGLVRGRFFDT-------------------------QDGELVASVVQ  128 (131)
T ss_dssp             EEEEEEEEEEE-S--BTTS-EEEEEEEEEEETTEEEEEECCEEE-------------------------CTTEEEEEEEE
T ss_pred             cEEecceeEEEcCCCCCCCCEEEEEEcCccccCcccccCceEec-------------------------CCCCEEEEEec
Confidence            345999999999999999988877777666666688999999 6                         78999998653

They consequently have the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. They may also be involved in the metabolic regulation of peroxisome proliferation. Thioesters play a central role in cells as they participate in metabolism, membrane synthesis, signal transduction, and gene regulation. Thioesterases catalyse the hydrolysis of thioesters to the thiol and carboxylic acid components. Many thioesterases have a hot dog fold, including YciA from Escherichia coli and its close sequence homologue HI0827 from Haemophilus influenzae (HiYciA) []. In Helicobacter pylori, YbgC also belongs to the hot-dog family of proteins, with a epsilongamma tetrameric arrangement []. YbgC proteins are bacterial acyl-CoA thioesterases associated with the Tol-Pal system. This system is important for cell envelope integrity and is part of the cell division machinery. However, the E. coli thioesterase II reveals a new tertiary fold: a 'double hot dog'. It has an internal repeat with a basic unit that is structurally similar to the recently described beta-hydroxydecanoyl thiol ester dehydrase []. ; GO: 0016291 acyl-CoA thioesterase activity, 0006637 acyl-CoA metabolic process; PDB: 1C8U_B 1TBU_B 3U0A_B.

>PF14765 PS-DH: Polyketide synthase dehydratase; PDB: 3KG7_D 3KG9_A 3KG8_B 3HRR_A 3HRQ_A 3EL6_A 3KG6_B 2VZ8_A 2VZ9_A

Probab=86.93  E-value=13  Score=31.10  Aligned_cols=101  Identities=12%  Similarity=0.147  Sum_probs=68.3

Q ss_pred             CEEEEEEEcCCCCcC-C-CCcccHHHHHHHHHHHHHHHHHHh----cCCceeEEEEE-eEEEec-CCCCCCEEEEEEEEE
Q 030085           35 ERIIGCFRVTQNSCQ-P-FKVLHGGVSALIAESLASMGAHMA----SGFKRVAGVQL-TINHLK-SAELGDLVRAVATPI  106 (183)
Q Consensus        35 g~v~~~m~v~~~~~N-p-~G~lHGG~~a~LaD~A~g~a~~~~----~~~~~~vTv~l-~i~flr-pa~~Gd~l~a~a~vi  106 (183)
                      +.+.+++.+.+.... . .-.+|.    +++|.++-.++...    .....++-+.+ ++.+.+ +...++.+.+.++..
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~l~P----~llD~~lq~~~~~~~~~~~~~~~~lP~~i~~~~~~~~~~~~~~~~~~~~~~~  257 (295)
T PF14765_consen  182 GEALAEVRLPDDPASDPDPFVLHP----ALLDAALQAAGLALWEDDDRGRVFLPVSIERIRIFRAPPPPGDRLYVYARLV  257 (295)
T ss_dssp             SEEEEEEECGTTTGGGGGGSSS-H----HHHHHHHHGHGCCHTSTTTTTSEEEEEEEEEEEESSS--SSTSEEEEEEEEE
T ss_pred             ccceEEEEEEeeccCCCCceeECH----HHHHHHHHHHHHHhccccCCCCEEcccEeCEEEEEeccCCCCCEEEEEEEEe
Confidence            777777777754331 1 234455    57787776332111    12245666777 577774 567788999999999


Q ss_pred             EeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecC
Q 030085          107 NLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLP  164 (183)
Q Consensus       107 ~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p  164 (183)
                      ..+.....+++.++|                         ++|++++..+.--+..++
T Consensus       258 ~~~~~~~~~dv~v~d-------------------------~~G~~~~~~~gl~~~~~~  290 (295)
T PF14765_consen  258 KSDDDTITGDVTVFD-------------------------EDGRVVAELEGLTFRRVP  290 (295)
T ss_dssp             STTTTEEEEEEEEEE-------------------------TTSBEEEEEEEEEEEEEE
T ss_pred             cccceEEEEEEEEEC-------------------------CCCCEEEEEccEEEEECC
Confidence            889999999999999                         789999998887664544

>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []

Probab=81.04  E-value=29  Score=29.53  Aligned_cols=97  Identities=8%  Similarity=-0.074  Sum_probs=61.6

Q ss_pred             CCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeC-CcE
Q 030085           34 PERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLG-KTI  112 (183)
Q Consensus        34 ~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~G-r~~  112 (183)
                      +......++++...+...|-+.=-...-++-.+......     ....-.++.|+|.+.+..||.|.+...+.... ...
T Consensus       163 ~~~~~~~~~vr~sDiD~N~HVNN~~Yl~w~~d~lp~~~~-----~~~~~~~i~I~y~~E~~~gd~i~~~~~~~~~~~~~~  237 (261)
T PF01643_consen  163 EPEFEKEFTVRYSDIDMNGHVNNARYLDWALDALPEEFL-----EKYQIKSIDINYKKEIRYGDTITSYTEVEKDEEEDG  237 (261)
T ss_dssp             TTSECEEEE--GGGEETTTCE-HHHHHHHHHCCS-HHHH-----CCEEEEEEEEEE-S--BTT-EEEEEEEEEEECCTTE
T ss_pred             hhheeecccccHHHCCCCCCcCHHHHHHHHHHhCcchhh-----ccCCcEEEEEEEccccCCCCEEEEEEEEcccccCCc
Confidence            345667788888777777788776666655444322221     23556789999999999999999888876443 445


Q ss_pred             EEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          113 QVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       113 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      ..+.-.|++                         ++|+.+|.+...|.
T Consensus       238 ~~~~h~i~~-------------------------~~g~~~~~~~~~W~  260 (261)
T PF01643_consen  238 LSTLHEIRN-------------------------EDGEEVARARTEWQ  260 (261)
T ss_dssp             EEEEEEEEC-------------------------T-TCEEEEEEEEEE
T ss_pred             eEEEEEEEc-------------------------CCCceEEEEEEEEc
Confidence            566777886                         45999999988764

These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	183
1sc0_A	138	X-Ray Structure Of Yb61_haein Northeast Structural		2e-12
2b6e_A	146	X-Ray Crystal Structure Of Protein Hi1161 From Haem		2e-12
1sbk_A	144	X-Ray Structure Of Ydii_ecoli Northeast Structural		2e-11
1vh5_A	148	Crystal Structure Of A Putative Thioesterase Length		2e-11
1vh9_A	149	Crystal Structure Of A Putative Thioesterase Length		1e-07
3r3d_A	151	Crystal Structure Of Arthrobacter Sp. Strain Su 4-H		1e-04
1q4s_A	151	Crystal Structure Of Arthrobacter Sp. Strain Su 4-H		2e-04
3r34_A	151	Crystal Structure Of Arthrobacter Sp. Strain Su 4-H		5e-04
3r36_B	151	Crystal Structure Of Arthrobacter Sp. Strain Su 4-H		6e-04

>pdb|1SC0|A Chain A, X-Ray Structure Of Yb61_haein Northeast Structural Genomics Consortium Target Ir63 Length = 138

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 19  DAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASM-GAHMASGF 77
           ++ +  +G E+     + I     V   + QPF VLHGGVS  +AE++ S+ G+      
Sbjct: 18  NSAVSHLGIEISAFGEDWIEATXPVDHRTXQPFGVLHGGVSVALAETIGSLAGSLCLEEG 77
Query: 78  KRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRL 119
           K V G+ +  NHL+    G  V A ATPINLG+ IQVWQ+ +
Sbjct: 78  KTVVGLDINANHLRPVRSGK-VTARATPINLGRNIQVWQIDI 118

>pdb|2B6E|A Chain A, X-Ray Crystal Structure Of Protein Hi1161 From Haemophilus Influenzae. Northeast Structural Genomics Consortium Target Ir63. Length = 146

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 19  DAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASM-GAHMASGF 77
           ++ +  +G E+     + I     V   + QPF VLHGGVS  +AE++ S+ G+      
Sbjct: 18  NSAVSHLGIEISAFGEDWIEATXPVDHRTXQPFGVLHGGVSVALAETIGSLAGSLCLEEG 77
Query: 78  KRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRL 119
           K V G+ +  NHL+    G  V A ATPINLG+ IQVWQ+ +
Sbjct: 78  KTVVGLDINANHLRPVRSGK-VTARATPINLGRNIQVWQIDI 118

>pdb|1SBK|A Chain A, X-Ray Structure Of Ydii_ecoli Northeast Structural Genomics Consortium Target Er29. Length = 144

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 43  VTQNSCQPFKVLHGGVSALIAESLASMGAHMAS-GFKRVAGVQLTINHLKSAELGDLVRA 101
           V   + QPF +LHGG S ++AES+ S+  ++ + G ++V G+++  NH++SA  G  VR 
Sbjct: 42  VDSRTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREGR-VRG 100
Query: 102 VATPINLGKTIQVWQVRLWKVK 123
           V  P++LG   QVWQ+ ++  K
Sbjct: 101 VCKPLHLGSRHQVWQIEIFDEK 122

>pdb|1VH5|A Chain A, Crystal Structure Of A Putative Thioesterase Length = 148

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 60/103 (58%), Gaps = 5/103 (4%)
Query: 25  IGF---ELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS-GFKRV 80
           +GF     E +  + +     V   + QPF +LHGG S ++AES+ S+  ++ + G ++V
Sbjct: 23  VGFLDIRFEHIGDDTLEATMPVDSRTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKV 82
Query: 81  AGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVK 123
            G+++  NH++SA  G  VR V  P++LG   QVWQ+ ++  K
Sbjct: 83  VGLEINANHVRSAREGR-VRGVCKPLHLGSRHQVWQIEIFDEK 124

>pdb|1VH9|A Chain A, Crystal Structure Of A Putative Thioesterase Length = 149

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 49  QPFKVLHGGVSALIAESLASM-GAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPIN 107
           QPF +LHGG SA +AE+L SM G  M    + V G +L   H +    G  VR V  P++
Sbjct: 50  QPFGLLHGGASAALAETLGSMAGFMMTRDGQCVVGTELNATHHRPVSEGK-VRGVCQPLH 108
Query: 108 LGKTIQVWQV 117
           LG+  Q W++
Sbjct: 109 LGRQNQSWEI 118

>pdb|3R3D|A Chain A, Crystal Structure Of Arthrobacter Sp. Strain Su 4-Hydroxybenzoyl Coa Thioesterase Mutant T77s Complexed With 4-Hydroxyphenacyl Coa Length = 151

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 25  IGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQ 84
           +GF ++E+TPER      VT    Q + ++HGG    +AE LAS         K +  V 
Sbjct: 34  VGFVIDEMTPERATASVEVTDTLRQRWGLVHGGAYCALAEMLASEATVAVVHEKGMMAVG 93
Query: 85  LTINH---LKSAELGDLVRAVATPINLGKTIQVWQVRL 119
            + NH    +  + G  VRA A  I+ G T   W V L
Sbjct: 94  QS-NHTSFFRPVKEGH-VRAEAVRIHAGSTTWFWDVSL 129

>pdb|1Q4S|A Chain A, Crystal Structure Of Arthrobacter Sp. Strain Su 4-Hydroxybenzoyl Coa Thioesterase Complexed With Coa And 4-Hydroxybenzoic Acid Length = 151

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 25  IGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQ 84
           +GF ++E+TPER      VT    Q + ++HGG    +AE LA+         K +  V 
Sbjct: 34  VGFVIDEMTPERATASVEVTDTLRQRWGLVHGGAYCALAEMLATEATVAVVHEKGMMAVG 93
Query: 85  LTINH---LKSAELGDLVRAVATPINLGKTIQVWQVRL 119
            + NH    +  + G  VRA A  I+ G T   W V L
Sbjct: 94  QS-NHTSFFRPVKEGH-VRAEAVRIHAGSTTWFWDVSL 129

>pdb|3R34|A Chain A, Crystal Structure Of Arthrobacter Sp. Strain Su 4-Hydroxybenzoyl Coa Thioesterase Mutant E73d Complexed With Coa Length = 151

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 25  IGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQ 84
           +GF ++E+TPER      VT    Q + ++HGG    +A+ LA+         K +  V 
Sbjct: 34  VGFVIDEMTPERATASVEVTDTLRQRWGLVHGGAYCALADMLATEATVAVVHEKGMMAVG 93
Query: 85  LTINH---LKSAELGDLVRAVATPINLGKTIQVWQVRL 119
            + NH    +  + G  VRA A  I+ G T   W V L
Sbjct: 94  QS-NHTSFFRPVKEGH-VRAEAVRIHAGSTTWFWDVSL 129

>pdb|3R36|B Chain B, Crystal Structure Of Arthrobacter Sp. Strain Su 4-Hydroxybenzoyl Coa Thioesterase Mutant E73q Complexed With 4-Hydroxybenzoic Acid Length = 151

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 25  IGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQ 84
           +GF ++E+TPER      VT    Q + ++HGG    +A+ LA+         K +  V 
Sbjct: 34  VGFVIDEMTPERATASVEVTDTLRQRWGLVHGGAYCALAQMLATEATVAVVHEKGMMAVG 93
Query: 85  LTINH---LKSAELGDLVRAVATPINLGKTIQVWQVRL 119
            + NH    +  + G  VRA A  I+ G T   W V L
Sbjct: 94  QS-NHTSFFRPVKEGH-VRAEAVRIHAGSTTWFWDVSL 129

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	183
1o0i_A	138	Hypothetical protein HI1161; structural genomics,	2e-25
1vh9_A	149	P15, hypothetical protein YBDB; structural genomic	1e-23
3s4k_A	144	Putative esterase RV1847/MT1895; seattle structura	2e-23
1vh5_A	148	Hypothetical protein YDII; PSI, protein structure	3e-23
1q4t_A	151	Thioesterase; hot-DOG, hydrolase; HET: 4CO; 1.60A	2e-21
1wlu_A	136	PAAI protein, phenylacetic acid degradation protei	2e-21
1zki_A	133	Hypothetical protein PA5202; structural genomics,	4e-21
3gek_A	146	Putative thioesterase YHDA; structure genomics, NE	2e-20
2fs2_A	151	Phenylacetic acid degradation protein PAAI; operon	5e-20
3nwz_A	176	BH2602 protein; structural genomics, PSI-biology,	2e-19
3lbe_A	163	Putative uncharacterized protein SMU.793; hypothet	2e-19
2qwz_A	159	Phenylacetic acid degradation-related protein; put	2e-19
3e1e_A	141	Thioesterase family protein; structural genomics,	1e-17
2h4u_A	145	Thioesterase superfamily member 2; structural geno	1e-15
3f5o_A	148	Thioesterase superfamily member 2; hotdog fold, hy	2e-15
3e29_A	144	Uncharacterized protein Q7WE92_borbr; Q7WE92 NESG,	2e-14
3dkz_A	142	Thioesterase superfamily protein; Q7W9W5, borpa, P	6e-14
2pim_A	141	Phenylacetic acid degradation-related protein; thi	5e-12
2hbo_A	158	Hypothetical protein (NP_422103.1); thioesterase/t	1e-11
3f1t_A	148	Uncharacterized protein Q9I3C8_pseae; PAR319A, NES	1e-10
3hdu_A	157	Putative thioesterase; structural genomics, joint	1e-10
3e8p_A	164	Uncharacterized protein; X-RAY Q8E9M7 SOR246 NESG	1e-10
1ixl_A	131	Hypothetical protein PH1136; alpha+beta, hot-DOG-f	6e-09
3lw3_A	145	HP0420 homologue; hotdog-fold, structural genomics	3e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-05
1yoc_A	147	Hypothetical protein PA1835; structural genomics,	2e-04

>1o0i_A Hypothetical protein HI1161; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.70A {Haemophilus influenzae} SCOP: d.38.1.5 PDB: 1sc0_A 2b6e_A 3lz7_A Length = 138

 Score = 94.5 bits (235), Expect = 2e-25
 Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 2/104 (1%)

Query: 18  PDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHM-ASG 76
            ++ +  +G E+     + I     V   + QPF VLHGGVS  +AE++ S+   +    
Sbjct: 17  SNSAVSHLGIEISAFGEDWIEATMPVDHRTMQPFGVLHGGVSVALAETIGSLAGSLCLEE 76

Query: 77  FKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW 120
            K V G+ +  NHL+    G  V A ATPINLG+ IQVWQ+ + 
Sbjct: 77  GKTVVGLDINANHLRPVRSGK-VTARATPINLGRNIQVWQIDIR 119

>1vh9_A P15, hypothetical protein YBDB; structural genomics, unknown function; 2.15A {Escherichia coli} SCOP: d.38.1.5 Length = 149

 Score = 89.9 bits (223), Expect = 1e-23
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 2/100 (2%)

Query: 22  LKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKR-V 80
           +  +G     L  + +     V   + QPF +LHGG SA +AE+L SM   M +   + V
Sbjct: 23  VAHLGIVYTRLGDDVLEAEMPVDTRTHQPFGLLHGGASAALAETLGSMAGFMMTRDGQCV 82

Query: 81  AGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW 120
            G +L   H +    G  VR V  P++LG+  Q W++ ++
Sbjct: 83  VGTELNATHHRPVSEGK-VRGVCQPLHLGRQNQSWEIVVF 121

>3s4k_A Putative esterase RV1847/MT1895; seattle structural genomics center for infectious disease, S hydrolase; 1.70A {Mycobacterium tuberculosis} Length = 144

 Score = 89.6 bits (222), Expect = 2e-23
 Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 11/113 (9%)

Query: 23  KAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHM----ASGFK 78
             +G +  EL P+       V     Q   V+HGGV   + ES+ASM A           
Sbjct: 23  SELGLQFTELGPDGARAQLDVRPKLLQLTGVVHGGVYCAMIESIASMAAFAWLNSHGEGG 82

Query: 79  RVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGR 131
            V GV    + ++S   G +V   A P++ G+  Q+W V       +  D  R
Sbjct: 83  SVVGVNNNTDFVRSISSG-MVYGTAEPLHRGRRQQLWLV------TITDDTDR 128

>1vh5_A Hypothetical protein YDII; PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; 1.34A {Escherichia coli} SCOP: d.38.1.5 PDB: 1vi8_A 1sbk_A Length = 148

 Score = 89.2 bits (221), Expect = 3e-23
 Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 2/100 (2%)

Query: 22  LKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS-GFKRV 80
           +  +    E +  + +     V   + QPF +LHGG S ++AES+ S+  ++ + G ++V
Sbjct: 23  VGFLDIRFEHIGDDTLEATMPVDSRTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKV 82

Query: 81  AGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW 120
            G+++  NH++SA  G  VR V  P++LG   QVWQ+ ++
Sbjct: 83  VGLEINANHVRSAREGR-VRGVCKPLHLGSRHQVWQIEIF 121

>1q4t_A Thioesterase; hot-DOG, hydrolase; HET: 4CO; 1.60A {Arthrobacter SP} SCOP: d.38.1.5 PDB: 1q4s_A* 1q4u_A* 3r37_A* 3r36_B* 3r3d_A* 3r34_A* 3r35_A* 3r3f_A* 3r32_A* 3r3a_A* 3r3b_A* 3r3c_A* Length = 151

 Score = 84.7 bits (209), Expect = 2e-21
 Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 9/120 (7%)

Query: 14  RIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHM 73
            +A        +GF ++E+TPER      VT    Q + ++HGG    +AE LA+     
Sbjct: 23  PVAYEQTLDGTVGFVIDEMTPERATASVEVTDTLRQRWGLVHGGAYCALAEMLATEATVA 82

Query: 74  --ASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGR 131
                     G     +  +  + G  VRA A  I+ G T   W V       ++ D GR
Sbjct: 83  VVHEKGMMAVGQSNHTSFFRPVKEGH-VRAEAVRIHAGSTTWFWDV------SLRDDAGR 135

>1wlu_A PAAI protein, phenylacetic acid degradation protein PAAI; thioesterase, hot DOG fold, S genomics; 1.45A {Thermus thermophilus HB8} SCOP: d.38.1.5 PDB: 1j1y_A 1wlv_A* 1wm6_A 1wn3_A* 2dsl_A Length = 136

 Score = 84.0 bits (208), Expect = 2e-21
 Identities = 19/113 (16%), Positives = 44/113 (38%), Gaps = 10/113 (8%)

Query: 19  DAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFK 78
           D  ++A+G ++  L P   +    V  +        HGG    +A+S  ++ ++      
Sbjct: 3   DPFMEALGLKVLHLAPGEAVVAGEVRADHLNLHGTAHGGFLYALADSAFALASN---TRG 59

Query: 79  RVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGR 131
               +   +++ +    G  V A A  +NL +    ++V +         +G+
Sbjct: 60  PAVALSCRMDYFRPLGAGARVEARAVEVNLSRRTATYRVEVV-------SEGK 105

>1zki_A Hypothetical protein PA5202; structural genomics, PSI, protein ST initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Pseudomonas aeruginosa} SCOP: d.38.1.5 Length = 133

 Score = 83.1 bits (206), Expect = 4e-21
 Identities = 14/116 (12%), Positives = 40/116 (34%), Gaps = 10/116 (8%)

Query: 18  PDAPL-KAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAH-MAS 75
             +   + +G +   L          +  +      V+HGG    + +    +       
Sbjct: 12  MISAYSELVGLDPVSLGDGVAEVRLPMAAHLRNRGGVMHGGALFSLMDVTMGLACSSSHG 71

Query: 76  GFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGR 131
             ++   ++  IN++++   G++ R VA  ++ G+   V +  +           +
Sbjct: 72  FDRQSVTLECKINYIRAVADGEV-RCVARVLHAGRRSLVVEAEVR-------QGDK 119

>3gek_A Putative thioesterase YHDA; structure genomics, NESG, KR113, Q9CHK5_lacla, lactococcus L YHDA, structural genomics, PSI-2; 2.24A {Lactococcus lactis subsp} Length = 146

 Score = 81.7 bits (201), Expect = 2e-20
 Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 1/96 (1%)

Query: 25  IGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKR-VAGV 83
              +       +      ++    QP   L+GG S  +AE  A M ++     +    G 
Sbjct: 18  ENSDKFVSKIYKFSSKMILSDFHAQPQGFLNGGASLALAEITAGMASNAIGSGQYFAFGQ 77

Query: 84  QLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRL 119
            +  NHL   +    V A    +  GK   VW++++
Sbjct: 78  SINANHLNPKKCEGFVNARGLLLKNGKRNHVWEIKI 113

>2fs2_A Phenylacetic acid degradation protein PAAI; operon, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: d.38.1.5 PDB: 1psu_A Length = 151

 Score = 81.0 bits (200), Expect = 5e-20
 Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 17/137 (12%)

Query: 19  DAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFK 78
           DA  KA+G ++  +     +    VT       +  HGG    +A++  +   +  S   
Sbjct: 17  DACAKALGIDIISMDEGFAVVTMTVTAQMLNGHQSCHGGQLFSLADTAFAYACN--SQGL 74

Query: 79  RVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW---------------KVK 123
                  TI+ L+    GD + A A   + GK   V+ + +                ++ 
Sbjct: 75  AAVASACTIDFLRPGFAGDTLTATAQVRHQGKQTGVYDIEIVNQQQKTVALFRGKSHRIG 134

Query: 124 EVQSDDGRDHDADHHHH 140
              + +       HHHH
Sbjct: 135 GTITGEAEGGSHHHHHH 151

>3nwz_A BH2602 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, unknown FUN; HET: COA; 2.57A {Bacillus halodurans} Length = 176

 Score = 80.2 bits (198), Expect = 2e-19
 Identities = 26/134 (19%), Positives = 52/134 (38%), Gaps = 23/134 (17%)

Query: 23  KAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAH-MASGFKRVA 81
                E +E    R      +      P  ++HGG++A + ++      +      +   
Sbjct: 50  SLTQIESQEREDGRFEVRLPIGPLVNNPLNMVHGGITATLLDTAMGQMVNRQLPDGQSAV 109

Query: 82  GVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDG----------- 130
             +L I+++K   +G  +RAVA+ ++ GK   V + +++      +D G           
Sbjct: 110 TSELNIHYVKPG-MGTYLRAVASIVHQGKQRIVVEGKVY------TDQGETVAMGTGSFF 162

Query: 131 ----RDHDADHHHH 140
               R  +  HHHH
Sbjct: 163 VLRSRGLEHHHHHH 176

>3lbe_A Putative uncharacterized protein SMU.793; hypothetical protein, unknown function; HET: COA; 1.70A {Streptococcus mutans} PDB: 3lbb_A* Length = 163

 Score = 79.5 bits (196), Expect = 2e-19
 Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 2/102 (1%)

Query: 18  PDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGF 77
                    F++       +I    V   S   +   HGG    + + ++ + +   S  
Sbjct: 40  LHEIRVFENFDMVSFEKGHVIVTTEVVDKSLNYYGFAHGGYIFTLCDQISGLVSI--STG 97

Query: 78  KRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRL 119
                +Q +IN+LKS +LGD +      ++ G+T +V  V +
Sbjct: 98  FDAVTLQSSINYLKSGKLGDTLLIDGRCVHDGRTTKVVDVTV 139

>2qwz_A Phenylacetic acid degradation-related protein; putative thioesterase, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} Length = 159

 Score = 79.5 bits (196), Expect = 2e-19
 Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 1/101 (0%)

Query: 21  PLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG-FKR 79
           P     F ++ L    I     V +   +P   + G     +A+           G    
Sbjct: 38  PQIQGEFSIDALAKGEITMRLNVQERHLRPGGTVSGPSMFALADVSVYALVLAHLGREAL 97

Query: 80  VAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW 120
                 +++ ++  E G  +   A  + LG+T+ V  + L+
Sbjct: 98  AVTTNASLDFMRKPESGRDLLGQARLLKLGRTLAVGDILLF 138

>3e1e_A Thioesterase family protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Silicibacter pomeroyi} Length = 141

 Score = 74.4 bits (183), Expect = 1e-17
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 6/123 (4%)

Query: 11  QRKRIAVPDAPL-KAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASM 69
           Q+ R +    P+   +G  ++ L P R+  C    +   Q    LH G+ + + +S    
Sbjct: 9   QKVRDSFARQPVMATLGARIDTLLPGRVELCMPYDRALTQQHGFLHAGIVSTVLDSACGY 68

Query: 70  GAH-MASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSD 128
            A  +      V  V+  +N L  AE G+     A  +  G+T+ V     +  ++    
Sbjct: 69  AAFSLMEEEAAVLTVEFKVNFLNPAE-GERFAFRAEVVKPGRTLTVATATAYAFRD---G 124

Query: 129 DGR 131
           + R
Sbjct: 125 EER 127

>2h4u_A Thioesterase superfamily member 2; structural genomics, structural genomics consortium, SGC, hydrolase; 2.20A {Homo sapiens} SCOP: d.38.1.5 Length = 145

 Score = 69.4 bits (170), Expect = 1e-15
 Identities = 21/99 (21%), Positives = 41/99 (41%)

Query: 26  GFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL 85
              L    P ++I   +V +        LHGG++A + +++++M             V +
Sbjct: 32  KITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDM 91

Query: 86  TINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKE 124
            I ++  A+LG+ +   A  +  GKT+    V L     
Sbjct: 92  NITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKAT 130

>3f5o_A Thioesterase superfamily member 2; hotdog fold, hydrolase; HET: UOC COA P6G; 1.70A {Homo sapiens} PDB: 2f0x_A* 2cy9_A Length = 148

 Score = 69.0 bits (169), Expect = 2e-15
 Identities = 25/125 (20%), Positives = 50/125 (40%), Gaps = 1/125 (0%)

Query: 1   MEHSSSSNSKQRKRIAVPDAPLKAIG-FELEELTPERIIGCFRVTQNSCQPFKVLHGGVS 59
           M   + S  +  K +       + +G   L    P ++I   +V +        LHGG++
Sbjct: 1   MTSMTQSLREVIKAMTKARNFERVLGKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLT 60

Query: 60  ALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRL 119
           A + +++++M             V + I ++  A+LG+ +   A  +  GKT+    V L
Sbjct: 61  ATLVDNISTMALLCTERGAPGVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDL 120

Query: 120 WKVKE 124
                
Sbjct: 121 TNKAT 125

>3e29_A Uncharacterized protein Q7WE92_borbr; Q7WE92 NESG, structural genomics, PSI-2, Pro structure initiative; 2.40A {Bordetella bronchiseptica} Length = 144

 Score = 65.8 bits (161), Expect = 2e-14
 Identities = 30/169 (17%), Positives = 59/169 (34%), Gaps = 30/169 (17%)

Query: 6   SSNSKQRKRIAVPDAP-LKAIGFELEELTPERIIGCFRVTQNSCQPFK--VLHGGVSALI 62
           SS + +     V  +P  + +G  + E   + I+   +  +      +    HGG+ A +
Sbjct: 2   SSTALEMASRFVNRSPFNRWLGMSVLEAGEQGIVLGIKWREELISSPEIRSTHGGILATL 61

Query: 63  AESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKV 122
            ++       + +G   V  + + +++ + A  GDL RA    I+ GK       R+   
Sbjct: 62  VDAAGDYAVALKTG-HPVPTMDMHVDYHRVATPGDL-RAEGQVIHFGKRFATAHARVL-- 117

Query: 123 KEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKH 171
                 DG                    +++S     L   P+  H  H
Sbjct: 118 ----DMDGN-------------------LVASGRALYLIRAPLEHHHHH 143

>3dkz_A Thioesterase superfamily protein; Q7W9W5, borpa, PF03061, NESG, BPR208C, structural genomics, PSI-2, protein structure initiative; 2.40A {Bordetella parapertussis} Length = 142

 Score = 64.7 bits (158), Expect = 6e-14
 Identities = 13/109 (11%), Positives = 28/109 (25%), Gaps = 8/109 (7%)

Query: 23  KAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAG 82
           + +G   E               +       +HGG    + +          +    VA 
Sbjct: 17  QLLGVVPEHSGNGTARTRLPARADLVNSRGDIHGGTLMSVLDFTLGAAIRGDTPEVGVAT 76

Query: 83  VQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGR 131
           + +  + +     GDL       +  G +I   +  +          G 
Sbjct: 77  IDMNTSFMSPGR-GDL-VIETRCLRRGASIAFCEGEIR------DSAGE 117

>2pim_A Phenylacetic acid degradation-related protein; thioesterase superfamily, phenylacetic acid degradation-RELA protein; 2.20A {Ralstonia eutropha JMP134} Length = 141

 Score = 59.7 bits (145), Expect = 5e-12
 Identities = 19/119 (15%), Positives = 39/119 (32%), Gaps = 12/119 (10%)

Query: 17  VPDAP-LKAIGFELE--ELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHM 73
            P       +G  +   +L    +   +  T     P   + GG+   + + + +M    
Sbjct: 16  APVPAVAGTLGGVIRAVDLEAGSLESDYVATDAFLNPVGQVQGGMLGAMLDDVTAMLVTA 75

Query: 74  ASGFKR-VAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGR 131
                   + + L ++ L+ A+ G L R  A     G+ +      L         DG+
Sbjct: 76  TLEDGASCSTLNLNLSFLRPAQAGLL-RGRARLERRGRNVCNVVGELS-------QDGK 126

>2hbo_A Hypothetical protein (NP_422103.1); thioesterase/thiol ester dehydrase-isomerase fold, structura genomics; HET: MSE PE4; 1.85A {Caulobacter vibrioides} SCOP: d.38.1.5 Length = 158

 Score = 58.8 bits (142), Expect = 1e-11
 Identities = 19/95 (20%), Positives = 31/95 (32%), Gaps = 1/95 (1%)

Query: 26  GFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL 85
                   P +    FRV ++        HGG+    A+                  V+L
Sbjct: 33  PLFEHREGPGQARLAFRVEEHHTNGLGNCHGGMLMSFADMAWGRIIS-LQKSYSWVTVRL 91

Query: 86  TINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW 120
             + L  A+LGD V      I+    +   + R+W
Sbjct: 92  MCDFLSGAKLGDWVEGEGELISEEDMLFTVRGRIW 126

>3f1t_A Uncharacterized protein Q9I3C8_pseae; PAR319A, NESG, structural genomics, PSI-2, Pro structure initiative; HET: MSE; 2.20A {Pseudomonas aeruginosa} Length = 148

 Score = 56.0 bits (135), Expect = 1e-10
 Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 20/133 (15%)

Query: 23  KAIGFELEELTPERIIGCFRVTQNSC--QPFKVLHGGVSALIAESLASMGAHMASG-FKR 79
           + +G  +E    + +      +Q         V+HGG    + ++   +        F+ 
Sbjct: 21  QVLGLTVEAADEKGLTLRLPYSQAIIGNPESGVVHGGAITTLMDTTCGISTVCVLPDFEI 80

Query: 80  VAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGR-------- 131
              + L I+++  AE    V   A    +   +   +   +     Q D G+        
Sbjct: 81  CPTLDLRIDYMHPAEPHKDVYGFAECYRVTPNVIFTRGFAY-----QDDPGQPIAHVVGA 135

Query: 132 ----DHDADHHHH 140
                 +  HHHH
Sbjct: 136 FMRMGLEHHHHHH 148

>3hdu_A Putative thioesterase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.50A {Syntrophus aciditrophicus SB} Length = 157

 Score = 56.1 bits (135), Expect = 1e-10
 Identities = 22/125 (17%), Positives = 46/125 (36%), Gaps = 23/125 (18%)

Query: 23  KAIGFELEELTPERIIGCFRVTQNSCQ--PFKVLHGGVSALIAESLASMGAHMA------ 74
           K IG ++  ++PE++   F +          ++L+GGV +   +  A + A M       
Sbjct: 28  KIIGLKVRFISPEQVKLSFEMRDELIGNAIRRMLYGGVISSAIDMTAGLAAFMGFQEKMS 87

Query: 75  --------SGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQ 126
                   +   R++ + L + +L+   LG         +  G  + V +  L       
Sbjct: 88  GKPMEEKLAMIGRLSTMSLHVEYLRPG-LGREFVCTGYNVRTGNKVAVIRTELM------ 140

Query: 127 SDDGR 131
           +D   
Sbjct: 141 NDQDE 145

>3e8p_A Uncharacterized protein; X-RAY Q8E9M7 SOR246 NESG structure, structural genomics, PSI-2, protein structure initiative; 2.30A {Shewanella oneidensis} Length = 164

 Score = 56.1 bits (135), Expect = 1e-10
 Identities = 17/139 (12%), Positives = 49/139 (35%), Gaps = 24/139 (17%)

Query: 10  KQRKRIAVPDAP-LKAIGFELEELTPERIIGCFRVTQNSCQ--PFKVLHGGVSALIAESL 66
           K+   +     P    +G +++    + +     +          ++LHGGV+A + + +
Sbjct: 21  KRVAEVFDQHVPFHNLLGLDIKRYDIDGVEVAINMKPELIGNIHQQILHGGVTATVLDVV 80

Query: 67  ASMGAH--------------MASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTI 112
             + A               +    + +  + + +++L+    G +     + I  G  +
Sbjct: 81  GGLTAFAGLVASRDDWTIEELQQRLQTLGTIDMRVDYLRPG-RGQIFTGTGSVIRAGNRV 139

Query: 113 QVWQVRLWKVKEVQSDDGR 131
            V ++ L       ++ G 
Sbjct: 140 SVCRMELH------NEQGT 152

>1ixl_A Hypothetical protein PH1136; alpha+beta, hot-DOG-fold, structural genomics, unknown funct; 1.94A {Pyrococcus horikoshii} SCOP: d.38.1.5 Length = 131

 Score = 51.0 bits (122), Expect = 6e-09
 Identities = 15/102 (14%), Positives = 33/102 (32%), Gaps = 5/102 (4%)

Query: 19  DAPLKAIGFELEELTPERIIGCFRVTQNS-CQPFKVLHGGVSALIAESLASMGAHMASGF 77
               + +  +   +                     ++HGG +      LA   A +A   
Sbjct: 10  KLTSRILVGKPILIKEGYAEVELETIDEMKVDEKGLVHGGFTF----GLADYAAMLAVNE 65

Query: 78  KRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRL 119
             V   +  +   K  ++GD + A A  I      ++ +V++
Sbjct: 66  PTVVLGKAEVRFTKPVKVGDKLVAKAKIIEDLGKKKIVEVKV 107

>3lw3_A HP0420 homologue; hotdog-fold, structural genomics, unknown function; 1.60A {Helicobacter felis} PDB: 3lwg_A Length = 145

 Score = 41.0 bits (96), Expect = 3e-05
 Identities = 15/94 (15%), Positives = 27/94 (28%), Gaps = 5/94 (5%)

Query: 23  KAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAG 82
           + +  EL      +   C    +       V+H G     A   A    +     K    
Sbjct: 24  QNLCAELISFGSGKATVCLTPKEFMLCEDDVVHAGFIVGAASFAALCALNK----KNSLI 79

Query: 83  VQLTINHLKSAELGDLVRAVATPINL-GKTIQVW 115
             + +N L   E+   +   AT  +   K   + 
Sbjct: 80  SSMKVNLLAPIEIKQEIYFNATITHTSSKKSTIR 113

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 8e-05
 Identities = 20/122 (16%), Positives = 44/122 (36%), Gaps = 34/122 (27%)

Query: 22  LKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVA 81
           LK +    ++L P  ++        +  P ++      ++IAES+    A     +K V 
Sbjct: 308 LKYLDCRPQDL-PREVL--------TTNPRRL------SIIAESIRDGLAT-WDNWKHVN 351

Query: 82  G------VQLTINHLKSAELGDLVRAVA-----TPINLGKTIQVWQVRLWKVKEVQSDDG 130
                  ++ ++N L+ AE   +   ++       I       +  + +W   +V   D 
Sbjct: 352 CDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI----PTILLSL-IW--FDVIKSDV 404

Query: 131 RD 132
             
Sbjct: 405 MV 406

>1yoc_A Hypothetical protein PA1835; structural genomics, PSI, protein structure initiati midwest center for structural genomics, MCSG, sulfur SAD; 1.70A {Pseudomonas aeruginosa} SCOP: d.38.1.5 Length = 147

 Score = 38.8 bits (90), Expect = 2e-04
 Identities = 20/86 (23%), Positives = 29/86 (33%), Gaps = 7/86 (8%)

Query: 22  LKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGF---K 78
             +I  +  EL P      F   +        +H       AE   + G    +      
Sbjct: 29  FASIAPQFVELRPGYAEVTFPKRREVLNHIGTVHAIALCNAAE--LAAGTMTDASIPAGH 86

Query: 79  RVAGVQLTINHLKSAELGDLVRAVAT 104
           R     +T+ +L  A  GD VRAVA 
Sbjct: 87  RWIPRGMTVEYLAKAT-GD-VRAVAD 110

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	183
1sc0_A	138	Hypothetical protein HI1161; structural genomics,	100.0
3e1e_A	141	Thioesterase family protein; structural genomics,	99.97
3gek_A	146	Putative thioesterase YHDA; structure genomics, NE	99.97
1o0i_A	138	Hypothetical protein HI1161; structural genomics,	99.97
3f5o_A	148	Thioesterase superfamily member 2; hotdog fold, hy	99.97
3s4k_A	144	Putative esterase RV1847/MT1895; seattle structura	99.97
3dkz_A	142	Thioesterase superfamily protein; Q7W9W5, borpa, P	99.97
3f1t_A	148	Uncharacterized protein Q9I3C8_pseae; PAR319A, NES	99.97
3hdu_A	157	Putative thioesterase; structural genomics, joint	99.96
1vh9_A	149	P15, hypothetical protein YBDB; structural genomic	99.96
1vh5_A	148	Hypothetical protein YDII; PSI, protein structure	99.96
4i82_A	137	Putative uncharacterized protein; PAAI/YDII-like,	99.96
3e29_A	144	Uncharacterized protein Q7WE92_borbr; Q7WE92 NESG,	99.96
3lbe_A	163	Putative uncharacterized protein SMU.793; hypothet	99.96
1q4t_A	151	Thioesterase; hot-DOG, hydrolase; HET: 4CO; 1.60A	99.96
3e8p_A	164	Uncharacterized protein; X-RAY Q8E9M7 SOR246 NESG	99.96
3nwz_A	176	BH2602 protein; structural genomics, PSI-biology,	99.95
1yoc_A	147	Hypothetical protein PA1835; structural genomics,	99.95
2h4u_A	145	Thioesterase superfamily member 2; structural geno	99.95
2pim_A	141	Phenylacetic acid degradation-related protein; thi	99.94
2fs2_A	151	Phenylacetic acid degradation protein PAAI; operon	99.94
2hbo_A	158	Hypothetical protein (NP_422103.1); thioesterase/t	99.94
1sh8_A	154	Hypothetical protein PA5026; structural genomics,	99.94
1zki_A	133	Hypothetical protein PA5202; structural genomics,	99.94
2qwz_A	159	Phenylacetic acid degradation-related protein; put	99.93
1wlu_A	136	PAAI protein, phenylacetic acid degradation protei	99.92
1t82_A	155	Hypothetical acetyltransferase; structural genomic	99.92
4ae8_A	211	Thioesterase superfamily member 4; hydrolase, hotd	99.92
4ae7_A	220	Thioesterase superfamily member 5; hydrolase, hotd	99.91
1ixl_A	131	Hypothetical protein PH1136; alpha+beta, hot-DOG-f	99.91
3lw3_A	145	HP0420 homologue; hotdog-fold, structural genomics	99.9
2ov9_A	216	Hypothetical protein; rhodococcus SP. RHA1, RHA085	99.89
2prx_A	160	Thioesterase superfamily protein; ZP_00837258.1, s	99.86
3bnv_A	152	CJ0977; virulence factor, hot-DOG fold, flagel unk	99.86
2qq2_A	193	Cytosolic acyl coenzyme A thioester hydrolase; ACO	99.85
3d6l_A	137	Putative hydrolase; hot DOG fold, thioesterase, ac	99.81
3lmb_A	165	Uncharacterized protein; protein OLEI01261, unknow	99.79
4ien_A	163	Putative acyl-COA hydrolase; hot DOG fold; HET: CO	99.78
2f41_A	121	Transcription factor FAPR; 'HOT-DOG' fold, gene re	99.77
2q2b_A	179	Cytosolic acyl coenzyme A thioester hydrolase; ACO	99.76
3bjk_A	153	Acyl-COA thioester hydrolase HI0827; hotdog fold,	99.75
2f3x_A	157	Transcription factor FAPR; 'HOT-DOG' fold / malony	99.75
1y7u_A	174	Acyl-COA hydrolase; structural genomics, coenzyme	99.73
4a0z_A	190	Transcription factor FAPR; lipid homeostasis; HET:	99.73
2eis_A	133	Hypothetical protein TTHB207; COA binding motif, N	99.73
3b7k_A	333	Acyl-coenzyme A thioesterase 12; hotdog fold, stru	99.72
1vpm_A	169	Acyl-COA hydrolase; NP_241664.1, structural genomi	99.69
2v1o_A	151	Cytosolic acyl coenzyme A thioester hydrolase; acy	99.69
2cwz_A	141	Thioesterase family protein; structural genomics,	99.68
2gvh_A	288	AGR_L_2016P; 15159470, acyl-COA hydrolase, structu	99.67
2gvh_A	288	AGR_L_2016P; 15159470, acyl-COA hydrolase, structu	99.66
3b7k_A	333	Acyl-coenzyme A thioesterase 12; hotdog fold, stru	99.6
3bbj_A	272	Putative thioesterase II; structural genomics, joi	99.54
1njk_A	156	Hypothetical protein YBAW; structural genomics, th	99.53
2cye_A	133	TTHA1846, putative thioesterase; structural genomi	99.52
2fuj_A	137	Conserved hypothetical protein; structural genomic	99.44
2q78_A	153	Uncharacterized protein; structural genomics, join	99.43
3kuv_A	139	Fluoroacetyl coenzyme A thioesterase; fluoroacetyl	99.38
3ck1_A	150	Putative thioesterase; structural genomics, joint	99.38
2egj_A	128	Hypothetical protein AQ_1494; structural genomics;	99.38
2oiw_A	136	Putative 4-hydroxybenzoyl-COA thioesterase; struct	99.38
1s5u_A	138	Protein YBGC; structural genomics, hypothetical pr	99.38
2hlj_A	157	Hypothetical protein; putative thioesterase, struc	99.32
1z54_A	132	Probable thioesterase; hypothetical protein, struc	99.32
2o5u_A	148	Thioesterase; putative thioesterese,, hydrolase; 1	99.3
2pzh_A	135	Hypothetical protein HP_0496; lipid, acyl-COA, bac	99.29
2gf6_A	135	Conserved hypothetical protein; putative thioester	99.28
2ali_A	158	Hypothetical protein PA2801; structural genomics,	99.28
1lo7_A	141	4-hydroxybenzoyl-COA thioesterase; hot DOG fold, c	99.24
2nuj_A	163	Thioesterase superfamily; YP_509914.1, structural	99.24
2w3x_A	147	CALE7; hydrolase, hotdog fold, thioesterase, enedi	99.22
2oaf_A	151	Thioesterase superfamily; YP_508616.1, structural	99.2
2xem_A	150	DYNE7, TEBC; biosynthetic protein, polyketide bios	99.16
2hx5_A	152	Hypothetical protein; thioesterase/thiol ester deh	99.16
3r87_A	135	Putative uncharacterized protein; unknown function	99.14
3qoo_A	138	Uncharacterized protein; structural genomics, PSI-	99.07
4i4j_A	159	ACP-polyene thioesterase; structural genomics, PSI	99.02
3cjy_A	259	Putative thioesterase; YP_496845.1, structural gen	98.98
1iq6_A	134	(R)-hydratase, (R)-specific enoyl-COA hydratase; p	98.95
3hm0_A	167	Probable thioesterase; niaid, ssgcid, decode, UW,	98.89
3rqb_A	275	Uncharacterized protein; structural genomics, PSI-	98.89
1q6w_A	161	Monoamine oxidase regulatory protein, putative; st	98.74
2b3n_A	159	Hypothetical protein AF1124; structural genomics,	98.54
2own_A	262	Putative oleoyl-[acyl-carrier protein] thioestera;	98.53
2ess_A	248	Acyl-ACP thioesterase; NP_810988.1, structural gen	98.48
1c8u_A	285	Acyl-COA thioesterase II; internal repeats, hydrol	98.38
1tbu_A	118	Peroxisomal acyl-coenzyme A thioester hydrolase 1;	98.33
1u1z_A	168	(3R)-hydroxymyristoyl-[acyl carrier protein] dehyd	98.31
3u0a_A	285	Acyl-COA thioesterase II TESB2; structural genomic	98.3
3ir3_A	148	HTD2, 3-hydroxyacyl-thioester dehydratase 2; struc	98.28
4gak_A	250	Acyl-ACP thioesterase; MCSG, PSI-biology, structur	98.26
3exz_A	154	MAOC-like dehydratase; Q2RSA1_rhort, NESG, RRR103A	98.26
3rd7_A	286	Acyl-COA thioesterase; seattle structur genomics c	98.26
3d6x_A	146	(3R)-hydroxymyristoyl-[acyl-carrier-protein] DEHY;	98.19
2own_A	262	Putative oleoyl-[acyl-carrier protein] thioestera;	98.13
1z6b_A	154	Pffabz, fatty acid synthesis protein; malaria, bet	98.12
4i83_A	152	3-hydroxyacyl-[acyl-carrier-protein] dehydratase;	98.08
4ffu_A	176	Oxidase; structural genomics, protein structure in	97.99
2gll_A	171	FABZ, (3R)-hydroxymyristoyl-acyl carrier protein d	97.95
2c2i_A	151	RV0130; hotdog, hydratase, lyase, structural prote	97.8
4h4g_A	160	(3R)-hydroxymyristoyl-[acyl-carrier-protein] DEHY;	97.75
3k67_A	159	Putative dehydratase AF1124; hypothetical protein	97.66
3rqb_A	275	Uncharacterized protein; structural genomics, PSI-	97.43
4e3e_A	352	MAOC domain protein dehydratase; structural genomi	97.42
2bi0_A	337	Hypothetical protein RV0216; conserved hypothetica	97.12
2ess_A	248	Acyl-ACP thioesterase; NP_810988.1, structural gen	97.03
3q62_A	175	3-hydroxydecanoyl-[acyl-carrier-protein] dehydrat;	96.93
1s9c_A	298	Peroxisomal multifunctional enzyme type 2; hot-DOG	96.88
2cf2_C	342	Fatty acid synthase, DH domain; transferase, fatty	96.88
3cjy_A	259	Putative thioesterase; YP_496845.1, structural gen	96.82
3u0a_A	285	Acyl-COA thioesterase II TESB2; structural genomic	96.8
3khp_A	311	MAOC family protein; dehydrogenase, oxidoreductase	96.8
1c8u_A	285	Acyl-COA thioesterase II; internal repeats, hydrol	96.53
4b0b_A	171	3-hydroxydecanoyl-[acyl-carrier-protein] dehydrat;	96.5
3rd7_A	286	Acyl-COA thioesterase; seattle structur genomics c	96.39
3kh8_A	332	MAOC-like dehydratase; hot DOG domain, lyase; 2.00	96.37
3esi_A	129	Uncharacterized protein; protein from erwinia caro	95.91
1pn2_A	280	Peroxisomal hydratase-dehydrogenase-epimerase; hot	95.85
4gak_A	250	Acyl-ACP thioesterase; MCSG, PSI-biology, structur	95.72
2cf2_C	342	Fatty acid synthase, DH domain; transferase, fatty	94.75
2bi0_A	337	Hypothetical protein RV0216; conserved hypothetica	94.61
3bbj_A	272	Putative thioesterase II; structural genomics, joi	94.19
1pn2_A	280	Peroxisomal hydratase-dehydrogenase-epimerase; hot	93.79
4e3e_A	352	MAOC domain protein dehydratase; structural genomi	93.73
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	93.07
3khp_A	311	MAOC family protein; dehydrogenase, oxidoreductase	92.98
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	90.47
1s9c_A	298	Peroxisomal multifunctional enzyme type 2; hot-DOG	89.71
3kh8_A	332	MAOC-like dehydratase; hot DOG domain, lyase; 2.00	89.56
4b8u_A	171	3-hydroxydecanoyl-[acyl-carrier-protein] dehydrat;	86.9
2uv8_G	2051	Fatty acid synthase subunit beta (FAS1); fatty aci	81.9

>1sc0_A Hypothetical protein HI1161; structural genomics, unknown function, PSI-2, protein structure initiative; 1.70A {Haemophilus influenzae} SCOP: d.38.1.5 PDB: 2b6e_A 3lz7_A

Probab=100.00  E-value=2.9e-32  Score=212.04  Aligned_cols=129  Identities=32%  Similarity=0.555  Sum_probs=117.1

Q ss_pred             chhhccccCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCC-ceeEEEEEe
Q 030085            8 NSKQRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGF-KRVAGVQLT   86 (183)
Q Consensus         8 ~~~~~~~~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~-~~~vTv~l~   86 (183)
                      ...+.|.+ ..++|.++||++++++++|+++++||++++|+||+|.+|||++++|+|.++++|+....+. ..++|++++
T Consensus         8 ~le~ln~~-~~~~~~~~LGi~~~~~~~g~~~~~~~v~~~~~n~~G~~HGG~~~~l~D~a~~~a~~~~~~~~~~~vt~~l~   86 (138)
T 1sc0_A            8 TLENLNQL-CSNSAVSHLGIEISAFGEDWIEATMPVDHRTMQPFGVLHGGVSVALAETIGSLAGSLCLEEGKTVVGLDIN   86 (138)
T ss_dssp             CHHHHHHH-TCSSHHHHTTCEEEEECSSCEEEEEECSTTTBCTTSSBCHHHHHHHHHHHHHHHHHHTSCTTCEEEEEEEE
T ss_pred             CHHHHHhh-CcccHHHhcCCEEEEEeCCEEEEEEEcCHHHcCCCCcCcHHHHHHHHHHHHHHHHHHhCCCCceeeeeEEE
Confidence            34455554 4578999999999999999999999999999999999999999999999999998877654 678999999


Q ss_pred             EEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecC
Q 030085           87 INHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLP  164 (183)
Q Consensus        87 i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p  164 (183)
                      +|||||++.| .++++|+++|.|||+++++++|+|                         ++|++||++++|+++ +|
T Consensus        87 i~flrpa~~g-~l~a~a~v~~~Gr~~~~~~~~i~d-------------------------~~g~lvA~a~~T~~i-l~  137 (138)
T 1sc0_A           87 ANHLRPVRSG-KVTARATPINLGRNIQVWQIDIRT-------------------------EENKLCCVSRLTLSV-IN  137 (138)
T ss_dssp             EEECSCCCSS-EEEEEEEEEEECSSEEEEEEEEEC-------------------------TTSCEEEEEEEEEEE-EC
T ss_pred             EEEEccCCCC-cEEEEEEEEEcCCCEEEEEEEEEc-------------------------CCCCEEEEEEEEEEE-Ee
Confidence            9999999988 799999999999999999999998                         779999999999994 44

>3e1e_A Thioesterase family protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Silicibacter pomeroyi}

Probab=99.97  E-value=7.4e-31  Score=200.81  Aligned_cols=137  Identities=20%  Similarity=0.294  Sum_probs=122.5

Q ss_pred             CCCCCCchhhccccCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC-Ccee
Q 030085            2 EHSSSSNSKQRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG-FKRV   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~-~~~~   80 (183)
                      ++.||++....+.+...+||.++||+++++++++++++++++.+.++|+.|++|||++++|+|.++++++....+ +..+
T Consensus         1 ~~~~pe~~~~l~~~~~~~p~~~~lg~~~~~~~~g~~~~~~~~~~~~~n~~G~~hGG~l~~l~D~a~~~a~~~~~~~~~~~   80 (141)
T 3e1e_A            1 EPRFAGYAQKVRDSFARQPVMATLGARIDTLLPGRVELCMPYDRALTQQHGFLHAGIVSTVLDSACGYAAFSLMEEEAAV   80 (141)
T ss_dssp             -----CHHHHHHHHHHTCHHHHHHTCEEEEEETTEEEEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHTTSCTTEEE
T ss_pred             CCCChHHHHHHHHHhccChHHHhcCcEEEEEeCCEEEEEEEcCHHHcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcE
Confidence            467899999999998899999999999999999999999999999999999999999999999999999887654 4689


Q ss_pred             EEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085           81 AGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus        81 vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      +|++++|+|++|++ |+.|+++|++++.||++++++++++.++   +                   ++|+++|++++||+
T Consensus        81 vt~~l~v~fl~p~~-g~~l~~~a~v~~~gr~~~~~~~~v~~~~---~-------------------~~g~lva~a~~t~~  137 (141)
T 3e1e_A           81 LTVEFKVNFLNPAE-GERFAFRAEVVKPGRTLTVATATAYAFR---D-------------------GEERAIATMTATLM  137 (141)
T ss_dssp             EEEEEEEEECSCCC-SSEEEEEEEEEECCSSEEEEEEEEEEES---S-------------------SCEEEEEEEEEEEE
T ss_pred             EEEEEEEEEEccCC-CCEEEEEEEEEEcCCCEEEEEEEEEEcc---C-------------------CCCcEEEEEEEEEE
Confidence            99999999999999 8899999999999999999999999310   0                   67999999999999


Q ss_pred             E
Q 030085          161 C  161 (183)
Q Consensus       161 ~  161 (183)
                      +
T Consensus       138 ~  138 (141)
T 3e1e_A          138 A  138 (141)
T ss_dssp             E
T ss_pred             E
Confidence            5

>3gek_A Putative thioesterase YHDA; structure genomics, NESG, KR113, Q9CHK5_lacla, lactococcus L YHDA, structural genomics, PSI-2; 2.24A {Lactococcus lactis subsp}

Probab=99.97  E-value=1.9e-30  Score=204.36  Aligned_cols=121  Identities=21%  Similarity=0.296  Sum_probs=110.7

Q ss_pred             chhhhcCCEEEEEeC-----------CEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC-CceeEEEEEeE
Q 030085           20 APLKAIGFELEELTP-----------ERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG-FKRVAGVQLTI   87 (183)
Q Consensus        20 p~~~~Lg~~~~~~~~-----------g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~-~~~~vTv~l~i   87 (183)
                      +|.+.|||+++++++           |+++++|++++.++||.|++|||++++|+|.++++|+....+ +..++|++++|
T Consensus         2 ~~~~~lgi~~~~~~~d~~~~~~~~~~g~~~~~l~v~~~~~N~~G~vHGG~l~tLaD~a~g~a~~~~~~~~~~~vT~~l~i   81 (146)
T 3gek_A            2 NMIDQLNITDFQVFTDENSDKFVSKIYKFSSKMILSDFHAQPQGFLNGGASLALAEITAGMASNAIGSGQYFAFGQSINA   81 (146)
T ss_dssp             CHHHHTCEEEEEEEECSGGGGSSSCCEEEEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHHHHTTSCEEEEEEEEE
T ss_pred             ChHHhCCCEEEEEecccccccccccCCEEEEEEECCHHHcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEEEE
Confidence            789999999999999           899999999999999999999999999999999999987754 46899999999


Q ss_pred             EEecCCC-CCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCC
Q 030085           88 NHLKSAE-LGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVP  166 (183)
Q Consensus        88 ~flrpa~-~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p  166 (183)
                      |||||++ .| .|+++|++++.||++++++++|++                         ++|++||++++||++ +|++
T Consensus        82 ~flrpa~~~g-~l~a~a~v~~~Gr~~~~~~v~i~d-------------------------~~g~lvA~a~~t~~i-~~~~  134 (146)
T 3gek_A           82 NHLNPKKCEG-FVNARGLLLKNGKRNHVWEIKITD-------------------------ENETLISQITVVNAL-VPQK  134 (146)
T ss_dssp             EECSCCBSSS-EEEEEEEEEEECSSEEEEEEEEEE-------------------------TTCCEEEEEEEEEEE-EC--
T ss_pred             EEcccCCCCc-EEEEEEEEEECCCcEEEEEEEEEe-------------------------CCCCEEEEEEEEEEE-eCcc
Confidence            9999999 56 899999999999999999999998                         779999999999995 5554


Q ss_pred             C
Q 030085          167 D  167 (183)
Q Consensus       167 ~  167 (183)
                      .
T Consensus       135 ~  135 (146)
T 3gek_A          135 N  135 (146)
T ss_dssp             -
T ss_pred             h
Confidence            3

>1o0i_A Hypothetical protein HI1161; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.70A {Haemophilus influenzae} PDB: 1sc0_A 2b6e_A 3lz7_A

Probab=99.97  E-value=1.3e-29  Score=193.83  Aligned_cols=134  Identities=31%  Similarity=0.525  Sum_probs=119.3

Q ss_pred             CCCCCCCchhhccccCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC-Cce
Q 030085            1 MEHSSSSNSKQRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG-FKR   79 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~-~~~   79 (183)
                      |+-..+....+.+.+ ..+||.++||++++++++|++++++++.+.++|+.|++|||++++|+|.++++++....+ +..
T Consensus         1 ~~~~~~~~~~~~~~~-~~~p~~~~lg~~~~~~~~g~~~~~~~~~~~~~n~~G~~hGG~l~~l~D~a~~~a~~~~~~~~~~   79 (138)
T 1o0i_A            1 MLWKKTFTLENLNQL-CSNSAVSHLGIEISAFGEDWIEATMPVDHRTMQPFGVLHGGVSVALAETIGSLAGSLCLEEGKT   79 (138)
T ss_dssp             -CCSSCCCHHHHHHH-TSSSHHHHTTCEEEEECSSCEEEEEECSTTTBCTTSSBCHHHHHHHHHHHHHHHHHHTSCTTEE
T ss_pred             CCCchhcCHHHHhhh-cCchHHHHcCeEEEEEeCCEEEEEEECCHHHcCCCCccHHHHHHHHHHHHHHHHHhhhcCCCce
Confidence            443333334456655 688999999999999999999999999999999999999999999999999999887653 468


Q ss_pred             eEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEE
Q 030085           80 VAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTL  159 (183)
Q Consensus        80 ~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~  159 (183)
                      ++|++++|+|+||++.| .|+++|++++.||+++++++++++                         ++|++||++++||
T Consensus        80 ~vt~~l~i~fl~p~~~g-~l~~~a~v~~~gr~~~~~~~~i~~-------------------------~~g~lvA~a~~t~  133 (138)
T 1o0i_A           80 VVGLDINANHLRPVRSG-KVTARATPINLGRNIQVWQIDIRT-------------------------EENKLCCVSRLTL  133 (138)
T ss_dssp             EEEEEEEEEECSCCCSS-EEEEEEEEEEECSSEEEEEEEEEC-------------------------TTSCEEEEEEEEE
T ss_pred             EEEEEEEEEEEccCCCc-EEEEEEEEEECCCcEEEEEEEEEe-------------------------CCCcEEEEEEEEE
Confidence            99999999999999999 999999999999999999999998                         6799999999999


Q ss_pred             EE
Q 030085          160 LC  161 (183)
Q Consensus       160 ~~  161 (183)
                      ++
T Consensus       134 ~i  135 (138)
T 1o0i_A          134 SV  135 (138)
T ss_dssp             EE
T ss_pred             EE
Confidence            95

>3f5o_A Thioesterase superfamily member 2; hotdog fold, hydrolase; HET: UOC COA P6G; 1.70A {Homo sapiens} SCOP: d.38.1.5 PDB: 2f0x_A* 2cy9_A

Probab=99.97  E-value=1.4e-29  Score=195.06  Aligned_cols=134  Identities=20%  Similarity=0.297  Sum_probs=116.1

Q ss_pred             cccCCCCchhhhcC-CEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEec
Q 030085           13 KRIAVPDAPLKAIG-FELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLK   91 (183)
Q Consensus        13 ~~~~~~~p~~~~Lg-~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flr   91 (183)
                      ..+....||.++|| ++++++++|++++++++.+.++|+.|++|||++++|+|.++++++.....+..++|++++|+|++
T Consensus        13 ~~~~~~~pf~~~lg~~~~~~~~~g~~~~~~~~~~~~~n~~G~vhGG~l~~l~D~a~~~a~~~~~~~~~~vt~~l~i~fl~   92 (148)
T 3f5o_A           13 KAMTKARNFERVLGKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMS   92 (148)
T ss_dssp             HHHTTSSSGGGGGTTCEEEEEETTEEEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHTSSSCCCCEEEEEEEEECS
T ss_pred             HhhhCCcCHHHHhCCeEEEEecCCEEEEEEEcCHHHcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEEeC
Confidence            44677889999999 99999999999999999999999999999999999999999988875444567899999999999


Q ss_pred             CCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCCCccch
Q 030085           92 SAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKH  171 (183)
Q Consensus        92 pa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p~~~~~  171 (183)
                      |++.|+.|+++|++++.||++++++++++++                        ++|++||++++||+ ..|.++..++
T Consensus        93 p~~~G~~l~~~a~v~~~g~~~~~~~~~i~~~------------------------~~g~lva~a~~t~~-~~~~~~~~~~  147 (148)
T 3f5o_A           93 PAKLGEDIVITAHVLKQGKTLAFTSVDLTNK------------------------ATGKLIAQGRHTKH-LGNLEHHHHH  147 (148)
T ss_dssp             CCBTTCEEEEEEEEEEECSSEEEEEEEEEET------------------------TTCCEEEEEEEEEE-CC--------
T ss_pred             CCCCCCEEEEEEEEEEcCCeEEEEEEEEEEC------------------------CCCeEEEEEEEEEE-ccCccccccc
Confidence            9999999999999999999999999999981                        37999999999999 4566555443

>3s4k_A Putative esterase RV1847/MT1895; seattle structural genomics center for infectious disease, S hydrolase; 1.70A {Mycobacterium tuberculosis} SCOP: d.38.1.0

Probab=99.97  E-value=1.4e-29  Score=195.84  Aligned_cols=126  Identities=27%  Similarity=0.372  Sum_probs=113.4

Q ss_pred             ccCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC----CceeEEEEEeEEE
Q 030085           14 RIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG----FKRVAGVQLTINH   89 (183)
Q Consensus        14 ~~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~----~~~~vTv~l~i~f   89 (183)
                      .....+||.++||++++++++++++++|++.++++|+.|++|||++++|+|.++++++....+    +..++|++++|+|
T Consensus        14 ~~~~~~p~~~~lG~~~~~~~~g~~~~~~~~~~~~~n~~G~vHGG~l~tl~D~a~~~a~~~~~~~~~~~~~~vt~~l~i~f   93 (144)
T 3s4k_A           14 PLNVTVPFDSELGLQFTELGPDGARAQLDVRPKLLQLTGVVHGGVYCAMIESIASMAAFAWLNSHGEGGSVVGVNNNTDF   93 (144)
T ss_dssp             -----CHHHHHHTCEEEEEETTEEEEEEEECGGGBCTTSSBCHHHHHHHHHHHHHHHHHHHHTC--CCCEEEEEEEEEEE
T ss_pred             ccccCChHHHHCCcEEEEEcCCEEEEEEECCHHHcCCCCcChHHHHHHHHHHHHHHHHHhhcccccCCceeEEEEEEEEE
Confidence            456778999999999999999999999999999999999999999999999999999876543    4679999999999


Q ss_pred             ecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCC
Q 030085           90 LKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVP  166 (183)
Q Consensus        90 lrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p  166 (183)
                      +||++.| .|+++|++++.||++++++++|++                         ++|++||++++||+ .++++
T Consensus        94 l~p~~~g-~l~~~a~v~~~gr~~~~~~~~i~~-------------------------~~g~lvA~a~~t~~-~~~~~  143 (144)
T 3s4k_A           94 VRSISSG-MVYGTAEPLHRGRRQQLWLVTITD-------------------------DTDRVVARGQVRLQ-NLEAR  143 (144)
T ss_dssp             CCCCCSE-EEEEEEEEEEECSSEEEEEEEEEC-------------------------TTSCEEEEEEEEEE-EECCC
T ss_pred             ECCCCCC-EEEEEEEEEEcCCCEEEEEEEEEc-------------------------CCCCEEEEEEEEEE-EecCC
Confidence            9999999 999999999999999999999998                         67999999999999 46655

>3dkz_A Thioesterase superfamily protein; Q7W9W5, borpa, PF03061, NESG, BPR208C, structural genomics, PSI-2, protein structure initiative; 2.40A {Bordetella parapertussis}

Probab=99.97  E-value=5e-29  Score=192.05  Aligned_cols=128  Identities=11%  Similarity=0.114  Sum_probs=116.4

Q ss_pred             hccccCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEe
Q 030085           11 QRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHL   90 (183)
Q Consensus        11 ~~~~~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~fl   90 (183)
                      +.+.+....||.++||++++++++|++++++++.+.++|+.|++|||++++|+|.++++++....++..++|++++|+|+
T Consensus         5 ~~~~~~~~~p~~~~lg~~~~~~~~g~~~~~~~~~~~~~n~~G~vhGG~l~~l~D~a~~~a~~~~~~~~~~vt~~l~i~fl   84 (142)
T 3dkz_A            5 HTDFFGLTIPFMQLLGVVPEHSGNGTARTRLPARADLVNSRGDIHGGTLMSVLDFTLGAAIRGDTPEVGVATIDMNTSFM   84 (142)
T ss_dssp             -CBCSSSBCHHHHHHTCEEEEEETTEEEEEECCCSTTBCSSSSBCHHHHHHHHHHHHHHTTTTSCTTSCEEEEEEEEEEC
T ss_pred             hhhhhccCccHHHHcCCEEEEecCCEEEEEEECCHHHcCCCCcCHHHHHHHHHHHHHHHHHHhhCCCCceEEEEEEEEEe
Confidence            55667888999999999999999999999999999999999999999999999999998887655456799999999999


Q ss_pred             cCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCC
Q 030085           91 KSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVP  166 (183)
Q Consensus        91 rpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p  166 (183)
                      +|++ |+ |+++|++++.||++++++++|++                         ++|+++|.+++||++ ++++
T Consensus        85 ~p~~-g~-l~~~a~v~~~gr~~~~~~~~v~~-------------------------~~g~lva~a~~t~~~-~~~~  132 (142)
T 3dkz_A           85 SPGR-GD-LVIETRCLRRGASIAFCEGEIRD-------------------------SAGELVAKATATFKI-IQRR  132 (142)
T ss_dssp             SCCC-SC-EEEEEEEEEECSSEEEEEEEEEE-------------------------TTCCEEEEEEEEEEE-CC--
T ss_pred             cCCC-Ce-EEEEEEEEEcCCcEEEEEEEEEe-------------------------CCCCEEEEEEEEEEE-ecCC
Confidence            9999 98 99999999999999999999998                         679999999999995 4443

>3f1t_A Uncharacterized protein Q9I3C8_pseae; PAR319A, NESG, structural genomics, PSI-2, Pro structure initiative; HET: MSE; 2.20A {Pseudomonas aeruginosa}

Probab=99.97  E-value=1.1e-29  Score=198.63  Aligned_cols=125  Identities=14%  Similarity=0.169  Sum_probs=115.8

Q ss_pred             hccccCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCc-CC-CCcccHHHHHHHHHHHHHHHHHHhcC-CceeEEEEEeE
Q 030085           11 QRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSC-QP-FKVLHGGVSALIAESLASMGAHMASG-FKRVAGVQLTI   87 (183)
Q Consensus        11 ~~~~~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~-Np-~G~lHGG~~a~LaD~A~g~a~~~~~~-~~~~vTv~l~i   87 (183)
                      ....+...+||.++||++++++++|+++++|++.+.++ || .|.+|||++++|+|.++++++....+ +..++|++++|
T Consensus         9 ~~~~~~~~~p~~~~lG~~~~~~~~g~~~~~~~~~~~~~nnp~~G~vHGG~latl~D~a~g~a~~~~~~~~~~~vT~~l~v   88 (148)
T 3f1t_A            9 RARRFLSALRHCQVLGLTVEAADEKGLTLRLPYSQAIIGNPESGVVHGGAITTLMDTTCGISTVCVLPDFEICPTLDLRI   88 (148)
T ss_dssp             HHHHHHTTCSHHHHHTCEEEEECSSCEEEEECGGGGBCSCSSSCCBCHHHHHHHHHHHHHHHGGGTCSSCCCCCEEEEEE
T ss_pred             HHHHHhcCCcHHHhcCcEEEEEeCCEEEEEEEcCHHHcCCCCCCcCcHHHHHHHHHHHHHHHHHHhCCCCCceEEEEEEE
Confidence            34556788999999999999999999999999999999 56 89999999999999999999887654 46799999999


Q ss_pred             EEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCC-CCcEEEEEEEEEE
Q 030085           88 NHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSS-SSIMISSSTVTLL  160 (183)
Q Consensus        88 ~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~lvA~~t~T~~  160 (183)
                      +|+||++.|+.|+++|++++.||++++++++|++                         + +|++||.+++||+
T Consensus        89 ~flrp~~~G~~l~a~a~v~~~gr~~~~~~~~i~~-------------------------~~~g~lvA~a~~t~~  137 (148)
T 3f1t_A           89 DYMHPAEPHKDVYGFAECYRVTPNVIFTRGFAYQ-------------------------DDPGQPIAHVVGAFM  137 (148)
T ss_dssp             EECSCCCTTSCEEEEEEEEEECSSEEEEEEEEES-------------------------SCTTSCSEEEEEEEE
T ss_pred             EEecCCCCCCEEEEEEEEEeccCcEEEEEEEEEE-------------------------CCCCcEEEEEEEEEE
Confidence            9999999998999999999999999999999998                         4 4999999999999

>3hdu_A Putative thioesterase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.50A {Syntrophus aciditrophicus SB}

Probab=99.96  E-value=4.4e-30  Score=201.57  Aligned_cols=127  Identities=18%  Similarity=0.252  Sum_probs=114.3

Q ss_pred             hhhcccc-CCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCc-CC-CCcccHHHHHHHHHHHHHHHHHHhcCC--------
Q 030085            9 SKQRKRI-AVPDAPLKAIGFELEELTPERIIGCFRVTQNSC-QP-FKVLHGGVSALIAESLASMGAHMASGF--------   77 (183)
Q Consensus         9 ~~~~~~~-~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~-Np-~G~lHGG~~a~LaD~A~g~a~~~~~~~--------   77 (183)
                      ....+.+ ...+||.++||++++++++|+++++|++.++++ || .|++|||++++|+|.++++++....+.        
T Consensus        13 ~~~l~~~~~~~~p~~~~lG~~~~~~~~g~~~~~~~~~~~~~~Np~~G~~HGG~iatl~D~a~g~a~~~~~~~~~~~~~~~   92 (157)
T 3hdu_A           13 FSAVNEIFEEKIPFNKIIGLKVRFISPEQVKLSFEMRDELIGNAIRRMLYGGVISSAIDMTAGLAAFMGFQEKMSGKPME   92 (157)
T ss_dssp             HHHHHHHHHTSCGGGGTEEEEEEEECSSEEEEEEEESSCCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCHH
T ss_pred             HHHHHHHhhcCCcHHHhcCCEEEEecCCEEEEEEECCHHHhCCCCCCeEcHHHHHHHHHHHHHHHHHhhCcccccccccc
Confidence            3444444 458999999999999999999999999999998 77 999999999999999999998876432        


Q ss_pred             ------ceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcE
Q 030085           78 ------KRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIM  151 (183)
Q Consensus        78 ------~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l  151 (183)
                            ..++|++++|+|+||++ |+.|+++|+++|.||++++++++|++                         ++|++
T Consensus        93 ~~~~~~~~~vT~~l~i~ylrp~~-g~~l~a~a~v~~~gr~~~~~~~~i~~-------------------------~~g~l  146 (157)
T 3hdu_A           93 EKLAMIGRLSTMSLHVEYLRPGL-GREFVCTGYNVRTGNKVAVIRTELMN-------------------------DQDEL  146 (157)
T ss_dssp             HHHHHGGGEEEEEEEEEESSCCC-CSEEEEEEEEEEECSSEEEEEEEEEE-------------------------TTCCE
T ss_pred             ccccccCceEEEEEEEEEECCCC-CCeEEEEEEEEEcCCeEEEEEEEEEe-------------------------CCCcE
Confidence                  14899999999999999 88999999999999999999999998                         67999


Q ss_pred             EEEEEEEEEE
Q 030085          152 ISSSTVTLLC  161 (183)
Q Consensus       152 vA~~t~T~~~  161 (183)
                      ||++++||++
T Consensus       147 vA~a~~t~~v  156 (157)
T 3hdu_A          147 IAVGSVSYIL  156 (157)
T ss_dssp             EEEEEEEEEE
T ss_pred             EEEEEEEEEE
Confidence            9999999995

>1vh9_A P15, hypothetical protein YBDB; structural genomics, unknown function; 2.15A {Escherichia coli} SCOP: d.38.1.5

Probab=99.96  E-value=1.5e-28  Score=191.28  Aligned_cols=134  Identities=24%  Similarity=0.374  Sum_probs=117.0

Q ss_pred             chhhccccCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC-CceeEEEEEe
Q 030085            8 NSKQRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG-FKRVAGVQLT   86 (183)
Q Consensus         8 ~~~~~~~~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~-~~~~vTv~l~   86 (183)
                      ...+.+.+ ..+||.+.||+++++++++++++++++.++++|+.|++|||++++|+|.++++++....+ +..++|++++
T Consensus        10 ~l~~~~~~-~~~p~~~~lg~~~~~~~~g~~~~~~~v~~~~~n~~G~vhGG~l~~l~D~a~~~a~~~~~~~~~~~vt~~l~   88 (149)
T 1vh9_A           10 TLDELNAT-SDNTMVAHLGIVYTRLGDDVLEAEMPVDTRTHQPFGLLHGGASAALAETLGSMAGFMMTRDGQCVVGTELN   88 (149)
T ss_dssp             CHHHHHHT-STTSHHHHTTCEEEEECSSCEEEEEECSTTTBCTTSSBCHHHHHHHHHHHHHHHHHTTCCTTCCEEEEEEE
T ss_pred             cHHHHHhh-hhchHHHhcCcEEEEecCCEEEEEEECCHHHcCCCCcChHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEEE
Confidence            34444554 478999999999999999999999999999999999999999999999999999876554 4679999999


Q ss_pred             EEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCC
Q 030085           87 INHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVP  166 (183)
Q Consensus        87 i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p  166 (183)
                      |+|++|++.| .|+++|++++.||+++++++++++                         ++|++||++++||++..++|
T Consensus        89 i~fl~p~~~G-~l~a~a~v~~~gr~~~~~~~~v~~-------------------------~~g~lvA~a~~t~~~~~~~~  142 (149)
T 1vh9_A           89 ATHHRPVSEG-KVRGVCQPLHLGRQNQSWEIVVFD-------------------------EQGRRCCTCRLGTAVLGEGG  142 (149)
T ss_dssp             EEECSCCCSS-EEEEEEEEEEECSSEEEEEEEEEC-------------------------TTSCEEEEEEEEEEECC---
T ss_pred             EEEEcCCCCc-EEEEEEEEEECCCCEEEEEEEEEe-------------------------CCCCEEEEEEEEEEEecCCC
Confidence            9999999999 999999999999999999999998                         67999999999999654444


Q ss_pred             Cc
Q 030085          167 DH  168 (183)
Q Consensus       167 ~~  168 (183)
                      .+
T Consensus       143 ~~  144 (149)
T 1vh9_A          143 SH  144 (149)
T ss_dssp             --
T ss_pred             Cc
Confidence            43

>1vh5_A Hypothetical protein YDII; PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; 1.34A {Escherichia coli} SCOP: d.38.1.5 PDB: 1vi8_A 1sbk_A

Probab=99.96  E-value=4.5e-28  Score=187.86  Aligned_cols=132  Identities=26%  Similarity=0.443  Sum_probs=117.3

Q ss_pred             CchhhccccCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC-CceeEEEEE
Q 030085            7 SNSKQRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG-FKRVAGVQL   85 (183)
Q Consensus         7 ~~~~~~~~~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~-~~~~vTv~l   85 (183)
                      -...+.+.+. .+||.+.||+++++++++++++++++.+.++|+.|++|||++++|+|.++++++....+ +..++|+++
T Consensus         9 ~~~~~~~~~~-~~p~~~~lg~~~~~~~~~~~~~~~~v~~~~~n~~G~vhGG~l~~l~D~a~~~a~~~~~~~~~~~vt~~l   87 (148)
T 1vh5_A            9 ITLEALNAMG-EGNMVGFLDIRFEHIGDDTLEATMPVDSRTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGLEI   87 (148)
T ss_dssp             CCHHHHHHTT-TTSHHHHTTCEEEEECSSCEEEEEECSTTTBCTTSSBCHHHHHHHHHHHHHHHHHHTSCTTCEEEEEEE
T ss_pred             hhHHHHHHhh-cchHHHhcCcEEEEEeCCEEEEEEECCHHHcCCCCcChHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEE
Confidence            3344445544 78999999999999999999999999999999999999999999999999998876554 567999999


Q ss_pred             eEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCC
Q 030085           86 TINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPV  165 (183)
Q Consensus        86 ~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~  165 (183)
                      +|+|++|++.| .|+++|++++.||+++++++++++                         ++|++||++++||++..++
T Consensus        88 ~i~fl~p~~~G-~l~a~a~v~~~gr~~~~~~~~v~~-------------------------~~g~lvA~a~~t~~~~~~~  141 (148)
T 1vh5_A           88 NANHVRSAREG-RVRGVCKPLHLGSRHQVWQIEIFD-------------------------EKGRLCCSSRLTTAILEGG  141 (148)
T ss_dssp             EEEECSCCCSS-EEEEEEEEEEECSSEEEEEEEEEC-------------------------TTSCEEEEEEEEEEEEC--
T ss_pred             EEEEEcCCCCC-EEEEEEEEEEcCCCEEEEEEEEEe-------------------------CCCCEEEEEEEEEEEecCc
Confidence            99999999999 999999999999999999999998                         6799999999999954333

>4i82_A Putative uncharacterized protein; PAAI/YDII-like, hot DOG fold, thioesterase, hydrolase; 2.50A {Streptococcus pneumoniae}

Probab=99.96  E-value=2.2e-28  Score=186.56  Aligned_cols=125  Identities=18%  Similarity=0.190  Sum_probs=113.6

Q ss_pred             CCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCC
Q 030085           16 AVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAEL   95 (183)
Q Consensus        16 ~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~   95 (183)
                      ...+||.++||+++++++++++++++++.+.++|+.|++|||++++|+|.++++++...  +..++|++++++|++|++.
T Consensus         7 ~~~~p~~~~lg~~~~~~~~g~~~~~~~~~~~~~n~~G~vhGG~l~~l~D~a~~~a~~~~--~~~~vt~~l~i~fl~p~~~   84 (137)
T 4i82_A            7 FHFDAISAFENYEIEKMRDGHVVVTTKVVNSSLNYYGNAHGGYLFTLCDQISGLVVISL--GLDGVTLQSSINYLKAGKL   84 (137)
T ss_dssp             -CCCCCCCCSSCEEEEEETTEEEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHTT--TCEEEEEEEEEEECSCCBT
T ss_pred             cccCchHHhcCcEEEEecCCEEEEEEECCHHHcCCCCCChHHHHHHHHHHHHHHHHHhc--CCCeEEEEEEEEEecccCC
Confidence            45789999999999999999999999999999999999999999999999999888753  5679999999999999999


Q ss_pred             CCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCCCc
Q 030085           96 GDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDH  168 (183)
Q Consensus        96 Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p~~  168 (183)
                      |+.|+++|++++.||+++++++++++                         ++|+++|.+++||++ ++++..
T Consensus        85 g~~l~~~a~v~~~g~~~~~~~~~v~~-------------------------~~g~lva~a~~t~~~-~~~~~~  131 (137)
T 4i82_A           85 DDVLTIKGECVHQGRTTCVMDVDITN-------------------------QEGRNVCKATFTMFV-TGQRSE  131 (137)
T ss_dssp             TCEEEEEEEEEEECSSEEEEEEEEEC-------------------------TTSCEEEEEEEEEEE-EEC---
T ss_pred             CCEEEEEEEEEEeCCcEEEEEEEEEc-------------------------CCCcEEEEEEEEEEE-ECCCCC
Confidence            99999999999999999999999998                         679999999999995 555443

>3e29_A Uncharacterized protein Q7WE92_borbr; Q7WE92 NESG, structural genomics, PSI-2, Pro structure initiative; 2.40A {Bordetella bronchiseptica} SCOP: d.38.1.0

Probab=99.96  E-value=7.4e-29  Score=191.50  Aligned_cols=132  Identities=17%  Similarity=0.281  Sum_probs=115.7

Q ss_pred             hhhccccCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCc-CC-CCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEe
Q 030085            9 SKQRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSC-QP-FKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLT   86 (183)
Q Consensus         9 ~~~~~~~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~-Np-~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~   86 (183)
                      ....+.+...+||.++||+++++++++++++++++.++++ || .|++|||++++|+|.++++++....+ ..++|++++
T Consensus         6 l~~l~~~~~~~p~~~~lg~~~~~~~~g~~~~~~~~~~~~~~n~~~G~~hGG~l~~l~D~a~~~a~~~~~~-~~~vt~~l~   84 (144)
T 3e29_A            6 LEMASRFVNRSPFNRWLGMSVLEAGEQGIVLGIKWREELISSPEIRSTHGGILATLVDAAGDYAVALKTG-HPVPTMDMH   84 (144)
T ss_dssp             HHHHHHHHHTCHHHHHTTCEEEEESSSCEEEEECCCGGGBSCTTTTCBCHHHHHHHHHHHHHHHHHHHHS-SCCCEEEEE
T ss_pred             HHHHHHHHhCCcHHHHcCCEEEEEcCCEEEEEEEcCHHHhcCCCCCeEcHHHHHHHHHHHHHHHHHHcCC-CceEEEEEE
Confidence            3445556678999999999999999999999999999998 98 89999999999999999999877544 568899999


Q ss_pred             EEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCC
Q 030085           87 INHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVP  166 (183)
Q Consensus        87 i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p  166 (183)
                      |+|++|++.|+ |+++|++++.||++++++++|++                         ++|+++|++++||+ .++.+
T Consensus        85 i~fl~p~~~g~-l~~~a~v~~~gr~~~~~~~~i~~-------------------------~~g~~va~a~~tf~-~~~~~  137 (144)
T 3e29_A           85 VDYHRVATPGD-LRAEGQVIHFGKRFATAHARVLD-------------------------MDGNLVASGRALYL-IRAPL  137 (144)
T ss_dssp             EEECSCCCSSC-EEEEEEEEEECSSEEEEEEEEEE-------------------------TTCCEEEEEEEEEE-CC---
T ss_pred             EEEecCCCCcE-EEEEEEEEEeCCcEEEEEEEEEe-------------------------CCCCEEEEEEEEEE-EcCcc
Confidence            99999999996 99999999999999999999998                         67999999999999 44444


Q ss_pred             Cc
Q 030085          167 DH  168 (183)
Q Consensus       167 ~~  168 (183)
                      ++
T Consensus       138 ~~  139 (144)
T 3e29_A          138 EH  139 (144)
T ss_dssp             --
T ss_pred             cC
Confidence            43

>3lbe_A Putative uncharacterized protein SMU.793; hypothetical protein, unknown function; HET: COA; 1.70A {Streptococcus mutans} PDB: 3lbb_A*

Probab=99.96  E-value=3.5e-28  Score=193.53  Aligned_cols=118  Identities=19%  Similarity=0.207  Sum_probs=111.9

Q ss_pred             CCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCC
Q 030085           18 PDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGD   97 (183)
Q Consensus        18 ~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd   97 (183)
                      .+||.++||++++++++|++++++++.+.++|+.|++|||++++|+|.++++++...  +..++|++++|+|+||++.|+
T Consensus        40 ~~p~~~~lg~~i~~~~~g~~~~~~~v~~~~~N~~G~vHGG~l~tl~D~a~g~a~~~~--g~~~vT~~l~i~flrpv~~G~  117 (163)
T 3lbe_A           40 LHEIRVFENFDMVSFEKGHVIVTTEVVDKSLNYYGFAHGGYIFTLCDQISGLVSIST--GFDAVTLQSSINYLKSGKLGD  117 (163)
T ss_dssp             TTSSCCSSCCEEEEEETTEEEEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHT--TEEEEEEEEEEEECSCCCTTC
T ss_pred             CCcHHHhCCCEEEEecCCEEEEEEEcCHHHcCCCCcCHHHHHHHHHHHHHHHHHHhc--CCcEEEEEEEEEEecCCCCCC
Confidence            468999999999999999999999999999999999999999999999999998764  567999999999999999999


Q ss_pred             EEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085           98 LVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus        98 ~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      .|+++|++++.||++++++++|++                         ++|++||++++||++.
T Consensus       118 ~l~a~a~v~~~gr~~~~~~~~i~~-------------------------~~g~lvA~a~~t~~~~  157 (163)
T 3lbe_A          118 TLLIDGRCVHDGRTTKVVDVTVTN-------------------------QLKQEVAKATFTMFVT  157 (163)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEEEC-------------------------TTCCEEEEEEEEEEEE
T ss_pred             EEEEEEEEEEcCCcEEEEEEEEEe-------------------------CCCCEEEEEEEEEEEc
Confidence            999999999999999999999998                         6899999999999954

>1q4t_A Thioesterase; hot-DOG, hydrolase; HET: 4CO; 1.60A {Arthrobacter SP} SCOP: d.38.1.5 PDB: 1q4s_A* 1q4u_A* 3r37_A* 3r36_B* 3r3d_A* 3r34_A* 3r35_A* 3r3f_A* 3r32_A* 3r3a_A* 3r3b_A* 3r3c_A*

Probab=99.96  E-value=5.1e-28  Score=187.55  Aligned_cols=122  Identities=25%  Similarity=0.362  Sum_probs=113.3

Q ss_pred             CCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC--CceeEEEEEeEEEecCCCC
Q 030085           18 PDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG--FKRVAGVQLTINHLKSAEL   95 (183)
Q Consensus        18 ~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~--~~~~vTv~l~i~flrpa~~   95 (183)
                      .+||.++||+++++++++++++++++.+.++|+.|.+|||++++|+|.++++++....+  +..++|++++|+|++|++.
T Consensus        27 ~~p~~~~lg~~~~~~~~~~~~~~~~v~~~~~n~~G~vhGG~l~~l~D~a~~~a~~~~~~~~~~~~vt~~l~i~fl~p~~~  106 (151)
T 1q4t_A           27 EQTLDGTVGFVIDEMTPERATASVEVTDTLRQRWGLVHGGAYCALAEMLATEATVAVVHEKGMMAVGQSNHTSFFRPVKE  106 (151)
T ss_dssp             GGSHHHHHTCEEEEECSSEEEEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEESSCCCS
T ss_pred             chhHHHhcCcEEEEEeCCEEEEEEECCHHHcCCCCCChHHHHHHHHHHHHHHHHhhccccCCceEEEEEEEEEEECCCcC
Confidence            78999999999999999999999999999999999999999999999999998876543  4679999999999999999


Q ss_pred             CCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCC
Q 030085           96 GDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVP  166 (183)
Q Consensus        96 Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p  166 (183)
                      | .|+++|++++.||+++++++++++                         ++|++||.+++||++ ++++
T Consensus       107 G-~l~~~a~v~~~gr~~~~~~~~i~~-------------------------~~g~lva~a~~t~~~-~~~~  150 (151)
T 1q4t_A          107 G-HVRAEAVRIHAGSTTWFWDVSLRD-------------------------DAGRLCAVSSMSIAV-RPRR  150 (151)
T ss_dssp             S-EEEEEEEEEEECSSEEEEEEEEEC-------------------------TTCCEEEEEEEEEEE-EECC
T ss_pred             C-EEEEEEEEEECCCCEEEEEEEEEc-------------------------CCCCEEEEEEEEEEE-eCCC
Confidence            9 999999999999999999999998                         679999999999995 4444

>3e8p_A Uncharacterized protein; X-RAY Q8E9M7 SOR246 NESG structure, structural genomics, PSI-2, protein structure initiative; 2.30A {Shewanella oneidensis}

Probab=99.96  E-value=1.4e-28  Score=195.11  Aligned_cols=120  Identities=14%  Similarity=0.270  Sum_probs=110.3

Q ss_pred             CCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCc-CC-CCcccHHHHHHHHHHHHHHHHHHhcCC--------------ce
Q 030085           16 AVPDAPLKAIGFELEELTPERIIGCFRVTQNSC-QP-FKVLHGGVSALIAESLASMGAHMASGF--------------KR   79 (183)
Q Consensus        16 ~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~-Np-~G~lHGG~~a~LaD~A~g~a~~~~~~~--------------~~   79 (183)
                      ...+||.+.||++++++++|+++++|++.++++ || .|++|||++++|+|.++++++....+.              ..
T Consensus        28 ~~~~pf~~~lGi~~~~~~~g~~~~~~~~~~~~~~Np~~G~vHGG~iatL~D~a~g~a~~~~~~~~~~~~~~~~~~~~~~~  107 (164)
T 3e8p_A           28 DQHVPFHNLLGLDIKRYDIDGVEVAINMKPELIGNIHQQILHGGVTATVLDVVGGLTAFAGLVASRDDWTIEELQQRLQT  107 (164)
T ss_dssp             HHSCHHHHHHTCEEEEESSSCEEEEEECCGGGEEETTTTEECHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHH
T ss_pred             hcCCcHHHhcCcEEEEEeCCEEEEEEEcCHHHhCCCCCCeEeHHHHHHHHHHHHHHHHHHhccccccccccccccccccc
Confidence            347899999999999999999999999999999 65 999999999999999999998775421              25


Q ss_pred             eEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEE
Q 030085           80 VAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTL  159 (183)
Q Consensus        80 ~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~  159 (183)
                      ++|++|+|+|+||++ |+.|+++|++++.||++++++++|++                         ++|++||++++||
T Consensus       108 ~vT~~l~v~flrp~~-g~~l~a~a~v~~~Gr~~~~~~~~i~~-------------------------~~g~lvA~a~~tf  161 (164)
T 3e8p_A          108 LGTIDMRVDYLRPGR-GQIFTGTGSVIRAGNRVSVCRMELHN-------------------------EQGTHIAFGTGTY  161 (164)
T ss_dssp             CEEEEEEEEECSCCC-CSEEEEEEEEEECCSSEEEEEEEEEE-------------------------TTCCEEEEEEEEE
T ss_pred             ceEEEEEEEEecCCC-CCeEEEEEEEEEcCCcEEEEEEEEEe-------------------------CCCCEEEEEEEEE
Confidence            799999999999999 88999999999999999999999998                         7899999999999


Q ss_pred             EE
Q 030085          160 LC  161 (183)
Q Consensus       160 ~~  161 (183)
                      ++
T Consensus       162 ~v  163 (164)
T 3e8p_A          162 MV  163 (164)
T ss_dssp             EC
T ss_pred             Ee
Confidence            84

>3nwz_A BH2602 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, unknown FUN; HET: COA; 2.57A {Bacillus halodurans}

Probab=99.95  E-value=4.4e-27  Score=188.05  Aligned_cols=127  Identities=17%  Similarity=0.195  Sum_probs=111.7

Q ss_pred             CCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC-CceeEEEEEeEEEecCCCC
Q 030085           17 VPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG-FKRVAGVQLTINHLKSAEL   95 (183)
Q Consensus        17 ~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~-~~~~vTv~l~i~flrpa~~   95 (183)
                      .+++|.++||+++++++++++++++++.+.++|+.|++|||++++|+|.++++++....+ +..++|++++|+|++|++ 
T Consensus        44 ~~~~~~~~lgi~~~~~~~g~~~~~~~v~~~~~N~~G~vhGG~l~tl~D~a~~~a~~~~~~~~~~~vt~~l~i~fl~P~~-  122 (176)
T 3nwz_A           44 YATYLASLTQIESQEREDGRFEVRLPIGPLVNNPLNMVHGGITATLLDTAMGQMVNRQLPDGQSAVTSELNIHYVKPGM-  122 (176)
T ss_dssp             SSSHHHHHHTCEEEECSSSCEEEEEECCTTTBCTTSSBCHHHHHHHHHHHHHHHHHHTSCTTCCEEEEEEEEEECSCCC-
T ss_pred             CCChHHHHcCcEEEEEcCCEEEEEEECCHHHcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEEEEEEccCC-
Confidence            556777999999999999999999999999999999999999999999999999877654 467999999999999999 


Q ss_pred             CCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCCCccc
Q 030085           96 GDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHAK  170 (183)
Q Consensus        96 Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p~~~~  170 (183)
                      |+.|+++|++++.||+++++++++++                         ++|++||.+++||++ ++++++.+
T Consensus       123 g~~l~~~a~v~~~gr~~~~~~~~v~~-------------------------~~g~lvA~a~~t~~v-~~~~~~~~  171 (176)
T 3nwz_A          123 GTYLRAVASIVHQGKQRIVVEGKVYT-------------------------DQGETVAMGTGSFFV-LRSRGLEH  171 (176)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEEEC-------------------------TTSCEEEEEEEEEEE-C-------
T ss_pred             CCEEEEEEEEEEeCCCEEEEEEEEEe-------------------------CCCcEEEEEEEEEEE-eCCCcCCC
Confidence            88999999999999999999999998                         679999999999995 55554433

>1yoc_A Hypothetical protein PA1835; structural genomics, PSI, protein structure initiati midwest center for structural genomics, MCSG, sulfur SAD; 1.70A {Pseudomonas aeruginosa} SCOP: d.38.1.5

Probab=99.95  E-value=2.5e-27  Score=184.26  Aligned_cols=118  Identities=19%  Similarity=0.093  Sum_probs=109.9

Q ss_pred             CCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC-CceeEEEEEeEEEecCCC
Q 030085           16 AVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG-FKRVAGVQLTINHLKSAE   94 (183)
Q Consensus        16 ~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~-~~~~vTv~l~i~flrpa~   94 (183)
                      ....||.++||++++++++|+++++|+++++++|+.|++|||++++|+|.++++++....+ +...+|++++|+|+||++
T Consensus        23 ~~~~p~~~~lG~~i~~~~~g~~~~~~~~~~~~~N~~G~vHGG~i~tLaD~a~g~a~~~~~~~~~~~vt~~l~i~ylrp~~  102 (147)
T 1yoc_A           23 GQFAPYFASIAPQFVELRPGYAEVTFPKRREVLNHIGTVHAIALCNAAELAAGTMTDASIPAGHRWIPRGMTVEYLAKAT  102 (147)
T ss_dssp             HHHSGGGGGGCCEEEEEETTEEEEEECCCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHHSCTTEEEEEEEEEEEECSCCC
T ss_pred             hcccchHHhcCcEEEEEeCCEEEEEEcCcHHHcCCCCCCHHHHHHHHHHHHHHHHHhccCCCCCcEEEEEEEEEEeccCC
Confidence            3467999999999999999999999999999999999999999999999999999876654 467899999999999999


Q ss_pred             CCCEEEEEEEEEEeC---CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           95 LGDLVRAVATPINLG---KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        95 ~Gd~l~a~a~vi~~G---r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                       | .|+++|++++.|   |++++++++|++                         ++ ++||.+++|+++
T Consensus       103 -g-~l~a~a~v~~~g~~~r~~~~~~~~v~~-------------------------~~-~lvA~a~~t~~v  144 (147)
T 1yoc_A          103 -G-DVRAVADGSQIDWQATGNLVVPVVAYV-------------------------DD-KPVFRAEITMYV  144 (147)
T ss_dssp             -S-CEEEEEECTTSCTTCCEEEEEEEEEEE-------------------------TT-EEEEEEEEEEEE
T ss_pred             -C-cEEEEEEEcccccccceEEEEEEEEEE-------------------------CC-EEEEEEEEEEEE
Confidence             8 599999999999   999999999998                         66 999999999995

>2h4u_A Thioesterase superfamily member 2; structural genomics, structural genomics consortium, SGC, hydrolase; 2.20A {Homo sapiens} SCOP: d.38.1.5

Probab=99.95  E-value=4.1e-26  Score=176.03  Aligned_cols=130  Identities=18%  Similarity=0.243  Sum_probs=110.4

Q ss_pred             CchhhccccCCCCchhhhc-CCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEE
Q 030085            7 SNSKQRKRIAVPDAPLKAI-GFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL   85 (183)
Q Consensus         7 ~~~~~~~~~~~~~p~~~~L-g~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l   85 (183)
                      |...+...+...+||.+.| |+++++++++++++++++.+.++|+.|.+|||++++|+|.++++++....++...+|+++
T Consensus        12 ~~~~~~~~~~~~~pf~~~l~g~~~~~~~~g~~~~~~~v~~~~~n~~g~vhGG~l~~l~D~a~~~a~~~~~~~~~~vt~~l   91 (145)
T 2h4u_A           12 DLGTENLYFQSMRNFERVLGKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDM   91 (145)
T ss_dssp             ------------CCGGGGGTTCEEEEEETTEEEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHTSSSCCCCEEEEE
T ss_pred             ccccccccccCCccHHHHhCCcEEEEecCCEEEEEEEeCHHHcCCCCcChHHHHHHHHHHHHHHHHHHhCCCCceEEEEE
Confidence            3444555667889999999 999999999999999999999999999999999999999999888764444556899999


Q ss_pred             eEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCC-CCcEEEEEEEEEEE
Q 030085           86 TINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSS-SSIMISSSTVTLLC  161 (183)
Q Consensus        86 ~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~lvA~~t~T~~~  161 (183)
                      +++|++|++.||+|++++++++.||+++++++++++                         + +|+++|++++|+++
T Consensus        92 ~i~fl~pv~~Gd~l~~~a~v~~~gr~~~~~~~~i~~-------------------------~~~g~lva~a~~t~~i  143 (145)
T 2h4u_A           92 NITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTN-------------------------KATGKLIAQGRHTKHL  143 (145)
T ss_dssp             EEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEEE-------------------------TTTCCEEEEEEEEEEC
T ss_pred             EEEEecCCCCCCEEEEEEEEEEcCCcEEEEEEEEEE-------------------------CCCCeEEEEEEEEEEe
Confidence            999999999999999999999999999999999998                         4 79999999999984

>2pim_A Phenylacetic acid degradation-related protein; thioesterase superfamily, phenylacetic acid degradation-RELA protein; 2.20A {Ralstonia eutropha JMP134}

Probab=99.94  E-value=2.8e-26  Score=174.73  Aligned_cols=120  Identities=15%  Similarity=0.179  Sum_probs=111.5

Q ss_pred             cCCCCchhhhcCCEEEEE--eCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC-CceeEEEEEeEEEec
Q 030085           15 IAVPDAPLKAIGFELEEL--TPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG-FKRVAGVQLTINHLK   91 (183)
Q Consensus        15 ~~~~~p~~~~Lg~~~~~~--~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~-~~~~vTv~l~i~flr   91 (183)
                      ....+||.++||++++++  +++++++++++.+.++|+.|++|||++++|+|.++++++....+ +..++|++++|+|++
T Consensus        15 ~~~~~p~~~~lg~~~~~~~~~~~~~~~~~~v~~~~~n~~g~vhGG~~~~l~D~a~~~~~~~~~~~~~~~vt~~l~i~fl~   94 (141)
T 2pim_A           15 EAPVPAVAGTLGGVIRAVDLEAGSLESDYVATDAFLNPVGQVQGGMLGAMLDDVTAMLVTATLEDGASCSTLNLNLSFLR   94 (141)
T ss_dssp             SSCCCHHHHHHTCEEEEEETTTTEEEEEEEECGGGBCTTSSBCHHHHHHHHHHHHHHHHHHTCCTTCCCEEEEEEEEECS
T ss_pred             CCCCCcHHHhhCCEEEEEEcCCCEEEEEEEcCHHHcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEEec
Confidence            345689999999999999  99999999999999999999999999999999999998877653 467899999999999


Q ss_pred             CCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           92 SAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        92 pa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      |++.|+ |++++++++.||+++++++++ +                         ++|+++|++++||++
T Consensus        95 p~~~g~-l~~~a~v~~~g~~~~~~~~~i-~-------------------------~~g~~va~a~~t~~~  137 (141)
T 2pim_A           95 PAQAGL-LRGRARLERRGRNVCNVVGEL-S-------------------------QDGKLVATATATCMV  137 (141)
T ss_dssp             CCCSEE-EEEEEEEEEECSSEEEEEEEE-E-------------------------ETTEEEEEEEEEEEC
T ss_pred             CCCCCe-EEEEEEEEEeCCcEEEEEEEE-C-------------------------CCCcEEEEEEEEEEE
Confidence            999997 999999999999999999999 8                         679999999999994

>2fs2_A Phenylacetic acid degradation protein PAAI; operon, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: d.38.1.5 PDB: 1psu_A

Probab=99.94  E-value=3.6e-26  Score=177.70  Aligned_cols=126  Identities=17%  Similarity=0.151  Sum_probs=112.7

Q ss_pred             cccCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecC
Q 030085           13 KRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKS   92 (183)
Q Consensus        13 ~~~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrp   92 (183)
                      +.+...+||.++||+++++++++++.+++++.+.++|+.|++|||++++|+|.++++++..  .+...+|++++|+|++|
T Consensus        11 ~~~~~~~p~~~~lg~~~~~~~~g~~~~~~~v~~~~~n~~g~vhGG~~~~l~D~a~~~a~~~--~g~~~vt~~l~i~fl~P   88 (151)
T 2fs2_A           11 HAMYENDACAKALGIDIISMDEGFAVVTMTVTAQMLNGHQSCHGGQLFSLADTAFAYACNS--QGLAAVASACTIDFLRP   88 (151)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEETTEEEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHT--TTCCCEEEEEEEEECSC
T ss_pred             HHHhcCCcHHHHcCcEEEEEcCCEEEEEEEcCHHHcCCCCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEEEEEecC
Confidence            3344578999999999999999999999999999999999999999999999999888764  34678999999999999


Q ss_pred             CCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCC
Q 030085           93 AELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVP  166 (183)
Q Consensus        93 a~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p  166 (183)
                      ++.|++|+++|++++.||+++++++++++                         ++|++||.+++||++ ++++
T Consensus        89 v~~Gd~l~~~a~v~~~gr~~~~~~~~i~~-------------------------~~g~lva~a~~t~~~-~~~~  136 (151)
T 2fs2_A           89 GFAGDTLTATAQVRHQGKQTGVYDIEIVN-------------------------QQQKTVALFRGKSHR-IGGT  136 (151)
T ss_dssp             CBTTCEEEEEEEEEEECSSEEEEEEEEEC-------------------------TTSCEEEEEEEEEEC-----
T ss_pred             CCCCCEEEEEEEEEEcCCcEEEEEEEEEe-------------------------CCCCEEEEEEEEEEE-eCCC
Confidence            99999999999999999999999999998                         679999999999994 4443

>2hbo_A Hypothetical protein (NP_422103.1); thioesterase/thiol ester dehydrase-isomerase fold, structura genomics; HET: MSE PE4; 1.85A {Caulobacter vibrioides} SCOP: d.38.1.5

Probab=99.94  E-value=8.8e-26  Score=176.10  Aligned_cols=129  Identities=18%  Similarity=0.173  Sum_probs=116.6

Q ss_pred             hhccccCCCCchhhhcCCEEEEEe-CCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEE
Q 030085           10 KQRKRIAVPDAPLKAIGFELEELT-PERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTIN   88 (183)
Q Consensus        10 ~~~~~~~~~~p~~~~Lg~~~~~~~-~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~   88 (183)
                      .....+...+||.+.||+++++++ ++++++++++.+.|+|+.|++|||++++|+|.++++++....+ ..++|++++|+
T Consensus        16 ~~~~~~~~~~p~~~~lG~~~~~~~~~~~~~~~~~v~~~~~n~~G~vhGG~~~~l~D~a~~~a~~~~~~-~~~vt~~l~i~   94 (158)
T 2hbo_A           16 EGFSQLNWSRGFGRQIGPLFEHREGPGQARLAFRVEEHHTNGLGNCHGGMLMSFADMAWGRIISLQKS-YSWVTVRLMCD   94 (158)
T ss_dssp             TTEEECCCSSSHHHHHCCEEEECSSTTTTCEEEECCGGGBCSSSBBCHHHHHHHHHHHHHHHHHHHHC-EEEEEEEEEEE
T ss_pred             chhEEeccCCcHHHhcCcEEEEecCCCeEEEEEEeCHHHcCCCCchHHHHHHHHHHHHHHHHHHHccC-CcEEEEEEEEE
Confidence            345556778999999999999999 9999999999999999999999999999999999988765433 67899999999


Q ss_pred             EecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCC
Q 030085           89 HLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPV  165 (183)
Q Consensus        89 flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~  165 (183)
                      |++|++.|+.|+++|++++.||+++++++++++                         + |+++|.+++||++..++
T Consensus        95 fl~p~~~Gd~l~~~a~v~~~g~~~~~~~~~i~~-------------------------~-g~lva~a~~t~~~~~~~  145 (158)
T 2hbo_A           95 FLSGAKLGDWVEGEGELISEEDMLFTVRGRIWA-------------------------G-ERTLITGTGVFKALSAR  145 (158)
T ss_dssp             ECSCCBTTCEEEEEEEEEEEETTEEEEEEEEEE-------------------------T-TEEEEEEEEEEEEEEEC
T ss_pred             EecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEE-------------------------C-CEEEEEEEEEEEEeCCC
Confidence            999999999999999999999999999999997                         3 89999999999965444

>1sh8_A Hypothetical protein PA5026; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.50A {Pseudomonas aeruginosa} SCOP: d.38.1.5

Probab=99.94  E-value=4.9e-26  Score=175.97  Aligned_cols=120  Identities=16%  Similarity=0.059  Sum_probs=110.4

Q ss_pred             cCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC--CceeEEEEEeEEEecC
Q 030085           15 IAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG--FKRVAGVQLTINHLKS   92 (183)
Q Consensus        15 ~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~--~~~~vTv~l~i~flrp   92 (183)
                      +....||.++||+++++++++++++++++.+. +|+.|++|||++++++|.++++++....+  +..++|++++|+|++|
T Consensus        14 ~~~~~p~~~~lg~~~~~~~~~~~~~~~~~~~~-~N~~g~~hGG~i~~l~D~a~~~~~~~~~~~~~~~~vt~~~~i~fl~p   92 (154)
T 1sh8_A           14 TEEKIAFVQRSGLRAEVLEPGYVRLRMPGAGN-ENHIGSMYAGALFTLAELPGGALFLTSFDSARFYPIVKEMTLRFRRP   92 (154)
T ss_dssp             HHHSSHHHHHHTCEEEEEETTEEEEEECSTTC-BCTTSSBCHHHHHHHHHTHHHHHHHHHSCTTTEEEEEEEEEEEECSC
T ss_pred             hhccCCchhhcceEEEEEeCCeEEEEccCCcc-cCCccchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEEEEEEEEecc
Confidence            34578999999999999999999999999999 99999999999999999999998876655  3567899999999999


Q ss_pred             CCCCCEEEEEEEE------------EEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085           93 AELGDLVRAVATP------------INLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus        93 a~~Gd~l~a~a~v------------i~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      ++ |+ |+++|++            ++.||++.++++++++                         ++|++||.+++||+
T Consensus        93 ~~-G~-l~a~a~v~~~~~~~~~~~~~~~gr~~~~~~~~v~~-------------------------~~g~~va~~~~t~~  145 (154)
T 1sh8_A           93 AK-GD-IRVEARLDAERIRQLETEAGERGKAEYSLELQLTD-------------------------EQGEVVAESAALYQ  145 (154)
T ss_dssp             CC-SC-EEEEEECCHHHHHHHHHHHHHHSEEEEEEEEEEEC-------------------------TTCCEEEEEEEEEE
T ss_pred             CC-CC-EEEEEECCHHHHHHHHHHHHhCCceEEEEEEEEEe-------------------------CCCCEEEEEEEEEE
Confidence            99 96 9999999            7999999999999998                         67999999999999


Q ss_pred             Ee
Q 030085          161 CN  162 (183)
Q Consensus       161 ~~  162 (183)
                      +.
T Consensus       146 ~~  147 (154)
T 1sh8_A          146 LR  147 (154)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>1zki_A Hypothetical protein PA5202; structural genomics, PSI, protein ST initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Pseudomonas aeruginosa} SCOP: d.38.1.5

Probab=99.94  E-value=7.6e-25  Score=164.64  Aligned_cols=123  Identities=14%  Similarity=0.162  Sum_probs=112.3

Q ss_pred             hccccCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC-CceeEEEEEeEEE
Q 030085           11 QRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG-FKRVAGVQLTINH   89 (183)
Q Consensus        11 ~~~~~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~-~~~~vTv~l~i~f   89 (183)
                      +.+.+. .+||.++||+++++++++++++++++.+.++|+.|.+|||++++|+|.++++++....+ +...+|++++++|
T Consensus         7 ~~~~~~-~~p~~~~lg~~~~~~~~~~~~~~~~v~~~~~n~~g~vhgG~~~~l~d~a~~~~~~~~~~~~~~~vt~~l~i~f   85 (133)
T 1zki_A            7 PAREQM-ISAYSELVGLDPVSLGDGVAEVRLPMAAHLRNRGGVMHGGALFSLMDVTMGLACSSSHGFDRQSVTLECKINY   85 (133)
T ss_dssp             CCGGGS-CCHHHHHHTCEEEEECSSEEEEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHHHCTTSCEEEEEEEEEE
T ss_pred             hHHhhh-hhHHHHhcCcEEEEecCCEEEEEEECCHHHcCCCCcCcHHHHHHHHHHHHHHHHHhccCCCCceEEEEEEEEE
Confidence            344444 89999999999999999999999999999999999999999999999999988876544 4678999999999


Q ss_pred             ecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           90 LKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        90 lrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      ++|++ |+.|++++++++.||++.++++++++                          +|+++|.+++||++
T Consensus        86 l~p~~-g~~l~~~a~v~~~g~~~~~~~~~i~~--------------------------~g~~va~a~~~~~~  130 (133)
T 1zki_A           86 IRAVA-DGEVRCVARVLHAGRRSLVVEAEVRQ--------------------------GDKLVAKGQGTFAQ  130 (133)
T ss_dssp             CSCCC-SSEEEEEEEEEEECSSEEEEEEEEEE--------------------------TTEEEEEEEEEEEE
T ss_pred             ECcCC-CCEEEEEEEEEECCceEEEEEEEEEE--------------------------CCEEEEEEEEEEEE
Confidence            99999 98999999999999999999999996                          47999999999984

>2qwz_A Phenylacetic acid degradation-related protein; putative thioesterase, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=99.93  E-value=2.6e-25  Score=175.20  Aligned_cols=116  Identities=16%  Similarity=0.160  Sum_probs=106.8

Q ss_pred             hhhh-cCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC-CceeEEEEEeEEEecCCCCCCE
Q 030085           21 PLKA-IGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG-FKRVAGVQLTINHLKSAELGDL   98 (183)
Q Consensus        21 ~~~~-Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~-~~~~vTv~l~i~flrpa~~Gd~   98 (183)
                      |... ||+++++++++++++++++.+.++|+.|++|||++++|+|.++++++....+ +..++|++++|+|++|++.|+.
T Consensus        37 ~p~~~lg~~v~~~~~g~~~~~~~v~~~~~n~~g~vhGG~l~al~D~a~~~a~~~~~~~~~~~vt~~l~i~flrPv~~Gd~  116 (159)
T 2qwz_A           37 FPQIQGEFSIDALAKGEITMRLNVQERHLRPGGTVSGPSMFALADVSVYALVLAHLGREALAVTTNASLDFMRKPESGRD  116 (159)
T ss_dssp             CGGGTTTEEEEEECSSEEEEEECGGGGCCCTTCCCCHHHHHHHHHHHHHHHHHHHHCTTCCCEEEEEEEEECSCCCTTSC
T ss_pred             CccccCCeEEEEecCCEEEEEEECCHHHcCCCCcEeHHHHHHHHHHHHHHHHHHhCCCCCceEEEEEEEEEEcCCCCCCE
Confidence            4444 9999999999999999999999999999999999999999999998876544 3678999999999999999999


Q ss_pred             EEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCC-CCcEEEEEEEEEEE
Q 030085           99 VRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSS-SSIMISSSTVTLLC  161 (183)
Q Consensus        99 l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~lvA~~t~T~~~  161 (183)
                      |+++|++++.||+++++++++++                         + +|++||.+++||++
T Consensus       117 l~a~a~v~~~gr~~~~~~~~v~~-------------------------~~~g~lvA~a~~t~~i  155 (159)
T 2qwz_A          117 LLGQARLLKLGRTLAVGDILLFS-------------------------EGMEAPVARSTMTYSI  155 (159)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEE-------------------------TTCSSCSEEEEEEEEC
T ss_pred             EEEEEEEEEcCCCEEEEEEEEEE-------------------------CCCCcEEEEEEEEEEE
Confidence            99999999999999999999998                         4 79999999999983

>1wlu_A PAAI protein, phenylacetic acid degradation protein PAAI; thioesterase, hot DOG fold, S genomics; 1.45A {Thermus thermophilus HB8} SCOP: d.38.1.5 PDB: 1j1y_A 1wlv_A* 1wm6_A 1wn3_A* 2dsl_A

Probab=99.92  E-value=5.9e-24  Score=160.62  Aligned_cols=116  Identities=17%  Similarity=0.239  Sum_probs=108.5

Q ss_pred             CCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCC
Q 030085           18 PDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGD   97 (183)
Q Consensus        18 ~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd   97 (183)
                      .+||.++||+++.+++++++++++++.+.++|+.|.+|||++++++|.++++++...  + ..+|++++++|++|++.||
T Consensus         2 ~~p~~~~lg~~~~~~~~g~~~~~~~v~~~~~n~~g~vhgG~~~~l~d~a~~~~~~~~--g-~~vt~~~~i~f~~p~~~Gd   78 (136)
T 1wlu_A            2 RDPFMEALGLKVLHLAPGEAVVAGEVRADHLNLHGTAHGGFLYALADSAFALASNTR--G-PAVALSCRMDYFRPLGAGA   78 (136)
T ss_dssp             CCHHHHHTTCEEEEEETTEEEEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHTT--S-CEEEEEEEEEECSCCCTTC
T ss_pred             CChHHHhcCcEEEEEcCCEEEEEEECCHHHcCCCCCChHHHHHHHHHHHHHHHHhcC--C-CEEEEEEEEEEeCCCCCCC
Confidence            479999999999999999999999999999999999999999999999998776542  4 7899999999999999999


Q ss_pred             EEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085           98 LVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus        98 ~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      .|++++++++.||++.++++++++                         + |+++|.+++||++.
T Consensus        79 ~l~~~~~v~~~g~~~~~~~~~i~~-------------------------~-g~~va~~~~~~~~~  117 (136)
T 1wlu_A           79 RVEARAVEVNLSRRTATYRVEVVS-------------------------E-GKLVALFTGTVFRL  117 (136)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEEEE-------------------------T-TEEEEEEEEEEEEC
T ss_pred             EEEEEEEEEECCCcEEEEEEEEEE-------------------------C-CEEEEEEEEEEEEE
Confidence            999999999999999999999998                         5 89999999999954

>1t82_A Hypothetical acetyltransferase; structural genomics, alpha-beta dimeric protein with A fold resembling A hotdog, PSI; 1.70A {Shewanella oneidensis} SCOP: d.38.1.5

Probab=99.92  E-value=7e-25  Score=172.73  Aligned_cols=117  Identities=8%  Similarity=-0.065  Sum_probs=103.3

Q ss_pred             CCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC----CceeEEEEEeEEEec
Q 030085           16 AVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG----FKRVAGVQLTINHLK   91 (183)
Q Consensus        16 ~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~----~~~~vTv~l~i~flr   91 (183)
                      ....||.++||++++++++|+++++||++++ .|+.|++|||++++|+|.++++++....+    ...++|++++|||+|
T Consensus        23 ~~~~P~~~~lGi~i~~~~~g~~~~~~~~~~~-~N~~GtvHGG~l~tLaD~a~g~a~~~~~~~~g~~~~~vt~~~~i~flr  101 (155)
T 1t82_A           23 HSTIPVSEFMQIAPLSFTDGELSVSAPLAPN-INLHHTMFAGSIYTIMTLTGWGMVWLQQQLLNVDGDIVLADAHIRYLA  101 (155)
T ss_dssp             HHHCHHHHHTTCEEEEEETTEEEEECCSGGG-BCTTSSBCHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEEEEECS
T ss_pred             HhhCCcHHhCceEEEEEeCCEEEEEEECccc-cCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEec
Confidence            3457999999999999999999999999999 79999999999999999999887655432    346899999999999


Q ss_pred             CCCCCCEEEEEEEEEE--------eCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           92 SAELGDLVRAVATPIN--------LGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        92 pa~~Gd~l~a~a~vi~--------~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      |++ |+ ++++|++.+        .||++.+++++|+|                         ++| +||.+++||.+
T Consensus       102 pa~-~~-l~a~a~~~~~~~~~~~~~gr~~~~~~v~i~d-------------------------~~g-lvA~~~~t~~i  151 (155)
T 1t82_A          102 PVT-SA-PEVKVRWPDTNLSPLQRGRKAKVKLEVQLFC-------------------------DGK-LCAQFDGLYVS  151 (155)
T ss_dssp             CCC-SC-CEEEEECCSCCCGGGGGTCCEEEEEEEEEEE-------------------------TTE-EEEEEEEEEEE
T ss_pred             ccC-CC-EEEEEEeCHHHHHHHHhCCceEEEEEEEEEE-------------------------CCc-CEEEEEEEEEE
Confidence            999 53 799998764        59999999999998                         667 99999999984

>4ae8_A Thioesterase superfamily member 4; hydrolase, hotdog-fold; 1.59A {Homo sapiens} PDB: 4gah_A*

Probab=99.92  E-value=2.1e-24  Score=179.40  Aligned_cols=116  Identities=19%  Similarity=0.137  Sum_probs=106.1

Q ss_pred             chhhhcCCEEEE---EeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCC
Q 030085           20 APLKAIGFELEE---LTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELG   96 (183)
Q Consensus        20 p~~~~Lg~~~~~---~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~G   96 (183)
                      ++.+.||+++++   .++++++++|++.+.++|+.|++|||++++|+|.++++++...  +..++|++|+|+|+||++.|
T Consensus        85 ~~~~~LGi~~~~f~~~~~g~v~~~~~v~~~~~n~~G~vHGG~iatLlD~a~g~aa~~~--g~~~vT~~L~i~flrP~~~G  162 (211)
T 4ae8_A           85 SFDDGLGFEYVMFYNDIEKRMVCLFQGGPYLEGPPGFIHGGAIATMIDATVGMCAMMA--GGIVMTANLNINYKRPIPLC  162 (211)
T ss_dssp             CSCTTTSEEEEEEEETTTTEEEEEEEECGGGBSSTTBBCHHHHHHHHHHHHHHHHHHH--HSCEEEEEEEEEECSCCBTT
T ss_pred             chHhhcCcEEEEEEecCCCEEEEEEEcCHHHcCCCCcChHHHHHHHHHHHHHHHHHhc--CCceEEEEEEEEEeccCCCC
Confidence            344899999997   5899999999999999999999999999999999999988764  35799999999999999999


Q ss_pred             CEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCC-cEEEEEEEEEEEe
Q 030085           97 DLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSS-IMISSSTVTLLCN  162 (183)
Q Consensus        97 d~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~lvA~~t~T~~~~  162 (183)
                      +.|+++|++++.|+|.++++++|++                         ++| +++|.+++||++.
T Consensus       163 ~~l~a~a~v~~~ggr~~~v~~~i~~-------------------------~dg~~lvA~a~~tfv~~  204 (211)
T 4ae8_A          163 SVVMINSQLDKVEGRKFFVSCNVQS-------------------------VDEKTLYSEATSLFIKL  204 (211)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEEEE-------------------------TTSCCEEEEEEEEEEEC
T ss_pred             CEEEEEEEEEEeCCCEEEEEEEEEE-------------------------CCCCEEEEEEEEEEEEE
Confidence            9999999999999999999999998                         456 7999999999953

>4ae7_A Thioesterase superfamily member 5; hydrolase, hotdog-fold; 1.45A {Homo sapiens}

Probab=99.91  E-value=5.8e-24  Score=178.54  Aligned_cols=127  Identities=17%  Similarity=0.076  Sum_probs=109.8

Q ss_pred             cccCCCCchhhhcCCEEEE---EeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEE
Q 030085           13 KRIAVPDAPLKAIGFELEE---LTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINH   89 (183)
Q Consensus        13 ~~~~~~~p~~~~Lg~~~~~---~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~f   89 (183)
                      .+++........||+++..   .++++++++|++.+.++|+.|.+|||++++|+|.++++++...  +..++|++|+|+|
T Consensus        86 ~~~f~r~~~~~gLG~e~vif~~~~~g~vv~~~~v~~~~~n~~G~vHGGviatLlD~a~g~aa~~~--g~~~VT~~L~I~y  163 (220)
T 4ae7_A           86 CRIFTRCIQVEGQGFEYVIFFQPTQKKSVCLFQPGSYLEGPPGFAHGGSLAAMMDETFSKTAFLA--GEGLFTLSLNIRF  163 (220)
T ss_dssp             CCCGGGSCCSTTTSEEEEEEEETTTTEEEEEEEECGGGBSSTTBBCHHHHHHHHHHHHHHHHHHH--HCEEEEEEEEEEE
T ss_pred             ccccccccCcCcceeEEEEEeeCCCCEEEEEEEcCHHHcCCCCcchHHHHHHHHHHHHHHHHHhc--CCceEEEEEEEEE
Confidence            3444444445889999884   5789999999999999999999999999999999999998763  3578999999999


Q ss_pred             ecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCC-cEEEEEEEEEEEecCCC
Q 030085           90 LKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSS-IMISSSTVTLLCNLPVP  166 (183)
Q Consensus        90 lrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~lvA~~t~T~~~~~p~p  166 (183)
                      ++|++.|+.|+++|++++.++|.++++++|++                         ++| +++|.++++|++.-+..
T Consensus       164 lrPv~~G~~l~~~a~Vv~~~gR~~~v~~eI~d-------------------------~dG~~lvA~Ata~fv~~~~ek  216 (220)
T 4ae7_A          164 KNLIPVDSLVVMDVEVDKIEDQKLYMSCIAHS-------------------------RDQQTVYAKSSGVFLQLQLEE  216 (220)
T ss_dssp             CSCCBTTCCEEEEEEEEEEETTEEEEEEEEEC-------------------------TTSSCEEEEEEEEEEECCCCC
T ss_pred             ccccCCCCEEEEEEEEEEeCCCEEEEEEEEEE-------------------------CCCCEEEEEEEEEEEEecccc
Confidence            99999999999999999988889999999998                         567 99999999999543333

>1ixl_A Hypothetical protein PH1136; alpha+beta, hot-DOG-fold, structural genomics, unknown funct; 1.94A {Pyrococcus horikoshii} SCOP: d.38.1.5

Probab=99.91  E-value=7.6e-23  Score=153.88  Aligned_cols=119  Identities=11%  Similarity=0.063  Sum_probs=108.0

Q ss_pred             cccCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCC-cCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEec
Q 030085           13 KRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNS-CQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLK   91 (183)
Q Consensus        13 ~~~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~-~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flr   91 (183)
                      ..+..++||.++||+++.++++|++++++++.+.+ +|+.|.+|||++++|+|.++++++.  .  ...+|++++++|++
T Consensus         4 ~~l~~~~p~~~~lg~~~~~~~~g~~~~~~~v~~~~~~n~~g~~hGg~~~~l~d~~~~~~~~--~--~~~vt~~~~i~f~~   79 (131)
T 1ixl_A            4 VEQRTHKLTSRILVGKPILIKEGYAEVELETIDEMKVDEKGLVHGGFTFGLADYAAMLAVN--E--PTVVLGKAEVRFTK   79 (131)
T ss_dssp             CCCCSCTTCCTTTTCEEEEEETTEEEEEEECCGGGBSSTTCBBCHHHHHHHHHHHHHHHHC--C--TTEEEEEEEEEECS
T ss_pred             eeEEeCcchhheeeEEEEEEeCCEEEEEEEecHHHccCCCCEEEhHHHHHHHHHHHHhhcc--C--CceEEEEEEEEECC
Confidence            34567899999999999999999999999999999 7999999999999999999887653  1  34799999999999


Q ss_pred             CCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           92 SAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        92 pa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      |++.||+|++++++++.|++..++++++++                          +|+++|+++.++++
T Consensus        80 pv~~Gd~l~~~~~v~~~~~~~~~~~~~v~~--------------------------~g~~va~g~~~~~~  123 (131)
T 1ixl_A           80 PVKVGDKLVAKAKIIEDLGKKKIVEVKVYR--------------------------EEEVVLEGKFYCYV  123 (131)
T ss_dssp             CCBTTCEEEEEEEEEEEETTEEEEEEEEEE--------------------------TTEEEEEEEEEEEE
T ss_pred             CCCCCCEEEEEEEEEEecCcEEEEEEEEEE--------------------------CCEEEEEEEEEEEE
Confidence            999999999999999999999999999995                          47899999999983

>3lw3_A HP0420 homologue; hotdog-fold, structural genomics, unknown function; 1.60A {Helicobacter felis} PDB: 3lwg_A

Probab=99.90  E-value=1.2e-22  Score=160.41  Aligned_cols=120  Identities=15%  Similarity=0.042  Sum_probs=109.7

Q ss_pred             ccccCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEec
Q 030085           12 RKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLK   91 (183)
Q Consensus        12 ~~~~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flr   91 (183)
                      .+.+...++|.+.||++++++++|+++.+|+++++|.|..|.+|||++++|||.++++++.    ...++|++.+|+|++
T Consensus        13 ~~~~~~~~~~~~~lg~el~e~~~G~A~~~~~v~~~m~n~~~~vHGG~ifslAD~aa~~a~n----~~~~Vt~~~~I~Fl~   88 (145)
T 3lw3_A           13 EEGLLVCTRLDQNLCAELISFGSGKATVCLTPKEFMLCEDDVVHAGFIVGAASFAALCALN----KKNSLISSMKVNLLA   88 (145)
T ss_dssp             CTTCCSCTTCCGGGSCEEEEEETTEEEEEECCCGGGEEETTEECHHHHHHHHHHHHHHHHC----CTTEEEEEEEEEECS
T ss_pred             HHHHhhchhHHHHhcEEEEEEECCEEEEEEEeCHHHhCCCCcEeHHHHHHHHHHHHHHHhC----CCCEEEEEEEEEECc
Confidence            3557889999999999999999999999999999999999999999999999999876552    246899999999999


Q ss_pred             CCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           92 SAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        92 pa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      |++.||.|+++|++++.|++..+++++++.                          ++++|..|+.++++
T Consensus        89 Pv~~Gd~l~A~A~v~~~g~r~~~v~V~v~~--------------------------~~~~V~~G~f~~~~  132 (145)
T 3lw3_A           89 PIEIKQEIYFNATITHTSSKKSTIRVEGEF--------------------------MEIKVFEGDFEILV  132 (145)
T ss_dssp             CCCTTCCEEEEEEEEEECSSEEEEEEEEEE--------------------------TTEEEEEEEEEEEE
T ss_pred             cCCCCCEEEEEEEEEEECCCEEEEEEEEEE--------------------------CCEEEEEEEEEEEE
Confidence            999999999999999999999999999995                          46889999999984

>2ov9_A Hypothetical protein; rhodococcus SP. RHA1, RHA08564, structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Rhodococcus SP} SCOP: d.38.1.5

Probab=99.89  E-value=2.9e-22  Score=166.65  Aligned_cols=112  Identities=17%  Similarity=0.107  Sum_probs=104.5

Q ss_pred             hhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEE
Q 030085           23 KAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAV  102 (183)
Q Consensus        23 ~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~  102 (183)
                      ..|++++.+.++++++++|++.+.++|+.|.+|||++++|+|.++++++...  +..++|++++|+|++|++.|+.|+++
T Consensus        98 ~~l~l~~~~~~~g~v~~~~~v~~~~~n~~G~vHGG~latLlD~a~g~a~~~~--g~~~vT~~l~v~flrPv~~G~~l~~~  175 (216)
T 2ov9_A           98 LAPPVVLEGLSDGSVRGTVTLTIPYQGPPGHVHGGVSALLLDHVLGVANAWG--GKAGMTAQLSTRYHRPTPLFEPLTLT  175 (216)
T ss_dssp             TCCCCCCEECTTSCEEEEEECCGGGBSSTTBBCHHHHHHHHHHHHHHHHHHT--TCCCEEEEEEEEECSCCBSSSEEEEE
T ss_pred             ccCceEEEEccCCEEEEEEEeCHHHcCCCCeEhHHHHHHHHHHHHHHHHHhc--CCceEEEEEEEEEecCCCCCCEEEEE
Confidence            4688889999999999999999999999999999999999999999988764  45689999999999999999999999


Q ss_pred             EEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          103 ATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       103 a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      |++++.|+++++++++|++                         ++|++||+++++|++
T Consensus       176 a~V~~~g~r~~~v~~~i~~-------------------------~~G~lvA~a~~t~v~  209 (216)
T 2ov9_A          176 GKLMSVDGRKITTAGDIRT-------------------------ADGQVCVSVEGLFVD  209 (216)
T ss_dssp             EEEEEEETTEEEEEEEEEC-------------------------TTCCEEEEEEEEEEC
T ss_pred             EEEEEeCCCEEEEEEEEEE-------------------------CCCcEEEEEEEEEEE
Confidence            9999999999999999998                         679999999999984

>2prx_A Thioesterase superfamily protein; ZP_00837258.1, structural joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.50A {Shewanella loihica}

Probab=99.86  E-value=3.2e-21  Score=149.75  Aligned_cols=116  Identities=14%  Similarity=0.100  Sum_probs=89.3

Q ss_pred             hhhhcCCEEEEEeCC-EEEEEEEcCCCCcCCCCcccHHHHHHHHHHH-HHHHHHHhc-----------CCceeEEEEEeE
Q 030085           21 PLKAIGFELEELTPE-RIIGCFRVTQNSCQPFKVLHGGVSALIAESL-ASMGAHMAS-----------GFKRVAGVQLTI   87 (183)
Q Consensus        21 ~~~~Lg~~~~~~~~g-~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A-~g~a~~~~~-----------~~~~~vTv~l~i   87 (183)
                      +.+.+|+++....++ ++++++++.+.++|+.|.+|||++++|+|.+ +++++....           +....+|+++++
T Consensus        23 ~~~~~gl~~~~~~~g~~~~~~~~~~~~~~n~~G~vhGG~~~~l~D~~~~g~a~~~~~~~~g~~~~~~~~~~~~vt~~~~i  102 (160)
T 2prx_A           23 RNNEQGHQLKSYWRGEQTIAHFMPKPFHTAIPGFVYGGLIASLIDCHGTGSASAAAQRALEQAGEQLDEPPRFVTAALNI  102 (160)
T ss_dssp             --------CCCEEETTEEEEEECCCTTCBSSTTBBCHHHHHHHHHHHHHHHHHHHHC-------------CCEEEEEEEE
T ss_pred             CCCcccceEEEEEcCCEEEEEEEeCHHHcCCCCceeHHHHHHHHHhhhhHHHHHHHHhhcccccccccCceEEEEEEEEE
Confidence            456789988877655 8999999999999999999999999999985 455443222           113689999999


Q ss_pred             EEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085           88 NHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus        88 ~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      +|++|++.||.|++++++++.||++.++++++++                          +|+++|++++||++.
T Consensus       103 ~f~~pv~~gd~l~~~a~v~~~g~~~~~~~~~i~~--------------------------~g~~va~a~~~~~~~  151 (160)
T 2prx_A          103 DYLAPTPMGVELELVGEIKEVKPRKVVVEIALSA--------------------------DGKLCARGHMVAVKM  151 (160)
T ss_dssp             EECSCCBTTSCEEEEEEEEEC--CEEEEEEEEEC-----------------------------CCEEEEEEEEEC
T ss_pred             EEecCcCCCCEEEEEEEEEEecCCEEEEEEEEEE--------------------------CCEEEEEEEEEEEEE
Confidence            9999999999999999999999999999999996                          379999999999953

>3bnv_A CJ0977; virulence factor, hot-DOG fold, flagel unknown function; HET: MSE; 2.60A {Campylobacter jejuni}

Probab=99.86  E-value=1.3e-20  Score=148.29  Aligned_cols=118  Identities=9%  Similarity=-0.005  Sum_probs=106.3

Q ss_pred             ccCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCc-CCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecC
Q 030085           14 RIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSC-QPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKS   92 (183)
Q Consensus        14 ~~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~-Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrp   92 (183)
                      .+...+||.+.|+.++.++++|+++++++++++|+ |+.|.+|||++++++|.++++++    +...++|++++++|++|
T Consensus        24 ~~~~~~~~~~~L~~~i~e~~~g~a~~~~~v~~~~~~n~~g~~HGg~~~alad~a~~~~~----~~~~~vt~~~~i~F~~P   99 (152)
T 3bnv_A           24 ELLTCPELNTSLAGTIIEIDKNYAKSILITTSEMVADDQGLIFDAFIFAAANYVAQASI----NKEFSVIIGSKCFFYAP   99 (152)
T ss_dssp             TCCSSTTCCHHHHCEEEEEETTEEEEEEECCGGGBSSTTCBBCHHHHHHHHHHHHHHHH----CCSSEEEEEEEEEECSC
T ss_pred             hhhcChhHHHHhCcEEEEEeCCEEEEEEEcCHHHhCCCCCcccHHHHHHHHHHHHHHHc----CCCcEEEEEEEEEEeCC
Confidence            45668999999999999999999999999999998 99999999999999999875432    34568999999999999


Q ss_pred             CCCCCEEEEEEEEEEeC-CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           93 AELGDLVRAVATPINLG-KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        93 a~~Gd~l~a~a~vi~~G-r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      +++||.|+++|++++.| +++.+++++++.                          +|++++.++.++++
T Consensus       100 V~~GD~L~a~a~v~~~~~~~~~~v~~~~~~--------------------------~g~~v~~g~~~~~v  143 (152)
T 3bnv_A          100 LKLGDVLELEAHALFDETSKKRDVKVVGHV--------------------------KEIKMFEGTIQVVS  143 (152)
T ss_dssp             CBTTCEEEEEEEECCCSSCSEEEEEEEEEE--------------------------TTEEEEEEEEEEEE
T ss_pred             CCCCCEEEEEEEEEEEcCCcEEEEEEEEEE--------------------------CCEEEEEEEEEEEE
Confidence            99999999999999999 999999999985                          47999999888874

>2qq2_A Cytosolic acyl coenzyme A thioester hydrolase; ACOT7, C-terminal domain, thioesterase, structural genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens}

Probab=99.85  E-value=3.1e-21  Score=156.12  Aligned_cols=131  Identities=14%  Similarity=0.073  Sum_probs=100.5

Q ss_pred             cccCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEe-EEEec
Q 030085           13 KRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLT-INHLK   91 (183)
Q Consensus        13 ~~~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~-i~flr   91 (183)
                      ..+...+||.++||+++.+++++++++++++.+.++|++|.+|||++++++|.++++++....+ ..++|++++ |+|++
T Consensus        19 ~~~~~~~~~~~~lg~~~~~~~~g~~~~~~~v~~~~~n~~G~vhgG~~~~~~D~a~~~~a~~~~~-~~~vt~~~~~i~f~~   97 (193)
T 2qq2_A           19 YFQSMGDIVQPVLNPEPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCK-TNIVTASVDAINFHD   97 (193)
T ss_dssp             --------------CCTTSHHHHCEEEEEECCGGGBCSSSBBCHHHHHHHHHHHHHHHHHHHHS-SEEEEEEEEEEEECS
T ss_pred             HHHhcccchhHhcCccccccCCCEEEEEEEeCHHHcCCCCcChHHHHHHHHHHHHHHHHHHHcC-CCeEEEEEeEEEEcc
Confidence            3456789999999999999999999999999999999999999999999999999887655433 467899997 99999


Q ss_pred             CCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085           92 SAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus        92 pa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      |+..||.|+++++|++.||++.+++++|++++.                  ...+++++++|.++.|+.+.
T Consensus        98 Pv~~Gd~l~v~a~v~~~Grss~~~~~~v~~~~~------------------~~~~g~~~l~a~a~~t~V~v  150 (193)
T 2qq2_A           98 KIRKGCVITISGRMTFTSNKSMEIEVLVDADPV------------------VDSSQKRYRAASAFFTYVSL  150 (193)
T ss_dssp             CCBTTEEEEEEEEEEEECSSEEEEEEEEEEEEC------------------C--CCCCEEEEEEEEEEEEE
T ss_pred             CCCCCCEEEEEEEEEecCCCEEEEEEEEEeccc------------------cCCCCceEEEEEEEEEEEEE
Confidence            999999999999999999999999999998310                  00002357999999999864

>3d6l_A Putative hydrolase; hot DOG fold, thioesterase, acyl-COA; 2.59A {Campylobacter jejuni}

Probab=99.81  E-value=4.9e-19  Score=132.86  Aligned_cols=112  Identities=17%  Similarity=0.180  Sum_probs=93.2

Q ss_pred             CCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEe-EEEecCCCCCCEEEEEEEEEEeCCcE
Q 030085           34 PERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLT-INHLKSAELGDLVRAVATPINLGKTI  112 (183)
Q Consensus        34 ~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~-i~flrpa~~Gd~l~a~a~vi~~Gr~~  112 (183)
                      ++++++++++.+.++|+.|.+|||++++++|.++++++.... +...+|++++ ++|++|+..||.|++++++++.||++
T Consensus         4 ~g~~~~~~~v~~~~~n~~G~v~gg~~~~~~d~a~~~~~~~~~-~~~~vt~~~~~i~f~~pv~~gd~l~v~~~v~~~g~~s   82 (137)
T 3d6l_A            4 MGEPKLKIVAMPSDTNPAGNIFGGWILSQIDLAGAIAARELS-PERVVTISMDKVVFKEPVFIGDIISCYSKVVNVGNTS   82 (137)
T ss_dssp             SCSCSEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHTSS-SSEEEEEEEEEEECCSCCCTTCEEEEEEEEEEECSSE
T ss_pred             CceEEEEEEcCHHHcCCCCeEEHHHHHHHHHHHHHHHHHHhC-CCCEEEEEECcEEEeCCccCCCEEEEEEEEEEeCCcE
Confidence            478889999999999999999999999999999887765433 3458999995 99999999999999999999999999


Q ss_pred             EEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEec
Q 030085          113 QVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNL  163 (183)
Q Consensus       113 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~  163 (183)
                      .++++++++.+.                 +....++++++|+++.|+.+.-
T Consensus        83 ~~~~~~i~~~~~-----------------~~~~~g~~~~~a~a~~t~v~~d  116 (137)
T 3d6l_A           83 ISVEVEVTAQRV-----------------DSQGCTSCINVTSALVTYVSVT  116 (137)
T ss_dssp             EEEEEEEEEEEE-----------------CTTSCEEEEEEEEEEEEEEEEC
T ss_pred             EEEEEEEEEccC-----------------cccccCceEEEEEEEEEEEEEC
Confidence            999999998210                 0000014689999999998643

>3lmb_A Uncharacterized protein; protein OLEI01261, unknown function, chlorobaculum tepidum T structural genomics, PSI2, MCSG; HET: MSE; 2.10A {Oleispira antarctica rb-8} SCOP: d.38.1.0

Probab=99.79  E-value=1.1e-18  Score=140.19  Aligned_cols=127  Identities=9%  Similarity=-0.036  Sum_probs=102.7

Q ss_pred             cCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHh--cC--CceeEEEEEeEEEe
Q 030085           15 IAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMA--SG--FKRVAGVQLTINHL   90 (183)
Q Consensus        15 ~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~--~~--~~~~vTv~l~i~fl   90 (183)
                      +....||.+.||++++++++++++++||+.++ .|+.|++|||.+++|+|.++++.++..  ..  ...+|+.+.+|+|+
T Consensus        18 l~~~iP~~~~~Gi~i~~~~~~~~~~~~pl~~n-~N~~gT~fGGslfslad~a~~~~~~l~~~~~g~~~~vv~~~~~I~yl   96 (165)
T 3lmb_A           18 FSDHLPISQFMGLEIESYDGDTLILTAPLEPN-INDKQTAFGGSLYNAAVMACWGMVYLKTQEENIACNQVVTEGNMKYI   96 (165)
T ss_dssp             HHHHCHHHHHHTCEEEEECSSEEEEEECSGGG-BCTTSSBCHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEEEEEC
T ss_pred             HHhcCchHHhCCcEEEEEcCCEEEEEEEcCCC-cCCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeEEEEc
Confidence            45568999999999999999999999999996 899999999999999998775543221  12  35789999999999


Q ss_pred             cCCCCCCEEEEEEEE-------------EEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEE
Q 030085           91 KSAELGDLVRAVATP-------------INLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTV  157 (183)
Q Consensus        91 rpa~~Gd~l~a~a~v-------------i~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~  157 (183)
                      +|++.+  +++++++             .+.||....++++|++.+            ++     -+-..+|+++|..++
T Consensus        97 ~P~~~~--~~a~~~~~~~~~~~~i~~~l~~~gK~~~~l~v~I~d~~------------~~-----~~~~~~~~~~a~~~g  157 (165)
T 3lmb_A           97 APVYGR--IRAICHAPDEEELANFFDHFERKGKARISLEAAIYNDA------------CV-----MKIEPETKPSVKFNG  157 (165)
T ss_dssp             SCCCSC--EEEEEECCCHHHHHHHHHHHHHHSEEEEEEEEEEESCT------------TC-----CSCCTTSCCSEEEEE
T ss_pred             cCccCC--eEEEEEeCcHHHHHHHHHHHHhCCceEEEEEEEEEeCC------------cc-----ccccccceEEEEEEE
Confidence            999955  7888887             588999999999999820            00     000024899999999


Q ss_pred             EEEE
Q 030085          158 TLLC  161 (183)
Q Consensus       158 T~~~  161 (183)
                      +|++
T Consensus       158 ~y~~  161 (165)
T 3lmb_A          158 QYAI  161 (165)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9995

>4ien_A Putative acyl-COA hydrolase; hot DOG fold; HET: COA GDP; 2.00A {Neisseria meningitidis}

Probab=99.78  E-value=1.1e-17  Score=132.05  Aligned_cols=111  Identities=18%  Similarity=0.162  Sum_probs=96.4

Q ss_pred             EEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEE-eEEEecCCCCCCEEEEEEEEEEeC
Q 030085           31 ELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL-TINHLKSAELGDLVRAVATPINLG  109 (183)
Q Consensus        31 ~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrpa~~Gd~l~a~a~vi~~G  109 (183)
                      .+.++.+++++.+.+.++|++|.+|||.+++++|.++++++....+ ..++|+.+ +|+|++|++.||.|+++++|++.|
T Consensus         9 ~~~~~~~~~~~~v~p~~~n~~G~v~GG~l~~~~D~a~~~~a~~~~~-~~~vt~~~~~i~F~~Pv~~gd~l~v~a~v~~~G   87 (163)
T 4ien_A            9 QLPSHELIMSELMMPDTANFSGNVHGGELLLLLDQVAYSCASRYSG-NYCVTLSVDKVLFKEPIHIGDLVTFYAAVNYTG   87 (163)
T ss_dssp             CCCTTEEEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHHHHT-SCEEEEEEECEECCSCCBTTCEEEEEEEEEEEC
T ss_pred             cCCCCEEEEEEEcCHHHcCCCCcCcHHHHHHHHHHHHHHHHHHHhC-CcEEEEEEeeEEEeCcCCCCCEEEEEEEEEEcc
Confidence            3468999999999999999999999999999999999988776544 46899998 599999999999999999999999


Q ss_pred             CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085          110 KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus       110 r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      |++..++++++.++.                    .++++++++.+..||.+.
T Consensus        88 rss~~v~~~v~~~~~--------------------~~g~~~~~a~a~~t~V~v  120 (163)
T 4ien_A           88 RTSMEIGIRVEAQNI--------------------RTGEIRHTNSCYFTMVAV  120 (163)
T ss_dssp             SSEEEEEEEEEEECT--------------------TTCCEEEEEEEEEEEEEE
T ss_pred             CCEEEEEEEEEEecC--------------------CCCcEEEEEEEEEEEEEc
Confidence            999999999997310                    013458999999999874

>2f41_A Transcription factor FAPR; 'HOT-DOG' fold, gene regulation; 2.50A {Bacillus subtilis} SCOP: d.38.1.5

Probab=99.77  E-value=5.7e-18  Score=127.04  Aligned_cols=110  Identities=18%  Similarity=0.147  Sum_probs=91.9

Q ss_pred             chhhhcCCEEEEEeCC-EEEEEEEcCCCCc-CCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCC
Q 030085           20 APLKAIGFELEELTPE-RIIGCFRVTQNSC-QPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGD   97 (183)
Q Consensus        20 p~~~~Lg~~~~~~~~g-~v~~~m~v~~~~~-Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd   97 (183)
                      ++.+++| +++++++| ++++++++++++. |+.|.+|||++++++|.+++.+    .+...++|...+++|++|+++||
T Consensus         3 ~~~~lv~-~i~~~~~G~~a~~~~~vt~~~~~n~~gi~hGg~~~alad~~~~~~----~~~~~~~~~~~~i~F~~Pv~~Gd   77 (121)
T 2f41_A            3 SLDEVIG-EIIDLELDDQAISILEIKQEHVFSRNQIARGHHLFAQANSLAVAV----IDDELALTASADIRFTRQVKQGE   77 (121)
T ss_dssp             ---CCSS-EEEEEETTTEEEEEEECCGGGBCSTTCBBCHHHHHHHHHHHHHHT----C---CCCEEEEEEEECSCCBTTC
T ss_pred             Cccccee-eEEEEeCCCEEEEEEEcCHHHhhCCCcEEchhHHHHHHHHHHHHh----cCCceEEEEEeeEEEeCCcCCCC
Confidence            3456788 99999998 9999999999998 9999999999999999886422    22345789999999999999999


Q ss_pred             EEEEEEEEE--EeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085           98 LVRAVATPI--NLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus        98 ~l~a~a~vi--~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      +|+++++++  +..+++.+++++++.                          +|++++.++.+++
T Consensus        78 ~l~~~a~v~~~~~~~~~~~v~~~~~~--------------------------~g~~v~~g~~~~~  116 (121)
T 2f41_A           78 RVVAKAKVTAVEKEKGRTVVEVNSYV--------------------------GEEIVFSGRFDMY  116 (121)
T ss_dssp             EEEEEEEEEEECSSSSCEEEEEEEEE--------------------------TTEEEEEEEEEEC
T ss_pred             EEEEEEEEEEEEccCCEEEEEEEEEE--------------------------CCEEEEEEEEEEE
Confidence            999999999  777778888998874                          5799988887776

>2q2b_A Cytosolic acyl coenzyme A thioester hydrolase; ACOT7, C-terminal domain; 2.50A {Mus musculus}

Probab=99.76  E-value=2.1e-18  Score=137.78  Aligned_cols=124  Identities=13%  Similarity=0.079  Sum_probs=90.0

Q ss_pred             chhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEE-eEEEecCCCCCCE
Q 030085           20 APLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL-TINHLKSAELGDL   98 (183)
Q Consensus        20 p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrpa~~Gd~   98 (183)
                      .....|..+...++++++++++++.+.++|++|.+|||++++++|.++++++....+ ..++|+++ +|+|++|+..|+.
T Consensus        10 ~~~~~~~~~~~~~~~g~~~~~~~v~~~~~n~~G~v~gG~~~~~~D~a~~~~~~~~~~-~~~vt~~~~~i~f~~pv~~Gd~   88 (179)
T 2q2b_A           10 IVQPVLNPEPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCK-TNIVTASVDAINFHDKIRKGCV   88 (179)
T ss_dssp             --------CTTSHHHHCEEEEEECC------CCBCCHHHHHHHHHHHHHHHHHHHHC-SCCEEEEEEEEEECSCCBTTEE
T ss_pred             ccccccCccccccCCCEEEEEEEcCHHHcCCCCcEeHHHHHHHHHHHHHHHHHHHcC-CCeEEEEEeeEEEccCCCCCCE
Confidence            333444444445667899999999999999999999999999999999887655433 45889999 5999999999999


Q ss_pred             EEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085           99 VRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus        99 l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      |+++++|++.|+++.+++++|++.+.                  ....++++++|.++.|+.+.
T Consensus        89 l~v~a~v~~~G~ss~~~~~~v~~~~~------------------~~~~g~~~l~a~a~~t~V~v  134 (179)
T 2q2b_A           89 ITISGRMTFTSNKSMEIEVLVDADPV------------------VDNSQKRYRAASAFFTYVSL  134 (179)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEEEEES------------------CC---CCEEEEEEEEEEECB
T ss_pred             EEEEEEEEEeCCcEEEEEEEEEEccc------------------ccCCCceEEEEEEEEEEEEE
Confidence            99999999999999999999997210                  00002368999999999853

>3bjk_A Acyl-COA thioester hydrolase HI0827; hotdog fold, trimer of dimers, YCIA, structural GENO structure 2 function project, S2F; HET: CIT; 1.90A {Haemophilus influenzae rd KW20} PDB: 1yli_A*

Probab=99.75  E-value=1.5e-16  Score=121.31  Aligned_cols=114  Identities=13%  Similarity=0.128  Sum_probs=91.1

Q ss_pred             EeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCc
Q 030085           32 LTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKT  111 (183)
Q Consensus        32 ~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~  111 (183)
                      +.++++++++++.+.++|+.|.+|||.++.++|.+++.++....++..++....+++|++|+..||.|+++++|.+.|++
T Consensus        11 ~~~~~~~~~~~v~~~~~d~~G~v~gg~~~~~~d~a~~~~~~~~~~~~~~~v~~~~i~f~~pv~~gd~l~v~~~v~~~g~~   90 (153)
T 3bjk_A           11 QSKGVLLLRTLAMPSDTNANGDIFGGWIMSQMAMGGAILAKEIAHGRVVTVAVESMNFIKPISVGDVVCCYGQCLKVGRS   90 (153)
T ss_dssp             -CCSEEEEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHHHTSCEEEEEEEEEEECSCCCTTCEEEEEEEEEEECSS
T ss_pred             CCCCEEEEEEEcCHHHcCCCCcEeHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeeEEEeCCccCCCEEEEEEEEEEecCc
Confidence            47899999999999999999999999999999999877665443433344456699999999999999999999999999


Q ss_pred             EEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085          112 IQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus       112 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      ...+++++++.+.  +               ....++++++|.++.|+.+.
T Consensus        91 s~~~~~~i~~~~~--~---------------~~~~g~~~l~a~a~~~~v~v  124 (153)
T 3bjk_A           91 SIKIKVEVWVKKV--A---------------SEPIGERYCVTDAVFTFVAV  124 (153)
T ss_dssp             EEEEEEEEEEECS--S---------------SSSTTCEEEEEEEEEEEEEB
T ss_pred             EEEEEEEEEEccc--C---------------cccCCceEEEEEEEEEEEEE
Confidence            9999999998200  0               00001127999999999864

>2f3x_A Transcription factor FAPR; 'HOT-DOG' fold / malonyl-COA complex, gene regulation; HET: MLC; 3.10A {Bacillus subtilis} SCOP: d.38.1.5

Probab=99.75  E-value=3.5e-17  Score=129.60  Aligned_cols=115  Identities=17%  Similarity=0.118  Sum_probs=100.2

Q ss_pred             cCCCCchhhhcCCEEEEEeCC-EEEEEEEcCCCCc-CCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecC
Q 030085           15 IAVPDAPLKAIGFELEELTPE-RIIGCFRVTQNSC-QPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKS   92 (183)
Q Consensus        15 ~~~~~p~~~~Lg~~~~~~~~g-~v~~~m~v~~~~~-Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrp   92 (183)
                      .....||..++| +++++++| ++++.+++++++. |+.|.+|||++++++|.+++.+    .+...++|...+++|++|
T Consensus        34 ~~~~~~~~~lvg-~i~e~~~g~~a~~~~~vt~~~~~n~~gi~hGg~~~a~ad~~~~~~----~~~~~~~t~~~~i~F~rP  108 (157)
T 2f3x_A           34 EVKSLSLDEVIG-EIIDLELDDQAISILEIKQEHVFSRNQIARGHHLFAQANSLAVAV----IDDELALTASADIRFTRQ  108 (157)
T ss_dssp             SCCSSCGGGSSS-EEEEEETTTEEEEEEECCGGGBCTTTCBBCHHHHHHHHHHHHHHT----SCSSCCEEEEEEEEECSC
T ss_pred             HHhcCCHHHhee-eEEEEcCCCEEEEEEEcCHHHhcCCCCEEcHHHHHHHHHHHHHHH----cCCceEEEEEEEEEEeCC
Confidence            345678999999 99999998 9999999999998 9999999999999999886322    233568899999999999


Q ss_pred             CCCCCEEEEEEEEE--EeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085           93 AELGDLVRAVATPI--NLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus        93 a~~Gd~l~a~a~vi--~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      +++||+|+++++++  +..+++.+++++++.                          +|++++.++.+++
T Consensus       109 V~~GD~L~a~a~v~~~~~~~~~~~v~~~~~~--------------------------~g~~V~~g~~~~~  152 (157)
T 2f3x_A          109 VKQGERVVAKAKVTAVEKEKGRTVVEVNSYV--------------------------GEEIVFSGRFDMY  152 (157)
T ss_dssp             CBTTCEEEEEEEEEEEETGGGEEEEEEEEEE--------------------------TTEEEEEEEEEEE
T ss_pred             CCCCCEEEEEEEEEEEEccCCEEEEEEEEEE--------------------------CCEEEEEEEEEEE
Confidence            99999999999999  878888889999884                          5799998888887

>1y7u_A Acyl-COA hydrolase; structural genomics, coenzyme A, protein structure initiative, PSI, midwest center for structural GE MCSG; HET: COA; 2.80A {Bacillus cereus} SCOP: d.38.1.1

Probab=99.73  E-value=5.1e-17  Score=128.76  Aligned_cols=113  Identities=19%  Similarity=0.134  Sum_probs=97.1

Q ss_pred             EEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEE-eEEEecCCCCCCEEEEEEEEEE
Q 030085           29 LEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL-TINHLKSAELGDLVRAVATPIN  107 (183)
Q Consensus        29 ~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrpa~~Gd~l~a~a~vi~  107 (183)
                      ...++++++++.+++.+.++|++|.+|||.+++++|.++++++....+ ..++|+++ +|+|++|+..||.|+++++|++
T Consensus        12 ~~~~~~~~~~~~~~v~~~~~n~~G~v~gG~~~~~~D~a~~~~a~~~~~-~~~vt~~~d~i~F~~Pv~~gd~l~v~a~V~~   90 (174)
T 1y7u_A           12 GKTANESRVFKTSRVFPTDLNDHNTLFGGKILSEMDMVASISASRHSR-KECVTASMDWVDFLHPVRSSDCVSYESFVIW   90 (174)
T ss_dssp             EEEGGGGCEEEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHHHC-SEEEEEEECCCCCCSCCCTTCEEEEEEEEEE
T ss_pred             cccCCCcEEEEEEEcCHHHcCCCCcEeHHHHHHHHHHHHHHHHHHHcC-CCeEEEEEccEEEcCCCCCCCEEEEEEEEEE
Confidence            455678999999999999999999999999999999998877655433 57899999 9999999999999999999999


Q ss_pred             eCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085          108 LGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus       108 ~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      .|+++..+++++++++.                    .+++++++|.++.||.+.
T Consensus        91 ~G~ss~~v~~~v~~~~~--------------------~~g~~~l~a~a~~t~V~v  125 (174)
T 1y7u_A           91 TGRTSMEVFVKVVSEYL--------------------ISGEKRIAATSFVTFVAL  125 (174)
T ss_dssp             ECSSEEEEEEEEEEECT--------------------TTCCEEEEEEEEEEEEEE
T ss_pred             eCCCEEEEEEEEEEEcC--------------------CCCcEEEEEEEEEEEEEE
Confidence            99999999999997210                    002348999999999864

>4a0z_A Transcription factor FAPR; lipid homeostasis; HET: MLC; 1.90A {Staphylococcus aureus} PDB: 4a0y_A 4a0x_A* 4a12_A

Probab=99.73  E-value=3.1e-16  Score=128.33  Aligned_cols=109  Identities=17%  Similarity=0.162  Sum_probs=93.7

Q ss_pred             hhhcCCEEEEEeCC-EEEEEEEcCCCCcC-CCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEE
Q 030085           22 LKAIGFELEELTPE-RIIGCFRVTQNSCQ-PFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLV   99 (183)
Q Consensus        22 ~~~Lg~~~~~~~~g-~v~~~m~v~~~~~N-p~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l   99 (183)
                      .+-+--+++++++| ++...|.++++|.| ..|++|||+++++||+++.++    .+...++|.+++|+|++|++.||.|
T Consensus        75 ~~e~vgelv~~~~g~~A~s~l~v~~~m~~~~~givhGg~lfalAds~a~a~----~n~~~aVT~~~~I~fl~Pv~~Gd~L  150 (190)
T 4a0z_A           75 EQEFIGDLIQVNPNVKAQSILDITSDSVFHKTGIARGHVLFAQANSLCVAL----IKQPTVLTHESSIQFIEKVKLNDTV  150 (190)
T ss_dssp             GGGCCSEEEEEETTTEEEEEEECCGGGBCTTTCBBCHHHHHHHHHHHHHHH----SCSSEEEEEEEEEEECSCCBTTCEE
T ss_pred             hhhhhhhhhhccCCceEEEEEEcCHHHhcCcCCcccccchHHHHHHHHhhc----ccCceeEeeehhhhhcccCCCCCEE
Confidence            33344489999988 78999999999975 579999999999999875333    2456799999999999999999999


Q ss_pred             EEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          100 RAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       100 ~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      +++|++++.+++.++++|+++.                          ++++|+.|+.++|
T Consensus       151 va~A~v~~~~gr~~~v~V~i~~--------------------------~d~~Vf~G~F~~f  185 (190)
T 4a0z_A          151 RAEARVVNQTAKHYYVEVKSYV--------------------------KHTLVFKGNFKMF  185 (190)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEE--------------------------TTEEEEEEEEEEE
T ss_pred             EEEEEEEEeCCCEEEEEEEEEE--------------------------CCEEEEEEEEEEE
Confidence            9999999999999999999997                          3578888888877

>2eis_A Hypothetical protein TTHB207; COA binding motif, NPPSFA, national project on protein struc functional analyses; HET: COA; 2.10A {Thermus thermophilus}

Probab=99.73  E-value=3.8e-16  Score=115.73  Aligned_cols=107  Identities=18%  Similarity=0.260  Sum_probs=88.6

Q ss_pred             CEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEE-eEEEecCCCCCCEEEEEEEEEEeCCcEE
Q 030085           35 ERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL-TINHLKSAELGDLVRAVATPINLGKTIQ  113 (183)
Q Consensus        35 g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrpa~~Gd~l~a~a~vi~~Gr~~~  113 (183)
                      |++++++++.+.++|++|.+|||.+++++|.+++.++..... ...+|+.+ +++|++|++.||.|++++++++.|++..
T Consensus         2 g~~~~~~~V~~~~~d~~G~v~gg~~~~~~d~a~~~~~~~~~~-~~~~~~~~~~i~f~~pv~~gd~l~v~~~v~~~g~~s~   80 (133)
T 2eis_A            2 RETRMVYPVFPGETNHYGTLFGGTVLAWMDQAAFVAATRHAR-KKVVTVHADAVDFKRPVPLGAIVELVARLKEVGRTSM   80 (133)
T ss_dssp             -CEEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHHHHT-SCEEEEEEEEEEECSCCBTTCEEEEEEEEEEECSSEE
T ss_pred             CceEEEEEECHHHCCcCceEeHHHHHHHHHHHHHHHHHHhcC-CcEEEEEEccEEEcccccCCCEEEEEEEEEEeCCcEE
Confidence            568899999999999999999999999999998776543333 35666666 7999999999999999999999999999


Q ss_pred             EEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCC-cEEEEEEEEEEEe
Q 030085          114 VWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSS-IMISSSTVTLLCN  162 (183)
Q Consensus       114 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~lvA~~t~T~~~~  162 (183)
                      .+++++++.+.                    ..+++ +++|+++.|+.+.
T Consensus        81 ~~~~~i~~~~~--------------------~~~~~~~~~a~~~~~~v~v  110 (133)
T 2eis_A           81 RVEVEMWVEPV--------------------KEGEEAYLAARGGFVLVAV  110 (133)
T ss_dssp             EEEEEEEECCC--------------------STTCCCEEEEEEEEEEEEB
T ss_pred             EEEEEEEEecC--------------------CCCceeEEEEEEEEEEEEE
Confidence            99999998200                    00126 9999999999864

>3b7k_A Acyl-coenzyme A thioesterase 12; hotdog fold, structural genomics, structural genomics consor SGC, fatty acid metabolism, hydrolase; HET: COA; 2.70A {Homo sapiens}

Probab=99.72  E-value=6.6e-17  Score=140.25  Aligned_cols=121  Identities=11%  Similarity=0.056  Sum_probs=95.4

Q ss_pred             hhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEE-eEEEecCCCCCCEE
Q 030085           21 PLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL-TINHLKSAELGDLV   99 (183)
Q Consensus        21 ~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrpa~~Gd~l   99 (183)
                      -.++||+++++++++++++++.+.+.++|+.|.+|||.+++++|.++++++....+ ..++|+.+ +|+|++|++.|+.|
T Consensus        10 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~n~~G~v~gG~~l~~~D~aa~~~a~~~~~-~~~vta~~~~i~F~~P~~~gd~l   88 (333)
T 3b7k_A           10 GVDLGTENLYFQSMGEVVMSQAIQPAHATARGELSAGQLLKWIDTTACLAAEKHAG-VSCVTASVDDIQFEETARVGQVI   88 (333)
T ss_dssp             ------------CCSEEEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHHHHS-SCEEEEEECCEECSCCCBTTEEE
T ss_pred             hhhccCcEEEEecCCEEEEEEEcCHHHcCCCCcEeHHHHHHHHHHHHHHHHHHHcC-CceEEEEEeeEEEecCCCCCCEE
Confidence            35789999999999999999999999999999999999999999998877765443 45899998 79999999999999


Q ss_pred             EEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085          100 RAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus       100 ~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      +++++|.+.||++..++++|++++.                    .++++++++++..||.+.
T Consensus        89 ~v~a~V~~~G~sS~~v~~~v~~~~~--------------------~~~~~~~~a~a~~t~V~v  131 (333)
T 3b7k_A           89 TIKAKVTRAFSTSMEISIKVMVQDM--------------------LTGIEKLVSVAFSTFVAK  131 (333)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEEEET--------------------TTCCEEEEEEEEEEEEEC
T ss_pred             EEEEEEEEecCceEEEEEEEEEecC--------------------CCCceEEEEEEEEEEEEE
Confidence            9999999999999999999997310                    013568999999999853

>1vpm_A Acyl-COA hydrolase; NP_241664.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative hydrolase; HET: COA; 1.66A {Bacillus halodurans} SCOP: d.38.1.1 PDB: 3sps_A

Probab=99.69  E-value=2.8e-16  Score=123.94  Aligned_cols=112  Identities=16%  Similarity=0.171  Sum_probs=95.2

Q ss_pred             EEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEE-eEEEecCCCCCCEEEEEEEEEEe
Q 030085           30 EELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL-TINHLKSAELGDLVRAVATPINL  108 (183)
Q Consensus        30 ~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrpa~~Gd~l~a~a~vi~~  108 (183)
                      -.+.++.+++++++.+.++|++|.+|||.+++++|.++++++.... +..++|+++ +|+|++|+..||.|+++++|++.
T Consensus        17 ~~~~~~~~~~~~~V~~~d~d~~G~v~gg~~~~~~d~aa~~~~~~~~-g~~~vt~~~~~i~f~~pv~~gd~l~v~~~v~~~   95 (169)
T 1vpm_A           17 YPVERSRTIQTRLVLPPDTNHLGTIFGGKVLAYIDEIAALTAMKHA-NSAVVTASIDSVDFKSSATVGDALELEGFVTHT   95 (169)
T ss_dssp             EEGGGTCEEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHHHH-TSEEEEEEECCCCCCSCCBTTEEEEEEEEEEEE
T ss_pred             ccCCCcEEEEEEEeCHHHcCCCCcEeHHHHHHHHHHHHHHHHHHhC-CCCEEEEEeeeEEEeCCCCCCCEEEEEEEEEEE
Confidence            3456799999999999999999999999999999998766665443 357899999 99999999999999999999999


Q ss_pred             CCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085          109 GKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus       109 Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      |+++..+++++++.+.                    .+++++++|.++.|+.+.
T Consensus        96 g~ss~~~~~~i~~~~~--------------------~~g~~~l~a~a~~t~V~v  129 (169)
T 1vpm_A           96 GRTSMEVYVRVHSNNL--------------------LTGERTLTTESFLTMVAV  129 (169)
T ss_dssp             CSSEEEEEEEEEEEET--------------------TTCCEEEEEEEEEEEEEE
T ss_pred             CCcEEEEEEEEEEecC--------------------CCCceEEEEEEEEEEEEE
Confidence            9999999999997210                    002348999999999864

>2v1o_A Cytosolic acyl coenzyme A thioester hydrolase; acyl-COA thioesterase 7, serine esterase, protein structure, domain duplication, ACOT7, macrophage; HET: COA; 1.78A {Mus musculus}

Probab=99.69  E-value=7.2e-16  Score=117.93  Aligned_cols=104  Identities=12%  Similarity=0.077  Sum_probs=86.7

Q ss_pred             EEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCC----c-eeEEEEE-eEEEecCCCCCCEEEEEEEEEEeCCcE
Q 030085           39 GCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGF----K-RVAGVQL-TINHLKSAELGDLVRAVATPINLGKTI  112 (183)
Q Consensus        39 ~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~----~-~~vTv~l-~i~flrpa~~Gd~l~a~a~vi~~Gr~~  112 (183)
                      +++.+.+.++|++|.+|||.+++++|.++++++......    . .++|+.+ +|+|++|+..||.|.++++|++.|+++
T Consensus         2 ~~~~v~~~~~d~~G~v~gg~~~~~~d~a~~~~~~~~~~~~~~~~~~~vt~~~~~i~f~~Pv~~gd~l~i~~~v~~~g~ss   81 (151)
T 2v1o_A            2 AMRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMCIGEVAHVSAEITYTSKHS   81 (151)
T ss_dssp             EEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHHHHTTTCCSCEEEEEEEECCEECCSCCBTTCEEEEEEEEEEECSSC
T ss_pred             CcEEcCHHHcCcCCcEeHHHHHHHHHHHHHHHHHHHhCcCCCCcceEEEEEEeeEEEeCCCCCCCEEEEEEEEEEeCCcE
Confidence            467889999999999999999999999988776554332    2 4789998 999999999999999999999999999


Q ss_pred             EEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085          113 QVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus       113 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      ..++++|++.+                    ...++++++|.++.|+.+.
T Consensus        82 ~~~~~~v~~~~--------------------~~~g~~~l~a~a~~~~v~v  111 (151)
T 2v1o_A           82 VEVQVHVMSEN--------------------ILTGTKKLTNKATLWYVPL  111 (151)
T ss_dssp             EEEEEEEEEEC--------------------TTTCCEEEEEEEEEEEEEE
T ss_pred             EEEEEEEEEec--------------------CCCCceEEEEEEEEEEEEE
Confidence            99999999721                    0002458999999999864

>2cwz_A Thioesterase family protein; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.85A {Thermus thermophilus} SCOP: d.38.1.7

Probab=99.68  E-value=5.2e-16  Score=120.60  Aligned_cols=106  Identities=16%  Similarity=-0.021  Sum_probs=92.8

Q ss_pred             EEEEEEEcCCCCcCCC-Cc------ccHHHHHHHHHHHHHHHHHHhc-CCceeEEEEEeEEEecCCCCCCEEEEEEEEEE
Q 030085           36 RIIGCFRVTQNSCQPF-KV------LHGGVSALIAESLASMGAHMAS-GFKRVAGVQLTINHLKSAELGDLVRAVATPIN  107 (183)
Q Consensus        36 ~v~~~m~v~~~~~Np~-G~------lHGG~~a~LaD~A~g~a~~~~~-~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~  107 (183)
                      .+.+++++++.+.+++ |.      +|||++.+|+|.+++.++.... ++..+++++++++|++|++.|+.|+++|++++
T Consensus         9 ~~~~~~~Vt~~~~~~~~g~sgd~~v~a~~a~~~l~E~~~~~~~~~~l~~g~~~Vg~~i~~~hl~pv~~G~~V~a~a~~~~   88 (141)
T 2cwz_A            9 EAVFETVVTPEMTVRFEELGPVHPVYATYWMVKHMELAGRKIILPFLEEGEEGIGSYVEARHLASALPGMRVRVVARHEK   88 (141)
T ss_dssp             EEEEEEECCGGGEEEETTTEEEEEEECHHHHHHHHHHHHHHHHTTTCCTTEEEEEEEEEEEECSCCCTTCEEEEEEEEEE
T ss_pred             EEEEEEEECHHHHHHHhcccCChhHhchHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEEEEEcccCCCCCEEEEEEEEEE
Confidence            6889999999998764 55      6999999999999988765554 45678999999999999999999999999999


Q ss_pred             eCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCCC
Q 030085          108 LGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPD  167 (183)
Q Consensus       108 ~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p~  167 (183)
                      .|++..+|+++++|                         ++|++|+.|++|.++. |+.+
T Consensus        89 ~~~~~~~~~v~i~d-------------------------~~g~lv~~g~~t~~iv-~~~~  122 (141)
T 2cwz_A           89 TEGNRVYARVEAYN-------------------------ELGDLIGVGRTEQVIL-PKAK  122 (141)
T ss_dssp             EETTEEEEEEEEEE-------------------------TTCCEEEEEEEEEEEE-EHHH
T ss_pred             ECCCEEEEEEEEEE-------------------------CCCCEEEEEEEEEEEe-cHHH
Confidence            99999999999999                         6789999999999854 5433

>2gvh_A AGR_L_2016P; 15159470, acyl-COA hydrolase, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.50A {Agrobacterium tumefaciens} SCOP: d.38.1.1 d.38.1.1

Probab=99.67  E-value=9.3e-16  Score=129.67  Aligned_cols=108  Identities=17%  Similarity=0.174  Sum_probs=91.7

Q ss_pred             EeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEE-eEEEecCCCCCCEEEEEEEEEEeCC
Q 030085           32 LTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL-TINHLKSAELGDLVRAVATPINLGK  110 (183)
Q Consensus        32 ~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrpa~~Gd~l~a~a~vi~~Gr  110 (183)
                      ..++++++++++.+.++|++|.+|||.+++++|.++++++... .+...+|+++ +++|++|++.||.|++++++++.||
T Consensus       155 ~~~~~~~~~~~v~~~~~n~~G~v~gG~~~~~~d~a~~~~a~~~-~~~~~vt~~~d~i~f~~p~~~gd~l~v~~~v~~~g~  233 (288)
T 2gvh_A          155 DPSDAVTMVEIVFPDQANSAGRMFGGEAIAYMTKAAFVAASRY-CGKLVVLASSERIDFARAIEIGEIVEAQAHVERVGR  233 (288)
T ss_dssp             C---CEEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHHH-HSSEEEEEEECCEEBSSCCBTTEEEEEEEEEEEECS
T ss_pred             cCCceEEEEEEEcHHHCCCCCcCcHHHHHHHHHHHHHHHHHHh-cCCceEEEEeeeEEEeCcccCCCEEEEEEEEEEeCC
Confidence            4568999999999999999999999999999999987766543 3457899999 9999999999999999999999999


Q ss_pred             cEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCC--cEEEEEEEEEEEe
Q 030085          111 TIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSS--IMISSSTVTLLCN  162 (183)
Q Consensus       111 ~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~lvA~~t~T~~~~  162 (183)
                      ++..+++++++.+.                      .+|  +++|+++.|+.+.
T Consensus       234 ~s~~~~~~v~~~~~----------------------~~g~~~l~a~a~~t~v~v  265 (288)
T 2gvh_A          234 SSMSIQTKLWSENL----------------------LTGERHITATGHFTMVAV  265 (288)
T ss_dssp             SEEEEEEEEEEEET----------------------TTCCEEEEEEEEEEEEEE
T ss_pred             CEEEEEEEEEEccC----------------------CCCceEEEEEEEEEEEEE
Confidence            99999999997310                      123  7999999999864

>2gvh_A AGR_L_2016P; 15159470, acyl-COA hydrolase, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.50A {Agrobacterium tumefaciens} SCOP: d.38.1.1 d.38.1.1

Probab=99.66  E-value=3.2e-16  Score=132.50  Aligned_cols=118  Identities=13%  Similarity=0.099  Sum_probs=98.0

Q ss_pred             cCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEE-eEEEecCCCCCCEEEEEE
Q 030085           25 IGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL-TINHLKSAELGDLVRAVA  103 (183)
Q Consensus        25 Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrpa~~Gd~l~a~a  103 (183)
                      --+++.+++++++++++.+.+.++|+.|.+|||.+++++|.++++++....+ ..++|+.+ +|+|++|++.||.|++++
T Consensus        17 ~~~~~~~~~~g~~~~~~~v~~~~~n~~G~v~gg~~~~~~D~a~~~~a~~~~~-~~~vt~~~~~i~f~~p~~~gd~l~v~~   95 (288)
T 2gvh_A           17 ATIEKPAQHGATTRLIDIVFPGDTNHHGTLFGGTGLALMDRVAFIAATRFGR-TPFVTASCERIDFRQPARIGHIVEFTA   95 (288)
T ss_dssp             ----CCCEECCCEEEEEEECTTCHHHHHHHTTHHHHHHHHHHHHHHHHHHHC-SCEEEEEECCEECCCCCSSCEEEEEEE
T ss_pred             EEEEccCCCCcEEEEEEEcCHHHCCCCCcEeHHHHHHHHHHHHHHHHHHhcC-CcEEEEEEeeEEEeCcCCCCCEEEEEE
Confidence            3467888899999999999999999999999999999999998877654333 45788888 599999999999999999


Q ss_pred             EEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEec
Q 030085          104 TPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNL  163 (183)
Q Consensus       104 ~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~  163 (183)
                      +|++.||++..+++++++++.                    .+++++++|.++.|+.+.-
T Consensus        96 ~v~~~G~~s~~~~~~v~~~~~--------------------~~~~~~l~a~a~~t~V~vd  135 (288)
T 2gvh_A           96 RPVKAGRRSLTVEVEMVAETI--------------------IGRQQHTCTRGIFHMVAIP  135 (288)
T ss_dssp             EEEEECSSEEEEEEEEEEEET--------------------TTCCEEEEEEEEEEEEECC
T ss_pred             EEEEECCcEEEEEEEEEEecC--------------------CCCceEEEEEEEEEEEEeC
Confidence            999999999999999997310                    0034589999999998643

>3b7k_A Acyl-coenzyme A thioesterase 12; hotdog fold, structural genomics, structural genomics consor SGC, fatty acid metabolism, hydrolase; HET: COA; 2.70A {Homo sapiens}

Probab=99.60  E-value=1.3e-14  Score=125.76  Aligned_cols=112  Identities=14%  Similarity=0.018  Sum_probs=91.2

Q ss_pred             EeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEE-eEEEecCCCCCCEEEEEEEEEEeCC
Q 030085           32 LTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL-TINHLKSAELGDLVRAVATPINLGK  110 (183)
Q Consensus        32 ~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrpa~~Gd~l~a~a~vi~~Gr  110 (183)
                      ..+++++..+.+.+.++|+.|.+|||.+++++|.++++++.... +..++|+.+ +|+|++|++.||.|+++|+|++.|+
T Consensus       195 ~~~~~~~~~~~v~~~~~n~~G~v~GG~~~~~~D~a~~~~a~~~~-~~~~vtv~~~~i~F~~Pv~~Gd~l~~~a~v~~~g~  273 (333)
T 3b7k_A          195 TRGTSVQSIELVLPPHANHHGNTFGGQIMAWMETVATISASRLC-WAHPFLKSVDMFKFRGPSTVGDRLVFTAIVNNTFQ  273 (333)
T ss_dssp             -CCCCEEEEEECCGGGBCTTCBBCHHHHHHHHHHHHHHHHHTSB-SSCCEEEEECCEECCSCCBTTCEEEEEEEEEEEET
T ss_pred             ccCcEEEEEEEeChHHcCcCCcccHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEeeeEEcCcccCCCEEEEEEEEEEECC
Confidence            45789999999999999999999999999999999877665433 345799998 8999999999999999999999999


Q ss_pred             cEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          111 TIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       111 ~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      ++..++++++.... .               + -..+++++++++..||.+
T Consensus       274 ~s~~v~v~v~~~~~-~---------------~-~~~~~~~~~a~a~~t~V~  307 (333)
T 3b7k_A          274 TCVEVGVRVEAFDC-Q---------------E-WAEGRGRHINSAFLIYNA  307 (333)
T ss_dssp             TEEEEEEEEEEECH-H---------------H-HHHTCCEEEEEEEEEEEC
T ss_pred             CEEEEEEEEEEEec-c---------------C-CCCCcEEEEEEEEEEEEE
Confidence            99998877653100 0               0 000456899999999985

>3bbj_A Putative thioesterase II; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.16A {Thermobifida fusca}

Probab=99.54  E-value=1.2e-13  Score=116.72  Aligned_cols=107  Identities=14%  Similarity=0.068  Sum_probs=89.0

Q ss_pred             CCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCC
Q 030085           18 PDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGD   97 (183)
Q Consensus        18 ~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd   97 (183)
                      ..+|.++|+++  .++++..+.+.+  + ..|+.|.+|||.+++++|.|++..    .+.. . .++|+++||+|+..| 
T Consensus         5 ~~~~~~~l~l~--~~~~~~~~~~~~--~-~~~~~~~~hGG~~~al~~~A~~~~----~~~~-~-~~sl~~~fl~p~~~g-   72 (272)
T 3bbj_A            5 MTRFDSATEVV--RVGENRYAVELD--P-GYLIGTAMNGGYLMTVLQRSALAE----SDHL-H-AVSSSYHFHRPASSG-   72 (272)
T ss_dssp             CCHHHHHTCEE--EEETTEEEEEEC--G-GGBSSSSBCHHHHHHHHHHHHHHT----CSSS-E-EEEEEEEECSCCCSE-
T ss_pred             cchHHHHhCcE--EccCCEEEEEeC--c-cccCCCCccHHHHHHHHHHHHHHh----cCCC-C-EEEEEEEEeCCCCCc-
Confidence            56899999886  678898877766  3 345579999999999999986433    2222 2 378999999999999 


Q ss_pred             EEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085           98 LVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus        98 ~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      .|+++++++|.||++++++++++.                          +|++|++++++|...
T Consensus        73 ~i~~~~~~~r~Gr~~~~~~v~~~q--------------------------~g~~v~~a~a~f~~~  111 (272)
T 3bbj_A           73 PAEIETRVLKRGRTVTTVQTTLFQ--------------------------EGRTILTGTLATATL  111 (272)
T ss_dssp             EEEEEEEEEECCSSCEEEEEEEEE--------------------------TTEEEEEEEEEEECC
T ss_pred             cEEEEEEEEEcCCCEEEEEEEEEE--------------------------CCEEEEEEEEEEEec
Confidence            899999999999999999999995                          489999999999843

>1njk_A Hypothetical protein YBAW; structural genomics, thioesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Escherichia coli} SCOP: d.38.1.1

Probab=99.53  E-value=2.5e-13  Score=104.23  Aligned_cols=112  Identities=12%  Similarity=0.077  Sum_probs=90.2

Q ss_pred             EEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHH-------HHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEE
Q 030085           28 ELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESL-------ASMGAHMASGFKRVAGVQLTINHLKSAELGDLVR  100 (183)
Q Consensus        28 ~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A-------~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~  100 (183)
                      ++....++..+.++++.+..+|++|.+|+|.++.++|.+       .|+.......+...++++++|+|++|++.||.|.
T Consensus        14 ~~~~~~~~~~~~~~~V~~~d~D~~Ghv~n~~y~~~~e~ar~~~~~~~g~~~~~~~~g~~~v~~~~~i~y~~p~~~gd~l~   93 (156)
T 1njk_A           14 RENLYFQGHMQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSDSFQWMTAHNIAFVVVNININYRRPAVLSDLLT   93 (156)
T ss_dssp             --------CEEEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEEEEEEEECSCCCTTCEEE
T ss_pred             cccccCCCceEEEEEECHHHcCCCCcccHHHHHHHHHHHHHHHHHHcCCchHHHhCCceEEEEEEEEEEeCCCCCCCEEE
Confidence            445566778899999999999999999999999999999       4443322223456799999999999999999999


Q ss_pred             EEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEec
Q 030085          101 AVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNL  163 (183)
Q Consensus       101 a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~  163 (183)
                      +++++.+.|++...++.+|++.                        ++|+++|.++.++.+.-
T Consensus        94 v~~~v~~~g~~s~~~~~~i~~~------------------------~~g~~~a~~~~~~v~vd  132 (156)
T 1njk_A           94 ITSQLQQLNGKSGILSQVITLE------------------------PEGQVVADALITFVCID  132 (156)
T ss_dssp             EEEEEEEEETTEEEEEEEEEET------------------------TTTEEEEEEEEEEEEEE
T ss_pred             EEEEEEEeCCeEEEEEEEEEEC------------------------CCCeEEEEEEEEEEEEE
Confidence            9999999999999999999861                        57899999999998643

>2cye_A TTHA1846, putative thioesterase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: COA; 1.90A {Thermus thermophilus} SCOP: d.38.1.1

Probab=99.52  E-value=8.5e-13  Score=97.31  Aligned_cols=101  Identities=13%  Similarity=0.024  Sum_probs=86.3

Q ss_pred             EEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc----CCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCc
Q 030085           36 RIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS----GFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKT  111 (183)
Q Consensus        36 ~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~----~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~  111 (183)
                      ..+.++++.+.++|++|.+|+|.++.++|.+.........    .+...++++++|+|++|++.||.|++++++.+.|++
T Consensus         5 ~~~~~~~V~~~d~D~~G~v~~~~y~~~~~~a~~~~~~~~g~~~~~~~~~v~~~~~i~y~~~~~~gd~l~v~~~v~~~~~~   84 (133)
T 2cye_A            5 PVRVRVDVRFRDLDPLGHVNNAVFLSYMELARIRYFQRISPDWLEEGHFVVARMEVDYLRPILLGDEVFVGVRTVGLGRS   84 (133)
T ss_dssp             SEEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHTTC--CGGGGGGEEEEEEEEEECSCCBTTCEEEEEEEEEEECSS
T ss_pred             ceEEEeecChhhccccccccHHHHHHHHHHHHHHHHHHcCCccccCceEEEEEEEEEEeccccCCCEEEEEEEEEEeCCc
Confidence            3567889999999999999999999999998432221110    234689999999999999999999999999999999


Q ss_pred             EEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085          112 IQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus       112 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      ...++.++++                         + |+++|.++.++.+.
T Consensus        85 s~~~~~~i~~-------------------------~-g~~~a~~~~~~v~~  109 (133)
T 2cye_A           85 SLRMEHLVTA-------------------------N-GESAAKGLGVLVWL  109 (133)
T ss_dssp             EEEEEEEEEE-------------------------T-TEEEEEEEEEEEEE
T ss_pred             EEEEEEEEEE-------------------------C-CEEEEEEEEEEEEE
Confidence            9999999997                         4 89999999999864

>2fuj_A Conserved hypothetical protein; structural genomics, conserved hypot protein, hot DOG domain, acyl-COA thioesterase, hydrolase; 1.70A {Xanthomonas campestris PV} SCOP: d.38.1.1

Probab=99.44  E-value=1.2e-11  Score=91.70  Aligned_cols=105  Identities=8%  Similarity=-0.088  Sum_probs=89.4

Q ss_pred             EEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc-----CCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCC
Q 030085           36 RIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS-----GFKRVAGVQLTINHLKSAELGDLVRAVATPINLGK  110 (183)
Q Consensus        36 ~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~-----~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr  110 (183)
                      ....++++.+.++|++|.+|+|.++.++|.+.........     .+...++++++++|++|+..||.|.+++++.+.|+
T Consensus        10 ~~~~~~~V~~~d~D~~ghv~~~~y~~~~e~a~~~~~~~~g~~~~~~~~~~v~~~~~i~y~~~~~~gd~v~v~~~v~~~~~   89 (137)
T 2fuj_A           10 LARVPISVRWRDMDSMGHVNNAKYISYLEEARVRWMLGVEGVAMTDRIAPVVAATNVNYKRPLVWPNDILVELFVERLGS   89 (137)
T ss_dssp             EEEEEECCCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHSSSCCCCCSSEEEEEEEEEEECSCCCTTCCEEEEEEEEEECS
T ss_pred             eEEEEeeeEehhcCcCCcccHHHHHHHHHHHHHHHHHHhCcccccCCceEEEEEEEeEEeCCccCCCEEEEEEEEEEecC
Confidence            4677899999999999999999999999998764433211     23458899999999999999999999999999999


Q ss_pred             cEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCC-CcEEEEEEEEEEEecC
Q 030085          111 TIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSS-SIMISSSTVTLLCNLP  164 (183)
Q Consensus       111 ~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~lvA~~t~T~~~~~p  164 (183)
                      +...++.++++.                        ++ |+++|.++.++.+.-+
T Consensus        90 ~s~~~~~~i~~~------------------------~~~g~~~a~~~~~~v~vd~  120 (137)
T 2fuj_A           90 SSVTIGHRILDQ------------------------KDEGVLYSDGNVVVVWIDT  120 (137)
T ss_dssp             SEEEEEEEEEES------------------------SCTTCEEEEEEEEEEEESS
T ss_pred             cEEEEEEEEEeC------------------------CCCCeEEEEEEEEEEEEEC
Confidence            999999999971                        45 8999999999986543

>2q78_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE MLC; 2.20A {Thermotoga maritima MSB8} SCOP: d.38.1.7

Probab=99.43  E-value=1.6e-12  Score=103.66  Aligned_cols=101  Identities=7%  Similarity=-0.039  Sum_probs=88.1

Q ss_pred             EEEcCCCC-cCCCCcccHHHHHHHHHHHHHHHHHHhcCC-ceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEE
Q 030085           40 CFRVTQNS-CQPFKVLHGGVSALIAESLASMGAHMASGF-KRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQV  117 (183)
Q Consensus        40 ~m~v~~~~-~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~-~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v  117 (183)
                      +|++++.. ++..+++|||++.+|+|.+++.++....+. ...|+++++|+|++|++.|++|+++|++++.+++..+|++
T Consensus        33 sm~~~~~~~~g~~~VlaTpamvaLmE~aa~~~v~~~L~eg~~tVG~~v~v~Hlapt~~G~~Vta~A~l~~v~gr~l~f~V  112 (153)
T 2q78_A           33 TMVWNEDIEMLDLHLVATSALIGVVHRVSYELLSRYLPNDYTAVVVETLARHVKAVPTGTRVAVGVRVVGVVGNRVKFRG  112 (153)
T ss_dssp             GGBCCSCGGGGGGCBBCHHHHHHHHHHHHHHHHHTTSCTTEEEEEEEEEEEECSCCBSSEEEEEEEEEEEEETTEEEEEE
T ss_pred             ccccchhhccCCCCEeecHHHHHHHHHHHHHHHHhhCCCCceEEEEEEEeEECcCCCCCCEEEEEEEEEEECCCEEEEEE
Confidence            46777766 566799999999999999999998887754 6789999999999999999999999999999999999999


Q ss_pred             EEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCCC
Q 030085          118 RLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPD  167 (183)
Q Consensus       118 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p~  167 (183)
                      +++|                         ++ .+|+.++++-++ +++.+
T Consensus       113 ~A~d-------------------------~~-~~Ig~Gth~R~I-V~~~~  135 (153)
T 2q78_A          113 IVMS-------------------------GD-EKILEAEFVRAI-VPREK  135 (153)
T ss_dssp             EEEE-------------------------TT-EEEEEEEEEEEE-EEHHH
T ss_pred             EEEE-------------------------CC-ceEEEEEEEEEE-EeHHH
Confidence            9998                         43 799999999984 45433

>3kuv_A Fluoroacetyl coenzyme A thioesterase; fluoroacetyl-COA thioesterase FLK, hot DOG folding, thioeste hydrolase; 1.50A {Streptomyces cattleya} PDB: 3kuw_A 3kvu_A* 3p2q_A 3p2r_A 3p2s_A 3kv7_A 3kv8_A 3kvz_A* 3kw1_A* 3kx7_A 3kx8_A 3kvi_A 3p3i_A 3p3f_A

Probab=99.38  E-value=2.1e-12  Score=101.20  Aligned_cols=107  Identities=15%  Similarity=0.094  Sum_probs=90.8

Q ss_pred             EeCC-EEEEEEEcCCCCcCCC------------CcccHHHHHHHHHHHHHHHHHHhcC-CceeEEEEEeEEEecCCCCCC
Q 030085           32 LTPE-RIIGCFRVTQNSCQPF------------KVLHGGVSALIAESLASMGAHMASG-FKRVAGVQLTINHLKSAELGD   97 (183)
Q Consensus        32 ~~~g-~v~~~m~v~~~~~Np~------------G~lHGG~~a~LaD~A~g~a~~~~~~-~~~~vTv~l~i~flrpa~~Gd   97 (183)
                      +.+| ..+.++.+.++++++.            -++++|++.+|++.++..++....+ +...|+++++++|++|++.|+
T Consensus         5 l~~G~~~~~~~~V~~~~ta~~~~~~~~~~~~~~~VlaTpamvalmE~aa~~~~~~~L~~g~~tVG~~v~v~Hlapt~~G~   84 (139)
T 3kuv_A            5 MRVGERFTHDFVVPPHKTVRHLYPESPEFAEFPEVFASGFMVGLMEWACVRAMAPYLEPGEGSLGTAICVTHTAATPPGL   84 (139)
T ss_dssp             -CTTCEEEEEEECCGGGBHHHHCTTCGGGTTCCSCBCHHHHHHHHHHHHHHHTGGGCCTTEEEEEEEEEEECCSCCCTTS
T ss_pred             CCCCcEEEEEEEECHHHhHHHhcCCcccccccCcEEeHHHHHHHHHHHHHHHHHhhCCCCCeEEEEEEEEEEccCCCCCC
Confidence            3444 5788999998876531            3889999999999999888776665 467999999999999999999


Q ss_pred             EEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCC
Q 030085           98 LVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPV  165 (183)
Q Consensus        98 ~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~  165 (183)
                      +|+++|++++.+++..+|++++++                         + +++|+.|+++-++ +++
T Consensus        85 ~V~~~a~l~~v~gr~~~f~v~a~d-------------------------~-~~~I~~G~h~r~i-V~~  125 (139)
T 3kuv_A           85 TVTVTAELRSVEGRRLSWRVSAHD-------------------------G-VDEIGSGTHERAV-IHL  125 (139)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEEC-------------------------S-SSEEEEEEEEEEE-EEH
T ss_pred             EEEEEEEEEEECCCEEEEEEEEEE-------------------------C-CEEEEEEEEEEEE-ECH
Confidence            999999999999999999999997                         4 4699999999995 444

>3ck1_A Putative thioesterase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.74A {Ralstonia eutropha}

Probab=99.38  E-value=2.9e-11  Score=90.93  Aligned_cols=102  Identities=16%  Similarity=0.131  Sum_probs=87.2

Q ss_pred             EEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHH-h---------cCCceeEEEEEeEEEecCCCCCCEEEEEEEEE
Q 030085           37 IIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHM-A---------SGFKRVAGVQLTINHLKSAELGDLVRAVATPI  106 (183)
Q Consensus        37 v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~-~---------~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi  106 (183)
                      ...++++...++|++|.+|++.++.++|.+....... .         ..+...++++++|+|++|+..||.|++++++.
T Consensus         6 ~~~~~~V~~~d~D~~ghv~~~~y~~~~e~a~~~~~~~~~g~~~~~~~~~~~~~~vv~~~~i~y~~~~~~gd~v~v~~~v~   85 (150)
T 3ck1_A            6 FRNTVLVRFKHCDAAGIVFYPRYFEMLNDFIEDWFAQALDWPFDAMHGAGQAGVPTADLHCRFVAPSRLGETLTRELRVV   85 (150)
T ss_dssp             EEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHHTSSCCHHHHHTTTCEECCEEEEEEEECSCCBTTCEEEEEEEEE
T ss_pred             eEEEEEECccccCCCceEcHHHHHHHHHHHHHHHHHHHcCCCHHHHHhhcCceeEEEEEEEEEeCCCcCCCEEEEEEEEE
Confidence            5678899999999999999999999999985433332 1         11335689999999999999999999999999


Q ss_pred             EeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEec
Q 030085          107 NLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNL  163 (183)
Q Consensus       107 ~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~  163 (183)
                      +.|++...++.++++                         ++|+++|.++.++.+.-
T Consensus        86 ~~~~~s~~~~~~i~~-------------------------~~g~~~a~~~~~~v~vd  117 (150)
T 3ck1_A           86 KLGQSSFTVQVRFMG-------------------------PDSGLRLEVTQRLVCVD  117 (150)
T ss_dssp             EECSSEEEEEEEEEC-------------------------TTSCEEEEEEEEEECEE
T ss_pred             EEcCcEEEEEEEEEe-------------------------CCCEEEEEEEEEEEEEe
Confidence            999999999999997                         56899999999998643

>2egj_A Hypothetical protein AQ_1494; structural genomics; 1.80A {Aquifex aeolicus} PDB: 2egi_A 2egr_A

Probab=99.38  E-value=4.8e-11  Score=86.66  Aligned_cols=99  Identities=11%  Similarity=-0.051  Sum_probs=84.7

Q ss_pred             EEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc--------CCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeC
Q 030085           38 IGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS--------GFKRVAGVQLTINHLKSAELGDLVRAVATPINLG  109 (183)
Q Consensus        38 ~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~--------~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~G  109 (183)
                      ...+++...++|+.|.+|+|.++.++|.+.........        .+...++++++++|++|++.||.|++++++.+.|
T Consensus         4 ~~~~~V~~~d~D~~g~v~~~~y~~~~~~a~~~~~~~~g~~~~~~~~~g~~~v~~~~~i~y~~~~~~gd~v~v~~~v~~~~   83 (128)
T 2egj_A            4 IYRRRVQFYETDAQGIVHHSNYFRYFEEARGEFLRSKGFPYSKMRDMGLEVVLLNAYCEYKKPLFYDDVFEVHLNLEELS   83 (128)
T ss_dssp             EEEEECCGGGBCTTSSBCTHHHHHHHHHHHHHHHHHTTCCHHHHHHTTEEEEEEEEEEEECSCCCTTCEEEEEEEEEEEC
T ss_pred             EEEEEeeehhcCCCCeEchHHHHHHHHHHHHHHHHHcCCCHHHHHhCCCeeEEEEEEEEEcCCCcCCCEEEEEEEEEEeC
Confidence            45788999999999999999999999998643332211        2234789999999999999999999999999999


Q ss_pred             CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085          110 KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus       110 r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      ++...++.++++                          +|+++|.++.++.+.
T Consensus        84 ~~~~~~~~~i~~--------------------------~g~~~a~~~~~~v~~  110 (128)
T 2egj_A           84 RFTFTFSYIVFK--------------------------EDIAVAKANTKHCMV  110 (128)
T ss_dssp             SSEEEEEEEEEE--------------------------TTEEEEEEEEEEEEE
T ss_pred             CcEEEEEEEEEE--------------------------CCEEEEEEEEEEEEE
Confidence            999999999996                          479999999999865

>2oiw_A Putative 4-hydroxybenzoyl-COA thioesterase; structural genomics, protein structure initiative, midwest center for structu genomics; 2.00A {Geobacillus stearothermophilus} SCOP: d.38.1.1

Probab=99.38  E-value=1.6e-11  Score=90.91  Aligned_cols=102  Identities=6%  Similarity=-0.030  Sum_probs=86.4

Q ss_pred             EEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHh-----cCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCc
Q 030085           37 IIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMA-----SGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKT  111 (183)
Q Consensus        37 v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~-----~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~  111 (183)
                      ....+++.+.++|++|.+|+|.++.++|.+........     ..+...++++++|+|++|++.||.|.+++++.+.|++
T Consensus         5 ~~~~~~V~~~d~D~~g~v~~~~y~~~~~~a~~~~~~~g~~~~~~~~~~~v~~~~~i~y~~~~~~gd~v~v~~~v~~~~~~   84 (136)
T 2oiw_A            5 FTTVITPRVSETDGVGHINNTTVPVWFEAGRHEIFKLFTPDLSFKRWRMVIIRMEVDYVNQMYYGQDVTVYTGIERIGNT   84 (136)
T ss_dssp             EEEEECCCGGGBCTTSSBCGGGHHHHHHHHTHHHHHHHSTTCCGGGCCEEEEEEEEEECSCCCTTSCEEEEEEEEEECSS
T ss_pred             EEEEEecCHHHcCCCceEChHHHHHHHHHHHHHHHHccCchhccCCceEEEEEEEEEEcccCCCCCEEEEEEEEEecCCc
Confidence            45678899999999999999999999999865433210     1123579999999999999999999999999999999


Q ss_pred             EEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecC
Q 030085          112 IQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLP  164 (183)
Q Consensus       112 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p  164 (183)
                      ...++.++++                          +|+++|.++.++.+.-+
T Consensus        85 s~~~~~~i~~--------------------------~g~~~a~~~~~~v~vd~  111 (136)
T 2oiw_A           85 SLTIYEEIHQ--------------------------NGVVCAKGRSVYVNFNF  111 (136)
T ss_dssp             EEEEEEEEEE--------------------------TTEEEEEEEEEEEEEET
T ss_pred             EEEEEEEEEE--------------------------CCEEEEEEEEEEEEEEC
Confidence            9999999997                          37899999999986543

>1s5u_A Protein YBGC; structural genomics, hypothetical protein, thioesterase fold, PSI, protein structure initiative; 1.70A {Escherichia coli} SCOP: d.38.1.1

Probab=99.38  E-value=5.7e-11  Score=87.71  Aligned_cols=103  Identities=14%  Similarity=0.088  Sum_probs=87.1

Q ss_pred             EEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc--------CCceeEEEEEeEEEecCCCCCCEEEEEEEEEE
Q 030085           36 RIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS--------GFKRVAGVQLTINHLKSAELGDLVRAVATPIN  107 (183)
Q Consensus        36 ~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~--------~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~  107 (183)
                      .....+++.+.++|+.|.+|+|.++.++|.+.........        .+...++++++|+|++|++.||.|.+++++.+
T Consensus         7 ~~~~~~~V~~~d~D~~g~v~~~~y~~~~~~a~~~~~~~~g~~~~~~~~~g~~~v~~~~~i~y~~~~~~gd~v~v~~~v~~   86 (138)
T 1s5u_A            7 LFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHFSQQALMAERVAFVVRKMTVEYYAPARLDDMLEIQTEITS   86 (138)
T ss_dssp             CEEEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHTTCCHHHHHHTTCEEEEEEEEEEECSCCCTTCEEEEEEEEEE
T ss_pred             eeEEEEEechhhcCCCceEeHHHHHHHHHHHHHHHHHHcCCCHHHHHhCCCEEEEEEEEEEECCcccCCCEEEEEEEEEE
Confidence            3567889999999999999999999999998643332211        13457899999999999999999999999999


Q ss_pred             eCCcEEEEEEEE-EEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecC
Q 030085          108 LGKTIQVWQVRL-WKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLP  164 (183)
Q Consensus       108 ~Gr~~~~~~v~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p  164 (183)
                      .|++...++.++ ++                          +|+++|.++.++.+.-+
T Consensus        87 ~~~~s~~~~~~i~~~--------------------------~g~~~a~~~~~~v~vd~  118 (138)
T 1s5u_A           87 MRGTSLVFTQRIVNA--------------------------ENTLLNEAEVLVVCVDP  118 (138)
T ss_dssp             ECSSEEEEEEEEECT--------------------------TCCEEEEEEEEEEEEET
T ss_pred             eCCeEEEEEEEEEec--------------------------CCEEEEEEEEEEEEEeC
Confidence            999999999999 74                          57999999999986543

>2hlj_A Hypothetical protein; putative thioesterase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.00A {Pseudomonas putida} SCOP: d.38.1.1

Probab=99.32  E-value=1.1e-10  Score=88.33  Aligned_cols=103  Identities=15%  Similarity=0.026  Sum_probs=87.6

Q ss_pred             EEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc--------CCceeEEEEEeEEEecCCCCCCEEEEEEEEEEe
Q 030085           37 IIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS--------GFKRVAGVQLTINHLKSAELGDLVRAVATPINL  108 (183)
Q Consensus        37 v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~--------~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~  108 (183)
                      ...++++...+++++|.+|++.++.++|.+.........        .+...++++++|+|++|+..||.|.+++++.+.
T Consensus         6 ~~~~~~V~~~d~D~~ghv~~~~y~~~~e~a~~~~~~~~g~~~~~~~~~~~~~v~~~~~i~y~~~~~~gd~v~v~~~v~~~   85 (157)
T 2hlj_A            6 ITYRTTVQEDWVDYNGHLRDAFYLLIFSYATDALMDRIGLDADSRGQSGNSLFTLEAHINYLHEVKLGTEVWVQTQILGF   85 (157)
T ss_dssp             EEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHHHTTTTTSTTTTTTTEEEEEEEEEECSCCBTTCEEEEEEEEEEE
T ss_pred             cccceecCHHHcCCCCcccHHHHHHHHHHHHHHHHHHcCCCHHHHHhcCCceEEEEEEEEEecccCCCCEEEEEEEEEEe
Confidence            466788999999999999999999999998764443211        123578999999999999999999999999999


Q ss_pred             CCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEec
Q 030085          109 GKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNL  163 (183)
Q Consensus       109 Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~  163 (183)
                      |++...++.++++.                        ++|+++|.++.++.+.-
T Consensus        86 ~~~s~~~~~~i~~~------------------------~~g~~~a~~~~~~v~vd  116 (157)
T 2hlj_A           86 DRKRLHVYHSLHRA------------------------GFDEVLAASEQMLLHVD  116 (157)
T ss_dssp             CSSEEEEEEEEEET------------------------TEEEEEEEEEEEEEEBC
T ss_pred             CCcEEEEEEEEEEC------------------------CCCcEEEEEEEEEEEEE
Confidence            99999999999981                        26899999999998643

>1z54_A Probable thioesterase; hypothetical protein, structural genom NPPSFA, riken structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: d.38.1.1

Probab=99.32  E-value=1.1e-10  Score=85.61  Aligned_cols=99  Identities=16%  Similarity=0.207  Sum_probs=84.6

Q ss_pred             EEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHh--------cCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeC
Q 030085           38 IGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMA--------SGFKRVAGVQLTINHLKSAELGDLVRAVATPINLG  109 (183)
Q Consensus        38 ~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~--------~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~G  109 (183)
                      ...+++...++|+.|.+|+|.++.++|.+........        ..+...++++++|+|++|+..||.|.+++++.+.|
T Consensus         4 ~~~~~V~~~d~D~~g~v~~~~y~~~~~~a~~~~~~~~g~~~~~~~~~~~~~v~~~~~i~y~~~~~~gd~v~v~~~v~~~~   83 (132)
T 1z54_A            4 VTRIKVRYAETDQMGVVHHSVYAVYLEAARVDFLERAGLPYHRVEARGVFFPVVELGLTFRAPARFGEVVEVRTRLAELS   83 (132)
T ss_dssp             EEEEECCGGGBCTTSSBCTTHHHHHHHHHHHHHHHHTTCCHHHHHTTTEECCEEEEEEEECSCCCTTCEEEEEEEEEEEC
T ss_pred             eEEEEechhhcCCCCEEehHHHHHHHHHHHHHHHHHcCCCHHHHHhCCcEEEEEEEEEEEeccCCCCCEEEEEEEEEEeC
Confidence            4678899999999999999999999999864433221        12235689999999999999999999999999999


Q ss_pred             CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085          110 KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus       110 r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      ++...++.++++                          +|+++|.++.++.+.
T Consensus        84 ~~~~~~~~~i~~--------------------------~~~~~a~~~~~~v~v  110 (132)
T 1z54_A           84 SRALLFRYRVER--------------------------EGVLLAEGFTRHLCQ  110 (132)
T ss_dssp             SSEEEEEEEEEE--------------------------TTEEEEEEEEEEECE
T ss_pred             CeEEEEEEEEEE--------------------------CCEEEEEEEEEEEEE
Confidence            999999999997                          368999999999865

>2o5u_A Thioesterase; putative thioesterese,, hydrolase; 1.91A {Pseudomonas aeruginosa} SCOP: d.38.1.1 PDB: 2av9_A 2o6t_A 2o6b_A 2o6u_A

Probab=99.30  E-value=1.7e-10  Score=87.03  Aligned_cols=104  Identities=5%  Similarity=-0.061  Sum_probs=87.7

Q ss_pred             EEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHh-c-----CCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCC
Q 030085           37 IIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMA-S-----GFKRVAGVQLTINHLKSAELGDLVRAVATPINLGK  110 (183)
Q Consensus        37 v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~-~-----~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr  110 (183)
                      ....+++...++|+.|.+|++.++.++|.+........ .     .+...++++++|+|++|+..||.|.+++++.+.|+
T Consensus        15 ~~~~~~Vr~~d~D~~ghv~~~~y~~~~~~a~~~~~~~~g~~~~~~~~~~~vv~~~~i~y~~~~~~gd~v~v~t~v~~~~~   94 (148)
T 2o5u_A           15 HFQPISTRWHDNDIYGHVNNVTYYAFFDTAVNTYLIERGGLDIQGGEVIGLVVSSSCDYFAPVAFPQRIEMGLRVARLGN   94 (148)
T ss_dssp             EEEEECCCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHHHCCCTTTCSEEEEEEEEEEEECSCCCTTSCEEEEEEEEEECS
T ss_pred             eEEEEEeeEEccCCCCcCchhHHHHHHHHHHHHHHHHhCCcccccCCceeEEEEEEEEEcCcccCCCEEEEEEEEEEeCC
Confidence            45678899999999999999999999999875333221 1     12357899999999999999999999999999999


Q ss_pred             cEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecC
Q 030085          111 TIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLP  164 (183)
Q Consensus       111 ~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p  164 (183)
                      +...++.++++.                        ++|+++|.++.++.+.-+
T Consensus        95 ~s~~~~~~i~~~------------------------~~g~~~a~~~~~~v~vd~  124 (148)
T 2o5u_A           95 SSVQYELALFLE------------------------GQREACAAGRFVHVFVER  124 (148)
T ss_dssp             SEEEEEEEEEES------------------------SCCBCSEEEEEEEEEEET
T ss_pred             cEEEEEEEEEEC------------------------CCceEEEEEEEEEEEEEC
Confidence            999999999971                        568999999999986543

>2pzh_A Hypothetical protein HP_0496; lipid, acyl-COA, bacterial membrane, TOL-PAL system, thioest hot-DOG fold, hydrolase; 1.70A {Helicobacter pylori}

Probab=99.29  E-value=1.6e-10  Score=85.24  Aligned_cols=108  Identities=12%  Similarity=-0.007  Sum_probs=85.3

Q ss_pred             EEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc-C----CceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEE
Q 030085           39 GCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS-G----FKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQ  113 (183)
Q Consensus        39 ~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~-~----~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~  113 (183)
                      ..+.+.+..+|++|.+|++.++.++|.+......... +    +...++++++|+|++|+..||.|.+++++.+.|++..
T Consensus         3 ~~~~V~~~d~D~~g~v~~~~y~~~~~~a~~~~~~~~g~~~~~~~~~~vv~~~~i~y~~~~~~gd~v~v~~~v~~~~~~s~   82 (135)
T 2pzh_A            3 MRCRVYYEDTDSEGVVYHANYLKYCERARSEFFFKQNVLPENEEGVFVIRSIKADFFTPASLGQVLEIRTQIKELRKVFV   82 (135)
T ss_dssp             EEEECCGGGBCTTSBBCTTHHHHHHHHHHHHHHHTTTCCSEETTEEEEEEEEEEEECSCCBTTCEEEEEEEEEEECSSEE
T ss_pred             EEEEEeehHcCCCceecHHHHHHHHHHHHHHHHHHcCCChHHcCceEEEEEEEEEEccccccCCEEEEEEEEEEecceEE
Confidence            4678899999999999999999999998643332211 1    2257889999999999999999999999999999999


Q ss_pred             EEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEec
Q 030085          114 VWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNL  163 (183)
Q Consensus       114 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~  163 (183)
                      .++.+|++...                 ..+.+.+|+++|.+..++.+.-
T Consensus        83 ~~~~~i~~~~~-----------------~~~~~~~g~~~a~~~~~~v~vd  115 (135)
T 2pzh_A           83 VLFQEIYCIQN-----------------ASLEPMKPFKVFASEIKFGFVN  115 (135)
T ss_dssp             EEEEEEEEEEC-----------------TTCCCCCCEEEEEEEEEEEEEC
T ss_pred             EEEEEEEeCCC-----------------ccccccCceEEEEEEEEEEEEE
Confidence            99999997210                 0000123789999999998654

>2gf6_A Conserved hypothetical protein; putative thioesterase, structural genomics, joint center for structural genomics, JCSG; HET: COA; 1.91A {Sulfolobus solfataricus} SCOP: d.38.1.1

Probab=99.28  E-value=5.3e-10  Score=82.17  Aligned_cols=102  Identities=10%  Similarity=0.006  Sum_probs=85.1

Q ss_pred             EEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHH-h-cCC------ceeEEEEEeEEEecCCCCCCEEEEEEEEEEe
Q 030085           37 IIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHM-A-SGF------KRVAGVQLTINHLKSAELGDLVRAVATPINL  108 (183)
Q Consensus        37 v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~-~-~~~------~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~  108 (183)
                      ...++++...++|++|.+|+|.++.++|.+....... . .+.      ...++++++|+|++|+..||.|.+++++.+.
T Consensus         7 ~~~~~~V~~~d~D~~ghv~~~~y~~~~~~a~~~~~~~~~g~~~~~~~~~~~~vv~~~~i~y~~~~~~gd~v~v~~~v~~~   86 (135)
T 2gf6_A            7 YVFEDVVRIYDTDAQGIAHYAAYYRFFTNTIEKFIKEKVGIPYPIVNENLWFVIAESHAIYHRPVKLGDKLTVLLNPKIL   86 (135)
T ss_dssp             GEEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHHHCSCSSEEETTEEEEEEEEEEEECSCCCTTCEEEEEEEEEEC
T ss_pred             eEEEEEEeEcccCCCceEecchHHHHHHHHHHHHHHHhcCCCHHHHhccccEEEEEEEEEECCCCcCCCEEEEEEEEEEe
Confidence            3467889999999999999999999999986433322 1 111      2378899999999999999999999999999


Q ss_pred             CCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecC
Q 030085          109 GKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLP  164 (183)
Q Consensus       109 Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p  164 (183)
                      |++...++.+++.                          +|+++|.++.++.+.-+
T Consensus        87 ~~~s~~~~~~i~~--------------------------~g~~~a~~~~~~v~vd~  116 (135)
T 2gf6_A           87 SNKTIKFEFKVLK--------------------------DGELTTEGYVIQIAINP  116 (135)
T ss_dssp             SSSEEEEEEEEEE--------------------------TTEEEEEEEEEEEEEET
T ss_pred             CCcEEEEEEEEEE--------------------------CCEEEEEEEEEEEEEec
Confidence            9999999999985                          47999999999986543

>2ali_A Hypothetical protein PA2801; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.75A {Pseudomonas aeruginosa} SCOP: d.38.1.1 PDB: 3qy3_A

Probab=99.28  E-value=1.6e-10  Score=89.35  Aligned_cols=105  Identities=11%  Similarity=-0.042  Sum_probs=89.4

Q ss_pred             CEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc-----CCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeC
Q 030085           35 ERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS-----GFKRVAGVQLTINHLKSAELGDLVRAVATPINLG  109 (183)
Q Consensus        35 g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~-----~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~G  109 (183)
                      +..+.++++....+|+.|.+|++.++.++|.+.........     .+...++++++|+|++|++.||.|++++++.+.|
T Consensus        28 ~~~~~~~~Vr~~D~D~~Ghvnn~~yl~~~e~a~~~~~~~~g~~~~~~g~~~vv~~~~i~y~~p~~~gd~v~v~t~v~~~~  107 (158)
T 2ali_A           28 LLHTAHIPVRWGDMDSYGHVNNTLYFQYLEEARVAWFETLGIDLEGAAEGPVVLQSLHTYLKPVVHPATVVVELYAGRLG  107 (158)
T ss_dssp             EEEEEEEECCGGGBCTTSSBCTTHHHHHHHHHHHHHHHHTTCCCSSCSEEEEEEEEEEEECSCCCSSCEEEEEEEEEEEC
T ss_pred             ceEEEEeEEehHHcCcCCeecHHHHHHHHHHHHHHHHHHhCcccccCCceEEEEEEEeEEeccccCCCEEEEEEEEEEec
Confidence            35778899999999999999999999999998754433211     2345789999999999999999999999999999


Q ss_pred             CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCC-CcEEEEEEEEEEEec
Q 030085          110 KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSS-SIMISSSTVTLLCNL  163 (183)
Q Consensus       110 r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~lvA~~t~T~~~~~  163 (183)
                      ++...++.+|++.                        ++ |+++|.++.++.+.-
T Consensus       108 ~~s~~~~~~i~~~------------------------~~~g~~~a~a~~~~v~vd  138 (158)
T 2ali_A          108 TSSLVLEHRLHTL------------------------EDPQGTYGEGHCKLVWVR  138 (158)
T ss_dssp             SSEEEEEEEEEES------------------------SCTTSCCEEEEEEEEEEE
T ss_pred             CcEEEEEEEEEEC------------------------CCCCEEEEEEEEEEEEEE
Confidence            9999999999981                        35 899999999998643

>1lo7_A 4-hydroxybenzoyl-COA thioesterase; hot DOG fold, catalytic mechanism, hydrolase; HET: 4CO; 1.50A {Pseudomonas SP} SCOP: d.38.1.1 PDB: 1bvq_A* 1lo8_A* 1lo9_A*

Probab=99.24  E-value=5.2e-10  Score=82.76  Aligned_cols=106  Identities=8%  Similarity=0.024  Sum_probs=85.9

Q ss_pred             EEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHh---------c--CCceeEEEEEeEEEecCCCCCCEEEEEEE
Q 030085           36 RIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMA---------S--GFKRVAGVQLTINHLKSAELGDLVRAVAT  104 (183)
Q Consensus        36 ~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~---------~--~~~~~vTv~l~i~flrpa~~Gd~l~a~a~  104 (183)
                      .....+.+...++|++|.+|++.++.++|.+..-.....         .  .+...++++++++|++|++.||.|.++++
T Consensus         4 ~~~~~~~V~~~d~D~~G~v~~~~y~~~~e~a~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~i~y~~p~~~gd~v~v~~~   83 (141)
T 1lo7_A            4 SITMQQRIEFGDCDPAGIVWYPNYHRWLDAASRNYFIKCGLPPWRQTVVERGIVGTPIVSCNASFVCTASYDDVLTIETC   83 (141)
T ss_dssp             EEEEEEECCGGGBCTTSSBCTHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHCEEECCEEEEEEEECSCCCTTCEEEEEEE
T ss_pred             ceEEEEEeeEcCcCCcceEchhHHHHHHHHHHHHHHHHhCCCHHHHhhhhccceeEEEEEEEEEEcCCCCCCCEEEEEEE
Confidence            356678999999999999999999999999843222111         0  12246889999999999999999999999


Q ss_pred             EEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCC-cEEEEEEEEEEEec
Q 030085          105 PINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSS-IMISSSTVTLLCNL  163 (183)
Q Consensus       105 vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~lvA~~t~T~~~~~  163 (183)
                      +.+.|++...++.++++..                      +.+| +++|.+..++.+.-
T Consensus        84 v~~~~~~s~~~~~~i~~~~----------------------~~~g~~~~a~~~~~~v~vd  121 (141)
T 1lo7_A           84 IKEWRRKSFVQRHSVSRTT----------------------PGGDVQLVMRADEIRVFAM  121 (141)
T ss_dssp             EEEECSSEEEEEEEEEEEC----------------------TTSCEEEEEEEEEEEEEEE
T ss_pred             EEEEcceEEEEEEEEEECC----------------------CCCCcEEEEEEEEEEEEEe
Confidence            9999999999999999720                      0168 99999999998654

>2nuj_A Thioesterase superfamily; YP_509914.1, structural genomics, protein structure initiative, joint center for structural G JCSG, hydrolase; 2.00A {Jannaschia} SCOP: d.38.1.1

Probab=99.24  E-value=1.1e-09  Score=84.41  Aligned_cols=105  Identities=12%  Similarity=-0.016  Sum_probs=88.7

Q ss_pred             CCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc------CCceeEEEEEeEEEecCCCCCCEEEEEEEEEE
Q 030085           34 PERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS------GFKRVAGVQLTINHLKSAELGDLVRAVATPIN  107 (183)
Q Consensus        34 ~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~------~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~  107 (183)
                      +......+.+...++|++|.+|++.++.++|.+.........      .+...++++++|+|++|++.||.|.++.++.+
T Consensus        24 ~~~~~~~~~Vr~~d~D~~Ghv~~~~y~~~~e~a~~~~~~~~g~~~~~~~~~~~v~~~~~i~y~~~~~~gd~i~v~t~v~~  103 (163)
T 2nuj_A           24 PWTFGLADRVRFGELDAIGHVNHTAYLRWYESFRLPFLKARHVTDYGPTSPRLVLKQVHCTYLAEMGMGEDYVITGRVSN  103 (163)
T ss_dssp             TCCEEEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHTTSCCCSSSSCEEEEEEEEEEECSCCCTTCEEEEEEEEEE
T ss_pred             cceEEEEeecchhhcCcCCeEchHHHHHHHHHHHHHHHHHcCCcchhccCceEEEEEEEEEEecCccCCCEEEEEEEEEE
Confidence            345677889999999999999999999999998753333211      12357899999999999999999999999999


Q ss_pred             eCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEE--EEEEec
Q 030085          108 LGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTV--TLLCNL  163 (183)
Q Consensus       108 ~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~--T~~~~~  163 (183)
                      .|++...++.++++                         ++|+++|.++.  ++.+.-
T Consensus       104 ~~~~s~~~~~~i~~-------------------------~~g~~~a~~~~~~~~v~vd  136 (163)
T 2nuj_A          104 FRTTSFTMEFACWR-------------------------LGDAVECTSEGSAVVVLLN  136 (163)
T ss_dssp             ECSSEEEEEEEEEE-------------------------CSSSCEEEEEEEEEEEEEC
T ss_pred             eCCcEEEEEEEEEe-------------------------CCCEEEEEEEEeeEEEEEE
Confidence            99999999999997                         56889999999  988643

>2w3x_A CALE7; hydrolase, hotdog fold, thioesterase, enediyne biosynthesis; HET: JEF; 1.75A {Micromonospora echinospora}

Probab=99.22  E-value=1.1e-09  Score=81.89  Aligned_cols=104  Identities=6%  Similarity=-0.089  Sum_probs=86.5

Q ss_pred             EEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHh--------cCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEe
Q 030085           37 IIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMA--------SGFKRVAGVQLTINHLKSAELGDLVRAVATPINL  108 (183)
Q Consensus        37 v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~--------~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~  108 (183)
                      ...++.+...++|+.|.+|++.++.++|.+........        ..+...++++++|+|++|+..||.|++++++.+.
T Consensus         7 ~~~~~~V~~~d~D~~g~v~~~~y~~~~e~a~~~~~~~~g~~~~~~~~~~~~~vv~~~~i~y~~~~~~gd~v~v~t~v~~~   86 (147)
T 2w3x_A            7 YEYRHVVGFEETNLVGNVYYVNYLRWQGRCREMFLYEHAPEILDELRADLKLFTLKAECEFFAELAPFDRLAVRMRLVEL   86 (147)
T ss_dssp             EEEEEECCGGGBCTTSSBCTHHHHHHHHHHHHHHHHHHCTHHHHHHTTTEEEEEEEEEEEECSCCCTTCEEEEEEEEEEE
T ss_pred             eEEEEEECHHhcCCCceEchHHHHHHHHHHHHHHHHHhCCCHHHHhhCCeEEEEEEEEEEEcCCCCCCCEEEEEEEEEEe
Confidence            45678999999999999999999999999864222111        1234578999999999999999999999999999


Q ss_pred             CCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEec
Q 030085          109 GKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNL  163 (183)
Q Consensus       109 Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~  163 (183)
                      |++...++.++++.                       +++|+++|.++.++.+.-
T Consensus        87 ~~~s~~~~~~i~~~-----------------------~~~g~~~a~~~~~~v~vd  118 (147)
T 2w3x_A           87 TQTQMELGFDYLRL-----------------------GGDDLLVARGRQRIACMR  118 (147)
T ss_dssp             CSSEEEEEEEEEEE-----------------------SSSEEEEEEEEEEEEEEE
T ss_pred             cCcEEEEEEEEEEc-----------------------CCCCEEEEEEEEEEEEEE
Confidence            99999999999971                       025799999999998653

>2oaf_A Thioesterase superfamily; YP_508616.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; HET: CIT PGE; 2.00A {Jannaschia SP} SCOP: d.38.1.1

Probab=99.20  E-value=2.6e-10  Score=86.48  Aligned_cols=102  Identities=15%  Similarity=0.126  Sum_probs=85.9

Q ss_pred             EEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHH---------h--cCCceeEEEEEeEEEecCCCCCCEEEEEEE
Q 030085           36 RIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHM---------A--SGFKRVAGVQLTINHLKSAELGDLVRAVAT  104 (183)
Q Consensus        36 ~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~---------~--~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~  104 (183)
                      ..+..+++...++|+.|.+|++.++.++|.+.......         .  ..+...++++++|+|++|++.||.|.++.+
T Consensus        16 ~~~~~~~Vr~~d~D~~Ghv~~~~yl~~~e~a~~~~~~~~~~G~~~~~l~~~~~~~~vv~~~~i~y~~~~~~gd~v~v~t~   95 (151)
T 2oaf_A           16 AFVHDVRVTWGDCDPAKIAYTGHLPRFALEAIDAWWSEYHGPGGWYHLELDTNVGTPFVRLEMDFKSPVTPRHILKCHTW   95 (151)
T ss_dssp             CEEEEECCCGGGBCTTSSBCGGGHHHHHHHHHHHHHHHHTCTTHHHHHHHTTCEECCEEEEEEEECSCCCTTSCEEEEEE
T ss_pred             ceEEEEEEeehhcCCCCeEchhHHHHHHHHHHHHHHHhhccCCCHHHHhhccCceEEEEEEEEEECCCCcCCCEEEEEEE
Confidence            46678899999999999999999999999984322111         1  123457899999999999999999999999


Q ss_pred             EEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEec
Q 030085          105 PINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNL  163 (183)
Q Consensus       105 vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~  163 (183)
                      +.+.|++...++.++++                          +|+++|.++.++.+.-
T Consensus        96 v~~~~~~s~~~~~~i~~--------------------------~g~~~a~~~~~~v~vd  128 (151)
T 2oaf_A           96 PTRLGTKSITFRVDGVQ--------------------------DGVTCFVGAFTCVFTI  128 (151)
T ss_dssp             EEEECSSEEEEEEEEEE--------------------------TTEEEEEEEEEEEEEE
T ss_pred             EEEeCCcEEEEEEEEEE--------------------------CCEEEEEEEEEEEEEc
Confidence            99999999999999986                          3799999999998643

>2xem_A DYNE7, TEBC; biosynthetic protein, polyketide biosynthesis, enediyne anti agent, thioesterase; HET: SSV; 2.10A {Micromonospora chersina} PDB: 2xfl_A

Probab=99.16  E-value=1.1e-09  Score=83.19  Aligned_cols=107  Identities=10%  Similarity=-0.030  Sum_probs=88.5

Q ss_pred             CCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHH-------h-cCCceeEEEEEeEEEecCCCCCCEEEEEEEE
Q 030085           34 PERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHM-------A-SGFKRVAGVQLTINHLKSAELGDLVRAVATP  105 (183)
Q Consensus        34 ~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~-------~-~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~v  105 (183)
                      |+..+..+.+....+|++|.++++.++.++|.+.......       . ..+...++++++|+|++|+..||.|.++.++
T Consensus         8 ~~~~~~~~~V~~~d~D~~Ghv~~~~yl~~~e~ar~~~~~~~g~~~~~~~~~g~~~vv~~~~i~y~~~~~~gd~v~v~t~v   87 (150)
T 2xem_A            8 PDSYVHRHVVTFDETNLVGNVYFAHYLHWQGHCREHFLADHAPGVMAALADGLALVTVDCHADFYAEGSAFDEVEVRMML   87 (150)
T ss_dssp             CSSEEEEEECCGGGBCTTSSBCTTHHHHHHHHHHHHHHHHHCHHHHHHTTTTEEEEEEEEEEEECSCCCTTCEEEEEEEE
T ss_pred             CCcceEEEEecHHhcCCCceechHHHHHHHHHHHHHHHHHhCCCHHHHhhCCcEEEEEEEEEEECCCCCCCCEEEEEEEE
Confidence            5667889999999999999999999999999974322111       1 1234578999999999999999999999999


Q ss_pred             EEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085          106 INLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus       106 i~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      .+.|++...++.+|++..                      +++|+++|.++.++.+.
T Consensus        88 ~~~~~~s~~~~~~i~~~~----------------------~~~g~~~a~~~~~~v~v  122 (150)
T 2xem_A           88 DRLDGHRIAMSFDYVRVA----------------------PGPPTLLAQGRQTVACM  122 (150)
T ss_dssp             EEEETTEEEEEEEEEEEE----------------------SSSCEEEEEEEEEEEEE
T ss_pred             EeeCCcEEEEEEEEEecC----------------------CCCCeEEEEEEEEEEEE
Confidence            999999999999999720                      03689999999999864

>2hx5_A Hypothetical protein; thioesterase/thiol ester dehydrase-isomerase fold, structura genomics, joint center for structural genomics, JCSG; 1.50A {Prochlorococcus marinus} SCOP: d.38.1.1

Probab=99.16  E-value=1.9e-09  Score=81.73  Aligned_cols=101  Identities=9%  Similarity=-0.046  Sum_probs=84.5

Q ss_pred             EEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHh-c-------C--------CceeEEEEEeEEEecCCCCCCEEE
Q 030085           37 IIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMA-S-------G--------FKRVAGVQLTINHLKSAELGDLVR  100 (183)
Q Consensus        37 v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~-~-------~--------~~~~vTv~l~i~flrpa~~Gd~l~  100 (183)
                      ....+++...++|+.|.+|++.++.++|.+........ .       .        +...++++++|+|++|+..||.|.
T Consensus         8 ~~~~~~V~~~d~D~~Ghv~~~~yl~~~e~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~vv~~~~i~y~~p~~~gd~i~   87 (152)
T 2hx5_A            8 LLLRRVVRFGDTDAAGVMHFHQLFRWCHESWEESLESYGLNPADIFPGSRKSEVTPEVALPIIHCQADFRRPIHTGDALA   87 (152)
T ss_dssp             HEEEEECCGGGBCTTSSBCTTHHHHHHHHHHHHHHHHHTCCHHHHCTTCTTCSSCCSEECCEEEEEEEECSCCCTTCEEE
T ss_pred             EEEEEEeCccccCCCCeEecHHHHHHHHHHHHHHHHHcCCCHHHHhhhhcccccCCceEEEEEEEEEEEcCCCCCCCEEE
Confidence            35678899999999999999999999999853222111 0       1        334689999999999999999999


Q ss_pred             EEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEec
Q 030085          101 AVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNL  163 (183)
Q Consensus       101 a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~  163 (183)
                      ++.++.+.|++...++.++++                          +|+++|.++.++.+.-
T Consensus        88 v~t~v~~~~~~s~~~~~~i~~--------------------------~g~~~a~~~~~~v~vd  124 (152)
T 2hx5_A           88 MELRPERLNPNSFQVHFEFRC--------------------------EEQIAAHALIRHLAIN  124 (152)
T ss_dssp             EEEEEEEEETTEEEEEEEEEE--------------------------TTEEEEEEEEEEECEE
T ss_pred             EEEEEEEeCCcEEEEEEEEEE--------------------------CCEEEEEEEEEEEEEe
Confidence            999999999999999999996                          3699999999998643

>3r87_A Putative uncharacterized protein; unknown function; 1.05A {Photobacterium profundum}

Probab=99.14  E-value=2e-09  Score=80.13  Aligned_cols=116  Identities=9%  Similarity=0.041  Sum_probs=91.5

Q ss_pred             EEEEEEcCCCCcCCCCcccHHHHHHHHHHHH-------HHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeC
Q 030085           37 IIGCFRVTQNSCQPFKVLHGGVSALIAESLA-------SMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLG  109 (183)
Q Consensus        37 v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~-------g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~G  109 (183)
                      ...++++....++++|.++.+.+..++|.+.       |+.......+...+.++++++|++|++.||.|.++.++.+.|
T Consensus         7 ~~~~~~Vr~~d~D~~ghv~~~~y~~~~e~ar~~~~~~~g~~~~~~~~~~~~vv~~~~i~y~~p~~~gd~v~v~t~v~~~~   86 (135)
T 3r87_A            7 YHHPVQIYYEDTDHSGVVYHPNFLKYFERAREHVIDSDKLATLWNDHGLGFAVYKANMIFQDGVEFAEICDIRTSFTLDG   86 (135)
T ss_dssp             EEEEEECCGGGBCTTSSBCTTHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEEEEEEECSCCCTTCEEEEEEEEEEET
T ss_pred             cEEEEEEehHHcCCCCeEeHHHHHHHHHHHHHHHHHHcCCChHHHhCCcEEEEEEEEEEECCcccCCCEEEEEEEEEEeC
Confidence            5678899999999999999999999999984       222111112345789999999999999999999999999999


Q ss_pred             CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCCCccchhHHHHH
Q 030085          110 KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKHAGDALK  177 (183)
Q Consensus       110 r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p~~~~~~~~~~~  177 (183)
                      ++...++.++++.                        .+|+++|.+..++.+.-... ++..+=+.++
T Consensus        87 ~~s~~~~~~i~~~------------------------~~g~~~a~~~~~~v~vd~~~-r~~~iP~~~~  129 (135)
T 3r87_A           87 KYKTLWRQEVWRP------------------------GASRAAVIGDIEMVCLDKEK-RLQPVPADIL  129 (135)
T ss_dssp             TTEEEEEEEEECT------------------------TCSSCSEEEEEEEEEECTTC-CEECCCHHHH
T ss_pred             CEEEEEEEEEEEC------------------------CCCEEEEEEEEEEEEECCCC-CEecCCHHHH
Confidence            9999999999972                        37899999999998654433 4433333433

>3qoo_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, hot-DOG superfamily; 1.25A {Thermanaerovibrio acidaminovorans}

Probab=99.07  E-value=2e-09  Score=84.14  Aligned_cols=104  Identities=13%  Similarity=-0.020  Sum_probs=87.8

Q ss_pred             EEEEEEEcCCCCcC-C-----CCcccHHHHHHHHHHHHHHHHHHhcC-CceeEEEEEeEEEecCCCCCCEEEEEEEEEEe
Q 030085           36 RIIGCFRVTQNSCQ-P-----FKVLHGGVSALIAESLASMGAHMASG-FKRVAGVQLTINHLKSAELGDLVRAVATPINL  108 (183)
Q Consensus        36 ~v~~~m~v~~~~~N-p-----~G~lHGG~~a~LaD~A~g~a~~~~~~-~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~  108 (183)
                      ..+.++.++++++- .     ...+=.+++.+|++.++..++....+ +...++++++++|++|.+.|++|+++|++++.
T Consensus        15 ~~~~~~~Vt~~~ta~~~gsg~~~V~aTp~mvalmE~aa~~~~~~~L~~G~~tVG~~v~v~Hlapt~~G~~V~~~a~v~~v   94 (138)
T 3qoo_A           15 YRRMVKKVSVSDTVTNRSKALEEFMSTAAFLETMTQLAVEILDHKLPEGFVSVGVRSEVHNLAPAVLGDDVTFTVTVDRV   94 (138)
T ss_dssp             EEEEEEECCGGGTGGGCCGGGTTBCCHHHHHHHHHHHHHHHHGGGSCTTEEEEEEEEEEEECSCCBTTCEEEEEEEEEEE
T ss_pred             EEEEEEEECHHHhhHhhcCCCCCcchHHHHHHHHHHHHHHHHHhhCCCCCeEEEEEEEEEEcCCCCCCCEEEEEEEEEEE
Confidence            46778888887752 2     24677899999999999888877665 46789999999999999999999999999999


Q ss_pred             CCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCC
Q 030085          109 GKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVP  166 (183)
Q Consensus       109 Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p  166 (183)
                      +++..+|++++++                         ++++ |+.|+++-++ +++.
T Consensus        95 ~gr~v~f~v~a~d-------------------------~~~~-I~~G~h~r~i-V~~~  125 (138)
T 3qoo_A           95 EGNRVVLSMKADD-------------------------PHGP-VATGLQERVV-VSTD  125 (138)
T ss_dssp             ETTEEEEEEEEEE-------------------------TTEE-EEEEEEEEEE-EEHH
T ss_pred             cCCEEEEEEEEEE-------------------------CCeE-EEEEEEEEEE-EcHH
Confidence            9999999999998                         5555 9999999995 4443

>4i4j_A ACP-polyene thioesterase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: TAR; 2.78A {Streptomyces globisporus}

Probab=99.02  E-value=2.6e-08  Score=76.64  Aligned_cols=109  Identities=6%  Similarity=-0.078  Sum_probs=88.4

Q ss_pred             CEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHH--------hcCCceeEEEEEeEEEecCCCCCCEEEEEEEEE
Q 030085           35 ERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHM--------ASGFKRVAGVQLTINHLKSAELGDLVRAVATPI  106 (183)
Q Consensus        35 g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~--------~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi  106 (183)
                      .....++++....+++.|.++.+.+..++|.+..--...        ...+...+.++++|+|++|+..||.|.++.++.
T Consensus        10 ~~~~~~~~Vr~~D~D~~Ghv~~~~yl~~~e~ar~~~~~~~G~~~~~~~~~g~~~vv~~~~i~y~~p~~~gd~v~v~t~v~   89 (159)
T 4i4j_A           10 DYFELRHTVGFEETNLVGNVYYVNYLRWQGRCRELFLKERAPSVLAEVQEDLKLFTLKVDCEFFAEITAFDELSIRMRLS   89 (159)
T ss_dssp             CSEEEEEECCGGGBCTTSCBCHHHHHHHHHHHHHHHHHHTCHHHHHHHTTTEEEEEEEEEEEECSCCCTTCEEEEEEEEE
T ss_pred             ccEEEEEEeCHHHcCCCccCcHHHHHHHHHHHHHHHHHHhCCCHHHHhcCCceEEEEEEEeEECCCCCCCCEEEEEEEEE
Confidence            456778999999999999999999999999985321111        113346789999999999999999999999999


Q ss_pred             EeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecC
Q 030085          107 NLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLP  164 (183)
Q Consensus       107 ~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p  164 (183)
                      +.|++...++.++++..                     ..++|+++|.++.++.+.-.
T Consensus        90 ~~~~~s~~~~~~i~~~~---------------------~~~~g~~~a~~~~~~v~vd~  126 (159)
T 4i4j_A           90 ELRQTQLEFTFDYIKLG---------------------DDGGETLVARGRQRIACMRG  126 (159)
T ss_dssp             EECSSEEEEEEEEEEEC---------------------SSSCEEEEEEEEEEEEEEES
T ss_pred             EecCcEEEEEEEEEECC---------------------CCCCCeEEEEEEEEEEEEEC
Confidence            99999999999999820                     01468999999999886543

>3cjy_A Putative thioesterase; YP_496845.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE PGE; 1.70A {Novosphingobium aromaticivorans}

Probab=98.98  E-value=6.2e-09  Score=87.44  Aligned_cols=99  Identities=20%  Similarity=0.204  Sum_probs=78.5

Q ss_pred             EEEEeCCEEEEEEEcCCCCcC-CCC--cccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEE
Q 030085           29 LEELTPERIIGCFRVTQNSCQ-PFK--VLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATP  105 (183)
Q Consensus        29 ~~~~~~g~v~~~m~v~~~~~N-p~G--~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~v  105 (183)
                      ++.+++++..  -...+.+++ +.|  .+|||.++++++.|+...+    +   ....+++++||+|+..|..+++++++
T Consensus         9 v~~~~~~~f~--~~~~~~~~~G~~~~~~~~GG~~~a~~~~Aa~~~~----~---~~~~sl~~~fl~p~~~~~p~~~~v~~   79 (259)
T 3cjy_A            9 LVRQDDARYA--ITVGPDLAVGPPGHAYLFGGASMALALDVAAETV----G---RPVVQGSLQFVSFTPLGSVLDLTVEV   79 (259)
T ss_dssp             CEEEETTEEE--EECCGGGEECSTTCCEECHHHHHHHHHHHHHHHH----T---SCEEEEEEEECSCCBTTCEEEEEEEE
T ss_pred             eEEcCCCeEE--EecCcccccCCCCCcccchhHHHHHHHHHHHHhc----C---CCcEEEEEEccCCcCCCCCEEEEEEE
Confidence            4556677544  344444554 444  4999999999999876554    2   23568999999999999789999999


Q ss_pred             EEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085          106 INLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus       106 i~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      +|.||+++..+++++.                          +|++|++++++|...
T Consensus        80 ~r~Grs~~~~~v~~~q--------------------------~g~~~~~a~asf~~~  110 (259)
T 3cjy_A           80 LQSGRTLAQARVAGTV--------------------------DGRLVFHSGISLGMR  110 (259)
T ss_dssp             EEECSSCEEEEEEEEE--------------------------TTEEEEEEEEEECCC
T ss_pred             EEcCCCEEEEEEEEEE--------------------------CCEEEEEEEEEcccC
Confidence            9999999999999994                          589999999999843

>1iq6_A (R)-hydratase, (R)-specific enoyl-COA hydratase; polyhydroxyalkanoate, aeromonas caviae, the hydratase 2 motif, lyase; 1.50A {Aeromonas punctata} SCOP: d.38.1.4

Probab=98.95  E-value=2.5e-08  Score=73.81  Aligned_cols=82  Identities=16%  Similarity=0.135  Sum_probs=66.9

Q ss_pred             CCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEe--CCcEEEEEEEEEEcccccC
Q 030085           50 PFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINL--GKTIQVWQVRLWKVKEVQS  127 (183)
Q Consensus        50 p~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~--Gr~~~~~~v~i~~~~~~~~  127 (183)
                      +..++||+.++++++.+++    ...++...+....+++|++|+.+||+|+++++++..  ++.+..+++++++      
T Consensus        49 ~~~i~hG~~~~~l~~~~~~----~~~~~~~~~~~~~~~rf~~Pv~~Gd~l~~~~~v~~~~~~~~~v~~~~~~~n------  118 (134)
T 1iq6_A           49 ERPIVHGMLLASLFSGLLG----QQLPGKGSIYLGQSLSFKLPVFVGDEVTAEVEVTALREDKPIATLTTRIFT------  118 (134)
T ss_dssp             CSCBCCHHHHHHHHHHHHH----HTSSCTTCEEEEEEEEECSCCBTTCEEEEEEEEEEECSSSSEEEEEEEEEC------
T ss_pred             CCceECHHHHHHHHHHHHh----hhcCCCceEEEEEEEEEcCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEe------
Confidence            3458999999999987643    122333456678999999999999999999999876  4678888999987      


Q ss_pred             CCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          128 DDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                                         ++|++++.++.+++
T Consensus       119 -------------------~~g~~v~~~~~~~~  132 (134)
T 1iq6_A          119 -------------------QGGALAVTGEAVVK  132 (134)
T ss_dssp             -------------------TTSCEEEEEEEEEE
T ss_pred             -------------------CCCCEEEEeEEEEE
Confidence                               67999999999987

>3hm0_A Probable thioesterase; niaid, ssgcid, decode, UW, SBRI, infectious disease, rhizobiales, bacteremia, endocarditis, bacillary angiomatosis; 2.50A {Bartonella henselae}

Probab=98.89  E-value=9.5e-08  Score=74.96  Aligned_cols=105  Identities=12%  Similarity=-0.085  Sum_probs=87.4

Q ss_pred             CCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHh--------c----CCceeEEEEEeEEEecCCCCCCEEEE
Q 030085           34 PERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMA--------S----GFKRVAGVQLTINHLKSAELGDLVRA  101 (183)
Q Consensus        34 ~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~--------~----~~~~~vTv~l~i~flrpa~~Gd~l~a  101 (183)
                      +.....++.+....++++|.++.+.+..++|.+..--....        .    .+...+.++++|+|++|++.||.|.+
T Consensus        34 ~~~~~~~~~Vr~~D~D~~GhVnn~~yl~~~e~ar~~~~~~~G~~~~~l~~~~~~~g~~~vv~~~~i~y~~p~~~gd~i~V  113 (167)
T 3hm0_A           34 NAFHDFQARVYVADTDFSGVVYHARYLEFFERGRSEFLRDTGFNNTLLASGVEGEKLFFVVRHMEINFSRPAQIDNLLTI  113 (167)
T ss_dssp             CCCEEEEEECCGGGBCTTSSBCTTHHHHHHHHHHHHHHHTTSCCHHHHHHTTTSSCEEEEEEEEEEEECSCCCTTCEEEE
T ss_pred             CCceEEEEEeChHHcCCCCeecHHHHHHHHHHHHHHHHHHcCCCHHHHhhccccCCeEEEEEEEEEEEecCCCCCCEEEE
Confidence            34467889999999999999999999999999853222111        1    23357889999999999999999999


Q ss_pred             EEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecC
Q 030085          102 VATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLP  164 (183)
Q Consensus       102 ~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p  164 (183)
                      +.++.+.|++...++.+|++                          +|+++|.+..++.+.-.
T Consensus       114 ~t~v~~~~~~s~~~~~~i~~--------------------------~g~~~a~a~~~~V~vD~  150 (167)
T 3hm0_A          114 KTRISRLQGARFFMEQYILH--------------------------GESMLVTAKVEIALINE  150 (167)
T ss_dssp             EEEEEEECSSEEEEEEEEEE--------------------------TTEEEEEEEEEEEEEET
T ss_pred             EEEEEEeCCeEEEEEEEEEE--------------------------CCEEEEEEEEEEEEECC
Confidence            99999999999999999996                          37999999999986543

>3rqb_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta sandwich; HET: MSE; 2.80A {Alicyclobacillus acidocaldarius subsp}

Probab=98.89  E-value=3.5e-08  Score=83.60  Aligned_cols=107  Identities=14%  Similarity=0.171  Sum_probs=84.8

Q ss_pred             CCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCC
Q 030085           18 PDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGD   97 (183)
Q Consensus        18 ~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd   97 (183)
                      ..+|.+.|.++-.   ++..+.+...  ..+ ..+.+|||.+++++..|+..   . .+ .......++++||+|+..| 
T Consensus         9 ~~~~~~~l~l~~~---~~~~~g~~~~--~~~-~~~~~~GG~~~a~~~~Aa~~---~-~~-~~~~~~sl~~~fl~~~~~~-   76 (275)
T 3rqb_A            9 THAFDDATALSFD---GRQFHGQVKA--EYY-NMVGPFGGITAATMLKAAMS---H-PE-RLGQPLALTVNFAAPAKVA-   76 (275)
T ss_dssp             CCHHHHHSCCEEC---SSSEEEECCG--GGB-CSSSBCHHHHHHHHHHHHHH---S-TT-CCSEEEEEEEEESSCCCSS-
T ss_pred             CCCHHHHhCCEEc---CCEEEEecCc--hhc-cCCCCcHHHHHHHHHHHHHh---c-cc-cCCCeEEEEEEeeCCCCCC-
Confidence            4678899887644   6766666543  333 36789999999999987532   1 22 2346689999999999988 


Q ss_pred             EEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085           98 LVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus        98 ~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      .+.++.+++|.||+++.++++++.                          +|++|++++++|...
T Consensus        77 p~~~~v~~~R~Grs~~~~~v~~~Q--------------------------~g~~~~~~~~~f~~~  115 (275)
T 3rqb_A           77 PFVIEAVPVRTNRSTQHFTLTMMQ--------------------------DGEVVTTATAVFGIR  115 (275)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEEEE--------------------------TTEEEEEEEEEEECC
T ss_pred             CEEEEEEEEEcCCCEEEEEEEEEE--------------------------CCEEEEEEEEEECCC
Confidence            899999999999999999999994                          589999999999843

>1q6w_A Monoamine oxidase regulatory protein, putative; structural genomics, nysgxrc T805, hot DOG fold; 2.81A {Archaeoglobus fulgidus} SCOP: d.38.1.4

Probab=98.74  E-value=1.2e-07  Score=73.20  Aligned_cols=84  Identities=12%  Similarity=0.118  Sum_probs=65.5

Q ss_pred             CCcccHHHHHHHHHHHHHHHHHHhcCCc----eeEEEEEeEEEecCCCCCCEEEEEEEEEEeC-----CcEEEEEEEEEE
Q 030085           51 FKVLHGGVSALIAESLASMGAHMASGFK----RVAGVQLTINHLKSAELGDLVRAVATPINLG-----KTIQVWQVRLWK  121 (183)
Q Consensus        51 ~G~lHGG~~a~LaD~A~g~a~~~~~~~~----~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~G-----r~~~~~~v~i~~  121 (183)
                      ...+||..++++++.+.+...  ...+.    ..+...++++|++|+.+||+|+++++++...     +.+..+++++++
T Consensus        63 ~~iahG~~~~~l~~~~~~~~~--~~~~~~~~~~~v~~~~~~rF~~PV~~Gd~l~~~~~v~~~~~~~~~~~~v~~~~~~~n  140 (161)
T 1q6w_A           63 KPIAQGMLVLSIALGMVDQVI--LSNYDVSSVIAFFGIKDVRFLRPVFIGDTIAASAEVVEKQDFDEKSGVVTYKLEVKN  140 (161)
T ss_dssp             SCBCCHHHHHHHHHHHHHHHH--HTTSBGGGEEEEEEEEEEEECSCCBTTCEEEEEEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred             CcccCHHHHHHHHHhhhhccc--CCccccccccccceeEEEEEecCCCCCCEEEEEEEEEEEEecCCCceEEEEEEEEEe
Confidence            457999999999987765422  11111    2237788899999999999999999998543     467788888887


Q ss_pred             cccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          122 VKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                                               ++|++++.++.++++
T Consensus       141 -------------------------~~g~~v~~~~~~~~~  155 (161)
T 1q6w_A          141 -------------------------QRGELVLTALYSALI  155 (161)
T ss_dssp             -------------------------TTSCEEEEEEEEEEE
T ss_pred             -------------------------CCCCEEEEEEEEEEE
Confidence                                     679999999999984

>2b3n_A Hypothetical protein AF1124; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.25A {Archaeoglobus fulgidus} PDB: 2b3m_A 3k67_A

Probab=98.54  E-value=1.6e-06  Score=68.13  Aligned_cols=78  Identities=15%  Similarity=0.222  Sum_probs=66.5

Q ss_pred             CcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCC
Q 030085           52 KVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGR  131 (183)
Q Consensus        52 G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~  131 (183)
                      -.+||..+++++..+.+     ..++. ......++.|++|+.+||+|++++++...++.+..+++++ +          
T Consensus        81 ~IahG~lt~al~~~~~~-----~~~g~-~~~~~~~~rF~~PV~~GD~L~~~~~v~~~~~~~v~~~~~~-~----------  143 (159)
T 2b3n_A           81 RVVHGMLTTSLVSAAVA-----RLPGT-VVLLEQSFRYTSPVRIGDVVRVEGVVSGVEKNRYTIDVKC-Y----------  143 (159)
T ss_dssp             CCCCHHHHHHHHHHHHH-----TSSSC-EEEEEEEEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEE-E----------
T ss_pred             cccCHHHHHHHHHHHHH-----hCCCc-eeeeeeeeEECCCcCCCCEEEEEEEEEEEcCCEEEEEEEE-E----------
Confidence            37899999999986643     23334 6677789999999999999999999998888899999999 7          


Q ss_pred             CCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          132 DHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       132 ~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                                     .+|++|+.++.++++
T Consensus       144 ---------------~~G~~V~~g~~~v~v  158 (159)
T 2b3n_A          144 ---------------TGDKVVAEGVVKVLI  158 (159)
T ss_dssp             ---------------ETTEEEEEEEEEEEE
T ss_pred             ---------------eCCeEEEEEEEEEEE
Confidence                           679999999999884

>2own_A Putative oleoyl-[acyl-carrier protein] thioestera; NP_784467.1, oleoyl thioesterase (putative); 2.00A {Lactobacillus plantarum} SCOP: d.38.1.8 d.38.1.8

Probab=98.53  E-value=4e-06  Score=69.08  Aligned_cols=102  Identities=9%  Similarity=-0.059  Sum_probs=86.1

Q ss_pred             EEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc--------CCceeEEEEEeEEEecCCCCCCEEEEEEEEEEe
Q 030085           37 IIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS--------GFKRVAGVQLTINHLKSAELGDLVRAVATPINL  108 (183)
Q Consensus        37 v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~--------~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~  108 (183)
                      ....+++....+++.|.++-+.+..+++.+...-.....        .+...+.++++|+|++|+..||.|+++.++.+.
T Consensus        12 ~~~~~~Vr~~d~D~~G~v~~~~y~~~~e~ar~~~~~~~G~~~~~~~~~g~~~vv~~~~i~y~~~~~~gd~l~V~t~v~~~   91 (262)
T 2own_A           12 YSEQHRITYYECDRTGRATLTTLIDIAVLASEDQSDALGLTTEMVQSHGVGWVVTQYAIDITRMPRQDEVVTIAVRGSAY   91 (262)
T ss_dssp             EEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHHTTCCHHHHHTTTEEEEEEEEEEEESSCCBTTCEEEEEEEEEEE
T ss_pred             EEEEEEEcHHHcCCCCcCCHHHHHHHHHHHHHHHHHHcCCCHHHHHhCCcEEEEEEeEEEEEecCCCCCEEEEEEEEEec
Confidence            456789999999999999999999999988643322211        123568899999999999999999999999999


Q ss_pred             CCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEec
Q 030085          109 GKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNL  163 (183)
Q Consensus       109 Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~  163 (183)
                      |++....+.+|++                         .+|+++|.+..++.+.-
T Consensus        92 ~~~~~~~~~~i~~-------------------------~~g~~~a~~~~~~v~vd  121 (262)
T 2own_A           92 NPYFAYREFWIRD-------------------------ADGQQLAYITSIWVMMS  121 (262)
T ss_dssp             CSSCEEEEEEEEC-------------------------TTCCEEEEEEEEEEEEE
T ss_pred             CCcEEEEEEEEEc-------------------------CCCCEEEEEEEEEEEEE
Confidence            9999999999997                         57899999999987643

>2ess_A Acyl-ACP thioesterase; NP_810988.1, structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Bacteroides thetaiotaomicron} SCOP: d.38.1.8 d.38.1.8

Probab=98.48  E-value=1.2e-05  Score=65.76  Aligned_cols=101  Identities=10%  Similarity=-0.157  Sum_probs=85.8

Q ss_pred             EEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc--------CCceeEEEEEeEEEecCCCCCCEEEEEEEEEEe
Q 030085           37 IIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS--------GFKRVAGVQLTINHLKSAELGDLVRAVATPINL  108 (183)
Q Consensus        37 v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~--------~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~  108 (183)
                      .+..+++....+++.|.++=+.++.+++.+...-.....        .+...+.++++|+|++|+..||.|+++.++.+.
T Consensus         9 ~~~~~~Vr~~d~D~~Ghv~~~~y~~~~e~ar~~~~~~~G~~~~~~~~~~~~~vv~~~~i~y~~~~~~~d~l~V~t~v~~~   88 (248)
T 2ess_A            9 GTYQFVAEPFHVDFNGRLTMGVLGNHLLNCAGFHASDRGFGIATLNEDNYTWVLSRLAIELDEMPYQYEKFSVQTWVENV   88 (248)
T ss_dssp             EEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHHTTCSHHHHHHTTEEEEEEEEEEEESCCCBTTCEEEEEEEEEEE
T ss_pred             eEEEEEeeeEEECCCCcCCHHHHHHHHHHHHHHHHHhhCCCHHHHHhCCcEEEEEEeEEEEccCCCCCCEEEEEEEEeec
Confidence            456788999999999999999999999988543332211        123568899999999999999999999999999


Q ss_pred             CCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085          109 GKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus       109 Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      |++....+.+|++                         ++|+++|.++.++.+.
T Consensus        89 ~~~~~~~~~~i~~-------------------------~~g~~~a~~~~~~v~v  117 (248)
T 2ess_A           89 YRLFTDRNFAVID-------------------------KDGKKIGYARSVWAMI  117 (248)
T ss_dssp             CSSEEEEEEEEEC-------------------------TTSCEEEEEEEEEEEE
T ss_pred             CCcEEEEEEEEEc-------------------------CCCCEEEEEEEEEEEE
Confidence            9999999999997                         5789999999999864

>1c8u_A Acyl-COA thioesterase II; internal repeats, hydrolase; HET: LDA; 1.90A {Escherichia coli} SCOP: d.38.1.3 d.38.1.3

Probab=98.38  E-value=4.5e-06  Score=70.72  Aligned_cols=104  Identities=12%  Similarity=0.021  Sum_probs=79.2

Q ss_pred             chhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEE
Q 030085           20 APLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLV   99 (183)
Q Consensus        20 p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l   99 (183)
                      .|.+.|.++  .++++..+...+..     ..+.+|||.+++++=.|+   . ...+. ...-..|+..||+|+..|..+
T Consensus         6 ~l~~~l~l~--~~~~~~f~g~~~~~-----~~~~~fGG~v~aqal~AA---~-~tv~~-~~~~~Slh~~Fl~pg~~~~pi   73 (285)
T 1c8u_A            6 NLLTLLNLE--KIEEGLFRGQSEDL-----GLRQVFGGQVVGQALYAA---K-ETVPE-ERLVHSFHSYFLRPGDSKKPI   73 (285)
T ss_dssp             HHHHHHSCE--EEETTEEEECCCCS-----SCSBCCHHHHHHHHHHHH---H-HTSCT-TCEEEEEEEEECSCCBTTSCE
T ss_pred             HHHhhcCcE--EcCCCeEECccCCC-----CCCcccchHHHHHHHHHH---H-HhCCC-CCceEEEEEEccCCCCCCCCE
Confidence            466776664  56777665554322     367899999999875442   2 22232 234478999999999999889


Q ss_pred             EEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          100 RAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       100 ~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      ..+.+++|.||+++..+++++.                          +|++|..++++|..
T Consensus        74 ~~~Ve~lRdGrs~s~r~V~a~Q--------------------------~g~~i~~~~asf~~  109 (285)
T 1c8u_A           74 IYDVETLRDGNSFSARRVAAIQ--------------------------NGKPIFYMTASFQA  109 (285)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEE--------------------------TTEEEEEEEEEEEC
T ss_pred             EEEEEEEecCCcEEEEEEEEEE--------------------------CCEEEEEEEEEcCC
Confidence            9999999999999999999994                          58999999999973

>1tbu_A Peroxisomal acyl-coenzyme A thioester hydrolase 1; yeast peroxisomal thioesterase, , domain swapping, iodine SOAK, siras; 2.20A {Saccharomyces cerevisiae} SCOP: d.38.1.3

Probab=98.33  E-value=9.7e-06  Score=61.66  Aligned_cols=106  Identities=14%  Similarity=0.086  Sum_probs=72.1

Q ss_pred             chhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEE
Q 030085           20 APLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLV   99 (183)
Q Consensus        20 p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l   99 (183)
                      .|.+.|  +++.++++..+..  ..++.-...+.++||-+++.+=.|    +....+. ...-..++..||+|...+.+|
T Consensus        10 ~l~~~l--~le~~~~~~f~g~--~~~~~~~~~~~vfGG~v~aqal~A----A~~tv~~-~~~~hSlh~~Fl~pg~~~~Pi   80 (118)
T 1tbu_A           10 NLEKIL--ELVPLSPTSFVTK--YLPAAPVGSKGTFGGTLVSQSLLA----SLHTVPL-NFFPTSLHSYFIKGGDPRTKI   80 (118)
T ss_dssp             ---CCS--CEEECSSSEEEES--SCC--------CCHHHHHHHHHHH----HHTTSCT-TCEEEEEEEEECSCCCTTSCC
T ss_pred             HHHhhc--ceEEcCCCeEEcc--CCCcCCCCCcccchHHHHHHHHHH----HHHhCCC-CCCcEEEEEEecCCCCCCCCE
Confidence            344444  4556777755544  112222345689999999986443    2222232 235567899999999999899


Q ss_pred             EEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          100 RAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       100 ~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      ..+.+.+|.||+.+..+++++.                          +|++|.+++++|.
T Consensus        81 ~~~Ve~lRdGrsfstr~V~a~Q--------------------------~g~~i~~~~~SF~  115 (118)
T 1tbu_A           81 TYHVQNLRNGRNFIHKQVSAYQ--------------------------HDKLIFTSMILFA  115 (118)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEE--------------------------TTEEEEEEEEEEE
T ss_pred             EEEEEEEECCCcEEEEEEEEEE--------------------------CCEEEEEEEEEec
Confidence            9999999999999999999994                          5899999999986

>1u1z_A (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; fatty acid biosynthesis, hot DOG fold, lyase; 2.50A {Pseudomonas aeruginosa} SCOP: d.38.1.6

Probab=98.31  E-value=9.6e-05  Score=58.05  Aligned_cols=108  Identities=16%  Similarity=0.077  Sum_probs=76.0

Q ss_pred             EEEEEeC--CEEEEEEEcCCCCc---CCC---CcccHHHHHHHHHHHHHHHHH-Hh----cCCceeEEEEE-eEEEecCC
Q 030085           28 ELEELTP--ERIIGCFRVTQNSC---QPF---KVLHGGVSALIAESLASMGAH-MA----SGFKRVAGVQL-TINHLKSA   93 (183)
Q Consensus        28 ~~~~~~~--g~v~~~m~v~~~~~---Np~---G~lHGG~~a~LaD~A~g~a~~-~~----~~~~~~vTv~l-~i~flrpa   93 (183)
                      ++.++++  ++++....++.+..   ..+   .++||-.+..++--+++..+. ..    .++....-..+ ++.|.+|+
T Consensus        42 rv~~~~~~g~~i~~~~~vt~d~~ff~ghFpg~pI~pGvl~iE~~aQ~~~~~~~~~~~~~~~~~~~~~~~gi~~vrF~~pV  121 (168)
T 1u1z_A           42 RVVELDIEGKRIRAYKNVSINEPFFNGHFPEHPIMPGVLIIEAMAQAAGILGFKMLDVKPADGTLYYFVGSDKLRFRQPV  121 (168)
T ss_dssp             EEEEEETTTTEEEEEEECCTTSTTGGGSCTTSCCCCHHHHHHHHHHHHHHHHHHHHTCCC---CEEEEEEEEEEEECSCC
T ss_pred             EEEEEecCCCEEEEEEEeCCCCCeEeCCCCCCCccCHHHHHHHHHHHHHHHHHhhccccccCCceEEEeeccEEEECCcC
Confidence            6788887  78888888777532   222   358998776555444443322 11    11222222333 69999999


Q ss_pred             CCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           94 ELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        94 ~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      .+||+|++++++++..+.+..++++++.                          +|++++.++.++++
T Consensus       122 ~pGD~L~~~v~v~~~~~g~~~~~~~~~v--------------------------~g~~v~~a~~~~~~  163 (168)
T 1u1z_A          122 LPGDQLQLHAKFISVKRSIWKFDCHATV--------------------------DDKPVCSAEIICAE  163 (168)
T ss_dssp             CTTCEEEEEEEEEEEETTEEEEEEEEEE--------------------------TTEEEEEEEEEEEE
T ss_pred             CCCCEEEEEEEEEEEeCCEEEEEEEEEE--------------------------CCEEEEEEEEEEEE
Confidence            9999999999999887788899999985                          58999999999884

>3u0a_A Acyl-COA thioesterase II TESB2; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, hydrolase; 2.50A {Mycobacterium marinum}

Probab=98.30  E-value=6.8e-06  Score=70.07  Aligned_cols=106  Identities=14%  Similarity=0.037  Sum_probs=77.9

Q ss_pred             hhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEE
Q 030085           21 PLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVR  100 (183)
Q Consensus        21 ~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~  100 (183)
                      |.+.|.++  .++++..+...+...  +...+.+|||.+++.+=.|+   .. ..+. ...-..|+..||+|+..+..|.
T Consensus         7 l~~~l~le--~~~~~~f~g~~~~~~--~~~~~~~fGG~v~aqal~AA---~~-tv~~-~~~~hSlh~~Fl~pg~~~~pi~   77 (285)
T 3u0a_A            7 IEEILDLE--QLEVNIYRGSVFSPE--SGFLQRTFGGHVAGQSLVSA---VR-TVDP-RYQVHSLHGYFLRSGDAQEPTV   77 (285)
T ss_dssp             GGGGGCCE--EEETTEEEECC---------CHHHHHHHHHHHHHHHH---HH-TSCT-TSEEEEEEEEECCCCCTTSCEE
T ss_pred             hHHhcCeE--ECCCCeEEccCCccc--ccCCCcccHHHHHHHHHHHH---HH-hCCC-CCceEEEEEEecCCCCCCCCEE
Confidence            66666554  567776655443322  22367899999998875442   22 2232 3466789999999999998999


Q ss_pred             EEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          101 AVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       101 a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      .+.+++|.||+++..+|+++.                          +|++|.+++++|..
T Consensus        78 ~~Ve~lRdGRsfs~r~V~a~Q--------------------------~g~~i~~~~asf~~  112 (285)
T 3u0a_A           78 FLVERTRDGGSFVTRRVNAVQ--------------------------HGEVIFSMGASFQT  112 (285)
T ss_dssp             EEEEEEEECSSEEEEEEEEEE--------------------------TTEEEEEEEEEEEC
T ss_pred             EEEEEEeCCCcEEEEEEEEEE--------------------------CCEEEEEEEEEcCC
Confidence            999999999999999999994                          58999999999973

>3ir3_A HTD2, 3-hydroxyacyl-thioester dehydratase 2; structural GENO structural genomics consortium, SGC, lyase; 1.99A {Homo sapiens}

Probab=98.28  E-value=1.7e-05  Score=60.95  Aligned_cols=80  Identities=16%  Similarity=0.103  Sum_probs=62.8

Q ss_pred             cccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCC
Q 030085           53 VLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRD  132 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~  132 (183)
                      .+||...++++..+.+    ...++....-...++.|.+|+.+||+|++++++.....+...++++++. +         
T Consensus        62 iahG~~~~~l~~~~~~----~~~~~~~~~~~~~~~rf~~PV~~Gd~l~~~~~v~~~~~~~~~v~~~~~~-~---------  127 (148)
T 3ir3_A           62 IVHGVLINGLISALLG----TKMPGPGCVFLSQEISFPAPLYIGEVVLASAEVKKLKRFIAIIAVSCSV-I---------  127 (148)
T ss_dssp             BCCHHHHHHHHHHHHH----HTSSCTTCEEEEEEEECCSCCBTTCEEEEEEEEEEEETTEEEEEEEEEE-T---------
T ss_pred             ccchHHHHHHHHHHHH----hhcCCCceEEEEEEEEECCCcCCCCEEEEEEEEEEEcCCeEEEEEEEEE-c---------
Confidence            6899999988764321    1233333455678999999999999999999999887777778888774 1         


Q ss_pred             CCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          133 HDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       133 ~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                                    ++|++|+.++.+++
T Consensus       128 --------------~~G~~V~~g~~~~~  141 (148)
T 3ir3_A          128 --------------ESKKTVMEGWVKVM  141 (148)
T ss_dssp             --------------TTCCEEEEEEEEEE
T ss_pred             --------------CCCCEEEEEEEEEE
Confidence                          57999999999988

>4gak_A Acyl-ACP thioesterase; MCSG, PSI-biology, structural genomics, midwest center for S genomics, hydrolase; HET: MSE; 1.90A {Spirosoma linguale}

Probab=98.26  E-value=8.3e-05  Score=61.48  Aligned_cols=106  Identities=11%  Similarity=0.095  Sum_probs=87.1

Q ss_pred             EEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc--------CCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCC
Q 030085           39 GCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS--------GFKRVAGVQLTINHLKSAELGDLVRAVATPINLGK  110 (183)
Q Consensus        39 ~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~--------~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr  110 (183)
                      -.++++...+++.|.++=..++.++..+...-+....        .+...+-+++.|+|.+|+..||.|+++.++...||
T Consensus        10 ~~f~Vr~~e~D~~g~v~~~~~l~~~q~a~~~~~~~~G~~~~~l~~~g~~wVv~~~~i~~~r~~~~~d~v~V~T~~~~~~~   89 (250)
T 4gak_A           10 DTFTLRGYECDAFGRMSIPALMNLMQESANRNAIDYGIGIADLAQKGVGWMLMRFCLRIHQYPRYGDTIQLMTYPTTVDK   89 (250)
T ss_dssp             EEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHHHTCSHHHHHTTTEEEEEEEEEEEESSCCBTTCEEEEEEEEEEECS
T ss_pred             EEEEECHHHcCCCCcCCHHHHHHHHHHHHHHHHHHcCCCHHHHHhcCceEEEEEEEEEEecCCCCCCEEEEEEEEEEcCC
Confidence            3688999999999999999999888887644332221        13456888999999999999999999999999999


Q ss_pred             cEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCCCcc
Q 030085          111 TIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHA  169 (183)
Q Consensus       111 ~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p~~~  169 (183)
                      ..+..+.+|++                         ++|+++|.|+.++.+.-....++
T Consensus        90 ~~~~r~~~i~d-------------------------~~g~~l~~a~s~wv~iD~~trrp  123 (250)
T 4gak_A           90 YFIHRDFRVLA-------------------------TDGTLLADARSTWLVFSMEKRSM  123 (250)
T ss_dssp             SEEEEEEEEEE-------------------------TTCCEEEEEEEEEEEEETTTTEE
T ss_pred             CEEEEEEEEEe-------------------------CCCCEEEEEEEEEEeeccccCCC
Confidence            99999999998                         78999999999998654443333

>3exz_A MAOC-like dehydratase; Q2RSA1_rhort, NESG, RRR103A, structur genomics, PSI-2, protein structure initiative; 2.30A {Rhodospirillum rubrum}

Probab=98.26  E-value=1.4e-05  Score=61.62  Aligned_cols=80  Identities=15%  Similarity=0.176  Sum_probs=62.7

Q ss_pred             cccHHHHHHHHH-HHHHHHHHHhcC-CceeEEEEEeEEEecCCCCCCEEEEEEEEEEe-------CCcEEEEEEEEEEcc
Q 030085           53 VLHGGVSALIAE-SLASMGAHMASG-FKRVAGVQLTINHLKSAELGDLVRAVATPINL-------GKTIQVWQVRLWKVK  123 (183)
Q Consensus        53 ~lHGG~~a~LaD-~A~g~a~~~~~~-~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~-------Gr~~~~~~v~i~~~~  123 (183)
                      ++||-.+++++- .+.+   . ..+ ......+++++.|++|+.+||+|+++++|+..       ++.+..+++++++  
T Consensus        54 iahG~~~~~l~~~~~~~---~-~~~~~~~~~~~~~~~rF~~PV~~GD~L~~~~~v~~~~~~~s~~~~~~v~~~~~~~n--  127 (154)
T 3exz_A           54 AASGWHTAAITMRLLVT---S-GLPLAQGIIGAGTELSWPNPTRPGDELHVETTVLAITPSKSRPDRAIVTCQSDTLN--  127 (154)
T ss_dssp             CCCHHHHHHHHHHHHHH---T-TSCBTTCCCEEEEEEECSSCCCTTCEEEEEEEEEEEEECSSCTTEEEEEEEEEEEC--
T ss_pred             ecChHHHHHHHHhhhhh---c-cccccceEecceeEEEEcCCCCCCCEEEEEEEEEEEEecccCCCceEEEEEEEEEe--
Confidence            789999999876 4322   1 223 23456677899999999999999999999854       3557778888887  


Q ss_pred             cccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          124 EVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                                             ++|++|+.++.++++
T Consensus       128 -----------------------q~Ge~V~~~~~~~~~  142 (154)
T 3exz_A          128 -----------------------QRGEVVQRSTAKVVV  142 (154)
T ss_dssp             -----------------------TTSCEEEEEEEEEEE
T ss_pred             -----------------------CCCCEEEEEEEEEEE
Confidence                                   789999999999984

>3rd7_A Acyl-COA thioesterase; seattle structur genomics center for infectious disease, ssgcid, hydrolase; 1.95A {Mycobacterium avium}

Probab=98.26  E-value=1.5e-05  Score=67.92  Aligned_cols=104  Identities=14%  Similarity=0.180  Sum_probs=79.5

Q ss_pred             CchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCE
Q 030085           19 DAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDL   98 (183)
Q Consensus        19 ~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~   98 (183)
                      ..|.+.|.+  +.++++..+...+.     ...+.+|||.+++.+=.|+   ..+  + ....-..|+..||+|+..+..
T Consensus         8 ~~l~~~l~l--e~i~~~~f~g~~~~-----~~~~~vfGG~v~Aqal~AA---~~t--~-~~~~~hSlh~yFl~pg~~~~P   74 (286)
T 3rd7_A            8 EDVLSLLDL--QQIDDAAFVGTQPD-----TPNHHIIGSQVAAQALMAA---GRT--T-PGRLAHSMHMYFLRRGDARQP   74 (286)
T ss_dssp             HHHHHHTCC--EEEETTEEEECCCC-----CTTCBCCHHHHHHHHHHHH---HHT--S-TTCEEEEEEEEECSCCBTTSC
T ss_pred             HHHHHhcce--EEcCCCeEEcccCC-----CCCCcccHHHHHHHHHHHH---HhC--C-CCCCcEEEEEEccCCCCCCCC
Confidence            345666555  45677766655443     2467899999998775442   222  3 235677899999999988768


Q ss_pred             EEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           99 VRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        99 l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      |..+.+.+|.||+.+..+|+++.                          +|++|.+++++|..
T Consensus        75 i~y~Ve~lRdGRSfstr~V~a~Q--------------------------~g~~i~~~~asF~~  111 (286)
T 3rd7_A           75 IQYDVTPLRDGGTISSRRVTASQ--------------------------SGVVLFEALASFTI  111 (286)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEE--------------------------TTEEEEEEEEEEEC
T ss_pred             EEEEEEEEECCCcEEEEEEEEEE--------------------------CCEEEEEEEEeccc
Confidence            99999999999999999999994                          68999999999984

>3d6x_A (3R)-hydroxymyristoyl-[acyl-carrier-protein] DEHY; FABZ, hot DOG fold, dehydratase, lipid biosynthesis, lipid synthesis, lyase; HET: MSE; 2.59A {Campylobacter jejuni subsp}

Probab=98.19  E-value=0.00014  Score=55.00  Aligned_cols=108  Identities=9%  Similarity=0.113  Sum_probs=72.3

Q ss_pred             EEEEEeC-CEEEEEEEcCCCCc--C-C---CCcccHHHHHH-HHHHHHHHHHHHhc-----CCceeEEEEE-eEEEecCC
Q 030085           28 ELEELTP-ERIIGCFRVTQNSC--Q-P---FKVLHGGVSAL-IAESLASMGAHMAS-----GFKRVAGVQL-TINHLKSA   93 (183)
Q Consensus        28 ~~~~~~~-g~v~~~m~v~~~~~--N-p---~G~lHGG~~a~-LaD~A~g~a~~~~~-----~~~~~vTv~l-~i~flrpa   93 (183)
                      +++++++ ++++....++.++.  + .   .-.++|-.+.. ++-.++.++.....     .+....-..+ ++.|.+|+
T Consensus        22 ~v~~~~~g~~~~~~~~v~~~~~~f~ghFp~~Pi~PGvl~iE~~aQ~~~~~~~~~~~~~~~~~~~~~~l~~i~~~kf~~pV  101 (146)
T 3d6x_A           22 KITELKVKEVVLGYKNISISDHVFMGHFPGHPIYPGVLILEGMAQTGGVLAFESMEDKVDPKSKVVYFTGIDGAKFRNPV  101 (146)
T ss_dssp             EEEEEETTTEEEEEEECCTTBTHHHHSCTTSCCCCHHHHHHHHHHHHHHHHHTC-------CCSCEEEEEEEEEEECSCC
T ss_pred             EEEEEcCCCEEEEEEEcCCCCCeecCCCCCCCcCchHHHHHHHHHHHHHHHhhccccccccCCcEEEEeeeeeeEECccc
Confidence            6777775 67788777777642  1 1   12466654443 44443322222101     1222233333 69999999


Q ss_pred             CCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           94 ELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        94 ~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      .+||+|++++++.+..+.+..++++++.                          +|+++++++.++++
T Consensus       102 ~pGd~l~~~~~v~~~~~~~~~~~~~~~~--------------------------~g~~v~~~~~~~~~  143 (146)
T 3d6x_A          102 RPGDRLDYEMSVVKNRGNMWIFKGQAFV--------------------------DGNLVAEAELKAMI  143 (146)
T ss_dssp             CTTCEEEEEEEEEEEETTEEEEEEEEEE--------------------------TTEEEEEEEEEEEE
T ss_pred             CCCCEEEEEEEEEEeeCCEEEEEEEEEE--------------------------CCEEEEEEEEEEEE
Confidence            9999999999999988889999999985                          48999999999884

>2own_A Putative oleoyl-[acyl-carrier protein] thioestera; NP_784467.1, oleoyl thioesterase (putative); 2.00A {Lactobacillus plantarum} SCOP: d.38.1.8 d.38.1.8

Probab=98.13  E-value=4.7e-05  Score=62.62  Aligned_cols=94  Identities=10%  Similarity=-0.068  Sum_probs=80.9

Q ss_pred             EEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCc-EEEE
Q 030085           37 IIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKT-IQVW  115 (183)
Q Consensus        37 v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~-~~~~  115 (183)
                      ....+++....+.++|.++=+....+++.+......     ...+.++++|+|++|+..||.|.+..++.+.|++ ...+
T Consensus       162 ~~~~~~Vr~~D~D~~gHVnn~~Y~~~~e~a~~~~~~-----~~~~v~~~~i~Y~~~~~~gd~l~v~~~v~~~~~~~s~~~  236 (262)
T 2own_A          162 ITKPYHVRFFDIDPNRHVNNAHYFDWLVDTLPATFL-----LQHDLVHVDVRYENEVKYGQTVTAHANILPSEVADQVTT  236 (262)
T ss_dssp             EEEEEECCGGGBCTTSSBCGGGHHHHHHHHSCHHHH-----HTEEEEEEEEEECSCCCTTCEEEEEEEEECCSSTTEEEE
T ss_pred             eeEEEEeCHHHcCcccCchHHHHHHHHHHHhHHHHh-----hcceEEEEEEEEccCcCCCCEEEEEEEEeecCCCceEEE
Confidence            677899999999999999999999999987531211     1468899999999999999999999999999998 7777


Q ss_pred             EEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          116 QVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       116 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      ..++++                          +|+++|.++.++.+
T Consensus       237 ~~~i~~--------------------------~~~~~a~~~~~~v~  256 (262)
T 2own_A          237 SHLIEV--------------------------DDEKCCEVTIQWRT  256 (262)
T ss_dssp             EEEEEE--------------------------TTEEEEEEEEEEEE
T ss_pred             EEEEec--------------------------CCEEEEEEEEEEEe
Confidence            888885                          47899999999987

>1z6b_A Pffabz, fatty acid synthesis protein; malaria, beta-hydroxyacyl-ACP dehydra fatty acid biosynthesis, SAD phasing, lyase; 2.09A {Plasmodium falciparum} SCOP: d.38.1.6 PDB: 3az8_A* 3az9_A* 3aza_A* 3azb_A* 1zhg_A 2oki_A 2okh_A

Probab=98.12  E-value=0.00026  Score=54.27  Aligned_cols=122  Identities=17%  Similarity=0.162  Sum_probs=77.1

Q ss_pred             cccCCCCchhhhcCCEEEEEeC-CEEEEEEEcCCCCc---CCC---CcccHHHHHHHHHHHHHHHHHHh---cCCceeEE
Q 030085           13 KRIAVPDAPLKAIGFELEELTP-ERIIGCFRVTQNSC---QPF---KVLHGGVSALIAESLASMGAHMA---SGFKRVAG   82 (183)
Q Consensus        13 ~~~~~~~p~~~~Lg~~~~~~~~-g~v~~~m~v~~~~~---Np~---G~lHGG~~a~LaD~A~g~a~~~~---~~~~~~vT   82 (183)
                      ..+....+++.+++ +++++++ +++.....++.++.   .++   -.+||-.+..++--++++.+...   .++....-
T Consensus        17 ~~~lPhr~P~llvD-~i~~~~~g~~~~~~~~vt~d~~~f~ghF~~~pI~pGvl~~E~~aq~~~~~~~~~~~~~~~~~~~~   95 (154)
T 1z6b_A           17 KKILPHRYPFLLVD-KVIYMQPNKTIIGLKQVSTNEPFFNGHFPQKQIMPGVLQIEALAQLAGILCLKSDDSQKNNLFLF   95 (154)
T ss_dssp             HHHCCCCTTSCCCC-EEEEEETTTEEEEEEECCTTSGGGGTSCTTSCCCCHHHHHHHHHHHHHHHHHHHC----CCCEEE
T ss_pred             HHhCCCCCCceeEE-EEEEEcCCCEEEEEEEeCCCchhhcCCCcCCCcChhHHHHHHHHHHHHHHHhccccccCCceEEe
Confidence            33343334444444 7788876 46777777777643   222   24788776644433344433221   12222333


Q ss_pred             EEE-eEEEecCCCCCCEEEEEEEEEEeCC--cEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEE-EEEE
Q 030085           83 VQL-TINHLKSAELGDLVRAVATPINLGK--TIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISS-STVT  158 (183)
Q Consensus        83 v~l-~i~flrpa~~Gd~l~a~a~vi~~Gr--~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~-~t~T  158 (183)
                      ..+ ++.|.+|+.+||+|++++++.....  .+..++++++                          .+|+++++ ++.+
T Consensus        96 ~gi~~~rF~~pV~pGd~l~~~~~v~~~~~~~g~~~~~~~~~--------------------------~~g~~v~~v~~~~  149 (154)
T 1z6b_A           96 AGVDGVRWKKPVLPGDTLTMQANLISFKSSLGIAKLSGVGY--------------------------VNGKVVINISEMT  149 (154)
T ss_dssp             EEEEEEEECSCCCTTCEEEEEEEEEEEETTTTEEEEEEEEE--------------------------ETTEEEEEEEEEE
T ss_pred             ccceeeEEccccCCCCEEEEEEEEEEeeCCceEEEEEEEEE--------------------------ECCEEEEEeeEEE
Confidence            333 6999999999999999999987644  3477888885                          35899999 9999


Q ss_pred             EEE
Q 030085          159 LLC  161 (183)
Q Consensus       159 ~~~  161 (183)
                      +++
T Consensus       150 ~~~  152 (154)
T 1z6b_A          150 FAL  152 (154)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            874

>4i83_A 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; FABZ, hot DOG fold, thioesterase, lyase; 2.60A {Neisseria meningitidis}

Probab=98.08  E-value=0.00027  Score=54.62  Aligned_cols=124  Identities=9%  Similarity=0.041  Sum_probs=80.9

Q ss_pred             hccccCCCCchhhhcCCEEEEEeC-CEEEEEEEcCCCCcCCCCccc-----HHHHH--HHHHHHHHHHHHHhc---CCce
Q 030085           11 QRKRIAVPDAPLKAIGFELEELTP-ERIIGCFRVTQNSCQPFKVLH-----GGVSA--LIAESLASMGAHMAS---GFKR   79 (183)
Q Consensus        11 ~~~~~~~~~p~~~~Lg~~~~~~~~-g~v~~~m~v~~~~~Np~G~lH-----GG~~a--~LaD~A~g~a~~~~~---~~~~   79 (183)
                      ++..+....+++-+++ ++.++++ ++++....++.++-=..|...     -|++.  ++|-.++.++.....   ++..
T Consensus        14 ~I~~~lPhr~P~llvD-rv~~~~~g~~i~~~~~v~~~~~ff~gHFp~~Pv~PGvl~iE~mAQ~~~~~~~~~~~~~~~~~~   92 (152)
T 4i83_A           14 DIQKLIPHRYPFLQLD-RITAFEPMKTLTAIKNVSINEPQFQGHFPDLPVMPGVLIIEAMAQACGTLAILSEGGRKENEF   92 (152)
T ss_dssp             HHHHHCCCCTTSCCCC-EEEEEETTTEEEEEEECCSSSGGGGTSCTTSCCCCHHHHHHHHHHHHHHHHHHHTTCCTTTCC
T ss_pred             HHHHhCCCCCCeEEEE-EEEEEcCCCEEEEEEEeCCCchhccCCCCCCCcCcHHHHHHHHHHHHHHHhhhccccccCCce
Confidence            3444444445555555 7788887 689999888876532123222     24332  333333323222211   1222


Q ss_pred             eEEEEE-eEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEE
Q 030085           80 VAGVQL-TINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVT  158 (183)
Q Consensus        80 ~vTv~l-~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T  158 (183)
                      ..-..+ ++.|.+|+.+||+|++++++.+..+.+..++++++.                          +|+++|+++.+
T Consensus        93 ~~l~gi~~vkF~~pV~PGd~L~i~~~v~~~~~~~~~~~~~~~v--------------------------~g~~va~~~l~  146 (152)
T 4i83_A           93 FFFAGIDEARFKRQVIPGDQLVFEVELLTSRRGIGKFNAVAKV--------------------------DGQVAVEAIIM  146 (152)
T ss_dssp             CEEEEECSEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEE--------------------------TTEEEEEEEEE
T ss_pred             EEEeeecEEEEccccCCCCEEEEEEEEEEeeCCEEEEEEEEEE--------------------------CCEEEEEEEEE
Confidence            333333 799999999999999999999988889999999984                          58999999999


Q ss_pred             EEE
Q 030085          159 LLC  161 (183)
Q Consensus       159 ~~~  161 (183)
                      +++
T Consensus       147 ~~~  149 (152)
T 4i83_A          147 CAK  149 (152)
T ss_dssp             EEC
T ss_pred             EEE
Confidence            873

>4ffu_A Oxidase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgrc, PS biology; HET: MSE; 1.80A {Sinorhizobium meliloti}

Probab=97.99  E-value=9.8e-05  Score=58.68  Aligned_cols=80  Identities=14%  Similarity=0.105  Sum_probs=58.9

Q ss_pred             cccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeC-------CcEEEEEEEEEEcccc
Q 030085           53 VLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLG-------KTIQVWQVRLWKVKEV  125 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~G-------r~~~~~~v~i~~~~~~  125 (183)
                      .+||-.+++++-.+.   .. ..++....-...++.|++|+.+||+|+++++|+..-       +.+..+++++++    
T Consensus        81 IahG~~t~~l~~~l~---~~-~~~~~~~~~g~~~~rF~~PV~~GDtL~~~~~v~~~~~~~s~~~~g~v~~~~~~~n----  152 (176)
T 4ffu_A           81 IAHGTMIFSIGVGLT---AS-LINPVAFSYGYDRLRFVRPVHIGDTIRTRVTIAAKEDDPKRPGAGRVVERCEVIN----  152 (176)
T ss_dssp             CCCHHHHHHHHHHHT---CC-CBCTTEEEEEEEEEEECSCCCTTCEEEEEEEEEEEEECTTCTTEEEEEEEEEEEC----
T ss_pred             ccChHHHHHHHHHHH---Hh-hcCCCeEEEEEeeEEEcCCccCCCEEEEEEEEEEEEecccCCCceEEEEEEEEEe----
Confidence            689999999875332   11 123332222334899999999999999999998542       237778888887    


Q ss_pred             cCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          126 QSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                                           ++|++|+.++.++++
T Consensus       153 ---------------------q~Ge~V~~g~~~v~v  167 (176)
T 4ffu_A          153 ---------------------QRGEVVLAADHILIV  167 (176)
T ss_dssp             ---------------------TTSCEEEEEEEEEEE
T ss_pred             ---------------------CCCCEEEEEEEEEEE
Confidence                                 789999999999984

>2gll_A FABZ, (3R)-hydroxymyristoyl-acyl carrier protein dehydratase; lyase; 2.20A {Helicobacter pylori} PDB: 2glm_A* 2glp_A* 2glv_A 3dp1_A* 3cf8_A* 3cf9_A* 3d04_A* 3doy_A* 3doz_A* 3dp0_A* 3b7j_A* 3dp2_A* 3dp3_A* 3ed0_A*

Probab=97.95  E-value=0.00084  Score=52.99  Aligned_cols=109  Identities=12%  Similarity=0.025  Sum_probs=72.6

Q ss_pred             CEEEEEeC-CEEEEEEEcCCCCcCCCC------cccHHHHH-HHHHHHHHHHHHHh-------cCCceeEEEEE-eEEEe
Q 030085           27 FELEELTP-ERIIGCFRVTQNSCQPFK------VLHGGVSA-LIAESLASMGAHMA-------SGFKRVAGVQL-TINHL   90 (183)
Q Consensus        27 ~~~~~~~~-g~v~~~m~v~~~~~Np~G------~lHGG~~a-~LaD~A~g~a~~~~-------~~~~~~vTv~l-~i~fl   90 (183)
                      =++.++++ ++++....++.+.--..|      ++.|=++. +++-.++.++....       ..+....-..+ ++.|.
T Consensus        43 Drv~~~~~g~~~~~~k~Vt~~e~ff~GHFp~~PvmPGvl~iE~mAQ~~a~~~~~~~~~~~~~~~~~~~~~l~gi~~vkF~  122 (171)
T 2gll_A           43 DRITELQANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFR  122 (171)
T ss_dssp             CEEEEEETTTEEEEEEECCSCSTHHHHSCTTSCCCCHHHHHHHHHHHHHHHHHHHHHCSCHHHHTTEEEEEEEEEEEEEC
T ss_pred             EEEEEEcCCCEEEEEEEeCCCCCeecCCCCCCCcCchHHHHHHHHHHHHHHHhhccccccccccCCceEEEEeeeEEEEC
Confidence            37777776 578888888876421112      23442222 24444333322221       12222223333 79999


Q ss_pred             cCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           91 KSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        91 rpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      +|+.+||+|++++++++..+.+..++++++.                          +|++++.++.++++
T Consensus       123 ~pV~PGD~L~i~v~v~~~~~~~~~~~~~~~v--------------------------~g~~va~g~~~~~~  167 (171)
T 2gll_A          123 IPVTPGDRLEYHLEVLKHKGMIWQVGGTAQV--------------------------DGKVVAEAELKAMI  167 (171)
T ss_dssp             SCCCTTCEEEEEEEEEEESSSEEEEEEEEEE--------------------------TTEEEEEEEEEEEE
T ss_pred             CccCCCCEEEEEEEEEEEeCCEEEEEEEEEE--------------------------CCEEEEEEEEEEEE
Confidence            9999999999999999988899999999985                          58999999999884

>2c2i_A RV0130; hotdog, hydratase, lyase, structural proteomics in europe, spine, structural genomics; 1.8A {Mycobacterium tuberculosis} SCOP: d.38.1.4

Probab=97.80  E-value=0.00011  Score=55.48  Aligned_cols=83  Identities=13%  Similarity=0.089  Sum_probs=57.3

Q ss_pred             CCcccHHHHHHHHHHHHHHHHHHh-cCC-c-eeEEEEEeEEEecCCCCCCEEEEEEEEEEe-----CCcEEEEEEEEE-E
Q 030085           51 FKVLHGGVSALIAESLASMGAHMA-SGF-K-RVAGVQLTINHLKSAELGDLVRAVATPINL-----GKTIQVWQVRLW-K  121 (183)
Q Consensus        51 ~G~lHGG~~a~LaD~A~g~a~~~~-~~~-~-~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~-----Gr~~~~~~v~i~-~  121 (183)
                      .-.+||..+++++..+.   .... .++ . .......++.|.+|+.+||+|+++++++..     |+-+..+++++. +
T Consensus        58 ~~IahG~l~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~rF~~PV~~Gd~l~~~~~v~~~~~~~~g~~~v~~~~~v~~~  134 (151)
T 2c2i_A           58 TTIAHGFMTLALLPRLQ---HQMYTVKGVKLAINYGLNKVRFPAPVPVGSRVRATSSLVGVEDLGNGTVQATVSTTVEVE  134 (151)
T ss_dssp             SCBCCHHHHHHTHHHHH---HTTCEESSCSCEEEEEEEEEECCSCCBTTCEEEEEEEEEEEEEEETTEEEEEEEEEEEET
T ss_pred             CceecHHHHHHHHHHHH---HhhcCcCCcceeeeeeeeEEEECCCcCCCCEEEEEEEEEEEEEcCCCcEEEEEEEEEEEc
Confidence            46899999998876433   1111 111 1 233445689999999999999999999754     232455566665 3


Q ss_pred             cccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          122 VKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                                               ++|++++.++.++++
T Consensus       135 -------------------------~~g~~v~~~~~~~~~  149 (151)
T 2c2i_A          135 -------------------------GSAKPACVAESIVRY  149 (151)
T ss_dssp             -------------------------TCSSCSEEEEEEEEE
T ss_pred             -------------------------CCCceEEEEEEEEEE
Confidence                                     568999999988874

>4h4g_A (3R)-hydroxymyristoyl-[acyl-carrier-protein] DEHY; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Burkholderia thailandensis}

Probab=97.75  E-value=0.0052  Score=48.21  Aligned_cols=110  Identities=16%  Similarity=0.076  Sum_probs=71.0

Q ss_pred             EEEEEeCC-EEEEEEEcCCCC--cC---CCCcccHHHH--HHHHHHHHHHHHHHhcC-----CceeEEEEE-eEEEecCC
Q 030085           28 ELEELTPE-RIIGCFRVTQNS--CQ---PFKVLHGGVS--ALIAESLASMGAHMASG-----FKRVAGVQL-TINHLKSA   93 (183)
Q Consensus        28 ~~~~~~~g-~v~~~m~v~~~~--~N---p~G~lHGG~~--a~LaD~A~g~a~~~~~~-----~~~~vTv~l-~i~flrpa   93 (183)
                      +++++++| ++++...++.+.  .+   |..-+--|++  =++|=.++ +.+.....     +....-..+ ++.|.+|+
T Consensus        33 rv~~~~~~~~i~a~k~Vt~~e~ff~gHFp~~PvmPGvL~iEamAQ~~~-~l~~~~~~~~~~~~~~~~l~~i~~~kF~~~V  111 (160)
T 4h4g_A           33 RVLELEPHKSIKALKNVTVNEPFFTGHFPKRPVMPGVLIIEALAQAAA-LLTFAEAEPKDPENTLYYFVGIDNARFKRVV  111 (160)
T ss_dssp             EEEEEETTTEEEEEEECCTTSGGGGTSCTTSCCCCHHHHHHHHHHHHH-HHHHTTC--------CEEEEEEEEEEECSCC
T ss_pred             EEEEecCCCEEEEEEEeccCcccccCCCCCCCcCcHHHHHHHHHHHHH-HHHhhhccccCCceeEEEEeccceEEECccc
Confidence            77888865 788877776542  22   2112233432  23333332 22221111     112222333 68999999


Q ss_pred             CCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCC
Q 030085           94 ELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPV  165 (183)
Q Consensus        94 ~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~  165 (183)
                      .+||+|+.++++++..+.+..++++++-                          +|+++|.++.++.+ .|.
T Consensus       112 ~PGd~L~i~v~~~~~~~~~~~~~~~~~v--------------------------~g~~va~ael~~~~-~~~  156 (160)
T 4h4g_A          112 EPGDQLILNVTFERYIRGIWKFKAVAEV--------------------------DGKVAAEAELMCTV-KTA  156 (160)
T ss_dssp             CTTCEEEEEEEEEEEETTEEEEEEEEEE--------------------------TTEEEEEEEEEEEE-CC-
T ss_pred             CCCCEEEEEEEEEEeeCCEEEEEEEEEE--------------------------CCEEEEEEEEEEEE-ccC
Confidence            9999999999999999999999999985                          58999999999983 443

>3k67_A Putative dehydratase AF1124; hypothetical protein AF1124, structural genomics, PSI, protein structure initiative; 1.25A {Archaeoglobus fulgidus} PDB: 2b3m_A

Probab=97.66  E-value=0.0014  Score=51.51  Aligned_cols=78  Identities=15%  Similarity=0.233  Sum_probs=59.4

Q ss_pred             CcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCC
Q 030085           52 KVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGR  131 (183)
Q Consensus        52 G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~  131 (183)
                      -++||-.+++++-.+.     ...++ ...-...+++|++|+.+||+|+++++|...-++...+++++.+          
T Consensus        81 ~IahG~l~~sl~~~~~-----~~~~g-~~~~~~~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~~~~~~~~----------  144 (159)
T 3k67_A           81 RVVHGMLTTSLVSAAV-----ARLPG-TVVLLEQSFRYTSPVRIGDVVRVEGVVSGVEKNRYTIDVKCYT----------  144 (159)
T ss_dssp             CCCCHHHHHHHHHHHH-----HTSSS-CEEEEEEEEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEE----------
T ss_pred             ceecHHHHHHHHHHHH-----hhcCC-ceeeeeeeeEEcCCcCCCCEEEEEEEEEEEECCEEEEEEEEEE----------
Confidence            3589999888864321     12333 3455677999999999999999999999877777788888876          


Q ss_pred             CCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          132 DHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       132 ~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                                     + +++|..|+++.++
T Consensus       145 ---------------~-d~vV~~G~a~VlV  158 (159)
T 3k67_A          145 ---------------G-DKVVAEGVVKVLI  158 (159)
T ss_dssp             ---------------T-TEEEEEEEEEEEE
T ss_pred             ---------------C-CEEEEEEEEEEEE
Confidence                           3 5788899988773

>3rqb_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta sandwich; HET: MSE; 2.80A {Alicyclobacillus acidocaldarius subsp}

Probab=97.43  E-value=0.0017  Score=54.72  Aligned_cols=88  Identities=14%  Similarity=0.131  Sum_probs=70.5

Q ss_pred             cccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCC-----CCCEEEEEEEEEEeCCcEEEEEEEEEEcccccC
Q 030085           53 VLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAE-----LGDLVRAVATPINLGKTIQVWQVRLWKVKEVQS  127 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~-----~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~  127 (183)
                      .+|=-.++.++|.....+...........|++++|.|.++..     .++.+..+++....+.-....+++|||      
T Consensus       179 ~~~~~~La~~sD~~~p~~~~~~~~~~~~~sld~ti~fh~~~~~~~~~~~~Wll~~~~s~~~~~Gr~~~~~~l~d------  252 (275)
T 3rqb_A          179 PLDHAALAALCDTFVPRVYVKLKRPVPIGTVTFTVYFLADPETIFRQGTNELLGVARATGFSHGYFDQIGEVWS------  252 (275)
T ss_dssp             CCCHHHHHHHTTCSCCHHHHHHTSCCCEEEEEEEEEECSCHHHHHHTTTCCEEEEEECSEEETTEEEEEEEEEC------
T ss_pred             CCCHHHHHHHHHcccHHHHHhcCCCCccceEEEEEEEecChhhcccCCCccEEEEEEchhhcCCceeeeEEEEC------
Confidence            368889999999775444332222245789999999999976     577899999988888888999999999      


Q ss_pred             CCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCC
Q 030085          128 DDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPV  165 (183)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~  165 (183)
                                         ++|+|||+++-+.++..|+
T Consensus       253 -------------------~~G~LvA~s~Q~~~vr~p~  271 (275)
T 3rqb_A          253 -------------------QDGDLLATTTQLVYMKAPV  271 (275)
T ss_dssp             -------------------TTSCEEEEEEEEEEECCCC
T ss_pred             -------------------CCCCEEEEEEEEEEEeCCC
Confidence                               7899999999999865544

>4e3e_A MAOC domain protein dehydratase; structural genomics, protein structure initiative, nysgrc, PSI-biology; 1.90A {Chloroflexus aurantiacus}

Probab=97.42  E-value=0.0038  Score=54.52  Aligned_cols=82  Identities=7%  Similarity=-0.074  Sum_probs=57.6

Q ss_pred             cccHHHHHHHHHHHHHHHHHHhcCCceeEEEE-EeEEEecCCCCCCEEEEEEEEEEeC------CcEEEEEEEEEEcccc
Q 030085           53 VLHGGVSALIAESLASMGAHMASGFKRVAGVQ-LTINHLKSAELGDLVRAVATPINLG------KTIQVWQVRLWKVKEV  125 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~-l~i~flrpa~~Gd~l~a~a~vi~~G------r~~~~~~v~i~~~~~~  125 (183)
                      .+||-..++++   +++..... ........- -++.|.+|+.+||+|+++++|+..-      +-+..+++++++    
T Consensus        62 iahG~l~~~l~---~g~~~~~~-~~~~~~~~g~~~~rF~~PV~~GDtL~~~~~V~~~~~~~~~~~g~v~~~~~~~n----  133 (352)
T 4e3e_A           62 PIDSLLVFHIV---FGKTVPDI-SLNAIANLGYAGGRFGAVVYPGDTLSTTSKVIGLRQNKDGKTGVVYVHSVGVN----  133 (352)
T ss_dssp             CCCHHHHHHHH---HHHHHHHH-TTTEEEEEEEEEEEECSCCCTTCEEEEEEEEEEEEECTTSSEEEEEEEEEEEC----
T ss_pred             ccCHHHHHHHH---Hhhccccc-ccccceeeEEeeEEEcCCcCCCCEEEEEEEEEEEEEcCCCCcEEEEEEEEEEe----
Confidence            57998888776   33332222 122222222 3899999999999999999998642      126777888887    


Q ss_pred             cCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEec
Q 030085          126 QSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNL  163 (183)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~  163 (183)
                                           ++|++|+.++.++++..
T Consensus       134 ---------------------q~Ge~V~~~~~~~~v~~  150 (352)
T 4e3e_A          134 ---------------------QWDEVVLEYIRWVMVRK  150 (352)
T ss_dssp             ---------------------TTSCEEEEEEEEEEEEC
T ss_pred             ---------------------CCCCEEEEEEEEEEEec
Confidence                                 68999999999998643

>2bi0_A Hypothetical protein RV0216; conserved hypothetical, hotdog-fold, structural proteomics in europe, spine, structural genomics; 1.9A {Mycobacterium tuberculosis} SCOP: d.38.1.4 d.38.1.4

Probab=97.12  E-value=0.0048  Score=53.69  Aligned_cols=81  Identities=9%  Similarity=0.072  Sum_probs=58.7

Q ss_pred             CcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEE-eEEEecCCCCCCEEEEEEEEEEe----------CCcEEEEEEEEE
Q 030085           52 KVLHGGVSALIAESLASMGAHMASGFKRVAGVQL-TINHLKSAELGDLVRAVATPINL----------GKTIQVWQVRLW  120 (183)
Q Consensus        52 G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrpa~~Gd~l~a~a~vi~~----------Gr~~~~~~v~i~  120 (183)
                      -.+||-..++++--..   ..  .++.......+ ++.|++|+.+||+|+++++|+..          |+.+..+++++.
T Consensus        66 ~IahG~lt~~l~~~~~---~~--~~~~~~~~~g~~~~rF~~PV~~GDtl~~~~~V~~~~~~~sr~~~~~~g~v~~~~~~~  140 (337)
T 2bi0_A           66 PLAHPGLVCDVAIGQS---TL--ATQRVKANLFYRGLRFHRFPAVGDTLYTRTEVVGLRANSPKPGRAPTGLAGLRMTTI  140 (337)
T ss_dssp             CBCCHHHHHHHHHHHH---TT--TTTTCSEEEEEECEEBSSCCBTTCEEEEEEEEEEEEECCCCTTSCCEEEEEEEEEEE
T ss_pred             ceECHHHHHHHHHHHh---hc--cCccceeeeeeeeEEEeCCccCCCEeEEEEEEEeEEeccccccCCCcEEEEEEEEEE
Confidence            4789988888764332   22  23334444554 39999999999999999998632          224667788887


Q ss_pred             EcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085          121 KVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      +                         ++|++|+.++.+.++.
T Consensus       141 n-------------------------q~G~~V~~~~~~vl~~  157 (337)
T 2bi0_A          141 D-------------------------RTDRLVLDFYRCAMLP  157 (337)
T ss_dssp             C-------------------------TTCCEEEEEEEEEEEE
T ss_pred             e-------------------------CCCCEEEEEEEEEEEe
Confidence            7                         7899999999998853

>2ess_A Acyl-ACP thioesterase; NP_810988.1, structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Bacteroides thetaiotaomicron} SCOP: d.38.1.8 d.38.1.8

Probab=97.03  E-value=0.0052  Score=49.98  Aligned_cols=87  Identities=9%  Similarity=0.041  Sum_probs=69.1

Q ss_pred             EEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEE
Q 030085           39 GCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVR  118 (183)
Q Consensus        39 ~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~  118 (183)
                      ..+++....++.+|.+.=.....+++.+......     ...+-+++.|+|++|+..||.|.+..+++  |++.  ++.+
T Consensus       161 ~~~~vr~~D~D~~gHVnN~~Y~~~~e~a~~~~~~-----~~~~v~~~~i~y~~~~~~~d~l~v~~~~~--~~~~--~~~~  231 (248)
T 2ess_A          161 ATLTAKYSDIDINGHVNSIRYIEHILDLFPIELY-----QTKRIRRFEMAYVAESYFGDELSFFCDEV--SENE--FHVE  231 (248)
T ss_dssp             EEEECCGGGBCTTSBBCHHHHHHHHHTTSCHHHH-----HHCCEEEEEEEECSCCBTTCEEEEEEEEE--ETTE--EEEE
T ss_pred             EEEEeehHHccCcCcccHHHHHHHHHHHhhhhhc-----ccceEEEEEEEEecccCCCCEEEEEEEEE--CCeE--EEEE
Confidence            6788999999999999999999999887432221     12456899999999999999999998885  4432  3556


Q ss_pred             EEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEE
Q 030085          119 LWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTL  159 (183)
Q Consensus       119 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~  159 (183)
                      +++                         ++|+++|.++.++
T Consensus       232 i~~-------------------------~~~~~~a~~~~~w  247 (248)
T 2ess_A          232 VKK-------------------------NGSEVVCRSKVIF  247 (248)
T ss_dssp             EEE-------------------------TTTEEEEEEEEEE
T ss_pred             EEC-------------------------CCCcEEEEEEEEE
Confidence            776                         5789999998876

>3q62_A 3-hydroxydecanoyl-[acyl-carrier-protein] dehydrat; structural genomics, center for structural genomics of infec diseases, csgid; HET: MES; 1.40A {Yersinia pseudotuberculosis} SCOP: d.38.1.2 PDB: 1mka_A* 1mkb_A

Probab=96.93  E-value=0.036  Score=44.25  Aligned_cols=109  Identities=6%  Similarity=-0.067  Sum_probs=69.7

Q ss_pred             EEEEEeCC-------EEEEEEEcCCCCc--C---CCCcccHHHHH--HHHHHHHHHHHHHhcCCceeEEEEE-eEEEecC
Q 030085           28 ELEELTPE-------RIIGCFRVTQNSC--Q---PFKVLHGGVSA--LIAESLASMGAHMASGFKRVAGVQL-TINHLKS   92 (183)
Q Consensus        28 ~~~~~~~g-------~v~~~m~v~~~~~--N---p~G~lHGG~~a--~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrp   92 (183)
                      ++++++++       ++++...+++++-  +   |..-+--|++.  +++-.++.++......+. ..-..+ ++.|.+|
T Consensus        42 rV~~~~~~~G~~g~g~i~a~k~V~~de~fF~GHFp~~PvmPGvl~iE~mAQ~~~~~~~~~~~~~~-~~l~gi~~~kF~~~  120 (175)
T 3q62_A           42 RIVKMIEDGGSHNKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEGK-GRALGVGEVKFTGQ  120 (175)
T ss_dssp             EEEEEETTCTTTTSCEEEEEEECCTTCHHHHHSCTTSCCCCHHHHHHHHHHHHHHHHHHTTCCSE-EEEEEESCEEECCC
T ss_pred             EEEEEecCCCcccceEEEEEEEeCCCCCeecCCCCCCCcCcHHHHHHHHHHHHHHHHhcccCCCc-eEEeeeeEEEEccc
Confidence            77788774       7999999988753  1   11112224433  444444433332211222 222333 6999999


Q ss_pred             CCCCCE-EEEEEEEEEe---CCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEec
Q 030085           93 AELGDL-VRAVATPINL---GKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNL  163 (183)
Q Consensus        93 a~~Gd~-l~a~a~vi~~---Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~  163 (183)
                      +.+||. |+.+.++.+.   .+.+..++++++-                          +|+++|.++.-.....
T Consensus       121 V~PGd~~L~l~v~i~~~~~~~~~~~~~~~~~~v--------------------------dg~~vaea~~l~v~l~  169 (175)
T 3q62_A          121 VLPDAKKVTYRINFKRVIMRKLIMGVADGEVLV--------------------------DGKVIYTATDLKVGLF  169 (175)
T ss_dssp             CCTTCCEEEEEEEEEEEEC--CCEEEEEEEEEE--------------------------TTEEEEEEEEEEEEEE
T ss_pred             ccCCCEEEEEEEEEEEEeccCCCEEEEEEEEEE--------------------------CCEEEEEEEeeEEEEe
Confidence            999998 8999999875   5578899999984                          5899999986555343

>1s9c_A Peroxisomal multifunctional enzyme type 2; hot-DOG fold, hydratase 2 motif, lyase; 3.00A {Homo sapiens} SCOP: d.38.1.4 d.38.1.4 PDB: 2cdh_S

Probab=96.88  E-value=0.012  Score=49.71  Aligned_cols=77  Identities=12%  Similarity=0.047  Sum_probs=53.4

Q ss_pred             CcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCC
Q 030085           52 KVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGR  131 (183)
Q Consensus        52 G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~  131 (183)
                      -++||..+++++-.+..   ....++....-..+++.|.+|+.+||+|+++.++.  + ....+++++ +          
T Consensus       212 ~IahG~~~~~~~~~~~~---~~~~~~~~~~~~~~~~rf~~PV~~Gdtl~~~~~~~--~-~~v~~~~~~-~----------  274 (298)
T 1s9c_A          212 PILHGLCTFGFSARRVL---QQFADNDVSRFKAVKARFAKPVYPGQTLQTEMWKE--G-NRIHFQTKV-Q----------  274 (298)
T ss_dssp             CCCCHHHHHHHHHHHHH---HHHSTTCGGGEEEEEEEECSCCCTTCEEEEEEEEE--T-TEEEEEEEE-T----------
T ss_pred             cccChHHHHHHHHHHHH---HHhccCCceeEEEEEEEEcCCcCCCCEEEEEEEEe--C-CEEEEEEEE-E----------
Confidence            48999999887654321   11122211222457999999999999999988864  3 345566665 4          


Q ss_pred             CCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          132 DHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       132 ~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                                     ++|+++..++.+++
T Consensus       275 ---------------~~g~~v~~~~~~~~  288 (298)
T 1s9c_A          275 ---------------ETGDIVISNAYVDL  288 (298)
T ss_dssp             ---------------TTTEEEEEEEEEEE
T ss_pred             ---------------eCCcEEEEeEEEEE
Confidence                           67999999999887

>2cf2_C Fatty acid synthase, DH domain; transferase, fatty acid metabolism, fatty acid biosynthesis, multienzyme; 4.30A {Sus scrofa} SCOP: d.38.1.2

Probab=96.88  E-value=0.04  Score=47.88  Aligned_cols=109  Identities=8%  Similarity=-0.038  Sum_probs=67.0

Q ss_pred             EEEEEeC-------CEEEEEEEcCCCCcCCCC------cccHHHHH-HHHHHHHHHHHHHhcCCc-eeEEEEEeEEEecC
Q 030085           28 ELEELTP-------ERIIGCFRVTQNSCQPFK------VLHGGVSA-LIAESLASMGAHMASGFK-RVAGVQLTINHLKS   92 (183)
Q Consensus        28 ~~~~~~~-------g~v~~~m~v~~~~~Np~G------~lHGG~~a-~LaD~A~g~a~~~~~~~~-~~vTv~l~i~flrp   92 (183)
                      ++.++++       +++++...+++++--..|      ++.|=.+. +++-.++.++......+. ....++ ++.|.+|
T Consensus       209 rv~~~~~~~g~~~~~~~~a~~~V~~~e~fF~GHFp~~PvmPGvl~iEamaQ~~~~~~~~~~~~~~~~~~gi~-~~kF~~~  287 (342)
T 2cf2_C          209 RVVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEGKGRALGVG-EVKFTGQ  287 (342)
T ss_pred             EEEEEecCCCcccccEEEEEEEeCCCcchhcCCCCCCCcCChHHHHHHHHHHHHHHHhhcccCCceEeeccc-eEEECce
Confidence            5566663       388888888875422223      34443222 233333222221111112 223343 8999999


Q ss_pred             CCCCC-EEEEEEEEEEeC---CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEec
Q 030085           93 AELGD-LVRAVATPINLG---KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNL  163 (183)
Q Consensus        93 a~~Gd-~l~a~a~vi~~G---r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~  163 (183)
                      +.+|| .|+.+.++.+..   +.+..++++++-                          +|+++|+++...+...
T Consensus       288 V~PGd~~L~~~v~~~~~~~~~~~~~~~~~~~~v--------------------------~g~~v~~a~~~~v~l~  336 (342)
T 2cf2_C          288 VLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLV--------------------------DGRLIYTASDLKVGLF  336 (342)
T ss_pred             ecCCCeEEEEEEEEEEEecCCCCEEEEEEEEEE--------------------------CCEEEEEEEeeEEEEe
Confidence            99999 599999998664   668888999884                          5899999986555343

>3cjy_A Putative thioesterase; YP_496845.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE PGE; 1.70A {Novosphingobium aromaticivorans}

Probab=96.82  E-value=0.0093  Score=49.59  Aligned_cols=78  Identities=15%  Similarity=0.134  Sum_probs=61.6

Q ss_pred             HHHHHHHHHH-HHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCC
Q 030085           57 GVSALIAESL-ASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDA  135 (183)
Q Consensus        57 G~~a~LaD~A-~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~  135 (183)
                      -.++.++|.. .++..+. .......|+|++|.|.++- .++.+..+++....+.-....+++|||              
T Consensus       179 ~~la~~sD~~~~~~~~~~-~~~~~~~sld~ti~fhr~~-~~~Wll~~~~s~~a~~Gr~~~~~~i~d--------------  242 (259)
T 3cjy_A          179 ASLAMFADFLPIALGRAT-GCSGGGNSLDNSLRITGAA-APGWCLCDMIIPSSASGFAQGQVTLWD--------------  242 (259)
T ss_dssp             HHHHHHHTTHHHHHHHHH-TCCC--EESEEEEEESCCB-CSSCEEEEEEEEEEETTEEEEEEEEEC--------------
T ss_pred             HHHHHHhcCchhhhhhhc-CCCcceeeeeeeeeeccCC-CCCcEEEEEECcccCCCeEEEEEEEEC--------------
Confidence            6888899987 2222221 2235789999999999995 677899999888888888999999999              


Q ss_pred             CCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          136 DHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       136 ~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                                 .+|++||+++-+.++
T Consensus       243 -----------~~G~lvAs~~Q~~lv  257 (259)
T 3cjy_A          243 -----------QSGRLLATGAQSLLL  257 (259)
T ss_dssp             -----------TTSCEEEEEEEEEEC
T ss_pred             -----------CCCCEEEEEEEEEEE
Confidence                       789999999998874

>3u0a_A Acyl-COA thioesterase II TESB2; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, hydrolase; 2.50A {Mycobacterium marinum}

Probab=96.80  E-value=0.016  Score=49.16  Aligned_cols=87  Identities=10%  Similarity=0.097  Sum_probs=68.5

Q ss_pred             cccHHHHHHHHHHHH-HHHHHHhcC---CceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCC
Q 030085           53 VLHGGVSALIAESLA-SMGAHMASG---FKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSD  128 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~-g~a~~~~~~---~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~  128 (183)
                      .+|=-+++.+.|..+ ..+......   ....++++.+|.|.+|.+.++.+..+++....+.-..+.+++||+       
T Consensus       187 ~~~~~~Lay~sD~~~l~~~~~~~~~~~~~~~~aSLdhti~fhr~~~~d~Wll~~~~s~~a~~Grgl~~g~i~~-------  259 (285)
T 3u0a_A          187 VLHICALAYMSDLTLLGSAQVTHLAEREHLQVASLDHAMWFMRGFRADEWLLYDQSSPSAGGGRALTHGKIFT-------  259 (285)
T ss_dssp             HHHHHHHHHHHHHHGGGGGGTTCTTTGGGCEEEECEEEEEECSCCCTTSCEEEEEEEEEEETTEEEEEEEEEE-------
T ss_pred             HHHHHHHHHHHHHhhHHHHHHhcccCcccceeeeeeEEEEEcCCCCCCceEEEEEEeceecCCeEEEEEEEEC-------
Confidence            478788888899742 111111111   145789999999999998899999999999999999999999999       


Q ss_pred             CCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecC
Q 030085          129 DGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLP  164 (183)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p  164 (183)
                                        .+|+|||++.-.-++..+
T Consensus       260 ------------------~~G~LVAs~~QeglvR~~  277 (285)
T 3u0a_A          260 ------------------QGGELVAAVMQEGLTRYP  277 (285)
T ss_dssp             ------------------TTCCEEEEEEEEEEEECC
T ss_pred             ------------------CCCCEEEEEEeeEEEEec
Confidence                              789999999999986443

>3khp_A MAOC family protein; dehydrogenase, oxidoreductase, structural genomics; HET: TLA; 2.30A {Mycobacterium tuberculosis H37RV}

Probab=96.80  E-value=0.013  Score=50.63  Aligned_cols=78  Identities=12%  Similarity=0.049  Sum_probs=55.5

Q ss_pred             cccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEE---EEcccccCCC
Q 030085           53 VLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRL---WKVKEVQSDD  129 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i---~~~~~~~~~~  129 (183)
                      ++||-.+++++-.+.   .....++....-..+++.|.+|+.+||+|+++.++..  +....+++++   .+        
T Consensus       228 IaHG~~t~~l~~~~~---~~~~~~g~~~~~~~~~~rF~~PV~~Gdtl~~~~~v~~--~g~v~~~~~~~~~~n--------  294 (311)
T 3khp_A          228 ILHGLCTYGVAGRAL---VAELGGGVAANITSIAARFTKPVFPGETLSTVIWRTE--PGRAVFRTEVAGSDG--------  294 (311)
T ss_dssp             CCCHHHHHHHHHHHH---HHHTTTTCGGGEEEEEEEECSCCCTTCCEEEEEEEEE--TTEEEEEEEECC-----------
T ss_pred             EechHHHHHHHHHHH---HHhhccCCcceEEEEEEEEecccCCCCEEEEEEEEEc--CCEEEEEEEEEeeec--------
Confidence            689999998875322   2222233223335789999999999999999999874  5567788888   77        


Q ss_pred             CCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          130 GRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                                       ++|++|..+..+.+
T Consensus       295 -----------------q~G~~Vl~g~~~~~  308 (311)
T 3khp_A          295 -----------------AEARVVLDDGAVEY  308 (311)
T ss_dssp             ------------------CCEEEEEEEEEEE
T ss_pred             -----------------CCCCEEEECeEEEE
Confidence                             67999998888765

>1c8u_A Acyl-COA thioesterase II; internal repeats, hydrolase; HET: LDA; 1.90A {Escherichia coli} SCOP: d.38.1.3 d.38.1.3

Probab=96.53  E-value=0.025  Score=47.52  Aligned_cols=85  Identities=5%  Similarity=0.023  Sum_probs=66.1

Q ss_pred             cccHHHHHHHHHHHHH-HHHHHh-----cCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEccccc
Q 030085           53 VLHGGVSALIAESLAS-MGAHMA-----SGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQ  126 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~g-~a~~~~-----~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~  126 (183)
                      .+|=-+++-+.|..+- .+....     .+.....++|.+|.|.+|.+.++.+..+++....+.-....+++||+     
T Consensus       192 ~~~~~~Lay~sD~~~l~~~~~~~g~~~~~~~~~~asldhti~fhr~~~~~~Wll~~~~s~~a~~Grg~~~g~i~d-----  266 (285)
T 1c8u_A          192 RVHQYLLGYASDLNFLPVALQPHGIGFLEPGIQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYT-----  266 (285)
T ss_dssp             HHHHHHHHHHTTSSSGGGGGGGGTCCTTSTTEEEEEEEEEEEECSCCCTTSCEEEEEEEEEEETTEEEEEEEEEE-----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCcccCCCcceeecceeEEECCCCCCCceEEEEEECccccCceEEEEEEEEC-----
Confidence            4676677777797411 122221     01236889999999999998899999999999888888999999999     


Q ss_pred             CCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085          127 SDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                                          .+|++||++.-..++.
T Consensus       267 --------------------~~G~LVAs~~Qeglvr  282 (285)
T 1c8u_A          267 --------------------QDGVLVASTVQEGVMR  282 (285)
T ss_dssp             --------------------TTCCEEEEEEEEEEEE
T ss_pred             --------------------CCCCEEEEEEEeEEEE
Confidence                                7899999999988854

>4b0b_A 3-hydroxydecanoyl-[acyl-carrier-protein] dehydrat; lyase, fatty acid biosynthesis, bacterial virulence, drug DI; HET: 54F; 1.90A {Pseudomonas aeruginosa} PDB: 4b0c_A* 4b0j_A* 4b8u_A* 4b0i_A*

Probab=96.50  E-value=0.12  Score=41.01  Aligned_cols=109  Identities=4%  Similarity=-0.094  Sum_probs=68.3

Q ss_pred             EEEEEeCC-------EEEEEEEcCCCCc--C---CCCcccHHHHH--HHHHHHHHHHHHHhcCCceeEEEEE-eEEEecC
Q 030085           28 ELEELTPE-------RIIGCFRVTQNSC--Q---PFKVLHGGVSA--LIAESLASMGAHMASGFKRVAGVQL-TINHLKS   92 (183)
Q Consensus        28 ~~~~~~~g-------~v~~~m~v~~~~~--N---p~G~lHGG~~a--~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrp   92 (183)
                      ++++++++       ++++...+++++-  +   |..-+-=|++.  +++-.++.++......+. ..-..+ ++.|.+|
T Consensus        38 rV~~~~~~gG~~g~g~i~a~k~V~~d~~ff~GHFp~~PvmPGvl~iE~mAQ~~~~~~~~~~~~~~-~~~~gi~~~kF~~~  116 (171)
T 4b0b_A           38 RIVHISDVGGKYGKGELVAELDINPDLWFFACHFEGDPVMPGCLGLDAMWQLVGFYLGWQGNPGR-GRALGSGEVKFFGQ  116 (171)
T ss_dssp             EEEEEESSCSTTSSCEEEEEEECCTTCHHHHHSSTTSCCCCHHHHHHHHHHHHHHHHHHTTCCSE-EEEEEESEEEECCC
T ss_pred             EEEEEecCCCcccccEEEEEEEeCCCCCeecCcCCCCCcCcHHHHHHHHHHHHHHHHhcccccCc-eEEeeeeEEEEecC
Confidence            67777764       7999999998752  2   21112224432  344443333322211122 222333 7999999


Q ss_pred             CCCCCE-EEEEEEEEEe---CCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEec
Q 030085           93 AELGDL-VRAVATPINL---GKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNL  163 (183)
Q Consensus        93 a~~Gd~-l~a~a~vi~~---Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~  163 (183)
                      +.+||. ++.+.++.+.   .+.+..++++++-                          +|+++|.++.-.....
T Consensus       117 V~Pgd~~l~l~v~i~~~~~~~~~~~~~~~~~~v--------------------------dg~~vaeae~~~v~l~  165 (171)
T 4b0b_A          117 VLPTAKKVTYNIHIKRTINRSLVLAIADGTVSV--------------------------DGREIYSAEGLRVGLF  165 (171)
T ss_dssp             CCTTCCEEEEEEEEEEEEESSSEEEEEEEEEEE--------------------------TTEEEEEEEEEEEEEE
T ss_pred             ccCCCEEEEEEEEEEEEeecCCCEEEEEEEEEE--------------------------CCEEEEEEEeeEEEEe
Confidence            999997 8899988874   3568889999984                          5899999985544333

>3rd7_A Acyl-COA thioesterase; seattle structur genomics center for infectious disease, ssgcid, hydrolase; 1.95A {Mycobacterium avium}

Probab=96.39  E-value=0.031  Score=47.29  Aligned_cols=84  Identities=13%  Similarity=0.005  Sum_probs=68.2

Q ss_pred             cccHHHHHHHHHHHH-HHHH--HHhcC--CceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccC
Q 030085           53 VLHGGVSALIAESLA-SMGA--HMASG--FKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQS  127 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~-g~a~--~~~~~--~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~  127 (183)
                      .+|=-+++.+.|... ..+.  .....  ....+|+|.+|.|.+|.+..+.+..+.+..+.+.--.+.+++||+      
T Consensus       193 ~~~~~~Lay~sD~~~l~~~l~~~~h~~~~~~~~aSLdhsi~Fh~~~~~d~Wll~~~~s~~a~~gr~~~~g~i~~------  266 (286)
T 3rd7_A          193 LVNSCVVAYLSALTLLECVMTTMRTTPVGPRLSALVDHTIWFHRAADFTDWLLFDQFSPSIVGRRGLATGTLYN------  266 (286)
T ss_dssp             HHHHHHHHHHHHHSTTHHHHHHTTCBTTBSSCEEECEEEEEECSCCCTTSCEEEEEEEEEEETTEEEEEEEEEE------
T ss_pred             HHHHHHHHHHHhhhhHHHHHhhccCCCcccceeeeeeEEEEEeCCCCCCceEEEEEEeceecCceEEEEEEEEC------
Confidence            478889999999742 2222  22211  235799999999999999999999999999999999999999999      


Q ss_pred             CCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          128 DDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                                         .+|+|||+++-.-++
T Consensus       267 -------------------~~G~LVAs~~Qegl~  281 (286)
T 3rd7_A          267 -------------------RSGELVCIATQEGYF  281 (286)
T ss_dssp             -------------------TTSCEEEEEEEEEEE
T ss_pred             -------------------CCCCEEEEEEehhee
Confidence                               789999999988774

>3kh8_A MAOC-like dehydratase; hot DOG domain, lyase; 2.00A {Phytophthora capsici}

Probab=96.37  E-value=0.031  Score=48.69  Aligned_cols=78  Identities=14%  Similarity=0.098  Sum_probs=53.7

Q ss_pred             CcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCC
Q 030085           52 KVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGR  131 (183)
Q Consensus        52 G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~  131 (183)
                      =++||=.+++++-.+.   .....++....-..+++.|++|+.+||+|+++.++.  |+....+++++ +          
T Consensus       247 ~IaHG~~t~al~~~~~---~~~~~~~~~~~~~~~~~rF~~PV~~Gdtl~~~~~~~--~~g~v~~~~~~-~----------  310 (332)
T 3kh8_A          247 PILHGLCSMGVASRAL---FKQFCGGDVARFKSIRVRFSSPCFPGETIQTRMWQE--GSGKVLFQAVV-K----------  310 (332)
T ss_dssp             CCCCHHHHHHHHHHHH---HHHHSTTCGGGEEEEEEEECSCCCTTCEEEEEEEEC--STTEEEEEEEE-T----------
T ss_pred             ceECHHHHHHHHHHHH---HHhhcCCCcceEEEEEEEEecccCCCCEEEEEEEEE--CCCEEEEEEEE-c----------
Confidence            3689999998865332   112223222233478999999999999999999886  44455666666 5          


Q ss_pred             CCCCCCCcCCCCCCCCCCcEEEE-EEEEEE
Q 030085          132 DHDADHHHHNNSTSSSSSIMISS-STVTLL  160 (183)
Q Consensus       132 ~~~~~~~~~~~~~~~~~g~lvA~-~t~T~~  160 (183)
                                     ++|++|.. +++++.
T Consensus       311 ---------------q~g~~Vl~~g~a~~~  325 (332)
T 3kh8_A          311 ---------------ERGAVIVDGGEFVYT  325 (332)
T ss_dssp             ---------------TTTEEEEEEEEEEEC
T ss_pred             ---------------cCCcEEEeCeEEEEe
Confidence                           66788777 777765

>3esi_A Uncharacterized protein; protein from erwinia carotovora subsp. atroseptica (pectobacterium atrosepticum), structural genomics; 2.50A {Pectobacterium atrosepticum}

Probab=95.91  E-value=0.16  Score=38.70  Aligned_cols=79  Identities=10%  Similarity=0.028  Sum_probs=49.4

Q ss_pred             eCCEEEEEEEcCCCCc--C---CCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEE
Q 030085           33 TPERIIGCFRVTQNSC--Q---PFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPIN  107 (183)
Q Consensus        33 ~~g~v~~~m~v~~~~~--N---p~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~  107 (183)
                      +++.+++++.+..++-  +   |..-+-=|+  .++|+++..++..........+++ ++.|.+|+.+||.|+.+.++.+
T Consensus        16 ~~~~~~~~~~v~~~e~~F~GHFPg~PVmPGV--l~iE~~~~~a~~~l~~~~~~~~i~-~vkF~~~V~PGD~l~l~v~~~~   92 (129)
T 3esi_A           16 ETSQVELMLQVDPDLFWFNGHFTGQPLLPGV--AQLDWVMHYATTVLAQGWTFLSIE-NIKFQQPILPGKTLRLVLIWHA   92 (129)
T ss_dssp             SEEEEEEEEECCTTSGGGCTTTBSSCCCCHH--HHHHHHHHHHHHHTCTTEEEEEEE-EEEECSCCCTTCEEEEEEEEET
T ss_pred             CCCEEEEEEEeCCCCchhcCCCCCCCcCCcH--HHHHHHHHHHHHHhcccceeeecc-eeEECcccCCCCEEEEEEEEEe
Confidence            4567888888877653  2   222233344  345554444443322222222222 7999999999999999999999


Q ss_pred             eCCcEEE
Q 030085          108 LGKTIQV  114 (183)
Q Consensus       108 ~Gr~~~~  114 (183)
                      ..+++.|
T Consensus        93 ~~~~l~F   99 (129)
T 3esi_A           93 GKQSLTF   99 (129)
T ss_dssp             TTTEEEE
T ss_pred             cCCcEEE
Confidence            8887665

>1pn2_A Peroxisomal hydratase-dehydrogenase-epimerase; hot-DOG fold, hydratase 2 motif, lyase; 1.95A {Candida tropicalis} SCOP: d.38.1.4 d.38.1.4 PDB: 1pn4_A*

Probab=95.85  E-value=0.069  Score=44.69  Aligned_cols=60  Identities=13%  Similarity=0.056  Sum_probs=40.1

Q ss_pred             CcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEE
Q 030085           52 KVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWK  121 (183)
Q Consensus        52 G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~  121 (183)
                      =++||..+++++-.+..   ...     ..-..+++.|.+|+..||+|+++.+.  .++....+++++.+
T Consensus       201 ~iahG~~~~~~~~~~~~---~~~-----~~~~~~~~rf~~Pv~~Gdtl~~~~~~--~~~g~v~~~~~~~~  260 (280)
T 1pn2_A          201 PILHGMCTYGLSAKALI---DKF-----GMFNEIKARFTGIVFPGETLRVLAWK--ESDDTIVFQTHVVD  260 (280)
T ss_dssp             CCCCHHHHHHHHHHHHH---HHH-----CCEEEEEEEECSCCCTTCEEEEEEEE--CSSSEEEEEEEETT
T ss_pred             cEecHHHHHHHHHHHHH---HHH-----HHHheEEEEEcCCcCCCCEEEEEEEE--eCCCEEEEEEEEEE
Confidence            47999999988643321   111     11245689999999999999999884  33445555555543

>4gak_A Acyl-ACP thioesterase; MCSG, PSI-biology, structural genomics, midwest center for S genomics, hydrolase; HET: MSE; 1.90A {Spirosoma linguale}

Probab=95.72  E-value=0.089  Score=43.06  Aligned_cols=90  Identities=4%  Similarity=-0.104  Sum_probs=66.1

Q ss_pred             EEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEE
Q 030085           37 IIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQ  116 (183)
Q Consensus        37 v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~  116 (183)
                      ..-.++++...+..+|.+.=.....++..+...-..     ....-..+.|+|++++..||.|.+...+...++.+    
T Consensus       160 ~~~~~~vr~~d~D~~gHvNN~~Y~~~~~e~~~~~~~-----~~~~~~~~~i~y~~e~~~gd~l~~~~~~~~~~~~~----  230 (250)
T 4gak_A          160 ASKSVQVGWLNIDQNQHVNNVAYVQWLLEGVDSEIV-----QTREIAEIDLVYRTESHWHDWLSVQSVTETDNSVL----  230 (250)
T ss_dssp             CCEEEECCGGGBCTTSSBCHHHHHHHHHHTSCHHHH-----HHCCEEEEEEEECSCCCTTCEEEEEEEEEETTEEE----
T ss_pred             eeEEEEeCHHHcCccCcccHHHHHHHHHHHhhHHHH-----HhcCeeEEEEEEcccCCCCCEEEEEEEEecCCeEE----
Confidence            445788888899999999999998886443222211     12345678999999999999999998887766432    


Q ss_pred             EEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEE
Q 030085          117 VRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTL  159 (183)
Q Consensus       117 v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~  159 (183)
                      .+|...                        ++|+++|.|+.+|
T Consensus       231 ~~i~~~------------------------~dg~~~~~a~t~W  249 (250)
T 4gak_A          231 HRISQT------------------------ESGKDVLLARSRW  249 (250)
T ss_dssp             EEEEET------------------------TTCCEEEEEEEEE
T ss_pred             EEEEEC------------------------CCCcEEEEEEEEE
Confidence            345541                        6799999999876

>2cf2_C Fatty acid synthase, DH domain; transferase, fatty acid metabolism, fatty acid biosynthesis, multienzyme; 4.30A {Sus scrofa} SCOP: d.38.1.2

Probab=94.75  E-value=1.8  Score=37.30  Aligned_cols=103  Identities=5%  Similarity=-0.046  Sum_probs=63.7

Q ss_pred             EEEEEeC-------CEEEEEEEcCCCCc--CC----CCcccHHHHH-HHHHHHHHHHHHHhcCCceeEEEEE-eEEEecC
Q 030085           28 ELEELTP-------ERIIGCFRVTQNSC--QP----FKVLHGGVSA-LIAESLASMGAHMASGFKRVAGVQL-TINHLKS   92 (183)
Q Consensus        28 ~~~~~~~-------g~v~~~m~v~~~~~--Np----~G~lHGG~~a-~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrp   92 (183)
                      ++.++++       ++++....+++++-  +.    ...+=|=++. +++-.++.++....... ...-..+ ++.|.+|
T Consensus        38 rv~~~~~~~G~~~~~~i~a~~~V~~d~~ff~gHFp~~PvmPGvl~iE~maQ~~~~~~~~~~~~~-~~~l~gi~~~kF~~~  116 (342)
T 2cf2_C           38 RVVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEG-KGRALGVGEVKFTGQ  116 (342)
T ss_pred             EEEEEecCCCcccCCEEEEEEEeCCCcceecCCCCCCCcCchHHHHHHHHHHHHHHHhhccCCC-cEEEEEcCEEEECce
Confidence            5566653       68888888877653  21    2233333222 23333322222211111 1222333 7999999


Q ss_pred             CCCCCE-EEEEEEEEEe---CCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEE
Q 030085           93 AELGDL-VRAVATPINL---GKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTV  157 (183)
Q Consensus        93 a~~Gd~-l~a~a~vi~~---Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~  157 (183)
                      +.+||. ++.+.++.+.   .+.+..++++++-                          +|+++|+++.
T Consensus       117 v~Pgd~~l~l~v~i~~~~~~~~~~~~~~~~~~v--------------------------~g~~va~a~~  159 (342)
T 2cf2_C          117 VLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLV--------------------------DGRLIYTASD  159 (342)
T ss_pred             ecCCCEEEEEEEEEEEeecCCCCEEEEEEEEEE--------------------------CCEEEEEEEE
Confidence            999999 8899999887   5678889999884                          5899999984

>2bi0_A Hypothetical protein RV0216; conserved hypothetical, hotdog-fold, structural proteomics in europe, spine, structural genomics; 1.9A {Mycobacterium tuberculosis} SCOP: d.38.1.4 d.38.1.4

Probab=94.61  E-value=0.34  Score=41.92  Aligned_cols=75  Identities=8%  Similarity=0.006  Sum_probs=49.5

Q ss_pred             cCCCCcC----CCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEe--C--CcEEE
Q 030085           43 VTQNSCQ----PFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINL--G--KTIQV  114 (183)
Q Consensus        43 v~~~~~N----p~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~--G--r~~~~  114 (183)
                      .++-|.|    ..-.+||+..++++=-   +..... .+.....--.+++|++|+.+||+|+++++|+..  -  +.+..
T Consensus       233 ~~p~H~D~e~~g~~ia~G~~t~s~~~~---l~~~~~-~~~~~~~g~~~~r~~~PV~~GDtl~~~~eV~~~~~~~~~g~v~  308 (337)
T 2bi0_A          233 IAATHHDWRVSGRRLVYGGHTIGLALA---QATRLL-PNLATVLDWESCDHTAPVHEGDTLYSELHIESAQAHADGGVLG  308 (337)
T ss_dssp             CCGGGTCTTTTSSCCCCHHHHHHHHHH---HHHHHS-TTCCEEEEEEEEEECSCCCTTCEEEEEEEEEEEEECSSSEEEE
T ss_pred             CCCeEeCCCCCCCceeehHHHHHHHHH---HHHHhc-cchhhhccccceEecCCcCCCCEEEEEEEEEEeEEcCCCCEEE
Confidence            4455665    3457899988888533   333222 222121222579999999999999999999643  2  56667


Q ss_pred             EEEEEEE
Q 030085          115 WQVRLWK  121 (183)
Q Consensus       115 ~~v~i~~  121 (183)
                      ++.+++|
T Consensus       309 ~~~~~~n  315 (337)
T 2bi0_A          309 LRSLVYA  315 (337)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEe
Confidence            7778887

>3bbj_A Putative thioesterase II; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.16A {Thermobifida fusca}

Probab=94.19  E-value=0.15  Score=42.26  Aligned_cols=81  Identities=12%  Similarity=0.020  Sum_probs=60.7

Q ss_pred             cccHHHHH-HHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCC
Q 030085           53 VLHGGVSA-LIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGR  131 (183)
Q Consensus        53 ~lHGG~~a-~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~  131 (183)
                      .+|--+++ .++|.... +...........++++++.|.|+. .++.+..+++....+.-....+++|||          
T Consensus       188 ~~~~~~l~a~~sD~~~~-~~~~~~~~~~~p~ldlt~~fhr~~-~~~Wll~~~~s~~a~~Grg~~~~~i~d----------  255 (272)
T 3bbj_A          188 AKDPLAFLPLAVDALPP-IVSLLVDWSWAPTVELTWHLRAIP-EPGPLAFRSTCALVSDGWFDENVDLWD----------  255 (272)
T ss_dssp             CSSHHHHHHHHTTCSCC-GGGGTSSCSCCCEEEEEEEECSCC-CSSCEEEEEECSEEETTEEEEEEEEEC----------
T ss_pred             CCCHHHHHHHhhhcCcc-ceeccCCCCccceEEEEEEEEccC-CCCeEEEEEEEEEecCCcEeeeEEEEC----------
Confidence            34444444 88897643 222221113366999999999996 577899888888888888999999999          


Q ss_pred             CCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          132 DHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       132 ~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                                     .+|+|||+++-+.+
T Consensus       256 ---------------~~G~LvA~~~Qe~l  269 (272)
T 3bbj_A          256 ---------------ARGRLVAQSRQLAR  269 (272)
T ss_dssp             ---------------TTSCEEEEEEEEEE
T ss_pred             ---------------CCCCEEEEEeeeee
Confidence                           78999999998876

>1pn2_A Peroxisomal hydratase-dehydrogenase-epimerase; hot-DOG fold, hydratase 2 motif, lyase; 1.95A {Candida tropicalis} SCOP: d.38.1.4 d.38.1.4 PDB: 1pn4_A*

Probab=93.79  E-value=0.49  Score=39.41  Aligned_cols=60  Identities=13%  Similarity=0.111  Sum_probs=48.6

Q ss_pred             ceeEEEEEeEEEec-CCCCCCEEEEEEEEEEe---C-CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCC-CCcE
Q 030085           78 KRVAGVQLTINHLK-SAELGDLVRAVATPINL---G-KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSS-SSIM  151 (183)
Q Consensus        78 ~~~vTv~l~i~flr-pa~~Gd~l~a~a~vi~~---G-r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~l  151 (183)
                      ...+=.+-.+.|.+ |+..|+++.+++++...   | ..+.+++.++++                         + +|++
T Consensus        69 ~~~vH~~q~~~~~r~Pl~~g~~l~~~~~v~~v~~kg~g~~v~~~~~~~~-------------------------~~~Ge~  123 (280)
T 1pn2_A           69 MLLLHGEHYLKVHSWPPPTEGEIKTTFEPIATTPKGTNVVIVHGSKSVD-------------------------NKSGEL  123 (280)
T ss_dssp             GGEEEEEEEEEECSSSCCSSEEEEEEEEEEEEEEETTEEEEEEEEEEEE-------------------------TTTCCE
T ss_pred             hheEEeeEEEEEEcCCCCCCCEEEEEEEEEEEEECCCcEEEEEEEEEEe-------------------------CCCCcE
Confidence            45788888999999 99999999999987743   3 345666778887                         4 7999


Q ss_pred             EEEEEEEEEEe
Q 030085          152 ISSSTVTLLCN  162 (183)
Q Consensus       152 vA~~t~T~~~~  162 (183)
                      +++.+.|+++.
T Consensus       124 v~~~~~t~~~R  134 (280)
T 1pn2_A          124 IYSNEATYFIR  134 (280)
T ss_dssp             EEEEEEEEEET
T ss_pred             EEEEEEEEEEe
Confidence            99999999964

>4e3e_A MAOC domain protein dehydratase; structural genomics, protein structure initiative, nysgrc, PSI-biology; 1.90A {Chloroflexus aurantiacus}

Probab=93.73  E-value=0.58  Score=40.54  Aligned_cols=65  Identities=15%  Similarity=0.006  Sum_probs=46.0

Q ss_pred             cccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEe-------CCcEEEEEEEEEE
Q 030085           53 VLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINL-------GKTIQVWQVRLWK  121 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~-------Gr~~~~~~v~i~~  121 (183)
                      .+||...++|+-.+..   .. .+.....--..++.|.+|+..||+|+++.+|+..       |+.+..++++++|
T Consensus       247 iahG~~t~~l~~~~~~---~~-~~~~~~~~g~~~~rf~~PV~~GDtl~~~~~V~~~~~~~~~~~~g~V~~~~~~~n  318 (352)
T 4e3e_A          247 IVYGGHIISLARSLSF---NG-LANALSIAAINSGRHTNPSFAGDTIYAWSEILAKMAIPGRTDIGALRVRTVATK  318 (352)
T ss_dssp             CCCHHHHHHHHHHHHH---HH-HTTCCEEEEEEEEECCSCCCTTCEEEEEEEEEEEEECTTCSSEEEEEEEEEEEE
T ss_pred             EECHHHHHHHHHHHhh---cc-ccchheeeeeeeEEEECCccCCCEEEEEEEEEEEEecCCCCCccEEEEEEEEEe
Confidence            6899999999854432   21 1222222223489999999999999999998844       2357788888887

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=93.07  E-value=0.74  Score=42.53  Aligned_cols=77  Identities=10%  Similarity=-0.019  Sum_probs=49.9

Q ss_pred             CcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCC
Q 030085           52 KVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGR  131 (183)
Q Consensus        52 G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~  131 (183)
                      =++||=.+++++=.+   ......++....-...++.|.+|+.+||+|+++.+.  .++ ...+++++.           
T Consensus       522 ~IahG~~t~~~~~~~---~~~~~~~~~~~~~~~~~~rf~~PV~~gd~l~~~~~~--~~~-~v~~~~~~~-----------  584 (613)
T 3oml_A          522 PILHGLCTLGFSVRA---VLAQFADNNPALFKAVKVRFSGPVIPGQTLRVDLWK--QGT-RINFRTVVV-----------  584 (613)
T ss_dssp             CCCCHHHHHHHHHHH---HHHHHSTTCGGGEEEEEEEECSCCCTTCEEEEEEEE--ETT-EEEEEEEET-----------
T ss_pred             ceecHHHHHHHHHHH---HHhhhcCCCceeEEEEEEEEcCCCCCCCEEEEEEEE--CCC-EEEEEEEEE-----------
Confidence            378999888874332   222223333344456799999999999999988864  333 333333332           


Q ss_pred             CCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          132 DHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       132 ~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                                     ++|+++..+....+
T Consensus       585 ---------------~~g~~vl~g~~~~l  598 (613)
T 3oml_A          585 ---------------ETGKEVISGAYVDL  598 (613)
T ss_dssp             ---------------TTCCEEEEEEEEEE
T ss_pred             ---------------ECCcEEEECeEEEE
Confidence                           46888888877766

>3khp_A MAOC family protein; dehydrogenase, oxidoreductase, structural genomics; HET: TLA; 2.30A {Mycobacterium tuberculosis H37RV}

Probab=92.98  E-value=0.34  Score=41.55  Aligned_cols=60  Identities=15%  Similarity=0.047  Sum_probs=47.0

Q ss_pred             ceeEEEEEeEEEecCCCCCCEEEEEEEEEEe----CC--cEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcE
Q 030085           78 KRVAGVQLTINHLKSAELGDLVRAVATPINL----GK--TIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIM  151 (183)
Q Consensus        78 ~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~----Gr--~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l  151 (183)
                      ...+=.+-.+.|.||++.|+.+++++++...    |+  .+.+++.++++                         .+|++
T Consensus        97 ~~lvH~eq~i~~~rPl~~g~~l~~~~~v~~v~dk~gg~g~~v~~~~~~~d-------------------------~~Ge~  151 (311)
T 3khp_A           97 AALLHGSQGIRLHAPLPAAGKLSVVTEVADIQDKGEGKNAIVVLRGRGCD-------------------------PESGS  151 (311)
T ss_dssp             TCCTTCEEEEEESSCCCSSEEEEEEEEEEEEEECCTTSCEEEEEEEEEEC-------------------------TTTCC
T ss_pred             cceEEcCceEEEECCCCCCCEEEEEEEEEEEEEecCCceEEEEEEEEEEc-------------------------CCCCE
Confidence            4566677899999999999999999888743    22  35666777776                         67999


Q ss_pred             EEEEE-EEEEEe
Q 030085          152 ISSST-VTLLCN  162 (183)
Q Consensus       152 vA~~t-~T~~~~  162 (183)
                      +++.+ .|+++.
T Consensus       152 v~~~~~st~~~R  163 (311)
T 3khp_A          152 LVAETLTTLVLR  163 (311)
T ss_dssp             EEEEEEEEEEET
T ss_pred             EEEEEeeEEEEE
Confidence            99999 998854

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=90.47  E-value=1.2  Score=41.09  Aligned_cols=60  Identities=5%  Similarity=0.003  Sum_probs=48.2

Q ss_pred             ceeEEEEEeEEEecCCCCCCEEEEEEEEEE----eCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEE
Q 030085           78 KRVAGVQLTINHLKSAELGDLVRAVATPIN----LGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMIS  153 (183)
Q Consensus        78 ~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~----~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA  153 (183)
                      ...+=.+-.+.|.||++.|+.+++++++..    .+..+.++++++++                         .+|++++
T Consensus       393 ~~lvH~eq~i~~~rPl~~g~~l~~~~~v~~v~dk~~G~~v~~~~~~~d-------------------------~~Ge~v~  447 (613)
T 3oml_A          393 SNILHGEQYLEIVDDLPTSGTLLTNGKVFDVMDKGSGAVVVTNSESFD-------------------------ESGRLLV  447 (613)
T ss_dssp             --CEEEEEEEEECSCCCSSEEEEEEEEEEEEEECSSCEEEEEEEEEEC-------------------------SSCCEEE
T ss_pred             HHccccceEEEEEcCCCCCCeEEEEEEEEEEEEcCCceEEEEEEEEEC-------------------------CCCCEEE
Confidence            346778889999999999999999988763    34466777788876                         6799999


Q ss_pred             EEEEEEEEe
Q 030085          154 SSTVTLLCN  162 (183)
Q Consensus       154 ~~t~T~~~~  162 (183)
                      +.+.|+++.
T Consensus       448 ~~~~t~~~R  456 (613)
T 3oml_A          448 RNQSTTFIV  456 (613)
T ss_dssp             EEEEEEEEC
T ss_pred             EEEEEEEEe
Confidence            999999964

>1s9c_A Peroxisomal multifunctional enzyme type 2; hot-DOG fold, hydratase 2 motif, lyase; 3.00A {Homo sapiens} SCOP: d.38.1.4 d.38.1.4 PDB: 2cdh_S

Probab=89.71  E-value=2.1  Score=35.73  Aligned_cols=58  Identities=10%  Similarity=0.126  Sum_probs=43.7

Q ss_pred             eeEEEEEeEEEecCCCCCCEEEEEEEEEEe----CCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEE
Q 030085           79 RVAGVQLTINHLKSAELGDLVRAVATPINL----GKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISS  154 (183)
Q Consensus        79 ~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~----Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~  154 (183)
                      ..+=.+-.+.|.+|+..|+++++++++...    +..+..++.++++                          +|++|++
T Consensus        86 ~~vH~~q~~~~~rPl~~g~~l~~~~~v~~v~~k~~G~~v~~~~~~~~--------------------------~Ge~v~~  139 (298)
T 1s9c_A           86 KVLHGEQYLELYKPLPRAGKLKCEAVVADVLDKGSGVVIIMDVYSYS--------------------------EKELICH  139 (298)
T ss_dssp             -CEEEEEEEEESSCCCSSEEEEEEEEEEEEC-----CEEEEEEEEES--------------------------SSSEEEE
T ss_pred             HeeecceEEEEEccCCCCCEEEEEEEEEEEEECCCceEEEEEEEEEe--------------------------CCeEEEE
Confidence            456678899999999999999999998854    3345566666663                          5899999


Q ss_pred             EEEEEEEe
Q 030085          155 STVTLLCN  162 (183)
Q Consensus       155 ~t~T~~~~  162 (183)
                      .+.++++.
T Consensus       140 ~~~~~~~R  147 (298)
T 1s9c_A          140 NQFSLFLV  147 (298)
T ss_dssp             EEEEEEC-
T ss_pred             EEEEEEEe
Confidence            99888854

>3kh8_A MAOC-like dehydratase; hot DOG domain, lyase; 2.00A {Phytophthora capsici}

Probab=89.56  E-value=1.9  Score=37.31  Aligned_cols=60  Identities=8%  Similarity=0.048  Sum_probs=47.0

Q ss_pred             ceeEEEEEeEEEecCC-CCCCEEEEEEEEEEe----CCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEE
Q 030085           78 KRVAGVQLTINHLKSA-ELGDLVRAVATPINL----GKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMI  152 (183)
Q Consensus        78 ~~~vTv~l~i~flrpa-~~Gd~l~a~a~vi~~----Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lv  152 (183)
                      ...+=.+-.|.|.||+ +.|+.+++++++...    ...+.+++++ .+                         .+|++|
T Consensus       121 ~~lVHgeq~i~~~rPl~~~g~~l~~~s~v~~v~dk~~G~lv~v~~~-~~-------------------------~~Gelv  174 (332)
T 3kh8_A          121 AMILHGEQSVEILRPLDPSGGTLTGKTKVISFYDKGKGTLMETQTQ-FE-------------------------DGNGPV  174 (332)
T ss_dssp             TSEEEEEEEEEESSCCCTTCEEEEEEEEEEEEEECSSEEEEEEEEE-EE-------------------------ETTEEE
T ss_pred             cceEEeccEEEEecCCCCCCCEEEEEEEEEEEEEcCCceEEEEEEE-Ec-------------------------cCCeEE
Confidence            4578889999999999 999999999988643    2345555665 43                         579999


Q ss_pred             EEEEEEEEEec
Q 030085          153 SSSTVTLLCNL  163 (183)
Q Consensus       153 A~~t~T~~~~~  163 (183)
                      ++.+.|+++.-
T Consensus       175 ~~~~st~~~Rg  185 (332)
T 3kh8_A          175 AKLISGSFIRG  185 (332)
T ss_dssp             EEEEEEEEEES
T ss_pred             EEEEEEEEEEc
Confidence            99999998653

>4b8u_A 3-hydroxydecanoyl-[acyl-carrier-protein] dehydrat; lyase, fatty acid biosynthesis, inhibitor, bacterial virulen discovery; HET: IBK; 2.76A {Pseudomonas aeruginosa}

Probab=86.90  E-value=10  Score=30.03  Aligned_cols=110  Identities=6%  Similarity=-0.038  Sum_probs=64.0

Q ss_pred             EEEEEeC-------CEEEEEEEcCCCC--c--C-CCCcccHHHHH--HHHHHHHHHHHHHhcCCceeEEEEE-eEEEecC
Q 030085           28 ELEELTP-------ERIIGCFRVTQNS--C--Q-PFKVLHGGVSA--LIAESLASMGAHMASGFKRVAGVQL-TINHLKS   92 (183)
Q Consensus        28 ~~~~~~~-------g~v~~~m~v~~~~--~--N-p~G~lHGG~~a--~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrp   92 (183)
                      +++++++       |++++...++++.  .  . |..-+--|++.  +++=. +++.+..........-+.+ ++.|.++
T Consensus        38 rV~~i~~~gG~~g~G~i~a~k~V~~dewfF~gHFp~~PVMPGvL~~EamaQ~-~~~~l~~~~~~~~~~~~~i~~~kFr~~  116 (171)
T 4b8u_A           38 RIVHISDVGGKYGKGELVAELDINPDLWFFACHFEGDPVMPGCLGLDAMWQL-VGFYLGWQGNPGRGRALGSGEVKFFGQ  116 (171)
T ss_dssp             EEEEEESSBSTTSBCEEEEEEECCTTSHHHHHSCTTSCCCCHHHHHHHHHHH-HHHHHHHTTCCSEEEEEEESCEEECCC
T ss_pred             EEEEEecCCCceeccEEEEEEeeCCCCCeEeccCCCCCCCCccHHHHHHHHH-hhhhhccccCCCeeEEeccceeEEEee
Confidence            6777765       3799999988863  1  1 22233344443  33333 3332222222222223333 6999999


Q ss_pred             CCCCCE-EEEEEE---EEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecC
Q 030085           93 AELGDL-VRAVAT---PINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLP  164 (183)
Q Consensus        93 a~~Gd~-l~a~a~---vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p  164 (183)
                      +.+||. |+.+.+   +++.++.+...+++++-                          +|++|++++--..-..+
T Consensus       117 V~Pgd~lv~~ei~i~~v~~~~~~~~~~dg~~~V--------------------------DG~~v~eA~dl~vglf~  166 (171)
T 4b8u_A          117 VLPTAKKVTYNIHIKRTINRSLVLAIADGTVSV--------------------------DGREIYSAEGLRVGLFT  166 (171)
T ss_dssp             CCTTCCEEEEEEEEEEEECSSSEEEEEEEEEEE--------------------------TTEEEEEEEEEEEEEES
T ss_pred             ECCCCEEEEEEEEEEEEEeCCceEEEEEEEEEE--------------------------CCEEEEEEeCcEEEEec
Confidence            999984 344443   34445567888888884                          69999999865553343

>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*

Probab=81.90  E-value=14  Score=39.54  Aligned_cols=64  Identities=11%  Similarity=0.069  Sum_probs=40.0

Q ss_pred             cccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEE--eCCcEEEEEEEEEE
Q 030085           53 VLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPIN--LGKTIQVWQVRLWK  121 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~--~Gr~~~~~~v~i~~  121 (183)
                      ++||=..++++-.+   ......++....-++.+++|.+|+.+||+|+++.+.+-  .|+.  .++.+.++
T Consensus      1579 IAHGmlt~al~~~l---l~~~~~~~~~~~~~~~~vRF~~PV~~GDtLrv~vehvgm~~gr~--~v~Lea~n 1644 (2051)
T 2uv8_G         1579 ITHGMFSSASVRAL---IENWAADSVSSRVRGYTCQFVDMVLPNTALKTSIQHVGMINGRK--LIKFETRN 1644 (2051)
T ss_dssp             CCCHHHHHHHHHHH---HHHHHSTTCGGGEEEEEEEECSCCCSSCEEEEEEEEEEEETTEE--EEEEEEEC
T ss_pred             ccchHHHHHHHHHH---HHHhcccCcchhhhhHhhhhccccccccccccceeeeeeeccCc--eEEEEEEc
Confidence            67887777774322   22112222233445668999999999999988887764  3554  34455555

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	183
d1vh9a_	138	d.38.1.5 (A:) Hypothetical protein YbdB {Escherich	1e-15
d2f0xa1	136	d.38.1.5 (A:3-138) Hypothetical protein Them2 {Hum	2e-15
d2fs2a1	131	d.38.1.5 (A:1-131) Phenylacetic acid degradation p	1e-14
d1sc0a_	137	d.38.1.5 (A:) Hypothetical protein HI1161 {Haemoph	3e-14
d1vh5a_	138	d.38.1.5 (A:) Hypothetical protein YdiI {Escherich	6e-14
d1zkia1	126	d.38.1.5 (A:4-129) Hypothetical protein PA5202 {Ps	1e-13
d1wlua1	116	d.38.1.5 (A:2-117) Phenylacetic acid degradation p	4e-13
d2hboa1	142	d.38.1.5 (A:12-153) Hypothetical protein CC3309 {C	3e-11
d1yoca1	145	d.38.1.5 (A:1-145) Hypothetical protein PA1835 {Ps	2e-10
d1ixla_	130	d.38.1.5 (A:) Hypothetical protein PH1136 {Archaeo	8e-10
d1q4ua_	140	d.38.1.5 (A:) 4-hydroxybenzoyl CoA thioesterase {A	2e-09

>d1vh9a_ d.38.1.5 (A:) Hypothetical protein YbdB {Escherichia coli [TaxId: 562]} Length = 138

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein YbdB
species: Escherichia coli [TaxId: 562]

 Score = 68.0 bits (166), Expect = 1e-15
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 2/100 (2%)

Query: 22  LKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAH-MASGFKRV 80
           +  +G     L  + +     V   + QPF +LHGG SA +AE+L SM    M    + V
Sbjct: 22  VAHLGIVYTRLGDDVLEAEMPVDTRTHQPFGLLHGGASAALAETLGSMAGFMMTRDGQCV 81

Query: 81  AGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW 120
            G +L   H +    G + R V  P++LG+  Q W++ ++
Sbjct: 82  VGTELNATHHRPVSEGKV-RGVCQPLHLGRQNQSWEIVVF 120

>d2f0xa1 d.38.1.5 (A:3-138) Hypothetical protein Them2 {Human (Homo sapiens) [TaxId: 9606]} Length = 136

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein Them2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.3 bits (164), Expect = 2e-15
 Identities = 21/95 (22%), Positives = 41/95 (43%)

Query: 26  GFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL 85
              L    P ++I   +V +        LHGG++A + +++++M             V +
Sbjct: 25  KITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDM 84

Query: 86  TINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW 120
            I ++  A+LG+ +   A  +  GKT+    V L 
Sbjct: 85  NITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLT 119

>d2fs2a1 d.38.1.5 (A:1-131) Phenylacetic acid degradation protein PaaI {Escherichia coli [TaxId: 562]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Phenylacetic acid degradation protein PaaI
species: Escherichia coli [TaxId: 562]

 Score = 65.0 bits (158), Expect = 1e-14
 Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 2/102 (1%)

Query: 19  DAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFK 78
           DA  KA+G ++  +     +    VT       +  HGG    +A++  +   +      
Sbjct: 16  DACAKALGIDIISMDEGFAVVTMTVTAQMLNGHQSCHGGQLFSLADTAFAYACNSQG--L 73

Query: 79  RVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW 120
                  TI+ L+    GD + A A   + GK   V+ + + 
Sbjct: 74  AAVASACTIDFLRPGFAGDTLTATAQVRHQGKQTGVYDIEIV 115

>d1sc0a_ d.38.1.5 (A:) Hypothetical protein HI1161 {Haemophilus influenzae [TaxId: 727]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein HI1161
species: Haemophilus influenzae [TaxId: 727]

 Score = 64.3 bits (156), Expect = 3e-14
 Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 2/100 (2%)

Query: 22  LKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKR-V 80
           +  +G E+     + I     V   + QPF VLHGGVS  +AE++ S+   +     + V
Sbjct: 20  VSHLGIEISAFGEDWIEATMPVDHRTMQPFGVLHGGVSVALAETIGSLAGSLCLEEGKTV 79

Query: 81  AGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW 120
            G+ +  NHL+    G  V A ATPINLG+ IQVWQ+ + 
Sbjct: 80  VGLDINANHLRPVRSGK-VTARATPINLGRNIQVWQIDIR 118

>d1vh5a_ d.38.1.5 (A:) Hypothetical protein YdiI {Escherichia coli [TaxId: 562]} Length = 138

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein YdiI
species: Escherichia coli [TaxId: 562]

 Score = 63.5 bits (154), Expect = 6e-14
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 2/100 (2%)

Query: 22  LKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASM-GAHMASGFKRV 80
           +  +    E +  + +     V   + QPF +LHGG S ++AES+ S+ G     G ++V
Sbjct: 22  VGFLDIRFEHIGDDTLEATMPVDSRTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKV 81

Query: 81  AGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW 120
            G+++  NH++SA  G  VR V  P++LG   QVWQ+ ++
Sbjct: 82  VGLEINANHVRSAREGR-VRGVCKPLHLGSRHQVWQIEIF 120

>d1zkia1 d.38.1.5 (A:4-129) Hypothetical protein PA5202 {Pseudomonas aeruginosa [TaxId: 287]} Length = 126

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein PA5202
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 62.3 bits (151), Expect = 1e-13
 Identities = 14/99 (14%), Positives = 38/99 (38%), Gaps = 2/99 (2%)

Query: 23  KAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLAS-MGAHMASGFKRVA 81
           + +G +   L          +  +      V+HGG    + +       +      ++  
Sbjct: 13  ELVGLDPVSLGDGVAEVRLPMAAHLRNRGGVMHGGALFSLMDVTMGLACSSSHGFDRQSV 72

Query: 82  GVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW 120
            ++  IN++++   G++ R VA  ++ G+   V +  + 
Sbjct: 73  TLECKINYIRAVADGEV-RCVARVLHAGRRSLVVEAEVR 110

>d1wlua1 d.38.1.5 (A:2-117) Phenylacetic acid degradation protein PaaI {Thermus thermophilus [TaxId: 274]} Length = 116

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Phenylacetic acid degradation protein PaaI
species: Thermus thermophilus [TaxId: 274]

 Score = 60.8 bits (147), Expect = 4e-13
 Identities = 18/102 (17%), Positives = 41/102 (40%), Gaps = 3/102 (2%)

Query: 19  DAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFK 78
           D  ++A+G ++  L P   +    V  +        HGG    +A+S  ++ ++      
Sbjct: 2   DPFMEALGLKVLHLAPGEAVVAGEVRADHLNLHGTAHGGFLYALADSAFALASNT---RG 58

Query: 79  RVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW 120
               +   +++ +    G  V A A  +NL +    ++V + 
Sbjct: 59  PAVALSCRMDYFRPLGAGARVEARAVEVNLSRRTATYRVEVV 100

>d2hboa1 d.38.1.5 (A:12-153) Hypothetical protein CC3309 {Caulobacter crescentus [TaxId: 155892]} Length = 142

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein CC3309
species: Caulobacter crescentus [TaxId: 155892]

 Score = 56.2 bits (135), Expect = 3e-11
 Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 1/95 (1%)

Query: 26  GFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL 85
                   P +    FRV ++        HGG+    A+        +   +  V  V+L
Sbjct: 21  PLFEHREGPGQARLAFRVEEHHTNGLGNCHGGMLMSFADMAWGRIISLQKSYSWV-TVRL 79

Query: 86  TINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW 120
             + L  A+LGD V      I+    +   + R+W
Sbjct: 80  MCDFLSGAKLGDWVEGEGELISEEDMLFTVRGRIW 114

>d1yoca1 d.38.1.5 (A:1-145) Hypothetical protein PA1835 {Pseudomonas aeruginosa [TaxId: 287]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein PA1835
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 54.3 bits (130), Expect = 2e-10
 Identities = 19/115 (16%), Positives = 31/115 (26%), Gaps = 2/115 (1%)

Query: 5   SSSNSKQRKRIAVPDAP-LKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIA 63
                 Q   +    AP   +I  +  EL P      F   +        +H       A
Sbjct: 9   QQVGPAQFSAMIGQFAPYFASIAPQFVELRPGYAEVTFPKRREVLNHIGTVHAIALCNAA 68

Query: 64  ESLASMGAHMASG-FKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQV 117
           E  A      +     R     +T+ +L  A       A  + I+   T  +   
Sbjct: 69  ELAAGTMTDASIPAGHRWIPRGMTVEYLAKATGDVRAVADGSQIDWQATGNLVVP 123

>d1ixla_ d.38.1.5 (A:) Hypothetical protein PH1136 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein PH1136
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score = 52.3 bits (125), Expect = 8e-10
 Identities = 15/107 (14%), Positives = 34/107 (31%), Gaps = 5/107 (4%)

Query: 15  IAVPDAPLKAIGFELEELTPERIIGCFRVTQN-SCQPFKVLHGGVSALIAESLASMGAHM 73
                   + +  +   +                     ++HGG +      LA   A +
Sbjct: 6   QRTHKLTSRILVGKPILIKEGYAEVELETIDEMKVDEKGLVHGGFTF----GLADYAAML 61

Query: 74  ASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW 120
           A     V   +  +   K  ++GD + A A  I      ++ +V+++
Sbjct: 62  AVNEPTVVLGKAEVRFTKPVKVGDKLVAKAKIIEDLGKKKIVEVKVY 108

>d1q4ua_ d.38.1.5 (A:) 4-hydroxybenzoyl CoA thioesterase {Arthrobacter sp., strain su [TaxId: 1667]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: 4-hydroxybenzoyl CoA thioesterase
species: Arthrobacter sp., strain su [TaxId: 1667]

 Score = 51.7 bits (123), Expect = 2e-09
 Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 1/108 (0%)

Query: 14  RIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLAS-MGAH 72
            +A        +GF ++E+TPER      VT    Q + ++HGG    +AE LA+     
Sbjct: 13  PVAYEQTLDGTVGFVIDEMTPERATASVEVTDTLRQRWGLVHGGAYCALAEMLATEATVA 72

Query: 73  MASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW 120
           +      +A  Q              VRA A  I+ G T   W V L 
Sbjct: 73  VVHEKGMMAVGQSNHTSFFRPVKEGHVRAEAVRIHAGSTTWFWDVSLR 120

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	183
d1vh9a_	138	Hypothetical protein YbdB {Escherichia coli [TaxId	99.98
d1q4ua_	140	4-hydroxybenzoyl CoA thioesterase {Arthrobacter sp	99.97
d1sc0a_	137	Hypothetical protein HI1161 {Haemophilus influenza	99.97
d2f0xa1	136	Hypothetical protein Them2 {Human (Homo sapiens) [	99.97
d1vh5a_	138	Hypothetical protein YdiI {Escherichia coli [TaxId	99.97
d2fs2a1	131	Phenylacetic acid degradation protein PaaI {Escher	99.97
d1wlua1	116	Phenylacetic acid degradation protein PaaI {Thermu	99.97
d1zkia1	126	Hypothetical protein PA5202 {Pseudomonas aeruginos	99.97
d2hboa1	142	Hypothetical protein CC3309 {Caulobacter crescentu	99.95
d1ixla_	130	Hypothetical protein PH1136 {Archaeon Pyrococcus h	99.94
d1sh8a_	153	Hypothetical protein PA5026 {Pseudomonas aeruginos	99.92
d1yoca1	145	Hypothetical protein PA1835 {Pseudomonas aeruginos	99.91
d1t82a_	143	Putative thioesterase SO4397 {Shewanella oneidensi	99.9
d2f41a1	111	Transcription factor FapR, C-terminal domain {Baci	99.87
d2ov9a1	203	Hypothetical protein RHA1_ro05818 {Rhodococcus sp.	99.87
d1ylia1	142	Putative acyl-coa thioester hydrolase HI0827 {Haem	99.75
d2gvha2	116	Probable acyl-CoA hydrolase AGR_L_2016 {Agrobacter	99.73
d1y7ua1	164	Acyl-coa hydrolase BC2038 {Bacillus cereus [TaxId:	99.72
d2gvha1	135	Probable acyl-CoA hydrolase AGR_L_2016 {Agrobacter	99.7
d1vpma_	155	Acyl-CoA hydrolase BH0798 {Bacillus halodurans [Ta	99.63
d2cwza1	138	Hypothetical protein TTHA0967 {Thermus thermophilu	99.12
d1njka_	133	Hypothetical protein YbaW {Escherichia coli [TaxId	99.03
d1s5ua_	129	Hypothetical protein YbgC {Escherichia coli [TaxId	99.02
d2oafa1	143	Hypothetical protein Jann0674 {Jannaschia sp. ccs1	98.98
d1lo7a_	140	4-hydroxybenzoyl-CoA thioesterase {Pseudomonas sp.	98.97
d2fuja1	118	Hypothetical protein XCC1147 {Xanthomonas campestr	98.97
d1z54a1	132	Probable thioesterase TTHA0908 {Thermus thermophil	98.88
d2hx5a1	144	Hypothetical protein PMT2055 {Prochlorococcus mari	98.87
d2o5ua1	139	Hypothetical thioesterase PA5185 {Pseudomonas aeru	98.87
d2cyea1	132	Probable thioesterase TTHA1846 {Thermus thermophil	98.83
d2alia1	130	Hypothetical protein PA2801 {Pseudomonas aeruginos	98.81
d2nuja1	159	Hypothetical protein Jann_1972 {Jannaschia sp. CCS	98.81
d2essa1	149	Acyl-ACP thioesterase {Bacteroides thetaiotaomicro	98.76
d2oiwa1	131	GK1870 orthologue {Bacillus stearothermophilus [Ta	98.75
d2gf6a1	134	Hypothetical protein SSO2295 {Archaeon Sulfolobus	98.74
d2hlja1	156	Hypothetical protein PP0301 {Pseudomonas putida [T	98.68
d2owna1	147	Putative oleoyl-ACP thioesterase LP0708 {Lactobaci	98.6
d2owna2	109	Putative oleoyl-ACP thioesterase LP0708 {Lactobaci	98.43
d2q78a1	130	Uncharacterized protein TM0581 {Thermotoga maritim	98.43
d1tbua1	104	Peroxisomal long-chain acyl-CoA thioesterase 1, TE	98.38
d1iq6a_	132	(R)-specific enoyl-CoA hydratase {Aeromonas caviae	98.08
d1q6wa_	151	Monoamine oxidase regulatory protein {Archaeon Arc	97.89
d1c8ua1	114	Thioesterase II (TesB) {Escherichia coli [TaxId: 5	97.8
d2bi0a1	178	Hypothetical protein Rv0216/MT0226 {Mycobacterium	97.59
d2b3na1	154	Hypothetical protein AF1124 {Archaeon Archaeoglobu	97.59
d1z6ba1	146	(3R)-hydroxymyristoyl ACP dehydrase FabZ {Malaria	97.53
d1u1za_	145	(3R)-hydroxymyristoyl ACP dehydrase FabZ {Pseudomo	97.5
d2essa2	98	Acyl-ACP thioesterase {Bacteroides thetaiotaomicro	97.44
d2bi0a2	152	Hypothetical protein Rv0216/MT0226 {Mycobacterium	96.95
d2c2ia1	149	Hypothetical protein Rv0130 {Mycobacterium tubercu	96.83
d1c8ua2	171	Thioesterase II (TesB) {Escherichia coli [TaxId: 5	96.7
d1pn2a2	124	2-enoyl-coa hydratase domain of multifunctional pe	96.03
d1s9ca2	154	2-enoyl-coa hydratase domain of multifunctional pe	95.83
d1s9ca1	126	2-enoyl-coa hydratase domain of multifunctional pe	95.07
d1pn2a1	148	2-enoyl-coa hydratase domain of multifunctional pe	94.61
d1mkaa_	171	beta-Hydroxydecanol thiol ester dehydrase {Escheri	93.4

>d1vh9a_ d.38.1.5 (A:) Hypothetical protein YbdB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein YbdB
species: Escherichia coli [TaxId: 562]

Probab=99.98  E-value=1.9e-31  Score=205.40  Aligned_cols=130  Identities=24%  Similarity=0.388  Sum_probs=117.1

Q ss_pred             CCchhhccccCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC-CceeEEEE
Q 030085            6 SSNSKQRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG-FKRVAGVQ   84 (183)
Q Consensus         6 ~~~~~~~~~~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~-~~~~vTv~   84 (183)
                      +-...+.+++ .+++|.++||++++++++|+++++|++.++++||.|.+|||++++|+|.++++|+....+ +..++|++
T Consensus         7 ~~tl~~l~~~-~~~~~~~~LGi~~~~~~~g~~~~~~~v~~~~~n~~g~~HGG~iatl~D~~~~~a~~~~~~~~~~~vT~~   85 (138)
T d1vh9a_           7 HLTLDELNAT-SDNTMVAHLGIVYTRLGDDVLEAEMPVDTRTHQPFGLLHGGASAALAETLGSMAGFMMTRDGQCVVGTE   85 (138)
T ss_dssp             CCCHHHHHHT-STTSHHHHTTCEEEEECSSCEEEEEECSTTTBCTTSSBCHHHHHHHHHHHHHHHHHTTCCTTCCEEEEE
T ss_pred             CCCHHHHHhh-CcchHHHhcCCEEEEEeCCEEEEEEEcCHHHcCCCCceecchhhhhHHHHHHHHHHhhccccccccccc
Confidence            3345556665 457899999999999999999999999999999999999999999999999999877654 46789999


Q ss_pred             EeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085           85 LTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus        85 l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      ++++|+||++.| .++++|+++|.||++++++++++|                         ++|++||++++|++++
T Consensus        86 l~v~flrp~~~g-~l~a~a~v~~~Gr~~~~~e~~i~d-------------------------~~g~lvA~a~~T~~il  137 (138)
T d1vh9a_          86 LNATHHRPVSEG-KVRGVCQPLHLGRQNQSWEIVVFD-------------------------EQGRRCCTCRLGTAVL  137 (138)
T ss_dssp             EEEEECSCCCSS-EEEEEEEEEEECSSEEEEEEEEEC-------------------------TTSCEEEEEEEEEEEC
T ss_pred             cceeEEeccCCC-eEEEEEEEEEcCCCEEEEEEEEEc-------------------------CCCCEEEEEeEEEEEE
Confidence            999999999988 699999999999999999999998                         7899999999999953

>d1q4ua_ d.38.1.5 (A:) 4-hydroxybenzoyl CoA thioesterase {Arthrobacter sp., strain su [TaxId: 1667]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: 4-hydroxybenzoyl CoA thioesterase
species: Arthrobacter sp., strain su [TaxId: 1667]

Probab=99.97  E-value=3.4e-31  Score=204.64  Aligned_cols=121  Identities=26%  Similarity=0.367  Sum_probs=111.4

Q ss_pred             CCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC--CceeEEEEEeEEEecCCCC
Q 030085           18 PDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG--FKRVAGVQLTINHLKSAEL   95 (183)
Q Consensus        18 ~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~--~~~~vTv~l~i~flrpa~~   95 (183)
                      .++|..+||++++++++|+++++|+++++|+||.|++|||++++|+|.++++++.....  ...++|++++++|+||++.
T Consensus        17 ~~~~~~~LGi~i~~~~~g~~~~~l~v~~~~~n~~G~vHGG~~~tl~D~a~~~a~~~~~~~~~~~~~t~~~~~~~~~~~~~   96 (140)
T d1q4ua_          17 EQTLDGTVGFVIDEMTPERATASVEVTDTLRQRWGLVHGGAYCALAEMLATEATVAVVHEKGMMAVGQSNHTSFFRPVKE   96 (140)
T ss_dssp             GGSHHHHHTCEEEEEETTEEEEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEECSCCCS
T ss_pred             hhhHHhhcCeEEEEEeCCEEEEEEECCHHHcCCCCeEEeeEEEEEeccccchhhhhhcccceeeeechhhhhhccccccC
Confidence            57899999999999999999999999999999999999999999999999988766543  2567899999999999998


Q ss_pred             CCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCC
Q 030085           96 GDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPV  165 (183)
Q Consensus        96 Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~  165 (183)
                      | .|+++|+++|.||++++++++|+|                         ++|++||++++|+++ +|+
T Consensus        97 g-~l~a~a~v~~~Gr~~~~~~~~i~d-------------------------~~g~lvA~at~T~~i-~pk  139 (140)
T d1q4ua_          97 G-HVRAEAVRIHAGSTTWFWDVSLRD-------------------------DAGRLCAVSSMSIAV-RPR  139 (140)
T ss_dssp             S-EEEEEEEEEEECSSEEEEEEEEEC-------------------------TTCCEEEEEEEEEEE-EEC
T ss_pred             c-eEEEEEEEeEEcceEEEEEEEEEC-------------------------CCCCEEEEEEEEEEE-eCC
Confidence            8 799999999999999999999998                         679999999999994 554

>d1sc0a_ d.38.1.5 (A:) Hypothetical protein HI1161 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein HI1161
species: Haemophilus influenzae [TaxId: 727]

Probab=99.97  E-value=8.2e-31  Score=201.57  Aligned_cols=121  Identities=34%  Similarity=0.583  Sum_probs=112.7

Q ss_pred             CCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCC-ceeEEEEEeEEEecCCCC
Q 030085           17 VPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGF-KRVAGVQLTINHLKSAEL   95 (183)
Q Consensus        17 ~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~-~~~vTv~l~i~flrpa~~   95 (183)
                      ..++|.++||++++++++|+++++||+.++|+||.|.+|||++++|+|.++++|+....+. ..++|++++++|+||++.
T Consensus        15 ~~~~~~~~lG~~~~~~~~g~~~~~~~v~~~~~n~~g~vHGG~l~al~D~~~~~a~~~~~~~~~~~~T~~l~v~flrp~~~   94 (137)
T d1sc0a_          15 CSNSAVSHLGIEISAFGEDWIEATMPVDHRTMQPFGVLHGGVSVALAETIGSLAGSLCLEEGKTVVGLDINANHLRPVRS   94 (137)
T ss_dssp             TCSSHHHHTTCEEEEECSSCEEEEEECSTTTBCTTSSBCHHHHHHHHHHHHHHHHHHTSCTTCEEEEEEEEEEECSCCCS
T ss_pred             ccccHHHhcCCEEEEEECCEEEEEEEcCHHHcCCCCeeeccceeeehHHhHHHHHHHhhcccceeEeeeEEEEEEeecCC
Confidence            4478999999999999999999999999999999999999999999999999988776554 689999999999999998


Q ss_pred             CCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecC
Q 030085           96 GDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLP  164 (183)
Q Consensus        96 Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p  164 (183)
                      | .++++|+++|.||+++++++++++                         ++|++||++++|+++ +|
T Consensus        95 g-~l~a~a~v~~~Gr~~~~~e~~i~~-------------------------~~g~lvA~a~~T~~i-~~  136 (137)
T d1sc0a_          95 G-KVTARATPINLGRNIQVWQIDIRT-------------------------EENKLCCVSRLTLSV-IN  136 (137)
T ss_dssp             S-EEEEEEEEEEECSSEEEEEEEEEC-------------------------TTSCEEEEEEEEEEE-EC
T ss_pred             C-eEEEEEEEEEcCccEEEEEEEEEe-------------------------CCCCEEEEEEEEEEE-Ec
Confidence            8 799999999999999999999998                         779999999999994 44

>d2f0xa1 d.38.1.5 (A:3-138) Hypothetical protein Them2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein Them2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.8e-31  Score=202.19  Aligned_cols=126  Identities=20%  Similarity=0.292  Sum_probs=116.4

Q ss_pred             ccccCCCCchhhhcC-CEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEe
Q 030085           12 RKRIAVPDAPLKAIG-FELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHL   90 (183)
Q Consensus        12 ~~~~~~~~p~~~~Lg-~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~fl   90 (183)
                      .+.+...++|.+.|| +++.++++|+++++|++.++|+||.|.+|||++++|+|.++++++....++..++|++++++||
T Consensus        10 ~~~~~~~~~f~~~lg~i~~~~~~~g~~~~~~~v~~~~~n~~G~lhGG~i~~l~D~~~~~a~~~~~~~~~~vT~~l~i~fl   89 (136)
T d2f0xa1          10 IKAMTKARNFERVLGKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYM   89 (136)
T ss_dssp             HHHHHHCSSGGGGGTTCEEEEEETTEEEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHTSSSCCCCEEEEEEEEEC
T ss_pred             HHHhhccCCHHHHhCCEEEEEEcCCEEEEEEEcCHHHcCCCCccchhHHHHHHHHHHHHHHHhhCCCCcceeeeEEEEEE
Confidence            345566789999998 8999999999999999999999999999999999999999999987765667789999999999


Q ss_pred             cCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           91 KSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        91 rpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      ||++.|+.|+++|+++|.||+++++++++++.                        +++++||++++|+|+
T Consensus        90 ~p~~~G~~v~~~a~v~~~gr~~~~~~~~i~~~------------------------~~~~liA~~~~T~~~  136 (136)
T d2f0xa1          90 SPAKLGEDIVITAHVLKQGKTLAFTSVDLTNK------------------------ATGKLIAQGRHTKHL  136 (136)
T ss_dssp             SCCBTTCEEEEEEEEEEECSSEEEEEEEEEET------------------------TTCCEEEEEEEEEEC
T ss_pred             ecCCCCCEEEEEEEEEEeCCCEEEEEEEEEEC------------------------CCCEEEEEEEEEEeC
Confidence            99999999999999999999999999999982                        568999999999983

>d1vh5a_ d.38.1.5 (A:) Hypothetical protein YdiI {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein YdiI
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=2.1e-30  Score=199.24  Aligned_cols=125  Identities=27%  Similarity=0.491  Sum_probs=114.9

Q ss_pred             hhccccCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCC-ceeEEEEEeEE
Q 030085           10 KQRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGF-KRVAGVQLTIN   88 (183)
Q Consensus        10 ~~~~~~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~-~~~vTv~l~i~   88 (183)
                      ...|.+ ..+||.++||++++++++|++++++|+.++++|+.|.+|||++++|+|.++++|+....+. ..++|++++++
T Consensus        11 e~ln~~-~~~~~~~~Lg~~~~~~~~g~~~~~~~~~~~~~n~~g~~HGG~iatl~D~a~~~a~~~~~~~~~~~~t~~~~i~   89 (138)
T d1vh5a_          11 EALNAM-GEGNMVGFLDIRFEHIGDDTLEATMPVDSRTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGLEINAN   89 (138)
T ss_dssp             HHHHHT-TTTSHHHHTTCEEEEECSSCEEEEEECSTTTBCTTSSBCHHHHHHHHHHHHHHHHHHTSCTTCEEEEEEEEEE
T ss_pred             HHHHhh-cccchHHHhCCEEEEEeCCEEEEEEECCHHHcCCCCcCcceeeeeehhhhhhhhhhhhcccccccccceeEEE
Confidence            445554 5679999999999999999999999999999999999999999999999999998877654 56899999999


Q ss_pred             EecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           89 HLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        89 flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      |+||++.| .++++|+++|.||+++++++++++                         ++|++||++++|+++
T Consensus        90 flr~~~~g-~l~a~a~vi~~Gr~~~~~~~~i~~-------------------------~~g~lvA~a~~T~~v  136 (138)
T d1vh5a_          90 HVRSAREG-RVRGVCKPLHLGSRHQVWQIEIFD-------------------------EKGRLCCSSRLTTAI  136 (138)
T ss_dssp             ECSCCCSS-EEEEEEEEEEECSSEEEEEEEEEC-------------------------TTSCEEEEEEEEEEE
T ss_pred             EEeccCCC-cEEEEEEEEEeCCcEEEEEEEEEc-------------------------CCCCEEEEEEEEEEE
Confidence            99999988 699999999999999999999998                         679999999999995

>d2fs2a1 d.38.1.5 (A:1-131) Phenylacetic acid degradation protein PaaI {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Phenylacetic acid degradation protein PaaI
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=5.4e-31  Score=200.77  Aligned_cols=124  Identities=17%  Similarity=0.169  Sum_probs=114.9

Q ss_pred             hhccccCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEE
Q 030085           10 KQRKRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINH   89 (183)
Q Consensus        10 ~~~~~~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~f   89 (183)
                      +.-..+...+||.+.||++++++++|+++++|++.++|+|+.|.+|||++++|+|.++++++..  .+..++|++++++|
T Consensus         7 ~~~~~m~~~~~~~~~LG~~i~~~~~g~~~~~~~v~~~~~n~~G~vhGG~l~al~D~a~~~a~~~--~~~~~~t~~~~i~f   84 (131)
T d2fs2a1           7 QNAHAMYENDACAKALGIDIISMDEGFAVVTMTVTAQMLNGHQSCHGGQLFSLADTAFAYACNS--QGLAAVASACTIDF   84 (131)
T ss_dssp             HHHHHHHHHHHHHHHHTCEEEEEETTEEEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHT--TTCCCEEEEEEEEE
T ss_pred             HHHHHHHhcCHHHHhcCCEEEEEeCCEEEEEEEcCHHHCCCCCcCcCeehhhHHHHHHHHHHHh--cCCceEEEEeeeeE
Confidence            3345566779999999999999999999999999999999999999999999999999988864  34678999999999


Q ss_pred             ecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085           90 LKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus        90 lrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      ++|++.|+.|+++|++++.||++++++++|++                         ++|++||++++|.|
T Consensus        85 l~p~~~G~~l~~~a~v~~~gr~~~~~~~~v~~-------------------------~~g~lvA~~~Gt~y  130 (131)
T d2fs2a1          85 LRPGFAGDTLTATAQVRHQGKQTGVYDIEIVN-------------------------QQQKTVALFRGKSH  130 (131)
T ss_dssp             CSCCBTTCEEEEEEEEEEECSSEEEEEEEEEC-------------------------TTSCEEEEEEEEEE
T ss_pred             ecccCCCCEEEEEEEEEEcCCCEEEEEEEEEe-------------------------CCCCEEEEEEEEEe
Confidence            99999999999999999999999999999998                         78999999999998

>d1wlua1 d.38.1.5 (A:2-117) Phenylacetic acid degradation protein PaaI {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Phenylacetic acid degradation protein PaaI
species: Thermus thermophilus [TaxId: 274]

Probab=99.97  E-value=1.3e-29  Score=188.37  Aligned_cols=114  Identities=18%  Similarity=0.263  Sum_probs=107.7

Q ss_pred             CCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCC
Q 030085           18 PDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGD   97 (183)
Q Consensus        18 ~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd   97 (183)
                      ++||.+.||++++++++|+++++|+++++|+|+.|.+|||++++|+|.++++|+..   ....+|++++|+|++|++.|+
T Consensus         1 ~~Pf~~~lg~~~~~~~~g~~~~~~~~~~~~~n~~G~~hGG~i~tl~D~~~~~a~~~---~~~~vT~~l~i~fl~p~~~g~   77 (116)
T d1wlua1           1 RDPFMEALGLKVLHLAPGEAVVAGEVRADHLNLHGTAHGGFLYALADSAFALASNT---RGPAVALSCRMDYFRPLGAGA   77 (116)
T ss_dssp             CCHHHHHTTCEEEEEETTEEEEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHT---TSCEEEEEEEEEECSCCCTTC
T ss_pred             CChHHHHhCCEEEEEeCCEEEEEEEeCHHHcCCCCCCcCeeEEEEehhhhhhhhhc---cCceEEEEEEEEEcccCCCCC
Confidence            58999999999999999999999999999999999999999999999999988764   246899999999999999999


Q ss_pred             EEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085           98 LVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus        98 ~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      .|+++|++++.||+++++++++++                         + +++||.+++|+|
T Consensus        78 ~l~~~a~v~~~g~~~~~~~~~i~~-------------------------~-~~lvA~a~~t~~  114 (116)
T d1wlua1          78 RVEARAVEVNLSRRTATYRVEVVS-------------------------E-GKLVALFTGTVF  114 (116)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEEEE-------------------------T-TEEEEEEEEEEE
T ss_pred             EEEEEEEEEEeCCcEEEEEEEEEE-------------------------C-CEEEEEEEEEEE
Confidence            999999999999999999999997                         3 799999999998

>d1zkia1 d.38.1.5 (A:4-129) Hypothetical protein PA5202 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein PA5202
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=2.3e-29  Score=190.02  Aligned_cols=118  Identities=15%  Similarity=0.181  Sum_probs=110.4

Q ss_pred             CCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC-CceeEEEEEeEEEecCCCC
Q 030085           17 VPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG-FKRVAGVQLTINHLKSAEL   95 (183)
Q Consensus        17 ~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~-~~~~vTv~l~i~flrpa~~   95 (183)
                      ..+||.++||++++++++|.+++++++.++++|+.|.+|||++++|+|.+++++++...+ +...+|++++|+||||++.
T Consensus         7 ~~~~f~~~lg~~~~~~~~g~~~~~~~~~~~~~n~~G~vHGG~i~~l~D~a~~~a~~~~~~~~~~~vt~~l~i~flr~~~~   86 (126)
T d1zkia1           7 MISAYSELVGLDPVSLGDGVAEVRLPMAAHLRNRGGVMHGGALFSLMDVTMGLACSSSHGFDRQSVTLECKINYIRAVAD   86 (126)
T ss_dssp             SCCHHHHHHTCEEEEECSSEEEEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHHHCTTSCEEEEEEEEEECSCCCS
T ss_pred             hhhHHHHHhCCEEEEEeCCEEEEEEECCHHHcCCCCCEeeEeeEEeeccccccceeeccccCcceEEEEEEEEEEcCCCC
Confidence            357999999999999999999999999999999999999999999999999999888764 4678999999999999998


Q ss_pred             CCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           96 GDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        96 Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      | .|+++|+++|.||+++++++++++                         + +++||++++||++
T Consensus        87 g-~l~a~a~v~~~gr~~~~~~~~i~~-------------------------~-~~lva~a~~tf~~  125 (126)
T d1zkia1          87 G-EVRCVARVLHAGRRSLVVEAEVRQ-------------------------G-DKLVAKGQGTFAQ  125 (126)
T ss_dssp             S-EEEEEEEEEEECSSEEEEEEEEEE-------------------------T-TEEEEEEEEEEEE
T ss_pred             C-EEEEEEEEEEeCCCEEEEEEEEEE-------------------------C-CEEEEEEEEEEEE
Confidence            9 699999999999999999999998                         4 6999999999984

>d2hboa1 d.38.1.5 (A:12-153) Hypothetical protein CC3309 {Caulobacter crescentus [TaxId: 155892]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein CC3309
species: Caulobacter crescentus [TaxId: 155892]

Probab=99.95  E-value=2.7e-27  Score=183.29  Aligned_cols=129  Identities=17%  Similarity=0.130  Sum_probs=113.4

Q ss_pred             ccccCCCCchhhhcCC-EEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEe
Q 030085           12 RKRIAVPDAPLKAIGF-ELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHL   90 (183)
Q Consensus        12 ~~~~~~~~p~~~~Lg~-~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~fl   90 (183)
                      .+.+....+|.+++|. .+...++|+++++|++.+.|+|+.|.+|||++++|+|.++++++... .+..++|++++++|+
T Consensus         6 ~~~~~~~~gf~~~~G~~~~~~~~~g~~~~~~~v~~~h~n~~G~~HGG~l~~l~D~~~~~a~~~~-~~~~~vTv~l~v~Fl   84 (142)
T d2hboa1           6 FSQLNWSRGFGRQIGPLFEHREGPGQARLAFRVEEHHTNGLGNCHGGMLMSFADMAWGRIISLQ-KSYSWVTVRLMCDFL   84 (142)
T ss_dssp             EEECCCSSSHHHHHCCEEEECSSTTTTCEEEECCGGGBCSSSBBCHHHHHHHHHHHHHHHHHHH-HCEEEEEEEEEEEEC
T ss_pred             cEECCCCCCHHHhcCCEEEEEecCCEEEEEEEEcHHHccCCCeEcCeehHHHHHHHHHHHhhhc-CCCceEEEEEEEEEC
Confidence            4556677899999995 44555689999999999999999999999999999999999988754 346789999999999


Q ss_pred             cCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCCC
Q 030085           91 KSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPD  167 (183)
Q Consensus        91 rpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p~  167 (183)
                      +|++.|+.|+++|+++|.||+++++++++++                          ++++||++++||++..+++.
T Consensus        85 ~p~~~G~~l~~~a~v~~~g~~~~~~~~~i~~--------------------------~~~~va~a~g~~~~~~~~~~  135 (142)
T d2hboa1          85 SGAKLGDWVEGEGELISEEDMLFTVRGRIWA--------------------------GERTLITGTGVFKALSARKP  135 (142)
T ss_dssp             SCCBTTCEEEEEEEEEEEETTEEEEEEEEEE--------------------------TTEEEEEEEEEEEEEEECCC
T ss_pred             cccCCCCEEEEEEEEEEeCCcEEEEEEEEEE--------------------------CCEEEEEEEEEEEEcCCCCC
Confidence            9999999999999999999999999999997                          36999999999996555433

>d1ixla_ d.38.1.5 (A:) Hypothetical protein PH1136 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein PH1136
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.94  E-value=3.2e-26  Score=174.66  Aligned_cols=122  Identities=11%  Similarity=0.055  Sum_probs=109.3

Q ss_pred             cccCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCC-cCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEec
Q 030085           13 KRIAVPDAPLKAIGFELEELTPERIIGCFRVTQNS-CQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLK   91 (183)
Q Consensus        13 ~~~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~-~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flr   91 (183)
                      -.+...+...+.|+.++.++++|+++++|++.+++ +|+.|.+|||++++|+|.++++++.    ...++|++++++|++
T Consensus         4 ~~~r~~~~~~~~l~~~~v~~~~g~a~~~l~~~~~~~~n~~G~vHGG~l~~l~D~a~~~a~~----~~~~vT~~l~i~fl~   79 (130)
T d1ixla_           4 VEQRTHKLTSRILVGKPILIKEGYAEVELETIDEMKVDEKGLVHGGFTFGLADYAAMLAVN----EPTVVLGKAEVRFTK   79 (130)
T ss_dssp             CCCCSCTTCCTTTTCEEEEEETTEEEEEEECCGGGBSSTTCBBCHHHHHHHHHHHHHHHHC----CTTEEEEEEEEEECS
T ss_pred             hHHhhccchhhhcceEEEEEECCEEEEEEEECHHHccCCCCcCcchHHHHHHhhhcccccc----cceEEEEEEEEEEee
Confidence            34556777889999999999999999999999886 6999999999999999999887753    356899999999999


Q ss_pred             CCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCC
Q 030085           92 SAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPV  165 (183)
Q Consensus        92 pa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~  165 (183)
                      |++.|+.|+++|++++.||+++++++++++                         + +++||++++||++ +++
T Consensus        80 pv~~G~~l~~~a~vi~~g~~~~~v~~~i~~-------------------------~-~~~Va~g~~~~~~-~~k  126 (130)
T d1ixla_          80 PVKVGDKLVAKAKIIEDLGKKKIVEVKVYR-------------------------E-EEVVLEGKFYCYV-LEK  126 (130)
T ss_dssp             CCBTTCEEEEEEEEEEEETTEEEEEEEEEE-------------------------T-TEEEEEEEEEEEE-CSS
T ss_pred             ccccCcEEEEEEEEEEeCCcEEEEEEEEEE-------------------------C-CEEEEEEEEEEEE-ECh
Confidence            999999999999999999999999999997                         3 5899999999994 553

>d1sh8a_ d.38.1.5 (A:) Hypothetical protein PA5026 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein PA5026
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=5.3e-25  Score=170.30  Aligned_cols=119  Identities=16%  Similarity=0.060  Sum_probs=106.5

Q ss_pred             cCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCC--ceeEEEEEeEEEecC
Q 030085           15 IAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGF--KRVAGVQLTINHLKS   92 (183)
Q Consensus        15 ~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~--~~~vTv~l~i~flrp   92 (183)
                      +....||.++||++++++++|+++++||++++ .|+.|++|||++++|+|.+++++++...+.  ..++|++++++|+||
T Consensus        13 ~~~~~pf~~~~Gi~v~~~~~g~~~l~~p~~~~-~N~~G~~hGG~~~tl~D~a~~~a~~~~~~~~~~~~~t~~~~i~f~~p   91 (153)
T d1sh8a_          13 TEEKIAFVQRSGLRAEVLEPGYVRLRMPGAGN-ENHIGSMYAGALFTLAELPGGALFLTSFDSARFYPIVKEMTLRFRRP   91 (153)
T ss_dssp             HHHSSHHHHHHTCEEEEEETTEEEEEECSTTC-BCTTSSBCHHHHHHHHHTHHHHHHHHHSCTTTEEEEEEEEEEEECSC
T ss_pred             HHccChHHHHcCcEEEEEeCCEEEEEEEcchh-hCCCCcCHHHHHHHHHHHHHHHHHHHhCCcccceeeeeeeeeeeecc
Confidence            34677999999999999999999999999886 599999999999999999999998877653  457899999999999


Q ss_pred             CCCCCEEEEEEEE------------EEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085           93 AELGDLVRAVATP------------INLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus        93 a~~Gd~l~a~a~v------------i~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      ++ |+ +++++++            .+.||++.+++++++|                         ++|++||++++||+
T Consensus        92 a~-g~-~~~~~~~~~~~~~~~~~~~~~~gr~~~~~~v~i~d-------------------------~~g~lvA~~~~~~~  144 (153)
T d1sh8a_          92 AK-GD-IRVEARLDAERIRQLETEAGERGKAEYSLELQLTD-------------------------EQGEVVAESAALYQ  144 (153)
T ss_dssp             CC-SC-EEEEEECCHHHHHHHHHHHHHHSEEEEEEEEEEEC-------------------------TTCCEEEEEEEEEE
T ss_pred             cc-Cc-EEEEEEecHHHHhhhhhheeecCcEEEEEEEEEEc-------------------------CCCCEEEEEEEEEE
Confidence            98 53 7777764            6899999999999998                         78999999999999


Q ss_pred             E
Q 030085          161 C  161 (183)
Q Consensus       161 ~  161 (183)
                      +
T Consensus       145 i  145 (153)
T d1sh8a_         145 L  145 (153)
T ss_dssp             E
T ss_pred             E
Confidence            5

>d1yoca1 d.38.1.5 (A:1-145) Hypothetical protein PA1835 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein PA1835
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.91  E-value=2.7e-24  Score=167.13  Aligned_cols=119  Identities=19%  Similarity=0.094  Sum_probs=103.9

Q ss_pred             CCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC-CceeEEEEEeEEEecCCC
Q 030085           16 AVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG-FKRVAGVQLTINHLKSAE   94 (183)
Q Consensus        16 ~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~-~~~~vTv~l~i~flrpa~   94 (183)
                      ...-||.++||+++.++++|++++++|+++.++|++|.+|||++++|+|.++|+++....+ +...+|++++|+||||++
T Consensus        21 ~~~~P~~~~lg~~v~~~~~g~~~~~lp~~~~~~N~~g~~HGG~l~tlaD~a~g~a~~~~~~~~~~~~t~~l~i~ylrpa~  100 (145)
T d1yoca1          21 GQFAPYFASIAPQFVELRPGYAEVTFPKRREVLNHIGTVHAIALCNAAELAAGTMTDASIPAGHRWIPRGMTVEYLAKAT  100 (145)
T ss_dssp             HHHSGGGGGGCCEEEEEETTEEEEEECCCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHHSCTTEEEEEEEEEEEECSCCC
T ss_pred             hhhCChhhhcCcEEEEEECCEEEEEEEccHHHhCCCCcEeHHHHHHHHHHHHHHHHhhhCCccceeEEEeeEEEEeeccC
Confidence            3457999999999999999999999999999999999999999999999999999888765 467899999999999997


Q ss_pred             CCCEEEEEEEE--EEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085           95 LGDLVRAVATP--INLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus        95 ~Gd~l~a~a~v--i~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                       |+ ++++|++  ++.|++..++...+.+                         .+|++||+++.|+|+
T Consensus       101 -g~-~~a~a~~~~~~~~~~~~~~v~v~~~-------------------------~~~~~Va~a~~t~~v  142 (145)
T d1yoca1         101 -GD-VRAVADGSQIDWQATGNLVVPVVAY-------------------------VDDKPVFRAEITMYV  142 (145)
T ss_dssp             -SC-EEEEEECTTSCTTCCEEEEEEEEEE-------------------------ETTEEEEEEEEEEEE
T ss_pred             -CC-EEEEEEEeeheecceeEEEEEEEEE-------------------------cCCCEEEEEEEEEEE
Confidence             63 7777776  6678887776655555                         578999999999985

>d1t82a_ d.38.1.5 (A:) Putative thioesterase SO4397 {Shewanella oneidensis [TaxId: 70863]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Putative thioesterase SO4397
species: Shewanella oneidensis [TaxId: 70863]

Probab=99.90  E-value=3.7e-23  Score=158.85  Aligned_cols=120  Identities=8%  Similarity=-0.063  Sum_probs=103.8

Q ss_pred             cCCCCchhhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc----CCceeEEEEEeEEEe
Q 030085           15 IAVPDAPLKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS----GFKRVAGVQLTINHL   90 (183)
Q Consensus        15 ~~~~~p~~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~----~~~~~vTv~l~i~fl   90 (183)
                      +....||.++||+++++++++++++++|++++ .|+.|++|||++++|+|.++++++....    ....++|++++|+|+
T Consensus        12 ~~~~iP~~~~lGi~i~~~~~~~~~~~~pl~~n-~N~~gt~hgG~l~tlad~a~g~~~~~~~~~~~~~~~~v~~~~~i~yl   90 (143)
T d1t82a_          12 WHSTIPVSEFMQIAPLSFTDGELSVSAPLAPN-INLHHTMFAGSIYTIMTLTGWGMVWLQQQLLNVDGDIVLADAHIRYL   90 (143)
T ss_dssp             HHHHCHHHHHTTCEEEEEETTEEEEECCSGGG-BCTTSSBCHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEEEEEC
T ss_pred             HHhhCChHHHcCcEEEEEcCCeEEEEeecccc-cCCCCcEehhhhHHHHHHHHHHHHHHHHhhcCCCcchheeeEEEEEe
Confidence            35678999999999999999999999999776 5999999999999999999988876543    235689999999999


Q ss_pred             cCCCCCCEEEEEEEEE--------EeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085           91 KSAELGDLVRAVATPI--------NLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus        91 rpa~~Gd~l~a~a~vi--------~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      ||+..+  ++++|++.        +.||....+++++++                          +|++||++++||+ .
T Consensus        91 rP~~~~--~~a~a~~~~~~~~~l~~~gr~~~~~~v~v~d--------------------------~g~~vA~~~Gty~-v  141 (143)
T d1t82a_          91 APVTSA--PEVKVRWPDTNLSPLQRGRKAKVKLEVQLFC--------------------------DGKLCAQFDGLYV-S  141 (143)
T ss_dssp             SCCCSC--CEEEEECCSCCCGGGGGTCCEEEEEEEEEEE--------------------------TTEEEEEEEEEEE-E
T ss_pred             cccccC--cEEEEEechhhhHHHhcCCeEEEEEEEEEEE--------------------------CCEEEEEEEEEEE-E
Confidence            999844  77888764        669999999999997                          4899999999988 4


Q ss_pred             cC
Q 030085          163 LP  164 (183)
Q Consensus       163 ~p  164 (183)
                      +|
T Consensus       142 ~p  143 (143)
T d1t82a_         142 VP  143 (143)
T ss_dssp             EC
T ss_pred             eC
Confidence            55

>d2f41a1 d.38.1.5 (A:73-183) Transcription factor FapR, C-terminal domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Transcription factor FapR, C-terminal domain
species: Bacillus subtilis [TaxId: 1423]

Probab=99.87  E-value=3.4e-22  Score=148.23  Aligned_cols=108  Identities=18%  Similarity=0.124  Sum_probs=92.9

Q ss_pred             hcCCEEEEEeCC-EEEEEEEcCCCCcC-CCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEE
Q 030085           24 AIGFELEELTPE-RIIGCFRVTQNSCQ-PFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRA  101 (183)
Q Consensus        24 ~Lg~~~~~~~~g-~v~~~m~v~~~~~N-p~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a  101 (183)
                      +.| ++.++++| +++..++++++|+| +.|++|||++++|+|++++.++    ++..++|++++++|++|+++||.|++
T Consensus         2 liG-eii~~~~g~~a~~~~~v~~~~~~~~~g~~hGg~i~slad~~~~~~~----~~~~~vt~~~~i~f~~pv~~Gd~l~a   76 (111)
T d2f41a1           2 VIG-EIIDLELDDQAISILEIKQEHVFSRNQIARGHHLFAQANSLAVAVI----DDELALTASADIRFTRQVKQGERVVA   76 (111)
T ss_dssp             CSS-EEEEEETTTEEEEEEECCGGGBCSTTCBBCHHHHHHHHHHHHHHTC-------CCCEEEEEEEECSCCBTTCEEEE
T ss_pred             ccE-EEEEEeCCceEEEEEEcCHHHhccccCCccccchHHHHHHHHHhhc----CCCcEEEEEEEEEEEEccccCceEEE
Confidence            456 89999999 57888999999986 6899999999999999876554    34578999999999999999999999


Q ss_pred             EEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          102 VATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       102 ~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      +|++++.||++.++++++++.                        .++++++.|+.++|
T Consensus        77 ~a~v~~~~~~~~~~~v~v~~~------------------------~~~~~V~~G~f~~y  111 (111)
T d2f41a1          77 KAKVTAVEKEKGRTVVEVNSY------------------------VGEEIVFSGRFDMY  111 (111)
T ss_dssp             EEEEEEECSSSSCEEEEEEEE------------------------ETTEEEEEEEEEEC
T ss_pred             EEEEEEECCcEEEEEEEEEEE------------------------ECCEEEEEEEEEEC
Confidence            999999999999999999982                        46789988777765

>d2ov9a1 d.38.1.5 (A:7-209) Hypothetical protein RHA1_ro05818 {Rhodococcus sp. RHA1 [TaxId: 101510]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein RHA1 ro05818
species: Rhodococcus sp. RHA1 [TaxId: 101510]

Probab=99.87  E-value=9.2e-22  Score=160.68  Aligned_cols=109  Identities=17%  Similarity=0.137  Sum_probs=101.1

Q ss_pred             cCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEE
Q 030085           25 IGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVAT  104 (183)
Q Consensus        25 Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~  104 (183)
                      +.++++..++|.++.++.+.+.|+||.|.+|||++++|+|.++|+++..  .+...+|++|+|+|++|++.|+.|+++|+
T Consensus        94 ppl~~~~~~dg~v~~~~~~~~~~~gp~G~vHGG~ia~llD~~~g~a~~~--~~~~~vT~~L~i~y~~p~~~g~~l~~~a~  171 (203)
T d2ov9a1          94 PPVVLEGLSDGSVRGTVTLTIPYQGPPGHVHGGVSALLLDHVLGVANAW--GGKAGMTAQLSTRYHRPTPLFEPLTLTGK  171 (203)
T ss_dssp             CCCCCEECTTSCEEEEEECCGGGBSSTTBBCHHHHHHHHHHHHHHHHHH--TTCCCEEEEEEEEECSCCBSSSEEEEEEE
T ss_pred             CCEEEEEcCCCEEEEEEEECHHHcCCCCeeehhHHHHHHHHHHHhhhhc--cCCceeeeEEEEEEeeccCCCCEEEEEEE
Confidence            4567788889999999999999999999999999999999999998865  34568999999999999999999999999


Q ss_pred             EEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          105 PINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       105 vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      +++.|+|..+++++|++                         ++|+++|+++++|+
T Consensus       172 v~~~~~r~~~~~~~i~~-------------------------~dG~l~A~a~g~fv  202 (203)
T d2ov9a1         172 LMSVDGRKITTAGDIRT-------------------------ADGQVCVSVEGLFV  202 (203)
T ss_dssp             EEEEETTEEEEEEEEEC-------------------------TTCCEEEEEEEEEE
T ss_pred             EEEeCCCEEEEEEEEEe-------------------------CCCCEEEEEEEEEE
Confidence            99999999999999998                         67999999999986

>d1ylia1 d.38.1.1 (A:11-152) Putative acyl-coa thioester hydrolase HI0827 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: 4HBT-like
domain: Putative acyl-coa thioester hydrolase HI0827
species: Haemophilus influenzae [TaxId: 727]

Probab=99.75  E-value=2.9e-17  Score=126.64  Aligned_cols=111  Identities=15%  Similarity=0.204  Sum_probs=94.3

Q ss_pred             eCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEE-eEEEecCCCCCCEEEEEEEEEEeCCc
Q 030085           33 TPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL-TINHLKSAELGDLVRAVATPINLGKT  111 (183)
Q Consensus        33 ~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrpa~~Gd~l~a~a~vi~~Gr~  111 (183)
                      .+|.++++..+.|.|+|++|++|||.+++++|.++++++..+.. ..++|+.+ +|+|++|++.||.|.++|+|++.||+
T Consensus         3 ~~g~~~~~~~v~P~~~N~~G~l~GG~l~~~~D~~a~~~A~~~~~-~~~vt~~vd~i~F~~pv~~Gd~l~~~a~v~~~G~s   81 (142)
T d1ylia1           3 SKGVLLLRTLAMPSDTNANGDIFGGWIMSQMDMGGAILAKEIAH-GRVVTVAVESMNFIKPISVGDVVCCYGQCLKVGRS   81 (142)
T ss_dssp             CCSEEEEEEECCGGGBCTTSCBCHHHHHHHHHHHHHHHHHHHHT-SCEEEEEECCEECCSCCCTTCEEEEEEEEEEECSS
T ss_pred             CCcEEEEEEEcCccccCCCCcEeHHHHHHHHHHHHHHHHHHhcC-CCccEEEEeeEEEEeccccCcEEEEEEEEeecccc
Confidence            35889999999999999999999999999999999999887654 46899999 59999999999999999999999999


Q ss_pred             EEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          112 IQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       112 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      +..+.++++.++.                 .+...++.++++.+..||..
T Consensus        82 Sm~V~v~v~~~~~-----------------~~~~~ge~~~v~~a~ftfV~  114 (142)
T d1ylia1          82 SIKIKVEVWVKKV-----------------ASEPIGERYCVTDAVFTFVA  114 (142)
T ss_dssp             EEEEEEEEEEECC-----------------SSSSTTCEEEEEEEEEEEEE
T ss_pred             eEEEEEEEEEEcc-----------------ccCccCeEEEEEEEEEEEEE
Confidence            9999999997310                 00011345789999999974

>d2gvha2 d.38.1.1 (A:147-262) Probable acyl-CoA hydrolase AGR_L_2016 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: 4HBT-like
domain: Probable acyl-CoA hydrolase AGR L 2016
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.73  E-value=6.2e-17  Score=120.41  Aligned_cols=104  Identities=18%  Similarity=0.237  Sum_probs=89.5

Q ss_pred             EEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEE-eEEEecCCCCCCEEEEEEEEEEeCCcEEEE
Q 030085           37 IIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL-TINHLKSAELGDLVRAVATPINLGKTIQVW  115 (183)
Q Consensus        37 v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~  115 (183)
                      +++...+.|++.|+.|.+|||.++.++|.++++++....+ ..++|+.+ +|+|++|++.||.|.++|+|++.||+...+
T Consensus         2 vt~~~lv~P~~~N~~G~l~GG~l~~~~D~~a~~~a~~~~~-~~~vt~~id~i~F~~Pv~~Gd~l~~~a~V~~~G~sS~~V   80 (116)
T d2gvha2           2 VTMVEIVFPDQANSAGRMFGGEAIAYMTKAAFVAASRYCG-KLVVLASSERIDFARAIEIGEIVEAQAHVERVGRSSMSI   80 (116)
T ss_dssp             EEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHHHHS-SEEEEEEECCEEBSSCCBTTEEEEEEEEEEEECSSEEEE
T ss_pred             eEEEEEEChhhcCCCCcChHHHHHHHHHHHHHHHHHHHcC-CCceEEEEeEEEEEeeecCCCEEEEEEEEEEccceeEEE
Confidence            5667788899999999999999999999999988877654 57899999 599999999999999999999999999999


Q ss_pred             EEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          116 QVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       116 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      +++++.++.                    .+++.++++++..||..
T Consensus        81 ~v~v~~~~~--------------------~~~~~~~~~~~~ftfVa  106 (116)
T d2gvha2          81 QTKLWSENL--------------------LTGERHITATGHFTMVA  106 (116)
T ss_dssp             EEEEEEEET--------------------TTCCEEEEEEEEEEEEE
T ss_pred             EEEEEEEec--------------------CCCcEEEEEEEEEEEEE
Confidence            999986321                    11445799999999974

>d1y7ua1 d.38.1.1 (A:8-171) Acyl-coa hydrolase BC2038 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: 4HBT-like
domain: Acyl-coa hydrolase BC2038
species: Bacillus cereus [TaxId: 1396]

Probab=99.72  E-value=6.7e-17  Score=127.29  Aligned_cols=110  Identities=20%  Similarity=0.157  Sum_probs=95.1

Q ss_pred             EEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEE-eEEEecCCCCCCEEEEEEEEEEeC
Q 030085           31 ELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL-TINHLKSAELGDLVRAVATPINLG  109 (183)
Q Consensus        31 ~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrpa~~Gd~l~a~a~vi~~G  109 (183)
                      .+.+..+.....+.|.++|++|.+|||.++.++|.++++++....+ ..++|+.+ +|+|++|++.||.|.++|+|++.|
T Consensus         4 ~~~es~~~~~~~V~P~~~N~~G~l~GG~ll~~~D~~a~~~a~~~~~-~~~vtasvd~i~F~~Pv~~Gd~l~~~a~V~~~G   82 (164)
T d1y7ua1           4 TANESRVFKTSRVFPTDLNDHNTLFGGKILSEMDMVASISASRHSR-KECVTASMDWVDFLHPVRSSDCVSYESFVIWTG   82 (164)
T ss_dssp             EGGGGCEEEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHHHC-SEEEEEEECCCCCCSCCCTTCEEEEEEEEEEEC
T ss_pred             cccCceeEEEEEEChHHcCCCCceeHHHHHHHHHHHHHHHHHHHcC-CCCceEEEeeEEEeeccCCCceEEEEEEEeecC
Confidence            4567788999999999999999999999999999999998877654 46888888 599999999999999999999999


Q ss_pred             CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          110 KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       110 r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      |++..++++++.++.                    .+++.++++.+..||..
T Consensus        83 ~tS~~V~v~v~~~~~--------------------~~~~~~~~~~a~ftfVa  114 (164)
T d1y7ua1          83 RTSMEVFVKVVSEYL--------------------ISGEKRIAATSFVTFVA  114 (164)
T ss_dssp             SSEEEEEEEEEEECT--------------------TTCCEEEEEEEEEEEEE
T ss_pred             CceEEEEEEEEEEeC--------------------CCCcEEEEEEEEEEEEE
Confidence            999999999997321                    11445789999999975

>d2gvha1 d.38.1.1 (A:9-143) Probable acyl-CoA hydrolase AGR_L_2016 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: 4HBT-like
domain: Probable acyl-CoA hydrolase AGR L 2016
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.70  E-value=9.5e-17  Score=122.65  Aligned_cols=105  Identities=13%  Similarity=0.129  Sum_probs=88.3

Q ss_pred             EEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEE-eEEEecCCCCCCEEEEEEEEEEeCCcEEEE
Q 030085           37 IIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL-TINHLKSAELGDLVRAVATPINLGKTIQVW  115 (183)
Q Consensus        37 v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~  115 (183)
                      ..+.-.+.|+++|++|.+|||.+++++|.++++++....+ ..++|+.+ +|+|++|++.||.|.++|+|++.||+...+
T Consensus         9 ~~~~~~V~P~~~N~~G~l~GG~ll~~~D~~a~~~a~~~~~-~~~vt~~vd~i~F~~Pv~~Gd~l~~~a~v~~~GrsSm~V   87 (135)
T d2gvha1           9 TRLIDIVFPGDTNHHGTLFGGTGLALMDRVAFIAATRFGR-TPFVTASCERIDFRQPARIGHIVEFTARPVKAGRRSLTV   87 (135)
T ss_dssp             EEEEEEECTTCHHHHHHHTTHHHHHHHHHHHHHHHHHHHC-SCEEEEEECCEECCCCCSSCEEEEEEEEEEEECSSEEEE
T ss_pred             cEEEEEEChhhcCcCCcChHHHHHHHHHHHHHHHHhHHhC-CCceEEEEeEEEEEeecCCCcEEEEEEEEEEccceeEEE
Confidence            3344457899999999999999999999999999887644 46899999 699999999999999999999999999999


Q ss_pred             EEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085          116 QVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus       116 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      +++++.++.                    .+++.++++.+..||..+
T Consensus        88 ~v~v~~~~~--------------------~~~e~~~~~~~~ftfVav  114 (135)
T d2gvha1          88 EVEMVAETI--------------------IGRQQHTCTRGIFHMVAI  114 (135)
T ss_dssp             EEEEEEEET--------------------TTCCEEEEEEEEEEEEEC
T ss_pred             EEEEEEEeC--------------------CCCeEEEEEEEEEEEEEE
Confidence            999986321                    114567999999999743

>d1vpma_ d.38.1.1 (A:) Acyl-CoA hydrolase BH0798 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: 4HBT-like
domain: Acyl-CoA hydrolase BH0798
species: Bacillus halodurans [TaxId: 86665]

Probab=99.63  E-value=3e-15  Score=116.56  Aligned_cols=108  Identities=17%  Similarity=0.203  Sum_probs=91.0

Q ss_pred             eCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEE-eEEEecCCCCCCEEEEEEEEEEeCCc
Q 030085           33 TPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQL-TINHLKSAELGDLVRAVATPINLGKT  111 (183)
Q Consensus        33 ~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l-~i~flrpa~~Gd~l~a~a~vi~~Gr~  111 (183)
                      ++.+....--+.|.++|++|.+|||.++.++|.++++++....+ ...+|+.+ +|+|++|+..|+.|.+.|+|++.|++
T Consensus         7 ~~~~~~~~~~v~P~~~N~~G~l~GG~ll~~~D~~a~~~a~~~~~-~~~vt~~vd~i~F~~Pv~~Gd~l~~~a~V~~~G~s   85 (155)
T d1vpma_           7 ERSRTIQTRLVLPPDTNHLGTIFGGKVLAYIDEIAALTAMKHAN-SAVVTASIDSVDFKSSATVGDALELEGFVTHTGRT   85 (155)
T ss_dssp             GGTCEEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHHHHT-SEEEEEEECCCCCCSCCBTTEEEEEEEEEEEECSS
T ss_pred             CcceEEEEEEEChhhcCCCCcChHHHHHHHHHHHHHHHHHHhcC-CCceEEEEeeEEEeecccCCcEEEEEEEEEEeccc
Confidence            44555555568899999999999999999999999999987665 46888888 59999999999999999999999999


Q ss_pred             EEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          112 IQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       112 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      ...++++++..+                    ..+++.++++.+..||..
T Consensus        86 S~~V~v~v~~~~--------------------~~~~~~~~~~~~~ftfVa  115 (155)
T d1vpma_          86 SMEVYVRVHSNN--------------------LLTGERTLTTESFLTMVA  115 (155)
T ss_dssp             EEEEEEEEEEEE--------------------TTTCCEEEEEEEEEEEEE
T ss_pred             eEEEEEEEEEec--------------------CCCCcEEEEeEEEEEEEE
Confidence            999999999631                    112456789999999974

>d2cwza1 d.38.1.7 (A:1-138) Hypothetical protein TTHA0967 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: TTHA0967-like
domain: Hypothetical protein TTHA0967
species: Thermus thermophilus [TaxId: 274]

Probab=99.12  E-value=7.8e-10  Score=84.12  Aligned_cols=104  Identities=16%  Similarity=-0.056  Sum_probs=78.3

Q ss_pred             EEEEEEEcCCCCcCC-C--Cc----ccHHHHHHHHHHHHHHHHHHhc-CCceeEEEEEeEEEecCCCCCCEEEEEEEEEE
Q 030085           36 RIIGCFRVTQNSCQP-F--KV----LHGGVSALIAESLASMGAHMAS-GFKRVAGVQLTINHLKSAELGDLVRAVATPIN  107 (183)
Q Consensus        36 ~v~~~m~v~~~~~Np-~--G~----lHGG~~a~LaD~A~g~a~~~~~-~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~  107 (183)
                      ...+++.+++++.-. .  |.    +--..+..++.+++.-++.... ++...++++++++|++|+..|++|++++++++
T Consensus         9 ~~~~~~~Vt~~~~~~f~~sgd~~pv~at~~~ia~~e~~a~~~v~~~l~~G~~tVg~~~~i~hl~Pv~iG~~V~~~a~v~~   88 (138)
T d2cwza1           9 EAVFETVVTPEMTVRFEELGPVHPVYATYWMVKHMELAGRKIILPFLEEGEEGIGSYVEARHLASALPGMRVRVVARHEK   88 (138)
T ss_dssp             EEEEEEECCGGGEEEETTTEEEEEEECHHHHHHHHHHHHHHHHTTTCCTTEEEEEEEEEEEECSCCCTTCEEEEEEEEEE
T ss_pred             EEEEEEEeCHHHhHHHhhcCCcccccchHHHHHHHHHHHHHHHHhhCCCCCCEEEEEEEEEEecccCCCcEEEEEEEEEE
Confidence            455666666654321 1  21    2235566777776644443333 34678999999999999999999999999999


Q ss_pred             eCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCC
Q 030085          108 LGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPV  165 (183)
Q Consensus       108 ~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~  165 (183)
                      .+++...|+++++|                         ++|++|+.|+++.++ +|+
T Consensus        89 v~~~~~~~~v~~~d-------------------------~~g~lV~~g~~~r~i-v~~  120 (138)
T d2cwza1          89 TEGNRVYARVEAYN-------------------------ELGDLIGVGRTEQVI-LPK  120 (138)
T ss_dssp             EETTEEEEEEEEEE-------------------------TTCCEEEEEEEEEEE-EEH
T ss_pred             eCCCEEEEEEEEEE-------------------------CCCCEEEEEEEEEEE-ecH
Confidence            99999999999999                         789999999999774 454

>d1njka_ d.38.1.1 (A:) Hypothetical protein YbaW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: 4HBT-like
domain: Hypothetical protein YbaW
species: Escherichia coli [TaxId: 562]

Probab=99.03  E-value=6.3e-09  Score=75.84  Aligned_cols=105  Identities=13%  Similarity=0.106  Sum_probs=86.8

Q ss_pred             EEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHH-------HHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeC
Q 030085           37 IIGCFRVTQNSCQPFKVLHGGVSALIAESLASMG-------AHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLG  109 (183)
Q Consensus        37 v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a-------~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~G  109 (183)
                      +...++|+..+++++|.++=.....++|.|---.       ......+...+.++++++|++|+..||.|.++.++.+.|
T Consensus         2 ~~~~~~V~~~d~D~~ghvn~~~Y~~~~e~ar~~~l~~~g~~~~~~~~~~~~vv~~~~i~y~~p~~~gd~l~v~~~i~~~~   81 (133)
T d1njka_           2 MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSDSFQWMTAHNIAFVVVNININYRRPAVLSDLLTITSQLQQLN   81 (133)
T ss_dssp             EEEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEEEEEEEECSCCCTTCEEEEEEEEEEEE
T ss_pred             eeEEEEECHHHCCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhccCceEEEeeeeehhhhccccccceeeEEEEEecC
Confidence            4567899999999999999999999999874111       111123456899999999999999999999999999999


Q ss_pred             CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCC
Q 030085          110 KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPV  165 (183)
Q Consensus       110 r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~  165 (183)
                      ++...++.++++.                        ++|+++|.+..|+.+.-+.
T Consensus        82 ~~s~~~~~~i~~~------------------------~~g~~~a~~~~~~v~vd~~  113 (133)
T d1njka_          82 GKSGILSQVITLE------------------------PEGQVVADALITFVCIDLK  113 (133)
T ss_dssp             TTEEEEEEEEEET------------------------TTTEEEEEEEEEEEEEETT
T ss_pred             CcEEEEEEEEEEC------------------------CCCeEEEEEEEEEEEEECC
Confidence            9999999999872                        5789999999999876554

>d1s5ua_ d.38.1.1 (A:) Hypothetical protein YbgC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: 4HBT-like
domain: Hypothetical protein YbgC
species: Escherichia coli [TaxId: 562]

Probab=99.02  E-value=2.1e-08  Score=72.74  Aligned_cols=115  Identities=12%  Similarity=0.099  Sum_probs=92.0

Q ss_pred             EEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHh--------cCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeC
Q 030085           38 IGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMA--------SGFKRVAGVQLTINHLKSAELGDLVRAVATPINLG  109 (183)
Q Consensus        38 ~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~--------~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~G  109 (183)
                      ...+++....+++.|.+|=+....++|.|..-.....        ..+...+.++++++|++|+..||.|.++.++.+.|
T Consensus         4 ~~~~~Vr~~d~D~~Ghv~~~~y~~~~e~ar~~~~~~~g~~~~~~~~~~~~~~v~~~~~~y~~~~~~~d~l~v~~~i~~~~   83 (129)
T d1s5ua_           4 RWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHFSQQALMAERVAFVVRKMTVEYYAPARLDDMLEIQTEITSMR   83 (129)
T ss_dssp             EEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHTTCCHHHHHHTTCEEEEEEEEEEECSCCCTTCEEEEEEEEEEEC
T ss_pred             EEEEEeCHHHcCCCCeeCHHHHHHHHHHHHHhhhhhcCcchhhhhhcceeEEEEEEeeeeeccccCCceeeEEEEEEEcC
Confidence            4577899999999999999999999999853332211        12346899999999999999999999999999999


Q ss_pred             CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCCCccchhHHHHH
Q 030085          110 KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKHAGDALK  177 (183)
Q Consensus       110 r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p~~~~~~~~~~~  177 (183)
                      ++...+..++++                         .+|+++|.|..++.+.-+...++..+=+.|+
T Consensus        84 ~~s~~~~~~i~~-------------------------~~g~~~a~~~~~~v~vd~~~~r~~~iP~~l~  126 (129)
T d1s5ua_          84 GTSLVFTQRIVN-------------------------AENTLLNEAEVLVVCVDPLKMKPRALPKSIV  126 (129)
T ss_dssp             SSEEEEEEEEEC-------------------------TTCCEEEEEEEEEEEEETTTTEECCCCHHHH
T ss_pred             CeEEEEEEEEEc-------------------------CCCeEEEEEEEEEEEEECCCCeEcCCCHHHH
Confidence            999999999997                         6789999999999875444433433334443

>d2oafa1 d.38.1.1 (A:1-143) Hypothetical protein Jann0674 {Jannaschia sp. ccs1 [TaxId: 290400]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: 4HBT-like
domain: Hypothetical protein Jann0674
species: Jannaschia sp. ccs1 [TaxId: 290400]

Probab=98.98  E-value=7.1e-09  Score=76.74  Aligned_cols=116  Identities=16%  Similarity=0.130  Sum_probs=89.7

Q ss_pred             EEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHH-----------HhcCCceeEEEEEeEEEecCCCCCCEEEEEEEE
Q 030085           37 IIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAH-----------MASGFKRVAGVQLTINHLKSAELGDLVRAVATP  105 (183)
Q Consensus        37 v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~-----------~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~v  105 (183)
                      ...+++++...++++|.+|-+....++|.|.--...           ....+...+.++++++|++|+..||.|.++.++
T Consensus         9 F~~~~~Vr~~d~D~~Ghv~~~~Y~~~~e~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~~gd~l~v~~~v   88 (143)
T d2oafa1           9 FVHDVRVTWGDCDPAKIAYTGHLPRFALEAIDAWWSEYHGPGGWYHLELDTNVGTPFVRLEMDFKSPVTPRHILKCHTWP   88 (143)
T ss_dssp             EEEEECCCGGGBCTTSSBCGGGHHHHHHHHHHHHHHHHTCTTHHHHHHHTTCEECCEEEEEEEECSCCCTTSCEEEEEEE
T ss_pred             EEEEEEeCHHHcCCCCcccHHHHHHHHHHhhhhhhhhhccccchhHHHHhcCCCeEEEEEeeEEeeeeeCCCeeEEEEEE
Confidence            456788889999999999999999999988421111           111234578899999999999999999999999


Q ss_pred             EEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCCCccchhHHHHHh
Q 030085          106 INLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKHAGDALKN  178 (183)
Q Consensus       106 i~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p~~~~~~~~~~~~  178 (183)
                      .+.|++...++.++++                          +|+++|.|+.++.+.-....++...=+.|++
T Consensus        89 ~~~~~~s~~~~~~~~~--------------------------~~~~~a~~~~~~v~~d~~~~k~~~iP~~~~~  135 (143)
T d2oafa1          89 TRLGTKSITFRVDGVQ--------------------------DGVTCFVGAFTCVFTIADQFKSQPAPDHLRA  135 (143)
T ss_dssp             EEECSSEEEEEEEEEE--------------------------TTEEEEEEEEEEEEEEGGGTEEECCCHHHHH
T ss_pred             EecCceEEEEEEEEEe--------------------------cceeEEEEEEEEEEEECCCCcccCCCHHHHH
Confidence            9999999999999985                          4899999999998654433333334444443

>d1lo7a_ d.38.1.1 (A:) 4-hydroxybenzoyl-CoA thioesterase {Pseudomonas sp., CBS-3 [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: 4HBT-like
domain: 4-hydroxybenzoyl-CoA thioesterase
species: Pseudomonas sp., CBS-3 [TaxId: 306]

Probab=98.97  E-value=2.2e-08  Score=73.00  Aligned_cols=124  Identities=8%  Similarity=-0.010  Sum_probs=93.4

Q ss_pred             EEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc-----------CCceeEEEEEeEEEecCCCCCCEEEEEEE
Q 030085           36 RIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS-----------GFKRVAGVQLTINHLKSAELGDLVRAVAT  104 (183)
Q Consensus        36 ~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~-----------~~~~~vTv~l~i~flrpa~~Gd~l~a~a~  104 (183)
                      .++++.++....++++|.+|-+....++|.|-.--.....           .+...+.++++++|++|+..||.|.+..+
T Consensus         3 ~~~~~~~V~~~d~D~~G~v~~~~Y~~~~e~ar~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~~~d~l~v~~~   82 (140)
T d1lo7a_           3 SITMQQRIEFGDCDPAGIVWYPNYHRWLDAASRNYFIKCGLPPWRQTVVERGIVGTPIVSCNASFVCTASYDDVLTIETC   82 (140)
T ss_dssp             EEEEEEECCGGGBCTTSSBCTHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHCEEECCEEEEEEEECSCCCTTCEEEEEEE
T ss_pred             eEEEEEEeCHHHcCCCCcCcHHHHHHHHHHHHHhhhhhcCCchhhhhHhhcCCeEEEEEEEEEeEEcccCCCCEEEEEEE
Confidence            4788899999999999999999999999998543322211           11245789999999999999999999999


Q ss_pred             EEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEec--CCCCccchhHHHHHhhh
Q 030085          105 PINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNL--PVPDHAKHAGDALKNSA  180 (183)
Q Consensus       105 vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~--p~p~~~~~~~~~~~~~~  180 (183)
                      +.+.|++...++.++++..                     ..++++++|.|..+..+..  ++.-++..+=+.++...
T Consensus        83 v~~~g~~s~~~~~~i~~~~---------------------~~~~~~~~~~a~~~~v~v~~d~~~~k~~~iP~~~r~~~  139 (140)
T d1lo7a_          83 IKEWRRKSFVQRHSVSRTT---------------------PGGDVQLVMRADEIRVFAMNDGERLRAIEVPADYIELC  139 (140)
T ss_dssp             EEEECSSEEEEEEEEEEEC---------------------TTSCEEEEEEEEEEEEEEEEETTEEEEECCCHHHHHHH
T ss_pred             EEEcCCEEEEEEEEEEECc---------------------cCCCcEEEEEEEEEEEEEeCCCCcCCcccCCHHHHHhh
Confidence            9999999999999999731                     0146799999999876542  22223334445555443

>d2fuja1 d.38.1.1 (A:5-122) Hypothetical protein XCC1147 {Xanthomonas campestris pv. campestris [TaxId: 340]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: 4HBT-like
domain: Hypothetical protein XCC1147
species: Xanthomonas campestris pv. campestris [TaxId: 340]

Probab=98.97  E-value=4.5e-08  Score=70.70  Aligned_cols=100  Identities=9%  Similarity=-0.031  Sum_probs=81.3

Q ss_pred             EEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC-----CceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEE
Q 030085           41 FRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG-----FKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVW  115 (183)
Q Consensus        41 m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~-----~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~  115 (183)
                      ++++...++++|.+|-+....++|.|..-.......     +...+.++++++|++|++.||.+.++.++.+.|++...+
T Consensus         8 i~Vr~~D~D~~Ghvnn~~Y~~~~e~ar~~~~~~~~~~~~~~~~~~vv~~~~~~y~~~~~~~d~v~v~~~~~~~g~~s~~~   87 (118)
T d2fuja1           8 ISVRWRDMDSMGHVNNAKYISYLEEARVRWMLGVEGVAMTDRIAPVVAATNVNYKRPLVWPNDILVELFVERLGSSSVTI   87 (118)
T ss_dssp             ECCCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHSSSCCCCCSSEEEEEEEEEEECSCCCTTCCEEEEEEEEEECSSEEEE
T ss_pred             EEecHHHcCcCCccchHHHHHHHHHHHHHHhhhccchhhhcCeeeEEEeeeeecCccccCCCceEEEEEEEEeCCeEEEE
Confidence            446667799999999999999999985333322211     235678999999999999999999999999999999999


Q ss_pred             EEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEec
Q 030085          116 QVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNL  163 (183)
Q Consensus       116 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~  163 (183)
                      +.++++.    +                   ++++++|.++.++.+.-
T Consensus        88 ~~~i~~~----~-------------------~~~~~~a~g~~~~V~vD  112 (118)
T d2fuja1          88 GHRILDQ----K-------------------DEGVLYSDGNVVVVWID  112 (118)
T ss_dssp             EEEEEES----S-------------------CTTCEEEEEEEEEEEES
T ss_pred             EEEEEEC----C-------------------CCCEEEEEEEEEEEEEE
Confidence            9999982    1                   45789999999987543

>d1z54a1 d.38.1.1 (A:1-132) Probable thioesterase TTHA0908 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: 4HBT-like
domain: Probable thioesterase TTHA0908
species: Thermus thermophilus [TaxId: 274]

Probab=98.88  E-value=8.9e-08  Score=69.70  Aligned_cols=100  Identities=16%  Similarity=0.211  Sum_probs=84.7

Q ss_pred             EEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHh--------cCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeC
Q 030085           38 IGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMA--------SGFKRVAGVQLTINHLKSAELGDLVRAVATPINLG  109 (183)
Q Consensus        38 ~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~--------~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~G  109 (183)
                      +-+++|....+++.|.++=+....++|.|-.......        ..+...+.++.+++|.+|+..||.|.++.++.+.|
T Consensus         4 v~~i~Vr~~d~D~~ghv~~~~y~~~~~~ar~~~~~~~g~~~~~~~~~~~~~~v~~~~~~y~~~~~~~d~i~v~~~v~~i~   83 (132)
T d1z54a1           4 VTRIKVRYAETDQMGVVHHSVYAVYLEAARVDFLERAGLPYHRVEARGVFFPVVELGLTFRAPARFGEVVEVRTRLAELS   83 (132)
T ss_dssp             EEEEECCGGGBCTTSSBCTTHHHHHHHHHHHHHHHHTTCCHHHHHTTTEECCEEEEEEEECSCCCTTCEEEEEEEEEEEC
T ss_pred             EEEEEECHHHcCCCCccCHHHHHHHHHHHhHHHHHHhCCchhhhhhcCceeEEEEEEeeehhhCCCCcEEEEEEEEEEcC
Confidence            4478999999999999999999999998853332222        12346789999999999999999999999999999


Q ss_pred             CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEec
Q 030085          110 KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNL  163 (183)
Q Consensus       110 r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~  163 (183)
                      ++...++.++++                          +|+++|.++.++.+.-
T Consensus        84 ~~s~~~~~~i~~--------------------------~g~~~a~~~~~~v~~~  111 (132)
T d1z54a1          84 SRALLFRYRVER--------------------------EGVLLAEGFTRHLCQV  111 (132)
T ss_dssp             SSEEEEEEEEEE--------------------------TTEEEEEEEEEEECEE
T ss_pred             CEEEEEEEEEEE--------------------------CCEEEEEEEEEEEEcc
Confidence            999999999997                          3899999999987644

>d2hx5a1 d.38.1.1 (A:1-144) Hypothetical protein PMT2055 {Prochlorococcus marinus [TaxId: 1219]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: 4HBT-like
domain: Hypothetical protein PMT2055
species: Prochlorococcus marinus [TaxId: 1219]

Probab=98.87  E-value=5.7e-08  Score=71.76  Aligned_cols=103  Identities=8%  Similarity=-0.064  Sum_probs=85.6

Q ss_pred             EEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHh----------------cCCceeEEEEEeEEEecCCCCCCEEE
Q 030085           37 IIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMA----------------SGFKRVAGVQLTINHLKSAELGDLVR  100 (183)
Q Consensus        37 v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~----------------~~~~~~vTv~l~i~flrpa~~Gd~l~  100 (183)
                      .+.+..|....+++.|.+|-+....++|.|--......                ..+...++++++++|++|+..||.|.
T Consensus         7 f~~~~~Vr~~d~D~~G~v~~~~Y~~~~e~ar~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~~~d~i~   86 (144)
T d2hx5a1           7 LLLRRVVRFGDTDAAGVMHFHQLFRWCHESWEESLESYGLNPADIFPGSRKSEVTPEVALPIIHCQADFRRPIHTGDALA   86 (144)
T ss_dssp             HEEEEECCGGGBCTTSSBCTTHHHHHHHHHHHHHHHHHTCCHHHHCTTCTTCSSCCSEECCEEEEEEEECSCCCTTCEEE
T ss_pred             EEEEEEECHHHcCCCCcCcHHHHHHHHHHHHHHHHHHhCCCHHHHhhccccccccCceEEEEEEEEEEEeccccCCccee
Confidence            45677899999999999999999999999854332221                01124678999999999999999999


Q ss_pred             EEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCC
Q 030085          101 AVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPV  165 (183)
Q Consensus       101 a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~  165 (183)
                      ++.++.+.|++...++.++++                          +|+++|.+..++.+.-+.
T Consensus        87 v~~~v~~~~~~s~~~~~~i~~--------------------------~~~~~a~~~~~~v~~d~~  125 (144)
T d2hx5a1          87 MELRPERLNPNSFQVHFEFRC--------------------------EEQIAAHALIRHLAINAQ  125 (144)
T ss_dssp             EEEEEEEEETTEEEEEEEEEE--------------------------TTEEEEEEEEEEECEETT
T ss_pred             EEEEEecCCCeEEEEEEEEEE--------------------------CCEEEEEEEEEEEEEECC
Confidence            999999999999999999997                          378999999999875444

>d2o5ua1 d.38.1.1 (A:5-143) Hypothetical thioesterase PA5185 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: 4HBT-like
domain: Hypothetical thioesterase PA5185
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.87  E-value=8.4e-08  Score=69.73  Aligned_cols=116  Identities=5%  Similarity=-0.038  Sum_probs=90.2

Q ss_pred             EEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc------CCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcE
Q 030085           39 GCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS------GFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTI  112 (183)
Q Consensus        39 ~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~------~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~  112 (183)
                      ..++++...+++.|.+|-+.+..+++.|-.-......      .+...+.++++++|.+|+..||.|.+..++.+.|++.
T Consensus        12 ~~i~Vr~~d~D~~ghv~~~~y~~~~e~ar~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~p~~~~d~v~v~~~i~~~~~~s   91 (139)
T d2o5ua1          12 QPISTRWHDNDIYGHVNNVTYYAFFDTAVNTYLIERGGLDIQGGEVIGLVVSSSCDYFAPVAFPQRIEMGLRVARLGNSS   91 (139)
T ss_dssp             EEECCCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHHHCCCTTTCSEEEEEEEEEEEECSCCCTTSCEEEEEEEEEECSSE
T ss_pred             EEeecCHhHcCccCccccHHHHHHHHHHHHHHHhhccccceecCCceeEEEEEEEEEcCCcCCCCeEEEEEEEeecCCCE
Confidence            3567778899999999999999999987432222211      1235688999999999999999999999999999999


Q ss_pred             EEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCCCccchhHHHHHh
Q 030085          113 QVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKHAGDALKN  178 (183)
Q Consensus       113 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p~~~~~~~~~~~~  178 (183)
                      ..+..++++.                        ++|+++|.|..|+.+.-.....+...-++++.
T Consensus        92 ~~~~~~i~~~------------------------~~~~~~a~g~~~~v~~d~~~~k~~~~P~~~r~  133 (139)
T d2o5ua1          92 VQYELALFLE------------------------GQREACAAGRFVHVFVERRSSRPVAIPQELRD  133 (139)
T ss_dssp             EEEEEEEEES------------------------SCCBCSEEEEEEEEEEETTTCCBCCCCHHHHH
T ss_pred             EEEEEEEEEC------------------------CCCcEEEEEEEEEEEEECCCCcCccCCHHHHH
Confidence            9999999872                        57899999999998655443444444444444

>d2cyea1 d.38.1.1 (A:1-132) Probable thioesterase TTHA1846 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: 4HBT-like
domain: Probable thioesterase TTHA1846
species: Thermus thermophilus [TaxId: 274]

Probab=98.83  E-value=1.9e-07  Score=68.32  Aligned_cols=99  Identities=13%  Similarity=0.035  Sum_probs=82.3

Q ss_pred             EEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC----CceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcE
Q 030085           37 IIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG----FKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTI  112 (183)
Q Consensus        37 v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~----~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~  112 (183)
                      ...+++++...++++|.+|-+....++|.|..-.......    +...+.++.+++|++|+..||.|.+..++.+.|++.
T Consensus         6 f~~~i~vr~~D~D~~ghvn~~~y~~~~e~ar~~~~~~~g~~~~~~~~~vv~~~~~~y~~~~~~gd~i~i~~~i~~~g~~s   85 (132)
T d2cyea1           6 VRVRVDVRFRDLDPLGHVNNAVFLSYMELARIRYFQRISPDWLEEGHFVVARMEVDYLRPILLGDEVFVGVRTVGLGRSS   85 (132)
T ss_dssp             EEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHTTC--CGGGGGGEEEEEEEEEECSCCBTTCEEEEEEEEEEECSSE
T ss_pred             EEEEEEeCHHHCCCCCeEchHHHHHHHHHHHHHHHHhhCcccccCccEEEEEEEEEEccccccccceEEEEEEEECCCEE
Confidence            5678888888999999999999999999985333222111    234678899999999999999999999999999999


Q ss_pred             EEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          113 QVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       113 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                      ..++.+++.                          +|+++|.++.+++.
T Consensus        86 ~~~~~~i~~--------------------------~~~~~a~~~~~~v~  108 (132)
T d2cyea1          86 LRMEHLVTA--------------------------NGESAAKGLGVLVW  108 (132)
T ss_dssp             EEEEEEEEE--------------------------TTEEEEEEEEEEEE
T ss_pred             EEEEEEEEE--------------------------CCEEEEEEEEEEEE
Confidence            999999985                          47899999988764

>d2alia1 d.38.1.1 (A:5-134) Hypothetical protein PA2801 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: 4HBT-like
domain: Hypothetical protein PA2801
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.81  E-value=1.3e-07  Score=69.05  Aligned_cols=117  Identities=11%  Similarity=0.018  Sum_probs=88.0

Q ss_pred             EEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc-C----CceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcE
Q 030085           38 IGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS-G----FKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTI  112 (183)
Q Consensus        38 ~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~-~----~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~  112 (183)
                      +.+++++...++++|.++-+....++|.+-.--..... +    +...+.++.+++|++|+..||.+.+..++.+.|++.
T Consensus         5 ~~~i~vr~~D~D~~Ghv~n~~y~~~~e~ar~~~~~~~g~~~~~~~~~~vv~~~~~~y~~~~~~~d~~~v~~~v~~ig~~s   84 (130)
T d2alia1           5 TAHIPVRWGDMDSYGHVNNTLYFQYLEEARVAWFETLGIDLEGAAEGPVVLQSLHTYLKPVVHPATVVVELYAGRLGTSS   84 (130)
T ss_dssp             EEEEECCGGGBCTTSSBCTTHHHHHHHHHHHHHHHHTTCCCSSCSEEEEEEEEEEEECSCCCSSCEEEEEEEEEEECSSE
T ss_pred             EEEeecCHHHcCccCccchHHHHHHHHHHHHHHHHHHhhhhhhhccccchhhhhhhhcccccCCCceEEEEEEEecCCcE
Confidence            34678888889999999999999999998543322221 1    235678899999999999999999999999999999


Q ss_pred             EEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCCCccchhHHHHH
Q 030085          113 QVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKHAGDALK  177 (183)
Q Consensus       113 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p~~~~~~~~~~~  177 (183)
                      ..++.++++.+                       +++.++|.++.+..+.-+...++...=+.+|
T Consensus        85 ~~~~~~i~~~~-----------------------~~~~~~a~~~~~~v~~d~~~~k~~~iP~~~r  126 (130)
T d2alia1          85 LVLEHRLHTLE-----------------------DPQGTYGEGHCKLVWVRHAENRSTPVPDSIR  126 (130)
T ss_dssp             EEEEEEEEESS-----------------------CTTSCCEEEEEEEEEEEGGGTEECCCCHHHH
T ss_pred             EEEEEEEEECC-----------------------CCCEEEEEEEEEEEEEECCCCcCcCCCHHHH
Confidence            99999999821                       3467889999888754433333333333443

>d2nuja1 d.38.1.1 (A:3-161) Hypothetical protein Jann_1972 {Jannaschia sp. CCS1 [TaxId: 290400]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: 4HBT-like
domain: Hypothetical protein Jann 1972
species: Jannaschia sp. CCS1 [TaxId: 290400]

Probab=98.81  E-value=4e-07  Score=68.21  Aligned_cols=120  Identities=11%  Similarity=-0.036  Sum_probs=92.5

Q ss_pred             EEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHh-c-----CCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeC
Q 030085           36 RIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMA-S-----GFKRVAGVQLTINHLKSAELGDLVRAVATPINLG  109 (183)
Q Consensus        36 ~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~-~-----~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~G  109 (183)
                      ..++..+|+...++++|.+|=.....++|.|-.--.... .     .+...+.++++++|++|+..||.|.++.++.+.|
T Consensus        23 ~~~~~~~Vr~~d~D~~ghv~n~~Y~~~~e~ar~~~l~~~g~~~~~~~~~~~vv~~~~i~y~~p~~~gd~v~v~~~v~~~~  102 (159)
T d2nuja1          23 TFGLADRVRFGELDAIGHVNHTAYLRWYESFRLPFLKARHVTDYGPTSPRLVLKQVHCTYLAEMGMGEDYVITGRVSNFR  102 (159)
T ss_dssp             CEEEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHTTSCCCSSSSCEEEEEEEEEEECSCCCTTCEEEEEEEEEEEC
T ss_pred             ceEEEeEEchHHcCccCceehHHHHHHHHHHHHHHHHHhhhhcccchhcceeeeEEEEEEecccccCcEEEEEEEEEecC
Confidence            367777899999999999999999999998743222221 1     1235688999999999999999999999999999


Q ss_pred             CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCCCccchhHHHHHh
Q 030085          110 KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKHAGDALKN  178 (183)
Q Consensus       110 r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p~~~~~~~~~~~~  178 (183)
                      ++...++.+++..    +                   ++++++|.++.++.+.-+...++...=+.||+
T Consensus       103 ~~s~~~~~~i~~~----~-------------------~~~~~~a~~~~~~V~vd~~~~k~~~iP~~lr~  148 (159)
T d2nuja1         103 TTSFTMEFACWRL----G-------------------DAVECTSEGSAVVVLLNRDGSGRYPIPEAGRA  148 (159)
T ss_dssp             SSEEEEEEEEEEC----S-------------------SSCEEEEEEEEEEEEECTTSSSBCCCCHHHHH
T ss_pred             CcEEEEEEEEEEe----c-------------------cCceEEEEEEEEEEEEECCCCcCccCCHHHHH
Confidence            9999999999862    1                   45799999999998655443333334444443

>d2essa1 d.38.1.8 (A:1-149) Acyl-ACP thioesterase {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: Acyl-ACP thioesterase-like
domain: Acyl-ACP thioesterase
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=98.76  E-value=4.6e-07  Score=67.68  Aligned_cols=103  Identities=10%  Similarity=-0.171  Sum_probs=86.7

Q ss_pred             EEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc--------CCceeEEEEEeEEEecCCCCCCEEEEEEEEEEe
Q 030085           37 IIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS--------GFKRVAGVQLTINHLKSAELGDLVRAVATPINL  108 (183)
Q Consensus        37 v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~--------~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~  108 (183)
                      -+.++.+.+.++++.|.+-=+.++.+++.+...-+....        .+...+.++++|+|.+|+..||+|.++.++...
T Consensus         8 ~t~~~~v~~~~~D~~G~~~~~~y~~~~~d~~~~~~~~~G~~~~~l~~~g~~~vv~~~~i~y~~~~~~gd~v~V~t~~~~~   87 (149)
T d2essa1           8 GTYQFVAEPFHVDFNGRLTMGVLGNHLLNCAGFHASDRGFGIATLNEDNYTWVLSRLAIELDEMPYQYEKFSVQTWVENV   87 (149)
T ss_dssp             EEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHHTTCSHHHHHHTTEEEEEEEEEEEESCCCBTTCEEEEEEEEEEE
T ss_pred             EEEEEEeCHHHCCCCCCcCHHHHHHHHHHHHHHHHHHcCcchhhHhccCceEEEEEEEEEEeeccccCceeeEEEEEeee
Confidence            367889999999999999888888888887554433321        123578999999999999999999999999999


Q ss_pred             CCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecC
Q 030085          109 GKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLP  164 (183)
Q Consensus       109 Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p  164 (183)
                      ++....++.+|++                         ++|+++|.++.++.+.-.
T Consensus        88 ~~~~~~~~~~i~~-------------------------~~g~~ia~a~~~~v~id~  118 (149)
T d2essa1          88 YRLFTDRNFAVID-------------------------KDGKKIGYARSVWAMINL  118 (149)
T ss_dssp             CSSEEEEEEEEEC-------------------------TTSCEEEEEEEEEEEEET
T ss_pred             ccceEEEEEEEEe-------------------------cCCcEEEEEEEEEEEEEC
Confidence            9999999999998                         679999999999986543

>d2oiwa1 d.38.1.1 (A:1-131) GK1870 orthologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: 4HBT-like
domain: GK1870 orthologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.75  E-value=2.7e-07  Score=66.58  Aligned_cols=102  Identities=6%  Similarity=-0.030  Sum_probs=83.6

Q ss_pred             EEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC-----CceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcE
Q 030085           38 IGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG-----FKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTI  112 (183)
Q Consensus        38 ~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~-----~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~  112 (183)
                      +.+++++...++++|.+|=+....++|.+-.--......     +...+.++++++|++|+..||.|.++.++.+.|++.
T Consensus         3 ~~~~~vr~~D~D~~ghv~~~~Y~~~~e~ar~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~~gd~i~i~~~~~~~~~~s   82 (131)
T d2oiwa1           3 TTVITPRVSETDGVGHINNTTVPVWFEAGRHEIFKLFTPDLSFKRWRMVIIRMEVDYVNQMYYGQDVTVYTGIERIGNTS   82 (131)
T ss_dssp             EEEECCCGGGBCTTSSBCGGGHHHHHHHHTHHHHHHHSTTCCGGGCCEEEEEEEEEECSCCCTTSCEEEEEEEEEECSSE
T ss_pred             EEEEEechhHcCCCCcccHHHHHHHHHHHhhhhhhccccchhhcCCceEEEEEEEEEEecccCCCcceeEEEEEecCCeE
Confidence            346777888899999999999999999874322222111     235789999999999999999999999999999999


Q ss_pred             EEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCC
Q 030085          113 QVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPV  165 (183)
Q Consensus       113 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~  165 (183)
                      ..++.++++                          +|+++|.++.++.+.-..
T Consensus        83 ~~~~~~i~~--------------------------~g~~~a~~~~~~v~~d~~  109 (131)
T d2oiwa1          83 LTIYEEIHQ--------------------------NGVVCAKGRSVYVNFNFD  109 (131)
T ss_dssp             EEEEEEEEE--------------------------TTEEEEEEEEEEEEEETT
T ss_pred             EEEEEEEEc--------------------------CCEEEEEEEEEEEEEECC
Confidence            999999985                          489999999999875433

>d2gf6a1 d.38.1.1 (A:1-134) Hypothetical protein SSO2295 {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: 4HBT-like
domain: Hypothetical protein SSO2295
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=98.74  E-value=8.1e-07  Score=63.34  Aligned_cols=114  Identities=9%  Similarity=-0.038  Sum_probs=90.5

Q ss_pred             EEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHh--c------CCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeC
Q 030085           38 IGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMA--S------GFKRVAGVQLTINHLKSAELGDLVRAVATPINLG  109 (183)
Q Consensus        38 ~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~--~------~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~G  109 (183)
                      +.+..|....++++|.+|=+....+++.|-.--....  .      .+...+.++.++.|.+|++.|+.+.+..++.+.|
T Consensus         7 ~~~~~V~~~d~D~~ghv~~~~y~~~~e~ar~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~~~d~v~v~~~~~~~~   86 (134)
T d2gf6a1           7 VFEDVVRIYDTDAQGIAHYAAYYRFFTNTIEKFIKEKVGIPYPIVNENLWFVIAESHAIYHRPVKLGDKLTVLLNPKILS   86 (134)
T ss_dssp             EEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHHHCSCSSEEETTEEEEEEEEEEEECSCCCTTCEEEEEEEEEECS
T ss_pred             EEEEEeCHHHcCCCCcccHHHHHHHHHHHHHHHHHHhhcchhhHhhcCcceEEEEEeeEeeccccccccceeeeEEeeeC
Confidence            4678888999999999999999999998864222111  1      1235688999999999999999999999999999


Q ss_pred             CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCCCCccchhHHHHH
Q 030085          110 KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPVPDHAKHAGDALK  177 (183)
Q Consensus       110 r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~p~~~~~~~~~~~  177 (183)
                      ++...++.++++                          +|+++|.++.++.+.-+...++...=+.|+
T Consensus        87 ~~s~~~~~~i~~--------------------------~g~~~a~~~~~~v~~d~~~~~~~~~P~~l~  128 (134)
T d2gf6a1          87 NKTIKFEFKVLK--------------------------DGELTTEGYVIQIAINPKIWKSTEMPKEIM  128 (134)
T ss_dssp             SSEEEEEEEEEE--------------------------TTEEEEEEEEEEEEEETTTTEECCCCHHHH
T ss_pred             CEEEEEEEEEec--------------------------CCEEEEEEEEEEEEEECCCCcCcCCCHHHH
Confidence            999999999996                          489999999999976555444444444444

>d2hlja1 d.38.1.1 (A:1-156) Hypothetical protein PP0301 {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: 4HBT-like
domain: Hypothetical protein PP0301
species: Pseudomonas putida [TaxId: 303]

Probab=98.68  E-value=6.2e-07  Score=67.20  Aligned_cols=103  Identities=15%  Similarity=0.023  Sum_probs=85.9

Q ss_pred             EEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHh-c-------CCceeEEEEEeEEEecCCCCCCEEEEEEEEEE
Q 030085           36 RIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMA-S-------GFKRVAGVQLTINHLKSAELGDLVRAVATPIN  107 (183)
Q Consensus        36 ~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~-~-------~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~  107 (183)
                      ..+.+..|.++++..+|.++=.....+.|.+-.-..... .       .+...+.++.+++|++|++.||.+.++.++..
T Consensus         4 ~~t~~~~V~~~~~D~~gHmNna~Yl~~fe~ar~~~~~~~G~~~~~~~~~~~~~vv~~~~i~y~~~l~~gd~i~V~~~i~~   83 (156)
T d2hlja1           4 LITYRTTVQEDWVDYNGHLRDAFYLLIFSYATDALMDRIGLDADSRGQSGNSLFTLEAHINYLHEVKLGTEVWVQTQILG   83 (156)
T ss_dssp             CEEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHHHTTTTTSTTTTTTTEEEEEEEEEECSCCBTTCEEEEEEEEEE
T ss_pred             cEEEEEEECHHHccccCCchHHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchhhhhheeeeccccccccceEEEEeecc
Confidence            356788899999999999999999999998854222211 1       12356889999999999999999999999999


Q ss_pred             eCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085          108 LGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus       108 ~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      .|++...+.-++++.                        ++|+++|++..++.+.
T Consensus        84 ~~~~~~~~~~~i~~~------------------------~~~~l~a~~~~~~v~v  114 (156)
T d2hlja1          84 FDRKRLHVYHSLHRA------------------------GFDEVLAASEQMLLHV  114 (156)
T ss_dssp             ECSSEEEEEEEEEET------------------------TEEEEEEEEEEEEEEB
T ss_pred             cCCceEEEEeeeccc------------------------chhhheeeeeEEEEEE
Confidence            999999999999972                        6789999999999863

>d2owna1 d.38.1.8 (A:3-149) Putative oleoyl-ACP thioesterase LP0708 {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: Acyl-ACP thioesterase-like
domain: Putative oleoyl-ACP thioesterase LP0708
species: Lactobacillus plantarum [TaxId: 1590]

Probab=98.60  E-value=1.4e-06  Score=63.88  Aligned_cols=102  Identities=9%  Similarity=-0.059  Sum_probs=87.0

Q ss_pred             EEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhc--------CCceeEEEEEeEEEecCCCCCCEEEEEEEEEEe
Q 030085           37 IIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMAS--------GFKRVAGVQLTINHLKSAELGDLVRAVATPINL  108 (183)
Q Consensus        37 v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~--------~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~  108 (183)
                      -+.+++|+...+++.|.++=+.++.+++.+...-.....        .+...+.+++.|+|.+|+..||.|.++.++...
T Consensus         9 f~~~~~Vr~~d~D~~g~v~~~~y~~~~~~a~~~~~~~~g~~~~~~~~~~~~~vv~~~~i~y~~~~~~~d~l~V~t~~~~~   88 (147)
T d2owna1           9 YSEQHRITYYECDRTGRATLTTLIDIAVLASEDQSDALGLTTEMVQSHGVGWVVTQYAIDITRMPRQDEVVTIAVRGSAY   88 (147)
T ss_dssp             EEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHHTTCCHHHHHTTTEEEEEEEEEEEESSCCBTTCEEEEEEEEEEE
T ss_pred             EEEEEEECHHHcCCCCcCCHHHHHHHHHHHHHHHHHHhcccchhhhcccceeEEEEEEeeEecccccCCEEEEEEEEeec
Confidence            466889999999999999999999999988654443321        123568999999999999999999999999999


Q ss_pred             CCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEec
Q 030085          109 GKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNL  163 (183)
Q Consensus       109 Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~  163 (183)
                      |++...++.++++                         ++|+++|.++.++.+.-
T Consensus        89 ~~~~~~~~~~i~~-------------------------~~g~~~a~~~~~~v~id  118 (147)
T d2owna1          89 NPYFAYREFWIRD-------------------------ADGQQLAYITSIWVMMS  118 (147)
T ss_dssp             CSSCEEEEEEEEC-------------------------TTCCEEEEEEEEEEEEE
T ss_pred             CCcEEEEEEEEEe-------------------------CCCCEEEEEEEEEEEEE
Confidence            9999999999998                         67999999999998643

>d2owna2 d.38.1.8 (A:150-258) Putative oleoyl-ACP thioesterase LP0708 {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: Acyl-ACP thioesterase-like
domain: Putative oleoyl-ACP thioesterase LP0708
species: Lactobacillus plantarum [TaxId: 1590]

Probab=98.43  E-value=1.9e-06  Score=61.06  Aligned_cols=97  Identities=10%  Similarity=-0.063  Sum_probs=76.6

Q ss_pred             eCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcE
Q 030085           33 TPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTI  112 (183)
Q Consensus        33 ~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~  112 (183)
                      ++-.++..++++...+.++|.++=+....+++.++.....     ...+-.+++|+|++|+..||.|.+.+++.+.|++.
T Consensus         8 ~d~~~~~~~~Vr~~D~D~~gHVnN~~Y~~~~~e~~~~~~~-----~~~~v~~~~i~Y~~~~~~gd~v~v~t~v~~~~~~s   82 (109)
T d2owna2           8 TDTTITKPYHVRFFDIDPNRHVNNAHYFDWLVDTLPATFL-----LQHDLVHVDVRYENEVKYGQTVTAHANILPSEVAD   82 (109)
T ss_dssp             CTTCEEEEEECCGGGBCTTSSBCGGGHHHHHHHHSCHHHH-----HTEEEEEEEEEECSCCCTTCEEEEEEEEECCSSTT
T ss_pred             cCccEEEEEEecHHHcCCCCcccCchhHHHHHHHhHHhhh-----hhhhHHHHhhhhhCccCCCCeEEEEEEEEEcCCce
Confidence            3456788899999999999999999999988665433222     12456789999999999999999999999887664


Q ss_pred             -EEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          113 -QVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       113 -~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                       .+.+-.+.                          .+|+++|.++.++.
T Consensus        83 ~~~~~~~i~--------------------------~~g~~~a~A~i~W~  105 (109)
T d2owna2          83 QVTTSHLIE--------------------------VDDEKCCEVTIQWR  105 (109)
T ss_dssp             EEEEEEEEE--------------------------ETTEEEEEEEEEEE
T ss_pred             EEEEEEEEe--------------------------CCCEEEEEEEEEeE
Confidence             44444454                          46899999999986

>d2q78a1 d.38.1.7 (A:1-130) Uncharacterized protein TM0581 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: TTHA0967-like
domain: Uncharacterized protein TM0581
species: Thermotoga maritima [TaxId: 2336]

Probab=98.43  E-value=9.7e-07  Score=66.61  Aligned_cols=103  Identities=8%  Similarity=-0.013  Sum_probs=80.5

Q ss_pred             EEEEEEEcCCCCc---C----CCCcccHHHHHHHHHHHHHHHHHHhcC-CceeEEEEEeEEEecCCCCCCEEEEEEEEEE
Q 030085           36 RIIGCFRVTQNSC---Q----PFKVLHGGVSALIAESLASMGAHMASG-FKRVAGVQLTINHLKSAELGDLVRAVATPIN  107 (183)
Q Consensus        36 ~v~~~m~v~~~~~---N----p~G~lHGG~~a~LaD~A~g~a~~~~~~-~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~  107 (183)
                      +.++.+++++.+.   +    .+-++-=..+.++++.|+.-++....+ +...|++.++|.|+.|++.|+.|+++|+++.
T Consensus        11 ~~t~ev~~~~~~~~~ed~~~~dl~VlaTp~lia~mE~a~~~~l~~~L~~g~ttVG~~v~I~Hla~t~vG~~V~v~a~v~~   90 (130)
T d2q78a1          11 RLTEDVALDETMVWNEDIEMLDLHLVATSALIGVVHRVSYELLSRYLPNDYTAVVVETLARHVKAVPTGTRVAVGVRVVG   90 (130)
T ss_dssp             EEEEEEEECGGGBCCSCGGGGGGCBBCHHHHHHHHHHHHHHHHHTTSCTTEEEEEEEEEEEECSCCBSSEEEEEEEEEEE
T ss_pred             EEEEEEecCccccccCCCccccceEEchHHHHHHHHHHHHHHHHhhCCCCceEEEEEEEEEEcCCcCCCCEEEEEEEEEE
Confidence            3455666666553   1    223666788999999998777666554 4678999999999999999999999999998


Q ss_pred             eCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEecCC
Q 030085          108 LGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCNLPV  165 (183)
Q Consensus       108 ~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~~p~  165 (183)
                      ...+-..+++++++                         + +++||.|+++-++ +++
T Consensus        91 vdgrrl~F~v~a~d-------------------------~-~~~Ia~G~h~R~i-V~r  121 (130)
T d2q78a1          91 VVGNRVKFRGIVMS-------------------------G-DEKILEAEFVRAI-VPR  121 (130)
T ss_dssp             EETTEEEEEEEEEE-------------------------T-TEEEEEEEEEEEE-EEH
T ss_pred             EeCCEEEEEEEEEE-------------------------C-CceEEEEEEEEEE-EEH
Confidence            87777778999997                         3 5789999999884 554

>d1tbua1 d.38.1.3 (A:13-116) Peroxisomal long-chain acyl-CoA thioesterase 1, TES1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: Acyl-CoA thioesterase
domain: Peroxisomal long-chain acyl-CoA thioesterase 1, TES1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.38  E-value=2.5e-06  Score=61.90  Aligned_cols=101  Identities=14%  Similarity=0.123  Sum_probs=71.5

Q ss_pred             CEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEE
Q 030085           27 FELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPI  106 (183)
Q Consensus        27 ~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi  106 (183)
                      ++++.+++++-....+.... .+ ...++||.+++.+=.|+    ....+. ...--+|+..|++|+..+.++..+.+.+
T Consensus         3 l~l~~~~~~~f~~~~~~~~p-~~-~r~~fGG~~~Aqal~Aa----~~tv~~-~~~~~Slh~~Fl~pg~~~~pi~~~Ve~l   75 (104)
T d1tbua1           3 LELVPLSPTSFVTKYLPAAP-VG-SKGTFGGTLVSQSLLAS----LHTVPL-NFFPTSLHSYFIKGGDPRTKITYHVQNL   75 (104)
T ss_dssp             SCEEECSSSEEEESSCC----------CCHHHHHHHHHHHH----HTTSCT-TCEEEEEEEEECSCCCTTSCCEEEEEEE
T ss_pred             eEEEEcCCCceEccCCCCCC-CC-CCceEHHHHHHHHHHHH----HhhCCc-cccceeEEEEEecCCCCCceEEEEEEee
Confidence            35666777764433222221 22 34579999998865432    222332 2456789999999999998999999999


Q ss_pred             EeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          107 NLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       107 ~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      |.||+.+..+++++.                          +|++|.++++.|.
T Consensus        76 rdGrsf~~r~V~a~Q--------------------------~g~~~~~~~aSF~  103 (104)
T d1tbua1          76 RNGRNFIHKQVSAYQ--------------------------HDKLIFTSMILFA  103 (104)
T ss_dssp             EECSSEEEEEEEEEE--------------------------TTEEEEEEEEEEE
T ss_pred             eCCccEEEEEEEEEE--------------------------CCEEEEEEEEEEe
Confidence            999999999999994                          6899999999885

>d1iq6a_ d.38.1.4 (A:) (R)-specific enoyl-CoA hydratase {Aeromonas caviae [TaxId: 648]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: MaoC-like
domain: (R)-specific enoyl-CoA hydratase
species: Aeromonas caviae [TaxId: 648]

Probab=98.08  E-value=4.4e-05  Score=55.36  Aligned_cols=81  Identities=15%  Similarity=0.099  Sum_probs=61.9

Q ss_pred             CCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEE--eCCcEEEEEEEEEEcccccCC
Q 030085           51 FKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPIN--LGKTIQVWQVRLWKVKEVQSD  128 (183)
Q Consensus        51 ~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~--~Gr~~~~~~v~i~~~~~~~~~  128 (183)
                      .-.+||..+++++=..   .. ...++....-...++.|.+|+.+||+|.++++|+.  ..+.+..+++++.+       
T Consensus        48 ~~ia~g~~~~~~~~~~---~~-~~~~~~~~~~~~~~~rf~~Pv~~GDtl~~~~~v~~~~~~~~~v~~~~~~~n-------  116 (132)
T d1iq6a_          48 RPIVHGMLLASLFSGL---LG-QQLPGKGSIYLGQSLSFKLPVFVGDEVTAEVEVTALREDKPIATLTTRIFT-------  116 (132)
T ss_dssp             SCBCCHHHHHHHHHHH---HH-HTSSCTTCEEEEEEEEECSCCBTTCEEEEEEEEEEECSSSSEEEEEEEEEC-------
T ss_pred             ceeeehhhhhhHHhhc---ch-hhcCCCcceeehhhceecccCCCcCEEEEEEEEEEEEcCCCEEEEEEEEEE-------
Confidence            4578998887775432   22 22334445556679999999999999999999885  46678888999988       


Q ss_pred             CCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          129 DGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                                        ++|++|+.++++.+
T Consensus       117 ------------------q~g~~V~~g~a~v~  130 (132)
T d1iq6a_         117 ------------------QGGALAVTGEAVVK  130 (132)
T ss_dssp             ------------------TTSCEEEEEEEEEE
T ss_pred             ------------------CCCCEEEEEEEEEE
Confidence                              78999999999876

>d1q6wa_ d.38.1.4 (A:) Monoamine oxidase regulatory protein {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: MaoC-like
domain: Monoamine oxidase regulatory protein
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.89  E-value=0.00023  Score=52.21  Aligned_cols=84  Identities=13%  Similarity=0.135  Sum_probs=54.5

Q ss_pred             cccHHHHHHHHHHHHHHHHHHhcC-CceeEEE-EEeEEEecCCCCCCEEEEEEEEEE----eCCc-EEEEEEEEEEcccc
Q 030085           53 VLHGGVSALIAESLASMGAHMASG-FKRVAGV-QLTINHLKSAELGDLVRAVATPIN----LGKT-IQVWQVRLWKVKEV  125 (183)
Q Consensus        53 ~lHGG~~a~LaD~A~g~a~~~~~~-~~~~vTv-~l~i~flrpa~~Gd~l~a~a~vi~----~Gr~-~~~~~v~i~~~~~~  125 (183)
                      .+||..+.+++=.+..-....... ......+ .-++.|++|+..||+|+++++|+.    .+++ +..++++++|    
T Consensus        57 ia~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~f~~Pv~~GDtl~~~~~V~~~~~~~~~~~~v~~~~~~~n----  132 (151)
T d1q6wa_          57 IAQGMLVLSIALGMVDQVILSNYDVSSVIAFFGIKDVRFLRPVFIGDTIAASAEVVEKQDFDEKSGVVTYKLEVKN----  132 (151)
T ss_dssp             BCCHHHHHHHHHHHHHHHHHTTSBGGGEEEEEEEEEEEECSCCBTTCEEEEEEEEEEEEEEETTEEEEEEEEEEEC----
T ss_pred             cchhHHHHHHHHHHHHHHhhcccccccceEEeeeeEEEEccccCCCCEEEEEEEEEEEEEeCCCCEEEEEEEEEEE----
Confidence            478877766654332222211111 1112222 237899999999999999998873    3444 4557888887    


Q ss_pred             cCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          126 QSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                                           ++|++|+.++.+.++
T Consensus       133 ---------------------q~g~~V~~~~~~~li  147 (151)
T d1q6wa_         133 ---------------------QRGELVLTALYSALI  147 (151)
T ss_dssp             ---------------------TTSCEEEEEEEEEEE
T ss_pred             ---------------------CCCCEEEEEEEEEEE
Confidence                                 789999999999884

>d1c8ua1 d.38.1.3 (A:2-115) Thioesterase II (TesB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: Acyl-CoA thioesterase
domain: Thioesterase II (TesB)
species: Escherichia coli [TaxId: 562]

Probab=97.80  E-value=0.00053  Score=50.09  Aligned_cols=101  Identities=12%  Similarity=0.030  Sum_probs=75.1

Q ss_pred             hhhcCCEEEEEeCCEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEE
Q 030085           22 LKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRA  101 (183)
Q Consensus        22 ~~~Lg~~~~~~~~g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a  101 (183)
                      ...|.  ++.++++..+..-     .-.+.+.++||-+.+-+=.|   |..+ .+. ...--+++..||+|+..+.+|..
T Consensus         8 l~~l~--le~i~~~~f~g~~-----~~~~~~~vfGG~v~AQal~A---A~~t-v~~-~~~~hSlh~yFl~~g~~~~pi~y   75 (114)
T d1c8ua1           8 LTLLN--LEKIEEGLFRGQS-----EDLGLRQVFGGQVVGQALYA---AKET-VPE-ERLVHSFHSYFLRPGDSKKPIIY   75 (114)
T ss_dssp             HHHHS--CEEEETTEEEECC-----CCSSCSBCCHHHHHHHHHHH---HHHT-SCT-TCEEEEEEEEECSCCBTTSCEEE
T ss_pred             HHhcC--cEEecCCeEECcC-----CCCCCcceehHHHHHHHHHH---HHhh-CCC-CCCccccceEecCCCCCCCCEEE
Confidence            34444  4566777655421     22335678999998876544   2232 333 23456899999999999999999


Q ss_pred             EEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          102 VATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       102 ~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      +-+.+|.||+.+.-+|+.+.                          +|++|.++++.|.
T Consensus        76 ~V~~lrdGrsf~tR~V~a~Q--------------------------~g~~if~~~~SF~  108 (114)
T d1c8ua1          76 DVETLRDGNSFSARRVAAIQ--------------------------NGKPIFYMTASFQ  108 (114)
T ss_dssp             EEEEEEECSSEEEEEEEEEE--------------------------TTEEEEEEEEEEE
T ss_pred             EeEEeecCCceEEEEEEEEE--------------------------CCEEEEEEEEecc
Confidence            99999999999999999994                          6899999999887

>d2bi0a1 d.38.1.4 (A:8-185) Hypothetical protein Rv0216/MT0226 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: MaoC-like
domain: Hypothetical protein Rv0216/MT0226
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.59  E-value=0.00062  Score=52.17  Aligned_cols=81  Identities=9%  Similarity=0.058  Sum_probs=57.6

Q ss_pred             CcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEe----C---C---cEEEEEEEEEE
Q 030085           52 KVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINL----G---K---TIQVWQVRLWK  121 (183)
Q Consensus        52 G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~----G---r---~~~~~~v~i~~  121 (183)
                      -.+||+.+++++--.   ... ........-...++.|++|+..||+|+++.+|+..    .   |   -+..++.+++|
T Consensus        59 ~ia~g~~~~~l~~~~---~~~-~~~~~~a~lg~~~~rf~~PV~~GDTl~~~~eV~~~r~~~srp~~~~~GiV~~~~~~~N  134 (178)
T d2bi0a1          59 PLAHPGLVCDVAIGQ---STL-ATQRVKANLFYRGLRFHRFPAVGDTLYTRTEVVGLRANSPKPGRAPTGLAGLRMTTID  134 (178)
T ss_dssp             CBCCHHHHHHHHHHH---HTT-TTTTCSEEEEEECEEBSSCCBTTCEEEEEEEEEEEEECCCCTTSCCEEEEEEEEEEEC
T ss_pred             cccccceeeeeecce---eee-cCCCceEEEEeeeeEEeeeccCCCEEEEEEEEEEEEecCCCCCCCcceEEEEEEEEEc
Confidence            478888888775422   211 11222222223479999999999999999999853    1   1   26777888888


Q ss_pred             cccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          122 VKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                                               ++|++|+.+..+.++
T Consensus       135 -------------------------Q~ge~V~~~e~~~mi  149 (178)
T d2bi0a1         135 -------------------------RTDRLVLDFYRCAML  149 (178)
T ss_dssp             -------------------------TTCCEEEEEEEEEEE
T ss_pred             -------------------------CCCCEEEEEEEEEEE
Confidence                                     789999999999995

>d2b3na1 d.38.1.4 (A:6-159) Hypothetical protein AF1124 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: MaoC-like
domain: Hypothetical protein AF1124
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.59  E-value=0.001  Score=49.72  Aligned_cols=79  Identities=15%  Similarity=0.209  Sum_probs=61.8

Q ss_pred             CCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCC
Q 030085           51 FKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDG  130 (183)
Q Consensus        51 ~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~  130 (183)
                      .-.+||-.+++++-.+.     ...++ ...-...+++|++|+.+||+|+++++|....+....+++++++         
T Consensus        75 ~~IahG~l~~~~~~~~~-----~~~~g-~~~~~~~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~~~~~~~~---------  139 (154)
T d2b3na1          75 GRVVHGMLTTSLVSAAV-----ARLPG-TVVLLEQSFRYTSPVRIGDVVRVEGVVSGVEKNRYTIDVKCYT---------  139 (154)
T ss_dssp             SCCCCHHHHHHHHHHHH-----HTSSS-CEEEEEEEEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEE---------
T ss_pred             ceehhHHHHHHHHHHHH-----Hhccc-hhhhhhhheEEecCcCCCCEEEEEEEEEEEeCCEEEEEEEEEE---------
Confidence            35689999998865332     12233 3455678999999999999999999999988888888888886         


Q ss_pred             CCCCCCCCcCCCCCCCCCCcEEEEEEEEEEE
Q 030085          131 RDHDADHHHHNNSTSSSSSIMISSSTVTLLC  161 (183)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~  161 (183)
                                      + ++++..|+++.++
T Consensus       140 ----------------~-~~vv~~G~a~vli  153 (154)
T d2b3na1         140 ----------------G-DKVVAEGVVKVLI  153 (154)
T ss_dssp             ----------------T-TEEEEEEEEEEEE
T ss_pred             ----------------C-CEEEEEEEEEEEE
Confidence                            3 6789999998873

>d1z6ba1 d.38.1.6 (A:84-229) (3R)-hydroxymyristoyl ACP dehydrase FabZ {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: FabZ-like
domain: (3R)-hydroxymyristoyl ACP dehydrase FabZ
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.53  E-value=0.0055  Score=45.11  Aligned_cols=106  Identities=19%  Similarity=0.188  Sum_probs=67.0

Q ss_pred             EEEEEeCC-EEEEEEEcCCCC--cC---CCCcccHHHHHHHHHHHHHHHHHHh---cC---CceeEEEEE-eEEEecCCC
Q 030085           28 ELEELTPE-RIIGCFRVTQNS--CQ---PFKVLHGGVSALIAESLASMGAHMA---SG---FKRVAGVQL-TINHLKSAE   94 (183)
Q Consensus        28 ~~~~~~~g-~v~~~m~v~~~~--~N---p~G~lHGG~~a~LaD~A~g~a~~~~---~~---~~~~vTv~l-~i~flrpa~   94 (183)
                      ++.++++| ++++...++.+.  ..   |.--+.=|++  +++.++-.++...   .+   +....-..+ ++.|.+++.
T Consensus        24 ~i~~~~~g~~~~~~k~v~~~e~~f~ghfp~~Pi~Pgvl--liEa~aQ~~~~l~~~~~~~~~~~~~~l~~i~~~kf~~~v~  101 (146)
T d1z6ba1          24 KVIYMQPNKTIIGLKQVSTNEPFFNGHFPQKQIMPGVL--QIEALAQLAGILCLKSDDSQKNNLFLFAGVDGVRWKKPVL  101 (146)
T ss_dssp             EEEEEETTTEEEEEEECCTTSGGGGTSCTTSCCCCHHH--HHHHHHHHHHHHHHHHC----CCCEEEEEEEEEEECSCCC
T ss_pred             EEEEEeCCceEEEEEEcCCCcceeecccCCccceehHH--HHHHHHHHHHHHHHhccccccCeEEEEEEecccEEeceEe
Confidence            67778875 688887877653  21   2222333553  3344433332221   12   122334444 699999999


Q ss_pred             CCCEEEEEEEEEEeCC--cEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEE-EEEEEE
Q 030085           95 LGDLVRAVATPINLGK--TIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSS-TVTLLC  161 (183)
Q Consensus        95 ~Gd~l~a~a~vi~~Gr--~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~-t~T~~~  161 (183)
                      +||+|++++++.+..+  .++.++++++.                          +|++||++ ..||++
T Consensus       102 PGd~l~i~~~i~~~~~~~~i~~~~~~a~v--------------------------~g~~v~~~~el~f~i  145 (146)
T d1z6ba1         102 PGDTLTMQANLISFKSSLGIAKLSGVGYV--------------------------NGKVVINISEMTFAL  145 (146)
T ss_dssp             TTCEEEEEEEEEEEETTTTEEEEEEEEEE--------------------------TTEEEEEEEEEEEEE
T ss_pred             cCCEEEEEEEEEEEecCccEEEEEEEEEE--------------------------CCEEEEEeeeeEEEe
Confidence            9999999999987554  46778888885                          58898885 588874

>d1u1za_ d.38.1.6 (A:) (3R)-hydroxymyristoyl ACP dehydrase FabZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: FabZ-like
domain: (3R)-hydroxymyristoyl ACP dehydrase FabZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.50  E-value=0.0086  Score=43.86  Aligned_cols=107  Identities=18%  Similarity=0.138  Sum_probs=72.7

Q ss_pred             EEEEEe-C-CEEEEEEEcCCC--CcC---CCCcccHHH--HHHHHHHHHHHHHHHhc-CC---ceeEEEEE-eEEEecCC
Q 030085           28 ELEELT-P-ERIIGCFRVTQN--SCQ---PFKVLHGGV--SALIAESLASMGAHMAS-GF---KRVAGVQL-TINHLKSA   93 (183)
Q Consensus        28 ~~~~~~-~-g~v~~~m~v~~~--~~N---p~G~lHGG~--~a~LaD~A~g~a~~~~~-~~---~~~vTv~l-~i~flrpa   93 (183)
                      ++.+++ + ..+++...++.+  ...   |..-+.=|+  +=++|=.++.+...... ..   ...+-..+ ++.|.+|+
T Consensus        22 ~i~~~~~~g~~~~~~k~v~~~e~~~~~hfp~~pv~Pgvl~iE~maQ~~~~l~~~~~~~~~~~~~~~~l~~i~~~kf~~~v  101 (145)
T d1u1za_          22 RVVELDIEGKRIRAYKNVSINEPFFNGHFPEHPIMPGVLIIEAMAQAAGILGFKMLDVKPADGTLYYFVGSDKLRFRQPV  101 (145)
T ss_dssp             EEEEEETTTTEEEEEEECCTTSTTGGGSCTTSCCCCHHHHHHHHHHHHHHHHHHHHTCCC---CEEEEEEEEEEEECSCC
T ss_pred             EEEEEecCCCEEEEEEEecCCcccccccccCcccccchHHHHHHHHHHHHHHHhhccCCCCCCcEEEEEeceEEEEcccc
Confidence            566665 3 578888877765  332   333334443  33445544433333322 11   22333344 78899999


Q ss_pred             CCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085           94 ELGDLVRAVATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus        94 ~~Gd~l~a~a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      .+||+|++++++++..+.++.++++++.                          +|++||+++.+|.
T Consensus       102 ~PGd~L~i~v~~~~~~~~~~~~~~~~~v--------------------------~~~~v~~a~l~~a  142 (145)
T d1u1za_         102 LPGDQLQLHAKFISVKRSIWKFDCHATV--------------------------DDKPVCSAEIICA  142 (145)
T ss_dssp             CTTCEEEEEEEEEEEETTEEEEEEEEEE--------------------------TTEEEEEEEEEEE
T ss_pred             CCCCEEEEEEEEEEeeCCEEEEEEEEEE--------------------------CCEEEEEEEEEEE
Confidence            9999999999999999999999999996                          5899999998886

>d2essa2 d.38.1.8 (A:150-247) Acyl-ACP thioesterase {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: Acyl-ACP thioesterase-like
domain: Acyl-ACP thioesterase
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.44  E-value=0.00057  Score=47.12  Aligned_cols=91  Identities=9%  Similarity=0.018  Sum_probs=69.4

Q ss_pred             CEEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEE
Q 030085           35 ERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQV  114 (183)
Q Consensus        35 g~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~  114 (183)
                      ...+.+++++...+..+|.+.=.....++..++.....     ...+-..+.|+|++|+..||.|.+....+..|+..  
T Consensus         7 ~~~v~~~~vR~~D~D~~gHVNN~~Y~~~~~d~~~~~~~-----~~~~v~~i~i~Y~~e~~~gd~v~v~t~~~~~~~~~--   79 (98)
T d2essa2           7 NQPVATLTAKYSDIDINGHVNSIRYIEHILDLFPIELY-----QTKRIRRFEMAYVAESYFGDELSFFCDEVSENEFH--   79 (98)
T ss_dssp             CSCSEEEECCGGGBCTTSBBCHHHHHHHHHTTSCHHHH-----HHCCEEEEEEEECSCCBTTCEEEEEEEEEETTEEE--
T ss_pred             CceEEEEEECHHHcCccceEchHHHHHHHHHHhHHHHh-----hccceeEEEEEEcCccCCCCEEEEEEEEccCcEEE--
Confidence            34466889999999999999999999987554322221     12345678899999999999999999998888543  


Q ss_pred             EEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEE
Q 030085          115 WQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTL  159 (183)
Q Consensus       115 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~  159 (183)
                        ..+..                         .+++++|.|+..|
T Consensus        80 --~~~~~-------------------------~g~e~~~~a~~~w   97 (98)
T d2essa2          80 --VEVKK-------------------------NGSEVVCRSKVIF   97 (98)
T ss_dssp             --EEEEE-------------------------TTTEEEEEEEEEE
T ss_pred             --EEEEE-------------------------cCCEEEEEEEEEE
Confidence              34555                         5789999998876

>d2bi0a2 d.38.1.4 (A:186-337) Hypothetical protein Rv0216/MT0226 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: MaoC-like
domain: Hypothetical protein Rv0216/MT0226
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.95  E-value=0.023  Score=42.42  Aligned_cols=96  Identities=10%  Similarity=0.036  Sum_probs=60.0

Q ss_pred             EcCCCCcCC----CCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEe----CCcEE
Q 030085           42 RVTQNSCQP----FKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINL----GKTIQ  113 (183)
Q Consensus        42 ~v~~~~~Np----~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~----Gr~~~  113 (183)
                      ...|-|.+.    .-.+||+..++|+-   ++.+.. .+...+.-.--+++|++|+..||+|+++.+|+..    ++.+.
T Consensus        47 d~~plH~D~~~ag~ria~G~lt~sl~~---gl~~~~-~~~~~~~lg~~~~rf~~PV~~GDti~~~~eV~~~~~~~~~g~v  122 (152)
T d2bi0a2          47 NIAATHHDWRVSGRRLVYGGHTIGLAL---AQATRL-LPNLATVLDWESCDHTAPVHEGDTLYSELHIESAQAHADGGVL  122 (152)
T ss_dssp             CCCGGGTCTTTTSSCCCCHHHHHHHHH---HHHHHH-STTCCEEEEEEEEEECSCCCTTCEEEEEEEEEEEEECSSSEEE
T ss_pred             CCCceEcCHHHHhCCCccHHHHHHhHh---heeeec-cchhhhhheeeeeEEcccCCCCCEEEEEEEEEEEeEcCCCCEE
Confidence            344445542    45799999999854   344433 2332222222378999999999999999999743    34455


Q ss_pred             EEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEE
Q 030085          114 VWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLL  160 (183)
Q Consensus       114 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~  160 (183)
                      .++.++.+.                  +++. .+.+..|..-+.|.+
T Consensus       123 ~~r~~v~~~------------------~~~~-~q~~~~VL~~~~t~L  150 (152)
T d2bi0a2         123 GLRSLVYAV------------------SDSA-SEPDRQVLDWRFSAL  150 (152)
T ss_dssp             EEEEEEEEC------------------CSST-TSCCEEEEEEEEEEE
T ss_pred             EEEEEEEEc------------------cCcc-cCCCCEEEEEEEEee
Confidence            666677751                  1111 146778887777765

>d2c2ia1 d.38.1.4 (A:2-150) Hypothetical protein Rv0130 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: MaoC-like
domain: Hypothetical protein Rv0130
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.83  E-value=0.0029  Score=46.44  Aligned_cols=67  Identities=15%  Similarity=0.141  Sum_probs=44.2

Q ss_pred             CcccHHHHHHHHHHHHHHHHHHhc-CC-c-eeEEEEEeEEEecCCCCCCEEEEEEEEEEe-----CCcEEEEEEEEEE
Q 030085           52 KVLHGGVSALIAESLASMGAHMAS-GF-K-RVAGVQLTINHLKSAELGDLVRAVATPINL-----GKTIQVWQVRLWK  121 (183)
Q Consensus        52 G~lHGG~~a~LaD~A~g~a~~~~~-~~-~-~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~-----Gr~~~~~~v~i~~  121 (183)
                      -.+||..+++++....+   .... .. . ...--..+++|++|+.+||+|+++.+|+..     |+....+++++..
T Consensus        58 ~i~~g~~~~~l~~~~~~---~~~~~~~~~~~~~~g~~~~rf~~PV~~GDti~~~~~V~~~~~~~~g~~~~~~~~~ve~  132 (149)
T d2c2ia1          58 TIAHGFMTLALLPRLQH---QMYTVKGVKLAINYGLNKVRFPAPVPVGSRVRATSSLVGVEDLGNGTVQATVSTTVEV  132 (149)
T ss_dssp             CBCCHHHHHHTHHHHHH---TTCEESSCSCEEEEEEEEEECCSCCBTTCEEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred             ceecchhhhhhhhhhcc---ccccccccceeEeeceeEEEEeccEeeCceEEEEEEEEEEEEcCCCcEEEEEEEEEEE
Confidence            47899999998765432   1111 11 1 122334589999999999999999998842     3334566777754

>d1c8ua2 d.38.1.3 (A:116-286) Thioesterase II (TesB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: Acyl-CoA thioesterase
domain: Thioesterase II (TesB)
species: Escherichia coli [TaxId: 562]

Probab=96.70  E-value=0.005  Score=45.94  Aligned_cols=101  Identities=7%  Similarity=-0.009  Sum_probs=75.2

Q ss_pred             EEEEEEEcCCCCcCCCCcccHHHHHHHHHHHHHHHHHHhcC------CceeEEEEEeEEEecCCCCCCEEEEEEEEEEeC
Q 030085           36 RIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAHMASG------FKRVAGVQLTINHLKSAELGDLVRAVATPINLG  109 (183)
Q Consensus        36 ~v~~~m~v~~~~~Np~G~lHGG~~a~LaD~A~g~a~~~~~~------~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~G  109 (183)
                      +..+=|......-. --.+|-.++|-+.|...-..+....+      ....++++-+|-|.+|++..+.+..+.+....|
T Consensus        62 ~~~~W~R~~~~l~d-d~~~h~a~LAy~SD~~ll~ta~~~~~~~~~~~~~~~aSLDH~~wFH~~~~~~~WlL~~~~s~~a~  140 (171)
T d1c8ua2          62 HRQVWIRANGSVPD-DLRVHQYLLGYASDLNFLPVALQPHGIGFLEPGIQIATIDHSMWFHRPFNLNEWLLYSVESTSAS  140 (171)
T ss_dssp             EEEEEEEESSCCCS-CHHHHHHHHHHHTTSSSGGGGGGGGTCCTTSTTEEEEEEEEEEEECSCCCTTSCEEEEEEEEEEE
T ss_pred             eEEEEEeccCCCCc-cHHHHHHHHHHhhhhHHHHHHhhhccccccCCceeeEeeeeEEEEecCcccceeEEEEEECcccc
Confidence            44444455444322 23589999999999654222221111      134678888999999999999999999999999


Q ss_pred             CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEEEEEe
Q 030085          110 KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVTLLCN  162 (183)
Q Consensus       110 r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T~~~~  162 (183)
                      ..-++++++||+                         .+|+|||+++-..++.
T Consensus       141 ~gRgl~~g~i~~-------------------------~dG~LvAs~~QEgl~R  168 (171)
T d1c8ua2         141 SARGFVRGEFYT-------------------------QDGVLVASTVQEGVMR  168 (171)
T ss_dssp             TTEEEEEEEEEE-------------------------TTCCEEEEEEEEEEEE
T ss_pred             CCeeEEEEEEEC-------------------------CCCCEEEEEEEEEEEE
Confidence            999999999999                         7899999999888754

>d1pn2a2 d.38.1.4 (A:152-275) 2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: MaoC-like
domain: 2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.03  E-value=0.037  Score=39.29  Aligned_cols=59  Identities=15%  Similarity=0.095  Sum_probs=41.5

Q ss_pred             CcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEE
Q 030085           52 KVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLW  120 (183)
Q Consensus        52 G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i~  120 (183)
                      -++||=.+++++-.+..-   . .+    .-..++++|++|+..||+|+++++  +.++....+++++.
T Consensus        50 ~IahG~~~~~~~~~~l~~---~-~~----~~~~~~~rF~~PV~~gdtl~~~~~--~~~~~~v~~~~~v~  108 (124)
T d1pn2a2          50 PILHGMCTYGLSAKALID---K-FG----MFNEIKARFTGIVFPGETLRVLAW--KESDDTIVFQTHVV  108 (124)
T ss_dssp             CCCCHHHHHHHHHHHHHH---H-HC----CEEEEEEEECSCCCTTCEEEEEEE--ECSSSEEEEEEEET
T ss_pred             ceehhHHHHHHHHHhhhh---h-cc----ccceEEEEECCCCCCCCEEEEEEE--EecCCEEEEEEEEE
Confidence            378999888887554321   1 12    134678999999999999988776  45666666776664

>d1s9ca2 d.38.1.4 (A:10-163) 2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: MaoC-like
domain: 2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.83  E-value=0.026  Score=41.30  Aligned_cols=59  Identities=14%  Similarity=0.144  Sum_probs=41.8

Q ss_pred             ceeEEEEEeEEEecCCCCCCEEEEEEEEEEe---CC-cEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEE
Q 030085           78 KRVAGVQLTINHLKSAELGDLVRAVATPINL---GK-TIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMIS  153 (183)
Q Consensus        78 ~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~---Gr-~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA  153 (183)
                      ...+-.+-++.|.||+.+||+|+++.++...   |+ .+.+.+. ..+                         .+|++++
T Consensus        76 ~~~lHgeq~~~~~rPi~~gd~l~~~~~v~~v~dk~~g~~~~~~~-~~~-------------------------~~ge~v~  129 (154)
T d1s9ca2          76 AKVLHGEQYLELYKPLPRAGKLKCEAVVADVLDKGSGVVIIMDV-YSY-------------------------SEKELIC  129 (154)
T ss_dssp             --CEEEEEEEEESSCCCSSEEEEEEEEEEEEC-----CEEEEEE-EEE-------------------------SSSSEEE
T ss_pred             ccEEEeeeeEEEecCCCCCCEEEEEEEEEEEEEcCCcceeEEEE-EEc-------------------------cCCcEEE
Confidence            3467777899999999999999999999742   33 2333333 223                         5689999


Q ss_pred             EEEEEEEEe
Q 030085          154 SSTVTLLCN  162 (183)
Q Consensus       154 ~~t~T~~~~  162 (183)
                      +++.|+++.
T Consensus       130 t~~~t~~~R  138 (154)
T d1s9ca2         130 HNQFSLFLV  138 (154)
T ss_dssp             EEEEEEEC-
T ss_pred             EEEEEEEEE
Confidence            999999853

>d1s9ca1 d.38.1.4 (A:164-289) 2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: MaoC-like
domain: 2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.07  E-value=0.11  Score=36.48  Aligned_cols=63  Identities=13%  Similarity=0.051  Sum_probs=40.2

Q ss_pred             CCcccHHHHHHHHHHHHHHHHHHhcCCceeEEEEEeEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEE
Q 030085           51 FKVLHGGVSALIAESLASMGAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRL  119 (183)
Q Consensus        51 ~G~lHGG~~a~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa~~Gd~l~a~a~vi~~Gr~~~~~~v~i  119 (183)
                      .-++||=..++++-.+..   ....++....-..++++|++|+..||+|+++.++  .|+++ .+++++
T Consensus        48 ~~IahG~l~~a~~~~~~~---~~~~~~~~~~~~~~~~rF~~Pv~~gdtl~v~~~~--~~~~v-~~~~~~  110 (126)
T d1s9ca1          48 KPILHGLCTFGFSARRVL---QQFADNDVSRFKAVKARFAKPVYPGQTLQTEMWK--EGNRI-HFQTKV  110 (126)
T ss_dssp             SCCCCHHHHHHHHHHHHH---HHHSTTCGGGEEEEEEEECSCCCTTCEEEEEEEE--ETTEE-EEEEEE
T ss_pred             CccchHHHHHHHHHHHHH---HHhcccCceeEEEEEeEECCCCCCCCEEEEEEEE--cCCEE-EEEEEE
Confidence            347999887777654321   1122233344456789999999999999887765  46554 334443

>d1pn2a1 d.38.1.4 (A:4-151) 2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: MaoC-like
domain: 2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=94.61  E-value=0.094  Score=38.63  Aligned_cols=60  Identities=13%  Similarity=0.102  Sum_probs=45.6

Q ss_pred             eeEEEEEeEEEec-CCCCCCEEEEEEEEEEe---C-CcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEE
Q 030085           79 RVAGVQLTINHLK-SAELGDLVRAVATPINL---G-KTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMIS  153 (183)
Q Consensus        79 ~~vTv~l~i~flr-pa~~Gd~l~a~a~vi~~---G-r~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA  153 (183)
                      +.+=-+-.+.|.+ |.+.|+.|+++++|+-.   | .-+.+++.++++.                        ++|++|+
T Consensus        67 ~lLHGeQ~~~~h~~Pip~g~~l~~~~ri~~V~dKg~galv~~~~~~~d~------------------------~~Gelv~  122 (148)
T d1pn2a1          67 LLLHGEHYLKVHSWPPPTEGEIKTTFEPIATTPKGTNVVIVHGSKSVDN------------------------KSGELIY  122 (148)
T ss_dssp             GEEEEEEEEEECSSSCCSSEEEEEEEEEEEEEEETTEEEEEEEEEEEET------------------------TTCCEEE
T ss_pred             heeeceeEEEEeecCCCCcCEEEEEEEEEEEEEcCCCcEEEEEEEEEEC------------------------CCCcEEE
Confidence            5666777899988 89999999999987732   3 3344556667661                        5799999


Q ss_pred             EEEEEEEEe
Q 030085          154 SSTVTLLCN  162 (183)
Q Consensus       154 ~~t~T~~~~  162 (183)
                      +.+.|+++.
T Consensus       123 t~~st~~iR  131 (148)
T d1pn2a1         123 SNEATYFIR  131 (148)
T ss_dssp             EEEEEEEET
T ss_pred             EEEEEEEEE
Confidence            999999864

>d1mkaa_ d.38.1.2 (A:) beta-Hydroxydecanol thiol ester dehydrase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: beta-Hydroxydecanol thiol ester dehydrase
domain: beta-Hydroxydecanol thiol ester dehydrase
species: Escherichia coli [TaxId: 562]

Probab=93.40  E-value=1.1  Score=33.36  Aligned_cols=105  Identities=7%  Similarity=-0.087  Sum_probs=61.9

Q ss_pred             EEEEEeCC-------EEEEEEEcCCCC--cC---CC-CcccHHHHH-HHHHHHHHHHHHHhcCCceeEEEEEeEEEecCC
Q 030085           28 ELEELTPE-------RIIGCFRVTQNS--CQ---PF-KVLHGGVSA-LIAESLASMGAHMASGFKRVAGVQLTINHLKSA   93 (183)
Q Consensus        28 ~~~~~~~g-------~v~~~m~v~~~~--~N---p~-G~lHGG~~a-~LaD~A~g~a~~~~~~~~~~vTv~l~i~flrpa   93 (183)
                      ++++++++       +++....++++.  ..   |. .++=|-.+. +++..++.++......+......--++.|.+++
T Consensus        38 rV~~i~~~~g~~~~g~i~~~k~v~~~ewff~gHFp~~PvmPGvL~iEa~aQ~~~~l~~~~~~~~~~~~~~i~~~kfr~~V  117 (171)
T d1mkaa_          38 RVVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQV  117 (171)
T ss_dssp             EEEEEESSCTTTTSCEEEEEEECCTTSGGGGTTTTTSCCCCHHHHHHHHHHHHHHHHHHTTCCSEEEEEEESCEEECSCC
T ss_pred             EEEEEcCCCCccccceeEEEEecccccceecccccCcCcCCHHHHHHHHHHHHhHhheecCCCCceEEeecceeeEeccc
Confidence            67777663       688888877653  22   22 233333222 333433322322222222222222279999999


Q ss_pred             CCCCEE-EEE---EEEEEeCCcEEEEEEEEEEcccccCCCCCCCCCCCCcCCCCCCCCCCcEEEEEEEE
Q 030085           94 ELGDLV-RAV---ATPINLGKTIQVWQVRLWKVKEVQSDDGRDHDADHHHHNNSTSSSSSIMISSSTVT  158 (183)
Q Consensus        94 ~~Gd~l-~a~---a~vi~~Gr~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvA~~t~T  158 (183)
                      .+|+.+ +-+   .++.+.++.+++.+++++-                          +|++|++++--
T Consensus       118 ~Pgd~l~~~~i~~~~i~~~~~~~~~~~g~~~V--------------------------dgk~v~ea~~~  160 (171)
T d1mkaa_         118 LPTAKKVTYRIHFKRIVNRRLIMGLADGEVLV--------------------------DGRLIYTASDL  160 (171)
T ss_dssp             CTTCCEEEEEEEEEEEEESSSEEEEEEEEEEE--------------------------TTEEEEEEEEE
T ss_pred             cCCCeEEEEEEEEEEEEecCcEEEEEEEEEEE--------------------------CCEEEEEEeCC
Confidence            999764 322   3566678888899999995                          58999999843