Citrus Sinensis ID: 030406

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
Protein Sequence
MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHccccEEEEcccccEEEccccccccccccccccccHHHHHccccHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccccHHHHHHHHccccccccccccEEEEHHHHHHHHHHHHccccccccEEEEcccccHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHccccEEEEEccHEEEEcccccccccEEcccccccHHHHHHccccEEHHHHHHHHHHHHHHHHccccEEEEcccEEEcccccccccHHHHHHHHHHcccHHHcHHHEEcEEEHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
mvepavigTKNVIVAAAEAKVRRVVFTSSIgavymdpnrspddvvdescwsdlefckntknwyCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYetpsasgrylCAESVLHRGEVVEILAKffpeypiptk
Flexible Loop (DISEMBL)
mvepavigtknvivaaaeakvrrVVFTSsigavymdpnrspddvVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILakffpeypiptk
Low Complexity Region (SEG)
MVEPAVIGTKNvivaaaeakvrrvvFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGkavaekaaweeavaRgvdlvvvnpvlvlgpllQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK
Disordered region (IsUnstruct)
*****VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEY*****
Disordered Region (DISOPRED)
MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPI***
Disordered Region (DISEMBL)
MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK
Disordered Region (DISPRO)
MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIP**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	178	2.2.26 [Sep-21-2011]
Q9S9N9	344	Cinnamoyl-CoA reductase 1	yes	no	1.0	0.517	0.808	5e-73
Q9SAH9	332	Cinnamoyl-CoA reductase 2	no	no	1.0	0.536	0.769	3e-71
Q9CA28	321	Tetraketide alpha-pyrone	no	no	1.0	0.554	0.394	2e-34
Q9XES5	348	Bifunctional dihydroflavo	N/A	no	0.988	0.505	0.393	2e-29
P51110	337	Dihydroflavonol-4-reducta	no	no	0.983	0.519	0.384	3e-29
Q84KP0	347	Bifunctional dihydroflavo	N/A	no	0.988	0.507	0.387	5e-29
Q500U8	326	Tetraketide alpha-pyrone	no	no	1.0	0.546	0.355	2e-28
P51104	360	Dihydroflavonol-4-reducta	N/A	no	0.988	0.488	0.346	5e-27
P51102	382	Dihydroflavonol-4-reducta	no	no	0.977	0.455	0.370	8e-25
P51105	366	Dihydroflavonol-4-reducta	N/A	no	0.988	0.480	0.360	1e-24

>sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1

 Score =  273 bits (698), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 144/178 (80%), Positives = 155/178 (87%)

Query: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
           MVEPAV G K VI AAAEAKV+RVV TSSIGAVYMDPNR P+ VVDESCWSDL+FCKNTK
Sbjct: 99  MVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTK 158

Query: 61  NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
           NWYCYGK VAE+AAWE A  +GVDLVV+NPVLVLGP LQ T+NAS+ H+LKYL GSAKTY
Sbjct: 159 NWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTY 218

Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
           AN  QAYV VRDVALAH+LVYE PSASGRYL AES  HRGEVVEILAK FPEYP+PTK
Sbjct: 219 ANLTQAYVDVRDVALAHVLVYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPLPTK 276

Involved in the latter stages of lignin biosynthesis. Catalyzes one of the last steps of monolignol biosynthesis, the conversion of cinnamoyl-CoAs into their corresponding cinnamaldehydes.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 4EC: 4

>sp|Q9SAH9|CCR2_ARATH Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1

 Score =  267 bits (682), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 137/178 (76%), Positives = 156/178 (87%)

Query: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
           M+EPAV G K VI AAA+AKV+RVVFTSSIGAVYM+PNR    +VDE+CWSDL+FCKNTK
Sbjct: 94  MLEPAVNGAKFVIDAAAKAKVKRVVFTSSIGAVYMNPNRDTQAIVDENCWSDLDFCKNTK 153

Query: 61  NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
           NWYCYGK +AE++AWE A A+GVDLVV+NPVLVLGP LQS +NAS++HILKYL GSAKTY
Sbjct: 154 NWYCYGKMLAEQSAWETAKAKGVDLVVLNPVLVLGPPLQSAINASLVHILKYLTGSAKTY 213

Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
           AN  Q YV VRDVAL H+LVYE PSASGRY+ AE+ LHRGEVVEILAKFFPEYP+PTK
Sbjct: 214 ANLTQVYVDVRDVALGHVLVYEAPSASGRYILAETALHRGEVVEILAKFFPEYPLPTK 271

Cinnamoyl-CoA reductase probably involved in the formation of phenolic compounds associated with the hypersensitive response. Seems not to be involved in lignin biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 4

EC: 4

>sp|Q9CA28|TKPR2_ARATH Tetraketide alpha-pyrone reductase 2 OS=Arabidopsis thaliana GN=TKPR2 PE=2 SV=1

 Score =  145 bits (366), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 107/180 (59%), Gaps = 2/180 (1%)

Query: 1   MVEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKN 58
           +V+P + GT NV+ + A++K  ++R+V TSS  ++    + +    ++ES WSD E+CK 
Sbjct: 96  LVDPIIKGTTNVMSSCAKSKATLKRIVLTSSCSSIRYRFDATEASPLNESHWSDPEYCKR 155

Query: 59  TKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK 118
              WY Y K + E+ AW  A  +G+DLVVVNP  V+GPLL     ++++ IL    G A 
Sbjct: 156 FNLWYGYAKTLGEREAWRIAEEKGLDLVVVNPSFVVGPLLGPKPTSTLLMILAIAKGLAG 215

Query: 119 TYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
            Y N    +VH+ DV  AH+L  E P ASGR +C+ SV H  E++E++   +P YP   K
Sbjct: 216 EYPNFTVGFVHIDDVVAAHVLAMEEPKASGRIICSSSVAHWSEIIELMRNKYPNYPFENK 275

May be involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1

 Score =  128 bits (322), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 112/183 (61%), Gaps = 7/183 (3%)

Query: 1   MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT 59
           +++P + G  +++ A  +AK VR++VFTSS G V ++ ++ P  V DES WSD+EFC++ 
Sbjct: 99  VIKPTINGLLDILKACQKAKTVRKLVFTSSAGTVNVEEHQKP--VYDESNWSDVEFCRSV 156

Query: 60  K--NW-YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS 116
           K   W Y   K +AE+AAW+ A    +D + + P LV+GP L  ++  S+I  L  +  +
Sbjct: 157 KMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRN 216

Query: 117 AKTYANSVQA-YVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPI 175
              Y    Q  YVH+ D+ L+HI +YE P A GRY+C+       E+V++L + +PEY I
Sbjct: 217 ESHYGIIKQGQYVHLDDLCLSHIYLYEHPKAEGRYICSSHDATIHELVKMLREKYPEYNI 276

Query: 176 PTK 178
           PTK
Sbjct: 277 PTK 279

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, dihydrokaempferol, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), naringenin to a low extent (10%), but not 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Malus domestica (taxid: 3750)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|P51110|DFRA_VITVI Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1

 Score =  127 bits (320), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 110/182 (60%), Gaps = 7/182 (3%)

Query: 2   VEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
           ++P + G   ++ + A AK VRR+VFTSS G V +  ++ P  V DESCWSD+EFC+  K
Sbjct: 100 IKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLP--VYDESCWSDMEFCRAKK 157

Query: 61  --NW-YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA 117
              W Y   K +AE+AAW+ A    +D + + P LV+GP + S++  S+I  L  + G+ 
Sbjct: 158 MTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNE 217

Query: 118 KTYANSVQA-YVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIP 176
             Y+   Q  +VH+ D+  AHI ++E P A GRY+C+       ++ ++L + +PEY IP
Sbjct: 218 AHYSIIRQGQFVHLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIP 277

Query: 177 TK 178
           T+
Sbjct: 278 TE 279

Vitis vinifera (taxid: 29760)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|Q84KP0|DFRA_PYRCO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1

 Score =  127 bits (318), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 71/183 (38%), Positives = 112/183 (61%), Gaps = 7/183 (3%)

Query: 1   MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT 59
           +++P + G  +++ A  +AK VR++VFTSS G V ++ ++ P  V DES WSD+EFC++ 
Sbjct: 99  VIKPTINGLLDILKACQKAKTVRKLVFTSSAGTVNVEEHQKP--VYDESNWSDVEFCRSV 156

Query: 60  K--NW-YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS 116
           K   W Y   K +AE+AAW+ A    +D + + P LV+GP L  ++  S+I  L  +  +
Sbjct: 157 KMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRN 216

Query: 117 AKTYANSVQA-YVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPI 175
              Y    Q  YVH+ D+ L+HI +Y+ P A GRY+C+       E+V++L + +PEY I
Sbjct: 217 ESHYGIIKQGQYVHLDDLCLSHIYLYKHPKAEGRYICSSHDATIHELVKMLREKYPEYNI 276

Query: 176 PTK 178
           PTK
Sbjct: 277 PTK 279

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), dihydrokaempferol to a low extent (5%), but not naringenin, 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Pyrus communis (taxid: 23211)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=2 SV=1

 Score =  125 bits (313), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 104/180 (57%), Gaps = 2/180 (1%)

Query: 1   MVEPAVIGTKNVIVAAAE-AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT 59
           ++ PA+ GT NV+ +  +   ++RVV TSS   V +  +  P   +DES W+ +E CK  
Sbjct: 99  ILRPAIEGTLNVLRSCRKNPSLKRVVLTSSSSTVRIRDDFDPKIPLDESIWTSVELCKRF 158

Query: 60  KNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT 119
           + WY   K +AE+AAW+ +   G+DLV V P  ++GP L   + ++   +L  L G  + 
Sbjct: 159 QVWYALSKTLAEQAAWKFSEENGIDLVTVLPSFLVGPSLPPDLCSTASDVLGLLKGETEK 218

Query: 120 YA-NSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
           +  +    YVH+ DVA  HI+V+E  +A GRY+C+ +V+   E+V  L+  +P  PIP +
Sbjct: 219 FQWHGQMGYVHIDDVARTHIVVFEHEAAQGRYICSSNVISLEELVSFLSARYPSLPIPKR 278

Involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Is essential for pollen wall development. Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P51104|DFRA_DIACA Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1

 Score =  120 bits (301), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 109/182 (59%), Gaps = 6/182 (3%)

Query: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
           M++P + G  +++ +  +AK+RRVVFTSS G V ++  + P  V DE+CWS L+F ++ K
Sbjct: 116 MIKPTINGMLDILKSCVKAKLRRVVFTSSGGTVNVEATQKP--VYDETCWSALDFIRSVK 173

Query: 61  --NW-YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA 117
              W Y   K +AE+AAW+ A    ++ + + P LV+GP +  ++  S+I  L  +  + 
Sbjct: 174 MTGWMYFVSKILAEQAAWKYAAENNLEFISIIPPLVVGPFIMPSMPPSLITALSPITRTE 233

Query: 118 KTYANSVQA-YVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIP 176
             Y    Q  +VH+ D+ ++HI +YE P A+GRY+ +       ++ ++L + +PEY +P
Sbjct: 234 SHYTIIKQGQFVHLDDLCMSHIFLYENPKANGRYIASACAATIYDIAKMLREEYPEYNVP 293

Query: 177 TK 178
           TK
Sbjct: 294 TK 295

Dianthus caryophyllus (taxid: 3570)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51102|DFRA_ARATH Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=3 SV=2

 Score =  112 bits (281), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 67/181 (37%), Positives = 104/181 (57%), Gaps = 7/181 (3%)

Query: 2   VEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEF--CKN 58
           ++P V G   ++ A  +AK VRR VFTSS G V ++ ++   +V DE+ WSDLEF   K 
Sbjct: 100 IKPTVNGMLGIMKACVKAKTVRRFVFTSSAGTVNVEEHQK--NVYDENDWSDLEFIMSKK 157

Query: 59  TKNW-YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA 117
              W Y   K +AEKAAW+ A  +G+D + + P LV+GP + +++  S+I  L  +  + 
Sbjct: 158 MTGWMYFVSKTLAEKAAWDFAEEKGLDFISIIPTLVVGPFITTSMPPSLITALSPITRNE 217

Query: 118 KTYANSVQA-YVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIP 176
             Y+   Q  YVH+ D+  AHI +YE  +A GRY+C+        + + L   +PEY +P
Sbjct: 218 AHYSIIRQGQYVHLDDLCNAHIFLYEQAAAKGRYICSSHDATILTISKFLRPKYPEYNVP 277

Query: 177 T 177
           +
Sbjct: 278 S 278

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51105|DFRA_GERHY Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1

 Score =  112 bits (280), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 101/183 (55%), Gaps = 7/183 (3%)

Query: 1   MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEF--CK 57
           +++P + G  ++I +  +AK V+++VFTSS G V  +       V DES WSDL+F   K
Sbjct: 100 IIKPTIEGVLSIIRSCVKAKTVKKLVFTSSAGTV--NGQEKQLHVYDESHWSDLDFIYSK 157

Query: 58  NTKNW-YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS 116
               W Y   K +AEKAAW+      +  + + P LV+GP + ST   S++  L  + G+
Sbjct: 158 KMTAWMYFVSKTLAEKAAWDATKGNNISFISIIPTLVVGPFITSTFPPSLVTALSLITGN 217

Query: 117 AKTYANSVQA-YVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPI 175
              Y+   Q  YVH+ D+   HI +YE P A GRY+C+       ++ +I+   +PEY I
Sbjct: 218 EAHYSIIKQGQYVHLDDLCECHIYLYENPKAKGRYICSSHDATIHQLAKIIKDKWPEYYI 277

Query: 176 PTK 178
           PTK
Sbjct: 278 PTK 280

Gerbera hybrida (taxid: 18101)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
206574938	347	cinnamoyl-CoA reductase [Vaccinium corym	1.0	0.512	0.915	2e-91
229368456	338	cinnamoyl-CoA reductase 4 [Gossypium hir	1.0	0.526	0.915	6e-91
148607995	238	cinnamoyl CoA reductase [Corymbia citrio	1.0	0.747	0.904	1e-89
148608003	238	cinnamoyl CoA reductase [Corymbia citrio	1.0	0.747	0.904	1e-89
148608013	238	cinnamoyl CoA reductase [Corymbia citrio	1.0	0.747	0.904	1e-89
148607997	238	cinnamoyl CoA reductase [Corymbia citrio	1.0	0.747	0.904	1e-89
118640877	270	cinnamoyl CoA reductase [Corymbia citrio	1.0	0.659	0.904	1e-89
2058311	336	cinnamoyl-CoA reductase [Eucalyptus gunn	1.0	0.529	0.910	2e-89
148607993	238	cinnamoyl CoA reductase [Angophora subve	1.0	0.747	0.910	3e-89
2058313	317	cinnamoyl-CoA reductase [Eucalyptus gunn	1.0	0.561	0.910	3e-89

>gi|206574938|gb|ACI14382.1| cinnamoyl-CoA reductase [Vaccinium corymbosum]

 Score =  339 bits (870), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 163/178 (91%), Positives = 171/178 (96%)

Query: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
           MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAV MDPNR PD VVDESCWSDLEFCKNTK
Sbjct: 95  MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVTMDPNRGPDTVVDESCWSDLEFCKNTK 154

Query: 61  NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
           NWYCYGKAVAE+AAW+EA  +GVDLVVV PVLV+GPLLQ T+NASIIH+LKYLNGSAKTY
Sbjct: 155 NWYCYGKAVAEQAAWDEAKDKGVDLVVVTPVLVMGPLLQPTLNASIIHVLKYLNGSAKTY 214

Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
           ANSVQAYVHV+DVALAHILVYETPSASGRYLCAESVLHRG+VVEILAKFFPEYPIPTK
Sbjct: 215 ANSVQAYVHVKDVALAHILVYETPSASGRYLCAESVLHRGDVVEILAKFFPEYPIPTK 272

Source: Vaccinium corymbosum

Species: Vaccinium corymbosum

Genus: Vaccinium

Family: Ericaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|229368456|gb|ACQ59094.1| cinnamoyl-CoA reductase 4 [Gossypium hirsutum]

 Score =  338 bits (867), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 163/178 (91%), Positives = 169/178 (94%)

Query: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
           MVEPAVIGTKNVI+AAAEAKVRRVVFTSSIGAVYMDPNRSPD VVDESCWSDLEFCKNTK
Sbjct: 99  MVEPAVIGTKNVIMAAAEAKVRRVVFTSSIGAVYMDPNRSPDVVVDESCWSDLEFCKNTK 158

Query: 61  NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
           NWYCYGKAVAE+AAWE A  +GVDLV + PVLVLGPLLQ TVNASI+HILKYL GSAKTY
Sbjct: 159 NWYCYGKAVAEQAAWETAKEKGVDLVAITPVLVLGPLLQPTVNASIVHILKYLTGSAKTY 218

Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
           ANSVQAYVHVRDVALAH+LVYE PSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK
Sbjct: 219 ANSVQAYVHVRDVALAHLLVYENPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 276

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148607995|gb|ABQ95548.1| cinnamoyl CoA reductase [Corymbia citriodora subsp. variegata] gi|148607999|gb|ABQ95550.1| cinnamoyl CoA reductase [Corymbia citriodora subsp. variegata] gi|148608005|gb|ABQ95553.1| cinnamoyl CoA reductase [Corymbia citriodora subsp. variegata]

 Score =  333 bits (855), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 161/178 (90%), Positives = 170/178 (95%)

Query: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
           MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAV MDPNR PD VVDESCWSDLEFCK+TK
Sbjct: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKSTK 60

Query: 61  NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
           NWYCYGKAVAEKAA +EA  RGVDLVV+NPVLVLGP+LQST+NASI+HILKYL GSAKTY
Sbjct: 61  NWYCYGKAVAEKAASDEAKERGVDLVVINPVLVLGPMLQSTINASIVHILKYLTGSAKTY 120

Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
           ANSVQAYVHV+DVALAHILV+ETPSASGRYLCAESVLHRG+VVEILAKFFPEYP PTK
Sbjct: 121 ANSVQAYVHVKDVALAHILVFETPSASGRYLCAESVLHRGDVVEILAKFFPEYPFPTK 178

Source: Corymbia citriodora subsp. variegata

Species: Corymbia citriodora

Genus: Corymbia

Family: Myrtaceae

Order: Myrtales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148608003|gb|ABQ95552.1| cinnamoyl CoA reductase [Corymbia citriodora subsp. variegata] gi|148608007|gb|ABQ95554.1| cinnamoyl CoA reductase [Corymbia citriodora subsp. variegata]

 Score =  333 bits (855), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 161/178 (90%), Positives = 170/178 (95%)

Query: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
           MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAV MDPNR PD VVDESCWSDLEFCK+TK
Sbjct: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKSTK 60

Query: 61  NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
           NWYCYGKAVAEKAA +EA  RGVDLVV+NPVLVLGP+LQST+NASI+HILKYL GSAKTY
Sbjct: 61  NWYCYGKAVAEKAASDEAKERGVDLVVINPVLVLGPMLQSTINASIVHILKYLTGSAKTY 120

Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
           ANSVQAYVHV+DVALAHILV+ETPSASGRYLCAESVLHRG+VVEILAKFFPEYP PTK
Sbjct: 121 ANSVQAYVHVKDVALAHILVFETPSASGRYLCAESVLHRGDVVEILAKFFPEYPFPTK 178

Source: Corymbia citriodora subsp. variegata

Species: Corymbia citriodora

Genus: Corymbia

Family: Myrtaceae

Order: Myrtales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148608013|gb|ABQ95557.1| cinnamoyl CoA reductase [Corymbia citriodora subsp. variegata]

 Score =  333 bits (855), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 161/178 (90%), Positives = 170/178 (95%)

Query: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
           MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAV MDPNR PD VVDESCWSDLEFCK+TK
Sbjct: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKSTK 60

Query: 61  NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
           NWYCYGKAVAEKAA +EA  RGVDLVV+NPVLVLGP+LQST+NASI+HILKYL GSAKTY
Sbjct: 61  NWYCYGKAVAEKAASDEAKERGVDLVVINPVLVLGPMLQSTINASIVHILKYLTGSAKTY 120

Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
           ANSVQAYVHV+DVALAHILV+ETPSASGRYLCAESVLHRG+VVEILAKFFPEYP PTK
Sbjct: 121 ANSVQAYVHVKDVALAHILVFETPSASGRYLCAESVLHRGDVVEILAKFFPEYPFPTK 178

Source: Corymbia citriodora subsp. variegata

Species: Corymbia citriodora

Genus: Corymbia

Family: Myrtaceae

Order: Myrtales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148607997|gb|ABQ95549.1| cinnamoyl CoA reductase [Corymbia citriodora subsp. variegata]

 Score =  333 bits (855), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 161/178 (90%), Positives = 170/178 (95%)

Query: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
           MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAV MDPNR PD VVDESCWSDLEFCK+TK
Sbjct: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKSTK 60

Query: 61  NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
           NWYCYGKAVAEKAA +EA  RGVDLVV+NPVLVLGP+LQST+NASI+HILKYL GSAKTY
Sbjct: 61  NWYCYGKAVAEKAASDEAKERGVDLVVINPVLVLGPMLQSTINASIVHILKYLTGSAKTY 120

Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
           ANSVQAYVHV+DVALAHILV+ETPSASGRYLCAESVLHRG+VVEILAKFFPEYP PTK
Sbjct: 121 ANSVQAYVHVKDVALAHILVFETPSASGRYLCAESVLHRGDVVEILAKFFPEYPFPTK 178

Source: Corymbia citriodora subsp. variegata

Species: Corymbia citriodora

Genus: Corymbia

Family: Myrtaceae

Order: Myrtales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118640877|gb|ABC40968.2| cinnamoyl CoA reductase [Corymbia citriodora subsp. variegata]

 Score =  333 bits (855), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 161/178 (90%), Positives = 170/178 (95%)

Query: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
           MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAV MDPNR PD VVDESCWSDLEFCK+TK
Sbjct: 33  MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKSTK 92

Query: 61  NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
           NWYCYGKAVAEKAA +EA  RGVDLVV+NPVLVLGP+LQST+NASI+HILKYL GSAKTY
Sbjct: 93  NWYCYGKAVAEKAASDEAKERGVDLVVINPVLVLGPMLQSTINASIVHILKYLTGSAKTY 152

Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
           ANSVQAYVHV+DVALAHILV+ETPSASGRYLCAESVLHRG+VVEILAKFFPEYP PTK
Sbjct: 153 ANSVQAYVHVKDVALAHILVFETPSASGRYLCAESVLHRGDVVEILAKFFPEYPFPTK 210

Source: Corymbia citriodora subsp. variegata

Species: Corymbia citriodora

Genus: Corymbia

Family: Myrtaceae

Order: Myrtales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2058311|emb|CAA56103.1| cinnamoyl-CoA reductase [Eucalyptus gunnii]

 Score =  333 bits (853), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 162/178 (91%), Positives = 169/178 (94%)

Query: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
           MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAV MDPNR PD VVDESCWSDLEFCK+TK
Sbjct: 99  MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKSTK 158

Query: 61  NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
           NWYCYGKAVAEKAAW EA  RGVDLVV+NPVLVLGPLLQST+NASIIHILKYL GSAKTY
Sbjct: 159 NWYCYGKAVAEKAAWPEAKERGVDLVVINPVLVLGPLLQSTINASIIHILKYLTGSAKTY 218

Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
           ANSVQAYVHV+DVALAH+LV ETPSASGRYLCAESVLHRG+VVEILAKFFPEY +PTK
Sbjct: 219 ANSVQAYVHVKDVALAHVLVLETPSASGRYLCAESVLHRGDVVEILAKFFPEYNVPTK 276

Source: Eucalyptus gunnii

Species: Eucalyptus gunnii

Genus: Eucalyptus

Family: Myrtaceae

Order: Myrtales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148607993|gb|ABQ95547.1| cinnamoyl CoA reductase [Angophora subvelutina]

 Score =  332 bits (852), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 162/178 (91%), Positives = 168/178 (94%)

Query: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
           MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAV MDPNR PD VVDESCWSDLEFCK+TK
Sbjct: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKSTK 60

Query: 61  NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
           NWYCYGKAVAEKAA EEA  RGVDLVV+NPVLVLGPLLQS +NASIIHILKYL GSAKTY
Sbjct: 61  NWYCYGKAVAEKAATEEAKERGVDLVVINPVLVLGPLLQSMINASIIHILKYLTGSAKTY 120

Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
           ANSVQAYVHV+DVALAHILV+E PSASGRYLCAESVLHRG+VVEILAKFFPEYP PTK
Sbjct: 121 ANSVQAYVHVKDVALAHILVFENPSASGRYLCAESVLHRGDVVEILAKFFPEYPFPTK 178

Source: Angophora subvelutina

Species: Angophora subvelutina

Genus: Angophora

Family: Myrtaceae

Order: Myrtales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2058313|emb|CAA66063.1| cinnamoyl-CoA reductase [Eucalyptus gunnii]

 Score =  332 bits (851), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 162/178 (91%), Positives = 169/178 (94%)

Query: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
           MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAV MDPNR PD VVDESCWSDLEFCK+TK
Sbjct: 99  MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKSTK 158

Query: 61  NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
           NWYCYGKAVAEKAAW EA  RGVDLVV+NPVLVLGPLLQST+NASIIHILKYL GSAKTY
Sbjct: 159 NWYCYGKAVAEKAAWPEAKERGVDLVVINPVLVLGPLLQSTINASIIHILKYLTGSAKTY 218

Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
           ANSVQAYVHV+DVALAH+LV ETPSASGRYLCAESVLHRG+VVEILAKFFPEY +PTK
Sbjct: 219 ANSVQAYVHVKDVALAHVLVLETPSASGRYLCAESVLHRGDVVEILAKFFPEYNVPTK 276

Source: Eucalyptus gunnii

Species: Eucalyptus gunnii

Genus: Eucalyptus

Family: Myrtaceae

Order: Myrtales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
TAIR|locus:2200427	344	CCR1 "cinnamoyl coa reductase	1.0	0.517	0.606	1.3e-52
TAIR|locus:2025832	332	CCR2 "cinnamoyl coa reductase"	1.0	0.536	0.578	1.9e-51
TAIR|locus:2051008	321	CRL1 "CCR(Cinnamoyl coA:NADP o	1.0	0.554	0.351	4.2e-24
TAIR|locus:2171258	324	AT5G58490 [Arabidopsis thalian	0.426	0.234	0.460	4.4e-24
TAIR|locus:2056171	318	AT2G02400 [Arabidopsis thalian	0.432	0.242	0.389	5.5e-24
TAIR|locus:2150315	326	AT5G19440 [Arabidopsis thalian	0.994	0.542	0.344	2.6e-22
TAIR|locus:2051018	321	CRL2 "CCR(Cinnamoyl coA:NADP o	0.353	0.196	0.396	2.1e-20
TAIR|locus:2033904	325	AT1G51410 [Arabidopsis thalian	0.994	0.544	0.311	9.2e-20
TAIR|locus:2012315	322	AT1G09510 [Arabidopsis thalian	0.994	0.549	0.305	5.8e-18
TAIR|locus:2201272	321	TKPR2 "tetraketide alpha-pyron	0.421	0.233	0.386	7.1e-18

TAIR|locus:2200427 CCR1 "cinnamoyl coa reductase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
 Identities = 108/178 (60%), Positives = 116/178 (65%)

Query:     1 MVEPAVIGTKNXXXXXXXXXXXXXXFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
             MVEPAV G K                TSSIGAVYMDPNR P+ VVDESCWSDL+FCKNTK
Sbjct:    99 MVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTK 158

Query:    61 NWYCYGXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXQSTVNASIIHILKYLNGSAKTY 120
             NWYCYG              +                 Q T+NAS+ H+LKYL GSAKTY
Sbjct:   159 NWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTY 218

Query:   121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
             AN  QAYV VRDVALAH+LVYE PSASGRYL AES  HRGEVVEILAK FPEYP+PTK
Sbjct:   219 ANLTQAYVDVRDVALAHVLVYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPLPTK 276

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IDA

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

TAIR|locus:2025832 CCR2 "cinnamoyl coa reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
 Identities = 103/178 (57%), Positives = 116/178 (65%)

Query:     1 MVEPAVIGTKNXXXXXXXXXXXXXXFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
             M+EPAV G K               FTSSIGAVYM+PNR    +VDE+CWSDL+FCKNTK
Sbjct:    94 MLEPAVNGAKFVIDAAAKAKVKRVVFTSSIGAVYMNPNRDTQAIVDENCWSDLDFCKNTK 153

Query:    61 NWYCYGXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXQSTVNASIIHILKYLNGSAKTY 120
             NWYCYG              +                 QS +NAS++HILKYL GSAKTY
Sbjct:   154 NWYCYGKMLAEQSAWETAKAKGVDLVVLNPVLVLGPPLQSAINASLVHILKYLTGSAKTY 213

Query:   121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
             AN  Q YV VRDVAL H+LVYE PSASGRY+ AE+ LHRGEVVEILAKFFPEYP+PTK
Sbjct:   214 ANLTQVYVDVRDVALGHVLVYEAPSASGRYILAETALHRGEVVEILAKFFPEYPLPTK 271

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=NAS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=IDA

GO:0010200 "response to chitin" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

GO:0042754 "negative regulation of circadian rhythm" evidence=IMP

TAIR|locus:2051008 CRL1 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 63/179 (35%), Positives = 83/179 (46%)

Query:     1 MVEPAVIGTKNXXXXXXXXXXXXXXFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
             ++ PAV GT N              + SS+ A +M+P  S + V+DE+CWSD E+CK T+
Sbjct:   100 LIAPAVDGTLNVLKACIEANVKRVVYVSSVAAAFMNPMWSKNQVLDEACWSDQEYCKKTE 159

Query:    61 NWYCYGXXXXXXXXXXXXXXRXXXXXXXXXXXXXX-XXXQSTVNASIIHILKYLNGSAKT 119
             NWYC                                   Q+TVNAS + +LK L    +T
Sbjct:   160 NWYCLAKTRAESEAFEFAKRTGLHLVSVCPTLVLGPILQQNTVNASSLVLLKLLKEGFET 219

Query:   120 YANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
               N  +  V VRDVA A +LVYE   A GRY+C    +    VVE L  F+P Y  P K
Sbjct:   220 RDNQERHLVDVRDVAQALLLVYEKAEAEGRYICTSHTVKEEIVVEKLKSFYPHYNYPKK 278

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEP

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0046686 "response to cadmium ion" evidence=IEP

TAIR|locus:2171258 AT5G58490 [Arabidopsis thaliana (taxid:3702)]

 Score = 190 (71.9 bits), Expect = 4.4e-24, Sum P(2) = 4.4e-24
 Identities = 35/76 (46%), Positives = 51/76 (67%)

Query:   101 TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRG 160
             ++NAS+  +L+ L G  +TY N     VH +DVALAHILVYE P + GR+LC E++ H G
Sbjct:   201 SLNASMHMLLRLLQGCTETYENFFMGSVHFKDVALAHILVYEDPYSKGRHLCVEAISHYG 260

Query:   161 EVVEILAKFFPEYPIP 176
             + V  +A+ +P Y +P
Sbjct:   261 DFVAKVAELYPNYNVP 276

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2056171 AT2G02400 [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 5.5e-24, Sum P(2) = 5.5e-24
 Identities = 30/77 (38%), Positives = 47/77 (61%)

Query:    99 QSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLH 158
             Q  +NAS   +L+ L GS +T  +     VHV+DVA  H++++ETP ASGR+LC   +  
Sbjct:   194 QPNLNASCAVLLQLLQGSTETQEHHWLGVVHVKDVAKGHVMLFETPDASGRFLCTNGIYQ 253

Query:   159 RGEVVEILAKFFPEYPI 175
               E   +++K FPE+ +
Sbjct:   254 FSEFAALVSKLFPEFAV 270

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

TAIR|locus:2150315 AT5G19440 [Arabidopsis thaliana (taxid:3702)]

 Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 62/180 (34%), Positives = 86/180 (47%)

Query:     1 MVEPAVIGTKNXXXX-XXXXXXXXXXFTSSIGAV-YMDPNRSPDDVVDESCWSDLEFCKN 58
             +++PAV GT N                TSS+ AV Y    R+PD  VDE+ +SD E C+ 
Sbjct:   101 LIDPAVKGTLNVLNSCAKASSVKRVVVTSSMAAVGYNGKPRTPDVTVDETWFSDPELCEA 160

Query:    59 TKNWYCYGXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXQSTVNASIIHILKYLNGSAK 118
             +K WY                 +                 Q T+N S   IL  +NG AK
Sbjct:   161 SKMWYVLSKTLAEDAAWKLAKEKGLDIVTINPAMVIGPLLQPTLNTSAAAILNLING-AK 219

Query:   119 TYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
             T+ N    +V+V+DVA AHI  +E PSA+GRY   E V+H  E+V IL + +P  P+P +
Sbjct:   220 TFPNLSFGWVNVKDVANAHIQAFEVPSANGRYCLVERVVHHSEIVNILRELYPNLPLPER 279

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2051018 CRL2 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
 Identities = 25/63 (39%), Positives = 35/63 (55%)

Query:     1 MVEPAVIGTKNXXXXXXXXXXXXXXFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
             ++ PAV GT N              + SS+ AV M+P  S   V+DE+ WSD ++CK T+
Sbjct:   100 LIAPAVDGTLNVLKACVEAKVKRVVYVSSVSAVAMNPMWSKSQVLDETAWSDQDYCKKTE 159

Query:    61 NWY 63
             NWY
Sbjct:   160 NWY 162

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

TAIR|locus:2033904 AT1G51410 [Arabidopsis thaliana (taxid:3702)]

 Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 56/180 (31%), Positives = 84/180 (46%)

Query:     1 MVEPAVIGTKNXXXX-XXXXXXXXXXFTSSIGAV-YMDPNRSPDDVVDESCWSDLEFCKN 58
             +++PAV GT N                TSSI AV +    R+P+ +VDE+ ++D ++C+ 
Sbjct:   100 LLDPAVKGTINVLSSCLKTSSVKRVVLTSSIAAVAFNGMPRTPETIVDETWFADPDYCRA 159

Query:    59 TKNWYCYGXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXQSTVNASIIHILKYLNGSAK 118
             +K WY                                   Q T+N S   +L  + G A+
Sbjct:   160 SKLWYVLSKTLAENAAWKFAKENNLQLVSINPAMVIGPLLQPTLNTSAAAVLSLIKG-AQ 218

Query:   119 TYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
             T+ N+   +V+V+DVA AHI  +E P A GRY   E V H  EVV IL   +P++ +P K
Sbjct:   219 TFPNATFGWVNVKDVANAHIQAFENPDADGRYCLVERVAHYSEVVNILHDLYPDFQLPEK 278

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

TAIR|locus:2012315 AT1G09510 [Arabidopsis thaliana (taxid:3702)]

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 55/180 (30%), Positives = 83/180 (46%)

Query:     1 MVEPAVIGTKNXXXXXXXXXXXXXXF-TSSIGAV-YMDPNRSPDDVVDESCWSDLEFCKN 58
             +++PAV GT N                TSS+ AV + +P   P+D+VDESC+SD  FC  
Sbjct:    99 LIDPAVKGTLNVLKTCAKVSSVKRVIVTSSMAAVLFREPTLGPNDLVDESCFSDPNFCTE 158

Query:    59 TKNWYCYGXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXQSTVNASIIHILKYLNGSAK 118
              K WY                 +                 + ++  S+  I++ + G   
Sbjct:   159 KKLWYALSKTLAEDEAWRFAKEKGLDLVVINPGLVLGPLLKPSLTFSVNVIVELITGK-D 217

Query:   119 TYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
              + N     V VRDVALAHI  +ETPSA+GRY+    V+   ++ +IL +FFP+  +  K
Sbjct:   218 NFINKDFRLVDVRDVALAHIKAFETPSANGRYIIEGPVVTINDIEKILREFFPDLNLGNK 277

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

TAIR|locus:2201272 TKPR2 "tetraketide alpha-pyrone reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
 Identities = 29/75 (38%), Positives = 43/75 (57%)

Query:   104 ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVV 163
             ++++ IL    G A  Y N    +VH+ DV  AH+L  E P ASGR +C+ SV H  E++
Sbjct:   201 STLLMILAIAKGLAGEYPNFTVGFVHIDDVVAAHVLAMEEPKASGRIICSSSVAHWSEII 260

Query:   164 EILAKFFPEYPIPTK 178
             E++   +P YP   K
Sbjct:   261 ELMRNKYPNYPFENK 275

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0010584 "pollen exine formation" evidence=IMP

GO:0080110 "sporopollenin biosynthetic process" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9S9N9	CCR1_ARATH	1, ., 2, ., 1, ., 4, 4	0.8089	1.0	0.5174	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	178
PLN02214	342	PLN02214, PLN02214, cinnamoyl-CoA reductase	1e-101
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	3e-98
PLN02662	322	PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase	1e-60
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	1e-46
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	2e-45
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	2e-40
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	1e-39
PLN02583	297	PLN02583, PLN02583, cinnamoyl-CoA reductase	2e-38
PLN02989	325	PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase	2e-38
PLN00198	338	PLN00198, PLN00198, anthocyanidin reductase; Provi	6e-34
PLN02686	367	PLN02686, PLN02686, cinnamoyl-CoA reductase	2e-32
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	4e-30
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	1e-28
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	5e-20
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	5e-18
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	3e-10
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	7e-10
cd08946	200	cd08946, SDR_e, extended (e) SDRs	9e-10
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	5e-08
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	2e-05
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	3e-05
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	2e-04
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	2e-04
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	3e-04
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	4e-04
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	5e-04
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	8e-04
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	0.001
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	0.001
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	0.001
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	0.002
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	0.002
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	0.004
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	0.004
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	0.004
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	0.004

>gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase

 Score =  295 bits (756), Expect = e-101
 Identities = 144/178 (80%), Positives = 155/178 (87%)

Query: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
           MVEPAV G K VI AAAEAKV+RVV TSSIGAVYMDPNR P+ VVDESCWSDL+FCKNTK
Sbjct: 99  MVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTK 158

Query: 61  NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
           NWYCYGK VAE+AAWE A  +GVDLVV+NPVLVLGP LQ T+NAS+ H+LKYL GSAKTY
Sbjct: 159 NWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTY 218

Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
           AN  QAYV VRDVALAH+LVYE PSASGRYL AES  HRGEVVEILAK FPEYP+PTK
Sbjct: 219 ANLTQAYVDVRDVALAHVLVYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPLPTK 276

Length = 342

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score =  285 bits (731), Expect = 3e-98
 Identities = 107/179 (59%), Positives = 130/179 (72%), Gaps = 1/179 (0%)

Query: 1   MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT 59
           M+EPAV GT NV+ A A+AK V+RVVFTSS+ AV  +PNR    VVDESCWSDL+FCK T
Sbjct: 92  MIEPAVKGTLNVLEACAKAKSVKRVVFTSSVAAVVWNPNRGEGKVVDESCWSDLDFCKKT 151

Query: 60  KNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT 119
           K WY   K +AEKAAWE A   G+DLV VNP LV+GP LQ ++N+S   IL  L G+A+ 
Sbjct: 152 KLWYALSKTLAEKAAWEFAEENGLDLVTVNPSLVVGPFLQPSLNSSSQLILSLLKGNAEM 211

Query: 120 YANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
           Y N   A VHV DVA AHIL+YE PSASGRY+C+  V+ R E+  +LAK +P+Y IPTK
Sbjct: 212 YQNGSLALVHVDDVADAHILLYEKPSASGRYICSSHVVTRPELAALLAKKYPQYNIPTK 270

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein

 Score =  190 bits (485), Expect = 1e-60
 Identities = 87/180 (48%), Positives = 120/180 (66%), Gaps = 3/180 (1%)

Query: 1   MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAV-YMDPNRSPDDVVDESCWSDLEFCKN 58
           +++PAV GT NV+ + A+   V+RVV TSS+ AV Y     +PD VVDE+ +SD  FC+ 
Sbjct: 98  LIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEE 157

Query: 59  TKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK 118
           +K WY   K +AE+AAW+ A   G+D+V +NP +V+GPLLQ T+N S   IL  +NG A+
Sbjct: 158 SKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLING-AQ 216

Query: 119 TYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
           T+ N+   +V VRDVA AHI  +E PSASGRY   E V+H  EVV+IL + +P   +P K
Sbjct: 217 TFPNASYRWVDVRDVANAHIQAFEIPSASGRYCLVERVVHYSEVVKILHELYPTLQLPEK 276

Length = 322

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score =  153 bits (390), Expect = 1e-46
 Identities = 70/184 (38%), Positives = 98/184 (53%), Gaps = 7/184 (3%)

Query: 1   MVEPAVIGTKNVIVAA-AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCK-N 58
           +++PAV GT NV+ AA A   V+RVV TSS+ AV       P  V  E  W+DL   K N
Sbjct: 94  VIDPAVEGTLNVLEAAKAAGSVKRVVLTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSN 153

Query: 59  TKNWYCYGKAVAEKAAWE--EAVARGVDLVVVNPVLVLGPLLQST-VNASIIHILKYLNG 115
             + Y   K +AEKAAWE  +      +L+ +NP  VLGP L +  +N+S   I K L+G
Sbjct: 154 GLDAYIASKTLAEKAAWEFVKENKPKFELITINPGYVLGPSLLADELNSSNELINKLLDG 213

Query: 116 S-AKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCAESVLHRGEVVEILAKFFPEY 173
                  N    YV VRDVA AH+   E+P A+G R++ +       E+ ++L + FP+ 
Sbjct: 214 KLPAIPPNLPFGYVDVRDVADAHVRALESPEAAGQRFIVSAGPFSFQEIADLLREEFPQL 273

Query: 174 PIPT 177
             P 
Sbjct: 274 TAPF 277

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score =  151 bits (382), Expect = 2e-45
 Identities = 78/177 (44%), Positives = 112/177 (63%), Gaps = 3/177 (1%)

Query: 1   MVEPAVIGTKNVIVAAAE-AKVRRVVFTSSIGAV-YMDPNRSPDDVVDESCWSDLEFCKN 58
           +++PA+ GT NV+    E   V+RV+ TSS  AV +  P    +DVVDE+ +SD   C+ 
Sbjct: 99  LIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRE 158

Query: 59  TKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK 118
           TKNWY   K +AE AAWE A   G+D+VV+NP  + GPLLQ T+N S+  I+ ++NG   
Sbjct: 159 TKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGK-N 217

Query: 119 TYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPI 175
            + N    +V VRDVALAHI   ETPSA+GRY+    ++   ++++IL + FP+  I
Sbjct: 218 LFNNRFYRFVDVRDVALAHIKALETPSANGRYIIDGPIMSVNDIIDILRELFPDLCI 274

Length = 322

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score =  139 bits (351), Expect = 2e-40
 Identities = 72/185 (38%), Positives = 118/185 (63%), Gaps = 11/185 (5%)

Query: 1   MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT 59
           +++P V G  +++ A A+AK VRR+VFTSS G V ++ ++ P  V DE CWSDL+FC+  
Sbjct: 99  VIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKP--VYDEDCWSDLDFCRRK 156

Query: 60  K--NW-YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS 116
           K   W Y   K +AEKAAW+ A   G+D + + P LV+GP + +++  S+I  L  + G+
Sbjct: 157 KMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGN 216

Query: 117 AKTYANSVQA-YVHVRDVALAHILVYETPSASGRYLCA--ESVLHRGEVVEILAKFFPEY 173
              Y+   Q  +VH+ D+  AHI ++E P+A GRY+C+  ++ +H  ++ ++L + +PEY
Sbjct: 217 EAHYSIIKQGQFVHLDDLCNAHIFLFEHPAAEGRYICSSHDATIH--DLAKMLREKYPEY 274

Query: 174 PIPTK 178
            IP +
Sbjct: 275 NIPAR 279

Length = 351

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score =  135 bits (342), Expect = 1e-39
 Identities = 66/185 (35%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 1   MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT 59
           +++PA+ GT N + AAA AK V+R V TSS G+V +        V+DE  W+  EF  + 
Sbjct: 91  VIKPAIGGTLNALKAAAAAKSVKRFVLTSSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDP 150

Query: 60  KN--W-YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS 116
           K   W Y   K +AEKAAW+ A    +DL+ V P L +G +  S   +S    +  + G+
Sbjct: 151 KKSAWVYAASKTLAEKAAWKFADENNIDLITVIPTLTIGTIFDSETPSSSGWAMSLITGN 210

Query: 117 AKTY----ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPE 172
                         YVHV D+ LAHI   E P A GRY+C         +++ L K +P 
Sbjct: 211 EGVSPALALIPPGYYVHVVDICLAHIGCLELPIARGRYICTAGNFDWNTLLKTLRKKYPS 270

Query: 173 YPIPT 177
           Y  PT
Sbjct: 271 YTFPT 275

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase

 Score =  132 bits (335), Expect = 2e-38
 Identities = 62/164 (37%), Positives = 89/164 (54%), Gaps = 12/164 (7%)

Query: 1   MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVY--MDPNRSPDDVVDESCWSDLEFCK 57
           MV+  V    NV+ A A+   + +VVFTSS+ AV    D   +  DV DE  WSD  FC+
Sbjct: 99  MVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDV-DERSWSDQNFCR 157

Query: 58  NTKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA 117
             K W+   K ++EK AW  A+ RGV++V +N  L++GP L      +  +   YL G+A
Sbjct: 158 KFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSL------TQHN--PYLKGAA 209

Query: 118 KTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGE 161
           + Y N V   V V  +  AHI  +E  S+ GRYLC   +++  E
Sbjct: 210 QMYENGVLVTVDVNFLVDAHIRAFEDVSSYGRYLCFNHIVNTEE 253

Length = 297

>gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein

 Score =  133 bits (335), Expect = 2e-38
 Identities = 71/180 (39%), Positives = 109/180 (60%), Gaps = 3/180 (1%)

Query: 1   MVEPAVIGTKNVIVAAAE-AKVRRVVFTSSIGAVYMDPNR-SPDDVVDESCWSDLEFCKN 58
           ++ PAV GT NV+    + + V+RV+ TSS+ AV     +  P+DVVDE+ +++  F + 
Sbjct: 100 LINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEE 159

Query: 59  TKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK 118
            K WY   K +AE AAW  A    +DL+V+NP LV GP+LQ T+N S+  I++ + G   
Sbjct: 160 RKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGK-N 218

Query: 119 TYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
            +  +   +V VRDVALAH+   ETPSA+GRY+    V+   ++  +L +FFP+  I  +
Sbjct: 219 PFNTTHHRFVDVRDVALAHVKALETPSANGRYIIDGPVVTIKDIENVLREFFPDLCIADR 278

Length = 325

>gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional

 Score =  121 bits (306), Expect = 6e-34
 Identities = 69/190 (36%), Positives = 106/190 (55%), Gaps = 14/190 (7%)

Query: 1   MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT 59
           M++PA+ G  NV+ A A+AK V+RV+ TSS  AV ++       V++E  W+D+EF  + 
Sbjct: 102 MIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSE 161

Query: 60  K--NW-YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS 116
           K   W Y   K +AEKAAW+ A    +DL+ V P L+ GP L S + +S+   +  + G+
Sbjct: 162 KPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGN 221

Query: 117 AKTYANSVQ---------AYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILA 167
            +   N ++         +  HV DV  AHI + E  SASGRY+C  +     E+ + L 
Sbjct: 222 -EFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKESASGRYICCAANTSVPELAKFLI 280

Query: 168 KFFPEYPIPT 177
           K +P+Y +PT
Sbjct: 281 KRYPQYQVPT 290

Length = 338

>gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase

 Score =  118 bits (298), Expect = 2e-32
 Identities = 66/175 (37%), Positives = 91/175 (52%), Gaps = 11/175 (6%)

Query: 1   MVEPAVIGTKNVIVAAAE-AKVRRVVFTSSIGA-VYMD-PNRSPDDVVDESCWSDLEFCK 57
           M E     ++NVI A      VR+ VFTSS+ A V+          V+DE  WSD  FC+
Sbjct: 151 MAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCR 210

Query: 58  NTKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGP-LLQSTVNASIIHILKYLNGS 116
           + K WY  GK  AEKAAW  A  +G+ L  + P LV GP   +    A+I     YL G+
Sbjct: 211 DNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATI----AYLKGA 266

Query: 117 AKTYANSVQAYVHVRDVALAHILVYE---TPSASGRYLCAESVLHRGEVVEILAK 168
            +  A+ + A   V  +A AH+ VYE     +A GRY+C + V+ R +  E LA+
Sbjct: 267 QEMLADGLLATADVERLAEAHVCVYEAMGNKTAFGRYICFDHVVSREDEAEELAR 321

Length = 367

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score =  111 bits (280), Expect = 4e-30
 Identities = 66/176 (37%), Positives = 88/176 (50%), Gaps = 15/176 (8%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDE-SCWSDLEFCKNTKNWYC 64
           V GT+NV+ AA EA VRRVV TSSI A+       PD  +DE + W++  F     N Y 
Sbjct: 88  VEGTRNVLDAALEAGVRRVVHTSSIAAL----GGPPDGRIDETTPWNERPFP----NDYY 139

Query: 65  YGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSV 124
             K +AE     EA A G+D+V+VNP  V GP  +    ++ + +L YLNG    Y    
Sbjct: 140 RSKLLAELEVL-EAAAEGLDVVIVNPSAVFGPGDEGP-TSTGLDVLDYLNGKLPAYPPGG 197

Query: 125 QAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFF----PEYPIP 176
            ++V VRDVA  HI   E      RY+     L   ++ E LA+      P   IP
Sbjct: 198 TSFVDVRDVAEGHIAAMEKGRRGERYILGGENLSFKQLFETLAEITGVKPPRRTIP 253

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score =  108 bits (271), Expect = 1e-28
 Identities = 66/184 (35%), Positives = 102/184 (55%), Gaps = 13/184 (7%)

Query: 1   MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYM-DPNRSPDDVVDESCWSDLEFCKN 58
           +++PA+ GT NV+ +  ++K V+RVVFTSSI  +   D N     VVDE+C + ++   N
Sbjct: 109 VIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWN 168

Query: 59  TK--NW-YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNG 115
           TK   W Y   K + E+AA++ A   G+DLV V    V GP L  +V +SI  +L  + G
Sbjct: 169 TKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITG 228

Query: 116 SAKTYA--NSVQ------AYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILA 167
            +K ++  ++V       A VH+ D+  AHI + E   A GRY+C        E++  L+
Sbjct: 229 DSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLS 288

Query: 168 KFFP 171
           K +P
Sbjct: 289 KEYP 292

Length = 353

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 84.6 bits (209), Expect = 5e-20
 Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 15/178 (8%)

Query: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
            ++  V GT N++ AA  A V+R VF SS+  VY DP   P   +DE             
Sbjct: 88  FLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDP---PPLPIDED-----LGPPRPL 139

Query: 61  NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
           N Y   K  AE+     A   G+ +V++ P  V GP  +  +++ ++          +  
Sbjct: 140 NPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPI 199

Query: 121 ANSV------QAYVHVRDVALAHILVYETPSASGRYLCAESVLHR-GEVVEILAKFFP 171
                     + +V+V DVA A +L  E P      + + +      E+ E +A+   
Sbjct: 200 IVIGGDGSQTRDFVYVDDVADALLLALENPDGGVFNIGSGTAEITVRELAEAVAEAVG 257

Length = 314

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 79.3 bits (196), Expect = 5e-18
 Identities = 54/152 (35%), Positives = 79/152 (51%), Gaps = 9/152 (5%)

Query: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
           M    V GT+N++ AA EA V RVV+TSS+  + +   R      DE+  S L+   +  
Sbjct: 85  MYAANVEGTRNLLRAALEAGVERVVYTSSVATLGV---RGDGTPADETTPSSLD---DMI 138

Query: 61  NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPL-LQSTVNASIIHILKYLNGSAKT 119
             Y   K +AE+AA E A  +G+ +V+VNP   +GP  ++ T    I  I+ +LNG    
Sbjct: 139 GHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRI--IVDFLNGKMPA 196

Query: 120 YANSVQAYVHVRDVALAHILVYETPSASGRYL 151
           Y ++    VHV DVA  H+L  E      RY+
Sbjct: 197 YVDTGLNLVHVDDVAEGHLLALERGRIGERYI 228

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 57.3 bits (139), Expect = 3e-10
 Identities = 44/153 (28%), Positives = 60/153 (39%), Gaps = 35/153 (22%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVD-------ESCWSDLEFCKN 58
           V GT+NV+ A  +A VR +V+TSS+  V   PN     +V+       ES   D      
Sbjct: 93  VKGTQNVLDACVKAGVRVLVYTSSMEVVG--PNSYGQPIVNGDETTPYESTHQDP----- 145

Query: 59  TKNWYCYGKAVAEKAAWEE---AVARGVDLVVV--NPVLVLGP---LLQSTVNASIIHIL 110
               Y   KA+AEK   +     +  G  L      P  + G     L   +        
Sbjct: 146 ----YPESKALAEKLVLKANGSTLKNGGRLYTCALRPAGIFGEGDPFLFPFLVRL----- 196

Query: 111 KYLNGSAKTYA---NSVQAYVHVRDVALAHILV 140
              NG AK      N +   V+V +VA AHIL 
Sbjct: 197 -LKNGLAKFRTGDKNVLSDRVYVGNVAWAHILA 228

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 55.8 bits (135), Expect = 7e-10
 Identities = 40/153 (26%), Positives = 57/153 (37%), Gaps = 15/153 (9%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
           V+GT  ++ AA  A V+R VF SS   VY D    P   + E             + Y  
Sbjct: 91  VLGTLRLLEAARRAGVKRFVFASS-SEVYGDVADPP---ITEDT------PLGPLSPYAA 140

Query: 66  GKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASII-----HILKYLNGSAKTY 120
            K  AE+     A A G+  V++    V GP         +I      IL+         
Sbjct: 141 AKLAAERLVEAYARAYGLRAVILRLFNVYGPGNPDPFVTHVIPALIRRILEGKPILLLGD 200

Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCA 153
               + +++V DVA A +L  E P     Y   
Sbjct: 201 GTQRRDFLYVDDVARAILLALEHPDGGEIYNIG 233

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 55.0 bits (133), Expect = 9e-10
 Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 16/149 (10%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
           V+GT N++ AA +A V+R V+ SS  +VY  P        +E      E      + Y  
Sbjct: 58  VVGTLNLLEAARKAGVKRFVYASSA-SVYGSPE---GLPEEE------ETPPRPLSPYGV 107

Query: 66  GKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHIL--KYLNGSAKT---Y 120
            K  AE        + G+ +V++    V GP  Q      +++    + L G   T    
Sbjct: 108 SKLAAEHLLRSYGESYGLPVVILRLANVYGP-GQRPRLDGVVNDFIRRALEGKPLTVFGG 166

Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGR 149
            N  + ++HV DV  A +   E P   G 
Sbjct: 167 GNQTRDFIHVDDVVRAILHALENPLEGGG 195

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 50.8 bits (122), Expect = 5e-08
 Identities = 42/176 (23%), Positives = 67/176 (38%), Gaps = 31/176 (17%)

Query: 8   GTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGK 67
           GT++V+  AA   ++R  + S+    Y+  NR  +    E     L   +N KN Y   K
Sbjct: 103 GTEHVLELAARLDIQRFHYVSTA---YVAGNREGNIRETE-----LNPGQNFKNPYEQSK 154

Query: 68  AVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYL-------------N 114
           A AE+     A    + L V  P +V+G     T     I  L  L              
Sbjct: 155 AEAEQLVRAAATQ--IPLTVYRPSIVVGD--SKTGRIEKIDGLYELLNLLAKLGRWLPMP 210

Query: 115 GSAKTYANSVQAYVHVRDVALAHILVYETPSASGR--YLCAESVLHRGEVVEILAK 168
           G+     N     V V  VA A + + + P A+G+  +L   +     E+ ++   
Sbjct: 211 GNKGARLN----LVPVDYVADAIVYLSKKPEANGQIFHLTDPTPQTLREIADLFKS 262

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 4/95 (4%)

Query: 3   EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDL-EFCKNTKN 61
              V+GT  V+  AA  K + + + SSI     +     +  VD    S      +    
Sbjct: 109 GANVLGTAEVLRLAATGKPKPLHYVSSISVG--ETEYYSNFTVDFDEISPTRNVGQGLAG 166

Query: 62  WYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGP 96
            Y   K VAEK    EA  RG+ + +  P  + G 
Sbjct: 167 GYGRSKWVAEKLV-REAGDRGLPVTIFRPGYITGD 200

Length = 382

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 42.6 bits (101), Expect = 3e-05
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 4/90 (4%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
           V+GTK ++  AA  K++ + F S++     +   + DD   +     LE      N Y  
Sbjct: 114 VLGTKELLKLAATGKLKPLHFVSTLSVFSAEEYNALDDEESD---DMLESQNGLPNGYIQ 170

Query: 66  GKAVAEKAAWEEAVARGVDLVVVNPVLVLG 95
            K VAEK    EA  RG+ + ++ P  + G
Sbjct: 171 SKWVAEKLL-REAANRGLPVAIIRPGNIFG 199

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 37/157 (23%), Positives = 58/157 (36%), Gaps = 22/157 (14%)

Query: 2   VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKN 61
           VE  V GT NV+ AA     +RVV TS+   VY      P D      +       N   
Sbjct: 92  VETNVFGTLNVLEAACVLYRKRVVHTST-SEVYGTAQDVPIDEDHPLLYI------NKPR 144

Query: 62  W-YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQS-----TVNASIIH---ILKY 112
             Y   K  A++ A+    + G+ + ++ P    GP   +     T+ +       ++  
Sbjct: 145 SPYSASKQGADRLAYSYGRSFGLPVTIIRPFNTYGPRQSARAVIPTIISQRAIGQRLINL 204

Query: 113 LNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGR 149
            +GS     N       V+D A   I + +   A G 
Sbjct: 205 GDGSPTRDFN------FVKDTARGFIDILDAIEAVGE 235

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 17/139 (12%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYM-DPNRSPDDVVDESCWSDLEFCKNTKNWYC 64
           V GT+NV+ A     V++ V+TSS   ++      + D+         L +     + Y 
Sbjct: 91  VGGTQNVLDACQRCGVQKFVYTSSSSVIFGGQNIHNGDE--------TLPYPPLDSDMYA 142

Query: 65  YGKAVAEKAAWEEAVARGVDLVVVNPVLVLGP----LLQSTVNASIIHILKYLNGSAKTY 120
             KA+AE    E      +    + P  + GP    L+      +   ++K++ G     
Sbjct: 143 ETKAIAEIIVLEANGRDDLLTCALRPAGIFGPGDQGLVPILFEWAEKGLVKFVFGRGN-- 200

Query: 121 ANSVQAYVHVRDVALAHIL 139
            N V  + +V ++A AHIL
Sbjct: 201 -NLVD-FTYVHNLAHAHIL 217

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 39.7 bits (93), Expect = 3e-04
 Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 19/98 (19%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
           V GT+NV+ A A A V RVV TSS  AVY      PD+    +  + L            
Sbjct: 87  VDGTQNVLDACAAAGVPRVVVTSS-VAVY---GAHPDNPAPLTEDAPLR--------GSP 134

Query: 66  GKA-VAEKAAWEEAVAR------GVDLVVVNPVLVLGP 96
             A   +KA  E+ +A        +++ V+ P  +LGP
Sbjct: 135 EFAYSRDKAEVEQLLAEFRRRHPELNVTVLRPATILGP 172

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 39.2 bits (92), Expect = 4e-04
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPN--RSPDD 43
           V+ T NV+ A     V+R+VF SS   VY +     +P+D
Sbjct: 95  VLATYNVLEAMRANGVKRIVFASS-STVYGEAKVIPTPED 133

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 39.3 bits (92), Expect = 5e-04
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 24/143 (16%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
           V GT+NVI A  +  V+++V+TSS   V+   N       DES    L +    ++ Y  
Sbjct: 91  VQGTRNVIEACRKCGVKKLVYTSSASVVF---NGQDIINGDES----LPYPDKHQDAYNE 143

Query: 66  GKAVAEKAAWEEAVARGVDLVVV--NPVLVLGP----LLQSTVNASIIHILKYLNGSAKT 119
            KA+AEK    +A      L+     P  + GP    L+   + A         NG  K 
Sbjct: 144 TKALAEKLVL-KANDPESGLLTCALRPAGIFGPGDRQLVPGLLKA-------AKNGKTKF 195

Query: 120 Y---ANSVQAYVHVRDVALAHIL 139
                N++  + +V +VA AHIL
Sbjct: 196 QIGDGNNLFDFTYVENVAHAHIL 218

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 38.5 bits (90), Expect = 8e-04
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 9/91 (9%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
              T+ +  AAA   V+R VF SS+  V  +         DE            ++ Y  
Sbjct: 87  TELTRRLARAAARQGVKRFVFLSSV-KVNGEGT--VGAPFDE------TDPPAPQDAYGR 137

Query: 66  GKAVAEKAAWEEAVARGVDLVVVNPVLVLGP 96
            K  AE+A  E   + G+++V++ P +V GP
Sbjct: 138 SKLEAERALLELGASDGMEVVILRPPMVYGP 168

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 38.4 bits (90), Expect = 0.001
 Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSP 41
           V+GT N++ AA +A V+R V+ SS  +VY DP   P
Sbjct: 94  VLGTLNLLEAARKAGVKRFVYASS-SSVYGDPPYLP 128

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 37.6 bits (88), Expect = 0.001
 Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSS--IGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWY 63
           V+GT+ V+  A + K       S+  +              +DE   + L    N    Y
Sbjct: 110 VLGTREVLRLAKQMKKLPFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLGGLPNG---Y 166

Query: 64  CYGKAVAEKAAWEEAVARGVDLVVVNPVLVLG 95
              K +AE+   E   A G+ +V+  P ++ G
Sbjct: 167 TQSKWLAEQLVREA--AGGLPVVIYRPSIITG 196

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 38.0 bits (89), Expect = 0.001
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVY 34
           V+GT+NV  AA +  V++ V  S+  AV 
Sbjct: 353 VLGTENVAEAAIKNGVKKFVLISTDKAVN 381

Length = 588

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 37.3 bits (87), Expect = 0.002
 Identities = 34/142 (23%), Positives = 51/142 (35%), Gaps = 29/142 (20%)

Query: 20  KVRRVVFTSSIGAVYMDPNRSPDD--------VVDESCWSDLEFCKNTKNWYCYGKAVAE 71
           +V++ +F SS  +VY+ P R   +         V  S   D          Y  GK  AE
Sbjct: 89  RVKQYIFISS-ASVYLKPGRVITESTPLREPDAVGLSDPWD----------YGRGKRAAE 137

Query: 72  KAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS----AKTYANSVQAY 127
               E A        +V P  + GP   +   A      +   G          + VQ +
Sbjct: 138 DVLIEAAAFPYT---IVRPPYIYGPGDYTGRLA--YFFDRLARGRPILVPGDGHSLVQ-F 191

Query: 128 VHVRDVALAHILVYETPSASGR 149
           +HV+D+A A +     P A G 
Sbjct: 192 IHVKDLARALLGAAGNPKAIGG 213

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 37.1 bits (87), Expect = 0.002
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVY 34
           V+GT+NV  AA E  V + V  S+  AV 
Sbjct: 101 VLGTENVAEAAIENGVEKFVLISTDKAVN 129

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 36.8 bits (86), Expect = 0.004
 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 4/44 (9%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESC 49
           V+GT N+I A  +  V++ +F+S+  AVY +P  SP   + E+ 
Sbjct: 95  VVGTLNLIEAMLQTGVKKFIFSST-AAVYGEPTTSP---ISETS 134

Length = 329

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 36.4 bits (85), Expect = 0.004
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVY 34
            ++  V+GTKNVI AA E  V + V  S+  AV 
Sbjct: 100 AIKTNVLGTKNVIDAAIENGVEKFVCISTDKAVN 133

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 36.4 bits (85), Expect = 0.004
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 4/44 (9%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESC 49
           V+GT N++ A     V+  VF+SS  AVY +P   P   + E  
Sbjct: 97  VVGTLNLLEAMRAHGVKNFVFSSS-AAVYGEPETVP---ITEEA 136

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 36.1 bits (84), Expect = 0.004
 Identities = 14/25 (56%), Positives = 17/25 (68%)

Query: 8   GTKNVIVAAAEAKVRRVVFTSSIGA 32
           G  N+I AA +A V+R V  SSIGA
Sbjct: 88  GNINLIDAAKKAGVKRFVLVSSIGA 112

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	178
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.97
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.96
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.96
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.95
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.95
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.95
PLN02583	297	cinnamoyl-CoA reductase	99.95
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.95
PLN02650	351	dihydroflavonol-4-reductase	99.95
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.94
PLN00198	338	anthocyanidin reductase; Provisional	99.94
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.94
PLN02686	367	cinnamoyl-CoA reductase	99.94
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.93
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.93
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.93
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.93
PLN02206	442	UDP-glucuronate decarboxylase	99.93
PLN02572	442	UDP-sulfoquinovose synthase	99.93
PLN02260	668	probable rhamnose biosynthetic enzyme	99.93
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.93
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.92
PLN02427	386	UDP-apiose/xylose synthase	99.92
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.92
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.92
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.92
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.91
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.91
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.91
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.91
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.91
PLN02240	352	UDP-glucose 4-epimerase	99.91
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.9
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.9
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.9
PLN02653	340	GDP-mannose 4,6-dehydratase	99.9
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.9
PLN02996	491	fatty acyl-CoA reductase	99.89
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.89
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.88
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.87
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.87
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.86
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.84
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.83
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.83
PLN00016	378	RNA-binding protein; Provisional	99.83
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.83
PRK07201	657	short chain dehydrogenase; Provisional	99.82
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.8
PLN02778	298	3,5-epimerase/4-reductase	99.79
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.79
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.77
CHL00194	317	ycf39 Ycf39; Provisional	99.75
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.74
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.73
PLN02503	605	fatty acyl-CoA reductase 2	99.71
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.71
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.7
KOG2774	366	consensus NAD dependent epimerase [General functio	99.68
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.65
PRK05865	854	hypothetical protein; Provisional	99.62
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.6
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.6
PLN02260	668	probable rhamnose biosynthetic enzyme	99.6
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.49
PRK12320	699	hypothetical protein; Provisional	99.45
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.43
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.41
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.4
PRK06482	276	short chain dehydrogenase; Provisional	99.39
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.25
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.24
PRK08263	275	short chain dehydrogenase; Provisional	99.21
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.16
PRK07775	274	short chain dehydrogenase; Provisional	99.14
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.12
PRK06180	277	short chain dehydrogenase; Provisional	99.11
PRK06914	280	short chain dehydrogenase; Provisional	99.11
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.09
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.09
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.02
PRK07074	257	short chain dehydrogenase; Provisional	99.01
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.0
PRK07806	248	short chain dehydrogenase; Provisional	99.0
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.97
PRK09135	249	pteridine reductase; Provisional	98.96
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	98.95
PLN03209	576	translocon at the inner envelope of chloroplast su	98.91
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.88
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.87
PRK06182	273	short chain dehydrogenase; Validated	98.86
PRK05876	275	short chain dehydrogenase; Provisional	98.82
PRK05875	276	short chain dehydrogenase; Provisional	98.81
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.81
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	98.8
PRK06179	270	short chain dehydrogenase; Provisional	98.79
PRK12828	239	short chain dehydrogenase; Provisional	98.79
PRK12829	264	short chain dehydrogenase; Provisional	98.78
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	98.78
PRK08324	681	short chain dehydrogenase; Validated	98.77
PRK07060	245	short chain dehydrogenase; Provisional	98.76
PRK07067	257	sorbitol dehydrogenase; Provisional	98.76
PRK06138	252	short chain dehydrogenase; Provisional	98.76
PRK06123	248	short chain dehydrogenase; Provisional	98.75
PRK05993	277	short chain dehydrogenase; Provisional	98.74
PRK12746	254	short chain dehydrogenase; Provisional	98.74
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	98.73
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	98.73
PRK08017	256	oxidoreductase; Provisional	98.73
PRK07774	250	short chain dehydrogenase; Provisional	98.71
PRK07523	255	gluconate 5-dehydrogenase; Provisional	98.71
PRK12827	249	short chain dehydrogenase; Provisional	98.7
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	98.68
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.65
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	98.65
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.59
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	98.59
PRK09186	256	flagellin modification protein A; Provisional	98.59
PRK06500	249	short chain dehydrogenase; Provisional	98.59
PRK08628	258	short chain dehydrogenase; Provisional	98.58
PRK06128	300	oxidoreductase; Provisional	98.58
PRK06181	263	short chain dehydrogenase; Provisional	98.57
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.55
PRK07041	230	short chain dehydrogenase; Provisional	98.55
PRK06701	290	short chain dehydrogenase; Provisional	98.54
PRK09134	258	short chain dehydrogenase; Provisional	98.51
PRK08219	227	short chain dehydrogenase; Provisional	98.5
PRK07890	258	short chain dehydrogenase; Provisional	98.5
PRK08213	259	gluconate 5-dehydrogenase; Provisional	98.49
PRK07577	234	short chain dehydrogenase; Provisional	98.48
PLN02253	280	xanthoxin dehydrogenase	98.48
PRK05717	255	oxidoreductase; Validated	98.47
PRK07024	257	short chain dehydrogenase; Provisional	98.47
PRK06196	315	oxidoreductase; Provisional	98.46
PRK07453	322	protochlorophyllide oxidoreductase; Validated	98.45
PRK10538	248	malonic semialdehyde reductase; Provisional	98.45
PRK09291	257	short chain dehydrogenase; Provisional	98.45
PRK05650	270	short chain dehydrogenase; Provisional	98.44
PRK12939	250	short chain dehydrogenase; Provisional	98.43
PRK06841	255	short chain dehydrogenase; Provisional	98.43
PRK06101	240	short chain dehydrogenase; Provisional	98.42
PRK06194	287	hypothetical protein; Provisional	98.41
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.4
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.4
PRK08251	248	short chain dehydrogenase; Provisional	98.4
PRK07904	253	short chain dehydrogenase; Provisional	98.39
PRK07985	294	oxidoreductase; Provisional	98.38
PRK12824	245	acetoacetyl-CoA reductase; Provisional	98.38
PRK07825	273	short chain dehydrogenase; Provisional	98.38
PRK12747	252	short chain dehydrogenase; Provisional	98.36
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	98.36
PRK07069	251	short chain dehydrogenase; Validated	98.34
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.33
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	98.32
PRK06523	260	short chain dehydrogenase; Provisional	98.32
PRK06124	256	gluconate 5-dehydrogenase; Provisional	98.3
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.3
PRK08264	238	short chain dehydrogenase; Validated	98.29
PRK07035	252	short chain dehydrogenase; Provisional	98.28
PRK05693	274	short chain dehydrogenase; Provisional	98.28
PRK06057	255	short chain dehydrogenase; Provisional	98.27
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.27
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.26
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	98.26
PRK12743	256	oxidoreductase; Provisional	98.24
PRK08085	254	gluconate 5-dehydrogenase; Provisional	98.24
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	98.23
PRK12938	246	acetyacetyl-CoA reductase; Provisional	98.22
PRK12937	245	short chain dehydrogenase; Provisional	98.21
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	98.2
PRK07102	243	short chain dehydrogenase; Provisional	98.19
PRK07454	241	short chain dehydrogenase; Provisional	98.18
PRK08267	260	short chain dehydrogenase; Provisional	98.18
PRK07109	334	short chain dehydrogenase; Provisional	98.16
PRK07326	237	short chain dehydrogenase; Provisional	98.16
PRK08703	239	short chain dehydrogenase; Provisional	98.15
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.14
PRK06947	248	glucose-1-dehydrogenase; Provisional	98.14
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	98.14
TIGR02415	254	23BDH acetoin reductases. One member of this famil	98.13
PRK07578	199	short chain dehydrogenase; Provisional	98.13
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.1
PRK06484	520	short chain dehydrogenase; Validated	98.1
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	98.09
PRK12744	257	short chain dehydrogenase; Provisional	98.08
PRK09242	257	tropinone reductase; Provisional	98.07
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.06
PRK07576	264	short chain dehydrogenase; Provisional	98.06
PRK07856	252	short chain dehydrogenase; Provisional	98.06
PRK06198	260	short chain dehydrogenase; Provisional	98.05
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	98.05
PRK12742	237	oxidoreductase; Provisional	98.05
PRK06114	254	short chain dehydrogenase; Provisional	98.04
PRK07832	272	short chain dehydrogenase; Provisional	98.03
PRK07097	265	gluconate 5-dehydrogenase; Provisional	98.03
PRK08265	261	short chain dehydrogenase; Provisional	98.02
PRK08277	278	D-mannonate oxidoreductase; Provisional	98.01
PRK07814	263	short chain dehydrogenase; Provisional	98.01
COG2910	211	Putative NADH-flavin reductase [General function p	98.0
PRK06949	258	short chain dehydrogenase; Provisional	97.98
PRK06398	258	aldose dehydrogenase; Validated	97.97
PRK06197	306	short chain dehydrogenase; Provisional	97.95
PRK08589	272	short chain dehydrogenase; Validated	97.95
PRK06924	251	short chain dehydrogenase; Provisional	97.94
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	97.93
PRK06139	330	short chain dehydrogenase; Provisional	97.91
PRK07677	252	short chain dehydrogenase; Provisional	97.9
PRK07478	254	short chain dehydrogenase; Provisional	97.9
PRK08226	263	short chain dehydrogenase; Provisional	97.89
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.88
PRK06953	222	short chain dehydrogenase; Provisional	97.87
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.87
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	97.86
PRK05866	293	short chain dehydrogenase; Provisional	97.84
PRK08278	273	short chain dehydrogenase; Provisional	97.84
PRK05872	296	short chain dehydrogenase; Provisional	97.83
PRK07023	243	short chain dehydrogenase; Provisional	97.82
PRK09072	263	short chain dehydrogenase; Provisional	97.8
PRK06172	253	short chain dehydrogenase; Provisional	97.8
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.79
PRK08643	256	acetoin reductase; Validated	97.77
PLN02780	320	ketoreductase/ oxidoreductase	97.76
PRK07831	262	short chain dehydrogenase; Provisional	97.75
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.74
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	97.74
PRK08936	261	glucose-1-dehydrogenase; Provisional	97.73
PRK07201	657	short chain dehydrogenase; Provisional	97.71
PRK05854	313	short chain dehydrogenase; Provisional	97.69
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	97.67
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	97.66
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.64
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	97.61
PLN00015	308	protochlorophyllide reductase	97.6
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.6
PRK06483	236	dihydromonapterin reductase; Provisional	97.55
PRK07063	260	short chain dehydrogenase; Provisional	97.54
PRK05867	253	short chain dehydrogenase; Provisional	97.54
PRK06940	275	short chain dehydrogenase; Provisional	97.51
PRK05599	246	hypothetical protein; Provisional	97.41
PRK09009	235	C factor cell-cell signaling protein; Provisional	97.39
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	97.38
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	97.33
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	97.32
PRK06484	520	short chain dehydrogenase; Validated	97.3
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	97.3
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	97.29
PRK05855	582	short chain dehydrogenase; Validated	97.21
PRK07791	286	short chain dehydrogenase; Provisional	97.17
PRK08177	225	short chain dehydrogenase; Provisional	97.14
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	97.13
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	97.11
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.1
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	97.07
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	96.94
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	96.92
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	96.9
PRK08339	263	short chain dehydrogenase; Provisional	96.86
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.82
COG0300	265	DltE Short-chain dehydrogenases of various substra	96.79
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	96.74
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	96.69
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.67
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	96.66
PRK06125	259	short chain dehydrogenase; Provisional	96.6
PRK07062	265	short chain dehydrogenase; Provisional	96.56
PRK05884	223	short chain dehydrogenase; Provisional	96.54
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	96.47
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	96.32
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	96.29
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	96.18
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	96.15
PRK08340	259	glucose-1-dehydrogenase; Provisional	96.05
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	96.02
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	95.97
KOG1208	314	consensus Dehydrogenases with different specificit	95.95
PF08732	410	HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti	95.92
KOG1611	249	consensus Predicted short chain-type dehydrogenase	95.83
PRK12367	245	short chain dehydrogenase; Provisional	95.79
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	95.7
PRK08303	305	short chain dehydrogenase; Provisional	95.54
KOG0725	270	consensus Reductases with broad range of substrate	95.43
COG1028	251	FabG Dehydrogenases with different specificities (	95.37
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	95.31
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	94.98
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	93.9
PTZ00325	321	malate dehydrogenase; Provisional	93.77
PRK08862	227	short chain dehydrogenase; Provisional	93.3
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	92.34
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	90.77
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	89.37
PLN00106	323	malate dehydrogenase	88.9
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	87.16
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	85.46
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	85.33
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	82.51

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=3e-31  Score=194.00  Aligned_cols=177  Identities=53%  Similarity=0.897  Sum_probs=160.3

Q ss_pred             chhHHHHHHHHHHHHHhCC-CCEEEEeccccccccC-CCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMD-PNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~-~~~~i~~Ss~~~~~~~-~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      .+.+|.||+|+|++|++.+ |||+|++||++++... ....++..++|+.|.+.+....-..+|..+|..+|+..+++++
T Consensus       101 i~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~  180 (327)
T KOG1502|consen  101 IDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAK  180 (327)
T ss_pred             hhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence            5679999999999999987 9999999999888866 5556677799999998887777779999999999999999999


Q ss_pred             hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEEecCccCH
Q 030406           80 ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHR  159 (178)
Q Consensus        80 ~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~  159 (178)
                      +.+++.+.+.|+.|+||...+..+.+...+.+.++|......+....|||++|+|.+.+.+++.+...|+|+|.++..++
T Consensus       181 e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~~~a~GRyic~~~~~~~  260 (327)
T KOG1502|consen  181 ENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALEKPSAKGRYICVGEVVSI  260 (327)
T ss_pred             hCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHcCcccCceEEEecCcccH
Confidence            99999999999999999988866677788889999988777777777999999999999999999999999999988889


Q ss_pred             HHHHHHHHHhCCCCCCCCC
Q 030406          160 GEVVEILAKFFPEYPIPTK  178 (178)
Q Consensus       160 ~e~~~~i~~~~~~~~~p~~  178 (178)
                      .|+++.+.+.||++++|.+
T Consensus       261 ~ei~~~l~~~~P~~~ip~~  279 (327)
T KOG1502|consen  261 KEIADILRELFPDYPIPKK  279 (327)
T ss_pred             HHHHHHHHHhCCCCCCCCC
Confidence            9999999999999998863

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=4.8e-31  Score=199.62  Aligned_cols=175  Identities=81%  Similarity=1.255  Sum_probs=142.5

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.+|.+++++|++.++++|||+||.+++|+.....+...++|++|...+.+..|.+.|+.+|..+|++++.+.++.
T Consensus       100 ~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~  179 (342)
T PLN02214        100 VEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK  179 (342)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999996678875443333348898775544445678899999999999999998888


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEEecCccCHHH
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGE  161 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e  161 (178)
                      |++++++||++||||+...........+...+.+.....+++.++|||++|+|++++.+++.+..+++||++++.++++|
T Consensus       180 g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~~~~g~yn~~~~~~~~~e  259 (342)
T PLN02214        180 GVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPSASGRYLLAESARHRGE  259 (342)
T ss_pred             CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhCcccCCcEEEecCCCCHHH
Confidence            99999999999999986543223334445556666666677889999999999999999998766679998777899999


Q ss_pred             HHHHHHHhCCCCCCC
Q 030406          162 VVEILAKFFPEYPIP  176 (178)
Q Consensus       162 ~~~~i~~~~~~~~~p  176 (178)
                      +++.+++.+|..++|
T Consensus       260 l~~~i~~~~~~~~~~  274 (342)
T PLN02214        260 VVEILAKLFPEYPLP  274 (342)
T ss_pred             HHHHHHHHCCCCCCC
Confidence            999999999865554

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.97  E-value=2e-30  Score=185.68  Aligned_cols=165  Identities=25%  Similarity=0.325  Sum_probs=137.7

Q ss_pred             CchhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         1 ~~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +|+.||.||.+|+++|+++++++|||.|| +++||.+...|   ++|+.      +..|.++||.||++.|++++.++..
T Consensus        90 Yy~NNv~gTl~Ll~am~~~gv~~~vFSSt-AavYG~p~~~P---I~E~~------~~~p~NPYG~sKlm~E~iL~d~~~a  159 (329)
T COG1087          90 YYDNNVVGTLNLIEAMLQTGVKKFIFSST-AAVYGEPTTSP---ISETS------PLAPINPYGRSKLMSEEILRDAAKA  159 (329)
T ss_pred             HHhhchHhHHHHHHHHHHhCCCEEEEecc-hhhcCCCCCcc---cCCCC------CCCCCCcchhHHHHHHHHHHHHHHh
Confidence            37889999999999999999999999999 89999988877   99998      6679999999999999999999999


Q ss_pred             cCCcEEEecCCceeCCCCCC-------CChhhHHHHHHHHhCCccc---c--------CCCCcccccHHHHHHHHHHhhc
Q 030406           81 RGVDLVVVNPVLVLGPLLQS-------TVNASIIHILKYLNGSAKT---Y--------ANSVQAYVHVRDVALAHILVYE  142 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~---~--------~~~~~~~i~v~D~a~~~~~~~~  142 (178)
                      ++++++++|.+++.|....+       +....++.+.....|+.+.   +        |...||||||.|+|++.+.+++
T Consensus       160 ~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al~  239 (329)
T COG1087         160 NPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALK  239 (329)
T ss_pred             CCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHHH
Confidence            99999999999999976442       2234567777777776642   2        4568999999999999999887


Q ss_pred             CCCCC---CcEEE-ecCccCHHHHHHHHHHhCCCCCCC
Q 030406          143 TPSAS---GRYLC-AESVLHRGEVVEILAKFFPEYPIP  176 (178)
Q Consensus       143 ~~~~~---~~~~~-~~~~~s~~e~~~~i~~~~~~~~~p  176 (178)
                      .=..+   ..||+ +|...|+.|+++.+++... .++|
T Consensus       240 ~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg-~~ip  276 (329)
T COG1087         240 YLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTG-RDIP  276 (329)
T ss_pred             HHHhCCceeEEEccCCCceeHHHHHHHHHHHhC-CcCc
Confidence            52222   37887 5678999999999999873 5554

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.96  E-value=2.3e-28  Score=183.69  Aligned_cols=174  Identities=45%  Similarity=0.782  Sum_probs=134.8

Q ss_pred             chhHHHHHHHHHHHHHhC-CCCEEEEecccccc-ccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAV-YMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-~~~~~i~~Ss~~~~-~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.|+.+++++|++. +++||||+||.+++ |+.....+...++|++|.....+..+.+.|+.+|..+|.+++.|.+
T Consensus       100 ~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~  179 (322)
T PLN02986        100 IDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAK  179 (322)
T ss_pred             hHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHH
Confidence            578999999999999985 79999999995443 3432222233478887654322234568899999999999999998


Q ss_pred             hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEEecCccCH
Q 030406           80 ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHR  159 (178)
Q Consensus        80 ~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~  159 (178)
                      +++++++++||+++|||............+...+.+.. ..+.+.++|||++|+|++++.+++.+..+++||++++.+|+
T Consensus       180 ~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~v~v~Dva~a~~~al~~~~~~~~yni~~~~~s~  258 (322)
T PLN02986        180 DNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKN-LFNNRFYRFVDVRDVALAHIKALETPSANGRYIIDGPIMSV  258 (322)
T ss_pred             HhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCC-CCCCcCcceeEHHHHHHHHHHHhcCcccCCcEEEecCCCCH
Confidence            89999999999999999754332222334445555554 35667789999999999999999987766799988888999


Q ss_pred             HHHHHHHHHhCCCCCCC
Q 030406          160 GEVVEILAKFFPEYPIP  176 (178)
Q Consensus       160 ~e~~~~i~~~~~~~~~p  176 (178)
                      +|+++.+++.+|...+|
T Consensus       259 ~e~~~~i~~~~~~~~~~  275 (322)
T PLN02986        259 NDIIDILRELFPDLCIA  275 (322)
T ss_pred             HHHHHHHHHHCCCCCCC
Confidence            99999999999876654

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.96  E-value=3.9e-27  Score=176.97  Aligned_cols=174  Identities=48%  Similarity=0.802  Sum_probs=130.4

Q ss_pred             chhHHHHHHHHHHHHHhC-CCCEEEEeccccc-cccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGA-VYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-~~~~~i~~Ss~~~-~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.+++++|++. ++++|||+||.++ +|+.....+..+++|+.+.....+....+.|+.+|..+|++++.+.+
T Consensus        99 ~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~  178 (322)
T PLN02662         99 IDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAK  178 (322)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHH
Confidence            578999999999999987 8999999999544 36432222223377765432211112346899999999999999988


Q ss_pred             hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEEecCccCH
Q 030406           80 ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHR  159 (178)
Q Consensus        80 ~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~  159 (178)
                      +++++++++||+++|||............+.+.+.+.. ..+++.++|+|++|+|++++.+++.+...+.|+++++.+++
T Consensus       179 ~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~g~~~s~  257 (322)
T PLN02662        179 ENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ-TFPNASYRWVDVRDVANAHIQAFEIPSASGRYCLVERVVHY  257 (322)
T ss_pred             HcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc-cCCCCCcCeEEHHHHHHHHHHHhcCcCcCCcEEEeCCCCCH
Confidence            89999999999999999754322222233444554433 45677899999999999999999987666788877889999


Q ss_pred             HHHHHHHHHhCCCCCCC
Q 030406          160 GEVVEILAKFFPEYPIP  176 (178)
Q Consensus       160 ~e~~~~i~~~~~~~~~p  176 (178)
                      +|+++.+++.++..++|
T Consensus       258 ~e~~~~i~~~~~~~~~~  274 (322)
T PLN02662        258 SEVVKILHELYPTLQLP  274 (322)
T ss_pred             HHHHHHHHHHCCCCCCC
Confidence            99999999988765544

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.95  E-value=2.1e-27  Score=169.72  Aligned_cols=162  Identities=21%  Similarity=0.208  Sum_probs=137.7

Q ss_pred             CchhHHHHHHHHHHHHHhCCC-CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            1 MVEPAVIGTKNVIVAAAEAKV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         1 ~~~~nv~~t~~ll~~~~~~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +.++||.||.+||+++++... .||+|+|| ..|||+-... ...++|++      +..|.++|+.||+.++.+++.|.+
T Consensus        97 Fi~TNv~GT~~LLEaar~~~~~frf~HIST-DEVYG~l~~~-~~~FtE~t------p~~PsSPYSASKAasD~lVray~~  168 (340)
T COG1088          97 FIQTNVVGTYTLLEAARKYWGKFRFHHIST-DEVYGDLGLD-DDAFTETT------PYNPSSPYSASKAASDLLVRAYVR  168 (340)
T ss_pred             hhhcchHHHHHHHHHHHHhcccceEEEecc-ccccccccCC-CCCcccCC------CCCCCCCcchhhhhHHHHHHHHHH
Confidence            468999999999999999875 48999999 7999866442 11378887      678999999999999999999999


Q ss_pred             hcCCcEEEecCCceeCCCCCCCChhhHH-HHHHHHhCCc-ccc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEEe-c
Q 030406           80 ARGVDLVVVNPVLVLGPLLQSTVNASII-HILKYLNGSA-KTY--ANSVQAYVHVRDVALAHILVYETPSASGRYLCA-E  154 (178)
Q Consensus        80 ~~~~~~~i~R~~~v~G~~~~~~~~~~~~-~~~~~~~~~~-~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~  154 (178)
                      ++|++++|.|+++-|||...+-  ..++ .+.+.+.|++ |..  |.+.+||+||+|=++++..++++...++.||++ +
T Consensus       169 TYglp~~ItrcSNNYGPyqfpE--KlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~GE~YNIgg~  246 (340)
T COG1088         169 TYGLPATITRCSNNYGPYQFPE--KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKIGETYNIGGG  246 (340)
T ss_pred             HcCCceEEecCCCCcCCCcCch--hhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcCCceEEeCCC
Confidence            9999999999999999987663  4554 4557777777 444  467999999999999999999999998899874 5


Q ss_pred             CccCHHHHHHHHHHhCCC
Q 030406          155 SVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       155 ~~~s~~e~~~~i~~~~~~  172 (178)
                      ...+--|+++.|++.+.+
T Consensus       247 ~E~~Nlevv~~i~~~l~~  264 (340)
T COG1088         247 NERTNLEVVKTICELLGK  264 (340)
T ss_pred             ccchHHHHHHHHHHHhCc
Confidence            678888999999998854

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.95  E-value=3.1e-27  Score=179.34  Aligned_cols=160  Identities=18%  Similarity=0.134  Sum_probs=126.1

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.||.+|+++|++.++++|||+|| .++|+.....+   ..|++      +..|.+.|+.+|..+|++++.|.+++
T Consensus       114 ~~~Nv~gt~nll~~~~~~~~~~~v~~SS-~~vyg~~~~~~---~~e~~------~~~p~~~Y~~sK~~~e~~~~~~~~~~  183 (348)
T PRK15181        114 NSANIDGFLNMLTAARDAHVSSFTYAAS-SSTYGDHPDLP---KIEER------IGRPLSPYAVTKYVNELYADVFARSY  183 (348)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCeEEEeec-hHhhCCCCCCC---CCCCC------CCCCCChhhHHHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999 68897544333   56654      34677899999999999999998888


Q ss_pred             CCcEEEecCCceeCCCCCCC--ChhhHHHHH-HHHhCCccc-c--CCCCcccccHHHHHHHHHHhhcCCC---CCCcEEE
Q 030406           82 GVDLVVVNPVLVLGPLLQST--VNASIIHIL-KYLNGSAKT-Y--ANSVQAYVHVRDVALAHILVYETPS---ASGRYLC  152 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~--~~~~~~~~~-~~~~~~~~~-~--~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~  152 (178)
                      +++++++||+++|||+....  ....+..+. ..+.++... +  |.+.++|+|++|+|+++++++..+.   .++.||+
T Consensus       184 ~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni  263 (348)
T PRK15181        184 EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNV  263 (348)
T ss_pred             CCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEe
Confidence            99999999999999975432  112344333 455555532 3  4668999999999999988776432   3468987


Q ss_pred             -ecCccCHHHHHHHHHHhCC
Q 030406          153 -AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       153 -~~~~~s~~e~~~~i~~~~~  171 (178)
                       +++++|++|+++.+++.++
T Consensus       264 ~~g~~~s~~e~~~~i~~~~~  283 (348)
T PRK15181        264 AVGDRTSLNELYYLIRDGLN  283 (348)
T ss_pred             cCCCcEeHHHHHHHHHHHhC
Confidence             5678999999999998775

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.95  E-value=3.4e-26  Score=172.14  Aligned_cols=172  Identities=41%  Similarity=0.721  Sum_probs=130.4

Q ss_pred             chhHHHHHHHHHHHHHhC-CCCEEEEeccccccccCCCC-CCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAVYMDPNR-SPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-~~~~~i~~Ss~~~~~~~~~~-~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.+++++|.+. ++++||++||.+++++.... .+..+++|+++........+.+.|+.+|..+|++++.+.+
T Consensus       101 ~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~  180 (325)
T PLN02989        101 INPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAK  180 (325)
T ss_pred             HHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHH
Confidence            578999999999999885 57899999995444442211 1223478887554322223457899999999999999998


Q ss_pred             hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEEecCccCH
Q 030406           80 ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHR  159 (178)
Q Consensus        80 ~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~  159 (178)
                      +++++++++||+++|||+...........+...+.++.+ .+.+.++|+|++|+|++++.+++.+..++.||++++++|+
T Consensus       181 ~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~-~~~~~r~~i~v~Dva~a~~~~l~~~~~~~~~ni~~~~~s~  259 (325)
T PLN02989        181 DNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP-FNTTHHRFVDVRDVALAHVKALETPSANGRYIIDGPVVTI  259 (325)
T ss_pred             HcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCC-CCCcCcCeeEHHHHHHHHHHHhcCcccCceEEEecCCCCH
Confidence            889999999999999998654322223344455555543 3456689999999999999999887666789988889999


Q ss_pred             HHHHHHHHHhCCCCC
Q 030406          160 GEVVEILAKFFPEYP  174 (178)
Q Consensus       160 ~e~~~~i~~~~~~~~  174 (178)
                      +|+++.+++.++...
T Consensus       260 ~ei~~~i~~~~~~~~  274 (325)
T PLN02989        260 KDIENVLREFFPDLC  274 (325)
T ss_pred             HHHHHHHHHHCCCCC
Confidence            999999999997543

>PLN02583 cinnamoyl-CoA reductase

Probab=99.95  E-value=2e-26  Score=171.39  Aligned_cols=168  Identities=39%  Similarity=0.642  Sum_probs=129.3

Q ss_pred             chhHHHHHHHHHHHHHhC-CCCEEEEeccccccc-cCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAVY-MDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-~~~~~i~~Ss~~~~~-~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.||.+++++|.+. ++++||++||.++++ +.....+..+++|+.|.....+..+...|+.||..+|++++.+.+
T Consensus       100 ~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~  179 (297)
T PLN02583        100 VDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAM  179 (297)
T ss_pred             HHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHH
Confidence            578999999999999986 689999999965543 211111223478887754433333445799999999999999988


Q ss_pred             hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEEecCccC-
Q 030406           80 ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLH-  158 (178)
Q Consensus        80 ~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s-  158 (178)
                      +.|++++++||++||||......        ..+.+.....++..++|||++|+|++++++++.+...++|++.++..+ 
T Consensus       180 ~~gi~~v~lrp~~v~Gp~~~~~~--------~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~~~~~r~~~~~~~~~~  251 (297)
T PLN02583        180 DRGVNMVSINAGLLMGPSLTQHN--------PYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDVSSYGRYLCFNHIVNT  251 (297)
T ss_pred             HhCCcEEEEcCCcccCCCCCCch--------hhhcCCcccCcccCcceEEHHHHHHHHHHHhcCcccCCcEEEecCCCcc
Confidence            88999999999999999754321        123343344455677899999999999999998877789998877665 


Q ss_pred             HHHHHHHHHHhCCCCCCCC
Q 030406          159 RGEVVEILAKFFPEYPIPT  177 (178)
Q Consensus       159 ~~e~~~~i~~~~~~~~~p~  177 (178)
                      +.++++++++.+|..++|.
T Consensus       252 ~~~~~~~~~~~~p~~~~~~  270 (297)
T PLN02583        252 EEDAVKLAQMLSPLIPSPP  270 (297)
T ss_pred             HHHHHHHHHHhCCCCCCCC
Confidence            5789999999999988874

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.95  E-value=6.9e-27  Score=165.88  Aligned_cols=158  Identities=22%  Similarity=0.259  Sum_probs=127.7

Q ss_pred             chhHHHHHHHHHHHHHhC-CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      ...|+.+|..|+++++.. ++++|||+|| ..|||+......  ..|.+      .+.|.++|+.+|+++|..+++|.++
T Consensus       104 ~~nnil~t~~Lle~~~~sg~i~~fvhvST-deVYGds~~~~~--~~E~s------~~nPtnpyAasKaAaE~~v~Sy~~s  174 (331)
T KOG0747|consen  104 TKNNILSTHVLLEAVRVSGNIRRFVHVST-DEVYGDSDEDAV--VGEAS------LLNPTNPYAASKAAAEMLVRSYGRS  174 (331)
T ss_pred             hcCCchhhhhHHHHHHhccCeeEEEEecc-cceecCcccccc--ccccc------cCCCCCchHHHHHHHHHHHHHHhhc
Confidence            356999999999999987 6999999999 799998876552  12665      6689999999999999999999999


Q ss_pred             cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHh-CCc-ccc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEEe-cC
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLN-GSA-KTY--ANSVQAYVHVRDVALAHILVYETPSASGRYLCA-ES  155 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~-~~~-~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~  155 (178)
                      ++++++++|.++||||++...  ..++.+.+... +.. +..  |.+.++|+|++|+++++..+++..+.+.+||++ +.
T Consensus       175 y~lpvv~~R~nnVYGP~q~~~--klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~~geIYNIgtd~  252 (331)
T KOG0747|consen  175 YGLPVVTTRMNNVYGPNQYPE--KLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGELGEIYNIGTDD  252 (331)
T ss_pred             cCCcEEEEeccCccCCCcChH--HHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCCccceeeccCcc
Confidence            999999999999999997663  34554444322 222 333  567999999999999999999997778899874 56


Q ss_pred             ccCHHHHHHHHHHhC
Q 030406          156 VLHRGEVVEILAKFF  170 (178)
Q Consensus       156 ~~s~~e~~~~i~~~~  170 (178)
                      +.+.-|+++.+.+.+
T Consensus       253 e~~~~~l~k~i~eli  267 (331)
T KOG0747|consen  253 EMRVIDLAKDICELF  267 (331)
T ss_pred             hhhHHHHHHHHHHHH
Confidence            788777777666543

>PLN02650 dihydroflavonol-4-reductase

Probab=99.95  E-value=1.1e-25  Score=171.10  Aligned_cols=173  Identities=40%  Similarity=0.754  Sum_probs=125.8

Q ss_pred             chhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhh---hcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEF---CKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~---~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.+|.+++++|++.+ +++|||+||.+++++.....+  .++|+.|...+.   +..+.+.|+.||..+|.+++.|
T Consensus       100 ~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~--~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~  177 (351)
T PLN02650        100 IKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKP--VYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKY  177 (351)
T ss_pred             hhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCC--ccCcccCCchhhhhccccccchHHHHHHHHHHHHHHH
Confidence            5789999999999999976 789999999534443222211  146765433211   1234568999999999999999


Q ss_pred             HHhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCcccc-CCCCcccccHHHHHHHHHHhhcCCCCCCcEEEecCc
Q 030406           78 AVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY-ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESV  156 (178)
Q Consensus        78 ~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~  156 (178)
                      ++++|++++++||+++|||+........+........+..... ..+.++|+|++|++++++.+++.+..++.|++++++
T Consensus       178 ~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~~l~~~~~~~~~i~~~~~  257 (351)
T PLN02650        178 AAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFLFEHPAAEGRYICSSHD  257 (351)
T ss_pred             HHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHHHHHhcCcCcCceEEecCCC
Confidence            9999999999999999999754422222221122233433222 234589999999999999999887666688888888


Q ss_pred             cCHHHHHHHHHHhCCCCCCC
Q 030406          157 LHRGEVVEILAKFFPEYPIP  176 (178)
Q Consensus       157 ~s~~e~~~~i~~~~~~~~~p  176 (178)
                      +|++|+++.+++.++...+|
T Consensus       258 ~s~~el~~~i~~~~~~~~~~  277 (351)
T PLN02650        258 ATIHDLAKMLREKYPEYNIP  277 (351)
T ss_pred             cCHHHHHHHHHHhCcccCCC
Confidence            99999999999988755444

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.94  E-value=7.2e-26  Score=166.64  Aligned_cols=162  Identities=28%  Similarity=0.289  Sum_probs=116.5

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH--
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV--   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--   79 (178)
                      +++||.||+||+++|++++++++||+||.+++.++....+-...+|+.+.    +..+.+.|+.||..+|++++++..  
T Consensus        89 ~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~----~~~~~~~Y~~SK~~AE~~V~~a~~~~  164 (280)
T PF01073_consen   89 YKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPY----PSSPLDPYAESKALAEKAVLEANGSE  164 (280)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcc----cccccCchHHHHHHHHHHHHhhcccc
Confidence            68999999999999999999999999996544432222221113555432    234778999999999999998765  


Q ss_pred             -h--cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHh-CCc-cc--cCCCCcccccHHHHHHHHHHhhcC---C----C
Q 030406           80 -A--RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLN-GSA-KT--YANSVQAYVHVRDVALAHILVYET---P----S  145 (178)
Q Consensus        80 -~--~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~-~~~-~~--~~~~~~~~i~v~D~a~~~~~~~~~---~----~  145 (178)
                       +  ..+.++++||+.||||+.......    +.+..+ |.. ..  .++...+++|++|+|++++++.++   +    .
T Consensus       165 ~~~g~~l~t~~lRP~~IyGp~d~~~~~~----~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~  240 (280)
T PF01073_consen  165 LKNGGRLRTCALRPAGIYGPGDQRLVPR----LVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPER  240 (280)
T ss_pred             cccccceeEEEEeccEEeCcccccccch----hhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhcccccccc
Confidence             2  249999999999999986543222    222222 312 22  245679999999999999888653   2    2


Q ss_pred             C-CCcEEE-ecCccC-HHHHHHHHHHhCC
Q 030406          146 A-SGRYLC-AESVLH-RGEVVEILAKFFP  171 (178)
Q Consensus       146 ~-~~~~~~-~~~~~s-~~e~~~~i~~~~~  171 (178)
                      . +..|++ .++++. ++|+...+.+.++
T Consensus       241 ~~G~~y~itd~~p~~~~~~f~~~~~~~~G  269 (280)
T PF01073_consen  241 VAGQAYFITDGEPVPSFWDFMRPLWEALG  269 (280)
T ss_pred             CCCcEEEEECCCccCcHHHHHHHHHHHCC
Confidence            3 347866 567888 9999999998873

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.94  E-value=3.2e-25  Score=167.74  Aligned_cols=174  Identities=36%  Similarity=0.550  Sum_probs=127.9

Q ss_pred             chhHHHHHHHHHHHHHhC-CCCEEEEeccccccccCCC-CCCCCccCCCCCCchh---hhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAVYMDPN-RSPDDVVDESCWSDLE---FCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-~~~~~i~~Ss~~~~~~~~~-~~~~~~~~E~~~~~~~---~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.+++++|++. ++++|||+|| .++|+... .....+++|+.|....   .+..|.+.|+.+|..+|.+++.
T Consensus       103 ~~~nv~g~~~ll~a~~~~~~~~~~v~~SS-~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~  181 (338)
T PLN00198        103 IKPAIQGVHNVLKACAKAKSVKRVILTSS-AAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWK  181 (338)
T ss_pred             HHHHHHHHHHHHHHHHhcCCccEEEEeec-ceeeeccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHH
Confidence            478999999999999886 5899999999 56776432 1112236676543211   1224678899999999999999


Q ss_pred             HHHhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccc-cC-------CCCcccccHHHHHHHHHHhhcCCCCCC
Q 030406           77 EAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YA-------NSVQAYVHVRDVALAHILVYETPSASG  148 (178)
Q Consensus        77 ~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~i~v~D~a~~~~~~~~~~~~~~  148 (178)
                      |+++++++++++||++||||+........+..+...+.+.... .|       ++.++|+|++|++++++.+++.+...+
T Consensus       182 ~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~~~~~  261 (338)
T PLN00198        182 FAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKESASG  261 (338)
T ss_pred             HHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHHHHHHHHHHhhCcCcCC
Confidence            9998999999999999999986443222333333444454321 12       234799999999999999998876566


Q ss_pred             cEEEecCccCHHHHHHHHHHhCCCCCCC
Q 030406          149 RYLCAESVLHRGEVVEILAKFFPEYPIP  176 (178)
Q Consensus       149 ~~~~~~~~~s~~e~~~~i~~~~~~~~~p  176 (178)
                      .|++++..+|++|+++.+.+.++..++|
T Consensus       262 ~~~~~~~~~s~~el~~~i~~~~~~~~~~  289 (338)
T PLN00198        262 RYICCAANTSVPELAKFLIKRYPQYQVP  289 (338)
T ss_pred             cEEEecCCCCHHHHHHHHHHHCCCCCCC
Confidence            7887778899999999999988754443

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.94  E-value=1.8e-25  Score=173.48  Aligned_cols=163  Identities=20%  Similarity=0.309  Sum_probs=127.8

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.||.+|+++|++.++ ++||+|| .++|++....+   ++|+.+... .+..|.+.|+.+|..+|++++.+.++.
T Consensus       208 ~~~Nv~gT~nLleaa~~~g~-r~V~~SS-~~VYg~~~~~p---~~E~~~~~~-~p~~p~s~Yg~SK~~aE~~~~~y~~~~  281 (436)
T PLN02166        208 IKTNVMGTLNMLGLAKRVGA-RFLLTST-SEVYGDPLEHP---QKETYWGNV-NPIGERSCYDEGKRTAETLAMDYHRGA  281 (436)
T ss_pred             HHHHHHHHHHHHHHHHHhCC-EEEEECc-HHHhCCCCCCC---CCccccccC-CCCCCCCchHHHHHHHHHHHHHHHHHh
Confidence            56899999999999999885 8999999 68998654444   777754322 134577889999999999999999888


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHH-HHHHHHhCCccc-cC--CCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecCc
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASII-HILKYLNGSAKT-YA--NSVQAYVHVRDVALAHILVYETPSASGRYLC-AESV  156 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~~  156 (178)
                      +++++++||+++||++........+. .+.+++.+.... +|  ++.++|+|++|+++++..+++.+ ..+.||+ +++.
T Consensus       282 ~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~-~~giyNIgs~~~  360 (436)
T PLN02166        282 GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGE-HVGPFNLGNPGE  360 (436)
T ss_pred             CCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcC-CCceEEeCCCCc
Confidence            99999999999999975432222333 344555555532 34  56899999999999999998764 4568987 5678


Q ss_pred             cCHHHHHHHHHHhCC
Q 030406          157 LHRGEVVEILAKFFP  171 (178)
Q Consensus       157 ~s~~e~~~~i~~~~~  171 (178)
                      +|++|+++.+++.++
T Consensus       361 ~Si~ela~~I~~~~g  375 (436)
T PLN02166        361 FTMLELAEVVKETID  375 (436)
T ss_pred             EeHHHHHHHHHHHhC
Confidence            999999999999885

>PLN02686 cinnamoyl-CoA reductase

Probab=99.94  E-value=5.7e-25  Score=167.89  Aligned_cols=167  Identities=37%  Similarity=0.614  Sum_probs=129.7

Q ss_pred             chhHHHHHHHHHHHHHhC-CCCEEEEecccc-ccccCCC-CCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIG-AVYMDPN-RSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-~~~~~i~~Ss~~-~~~~~~~-~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      .++|+.++.+++++|++. +++||||+||.. .+|+... ......++|+.|.....+..|.+.|+.+|+.+|++++.++
T Consensus       152 ~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~  231 (367)
T PLN02686        152 AELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAA  231 (367)
T ss_pred             hhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHH
Confidence            467999999999999986 799999999953 4675321 1101237888776655555678899999999999999998


Q ss_pred             HhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC---CCCCcEEEecC
Q 030406           79 VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP---SASGRYLCAES  155 (178)
Q Consensus        79 ~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~~~~~~~~~  155 (178)
                      ++.|++++++||+++|||+.......   .+...+.+..+.+|+..++|+||+|++++++.+++..   ..+++|+++++
T Consensus       232 ~~~gl~~v~lRp~~vyGp~~~~~~~~---~~~~~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~~~~~~~~~~~yi~~g~  308 (367)
T PLN02686        232 RGKGLKLATICPALVTGPGFFRRNST---ATIAYLKGAQEMLADGLLATADVERLAEAHVCVYEAMGNKTAFGRYICFDH  308 (367)
T ss_pred             HhcCceEEEEcCCceECCCCCCCCCh---hHHHHhcCCCccCCCCCcCeEEHHHHHHHHHHHHhccCCCCCCCcEEEeCC
Confidence            88899999999999999975432111   1234555655566777778999999999999999852   33458887889


Q ss_pred             ccCHHHHHHHHHHhCC
Q 030406          156 VLHRGEVVEILAKFFP  171 (178)
Q Consensus       156 ~~s~~e~~~~i~~~~~  171 (178)
                      .++++|+++.+++.++
T Consensus       309 ~~s~~e~~~~i~~~~g  324 (367)
T PLN02686        309 VVSREDEAEELARQIG  324 (367)
T ss_pred             CccHHHHHHHHHHHcC
Confidence            9999999999999984

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.93  E-value=6.2e-25  Score=166.72  Aligned_cols=165  Identities=15%  Similarity=0.217  Sum_probs=124.4

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCC-CchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCW-SDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~-~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.++.+++++|++.+ +++||+|| ..+|+.....+   ++|+.+ ....+...|.+.|+.+|..+|++++.++++
T Consensus        92 ~~~n~~~~~~ll~aa~~~~-~~~v~~SS-~~vyg~~~~~~---~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~  166 (347)
T PRK11908         92 FELDFEANLPIVRSAVKYG-KHLVFPST-SEVYGMCPDEE---FDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGME  166 (347)
T ss_pred             HHHHHHHHHHHHHHHHhcC-CeEEEEec-ceeeccCCCcC---cCccccccccCcCCCccchHHHHHHHHHHHHHHHHHH
Confidence            5789999999999999988 79999999 58887544333   666542 111111246678999999999999999888


Q ss_pred             cCCcEEEecCCceeCCCCCCC------ChhhHHH-HHHHHhCCccc-c--CCCCcccccHHHHHHHHHHhhcCCC---CC
Q 030406           81 RGVDLVVVNPVLVLGPLLQST------VNASIIH-ILKYLNGSAKT-Y--ANSVQAYVHVRDVALAHILVYETPS---AS  147 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~------~~~~~~~-~~~~~~~~~~~-~--~~~~~~~i~v~D~a~~~~~~~~~~~---~~  147 (178)
                      ++++++++||+++|||+....      ....+.. +.++..+++.. .  |++.++|+|++|++++++.+++.+.   .+
T Consensus       167 ~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g  246 (347)
T PRK11908        167 EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDGVASG  246 (347)
T ss_pred             cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhCccccCCC
Confidence            999999999999999975321      1123333 33445555422 2  5778999999999999999998763   24


Q ss_pred             CcEEEec--CccCHHHHHHHHHHhCC
Q 030406          148 GRYLCAE--SVLHRGEVVEILAKFFP  171 (178)
Q Consensus       148 ~~~~~~~--~~~s~~e~~~~i~~~~~  171 (178)
                      +.||+++  ..+|++|+++.+++.+.
T Consensus       247 ~~yni~~~~~~~s~~e~~~~i~~~~~  272 (347)
T PRK11908        247 KIYNIGNPKNNHSVRELANKMLELAA  272 (347)
T ss_pred             CeEEeCCCCCCcCHHHHHHHHHHHhc
Confidence            5898865  36999999999998764

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.93  E-value=8.6e-25  Score=166.37  Aligned_cols=160  Identities=23%  Similarity=0.257  Sum_probs=126.3

Q ss_pred             chhHHHHHHHHHHHHHh---------CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE---------AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEK   72 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~---------~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~   72 (178)
                      +++|+.||.+++++|++         .+++++||+|| .++|+..... ..+++|+.      +..|.+.|+.+|..+|.
T Consensus        98 ~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS-~~vyg~~~~~-~~~~~E~~------~~~p~s~Y~~sK~~~e~  169 (355)
T PRK10217         98 IETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHIST-DEVYGDLHST-DDFFTETT------PYAPSSPYSASKASSDH  169 (355)
T ss_pred             HHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecc-hhhcCCCCCC-CCCcCCCC------CCCCCChhHHHHHHHHH
Confidence            57899999999999986         35789999999 6888754221 12377775      44678899999999999


Q ss_pred             HHHHHHHhcCCcEEEecCCceeCCCCCCCChhhHHH-HHHHHhCCc-ccc--CCCCcccccHHHHHHHHHHhhcCCCCCC
Q 030406           73 AAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIH-ILKYLNGSA-KTY--ANSVQAYVHVRDVALAHILVYETPSASG  148 (178)
Q Consensus        73 ~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~-~~~~~~~~~-~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~  148 (178)
                      +++.++++.+++++++||+++|||+....  ..+.. +.+...+.. +.+  |++.++|+|++|+++++..+++.+..++
T Consensus       170 ~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~--~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~~~~~~  247 (355)
T PRK10217        170 LVRAWLRTYGLPTLITNCSNNYGPYHFPE--KLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATTGKVGE  247 (355)
T ss_pred             HHHHHHHHhCCCeEEEeeeeeeCCCCCcc--cHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhcCCCCC
Confidence            99999888999999999999999986432  23333 344555554 333  5779999999999999999998865567


Q ss_pred             cEEE-ecCccCHHHHHHHHHHhCC
Q 030406          149 RYLC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       149 ~~~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                      .||+ +++.+|++|+++.+++.++
T Consensus       248 ~yni~~~~~~s~~~~~~~i~~~~~  271 (355)
T PRK10217        248 TYNIGGHNERKNLDVVETICELLE  271 (355)
T ss_pred             eEEeCCCCcccHHHHHHHHHHHhc
Confidence            8987 5678999999999998774

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.93  E-value=8.5e-25  Score=163.42  Aligned_cols=158  Identities=18%  Similarity=0.248  Sum_probs=123.0

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      ++.|+.+|.+|+++|++.++ +|||+|| .++|+.....+   .+|+.      +..|.+.|+.+|..+|++++.++.+.
T Consensus        90 ~~~n~~~t~~ll~~~~~~~~-~~i~~SS-~~vyg~~~~~~---~~E~~------~~~p~~~Y~~sK~~~E~~~~~~~~~~  158 (308)
T PRK11150         90 MDNNYQYSKELLHYCLEREI-PFLYASS-AATYGGRTDDF---IEERE------YEKPLNVYGYSKFLFDEYVRQILPEA  158 (308)
T ss_pred             HHHHHHHHHHHHHHHHHcCC-cEEEEcc-hHHhCcCCCCC---CccCC------CCCCCCHHHHHHHHHHHHHHHHHHHc
Confidence            56899999999999999887 6999999 68887653322   56664      44678899999999999999998888


Q ss_pred             CCcEEEecCCceeCCCCCCC--ChhhHHHHH-HHHhCCcc-cc-C--CCCcccccHHHHHHHHHHhhcCCCCCCcEEE-e
Q 030406           82 GVDLVVVNPVLVLGPLLQST--VNASIIHIL-KYLNGSAK-TY-A--NSVQAYVHVRDVALAHILVYETPSASGRYLC-A  153 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~--~~~~~~~~~-~~~~~~~~-~~-~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~  153 (178)
                      +++++++||+++||++....  .......+. +...+..+ .+ +  +..++|+|++|++++++.+++.. .++.||+ +
T Consensus       159 ~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~-~~~~yni~~  237 (308)
T PRK11150        159 NSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENG-VSGIFNCGT  237 (308)
T ss_pred             CCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcC-CCCeEEcCC
Confidence            99999999999999875432  112222232 34445433 23 3  45799999999999999998865 3568987 5


Q ss_pred             cCccCHHHHHHHHHHhCC
Q 030406          154 ESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       154 ~~~~s~~e~~~~i~~~~~  171 (178)
                      ++++|++|+++.+++.++
T Consensus       238 ~~~~s~~el~~~i~~~~~  255 (308)
T PRK11150        238 GRAESFQAVADAVLAYHK  255 (308)
T ss_pred             CCceeHHHHHHHHHHHhC
Confidence            678999999999999875

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.93  E-value=2.8e-24  Score=163.48  Aligned_cols=169  Identities=36%  Similarity=0.538  Sum_probs=123.8

Q ss_pred             hhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCC--CCCCccCCCCCCchh---hhcccCchHHHHHHHHHHHHHH
Q 030406            3 EPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNR--SPDDVVDESCWSDLE---FCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         3 ~~nv~~t~~ll~~~~~~~-~~~~i~~Ss~~~~~~~~~~--~~~~~~~E~~~~~~~---~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +.|+.++.+|+++|++.+ +++||++|| .++|+....  ....+++|+.+...+   .+..+.+.|+.||.++|++++.
T Consensus       111 ~~~~~g~~~ll~~~~~~~~~~~~v~~SS-~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~  189 (353)
T PLN02896        111 DPAIKGTLNVLKSCLKSKTVKRVVFTSS-ISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFK  189 (353)
T ss_pred             HHHHHHHHHHHHHHHhcCCccEEEEEec-hhhccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHH
Confidence            456799999999999875 899999999 578874321  111236776432111   0112446899999999999999


Q ss_pred             HHHhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCcccc----C----CCCcccccHHHHHHHHHHhhcCCCCCC
Q 030406           77 EAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY----A----NSVQAYVHVRDVALAHILVYETPSASG  148 (178)
Q Consensus        77 ~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~i~v~D~a~~~~~~~~~~~~~~  148 (178)
                      |+++++++++++||++||||+.....+..+..+.....|.....    +    .+.++|||++|+|++++.+++.+..++
T Consensus       190 ~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~~~  269 (353)
T PLN02896        190 YAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTKAEG  269 (353)
T ss_pred             HHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhCCCcCc
Confidence            99999999999999999999865433333433444334433211    1    124699999999999999998765566


Q ss_pred             cEEEecCccCHHHHHHHHHHhCCC
Q 030406          149 RYLCAESVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       149 ~~~~~~~~~s~~e~~~~i~~~~~~  172 (178)
                      .|++++.++|++|+++.+++.++.
T Consensus       270 ~~~~~~~~~s~~el~~~i~~~~~~  293 (353)
T PLN02896        270 RYICCVDSYDMSELINHLSKEYPC  293 (353)
T ss_pred             cEEecCCCCCHHHHHHHHHHhCCC
Confidence            888888899999999999999864

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.93  E-value=8.8e-25  Score=169.92  Aligned_cols=163  Identities=18%  Similarity=0.293  Sum_probs=126.1

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.+|.+|+++|++.++ +|||+|| ..+|+.....+   .+|+.|...+ +..+.+.|+.+|..+|+++..|.+++
T Consensus       207 ~~~Nv~gt~nLleaa~~~g~-r~V~~SS-~~VYg~~~~~p---~~E~~~~~~~-P~~~~s~Y~~SK~~aE~~~~~y~~~~  280 (442)
T PLN02206        207 IKTNVVGTLNMLGLAKRVGA-RFLLTST-SEVYGDPLQHP---QVETYWGNVN-PIGVRSCYDEGKRTAETLTMDYHRGA  280 (442)
T ss_pred             HHHHHHHHHHHHHHHHHhCC-EEEEECC-hHHhCCCCCCC---CCccccccCC-CCCccchHHHHHHHHHHHHHHHHHHh
Confidence            46899999999999999886 8999999 68897654433   6776543221 33557889999999999999998888


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHH-HHHHHHhCCcc-cc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecCc
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASII-HILKYLNGSAK-TY--ANSVQAYVHVRDVALAHILVYETPSASGRYLC-AESV  156 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~-~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~~  156 (178)
                      +++++++||+++||++........+. .+.+.+.+... .+  |++.++|+|++|+|+++..+++.+ ..+.||+ ++++
T Consensus       281 g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~-~~g~yNIgs~~~  359 (442)
T PLN02206        281 NVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE-HVGPFNLGNPGE  359 (442)
T ss_pred             CCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcC-CCceEEEcCCCc
Confidence            99999999999999975322222333 33445555543 23  456899999999999999998765 4568987 5688


Q ss_pred             cCHHHHHHHHHHhCC
Q 030406          157 LHRGEVVEILAKFFP  171 (178)
Q Consensus       157 ~s~~e~~~~i~~~~~  171 (178)
                      +|++|+++.+++.+.
T Consensus       360 ~sl~Elae~i~~~~g  374 (442)
T PLN02206        360 FTMLELAKVVQETID  374 (442)
T ss_pred             eeHHHHHHHHHHHhC
Confidence            999999999999873

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.93  E-value=1.1e-24  Score=169.63  Aligned_cols=163  Identities=18%  Similarity=0.229  Sum_probs=122.3

Q ss_pred             chhHHHHHHHHHHHHHhCCCC-EEEEeccccccccCCCCCCCCccCCCCC-----C-ch--hhhcccCchHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKVR-RVVFTSSIGAVYMDPNRSPDDVVDESCW-----S-DL--EFCKNTKNWYCYGKAVAEK   72 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~-~~i~~Ss~~~~~~~~~~~~~~~~~E~~~-----~-~~--~~~~~~~~~Y~~sK~~~E~   72 (178)
                      +++|+.||.+++++|++.+++ +|||+|| .++||.... +   ++|...     . +.  ..+..|.+.|+.+|.++|.
T Consensus       163 ~~~Nv~gt~nlleaa~~~gv~~~~V~~SS-~~vYG~~~~-~---~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~  237 (442)
T PLN02572        163 QHNNVIGTLNVLFAIKEFAPDCHLVKLGT-MGEYGTPNI-D---IEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSH  237 (442)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCccEEEEec-ceecCCCCC-C---CcccccccccccccccccCCCCCCCcchhHHHHHHH
Confidence            468999999999999999885 9999999 689985421 1   333210     0 00  0134678899999999999


Q ss_pred             HHHHHHHhcCCcEEEecCCceeCCCCCCCC---------------hhhHH-HHHHHHhCCcc-cc--CCCCcccccHHHH
Q 030406           73 AAWEEAVARGVDLVVVNPVLVLGPLLQSTV---------------NASII-HILKYLNGSAK-TY--ANSVQAYVHVRDV  133 (178)
Q Consensus        73 ~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~---------------~~~~~-~~~~~~~~~~~-~~--~~~~~~~i~v~D~  133 (178)
                      +++.|++++|++++++||+++|||+.....               ...+. .+.+...|+.. .+  |++.++|+||+|+
T Consensus       238 l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dv  317 (442)
T PLN02572        238 NIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDT  317 (442)
T ss_pred             HHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHH
Confidence            999999999999999999999999854310               11222 23344556543 33  5778999999999


Q ss_pred             HHHHHHhhcCCCC-C--CcEEEecCccCHHHHHHHHHHh
Q 030406          134 ALAHILVYETPSA-S--GRYLCAESVLHRGEVVEILAKF  169 (178)
Q Consensus       134 a~~~~~~~~~~~~-~--~~~~~~~~~~s~~e~~~~i~~~  169 (178)
                      +++++.+++.... +  ..||++++.+|++|+++.+++.
T Consensus       318 a~a~~~al~~~~~~g~~~i~Nigs~~~si~el~~~i~~~  356 (442)
T PLN02572        318 VRCIEIAIANPAKPGEFRVFNQFTEQFSVNELAKLVTKA  356 (442)
T ss_pred             HHHHHHHHhChhhcCceeEEEeCCCceeHHHHHHHHHHH
Confidence            9999999986533 2  2678877889999999999998

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.93  E-value=1.4e-24  Score=177.09  Aligned_cols=162  Identities=20%  Similarity=0.207  Sum_probs=127.3

Q ss_pred             chhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.+|.+|+++|++.+ +++|||+|| ..+|+.....+....+|++      +..|.+.|+.+|..+|++++.+.++
T Consensus       104 ~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS-~~vyg~~~~~~~~~~~E~~------~~~p~~~Y~~sK~~aE~~v~~~~~~  176 (668)
T PLN02260        104 TKNNIYGTHVLLEACKVTGQIRRFIHVST-DEVYGETDEDADVGNHEAS------QLLPTNPYSATKAGAEMLVMAYGRS  176 (668)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEEcc-hHHhCCCccccccCccccC------CCCCCCCcHHHHHHHHHHHHHHHHH
Confidence            4689999999999999987 899999999 6889865433211234554      3457889999999999999999888


Q ss_pred             cCCcEEEecCCceeCCCCCCCChhhHHHHH-HHHhCCcc-cc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEEe-cC
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTVNASIIHIL-KYLNGSAK-TY--ANSVQAYVHVRDVALAHILVYETPSASGRYLCA-ES  155 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~-~~~~~~~~-~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~  155 (178)
                      ++++++++||++|||++....  ..+..+. ....+... ..  |++.++|+|++|+++++..+++....+++||++ ++
T Consensus       177 ~~l~~vilR~~~VyGp~~~~~--~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~~~~vyni~~~~  254 (668)
T PLN02260        177 YGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEVGHVYNIGTKK  254 (668)
T ss_pred             cCCCEEEECcccccCcCCCcc--cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCCCCCEEEECCCC
Confidence            899999999999999986432  2333333 33444442 23  567899999999999999999877667799874 67


Q ss_pred             ccCHHHHHHHHHHhCCC
Q 030406          156 VLHRGEVVEILAKFFPE  172 (178)
Q Consensus       156 ~~s~~e~~~~i~~~~~~  172 (178)
                      .+|++|+++.+++.++.
T Consensus       255 ~~s~~el~~~i~~~~g~  271 (668)
T PLN02260        255 ERRVIDVAKDICKLFGL  271 (668)
T ss_pred             eeEHHHHHHHHHHHhCC
Confidence            89999999999998853

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.93  E-value=2e-24  Score=161.07  Aligned_cols=164  Identities=20%  Similarity=0.279  Sum_probs=124.3

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCc-hHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKN-WYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~   80 (178)
                      ++.|+.++.+|+++|++.+++++||+|| ..+|+.....+   ++|+++...  +..|.+ .|+.+|..+|++++.+.+.
T Consensus        74 ~~~n~~~~~~ll~~~~~~~~~~~i~~SS-~~vyg~~~~~~---~~E~~~~~~--~~~p~~~~Y~~sK~~~e~~~~~~~~~  147 (306)
T PLN02725         74 IRENLQIQTNVIDAAYRHGVKKLLFLGS-SCIYPKFAPQP---IPETALLTG--PPEPTNEWYAIAKIAGIKMCQAYRIQ  147 (306)
T ss_pred             HHHHhHHHHHHHHHHHHcCCCeEEEeCc-eeecCCCCCCC---CCHHHhccC--CCCCCcchHHHHHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999 68887544434   788764321  224444 5999999999999998888


Q ss_pred             cCCcEEEecCCceeCCCCCCC--ChhhHHHHH-----HHHhCCccc--c--CCCCcccccHHHHHHHHHHhhcCCCCCCc
Q 030406           81 RGVDLVVVNPVLVLGPLLQST--VNASIIHIL-----KYLNGSAKT--Y--ANSVQAYVHVRDVALAHILVYETPSASGR  149 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~--~~~~~~~~~-----~~~~~~~~~--~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~  149 (178)
                      .+++++++||+.+||++....  ....+..+.     ....+.+..  +  |++.++|+|++|++++++.+++.....+.
T Consensus       148 ~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~~~~~  227 (306)
T PLN02725        148 YGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYSGAEH  227 (306)
T ss_pred             hCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhccccCcc
Confidence            899999999999999974311  011222222     222344322  2  46688999999999999999987655567


Q ss_pred             EEE-ecCccCHHHHHHHHHHhCC
Q 030406          150 YLC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       150 ~~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                      ||+ +++++|+.|+++.+++.++
T Consensus       228 ~ni~~~~~~s~~e~~~~i~~~~~  250 (306)
T PLN02725        228 VNVGSGDEVTIKELAELVKEVVG  250 (306)
T ss_pred             eEeCCCCcccHHHHHHHHHHHhC
Confidence            887 4678999999999999885

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.92  E-value=5e-24  Score=173.39  Aligned_cols=166  Identities=18%  Similarity=0.244  Sum_probs=126.2

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhh-cccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFC-KNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~-~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.+|.+++++|++.+ ++|||+|| +++||.....+   ++|+.+.....+ ..|.+.|+.||..+|++++.++++
T Consensus       406 ~~~Nv~~t~~ll~a~~~~~-~~~V~~SS-~~vyg~~~~~~---~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~  480 (660)
T PRK08125        406 FELDFEENLKIIRYCVKYN-KRIIFPST-SEVYGMCTDKY---FDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEK  480 (660)
T ss_pred             HHhhHHHHHHHHHHHHhcC-CeEEEEcc-hhhcCCCCCCC---cCccccccccCCCCCCccchHHHHHHHHHHHHHHHHh
Confidence            5789999999999999988 89999999 68898643333   788764321112 135678999999999999999888


Q ss_pred             cCCcEEEecCCceeCCCCCCC------ChhhHH-HHHHHHhCCccc-c--CCCCcccccHHHHHHHHHHhhcCCC---CC
Q 030406           81 RGVDLVVVNPVLVLGPLLQST------VNASII-HILKYLNGSAKT-Y--ANSVQAYVHVRDVALAHILVYETPS---AS  147 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~------~~~~~~-~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~~~~~~~~~~~---~~  147 (178)
                      ++++++++||+++|||+....      ....+. .+.+...++... .  |++.++|+|++|++++++.+++++.   .+
T Consensus       481 ~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g  560 (660)
T PRK08125        481 EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDG  560 (660)
T ss_pred             cCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhccccccCC
Confidence            899999999999999975321      012233 334445455432 2  5678999999999999999998753   24


Q ss_pred             CcEEEec-C-ccCHHHHHHHHHHhCCC
Q 030406          148 GRYLCAE-S-VLHRGEVVEILAKFFPE  172 (178)
Q Consensus       148 ~~~~~~~-~-~~s~~e~~~~i~~~~~~  172 (178)
                      +.||+++ + .+|++|+++.+++.++.
T Consensus       561 ~iyni~~~~~~~s~~el~~~i~~~~g~  587 (660)
T PRK08125        561 QIINIGNPDNEASIRELAEMLLASFEK  587 (660)
T ss_pred             eEEEcCCCCCceeHHHHHHHHHHHhcc
Confidence            4898754 4 69999999999998753

>PLN02427 UDP-apiose/xylose synthase

Probab=99.92  E-value=1.1e-23  Score=162.05  Aligned_cols=165  Identities=16%  Similarity=0.264  Sum_probs=120.4

Q ss_pred             hhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCch---------h-------hhcccCchHHHH
Q 030406            3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDL---------E-------FCKNTKNWYCYG   66 (178)
Q Consensus         3 ~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~---------~-------~~~~~~~~Y~~s   66 (178)
                      ..|+.++.+++++|++.+ ++|||+|| .++||.....+   ++|+.+...         +       +...+.+.|+.+
T Consensus       111 ~~n~~gt~~ll~aa~~~~-~r~v~~SS-~~vYg~~~~~~---~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~s  185 (386)
T PLN02427        111 YSNFIDALPVVKYCSENN-KRLIHFST-CEVYGKTIGSF---LPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACA  185 (386)
T ss_pred             HHHHHHHHHHHHHHHhcC-CEEEEEee-eeeeCCCcCCC---CCcccccccccccccccccccccccCCCCccccchHHH
Confidence            579999999999999887 89999999 68897543222   333332110         0       011345689999


Q ss_pred             HHHHHHHHHHHHHhcCCcEEEecCCceeCCCCCC---------CChhhHHHHH-HHHhCCcc-cc--CCCCcccccHHHH
Q 030406           67 KAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQS---------TVNASIIHIL-KYLNGSAK-TY--ANSVQAYVHVRDV  133 (178)
Q Consensus        67 K~~~E~~~~~~~~~~~~~~~i~R~~~v~G~~~~~---------~~~~~~~~~~-~~~~~~~~-~~--~~~~~~~i~v~D~  133 (178)
                      |..+|++++.++++++++++++||++|||++...         .....+..+. ....+++. ..  |++.++|+|++|+
T Consensus       186 K~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dv  265 (386)
T PLN02427        186 KQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDA  265 (386)
T ss_pred             HHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHH
Confidence            9999999999888889999999999999997431         0112233233 34445442 23  4567899999999


Q ss_pred             HHHHHHhhcCCC--CCCcEEEec--CccCHHHHHHHHHHhCCC
Q 030406          134 ALAHILVYETPS--ASGRYLCAE--SVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       134 a~~~~~~~~~~~--~~~~~~~~~--~~~s~~e~~~~i~~~~~~  172 (178)
                      +++++.+++.+.  .++.||+++  +++|++|+++.+++.++.
T Consensus       266 a~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~  308 (386)
T PLN02427        266 IEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK  308 (386)
T ss_pred             HHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence            999999998763  244898864  489999999999998864

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.92  E-value=9.1e-24  Score=160.59  Aligned_cols=162  Identities=21%  Similarity=0.220  Sum_probs=124.8

Q ss_pred             CchhHHHHHHHHHHHHHhC---------CCCEEEEeccccccccCCCCCC-------CCccCCCCCCchhhhcccCchHH
Q 030406            1 MVEPAVIGTKNVIVAAAEA---------KVRRVVFTSSIGAVYMDPNRSP-------DDVVDESCWSDLEFCKNTKNWYC   64 (178)
Q Consensus         1 ~~~~nv~~t~~ll~~~~~~---------~~~~~i~~Ss~~~~~~~~~~~~-------~~~~~E~~~~~~~~~~~~~~~Y~   64 (178)
                      ++++|+.|+.+++++|++.         +++++||+|| .++|+......       ..+++|++      +..|.+.|+
T Consensus        96 ~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS-~~vyg~~~~~~~~~~~~~~~~~~E~~------~~~p~~~Y~  168 (352)
T PRK10084         96 FIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHIST-DEVYGDLPHPDEVENSEELPLFTETT------AYAPSSPYS  168 (352)
T ss_pred             hhhhhhHHHHHHHHHHHHhccccccccccceeEEEecc-hhhcCCCCccccccccccCCCccccC------CCCCCChhH
Confidence            3689999999999999874         4679999999 67887532100       01245654      456888999


Q ss_pred             HHHHHHHHHHHHHHHhcCCcEEEecCCceeCCCCCCCChhhHH-HHHHHHhCCc-ccc--CCCCcccccHHHHHHHHHHh
Q 030406           65 YGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASII-HILKYLNGSA-KTY--ANSVQAYVHVRDVALAHILV  140 (178)
Q Consensus        65 ~sK~~~E~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~-~~~~~~~~~~-~~~--~~~~~~~i~v~D~a~~~~~~  140 (178)
                      .+|..+|++++.++++++++++++|++++|||+....  ..+. .+.++..+.. +.+  |++.++|+|++|+++++..+
T Consensus       169 ~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~  246 (352)
T PRK10084        169 ASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE--KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKV  246 (352)
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCcc--chHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHH
Confidence            9999999999999888999999999999999985332  2333 3344454544 333  57799999999999999999


Q ss_pred             hcCCCCCCcEEE-ecCccCHHHHHHHHHHhCC
Q 030406          141 YETPSASGRYLC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       141 ~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                      ++.+..++.||+ +++.+|++|+++.+++.++
T Consensus       247 l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~  278 (352)
T PRK10084        247 VTEGKAGETYNIGGHNEKKNLDVVLTICDLLD  278 (352)
T ss_pred             HhcCCCCceEEeCCCCcCcHHHHHHHHHHHhc
Confidence            987655678987 4678999999999998875

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.92  E-value=1.4e-23  Score=156.98  Aligned_cols=163  Identities=27%  Similarity=0.317  Sum_probs=126.6

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.+|++++++|++.++++|||.||. ++++..  .+..+++|+.     .+..|.+.|+.+|+.+|+.++.+.+.+
T Consensus        89 ~~~nv~gt~~ll~aa~~~~~~~~v~~ss~-~~~~~~--~~~~~~~E~~-----~~~~p~~~Yg~sK~~~E~~~~~~~~~~  160 (314)
T COG0451          89 LDVNVDGTLNLLEAARAAGVKRFVFASSV-SVVYGD--PPPLPIDEDL-----GPPRPLNPYGVSKLAAEQLLRAYARLY  160 (314)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCeEEEeCCC-ceECCC--CCCCCccccc-----CCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            57899999999999999999999998884 555443  2222478873     144666799999999999999998888


Q ss_pred             CCcEEEecCCceeCCCCCCCChh-hHHH-HHHHHhCCc-ccc---CCCCcccccHHHHHHHHHHhhcCCCCCCcEEEec-
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNA-SIIH-ILKYLNGSA-KTY---ANSVQAYVHVRDVALAHILVYETPSASGRYLCAE-  154 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~-~~~~-~~~~~~~~~-~~~---~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~-  154 (178)
                      |++++++||+++||++....... .... +.....+.+ ...   +...++++|++|++++++.+++.+... .||+++ 
T Consensus       161 ~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~-~~ni~~~  239 (314)
T COG0451         161 GLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG-VFNIGSG  239 (314)
T ss_pred             CCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCCc-EEEeCCC
Confidence            99999999999999987664222 2222 334455554 333   355689999999999999999998777 888755 


Q ss_pred             C-ccCHHHHHHHHHHhCCCC
Q 030406          155 S-VLHRGEVVEILAKFFPEY  173 (178)
Q Consensus       155 ~-~~s~~e~~~~i~~~~~~~  173 (178)
                      + .++++|+++.+++.++..
T Consensus       240 ~~~~~~~e~~~~~~~~~~~~  259 (314)
T COG0451         240 TAEITVRELAEAVAEAVGSK  259 (314)
T ss_pred             CCcEEHHHHHHHHHHHhCCC
Confidence            3 799999999999988543

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.92  E-value=1.7e-23  Score=158.67  Aligned_cols=159  Identities=17%  Similarity=0.121  Sum_probs=124.4

Q ss_pred             chhHHHHHHHHHHHHHhCCCC---EEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKVR---RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~---~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.||.+++++|++.+++   +|||+|| .++||.....+   ++|+.      +..|.+.|+.||..+|.+++.++
T Consensus       102 ~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS-~~vyg~~~~~~---~~E~~------~~~p~~~Y~~sK~~~e~~~~~~~  171 (343)
T TIGR01472       102 ADVDGIGTLRLLEAVRTLGLIKSVKFYQAST-SELYGKVQEIP---QNETT------PFYPRSPYAAAKLYAHWITVNYR  171 (343)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcCeeEEEecc-HHhhCCCCCCC---CCCCC------CCCCCChhHHHHHHHHHHHHHHH
Confidence            367899999999999998763   8999999 68998654333   77776      44688999999999999999998


Q ss_pred             HhcCCcEEEecCCceeCCCCCCC-ChhhHHH-HHHHHhCCcc--cc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE
Q 030406           79 VARGVDLVVVNPVLVLGPLLQST-VNASIIH-ILKYLNGSAK--TY--ANSVQAYVHVRDVALAHILVYETPSASGRYLC  152 (178)
Q Consensus        79 ~~~~~~~~i~R~~~v~G~~~~~~-~~~~~~~-~~~~~~~~~~--~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~  152 (178)
                      +++++++++.|+.++|||+.... ....+.. +.+...+...  ..  |++.++|+|++|++++++.+++.+. .+.||+
T Consensus       172 ~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~~-~~~yni  250 (343)
T TIGR01472       172 EAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQDK-PDDYVI  250 (343)
T ss_pred             HHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcCC-CccEEe
Confidence            88899999999999999874332 1122222 2344445432  22  5789999999999999999998753 468987


Q ss_pred             -ecCccCHHHHHHHHHHhCC
Q 030406          153 -AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       153 -~~~~~s~~e~~~~i~~~~~  171 (178)
                       +++++|++|+++.+++.++
T Consensus       251 ~~g~~~s~~e~~~~i~~~~g  270 (343)
T TIGR01472       251 ATGETHSVREFVEVSFEYIG  270 (343)
T ss_pred             cCCCceeHHHHHHHHHHHcC
Confidence             5789999999999999885

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.91  E-value=9.7e-24  Score=151.82  Aligned_cols=142  Identities=32%  Similarity=0.452  Sum_probs=116.3

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      ++.|+.++++++++|++.+++++||+|| ..+|+.....+   ++|++      +..|.+.|+.+|..+|++++.+.+++
T Consensus        89 ~~~n~~~~~~ll~~~~~~~~~~~i~~sS-~~~y~~~~~~~---~~e~~------~~~~~~~Y~~~K~~~e~~~~~~~~~~  158 (236)
T PF01370_consen   89 IEANVQGTRNLLEAAREAGVKRFIFLSS-ASVYGDPDGEP---IDEDS------PINPLSPYGASKRAAEELLRDYAKKY  158 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSEEEEEEE-GGGGTSSSSSS---BETTS------GCCHSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccc-ccccccccccc---ccccc------cccccccccccccccccccccccccc
Confidence            5689999999999999999999999999 78998774444   88887      44788889999999999999999999


Q ss_pred             CCcEEEecCCceeCCCC-CCCChhhHH-HHHHHHhCCcc-c--cCCCCcccccHHHHHHHHHHhhcCCC-CCCcEEEe
Q 030406           82 GVDLVVVNPVLVLGPLL-QSTVNASII-HILKYLNGSAK-T--YANSVQAYVHVRDVALAHILVYETPS-ASGRYLCA  153 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~-~~~~~~~~~-~~~~~~~~~~~-~--~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~~~~  153 (178)
                      +++++++||+.+||+.. .......+. .+.++.++++. .  .+++.++|+|++|++++++.+++++. .++.||++
T Consensus       159 ~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~yNig  236 (236)
T PF01370_consen  159 GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIYNIG  236 (236)
T ss_dssp             TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEEEES
T ss_pred             ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            99999999999999981 111123344 44455566642 2  36789999999999999999999998 56699874

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.91  E-value=2.6e-23  Score=158.97  Aligned_cols=164  Identities=13%  Similarity=0.144  Sum_probs=123.2

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCC-CCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSP-DDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~-~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      ++.|+.++.+|+++|++.++++|||+|| .++|+...... ..+++|++.    .+..|.+.|+.+|..+|++++.+.++
T Consensus       110 ~~~N~~~t~nll~aa~~~~vk~~V~~SS-~~vYg~~~~~~~~~~~~E~~~----~p~~p~s~Yg~sK~~~E~~~~~~~~~  184 (370)
T PLN02695        110 MYNNTMISFNMLEAARINGVKRFFYASS-ACIYPEFKQLETNVSLKESDA----WPAEPQDAYGLEKLATEELCKHYTKD  184 (370)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeCc-hhhcCCccccCcCCCcCcccC----CCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            4579999999999999999999999999 68897543211 112555431    14468889999999999999999888


Q ss_pred             cCCcEEEecCCceeCCCCCCCC--hhhHHHH-HHHHhC-Cc-ccc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTV--NASIIHI-LKYLNG-SA-KTY--ANSVQAYVHVRDVALAHILVYETPSASGRYLC-  152 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~--~~~~~~~-~~~~~~-~~-~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-  152 (178)
                      +|++++++||+++|||+.....  ......+ .+++.+ .. ..+  |++.++|+|++|++++++.+++.+ ..+.||+ 
T Consensus       185 ~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~-~~~~~nv~  263 (370)
T PLN02695        185 FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSD-FREPVNIG  263 (370)
T ss_pred             hCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhcc-CCCceEec
Confidence            9999999999999999753211  1112222 233332 22 233  567899999999999999988765 4568887 


Q ss_pred             ecCccCHHHHHHHHHHhCC
Q 030406          153 AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       153 ~~~~~s~~e~~~~i~~~~~  171 (178)
                      +++.+|++|+++.+++..+
T Consensus       264 ~~~~~s~~el~~~i~~~~g  282 (370)
T PLN02695        264 SDEMVSMNEMAEIALSFEN  282 (370)
T ss_pred             CCCceeHHHHHHHHHHHhC
Confidence            4678999999999998765

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.91  E-value=3e-23  Score=157.61  Aligned_cols=161  Identities=18%  Similarity=0.150  Sum_probs=122.8

Q ss_pred             chhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.++.+++++|++.+ ++++|++|| .++|+.....  .+++|++      +..|.+.|+.+|..+|.+++.++++
T Consensus        99 ~~~N~~g~~~ll~a~~~~~~~~~iv~~SS-~~vyg~~~~~--~~~~e~~------~~~p~~~Y~~sK~~~e~~~~~~~~~  169 (349)
T TIGR02622        99 FETNVMGTVNLLEAIRAIGSVKAVVNVTS-DKCYRNDEWV--WGYRETD------PLGGHDPYSSSKACAELVIASYRSS  169 (349)
T ss_pred             HHHhHHHHHHHHHHHHhcCCCCEEEEEec-hhhhCCCCCC--CCCccCC------CCCCCCcchhHHHHHHHHHHHHHHH
Confidence            5789999999999999876 789999999 6888754321  1266765      3467889999999999999988765


Q ss_pred             c-------CCcEEEecCCceeCCCCCCCChhhHHHHHH-HHhCCcccc--CCCCcccccHHHHHHHHHHhhcCC-----C
Q 030406           81 R-------GVDLVVVNPVLVLGPLLQSTVNASIIHILK-YLNGSAKTY--ANSVQAYVHVRDVALAHILVYETP-----S  145 (178)
Q Consensus        81 ~-------~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~-----~  145 (178)
                      +       +++++++||+++|||+.... ...+..+.+ ...|.....  |++.++|+|++|++++++.+++..     .
T Consensus       170 ~~~~~~~~~i~~~~lR~~~vyGp~~~~~-~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~  248 (349)
T TIGR02622       170 FFGVANFHGIKIASARAGNVIGGGDWAE-DRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLSGYLLLAEKLFTGQAE  248 (349)
T ss_pred             hhcccccCCCcEEEEccCcccCCCcchh-hhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHHHHHHHHHHHhhcCcc
Confidence            4       89999999999999874322 123444444 444544333  578999999999999999887642     1


Q ss_pred             CCCcEEEec---CccCHHHHHHHHHHhCCC
Q 030406          146 ASGRYLCAE---SVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       146 ~~~~~~~~~---~~~s~~e~~~~i~~~~~~  172 (178)
                      .++.||++.   +++++.|+++.+.+.++.
T Consensus       249 ~~~~yni~s~~~~~~s~~~~~~~i~~~~~~  278 (349)
T TIGR02622       249 FAGAWNFGPRASDNARVVELVVDALEFWWG  278 (349)
T ss_pred             ccceeeeCCCcccCcCHHHHHHHHHHHhcC
Confidence            246899863   689999999999987754

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.91  E-value=1.1e-22  Score=150.51  Aligned_cols=154  Identities=18%  Similarity=0.179  Sum_probs=120.5

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.+. ++|++|| .++|+.....+   ++|++      +.+|.+.|+.+|..+|++++.+    
T Consensus        74 ~~~n~~~~~~l~~~~~~~~~-~~v~~Ss-~~vy~~~~~~~---~~E~~------~~~~~~~Y~~~K~~~E~~~~~~----  138 (287)
T TIGR01214        74 FAVNALAPQNLARAAARHGA-RLVHIST-DYVFDGEGKRP---YREDD------ATNPLNVYGQSKLAGEQAIRAA----  138 (287)
T ss_pred             HHHHHHHHHHHHHHHHHcCC-eEEEEee-eeeecCCCCCC---CCCCC------CCCCcchhhHHHHHHHHHHHHh----
Confidence            56899999999999998885 8999999 68886544334   78876      3467789999999999998865    


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHh-CCc-cccCCCCcccccHHHHHHHHHHhhcCC-CCCCcEEE-ecCcc
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLN-GSA-KTYANSVQAYVHVRDVALAHILVYETP-SASGRYLC-AESVL  157 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~i~v~D~a~~~~~~~~~~-~~~~~~~~-~~~~~  157 (178)
                      +++++++||+++||++...   .....+...+. +.. ...+++.++++|++|+++++..+++.+ ..++.||+ +++.+
T Consensus       139 ~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~  215 (287)
T TIGR01214       139 GPNALIVRTSWLYGGGGGR---NFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLARARGVYHLANSGQC  215 (287)
T ss_pred             CCCeEEEEeeecccCCCCC---CHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECCCCc
Confidence            6799999999999997432   12333333333 333 334677899999999999999999886 35678876 56789


Q ss_pred             CHHHHHHHHHHhCCCC
Q 030406          158 HRGEVVEILAKFFPEY  173 (178)
Q Consensus       158 s~~e~~~~i~~~~~~~  173 (178)
                      |++|+++.+++.++..
T Consensus       216 s~~e~~~~i~~~~~~~  231 (287)
T TIGR01214       216 SWYEFAQAIFEEAGAD  231 (287)
T ss_pred             CHHHHHHHHHHHhCcc
Confidence            9999999999998643

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.91  E-value=3.5e-23  Score=147.22  Aligned_cols=162  Identities=20%  Similarity=0.322  Sum_probs=134.4

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +.+|+.||.+++-.|++.+ +||++.|| +.+||++...|   ..|+.|.... +..|.+.|...|..+|.++..|.++.
T Consensus       115 IktN~igtln~lglakrv~-aR~l~aST-seVYgdp~~hp---q~e~ywg~vn-pigpr~cydegKr~aE~L~~~y~k~~  188 (350)
T KOG1429|consen  115 IKTNVIGTLNMLGLAKRVG-ARFLLAST-SEVYGDPLVHP---QVETYWGNVN-PIGPRSCYDEGKRVAETLCYAYHKQE  188 (350)
T ss_pred             eeecchhhHHHHHHHHHhC-ceEEEeec-ccccCCcccCC---CccccccccC-cCCchhhhhHHHHHHHHHHHHhhccc
Confidence            4679999999999999988 79999999 89999977666   6777766554 45889999999999999999999999


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHH-HHHHHHhCCcc-cc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecCc
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASII-HILKYLNGSAK-TY--ANSVQAYVHVRDVALAHILVYETPSASGRYLC-AESV  156 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~-~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~~  156 (178)
                      |+.+.|.|+++.|||+..-....... .+..++++.+. ++  |.|.++|.+++|++++++.+.+.+..+. +|+ +++.
T Consensus       189 giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~~p-vNiGnp~e  267 (350)
T KOG1429|consen  189 GIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYRGP-VNIGNPGE  267 (350)
T ss_pred             CcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCcCC-cccCCccc
Confidence            99999999999999986544334443 34455556553 33  5789999999999999999999986554 555 6789


Q ss_pred             cCHHHHHHHHHHhC
Q 030406          157 LHRGEVVEILAKFF  170 (178)
Q Consensus       157 ~s~~e~~~~i~~~~  170 (178)
                      +|+.|+++++.+..
T Consensus       268 ~Tm~elAemv~~~~  281 (350)
T KOG1429|consen  268 FTMLELAEMVKELI  281 (350)
T ss_pred             eeHHHHHHHHHHHc
Confidence            99999999999877

>PLN02240 UDP-glucose 4-epimerase

Probab=99.91  E-value=8.8e-23  Score=155.12  Aligned_cols=160  Identities=20%  Similarity=0.228  Sum_probs=122.3

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh-
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA-   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-   80 (178)
                      +++|+.++.+++++|++.++++||++|| .++|+.....+   ++|+.      +..+.+.|+.+|..+|++++.++.. 
T Consensus       105 ~~~n~~~~~~l~~~~~~~~~~~~v~~Ss-~~vyg~~~~~~---~~E~~------~~~~~~~Y~~sK~~~e~~~~~~~~~~  174 (352)
T PLN02240        105 YDNNLVGTINLLEVMAKHGCKKLVFSSS-ATVYGQPEEVP---CTEEF------PLSATNPYGRTKLFIEEICRDIHASD  174 (352)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEEcc-HHHhCCCCCCC---CCCCC------CCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            5789999999999999999999999999 68887554434   78886      4567889999999999999987654 


Q ss_pred             cCCcEEEecCCceeCCCCCC-------C-ChhhHHHHHHHHhCCcc---c--------cCCCCcccccHHHHHHHHHHhh
Q 030406           81 RGVDLVVVNPVLVLGPLLQS-------T-VNASIIHILKYLNGSAK---T--------YANSVQAYVHVRDVALAHILVY  141 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~-------~-~~~~~~~~~~~~~~~~~---~--------~~~~~~~~i~v~D~a~~~~~~~  141 (178)
                      .+++++++|++++||++...       . ....+..+.....+..+   .        .|.+.++|+|++|++++++.++
T Consensus       175 ~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~  254 (352)
T PLN02240        175 PEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAAL  254 (352)
T ss_pred             CCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHH
Confidence            57999999999999975321       0 11223334444444321   1        2467899999999999998887


Q ss_pred             cCC----CC-CCcEEE-ecCccCHHHHHHHHHHhCC
Q 030406          142 ETP----SA-SGRYLC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       142 ~~~----~~-~~~~~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                      +..    .. ++.||+ +++++|++|+++.+++.++
T Consensus       255 ~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g  290 (352)
T PLN02240        255 RKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASG  290 (352)
T ss_pred             hhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhC
Confidence            642    23 358986 6789999999999999885

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.90  E-value=1.2e-22  Score=151.93  Aligned_cols=160  Identities=21%  Similarity=0.226  Sum_probs=124.9

Q ss_pred             chhHHHHHHHHHHHHHhCCCC-EEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVR-RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~-~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.++.+++++|++.+.+ ++||+|| .++|+......  +++|++      +..|.+.|+.+|..+|.+++.++.+
T Consensus        97 ~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss-~~v~g~~~~~~--~~~e~~------~~~~~~~Y~~sK~~~e~~~~~~~~~  167 (317)
T TIGR01181        97 IETNVVGTYTLLEAVRKYWHEFRFHHIST-DEVYGDLEKGD--AFTETT------PLAPSSPYSASKAASDHLVRAYHRT  167 (317)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCceEEEeec-cceeCCCCCCC--CcCCCC------CCCCCCchHHHHHHHHHHHHHHHHH
Confidence            468999999999999987543 8999999 67887543321  267775      4467789999999999999998888


Q ss_pred             cCCcEEEecCCceeCCCCCCCChhhHHH-HHHHHhCCc-ccc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecC
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTVNASIIH-ILKYLNGSA-KTY--ANSVQAYVHVRDVALAHILVYETPSASGRYLC-AES  155 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~~~~~~~-~~~~~~~~~-~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~  155 (178)
                      .+++++++||+.+||+.....  ..+.. +.....+.. +.+  |++.++|+|++|+++++..+++....++.||+ +++
T Consensus       168 ~~~~~~i~R~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~  245 (317)
T TIGR01181       168 YGLPALITRCSNNYGPYQFPE--KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGRVGETYNIGGGN  245 (317)
T ss_pred             hCCCeEEEEeccccCCCCCcc--cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCCCCceEEeCCCC
Confidence            899999999999999875432  23333 334444443 333  45789999999999999999987655668987 667


Q ss_pred             ccCHHHHHHHHHHhCCC
Q 030406          156 VLHRGEVVEILAKFFPE  172 (178)
Q Consensus       156 ~~s~~e~~~~i~~~~~~  172 (178)
                      +++++|+++.+++.++.
T Consensus       246 ~~s~~~~~~~i~~~~~~  262 (317)
T TIGR01181       246 ERTNLEVVETILELLGK  262 (317)
T ss_pred             ceeHHHHHHHHHHHhCC
Confidence            89999999999999864

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.90  E-value=2.1e-22  Score=151.44  Aligned_cols=163  Identities=33%  Similarity=0.418  Sum_probs=126.1

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCC-CCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDP-NRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~-~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.++.+++++|++.+++++|++|| .++|+.. ...+   ++|+.+..   +..+.+.|+.+|..+|++++++..+
T Consensus        86 ~~~n~~~~~~l~~~~~~~~~~~~v~~SS-~~~~~~~~~~~~---~~e~~~~~---~~~~~~~Y~~sK~~~e~~~~~~~~~  158 (328)
T TIGR03466        86 YAANVEGTRNLLRAALEAGVERVVYTSS-VATLGVRGDGTP---ADETTPSS---LDDMIGHYKRSKFLAEQAALEMAAE  158 (328)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCeEEEEec-hhhcCcCCCCCC---cCccCCCC---cccccChHHHHHHHHHHHHHHHHHh
Confidence            5689999999999999999999999999 5777642 2223   67775321   1123568999999999999999888


Q ss_pred             cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEEecCccCHH
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRG  160 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~  160 (178)
                      .+++++++||+.+||++..... .....+...+.+..+...+...+|+|++|++++++.+++.+..+..|+++++++|++
T Consensus       159 ~~~~~~ilR~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~~~~s~~  237 (328)
T TIGR03466       159 KGLPVVIVNPSTPIGPRDIKPT-PTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERGRIGERYILGGENLTLK  237 (328)
T ss_pred             cCCCEEEEeCCccCCCCCCCCC-cHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCCCCCceEEecCCCcCHH
Confidence            8999999999999999754321 112233444555545555666899999999999999998865555788888899999


Q ss_pred             HHHHHHHHhCCC
Q 030406          161 EVVEILAKFFPE  172 (178)
Q Consensus       161 e~~~~i~~~~~~  172 (178)
                      |+++.+++.++.
T Consensus       238 e~~~~i~~~~g~  249 (328)
T TIGR03466       238 QILDKLAEITGR  249 (328)
T ss_pred             HHHHHHHHHhCC
Confidence            999999998753

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.90  E-value=1.8e-22  Score=152.71  Aligned_cols=161  Identities=23%  Similarity=0.222  Sum_probs=121.7

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++||++|| .++|+.....+   ++|+++.     ..|.+.|+.+|..+|+++++++++.
T Consensus        97 ~~~n~~~~~~l~~~~~~~~~~~~v~~Ss-~~~yg~~~~~~---~~E~~~~-----~~p~~~Y~~sK~~~E~~~~~~~~~~  167 (338)
T PRK10675         97 YDNNVNGTLRLISAMRAANVKNLIFSSS-ATVYGDQPKIP---YVESFPT-----GTPQSPYGKSKLMVEQILTDLQKAQ  167 (338)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEecc-HHhhCCCCCCc---cccccCC-----CCCCChhHHHHHHHHHHHHHHHHhc
Confidence            5689999999999999999999999999 68887544333   7887631     1567899999999999999987654


Q ss_pred             -CCcEEEecCCceeCCCCCCC--------ChhhHHHHHHHHhCCcc---c--------cCCCCcccccHHHHHHHHHHhh
Q 030406           82 -GVDLVVVNPVLVLGPLLQST--------VNASIIHILKYLNGSAK---T--------YANSVQAYVHVRDVALAHILVY  141 (178)
Q Consensus        82 -~~~~~i~R~~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~---~--------~~~~~~~~i~v~D~a~~~~~~~  141 (178)
                       +++++++|++++||+.....        ....+..+.+...+...   .        .|.+.++|+|++|+|++++.++
T Consensus       168 ~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~  247 (338)
T PRK10675        168 PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAM  247 (338)
T ss_pred             CCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHH
Confidence             79999999999999753211        11223444445444321   1        2456799999999999999998


Q ss_pred             cCC--CC-CCcEEE-ecCccCHHHHHHHHHHhCC
Q 030406          142 ETP--SA-SGRYLC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       142 ~~~--~~-~~~~~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                      +..  .. ++.||+ +++.+|++|+++.+.+.++
T Consensus       248 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g  281 (338)
T PRK10675        248 EKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACG  281 (338)
T ss_pred             HhhhccCCCceEEecCCCceeHHHHHHHHHHHhC
Confidence            752  22 358987 5778999999999999885

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.90  E-value=2.3e-22  Score=152.26  Aligned_cols=158  Identities=14%  Similarity=0.093  Sum_probs=124.0

Q ss_pred             chhHHHHHHHHHHHHHhCCCC-----EEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKVR-----RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~-----~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.||.+++++|++.+++     +|||+|| +++||.... +   ++|+.      +..|.+.|+.||.++|.+++.
T Consensus       107 ~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss-~~vyg~~~~-~---~~E~~------~~~p~~~Y~~sK~~~e~~~~~  175 (340)
T PLN02653        107 ADVVATGALRLLEAVRLHGQETGRQIKYYQAGS-SEMYGSTPP-P---QSETT------PFHPRSPYAVAKVAAHWYTVN  175 (340)
T ss_pred             HHHHHHHHHHHHHHHHHhccccccceeEEEecc-HHHhCCCCC-C---CCCCC------CCCCCChhHHHHHHHHHHHHH
Confidence            468999999999999998765     8999999 689986543 3   77876      456888999999999999999


Q ss_pred             HHHhcCCcEEEecCCceeCCCCCCCC-hhhHHHHH-HHHhCCcc-cc---CCCCcccccHHHHHHHHHHhhcCCCCCCcE
Q 030406           77 EAVARGVDLVVVNPVLVLGPLLQSTV-NASIIHIL-KYLNGSAK-TY---ANSVQAYVHVRDVALAHILVYETPSASGRY  150 (178)
Q Consensus        77 ~~~~~~~~~~i~R~~~v~G~~~~~~~-~~~~~~~~-~~~~~~~~-~~---~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~  150 (178)
                      ++.+++++++..|+.++|||+..... ...+..+. +...+... .+   |++.++|+|++|+|++++.+++... ++.|
T Consensus       176 ~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~-~~~y  254 (340)
T PLN02653        176 YREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQEK-PDDY  254 (340)
T ss_pred             HHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcCC-CCcE
Confidence            99889999999999999998744321 11222222 33344432 22   4678999999999999999998753 4688


Q ss_pred             EE-ecCccCHHHHHHHHHHhCC
Q 030406          151 LC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       151 ~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                      |+ +++++|++|+++.+.+.++
T Consensus       255 ni~~g~~~s~~e~~~~i~~~~g  276 (340)
T PLN02653        255 VVATEESHTVEEFLEEAFGYVG  276 (340)
T ss_pred             EecCCCceeHHHHHHHHHHHcC
Confidence            86 5788999999999999875

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.90  E-value=2.1e-22  Score=149.98  Aligned_cols=149  Identities=17%  Similarity=0.109  Sum_probs=113.8

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+|+++|++.++ ++||+|| ..+|+.....|   ++|++      +..|.+.|+.+|+.+|++++.+.   
T Consensus        78 ~~~N~~~~~~l~~aa~~~g~-~~v~~Ss-~~Vy~~~~~~p---~~E~~------~~~P~~~Yg~sK~~~E~~~~~~~---  143 (299)
T PRK09987         78 QLLNATSVEAIAKAANEVGA-WVVHYST-DYVFPGTGDIP---WQETD------ATAPLNVYGETKLAGEKALQEHC---  143 (299)
T ss_pred             HHHHHHHHHHHHHHHHHcCC-eEEEEcc-ceEECCCCCCC---cCCCC------CCCCCCHHHHHHHHHHHHHHHhC---
Confidence            46899999999999999986 7999999 68897654444   88886      45788999999999999998753   


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHh-CCc-cccC----CCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ec
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLN-GSA-KTYA----NSVQAYVHVRDVALAHILVYETPSASGRYLC-AE  154 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~-~~~-~~~~----~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~  154 (178)
                       .+.+|+|++++|||+...    .+..+.+.+. ++. ..++    ...+.+.+++|+++++..+++.+...++||+ ++
T Consensus       144 -~~~~ilR~~~vyGp~~~~----~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~~giyni~~~  218 (299)
T PRK09987        144 -AKHLIFRTSWVYAGKGNN----FAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAS  218 (299)
T ss_pred             -CCEEEEecceecCCCCCC----HHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCCCCeEEeeCC
Confidence             367999999999986432    3344444443 433 2333    3445667788889998888876555579987 56


Q ss_pred             CccCHHHHHHHHHHh
Q 030406          155 SVLHRGEVVEILAKF  169 (178)
Q Consensus       155 ~~~s~~e~~~~i~~~  169 (178)
                      +.+|+.|+++.+.+.
T Consensus       219 ~~~s~~e~~~~i~~~  233 (299)
T PRK09987        219 GTTTWHDYAALVFEE  233 (299)
T ss_pred             CCccHHHHHHHHHHH
Confidence            789999999998775

>PLN02996 fatty acyl-CoA reductase

Probab=99.89  E-value=3.3e-22  Score=157.44  Aligned_cols=172  Identities=17%  Similarity=0.171  Sum_probs=120.2

Q ss_pred             chhHHHHHHHHHHHHHhC-CCCEEEEeccccccccCCCCC-CCCccCC-CCC--------C------------------c
Q 030406            2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAVYMDPNRS-PDDVVDE-SCW--------S------------------D   52 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-~~~~~i~~Ss~~~~~~~~~~~-~~~~~~E-~~~--------~------------------~   52 (178)
                      +++|+.||.+|+++|++. +++++||+|| +++||..... +..++++ .++        .                  +
T Consensus       133 ~~~Nv~gt~~ll~~a~~~~~~k~~V~vST-~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (491)
T PLN02996        133 LGINTLGALNVLNFAKKCVKVKMLLHVST-AYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDAS  211 (491)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEee-eEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCC
Confidence            478999999999999986 7899999999 6888754311 0011111 000        0                  0


Q ss_pred             h------------h--hhcccCchHHHHHHHHHHHHHHHHHhcCCcEEEecCCceeCCCCCCCCh------hhHHHHHHH
Q 030406           53 L------------E--FCKNTKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVN------ASIIHILKY  112 (178)
Q Consensus        53 ~------------~--~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~------~~~~~~~~~  112 (178)
                      .            .  ....+.++|+.||.++|+++.++..  +++++++||++|+|+...+...      .....+...
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~~~--~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~  289 (491)
T PLN02996        212 EEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFKE--NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGY  289 (491)
T ss_pred             HHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHhcC--CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHh
Confidence            0            0  0123557899999999999988753  8999999999999987544211      111223334


Q ss_pred             HhCCccc---cCCCCcccccHHHHHHHHHHhhcCC--C--CCCcEEEe-c--CccCHHHHHHHHHHhCCCCCCC
Q 030406          113 LNGSAKT---YANSVQAYVHVRDVALAHILVYETP--S--ASGRYLCA-E--SVLHRGEVVEILAKFFPEYPIP  176 (178)
Q Consensus       113 ~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~~~--~--~~~~~~~~-~--~~~s~~e~~~~i~~~~~~~~~p  176 (178)
                      .+|....   .|++.+|++||+|++++++.++...  .  .+.+||++ +  .++|+.|+++.+.+.+.+.|+.
T Consensus       290 ~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~~  363 (491)
T PLN02996        290 GKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPWI  363 (491)
T ss_pred             ccceEeEEecCCCeecceecccHHHHHHHHHHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCCc
Confidence            4455532   2577999999999999999998753  1  23489874 5  5899999999999988777764

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.89  E-value=6.9e-22  Score=147.94  Aligned_cols=158  Identities=18%  Similarity=0.213  Sum_probs=119.5

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH--
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV--   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--   79 (178)
                      +++|+.++.+++++|++.++ ++||+|| .++|+.... +   ++|+++     +..|.+.|+.+|..+|.+++++..  
T Consensus        88 ~~~n~~~~~~ll~~~~~~~~-~~v~~SS-~~vy~~~~~-~---~~e~~~-----~~~p~~~Y~~sK~~~e~~~~~~~~~~  156 (314)
T TIGR02197        88 MENNYQYSKRLLDWCAEKGI-PFIYASS-AATYGDGEA-G---FREGRE-----LERPLNVYGYSKFLFDQYVRRRVLPE  156 (314)
T ss_pred             HHHHHHHHHHHHHHHHHhCC-cEEEEcc-HHhcCCCCC-C---cccccC-----cCCCCCHHHHHHHHHHHHHHHHhHhh
Confidence            47899999999999999886 7999999 688875432 2   566542     225778999999999999987543  


Q ss_pred             hcCCcEEEecCCceeCCCCCCC--ChhhHHH-HHHHHhCCccc---------cCCCCcccccHHHHHHHHHHhhcCCCCC
Q 030406           80 ARGVDLVVVNPVLVLGPLLQST--VNASIIH-ILKYLNGSAKT---------YANSVQAYVHVRDVALAHILVYETPSAS  147 (178)
Q Consensus        80 ~~~~~~~i~R~~~v~G~~~~~~--~~~~~~~-~~~~~~~~~~~---------~~~~~~~~i~v~D~a~~~~~~~~~~~~~  147 (178)
                      ..+++++++|++++||++....  ....+.. +.....+..+.         .|++.++|+|++|+++++..++.. ..+
T Consensus       157 ~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~-~~~  235 (314)
T TIGR02197       157 ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN-GVS  235 (314)
T ss_pred             ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc-ccC
Confidence            3367999999999999975421  1122322 33444444321         245678999999999999999988 456


Q ss_pred             CcEEE-ecCccCHHHHHHHHHHhCC
Q 030406          148 GRYLC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       148 ~~~~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                      +.||+ +++++|++|+++.+++.++
T Consensus       236 ~~yni~~~~~~s~~e~~~~i~~~~g  260 (314)
T TIGR02197       236 GIFNLGTGRARSFNDLADAVFKALG  260 (314)
T ss_pred             ceEEcCCCCCccHHHHHHHHHHHhC
Confidence            69987 5679999999999999875

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.88  E-value=3.3e-21  Score=144.83  Aligned_cols=161  Identities=25%  Similarity=0.287  Sum_probs=122.7

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh-
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA-   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-   80 (178)
                      ++.|+.++.+++++|.+.+++++|++|| .++|+.....+   ++|++      +..|.+.|+.+|..+|+++++++++ 
T Consensus        94 ~~~n~~~~~~l~~~~~~~~~~~~v~~ss-~~~~g~~~~~~---~~e~~------~~~~~~~y~~sK~~~e~~~~~~~~~~  163 (328)
T TIGR01179        94 YRNNVVNTLNLLEAMQQTGVKKFIFSSS-AAVYGEPSSIP---ISEDS------PLGPINPYGRSKLMSERILRDLSKAD  163 (328)
T ss_pred             hhhhHHHHHHHHHHHHhcCCCEEEEecc-hhhcCCCCCCC---ccccC------CCCCCCchHHHHHHHHHHHHHHHHhc
Confidence            5689999999999999999999999999 57786543333   77876      4457789999999999999998776 


Q ss_pred             cCCcEEEecCCceeCCCCCCC-------ChhhHHHHHHHHhCC-c--cc--------cCCCCcccccHHHHHHHHHHhhc
Q 030406           81 RGVDLVVVNPVLVLGPLLQST-------VNASIIHILKYLNGS-A--KT--------YANSVQAYVHVRDVALAHILVYE  142 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~-------~~~~~~~~~~~~~~~-~--~~--------~~~~~~~~i~v~D~a~~~~~~~~  142 (178)
                      .+++++++||+.+||+.....       ....+..+.....+. .  ..        .|++.++|||++|+++++..+++
T Consensus       164 ~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~  243 (328)
T TIGR01179       164 PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALE  243 (328)
T ss_pred             cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHHHh
Confidence            799999999999999863321       112333343333321 1  11        23567899999999999999987


Q ss_pred             CC---CCCCcEEE-ecCccCHHHHHHHHHHhCCC
Q 030406          143 TP---SASGRYLC-AESVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       143 ~~---~~~~~~~~-~~~~~s~~e~~~~i~~~~~~  172 (178)
                      ..   ..++.||+ +++++|++|+++.+++.++.
T Consensus       244 ~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~  277 (328)
T TIGR01179       244 YLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGV  277 (328)
T ss_pred             hhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCC
Confidence            52   23458987 66789999999999999853

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.87  E-value=6.4e-21  Score=137.90  Aligned_cols=151  Identities=19%  Similarity=0.187  Sum_probs=125.4

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      |.+|..|+.|+.++|++.|+ ++||+|| ..||+.....+   +.|++      +.+|.+.||.||+++|..++++    
T Consensus        74 ~~vNa~~~~~lA~aa~~~ga-~lVhiST-DyVFDG~~~~~---Y~E~D------~~~P~nvYG~sKl~GE~~v~~~----  138 (281)
T COG1091          74 FAVNATGAENLARAAAEVGA-RLVHIST-DYVFDGEKGGP---YKETD------TPNPLNVYGRSKLAGEEAVRAA----  138 (281)
T ss_pred             HHhHHHHHHHHHHHHHHhCC-eEEEeec-ceEecCCCCCC---CCCCC------CCCChhhhhHHHHHHHHHHHHh----
Confidence            67999999999999999997 5999999 67776554444   88988      6789999999999999999875    


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCcc--ccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEEec-CccC
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK--TYANSVQAYVHVRDVALAHILVYETPSASGRYLCAE-SVLH  158 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~-~~~s  158 (178)
                      +-..+|+|.+++||....    .+...+++..+....  ..-++..+.+++.|+|+++..++......++|++++ +..|
T Consensus       139 ~~~~~I~Rtswv~g~~g~----nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~~~~yH~~~~g~~S  214 (281)
T COG1091         139 GPRHLILRTSWVYGEYGN----NFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKEGGVYHLVNSGECS  214 (281)
T ss_pred             CCCEEEEEeeeeecCCCC----CHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccccCcEEEEeCCCccc
Confidence            457899999999998752    356666666655543  346889999999999999999999988888998754 5579


Q ss_pred             HHHHHHHHHHhCC
Q 030406          159 RGEVVEILAKFFP  171 (178)
Q Consensus       159 ~~e~~~~i~~~~~  171 (178)
                      |-|+++.+.+.+.
T Consensus       215 wydfa~~I~~~~~  227 (281)
T COG1091         215 WYEFAKAIFEEAG  227 (281)
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999999874

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.87  E-value=1.4e-21  Score=144.63  Aligned_cols=151  Identities=23%  Similarity=0.236  Sum_probs=111.9

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+|.++|.+.++ ++||+|| ..||+.....|   ++|++      +.+|.+.||.+|+.+|+.+++..   
T Consensus        75 ~~iN~~~~~~la~~~~~~~~-~li~~ST-d~VFdG~~~~~---y~E~d------~~~P~~~YG~~K~~~E~~v~~~~---  140 (286)
T PF04321_consen   75 YAINVDATKNLAEACKERGA-RLIHIST-DYVFDGDKGGP---YTEDD------PPNPLNVYGRSKLEGEQAVRAAC---  140 (286)
T ss_dssp             HHHHTHHHHHHHHHHHHCT--EEEEEEE-GGGS-SSTSSS---B-TTS----------SSHHHHHHHHHHHHHHHH----
T ss_pred             HHHhhHHHHHHHHHHHHcCC-cEEEeec-cEEEcCCcccc---cccCC------CCCCCCHHHHHHHHHHHHHHHhc---
Confidence            57899999999999999986 7999999 68886554444   88987      56899999999999999998742   


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCc--cccCCCCcccccHHHHHHHHHHhhcCCCC----CCcEEE-ec
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA--KTYANSVQAYVHVRDVALAHILVYETPSA----SGRYLC-AE  154 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~v~D~a~~~~~~~~~~~~----~~~~~~-~~  154 (178)
                       -+.+|+|++++||+...    ..+..+.+.+....  ....++.++.+|++|+|+++..++++...    .|+|++ ++
T Consensus       141 -~~~~IlR~~~~~g~~~~----~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~  215 (286)
T PF04321_consen  141 -PNALILRTSWVYGPSGR----NFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGP  215 (286)
T ss_dssp             -SSEEEEEE-SEESSSSS----SHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---B
T ss_pred             -CCEEEEecceecccCCC----chhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecC
Confidence             38999999999999322    35555555554444  33467889999999999999999988643    679985 67


Q ss_pred             CccCHHHHHHHHHHhCC
Q 030406          155 SVLHRGEVVEILAKFFP  171 (178)
Q Consensus       155 ~~~s~~e~~~~i~~~~~  171 (178)
                      +.+|+.|+++.+++.++
T Consensus       216 ~~~S~~e~~~~i~~~~~  232 (286)
T PF04321_consen  216 ERVSRYEFAEAIAKILG  232 (286)
T ss_dssp             S-EEHHHHHHHHHHHHT
T ss_pred             cccCHHHHHHHHHHHhC
Confidence            88999999999999874

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.86  E-value=2e-20  Score=138.66  Aligned_cols=157  Identities=18%  Similarity=0.188  Sum_probs=113.6

Q ss_pred             chhHHHHHHHHHHHHHhCCCC--EEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKVR--RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~--~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.+++++|++.+++  ++|++|| ..+|+.....+   ++|+.      +..+.+.|+..+...|..+..+ +
T Consensus        83 ~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~-~~~yg~~~~~~---~~E~~------~~~~~~~~~~~~~~~e~~~~~~-~  151 (292)
T TIGR01777        83 RDSRIDTTRALVEAIAAAEQKPKVFISASA-VGYYGTSEDRV---FTEED------SPAGDDFLAELCRDWEEAAQAA-E  151 (292)
T ss_pred             HhcccHHHHHHHHHHHhcCCCceEEEEeee-EEEeCCCCCCC---cCccc------CCCCCChHHHHHHHHHHHhhhc-h
Confidence            467999999999999999874  4565665 46777544333   77775      2345556777777778776653 4


Q ss_pred             hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecCccC
Q 030406           80 ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLC-AESVLH  158 (178)
Q Consensus        80 ~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~~~s  158 (178)
                      +.+++++++||+++||+.... . ..+........+.....+++.++|+|++|+++++..+++.+...+.|++ +++.+|
T Consensus       152 ~~~~~~~ilR~~~v~G~~~~~-~-~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~~g~~~~~~~~~~s  229 (292)
T TIGR01777       152 DLGTRVVLLRTGIVLGPKGGA-L-AKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASISGPVNATAPEPVR  229 (292)
T ss_pred             hcCCceEEEeeeeEECCCcch-h-HHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCcccCCceEecCCCccC
Confidence            568999999999999986321 1 1111112222223333467889999999999999999998766778986 568899


Q ss_pred             HHHHHHHHHHhCC
Q 030406          159 RGEVVEILAKFFP  171 (178)
Q Consensus       159 ~~e~~~~i~~~~~  171 (178)
                      ++|+++.+++.++
T Consensus       230 ~~di~~~i~~~~g  242 (292)
T TIGR01777       230 NKEFAKALARALH  242 (292)
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999999885

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.84  E-value=3.1e-20  Score=138.71  Aligned_cols=159  Identities=26%  Similarity=0.259  Sum_probs=115.6

Q ss_pred             CchhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         1 ~~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      ++++||.||++++++|++.+++++||+||...+++... ...  -+|+.+.    |....+.|+.||..+|+++.+....
T Consensus        98 ~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~-~~n--~~E~~p~----p~~~~d~Y~~sKa~aE~~Vl~an~~  170 (361)
T KOG1430|consen   98 AMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEP-IIN--GDESLPY----PLKHIDPYGESKALAEKLVLEANGS  170 (361)
T ss_pred             heeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCee-ccc--CCCCCCC----ccccccccchHHHHHHHHHHHhcCC
Confidence            36899999999999999999999999999655554333 221  3555422    3456679999999999999997766


Q ss_pred             cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCcc----ccCCCCcccccHHHHHHHHHHhhcC-----CCCCC-cE
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK----TYANSVQAYVHVRDVALAHILVYET-----PSASG-RY  150 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~v~D~a~~~~~~~~~-----~~~~~-~~  150 (178)
                      .++.++++||..||||+....    +..+..+++....    ..++...++++++.++.+.+.+...     +...| .|
T Consensus       171 ~~l~T~aLR~~~IYGpgd~~~----~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~y  246 (361)
T KOG1430|consen  171 DDLYTCALRPPGIYGPGDKRL----LPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPSVNGQFY  246 (361)
T ss_pred             CCeeEEEEccccccCCCCccc----cHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCccCceEE
Confidence            679999999999999996653    3333333333332    2246788999999999888776532     34455 66


Q ss_pred             EE-ecCccCHHHHHHHHHHhC
Q 030406          151 LC-AESVLHRGEVVEILAKFF  170 (178)
Q Consensus       151 ~~-~~~~~s~~e~~~~i~~~~  170 (178)
                      ++ .++++...++...+.+.+
T Consensus       247 fI~d~~p~~~~~~~~~l~~~l  267 (361)
T KOG1430|consen  247 FITDDTPVRFFDFLSPLVKAL  267 (361)
T ss_pred             EEeCCCcchhhHHHHHHHHhc
Confidence            55 677887777777777777

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.83  E-value=4.3e-20  Score=134.08  Aligned_cols=160  Identities=23%  Similarity=0.247  Sum_probs=126.2

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +..|+.||.+||++|++++++.+||.|| +.+||.+...|   ++|+.+.+     .|.++|+.+|...|.++..+....
T Consensus       101 ~~nNi~gtlnlLe~~~~~~~~~~V~sss-atvYG~p~~ip---~te~~~t~-----~p~~pyg~tK~~iE~i~~d~~~~~  171 (343)
T KOG1371|consen  101 YHNNIAGTLNLLEVMKAHNVKALVFSSS-ATVYGLPTKVP---ITEEDPTD-----QPTNPYGKTKKAIEEIIHDYNKAY  171 (343)
T ss_pred             eehhhhhHHHHHHHHHHcCCceEEEecc-eeeecCcceee---ccCcCCCC-----CCCCcchhhhHHHHHHHHhhhccc
Confidence            5689999999999999999999999999 79999988877   99997322     389999999999999999999888


Q ss_pred             CCcEEEecCCceeCCCCCCC--------ChhhHHHHHHHHhCCccc-----------cCCCCcccccHHHHHHHHHHhhc
Q 030406           82 GVDLVVVNPVLVLGPLLQST--------VNASIIHILKYLNGSAKT-----------YANSVQAYVHVRDVALAHILVYE  142 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~-----------~~~~~~~~i~v~D~a~~~~~~~~  142 (178)
                      ++.++.+|.++++|....+.        .+...+.+.....+..+.           .|+..++++|+-|+|+....++.
T Consensus       172 ~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v~Dla~~h~~al~  251 (343)
T KOG1371|consen  172 GWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHVLDLADGHVAALG  251 (343)
T ss_pred             cceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeecceeeEehHHHHHHHhh
Confidence            99999999999999432211        111222222333333321           25789999999999999999998


Q ss_pred             CCCC---CCcEEE-ecCccCHHHHHHHHHHhC
Q 030406          143 TPSA---SGRYLC-AESVLHRGEVVEILAKFF  170 (178)
Q Consensus       143 ~~~~---~~~~~~-~~~~~s~~e~~~~i~~~~  170 (178)
                      ....   -++||. .+...++.+++..+++..
T Consensus       252 k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~  283 (343)
T KOG1371|consen  252 KLRGAAEFGVYNLGTGKGSSVLELVTAFEKAL  283 (343)
T ss_pred             ccccchheeeEeecCCCCccHHHHHHHHHHHh
Confidence            7644   238886 566788999999999987

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.83  E-value=1.7e-19  Score=135.84  Aligned_cols=141  Identities=18%  Similarity=0.167  Sum_probs=109.5

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH---
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA---   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~---   78 (178)
                      +++|+.|+.+++++|++.++++||++||. .                       +..|.+.|+.+|..+|++++.+.   
T Consensus        98 ~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~-~-----------------------~~~p~~~Y~~sK~~~E~l~~~~~~~~  153 (324)
T TIGR03589        98 IRTNINGAQNVIDAAIDNGVKRVVALSTD-K-----------------------AANPINLYGATKLASDKLFVAANNIS  153 (324)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEEeCC-C-----------------------CCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence            57899999999999999999999999993 2                       11355789999999999987643   


Q ss_pred             HhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHH-hCC-c-ccc-CCCCcccccHHHHHHHHHHhhcCCCCCCcEEEec
Q 030406           79 VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYL-NGS-A-KTY-ANSVQAYVHVRDVALAHILVYETPSASGRYLCAE  154 (178)
Q Consensus        79 ~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~-~~~-~-~~~-~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~  154 (178)
                      ...|++++++||+++||++..     .+..+.... .+. . +.. +++.++|+|++|++++++.+++....+..|+.++
T Consensus       154 ~~~gi~~~~lR~g~v~G~~~~-----~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~~~~~~~~~~~  228 (324)
T TIGR03589       154 GSKGTRFSVVRYGNVVGSRGS-----VVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERMLGGEIFVPKI  228 (324)
T ss_pred             cccCcEEEEEeecceeCCCCC-----cHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhCCCCCEEccCC
Confidence            457999999999999998631     333344433 343 2 222 5678899999999999999998753344676566


Q ss_pred             CccCHHHHHHHHHHhCC
Q 030406          155 SVLHRGEVVEILAKFFP  171 (178)
Q Consensus       155 ~~~s~~e~~~~i~~~~~  171 (178)
                      ..+++.|+++.+.+.++
T Consensus       229 ~~~sv~el~~~i~~~~~  245 (324)
T TIGR03589       229 PSMKITDLAEAMAPECP  245 (324)
T ss_pred             CcEEHHHHHHHHHhhCC
Confidence            77999999999998764

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN00016 RNA-binding protein; Provisional

Probab=99.83  E-value=3.4e-19  Score=136.79  Aligned_cols=147  Identities=19%  Similarity=0.198  Sum_probs=109.7

Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcCCc
Q 030406            5 AVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGVD   84 (178)
Q Consensus         5 nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~   84 (178)
                      ++.++++++++|++.|+++|||+|| .++|+.....+   ..|+++      ..|.+    +|..+|.+++    +.+++
T Consensus       141 ~~~~~~~ll~aa~~~gvkr~V~~SS-~~vyg~~~~~p---~~E~~~------~~p~~----sK~~~E~~l~----~~~l~  202 (378)
T PLN00016        141 DLDEVEPVADWAKSPGLKQFLFCSS-AGVYKKSDEPP---HVEGDA------VKPKA----GHLEVEAYLQ----KLGVN  202 (378)
T ss_pred             CHHHHHHHHHHHHHcCCCEEEEEcc-HhhcCCCCCCC---CCCCCc------CCCcc----hHHHHHHHHH----HcCCC
Confidence            3678999999999999999999999 57887654333   566542      22322    7999998875    34899


Q ss_pred             EEEecCCceeCCCCCCCChhhHHHHH-HHHhCCccc---cCCCCcccccHHHHHHHHHHhhcCCCC-CCcEEE-ecCccC
Q 030406           85 LVVVNPVLVLGPLLQSTVNASIIHIL-KYLNGSAKT---YANSVQAYVHVRDVALAHILVYETPSA-SGRYLC-AESVLH  158 (178)
Q Consensus        85 ~~i~R~~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~~~-~~~~~s  158 (178)
                      ++++||+++||+.....   ....+. +...+....   .|.+.++|+|++|+++++..+++.+.. ++.||+ +++.+|
T Consensus       203 ~~ilRp~~vyG~~~~~~---~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s  279 (378)
T PLN00016        203 WTSFRPQYIYGPGNNKD---CEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVT  279 (378)
T ss_pred             eEEEeceeEECCCCCCc---hHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecCCCccC
Confidence            99999999999975432   222222 344444422   246788999999999999999988644 458887 467899


Q ss_pred             HHHHHHHHHHhCCC
Q 030406          159 RGEVVEILAKFFPE  172 (178)
Q Consensus       159 ~~e~~~~i~~~~~~  172 (178)
                      ++|+++.+++.++.
T Consensus       280 ~~el~~~i~~~~g~  293 (378)
T PLN00016        280 FDGMAKACAKAAGF  293 (378)
T ss_pred             HHHHHHHHHHHhCC
Confidence            99999999998753

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.83  E-value=9.9e-19  Score=133.18  Aligned_cols=161  Identities=22%  Similarity=0.223  Sum_probs=113.1

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      .++|+.++.+++++|.+.++++|+|+||. ++|+.....+   ..|++.... ....+.+.|+.+|..+|.+++.+.+. 
T Consensus       109 ~~~nv~g~~~ll~~a~~~~~~~~v~iSS~-~v~~~~~~~~---~~~~~~~~~-~~~~~~~~Y~~sK~~~E~~~~~~~~~-  182 (367)
T TIGR01746       109 RAANVLGTREVLRLAASGRAKPLHYVSTI-SVLAAIDLST---VTEDDAIVT-PPPGLAGGYAQSKWVAELLVREASDR-  182 (367)
T ss_pred             hhhhhHHHHHHHHHHhhCCCceEEEEccc-cccCCcCCCC---ccccccccc-cccccCCChHHHHHHHHHHHHHHHhc-
Confidence            36899999999999999999999999994 6665432222   334332211 11234578999999999999987654 


Q ss_pred             CCcEEEecCCceeCCCCCCCCh--hhHHHHH-HHHhCCc-cccCCCCcccccHHHHHHHHHHhhcCCCC---CCcEEE-e
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVN--ASIIHIL-KYLNGSA-KTYANSVQAYVHVRDVALAHILVYETPSA---SGRYLC-A  153 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~--~~~~~~~-~~~~~~~-~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~-~  153 (178)
                      |++++++||+.++|+...+...  ..+..+. ....... +.......+++|++|++++++.++..+..   ++.|++ +
T Consensus       183 g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~  262 (367)
T TIGR01746       183 GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVN  262 (367)
T ss_pred             CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecC
Confidence            8999999999999974433211  1222222 2222222 22222367899999999999999877654   458886 5


Q ss_pred             cCccCHHHHHHHHHH
Q 030406          154 ESVLHRGEVVEILAK  168 (178)
Q Consensus       154 ~~~~s~~e~~~~i~~  168 (178)
                      +++++++|+++.+.+
T Consensus       263 ~~~~s~~e~~~~i~~  277 (367)
T TIGR01746       263 PEPVSLDEFLEWLER  277 (367)
T ss_pred             CCCCCHHHHHHHHHH
Confidence            689999999999998

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1e-18  Score=142.72  Aligned_cols=159  Identities=19%  Similarity=0.115  Sum_probs=115.5

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      .++|+.++.+++++|++.++++|||+|| .++|+.... +   ++|+++..   +..+.+.|+.+|..+|+++++   ..
T Consensus        98 ~~~nv~gt~~ll~~a~~~~~~~~v~~SS-~~v~g~~~~-~---~~e~~~~~---~~~~~~~Y~~sK~~~E~~~~~---~~  166 (657)
T PRK07201         98 RAANVDGTRNVVELAERLQAATFHHVSS-IAVAGDYEG-V---FREDDFDE---GQGLPTPYHRTKFEAEKLVRE---EC  166 (657)
T ss_pred             HHHHhHHHHHHHHHHHhcCCCeEEEEec-cccccCccC-c---cccccchh---hcCCCCchHHHHHHHHHHHHH---cC
Confidence            4689999999999999999999999999 577764322 1   45554321   224567899999999999875   35


Q ss_pred             CCcEEEecCCceeCCCCCCCCh-----hhH-HHHHHHHhCCc---ccc--CCCCcccccHHHHHHHHHHhhcCCCC-CCc
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVN-----ASI-IHILKYLNGSA---KTY--ANSVQAYVHVRDVALAHILVYETPSA-SGR  149 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~-----~~~-~~~~~~~~~~~---~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~  149 (178)
                      +++++++||+++||+...+...     ..+ ..+... ....   +..  +.+.++++|++|+++++..+++.+.. ++.
T Consensus       167 g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~~~~~g~~  245 (657)
T PRK07201        167 GLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKL-AKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMHKDGRDGQT  245 (657)
T ss_pred             CCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHh-ccCCcccccccCCCCeeeeeeHHHHHHHHHHHhcCcCCCCCE
Confidence            8999999999999986543211     111 122222 1111   111  34578999999999999999886554 448


Q ss_pred             EEE-ecCccCHHHHHHHHHHhCCC
Q 030406          150 YLC-AESVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       150 ~~~-~~~~~s~~e~~~~i~~~~~~  172 (178)
                      ||+ ++++++++|+++.+++.++.
T Consensus       246 ~ni~~~~~~s~~el~~~i~~~~g~  269 (657)
T PRK07201        246 FHLTDPKPQRVGDIYNAFARAAGA  269 (657)
T ss_pred             EEeCCCCCCcHHHHHHHHHHHhCC
Confidence            886 56899999999999998853

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.80  E-value=4.7e-19  Score=128.99  Aligned_cols=141  Identities=20%  Similarity=0.161  Sum_probs=109.5

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++||.||.|++++|.++++++||++||.-+                        .+|.+.||.||+.+|+++..++...
T Consensus       101 v~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA------------------------v~PtnvmGatKrlaE~l~~~~~~~~  156 (293)
T PF02719_consen  101 VKTNVLGTQNVAEAAIEHGVERFVFISTDKA------------------------VNPTNVMGATKRLAEKLVQAANQYS  156 (293)
T ss_dssp             HHHHCHHHHHHHHHHHHTT-SEEEEEEECGC------------------------SS--SHHHHHHHHHHHHHHHHCCTS
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEcccccc------------------------CCCCcHHHHHHHHHHHHHHHHhhhC
Confidence            5789999999999999999999999999433                        2688999999999999999987665


Q ss_pred             ---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccc---cCCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ec
Q 030406           82 ---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT---YANSVQAYVHVRDVALAHILVYETPSASGRYLC-AE  154 (178)
Q Consensus        82 ---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~  154 (178)
                         +..++++|+|+|.|...     +.++.+.+.++...|.   .++..|-|+.+++.++.++.+......++.|+. -+
T Consensus       157 ~~~~t~f~~VRFGNVlgS~G-----SVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~~~geifvl~mg  231 (293)
T PF02719_consen  157 GNSDTKFSSVRFGNVLGSRG-----SVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALAKGGEIFVLDMG  231 (293)
T ss_dssp             SSS--EEEEEEE-EETTGTT-----SCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH--TTEEEEE---
T ss_pred             CCCCcEEEEEEecceecCCC-----cHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhCCCCcEEEecCC
Confidence               57899999999998652     3566677666655544   268899999999999999999988777778877 46


Q ss_pred             CccCHHHHHHHHHHhCC
Q 030406          155 SVLHRGEVVEILAKFFP  171 (178)
Q Consensus       155 ~~~s~~e~~~~i~~~~~  171 (178)
                      +++++.|+++.+.+.++
T Consensus       232 ~~v~I~dlA~~~i~~~g  248 (293)
T PF02719_consen  232 EPVKILDLAEAMIELSG  248 (293)
T ss_dssp             TCEECCCHHHHHHHHTT
T ss_pred             CCcCHHHHHHHHHhhcc
Confidence            89999999999988774

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.79  E-value=8.9e-18  Score=125.06  Aligned_cols=151  Identities=14%  Similarity=0.152  Sum_probs=106.1

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCC---CCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSP---DDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~---~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.+|.+|+++|++.++++ +++|| +++|+.....+   ..+++|+++     +..+.+.|+.+|+++|+++..|.
T Consensus        84 ~~~Nv~gt~~ll~aa~~~gv~~-v~~sS-~~vy~~~~~~p~~~~~~~~Ee~~-----p~~~~s~Yg~sK~~~E~~~~~y~  156 (298)
T PLN02778         84 IRANVVGTLTLADVCRERGLVL-TNYAT-GCIFEYDDAHPLGSGIGFKEEDT-----PNFTGSFYSKTKAMVEELLKNYE  156 (298)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCE-EEEec-ceEeCCCCCCCcccCCCCCcCCC-----CCCCCCchHHHHHHHHHHHHHhh
Confidence            4689999999999999999874 55566 46765332111   123676652     22355899999999999998865


Q ss_pred             HhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecCcc
Q 030406           79 VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLC-AESVL  157 (178)
Q Consensus        79 ~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~~~  157 (178)
                           +..++|++.++|++....  ..  .+...+.+.....  ...+|+|++|++++++.+++... .+.||+ +++.+
T Consensus       157 -----~~~~lr~~~~~~~~~~~~--~~--fi~~~~~~~~~~~--~~~s~~yv~D~v~al~~~l~~~~-~g~yNigs~~~i  224 (298)
T PLN02778        157 -----NVCTLRVRMPISSDLSNP--RN--FITKITRYEKVVN--IPNSMTILDELLPISIEMAKRNL-TGIYNFTNPGVV  224 (298)
T ss_pred             -----ccEEeeecccCCcccccH--HH--HHHHHHcCCCeeE--cCCCCEEHHHHHHHHHHHHhCCC-CCeEEeCCCCcc
Confidence                 457888887777642211  11  2334444443222  12479999999999999997653 469987 66789


Q ss_pred             CHHHHHHHHHHhCC
Q 030406          158 HRGEVVEILAKFFP  171 (178)
Q Consensus       158 s~~e~~~~i~~~~~  171 (178)
                      |++|+++.+++.++
T Consensus       225 S~~el~~~i~~~~~  238 (298)
T PLN02778        225 SHNEILEMYRDYID  238 (298)
T ss_pred             cHHHHHHHHHHHhC
Confidence            99999999999885

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.79  E-value=1e-18  Score=121.04  Aligned_cols=166  Identities=17%  Similarity=0.215  Sum_probs=128.0

Q ss_pred             CchhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         1 ~~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++.|+....|++..|-++|+++++++.| +++|++....|   ++|+..+..+ +....-+|+.+|.+++-.-+.|..+
T Consensus        79 F~r~Nl~indNVlhsa~e~gv~K~vsclS-tCIfPdkt~yP---IdEtmvh~gp-phpsN~gYsyAKr~idv~n~aY~~q  153 (315)
T KOG1431|consen   79 FIRKNLQINDNVLHSAHEHGVKKVVSCLS-TCIFPDKTSYP---IDETMVHNGP-PHPSNFGYSYAKRMIDVQNQAYRQQ  153 (315)
T ss_pred             HHhhcceechhHHHHHHHhchhhhhhhcc-eeecCCCCCCC---CCHHHhccCC-CCCCchHHHHHHHHHHHHHHHHHHH
Confidence            36778888899999999999999999999 79998887777   9998866543 2234457999999999888999999


Q ss_pred             cCCcEEEecCCceeCCCCCCCCh--hhHHHHH----HHHh-CC--ccccC--CCCcccccHHHHHHHHHHhhcCCCCCCc
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTVN--ASIIHIL----KYLN-GS--AKTYA--NSVQAYVHVRDVALAHILVYETPSASGR  149 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~~--~~~~~~~----~~~~-~~--~~~~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~  149 (178)
                      +|...+.+.|+++|||..+-...  ..++.++    .+.. |.  ...+|  .-.++|+|++|+|+++++++.+-+.-+-
T Consensus       154 hg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~~vEp  233 (315)
T KOG1431|consen  154 HGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLREYEGVEP  233 (315)
T ss_pred             hCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHhhcCccc
Confidence            99999999999999997653221  1233222    2222 22  13344  5689999999999999999988655554


Q ss_pred             EEE-ecC--ccCHHHHHHHHHHhCC
Q 030406          150 YLC-AES--VLHRGEVVEILAKFFP  171 (178)
Q Consensus       150 ~~~-~~~--~~s~~e~~~~i~~~~~  171 (178)
                      .++ .++  .+|++|+++++.+.+.
T Consensus       234 iils~ge~~EVtI~e~aeaV~ea~~  258 (315)
T KOG1431|consen  234 IILSVGESDEVTIREAAEAVVEAVD  258 (315)
T ss_pred             eEeccCccceeEHHHHHHHHHHHhC
Confidence            454 455  8999999999999863

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.77  E-value=2e-17  Score=128.24  Aligned_cols=141  Identities=18%  Similarity=0.145  Sum_probs=118.2

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++||.||.|++++|.++++++||.+||.-++                        +|.|.||.||+.+|.++..+.+..
T Consensus       349 i~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV------------------------~PtNvmGaTKr~aE~~~~a~~~~~  404 (588)
T COG1086         349 IKTNVLGTENVAEAAIKNGVKKFVLISTDKAV------------------------NPTNVMGATKRLAEKLFQAANRNV  404 (588)
T ss_pred             HHHhhHhHHHHHHHHHHhCCCEEEEEecCccc------------------------CCchHhhHHHHHHHHHHHHHhhcc
Confidence            57899999999999999999999999995443                        588999999999999999987644


Q ss_pred             C---CcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccc---cCCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ec
Q 030406           82 G---VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT---YANSVQAYVHVRDVALAHILVYETPSASGRYLC-AE  154 (178)
Q Consensus        82 ~---~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~  154 (178)
                      +   ..++++|+|||.|.+.     +.++.+.+.++...|.   .++..|-|+.+.|.++.++++......+++|.. -|
T Consensus       405 ~~~~T~f~~VRFGNVlGSrG-----SViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~~~gGeifvldMG  479 (588)
T COG1086         405 SGTGTRFCVVRFGNVLGSRG-----SVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAIAKGGEIFVLDMG  479 (588)
T ss_pred             CCCCcEEEEEEecceecCCC-----CCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHhhcCCCcEEEEcCC
Confidence            3   7899999999999762     3455566655544433   268899999999999999999999877779987 56


Q ss_pred             CccCHHHHHHHHHHhCC
Q 030406          155 SVLHRGEVVEILAKFFP  171 (178)
Q Consensus       155 ~~~s~~e~~~~i~~~~~  171 (178)
                      +++.+.|+++.|-+.++
T Consensus       480 epvkI~dLAk~mi~l~g  496 (588)
T COG1086         480 EPVKIIDLAKAMIELAG  496 (588)
T ss_pred             CCeEHHHHHHHHHHHhC
Confidence            99999999999988774

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.75  E-value=3.7e-17  Score=122.82  Aligned_cols=137  Identities=15%  Similarity=0.139  Sum_probs=101.4

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++++++||||+||.++ .            +          .+.+.|..+|..+|++++    +.
T Consensus        83 ~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~-~------------~----------~~~~~~~~~K~~~e~~l~----~~  135 (317)
T CHL00194         83 KQIDWDGKLALIEAAKAAKIKRFIFFSILNA-E------------Q----------YPYIPLMKLKSDIEQKLK----KS  135 (317)
T ss_pred             hhhhHHHHHHHHHHHHHcCCCEEEEeccccc-c------------c----------cCCChHHHHHHHHHHHHH----Hc
Confidence            4679999999999999999999999998421 1            0          123458889999999875    45


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccc--cCCCCcccccHHHHHHHHHHhhcCCCC-CCcEEE-ecCcc
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT--YANSVQAYVHVRDVALAHILVYETPSA-SGRYLC-AESVL  157 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~~~-~~~~~  157 (178)
                      +++++++||+.+|+.-...       .....+.+.+..  .+++.++|+|++|+|++++.+++.+.. ++.|++ +++.+
T Consensus       136 ~l~~tilRp~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~  208 (317)
T CHL00194        136 GIPYTIFRLAGFFQGLISQ-------YAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSW  208 (317)
T ss_pred             CCCeEEEeecHHhhhhhhh-------hhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCCcc
Confidence            8999999999887632110       011122222221  145678999999999999999987654 458887 56789


Q ss_pred             CHHHHHHHHHHhCCC
Q 030406          158 HRGEVVEILAKFFPE  172 (178)
Q Consensus       158 s~~e~~~~i~~~~~~  172 (178)
                      |++|+++.+++.+++
T Consensus       209 s~~el~~~~~~~~g~  223 (317)
T CHL00194        209 NSSEIISLCEQLSGQ  223 (317)
T ss_pred             CHHHHHHHHHHHhCC
Confidence            999999999998854

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.74  E-value=9.5e-17  Score=114.52  Aligned_cols=156  Identities=17%  Similarity=0.184  Sum_probs=121.6

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++-+..|..|.++..+.  +.+.+|-.|. ..+||+..+..   ++|+++       ...+.-+..=..-|....+ ++
T Consensus        82 ~~SRi~~T~~L~e~I~~~~~~P~~~isaSA-vGyYG~~~~~~---~tE~~~-------~g~~Fla~lc~~WE~~a~~-a~  149 (297)
T COG1090          82 RQSRINTTEKLVELIAASETKPKVLISASA-VGYYGHSGDRV---VTEESP-------PGDDFLAQLCQDWEEEALQ-AQ  149 (297)
T ss_pred             HHHHhHHHHHHHHHHHhccCCCcEEEecce-EEEecCCCcee---eecCCC-------CCCChHHHHHHHHHHHHhh-hh
Confidence            467789999999999864  4566666666 68898876665   888862       2334444444556666665 45


Q ss_pred             hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecCccC
Q 030406           80 ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLC-AESVLH  158 (178)
Q Consensus        80 ~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~~~s  158 (178)
                      +.|.+++++|.|+|.|+....  -..+....+...|.+.+.|+|+++|||++|+++++..++++++..|.||+ ++.|++
T Consensus       150 ~~gtRvvllRtGvVLs~~GGa--L~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~lsGp~N~taP~PV~  227 (297)
T COG1090         150 QLGTRVVLLRTGVVLSPDGGA--LGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSGPFNLTAPNPVR  227 (297)
T ss_pred             hcCceEEEEEEEEEecCCCcc--hhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCCCCcccccCCCcCc
Confidence            668999999999999976332  12333455777788888999999999999999999999999999999985 899999


Q ss_pred             HHHHHHHHHHhCC
Q 030406          159 RGEVVEILAKFFP  171 (178)
Q Consensus       159 ~~e~~~~i~~~~~  171 (178)
                      .+++.+.+++.++
T Consensus       228 ~~~F~~al~r~l~  240 (297)
T COG1090         228 NKEFAHALGRALH  240 (297)
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999999985

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.73  E-value=1.2e-17  Score=121.50  Aligned_cols=134  Identities=24%  Similarity=0.190  Sum_probs=77.4

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCC-CCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSP-DDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~-~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++||.||++|++.|.+.+.++|+|+|| +.+.+...... ...+.++. ..........++|..||+.+|++++++.++
T Consensus       108 ~~~NV~gt~~ll~la~~~~~~~~~~iST-a~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~  185 (249)
T PF07993_consen  108 RAVNVDGTRNLLRLAAQGKRKRFHYIST-AYVAGSRPGTIEEKVYPEEE-DDLDPPQGFPNGYEQSKWVAERLLREAAQR  185 (249)
T ss_dssp             HHHHHHHHHHHHHHHTSSS---EEEEEE-GGGTTS-TTT--SSS-HHH---EEE--TTSEE-HHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHhccCcceEEecc-ccccCCCCCccccccccccc-ccchhhccCCccHHHHHHHHHHHHHHHHhc
Confidence            5789999999999999877779999999 66655443221 00000110 011122356689999999999999999888


Q ss_pred             cCCcEEEecCCceeCCCCCCCChh---hHHHHHH-HHhCCcccc---CCCCcccccHHHHHHHH
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTVNA---SIIHILK-YLNGSAKTY---ANSVQAYVHVRDVALAH  137 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~~~---~~~~~~~-~~~~~~~~~---~~~~~~~i~v~D~a~~~  137 (178)
                      .|++++|+||+.|+|....+..+.   ....+.. ...+..+..   ++...++++||.+|++|
T Consensus       186 ~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  186 HGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDLVPVDYVARAI  249 (249)
T ss_dssp             H---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--EEEHHHHHHHH
T ss_pred             CCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeEECHHHHHhhC
Confidence            799999999999999654433221   2222332 233443433   24579999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.71  E-value=2.1e-16  Score=126.33  Aligned_cols=167  Identities=15%  Similarity=0.157  Sum_probs=113.4

Q ss_pred             chhHHHHHHHHHHHHHhC-CCCEEEEeccccccccCCCCCCCCccCCCCCC----------------------ch-----
Q 030406            2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWS----------------------DL-----   53 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~----------------------~~-----   53 (178)
                      +++|+.||.+++++|++. +.++|||+|| +.+||.....    +.|..+.                      +.     
T Consensus       240 ~~vNV~GT~nLLelA~~~~~lk~fV~vST-ayVyG~~~G~----i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~  314 (605)
T PLN02503        240 IDINTRGPCHLMSFAKKCKKLKLFLQVST-AYVNGQRQGR----IMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIK  314 (605)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCeEEEccC-ceeecCCCCe----eeeeecCcccccccccccccccccccccCCHHHHHH
Confidence            578999999999999986 5789999999 7888865311    2222211                      00     


Q ss_pred             ------h--------------------hhcccCchHHHHHHHHHHHHHHHHHhcCCcEEEecCCceeCCCCC------CC
Q 030406           54 ------E--------------------FCKNTKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQ------ST  101 (178)
Q Consensus        54 ------~--------------------~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~R~~~v~G~~~~------~~  101 (178)
                            .                    ......+.|+.||.++|++++++.  .++|++|+||+.|.+....      ..
T Consensus       315 ~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~  392 (605)
T PLN02503        315 LALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEG  392 (605)
T ss_pred             HHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEcCCEecccccCCccccccC
Confidence                  0                    001345899999999999999754  4899999999999442211      11


Q ss_pred             ChhhHHHHHHHHhCCccc---cCCCCcccccHHHHHHHHHHhhcC-C----CCCCcEEE-ec--CccCHHHHHHHHHHhC
Q 030406          102 VNASIIHILKYLNGSAKT---YANSVQAYVHVRDVALAHILVYET-P----SASGRYLC-AE--SVLHRGEVVEILAKFF  170 (178)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~~-~----~~~~~~~~-~~--~~~s~~e~~~~i~~~~  170 (178)
                      .....+.+....+|....   .++...|+|+||.++++++.++.. .    ....+||+ ++  ++++++++.+.+.+++
T Consensus       393 ~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~  472 (605)
T PLN02503        393 NRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHY  472 (605)
T ss_pred             ccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHH
Confidence            001112222223444332   246789999999999999988432 1    12458987 45  7899999999999988


Q ss_pred             CCCCC
Q 030406          171 PEYPI  175 (178)
Q Consensus       171 ~~~~~  175 (178)
                      .+.|+
T Consensus       473 ~~~P~  477 (605)
T PLN02503        473 KSSPY  477 (605)
T ss_pred             hhCCc
Confidence            66554

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.71  E-value=9.8e-16  Score=134.11  Aligned_cols=164  Identities=23%  Similarity=0.183  Sum_probs=113.2

Q ss_pred             hhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCC---------CCCccCCCCCCchhhhcccCchHHHHHHHHHHH
Q 030406            3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRS---------PDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKA   73 (178)
Q Consensus         3 ~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~---------~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~   73 (178)
                      ..|+.||.+++++|++.++++|+|+|| .++|+.....         ....+.|+.+.... ...+.+.|+.+|+.+|++
T Consensus      1083 ~~nv~gt~~ll~~a~~~~~~~~v~vSS-~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~Y~~sK~~aE~l 1160 (1389)
T TIGR03443      1083 DANVIGTINVLNLCAEGKAKQFSFVSS-TSALDTEYYVNLSDELVQAGGAGIPESDDLMGS-SKGLGTGYGQSKWVAEYI 1160 (1389)
T ss_pred             HhHHHHHHHHHHHHHhCCCceEEEEeC-eeecCcccccchhhhhhhccCCCCCcccccccc-cccCCCChHHHHHHHHHH
Confidence            479999999999999999999999999 5676532110         01124454322211 223557899999999999


Q ss_pred             HHHHHHhcCCcEEEecCCceeCCCCCCCCh--hhHHHHHH-HHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC---C
Q 030406           74 AWEEAVARGVDLVVVNPVLVLGPLLQSTVN--ASIIHILK-YLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA---S  147 (178)
Q Consensus        74 ~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~  147 (178)
                      +..+.+ .|++++++||++|||++..+..+  ..+..+.+ .........+.+.++|++++|++++++.++..+..   .
T Consensus      1161 ~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~ 1239 (1389)
T TIGR03443      1161 IREAGK-RGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESEL 1239 (1389)
T ss_pred             HHHHHh-CCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCC
Confidence            998765 49999999999999987554322  12222222 11111122245679999999999999999876532   2


Q ss_pred             CcEEE-ecCccCHHHHHHHHHHh
Q 030406          148 GRYLC-AESVLHRGEVVEILAKF  169 (178)
Q Consensus       148 ~~~~~-~~~~~s~~e~~~~i~~~  169 (178)
                      ..|++ ++..+++.++++.+++.
T Consensus      1240 ~i~~~~~~~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443      1240 AVAHVTGHPRIRFNDFLGTLKTY 1262 (1389)
T ss_pred             CEEEeCCCCCCcHHHHHHHHHHh
Confidence            36776 45688999999999764

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.70  E-value=4.1e-16  Score=120.09  Aligned_cols=137  Identities=16%  Similarity=0.089  Sum_probs=103.6

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++||++||. ++++                       |...|..+|...|+.+..  .+.
T Consensus       155 ~~vn~~~~~~ll~aa~~~gv~r~V~iSS~-~v~~-----------------------p~~~~~~sK~~~E~~l~~--~~~  208 (390)
T PLN02657        155 WKIDYQATKNSLDAGREVGAKHFVLLSAI-CVQK-----------------------PLLEFQRAKLKFEAELQA--LDS  208 (390)
T ss_pred             hhhHHHHHHHHHHHHHHcCCCEEEEEeec-cccC-----------------------cchHHHHHHHHHHHHHHh--ccC
Confidence            57899999999999999999999999994 4431                       234588999999999875  356


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCcc-ccCC--CCc-ccccHHHHHHHHHHhhcCCCC-CCcEEEec--
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK-TYAN--SVQ-AYVHVRDVALAHILVYETPSA-SGRYLCAE--  154 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~-~~i~v~D~a~~~~~~~~~~~~-~~~~~~~~--  154 (178)
                      +++++|+||+.+||+.     ...   +.....+.+. .+|+  ..+ ++||++|+|++++.++..+.. +..|++++  
T Consensus       209 gl~~tIlRp~~~~~~~-----~~~---~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~  280 (390)
T PLN02657        209 DFTYSIVRPTAFFKSL-----GGQ---VEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPG  280 (390)
T ss_pred             CCCEEEEccHHHhccc-----HHH---HHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCC
Confidence            8999999999999742     111   2233344443 3344  333 579999999999999876544 45888754  


Q ss_pred             CccCHHHHHHHHHHhCCC
Q 030406          155 SVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       155 ~~~s~~e~~~~i~~~~~~  172 (178)
                      +.+|++|+++++.+.+++
T Consensus       281 ~~~S~~Eia~~l~~~lG~  298 (390)
T PLN02657        281 KALTPLEQGEMLFRILGK  298 (390)
T ss_pred             cccCHHHHHHHHHHHhCC
Confidence            589999999999998854

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.68  E-value=2e-15  Score=105.56  Aligned_cols=165  Identities=18%  Similarity=0.223  Sum_probs=125.8

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      .++|+.|..|+++.|++++.+ +..-||++++.+...+.|.   +.-      ....|..-||.||+.+|.+-+.+..++
T Consensus       133 ~~VNI~GvHNil~vAa~~kL~-iFVPSTIGAFGPtSPRNPT---Pdl------tIQRPRTIYGVSKVHAEL~GEy~~hrF  202 (366)
T KOG2774|consen  133 LQVNIRGVHNILQVAAKHKLK-VFVPSTIGAFGPTSPRNPT---PDL------TIQRPRTIYGVSKVHAELLGEYFNHRF  202 (366)
T ss_pred             eeecchhhhHHHHHHHHcCee-EeecccccccCCCCCCCCC---CCe------eeecCceeechhHHHHHHHHHHHHhhc
Confidence            468999999999999999975 5556787666554433331   111      123688999999999999999999999


Q ss_pred             CCcEEEecCCceeCCCCCC--CChhhHHHHHHH-HhCCcccc--CCCCcccccHHHHHHHHHHhhcCCCC---CCcEEEe
Q 030406           82 GVDLVVVNPVLVLGPLLQS--TVNASIIHILKY-LNGSAKTY--ANSVQAYVHVRDVALAHILVYETPSA---SGRYLCA  153 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~--~~~~~~~~~~~~-~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~  153 (178)
                      |+++..+|++.++.....+  ........+..+ .+|+..+.  ++....++|.+||.++++..+.++..   ...||+.
T Consensus       203 g~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt  282 (366)
T KOG2774|consen  203 GVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKRRTYNVT  282 (366)
T ss_pred             CccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHHhhhheeeec
Confidence            9999999999888753322  222233334433 45665554  78899999999999999999887643   3489999


Q ss_pred             cCccCHHHHHHHHHHhCCCCCCC
Q 030406          154 ESVLHRGEVVEILAKFFPEYPIP  176 (178)
Q Consensus       154 ~~~~s~~e~~~~i~~~~~~~~~p  176 (178)
                      +.+.+-.|+++.++++.|++.+.
T Consensus       283 ~~sftpee~~~~~~~~~p~~~i~  305 (366)
T KOG2774|consen  283 GFSFTPEEIADAIRRVMPGFEID  305 (366)
T ss_pred             eeccCHHHHHHHHHhhCCCceee
Confidence            99999999999999999987654

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.65  E-value=6.6e-15  Score=105.43  Aligned_cols=159  Identities=15%  Similarity=0.075  Sum_probs=127.6

Q ss_pred             hhHHHHHHHHHHHHHhCCC--CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            3 EPAVIGTKNVIVAAAEAKV--RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         3 ~~nv~~t~~ll~~~~~~~~--~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++-.||.+||++.+..+.  .||...|| +..||.-...|   .+|++      |..|.++|+.+|+.+-.+...|.+.
T Consensus       103 ~~~~iGtlrlLEaiR~~~~~~~rfYQASt-SE~fG~v~~~p---q~E~T------PFyPrSPYAvAKlYa~W~tvNYRes  172 (345)
T COG1089         103 DVDAIGTLRLLEAIRILGEKKTRFYQAST-SELYGLVQEIP---QKETT------PFYPRSPYAVAKLYAYWITVNYRES  172 (345)
T ss_pred             eechhHHHHHHHHHHHhCCcccEEEeccc-HHhhcCcccCc---cccCC------CCCCCCHHHHHHHHHHheeeehHhh
Confidence            5678899999999998643  58999999 89999776666   78887      6689999999999999999999999


Q ss_pred             cCCcEEEecCCceeCCCCCCC--ChhhHHHHHHHHhCCccc--cC--CCCcccccHHHHHHHHHHhhcCCCCCCcEEEec
Q 030406           81 RGVDLVVVNPVLVLGPLLQST--VNASIIHILKYLNGSAKT--YA--NSVQAYVHVRDVALAHILVYETPSASGRYLCAE  154 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~--~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~  154 (178)
                      +|+-.+.-+.++--+|.+...  .......+.+...|....  .|  +..+||-|+.|-+++++++++++.+....+.++
T Consensus       173 Ygl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~~PddyViATg  252 (345)
T COG1089         173 YGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQEEPDDYVIATG  252 (345)
T ss_pred             cCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHccCCCCceEEecC
Confidence            999888888777777765442  223344555666666632  24  689999999999999999999987544445689


Q ss_pred             CccCHHHHHHHHHHhCC
Q 030406          155 SVLHRGEVVEILAKFFP  171 (178)
Q Consensus       155 ~~~s~~e~~~~i~~~~~  171 (178)
                      +..|++|+++...+..+
T Consensus       253 ~t~sVrefv~~Af~~~g  269 (345)
T COG1089         253 ETHSVREFVELAFEMVG  269 (345)
T ss_pred             ceeeHHHHHHHHHHHcC
Confidence            99999999999888764

>PRK05865 hypothetical protein; Provisional

Probab=99.62  E-value=1.5e-14  Score=119.35  Aligned_cols=123  Identities=23%  Similarity=0.204  Sum_probs=93.1

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++|||+||. .                                  |..+|+++.    ++
T Consensus        76 ~~vNv~GT~nLLeAa~~~gvkr~V~iSS~-~----------------------------------K~aaE~ll~----~~  116 (854)
T PRK05865         76 DHINIDGTANVLKAMAETGTGRIVFTSSG-H----------------------------------QPRVEQMLA----DC  116 (854)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCeEEEECCc-H----------------------------------HHHHHHHHH----Hc
Confidence            57899999999999999999999999983 1                                  678888764    35


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccC--CCCcccccHHHHHHHHHHhhcCCC-CCCcEEE-ecCcc
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYA--NSVQAYVHVRDVALAHILVYETPS-ASGRYLC-AESVL  157 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~~~-~~~~~  157 (178)
                      +++++++||+++||++..    ..   +...........|  +..++|+|++|+++++..+++.+. .++.||+ +++.+
T Consensus       117 gl~~vILRp~~VYGP~~~----~~---i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~  189 (854)
T PRK05865        117 GLEWVAVRCALIFGRNVD----NW---VQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGEL  189 (854)
T ss_pred             CCCEEEEEeceEeCCChH----HH---HHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcc
Confidence            899999999999998621    11   1122211112223  346799999999999999987543 4568986 56789


Q ss_pred             CHHHHHHHHHHhC
Q 030406          158 HRGEVVEILAKFF  170 (178)
Q Consensus       158 s~~e~~~~i~~~~  170 (178)
                      |++|+++.+++..
T Consensus       190 Si~EIae~l~~~~  202 (854)
T PRK05865        190 TFRRIAAALGRPM  202 (854)
T ss_pred             cHHHHHHHHhhhh
Confidence            9999999998743

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.60  E-value=2.9e-15  Score=107.35  Aligned_cols=139  Identities=20%  Similarity=0.237  Sum_probs=108.9

Q ss_pred             CchhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         1 ~~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +.++|+.++.+|...|+++|+.||||+|+..+-                       ....+-|-.+|.++|..+++..  
T Consensus       149 f~Dvn~~~aerlAricke~GVerfIhvS~Lgan-----------------------v~s~Sr~LrsK~~gE~aVrdaf--  203 (391)
T KOG2865|consen  149 FEDVNVHIAERLARICKEAGVERFIHVSCLGAN-----------------------VKSPSRMLRSKAAGEEAVRDAF--  203 (391)
T ss_pred             cccccchHHHHHHHHHHhhChhheeehhhcccc-----------------------ccChHHHHHhhhhhHHHHHhhC--
Confidence            357899999999999999999999999996321                       1355779999999999998743  


Q ss_pred             cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHh--CCccccCC---CCcccccHHHHHHHHHHhhcCCCCCC-cE-EEe
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLN--GSAKTYAN---SVQAYVHVRDVALAHILVYETPSASG-RY-LCA  153 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~-~~-~~~  153 (178)
                        .+.+|+||..+||...     .++..+....+  +..+.++.   .....|||-|+|.+|+.+++.++..| .| +++
T Consensus       204 --PeAtIirPa~iyG~eD-----rfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vG  276 (391)
T KOG2865|consen  204 --PEATIIRPADIYGTED-----RFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVG  276 (391)
T ss_pred             --Ccceeechhhhcccch-----hHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecC
Confidence              4689999999999762     23333333333  44455542   46788999999999999999998877 88 578


Q ss_pred             cCccCHHHHHHHHHHhCC
Q 030406          154 ESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       154 ~~~~s~~e~~~~i~~~~~  171 (178)
                      +..+++.|+++++-+...
T Consensus       277 P~~yql~eLvd~my~~~~  294 (391)
T KOG2865|consen  277 PDRYQLSELVDIMYDMAR  294 (391)
T ss_pred             CchhhHHHHHHHHHHHHh
Confidence            899999999998876543

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.60  E-value=5.8e-15  Score=109.87  Aligned_cols=163  Identities=22%  Similarity=0.176  Sum_probs=99.6

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCC-CCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSP-DDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~-~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      .+.||.||..+++.|...+.|.++|+||+ +++....... +...+|.++. ......+.++|+.||+.+|.++++..+.
T Consensus       108 ~~~NVlGT~evlrLa~~gk~Kp~~yVSsi-sv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~GY~~SKwvaE~Lvr~A~~r  185 (382)
T COG3320         108 RGANVLGTAEVLRLAATGKPKPLHYVSSI-SVGETEYYSNFTVDFDEISPT-RNVGQGLAGGYGRSKWVAEKLVREAGDR  185 (382)
T ss_pred             cCcchHhHHHHHHHHhcCCCceeEEEeee-eeccccccCCCcccccccccc-ccccCccCCCcchhHHHHHHHHHHHhhc
Confidence            56899999999999999999999999995 6654332211 1112222211 1112357789999999999999998766


Q ss_pred             cCCcEEEecCCceeCCCCCCCChh--hHH-HHHHHHh-CCccccCCCCcccccHHH-----------HHHHHHHhhcCCC
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTVNA--SII-HILKYLN-GSAKTYANSVQAYVHVRD-----------VALAHILVYETPS  145 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~~~--~~~-~~~~~~~-~~~~~~~~~~~~~i~v~D-----------~a~~~~~~~~~~~  145 (178)
                       |++++|+|||.|.|+...+..+.  ++. .+...+. |..|. .....+++.+++           +++++..+...+.
T Consensus       186 -GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~-~~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~  263 (382)
T COG3320         186 -GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPD-SEYSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSD  263 (382)
T ss_pred             -CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCC-cccchhhCccceeeEEeehhhhhHHHHHHHhccCcc
Confidence             99999999999999887554332  121 2222222 22221 122333333333           3333333332221


Q ss_pred             -CCCcEEE--ecCccCHHHHHHHHHH
Q 030406          146 -ASGRYLC--AESVLHRGEVVEILAK  168 (178)
Q Consensus       146 -~~~~~~~--~~~~~s~~e~~~~i~~  168 (178)
                       ....|.+  -+..+.+.++.+.+.+
T Consensus       264 ~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         264 IRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             chhhheecccCCCccchhHHHHhHhh
Confidence             1234442  3678888888888776

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.60  E-value=2.4e-14  Score=117.33  Aligned_cols=149  Identities=13%  Similarity=0.171  Sum_probs=102.5

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCC---CCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNR---SPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~---~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.+|+++|++.+++ +|++|| +.+|+....   ....+++|+++     +..+.+.|+.+|+++|++++.+.
T Consensus       455 ~~~N~~gt~~l~~a~~~~g~~-~v~~Ss-~~v~~~~~~~~~~~~~p~~E~~~-----~~~~~~~Yg~sK~~~E~~~~~~~  527 (668)
T PLN02260        455 IRANVVGTLTLADVCRENGLL-MMNFAT-GCIFEYDAKHPEGSGIGFKEEDK-----PNFTGSFYSKTKAMVEELLREYD  527 (668)
T ss_pred             HHHHhHHHHHHHHHHHHcCCe-EEEEcc-cceecCCcccccccCCCCCcCCC-----CCCCCChhhHHHHHHHHHHHhhh
Confidence            478999999999999999986 667777 577753211   10123777651     22345899999999999998763


Q ss_pred             HhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCcc-ccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecCc
Q 030406           79 VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK-TYANSVQAYVHVRDVALAHILVYETPSASGRYLC-AESV  156 (178)
Q Consensus        79 ~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~~  156 (178)
                           +..++|+.++||...... ..++..+.+   .... ..+   .+..+++|++.+++.+++.+ .+|.||+ +++.
T Consensus       528 -----~~~~~r~~~~~~~~~~~~-~nfv~~~~~---~~~~~~vp---~~~~~~~~~~~~~~~l~~~~-~~giyni~~~~~  594 (668)
T PLN02260        528 -----NVCTLRVRMPISSDLSNP-RNFITKISR---YNKVVNIP---NSMTVLDELLPISIEMAKRN-LRGIWNFTNPGV  594 (668)
T ss_pred             -----hheEEEEEEecccCCCCc-cHHHHHHhc---cceeeccC---CCceehhhHHHHHHHHHHhC-CCceEEecCCCc
Confidence                 467888888886542221 223333333   2221 122   35677889999988888743 3579987 5567


Q ss_pred             cCHHHHHHHHHHhC
Q 030406          157 LHRGEVVEILAKFF  170 (178)
Q Consensus       157 ~s~~e~~~~i~~~~  170 (178)
                      +|+.|+++.+++.+
T Consensus       595 ~s~~e~a~~i~~~~  608 (668)
T PLN02260        595 VSHNEILEMYKDYI  608 (668)
T ss_pred             CcHHHHHHHHHHhc
Confidence            99999999999876

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.49  E-value=8.5e-13  Score=91.90  Aligned_cols=160  Identities=21%  Similarity=0.191  Sum_probs=114.3

Q ss_pred             hhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            3 EPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         3 ~~nv~~t~~ll~~~~~~~--~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      ...+..|..|.++...+.  .+.+|.+|. .++|-......   ++|+++      ...-+....--..-|......  .
T Consensus       102 gSRi~~t~~la~aI~~aPq~~~~~Vlv~g-va~y~pS~s~e---Y~e~~~------~qgfd~~srL~l~WE~aA~~~--~  169 (315)
T KOG3019|consen  102 GSRIRVTSKLADAINNAPQEARPTVLVSG-VAVYVPSESQE---YSEKIV------HQGFDILSRLCLEWEGAALKA--N  169 (315)
T ss_pred             cceeeHHHHHHHHHhcCCCCCCCeEEEEe-eEEeccccccc---cccccc------cCChHHHHHHHHHHHHHhhcc--C
Confidence            344567888888888763  568999998 58886554444   777752      111122222122333333322  2


Q ss_pred             cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEE-EecCccCH
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYL-CAESVLHR  159 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~-~~~~~~s~  159 (178)
                      .+++.+++|.|.|.|.+...  -..+....++..|.+.+.|.+.+.|||++|++..+..+++++...|+.| +++++.+.
T Consensus       170 ~~~r~~~iR~GvVlG~gGGa--~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale~~~v~GViNgvAP~~~~n  247 (315)
T KOG3019|consen  170 KDVRVALIRIGVVLGKGGGA--LAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALENPSVKGVINGVAPNPVRN  247 (315)
T ss_pred             cceeEEEEEEeEEEecCCcc--hhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHHHHHHhcCCCCceecccCCCccch
Confidence            25899999999999976433  1233344577778888899999999999999999999999998899888 58999999


Q ss_pred             HHHHHHHHHhCCC---CCCC
Q 030406          160 GEVVEILAKFFPE---YPIP  176 (178)
Q Consensus       160 ~e~~~~i~~~~~~---~~~p  176 (178)
                      .|+++.+.+.+..   +|+|
T Consensus       248 ~Ef~q~lg~aL~Rp~~~pvP  267 (315)
T KOG3019|consen  248 GEFCQQLGSALSRPSWLPVP  267 (315)
T ss_pred             HHHHHHHHHHhCCCcccCCc
Confidence            9999999998854   4454

>PRK12320 hypothetical protein; Provisional

Probab=99.45  E-value=1.6e-12  Score=105.57  Aligned_cols=128  Identities=20%  Similarity=0.181  Sum_probs=89.5

Q ss_pred             hhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcC
Q 030406            3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG   82 (178)
Q Consensus         3 ~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~   82 (178)
                      ++|+.++.|++++|++.++ ++||+||.   +|.+         +              .|.    .+|.++.    .++
T Consensus        77 ~vNv~Gt~nLleAA~~~Gv-RiV~~SS~---~G~~---------~--------------~~~----~aE~ll~----~~~  121 (699)
T PRK12320         77 GVGITGLAHVANAAARAGA-RLLFVSQA---AGRP---------E--------------LYR----QAETLVS----TGW  121 (699)
T ss_pred             hHHHHHHHHHHHHHHHcCC-eEEEEECC---CCCC---------c--------------ccc----HHHHHHH----hcC
Confidence            4799999999999999997 69999983   2211         0              011    3566654    346


Q ss_pred             CcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecCccCHHH
Q 030406           83 VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLC-AESVLHRGE  161 (178)
Q Consensus        83 ~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~~~s~~e  161 (178)
                      ++++++|++++||++........+..+.+...      .++...++|++|++++++.+++.+. .+.||+ +++.+|++|
T Consensus       122 ~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~------~~~pI~vIyVdDvv~alv~al~~~~-~GiyNIG~~~~~Si~e  194 (699)
T PRK12320        122 APSLVIRIAPPVGRQLDWMVCRTVATLLRSKV------SARPIRVLHLDDLVRFLVLALNTDR-NGVVDLATPDTTNVVT  194 (699)
T ss_pred             CCEEEEeCceecCCCCcccHhHHHHHHHHHHH------cCCceEEEEHHHHHHHHHHHHhCCC-CCEEEEeCCCeeEHHH
Confidence            89999999999998644321222332222111      1234456999999999999998753 458986 668899999


Q ss_pred             HHHHHHHhCCC
Q 030406          162 VVEILAKFFPE  172 (178)
Q Consensus       162 ~~~~i~~~~~~  172 (178)
                      +++.++...|.
T Consensus       195 l~~~i~~~~p~  205 (699)
T PRK12320        195 AWRLLRSVDPH  205 (699)
T ss_pred             HHHHHHHhCCC
Confidence            99999887553

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.43  E-value=1.2e-12  Score=100.92  Aligned_cols=172  Identities=20%  Similarity=0.229  Sum_probs=110.9

Q ss_pred             chhHHHHHHHHHHHHHhC-CCCEEEEeccccccccCCCCCCCCccCC------------CCCCchh------hh--cccC
Q 030406            2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAVYMDPNRSPDDVVDE------------SCWSDLE------FC--KNTK   60 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E------------~~~~~~~------~~--~~~~   60 (178)
                      ..+|..||+++++.|++. +.+-++|+||. .+-.........++.+            +.+.+.+      ..  ....
T Consensus       127 l~iNt~Gt~~~l~lak~~~~l~~~vhVSTA-y~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~P  205 (467)
T KOG1221|consen  127 LGINTRGTRNVLQLAKEMVKLKALVHVSTA-YSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWP  205 (467)
T ss_pred             hhhhhHhHHHHHHHHHHhhhhheEEEeehh-heecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCC
Confidence            357999999999999997 58999999993 3222211100000111            1111111      11  1457


Q ss_pred             chHHHHHHHHHHHHHHHHHhcCCcEEEecCCceeCCCCCCC------ChhhHHHHHHHHhCCccc---cCCCCcccccHH
Q 030406           61 NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQST------VNASIIHILKYLNGSAKT---YANSVQAYVHVR  131 (178)
Q Consensus        61 ~~Y~~sK~~~E~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~  131 (178)
                      +.|..+|..+|.++.++.  .++|++|+||+.|.+....+.      .+.....+....+|....   ..+...|+|.+|
T Consensus       206 NTYtfTKal~E~~i~~~~--~~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD  283 (467)
T KOG1221|consen  206 NTYTFTKALAEMVIQKEA--ENLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVD  283 (467)
T ss_pred             CceeehHhhHHHHHHhhc--cCCCeEEEcCCceeccccCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHH
Confidence            899999999999999864  479999999999987653331      111111122223333322   146789999999


Q ss_pred             HHHHHHHHhhcC--CCC----CCcEEEe---cCccCHHHHHHHHHHhCCCCCCC
Q 030406          132 DVALAHILVYET--PSA----SGRYLCA---ESVLHRGEVVEILAKFFPEYPIP  176 (178)
Q Consensus       132 D~a~~~~~~~~~--~~~----~~~~~~~---~~~~s~~e~~~~i~~~~~~~~~p  176 (178)
                      .++.+++.+...  ...    ..+|+++   ..++++.++.+...+.+.+.|+.
T Consensus       284 ~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~~~Pl~  337 (467)
T KOG1221|consen  284 MVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYFEKIPLE  337 (467)
T ss_pred             HHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHhcccCCcc
Confidence            999999876621  111    2388863   25899999999999999776643

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.41  E-value=4.4e-12  Score=93.94  Aligned_cols=130  Identities=16%  Similarity=0.172  Sum_probs=88.0

Q ss_pred             HHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcCCcE
Q 030406            6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGVDL   85 (178)
Q Consensus         6 v~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~   85 (178)
                      ...+++++++|+++|++|||++||. ..+..    .                 +      .+...|+.+++   ..|+++
T Consensus        82 ~~~~~~~i~aa~~~gv~~~V~~Ss~-~~~~~----~-----------------~------~~~~~~~~l~~---~~gi~~  130 (285)
T TIGR03649        82 APPMIKFIDFARSKGVRRFVLLSAS-IIEKG----G-----------------P------AMGQVHAHLDS---LGGVEY  130 (285)
T ss_pred             hHHHHHHHHHHHHcCCCEEEEeecc-ccCCC----C-----------------c------hHHHHHHHHHh---ccCCCE
Confidence            3567899999999999999999984 32210    0                 0      11223443332   248999


Q ss_pred             EEecCCceeCCCCCCCChhhHHHHHHHHh-CCcc-ccCCCCcccccHHHHHHHHHHhhcCCCC-CCcEEE-ecCccCHHH
Q 030406           86 VVVNPVLVLGPLLQSTVNASIIHILKYLN-GSAK-TYANSVQAYVHVRDVALAHILVYETPSA-SGRYLC-AESVLHRGE  161 (178)
Q Consensus        86 ~i~R~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~~~-~~~~~s~~e  161 (178)
                      +++||+++++......   ..   ..... +... ..|++.++|+|++|++++++.++..+.. ++.|++ +++.+|++|
T Consensus       131 tilRp~~f~~~~~~~~---~~---~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~e  204 (285)
T TIGR03649       131 TVLRPTWFMENFSEEF---HV---EAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDD  204 (285)
T ss_pred             EEEeccHHhhhhcccc---cc---cccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHH
Confidence            9999999886431110   00   11111 2111 2367889999999999999999988754 447764 678999999


Q ss_pred             HHHHHHHhCCC
Q 030406          162 VVEILAKFFPE  172 (178)
Q Consensus       162 ~~~~i~~~~~~  172 (178)
                      +++.+.+.+++
T Consensus       205 ia~~l~~~~g~  215 (285)
T TIGR03649       205 VAEILSRVLGR  215 (285)
T ss_pred             HHHHHHHHhCC
Confidence            99999998853

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.40  E-value=6.3e-12  Score=91.51  Aligned_cols=140  Identities=17%  Similarity=0.107  Sum_probs=94.3

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|..++.++++++++.++++||++||+ ++|+.....+   ..+..     ...++...|..+|..+|++++    +.
T Consensus       105 ~~~n~~~~~~ll~a~~~~~~~~iV~iSS~-~v~g~~~~~~---~~~~~-----~~~~~~~~~~~~k~~~e~~l~----~~  171 (251)
T PLN00141        105 WKVDNFGTVNLVEACRKAGVTRFILVSSI-LVNGAAMGQI---LNPAY-----IFLNLFGLTLVAKLQAEKYIR----KS  171 (251)
T ss_pred             eeeehHHHHHHHHHHHHcCCCEEEEEccc-cccCCCcccc---cCcch-----hHHHHHHHHHHHHHHHHHHHH----hc
Confidence            35688899999999999999999999994 6676432211   11110     011233445567888888765    34


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccc-cCC-CCcccccHHHHHHHHHHhhcCCCCCC-cE-EEe---c
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YAN-SVQAYVHVRDVALAHILVYETPSASG-RY-LCA---E  154 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~-~~-~~~---~  154 (178)
                      |++++++||+++++......               ... .+. ....+|+.+|+|++++.++..+...+ ++ +++   +
T Consensus       172 gi~~~iirpg~~~~~~~~~~---------------~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~  236 (251)
T PLN00141        172 GINYTIVRPGGLTNDPPTGN---------------IVMEPEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADA  236 (251)
T ss_pred             CCcEEEEECCCccCCCCCce---------------EEECCCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCC
Confidence            89999999999997642211               000 111 12357999999999999998877544 45 343   2


Q ss_pred             CccCHHHHHHHHHHh
Q 030406          155 SVLHRGEVVEILAKF  169 (178)
Q Consensus       155 ~~~s~~e~~~~i~~~  169 (178)
                      ...+++++...++++
T Consensus       237 ~~~~~~~~~~~~~~~  251 (251)
T PLN00141        237 PKRSYKDLFASIKQK  251 (251)
T ss_pred             CchhHHHHHHHhhcC
Confidence            347999999988763

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.39  E-value=1.6e-11  Score=90.54  Aligned_cols=142  Identities=18%  Similarity=0.133  Sum_probs=96.4

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++    ++.+.+++|++||.++..+                     ..+.+.|+.+|...|.+++.+
T Consensus       104 ~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~l  162 (276)
T PRK06482        104 IDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA---------------------YPGFSLYHATKWGIEGFVEAV  162 (276)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC---------------------CCCCchhHHHHHHHHHHHHHH
Confidence            468999999999997    5567789999999533211                     124578999999999999887


Q ss_pred             HHh---cCCcEEEecCCce---eCCCCCCCC------hhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC
Q 030406           78 AVA---RGVDLVVVNPVLV---LGPLLQSTV------NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v---~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                      +.+   .|++++++||+.+   ||++.....      ......+.+.+....      ..-+.+++|++++++.++..+.
T Consensus       163 ~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~d~~~~~~a~~~~~~~~~  236 (276)
T PRK06482        163 AQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGS------FAIPGDPQKMVQAMIASADQTP  236 (276)
T ss_pred             HHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhcc------CCCCCCHHHHHHHHHHHHcCCC
Confidence            665   5899999999988   554322110      001111222222211      1124689999999999998776


Q ss_pred             CCCcEEEe-cCccCHHHHHHHHHHhC
Q 030406          146 ASGRYLCA-ESVLHRGEVVEILAKFF  170 (178)
Q Consensus       146 ~~~~~~~~-~~~~s~~e~~~~i~~~~  170 (178)
                      .+..|+++ ++..+..|+++.+.+.+
T Consensus       237 ~~~~~~~g~~~~~~~~~~~~~~~~~~  262 (276)
T PRK06482        237 APRRLTLGSDAYASIRAALSERLAAL  262 (276)
T ss_pred             CCeEEecChHHHHHHHHHHHHHHHHH
Confidence            66688875 55677777777665544

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.25  E-value=6e-11  Score=83.91  Aligned_cols=159  Identities=13%  Similarity=0.046  Sum_probs=114.2

Q ss_pred             hhHHHHHHHHHHHHHhCCC---CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            3 EPAVIGTKNVIVAAAEAKV---RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         3 ~~nv~~t~~ll~~~~~~~~---~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      ++...||.+||+|.+.++.   -||.-.|| +..||.....|   .+|.+      |..|.++|+.+|..+-.++-.|.+
T Consensus       131 eVdavGtLRlLdAi~~c~l~~~VrfYQAst-SElyGkv~e~P---QsE~T------PFyPRSPYa~aKmy~~WivvNyRE  200 (376)
T KOG1372|consen  131 EVDAVGTLRLLDAIRACRLTEKVRFYQAST-SELYGKVQEIP---QSETT------PFYPRSPYAAAKMYGYWIVVNYRE  200 (376)
T ss_pred             eccchhhhhHHHHHHhcCcccceeEEeccc-HhhcccccCCC---cccCC------CCCCCChhHHhhhhheEEEEEhHH
Confidence            3456789999999998642   36888888 89999776666   67887      567999999999999999888888


Q ss_pred             hcCCcEEEecCCceeCCCCCCCC--hhhHHHHHHHHhCCcc--ccC--CCCcccccHHHHHHHHHHhhcCCCCCCcEEEe
Q 030406           80 ARGVDLVVVNPVLVLGPLLQSTV--NASIIHILKYLNGSAK--TYA--NSVQAYVHVRDVALAHILVYETPSASGRYLCA  153 (178)
Q Consensus        80 ~~~~~~~i~R~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~--~~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~  153 (178)
                      .+++-.+---+++--+|++....  ....+.+.+...|...  ..|  +..+||-|+.|-+++++.+++++.+....+..
T Consensus       201 AYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~d~PdDfViAT  280 (376)
T KOG1372|consen  201 AYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQQDSPDDFVIAT  280 (376)
T ss_pred             hhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHhcCCCCceEEec
Confidence            77764444333333344443321  1122223333334332  234  57899999999999999999998777666788


Q ss_pred             cCccCHHHHHHHHHHhCC
Q 030406          154 ESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       154 ~~~~s~~e~~~~i~~~~~  171 (178)
                      ++..|++|+++..-.++.
T Consensus       281 ge~hsVrEF~~~aF~~ig  298 (376)
T KOG1372|consen  281 GEQHSVREFCNLAFAEIG  298 (376)
T ss_pred             CCcccHHHHHHHHHHhhC
Confidence            999999999987766554

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.24  E-value=5.9e-11  Score=82.27  Aligned_cols=109  Identities=32%  Similarity=0.324  Sum_probs=77.5

Q ss_pred             HHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcCCcE
Q 030406            6 VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGVDL   85 (178)
Q Consensus         6 v~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~   85 (178)
                      ...+++++++|++++++++|++|| ..+|.......   ..+..        .....|...|..+|+.++    +.++++
T Consensus        75 ~~~~~~~~~a~~~~~~~~~v~~s~-~~~~~~~~~~~---~~~~~--------~~~~~~~~~~~~~e~~~~----~~~~~~  138 (183)
T PF13460_consen   75 VDAAKNIIEAAKKAGVKRVVYLSS-AGVYRDPPGLF---SDEDK--------PIFPEYARDKREAEEALR----ESGLNW  138 (183)
T ss_dssp             HHHHHHHHHHHHHTTSSEEEEEEE-TTGTTTCTSEE---EGGTC--------GGGHHHHHHHHHHHHHHH----HSTSEE
T ss_pred             ccccccccccccccccccceeeec-cccCCCCCccc---ccccc--------cchhhhHHHHHHHHHHHH----hcCCCE
Confidence            567899999999999999999999 56665332210   11111        122678899999998874    448999


Q ss_pred             EEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           86 VVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        86 ~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      +++||+.+||+.....  ....           ..+....++||.+|+|++++.++++
T Consensus       139 ~ivrp~~~~~~~~~~~--~~~~-----------~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  139 TIVRPGWIYGNPSRSY--RLIK-----------EGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             EEEEESEEEBTTSSSE--EEES-----------STSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             EEEECcEeEeCCCcce--eEEe-----------ccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            9999999999863321  0000           0234667999999999999998863

...

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.21  E-value=1.6e-10  Score=85.20  Aligned_cols=144  Identities=16%  Similarity=0.088  Sum_probs=95.2

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++    ++.+.+++|++||.++..+.                     ...+.|+.+|...+.+.+.+
T Consensus       105 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~---------------------~~~~~Y~~sKaa~~~~~~~l  163 (275)
T PRK08263        105 IDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAF---------------------PMSGIYHASKWALEGMSEAL  163 (275)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCC---------------------CCccHHHHHHHHHHHHHHHH
Confidence            578999988888776    45667899999995443211                     13357999999999988877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCCh--hhHHHHHHHHhCCccccCCCCccc-ccHHHHHHHHHHhhcCCCCCCcEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAKTYANSVQAY-VHVRDVALAHILVYETPSASGRYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-i~v~D~a~~~~~~~~~~~~~~~~~  151 (178)
                      +.+   .|+++.++||+.+..+.......  ...............  ......+ ++++|++++++.+++.+...+.|+
T Consensus       164 a~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~dva~~~~~l~~~~~~~~~~~  241 (275)
T PRK08263        164 AQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAE--QWSERSVDGDPEAAAEALLKLVDAENPPLRLF  241 (275)
T ss_pred             HHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHH--HHHhccCCCCHHHHHHHHHHHHcCCCCCeEEE
Confidence            654   68999999999887654321100  000000110000000  0112334 889999999999999887777776


Q ss_pred             Ee--cCccCHHHHHHHHHH
Q 030406          152 CA--ESVLHRGEVVEILAK  168 (178)
Q Consensus       152 ~~--~~~~s~~e~~~~i~~  168 (178)
                      ++  ++.+++.++.+.+.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~  260 (275)
T PRK08263        242 LGSGVLDLAKADYERRLAT  260 (275)
T ss_pred             eCchHHHHHHHHHHHHHHH
Confidence            53  357888888888776

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.16  E-value=3.5e-10  Score=82.59  Aligned_cols=127  Identities=22%  Similarity=0.220  Sum_probs=84.8

Q ss_pred             chhHHHH----HHHHHHHH-HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIG----TKNVIVAA-AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~----t~~ll~~~-~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.+    +.++++++ ++.+.+++|++||..+.++                     ..+.+.|+.+|...+.+++.
T Consensus       112 ~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~---------------------~~~~~~y~~sk~a~~~~~~~  170 (262)
T PRK13394        112 QAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEA---------------------SPLKSAYVTAKHGLLGLARV  170 (262)
T ss_pred             HHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCC---------------------CCCCcccHHHHHHHHHHHHH
Confidence            4578888    77778887 6667899999999533221                     12346799999999999887


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhh-------H-HHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNAS-------I-IHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                      ++.+   .++++.++||+.++++.........       . ......+.+     +...++|++++|++++++.++....
T Consensus       171 la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~dva~a~~~l~~~~~  245 (262)
T PRK13394        171 LAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLG-----KTVDGVFTTVEDVAQTVLFLSSFPS  245 (262)
T ss_pred             HHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhc-----CCCCCCCCCHHHHHHHHHHHcCccc
Confidence            7655   4799999999999987532211000       0 001111111     2346789999999999999987653


Q ss_pred             C--CC-cEEEec
Q 030406          146 A--SG-RYLCAE  154 (178)
Q Consensus       146 ~--~~-~~~~~~  154 (178)
                      .  .| .|++++
T Consensus       246 ~~~~g~~~~~~~  257 (262)
T PRK13394        246 AALTGQSFVVSH  257 (262)
T ss_pred             cCCcCCEEeeCC
Confidence            2  24 455654

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.14  E-value=2.2e-09  Score=79.19  Aligned_cols=126  Identities=19%  Similarity=0.145  Sum_probs=82.8

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..+||++||. +.+..                    ..+...|+.+|...|.+++++
T Consensus       115 ~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~-~~~~~--------------------~~~~~~Y~~sK~a~~~l~~~~  173 (274)
T PRK07775        115 VQIHLVGANRLATAVLPGMIERRRGDLIFVGSD-VALRQ--------------------RPHMGAYGAAKAGLEAMVTNL  173 (274)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCceEEEECCh-HhcCC--------------------CCCcchHHHHHHHHHHHHHHH
Confidence            4689999999988875    3345689999994 33311                    013457999999999999988


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHH-HHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASII-HILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLC  152 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~  152 (178)
                      +.+.   |+++.++|||.+.++........... .+......    .+...+.+++++|++++++.+++.+..+..||+
T Consensus       174 ~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~dva~a~~~~~~~~~~~~~~~~  248 (274)
T PRK07775        174 QMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKW----GQARHDYFLRASDLARAITFVAETPRGAHVVNM  248 (274)
T ss_pred             HHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHh----cccccccccCHHHHHHHHHHHhcCCCCCCeeEE
Confidence            7654   89999999998754421111111111 11111110    122356799999999999999987644446665

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.12  E-value=1.3e-09  Score=76.34  Aligned_cols=134  Identities=22%  Similarity=0.233  Sum_probs=94.1

Q ss_pred             hhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcC
Q 030406            3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG   82 (178)
Q Consensus         3 ~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~   82 (178)
                      ++|-....+-..++.+.|+++|+|+|. .. |+-+                  +..+ +.|-.+|+++|..+..   .+.
T Consensus       136 ~ing~ani~a~kaa~~~gv~~fvyISa-~d-~~~~------------------~~i~-rGY~~gKR~AE~Ell~---~~~  191 (283)
T KOG4288|consen  136 RINGTANINAVKAAAKAGVPRFVYISA-HD-FGLP------------------PLIP-RGYIEGKREAEAELLK---KFR  191 (283)
T ss_pred             HhccHhhHHHHHHHHHcCCceEEEEEh-hh-cCCC------------------Cccc-hhhhccchHHHHHHHH---hcC
Confidence            567777788889999999999999987 22 2211                  1123 3799999999999876   446


Q ss_pred             CcEEEecCCceeCCCCCCCChhhHH-------HHHHHH---hCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEE
Q 030406           83 VDLVVVNPVLVLGPLLQSTVNASII-------HILKYL---NGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLC  152 (178)
Q Consensus        83 ~~~~i~R~~~v~G~~~~~~~~~~~~-------~~~~~~---~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~  152 (178)
                      +.-+|+|||.+||.+.-......+.       ...+.+   ..+.+..+......+.++++|.+.+.+++.++-.|    
T Consensus       192 ~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f~G----  267 (283)
T KOG4288|consen  192 FRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDFKG----  267 (283)
T ss_pred             CCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCcCc----
Confidence            8899999999999865443332222       222222   12235567888999999999999999999886554    


Q ss_pred             ecCccCHHHHHHHHH
Q 030406          153 AESVLHRGEVVEILA  167 (178)
Q Consensus       153 ~~~~~s~~e~~~~i~  167 (178)
                         .+++.|+.+...
T Consensus       268 ---vv~i~eI~~~a~  279 (283)
T KOG4288|consen  268 ---VVTIEEIKKAAH  279 (283)
T ss_pred             ---eeeHHHHHHHHH
Confidence               345555555443

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.11  E-value=8.9e-10  Score=81.34  Aligned_cols=133  Identities=18%  Similarity=0.148  Sum_probs=86.5

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++.    +.+.+++|++||.++..+.                     .+.+.|+.+|...|.+++.+
T Consensus       106 ~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  164 (277)
T PRK06180        106 FEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM---------------------PGIGYYCGSKFALEGISESL  164 (277)
T ss_pred             HHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC---------------------CCcchhHHHHHHHHHHHHHH
Confidence            5789999999999854    4456799999996443211                     24567999999999998887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCCh---hhHH---HHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVN---ASII---HILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG  148 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~  148 (178)
                      +.+   .|++++++||+.+.++.......   ....   .........  ........+..++|++++++.+++.+....
T Consensus       165 a~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~dva~~~~~~l~~~~~~~  242 (277)
T PRK06180        165 AKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQA--REAKSGKQPGDPAKAAQAILAAVESDEPPL  242 (277)
T ss_pred             HHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHH--HHhhccCCCCCHHHHHHHHHHHHcCCCCCe
Confidence            654   48999999999997653211100   0011   001000000  000122345679999999999999887666


Q ss_pred             cEEEecCcc
Q 030406          149 RYLCAESVL  157 (178)
Q Consensus       149 ~~~~~~~~~  157 (178)
                      .|.++.+..
T Consensus       243 ~~~~g~~~~  251 (277)
T PRK06180        243 HLLLGSDAL  251 (277)
T ss_pred             eEeccHHHH
Confidence            777665443

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.11  E-value=7.6e-10  Score=81.72  Aligned_cols=133  Identities=17%  Similarity=0.120  Sum_probs=87.6

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++    ++.+..++|++||.++.++.                     .+.+.|+.+|...+.+++++
T Consensus       109 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~---------------------~~~~~Y~~sK~~~~~~~~~l  167 (280)
T PRK06914        109 FETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGF---------------------PGLSPYVSSKYALEGFSESL  167 (280)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCC---------------------CCCchhHHhHHHHHHHHHHH
Confidence            468999988888885    55667899999996454431                     24467999999999998877


Q ss_pred             H---HhcCCcEEEecCCceeCCCCCCCCh---------hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC
Q 030406           78 A---VARGVDLVVVNPVLVLGPLLQSTVN---------ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        78 ~---~~~~~~~~i~R~~~v~G~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                      +   ...|++++++|||.+.++.......         .........+.+   ........+++++|+|++++.+++++.
T Consensus       168 ~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~dva~~~~~~~~~~~  244 (280)
T PRK06914        168 RLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQK---HINSGSDTFGNPIDVANLIVEIAESKR  244 (280)
T ss_pred             HHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHH---HHhhhhhccCCHHHHHHHHHHHHcCCC
Confidence            5   4568999999999997763211000         000001110000   001223567899999999999999887


Q ss_pred             CCCcEEEe-cCccC
Q 030406          146 ASGRYLCA-ESVLH  158 (178)
Q Consensus       146 ~~~~~~~~-~~~~s  158 (178)
                      ....|+++ +..++
T Consensus       245 ~~~~~~~~~~~~~~  258 (280)
T PRK06914        245 PKLRYPIGKGVKLM  258 (280)
T ss_pred             CCcccccCCchHHH
Confidence            66667765 34433

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.09  E-value=4.4e-09  Score=75.97  Aligned_cols=122  Identities=16%  Similarity=0.098  Sum_probs=83.5

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++    ++.+.+++|++||..+.++.                     .....|+.+|...+.+++.+
T Consensus       112 ~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~---------------------~~~~~y~~sK~~~~~~~~~~  170 (249)
T PRK12825        112 IDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGW---------------------PGRSNYAAAKAGLVGLTKAL  170 (249)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCC---------------------CCchHHHHHHHHHHHHHHHH
Confidence            467899999998887    45678899999995443221                     23467999999999998876


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+   .+++++++||+.++|+........   .....    .+  ......+++.+|+++++..++....  ..| .|+
T Consensus       171 ~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~---~~~~~----~~--~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~  241 (249)
T PRK12825        171 ARELAEYGITVNMVAPGDIDTDMKEATIEE---AREAK----DA--ETPLGRSGTPEDIARAVAFLCSDASDYITGQVIE  241 (249)
T ss_pred             HHHHhhcCeEEEEEEECCccCCccccccch---hHHhh----hc--cCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEE
Confidence            554   589999999999999764332111   11110    00  1112238999999999999997653  234 666


Q ss_pred             Ee
Q 030406          152 CA  153 (178)
Q Consensus       152 ~~  153 (178)
                      +.
T Consensus       242 i~  243 (249)
T PRK12825        242 VT  243 (249)
T ss_pred             eC
Confidence            54

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.09  E-value=3.4e-09  Score=77.02  Aligned_cols=125  Identities=16%  Similarity=0.164  Sum_probs=83.0

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      ++.|+.++..+++++    ++.+++++|++||.++..+.                     .....|+.+|...+.+++.+
T Consensus       106 ~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~---------------------~~~~~y~~sk~a~~~~~~~~  164 (255)
T TIGR01963       106 IAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVAS---------------------PFKSAYVAAKHGLIGLTKVL  164 (255)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCC---------------------CCCchhHHHHHHHHHHHHHH
Confidence            357888888877776    55678899999995333211                     12356999999999998876


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCc----------cccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA----------KTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   .+++++++||+.++++.....       +........          ...+...+++++++|++++++.++..+
T Consensus       165 ~~~~~~~~i~v~~i~pg~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~  237 (255)
T TIGR01963       165 ALEVAAHGITVNAICPGYVRTPLVEKQ-------IADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDA  237 (255)
T ss_pred             HHHhhhcCeEEEEEecCccccHHHHHH-------HHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCcc
Confidence            554   389999999999988742110       000000000          011345678999999999999999764


Q ss_pred             C--CCC-cEEEec
Q 030406          145 S--ASG-RYLCAE  154 (178)
Q Consensus       145 ~--~~~-~~~~~~  154 (178)
                      .  ..+ .|++++
T Consensus       238 ~~~~~g~~~~~~~  250 (255)
T TIGR01963       238 AAGITGQAIVLDG  250 (255)
T ss_pred             ccCccceEEEEcC
Confidence            2  234 567754

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.02  E-value=2.1e-09  Score=78.21  Aligned_cols=127  Identities=15%  Similarity=0.132  Sum_probs=81.0

Q ss_pred             chhHHHH----HHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIG----TKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~----t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.+    +..++.++++.+.++||++||..+.++.                     .+.+.|+.+|...+.+.+.+
T Consensus       109 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~---------------------~~~~~y~~~k~a~~~~~~~l  167 (258)
T PRK12429        109 IAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGS---------------------AGKAAYVSAKHGLIGLTKVV  167 (258)
T ss_pred             HhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCC---------------------CCcchhHHHHHHHHHHHHHH
Confidence            4568888    4555555556678899999996444321                     24567999999999888776


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhh--------HHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNAS--------IIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA  146 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  146 (178)
                      +.+   .++.+.++||+.+.++.........        .........     .....+.|++++|+++++..++.....
T Consensus       168 ~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~d~a~~~~~l~~~~~~  242 (258)
T PRK12429        168 ALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLL-----PLVPQKRFTTVEEIADYALFLASFAAK  242 (258)
T ss_pred             HHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHh-----ccCCccccCCHHHHHHHHHHHcCcccc
Confidence            554   4789999999999887532210000        000000000     112356799999999999999876432


Q ss_pred             --CC-cEEEec
Q 030406          147 --SG-RYLCAE  154 (178)
Q Consensus       147 --~~-~~~~~~  154 (178)
                        .+ .|++++
T Consensus       243 ~~~g~~~~~~~  253 (258)
T PRK12429        243 GVTGQAWVVDG  253 (258)
T ss_pred             CccCCeEEeCC
Confidence              34 556654

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.01  E-value=1.2e-08  Score=74.30  Aligned_cols=140  Identities=16%  Similarity=0.077  Sum_probs=92.8

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..++|++||..+ .. .       .             ....|+.+|...+.+++.+
T Consensus       105 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~-~~-~-------~-------------~~~~y~~sK~a~~~~~~~~  162 (257)
T PRK07074        105 NALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNG-MA-A-------L-------------GHPAYSAAKAGLIHYTKLL  162 (257)
T ss_pred             HHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhh-cC-C-------C-------------CCcccHHHHHHHHHHHHHH
Confidence            3578899888888874    355678999999422 11 0       0             1235999999999999988


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCcE-E
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGRY-L  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~-~  151 (178)
                      +.+.   |+++..+||+.+.++....... ....+......     ....++|++++|++++++.++...  ...|.+ +
T Consensus       163 a~~~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~  236 (257)
T PRK07074        163 AVEYGRFGIRANAVAPGTVKTQAWEARVA-ANPQVFEELKK-----WYPLQDFATPDDVANAVLFLASPAARAITGVCLP  236 (257)
T ss_pred             HHHHhHhCeEEEEEEeCcCCcchhhcccc-cChHHHHHHHh-----cCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEE
Confidence            7654   6899999999998764221100 01111111111     123468999999999999999653  234544 4


Q ss_pred             E-ecCccCHHHHHHHHHHh
Q 030406          152 C-AESVLHRGEVVEILAKF  169 (178)
Q Consensus       152 ~-~~~~~s~~e~~~~i~~~  169 (178)
                      + ++...+.+|+++.+.+.
T Consensus       237 ~~~g~~~~~~~~~~~~~~~  255 (257)
T PRK07074        237 VDGGLTAGNREMARTLTLE  255 (257)
T ss_pred             eCCCcCcCChhhhhhhccc
Confidence            5 45677899999887653

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.00  E-value=1.2e-08  Score=73.85  Aligned_cols=124  Identities=12%  Similarity=0.040  Sum_probs=83.6

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..++|++||..+.++.                     .+...|+.+|...+.+++.+
T Consensus       112 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  170 (247)
T PRK12935        112 IDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG---------------------FGQTNYSAAKAGMLGFTKSL  170 (247)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC---------------------CCCcchHHHHHHHHHHHHHH
Confidence            57899999999999874    345689999995444321                     13467999999999888776


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCCcEEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASGRYLC  152 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~  152 (178)
                      ..+   .++++++++|+.+.++.....   ..........+      ...+.+++++|++++++.+++...  .+..|++
T Consensus       171 ~~~~~~~~i~v~~v~pg~v~t~~~~~~---~~~~~~~~~~~------~~~~~~~~~edva~~~~~~~~~~~~~~g~~~~i  241 (247)
T PRK12935        171 ALELAKTNVTVNAICPGFIDTEMVAEV---PEEVRQKIVAK------IPKKRFGQADEIAKGVVYLCRDGAYITGQQLNI  241 (247)
T ss_pred             HHHHHHcCcEEEEEEeCCCcChhhhhc---cHHHHHHHHHh------CCCCCCcCHHHHHHHHHHHcCcccCccCCEEEe
Confidence            654   389999999999865432111   00111111111      234678999999999999887542  2447776


Q ss_pred             ecC
Q 030406          153 AES  155 (178)
Q Consensus       153 ~~~  155 (178)
                      ++.
T Consensus       242 ~~g  244 (247)
T PRK12935        242 NGG  244 (247)
T ss_pred             CCC
Confidence            554

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.00  E-value=4.1e-09  Score=76.41  Aligned_cols=133  Identities=17%  Similarity=0.137  Sum_probs=83.8

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++.+.  ...++|++||..+.+..        ..+..        ...+.|+.+|...|.+++.++.
T Consensus       106 ~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~--------~~~~~--------~~~~~Y~~sK~a~e~~~~~l~~  169 (248)
T PRK07806        106 MRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIP--------TVKTM--------PEYEPVARSKRAGEDALRALRP  169 (248)
T ss_pred             eEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCc--------cccCC--------ccccHHHHHHHHHHHHHHHHHH
Confidence            568999999999999864  23589999994332210        01111        1246799999999999988755


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC-cEEEecC
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCAES  155 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~  155 (178)
                      +   .++++.+++|+.+-++...........   ......    ......+++++|++++++.+++.+...| .|++++.
T Consensus       170 ~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~dva~~~~~l~~~~~~~g~~~~i~~~  242 (248)
T PRK07806        170 ELAEKGIGFVVVSGDMIEGTVTATLLNRLNP---GAIEAR----REAAGKLYTVSEFAAEVARAVTAPVPSGHIEYVGGA  242 (248)
T ss_pred             HhhccCeEEEEeCCccccCchhhhhhccCCH---HHHHHH----HhhhcccCCHHHHHHHHHHHhhccccCccEEEecCc
Confidence            4   578899999887755421100000000   000000    0112479999999999999999775555 6777654


Q ss_pred             cc
Q 030406          156 VL  157 (178)
Q Consensus       156 ~~  157 (178)
                      ..
T Consensus       243 ~~  244 (248)
T PRK07806        243 DY  244 (248)
T ss_pred             cc
Confidence            43

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.97  E-value=6.9e-10  Score=79.89  Aligned_cols=139  Identities=27%  Similarity=0.253  Sum_probs=88.8

Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcCCc
Q 030406            5 AVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGVD   84 (178)
Q Consensus         5 nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~   84 (178)
                      .+....++++||+++|+|+||+.|. ...+.           +..      ...|....-..|...|+.+++    .+++
T Consensus        79 ~~~~~~~li~Aa~~agVk~~v~ss~-~~~~~-----------~~~------~~~p~~~~~~~k~~ie~~l~~----~~i~  136 (233)
T PF05368_consen   79 ELEQQKNLIDAAKAAGVKHFVPSSF-GADYD-----------ESS------GSEPEIPHFDQKAEIEEYLRE----SGIP  136 (233)
T ss_dssp             HHHHHHHHHHHHHHHT-SEEEESEE-SSGTT-----------TTT------TSTTHHHHHHHHHHHHHHHHH----CTSE
T ss_pred             hhhhhhhHHHhhhccccceEEEEEe-ccccc-----------ccc------cccccchhhhhhhhhhhhhhh----cccc
Confidence            4567899999999999999997444 33321           110      012334444577888877654    4899


Q ss_pred             EEEecCCceeCCCCCCCChhhHHHHHHHHhCC---ccc--cCCCCcccc-cHHHHHHHHHHhhcCCCCC--C-cEEEecC
Q 030406           85 LVVVNPVLVLGPLLQSTVNASIIHILKYLNGS---AKT--YANSVQAYV-HVRDVALAHILVYETPSAS--G-RYLCAES  155 (178)
Q Consensus        85 ~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~i-~v~D~a~~~~~~~~~~~~~--~-~~~~~~~  155 (178)
                      ++++|++..+.......     .. .......   ...  .++....++ +.+|++++++.++..+...  + .+.+.++
T Consensus       137 ~t~i~~g~f~e~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~~  210 (233)
T PF05368_consen  137 YTIIRPGFFMENLLPPF-----AP-VVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAGE  210 (233)
T ss_dssp             BEEEEE-EEHHHHHTTT-----HH-TTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGGG
T ss_pred             ceeccccchhhhhhhhh-----cc-cccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCCC
Confidence            99999998765321110     00 0011111   111  234456664 9999999999999997654  3 3456778


Q ss_pred             ccCHHHHHHHHHHhCC
Q 030406          156 VLHRGEVVEILAKFFP  171 (178)
Q Consensus       156 ~~s~~e~~~~i~~~~~  171 (178)
                      .+|.+|+++.+.+.++
T Consensus       211 ~~t~~eia~~~s~~~G  226 (233)
T PF05368_consen  211 TLTYNEIAAILSKVLG  226 (233)
T ss_dssp             EEEHHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHC
Confidence            9999999999999874

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK09135 pteridine reductase; Provisional

Probab=98.96  E-value=2.5e-08  Score=72.20  Aligned_cols=124  Identities=17%  Similarity=0.091  Sum_probs=78.3

Q ss_pred             chhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.++++++...   ....++++++.   .            +..      +..+.+.|+.+|..+|.+++.+.
T Consensus       113 ~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~---~------------~~~------~~~~~~~Y~~sK~~~~~~~~~l~  171 (249)
T PRK09135        113 FASNLKAPFFLSQAAAPQLRKQRGAIVNITDI---H------------AER------PLKGYPVYCAAKAALEMLTRSLA  171 (249)
T ss_pred             HHHhchhHHHHHHHHHHHHhhCCeEEEEEeCh---h------------hcC------CCCCchhHHHHHHHHHHHHHHHH
Confidence            568999999999999742   22345555441   1            111      22466789999999999999987


Q ss_pred             Hhc--CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC-CCCC-cEEEec
Q 030406           79 VAR--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP-SASG-RYLCAE  154 (178)
Q Consensus        79 ~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-~~~~-~~~~~~  154 (178)
                      .+.  +++++++||+.++|+..........  ......+..      ...+.+++|+++++..++... ...| .|++++
T Consensus       172 ~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~  243 (249)
T PRK09135        172 LELAPEVRVNAVAPGAILWPEDGNSFDEEA--RQAILARTP------LKRIGTPEDIAEAVRFLLADASFITGQILAVDG  243 (249)
T ss_pred             HHHCCCCeEEEEEeccccCccccccCCHHH--HHHHHhcCC------cCCCcCHHHHHHHHHHHcCccccccCcEEEECC
Confidence            764  5899999999999987433211111  111222221      112235899999996665432 2234 777743

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=98.95  E-value=1.8e-08  Score=73.01  Aligned_cols=127  Identities=20%  Similarity=0.133  Sum_probs=84.3

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+.+++|++||. ..++.                   +......|+.+|...+.+++.+
T Consensus       111 ~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~-~~~~~-------------------~~~~~~~y~~sK~a~~~~~~~~  170 (251)
T PRK12826        111 IDVNLTGTFLLTQAALPALIRAGGGRIVLTSSV-AGPRV-------------------GYPGLAHYAASKAGLVGFTRAL  170 (251)
T ss_pred             HHHhhHHHHHHHHHHHHHHHHcCCcEEEEEech-Hhhcc-------------------CCCCccHHHHHHHHHHHHHHHH
Confidence            5679999999998874    4567899999995 32210                   1124467999999999999887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC--CC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~  151 (178)
                      ..+   .+++++++||+.++|+.........   +........     ....+++++|++++++.++..+..  .| .|+
T Consensus       171 ~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~---~~~~~~~~~-----~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~  242 (251)
T PRK12826        171 ALELAARNITVNSVHPGGVDTPMAGNLGDAQ---WAEAIAAAI-----PLGRLGEPEDIAAAVLFLASDEARYITGQTLP  242 (251)
T ss_pred             HHHHHHcCeEEEEEeeCCCCcchhhhcCchH---HHHHHHhcC-----CCCCCcCHHHHHHHHHHHhCccccCcCCcEEE
Confidence            554   4899999999999998643221111   111111111     112589999999999998866432  34 666


Q ss_pred             EecCc
Q 030406          152 CAESV  156 (178)
Q Consensus       152 ~~~~~  156 (178)
                      +.++.
T Consensus       243 ~~~g~  247 (251)
T PRK12826        243 VDGGA  247 (251)
T ss_pred             ECCCc
Confidence            65543

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=98.91  E-value=3.3e-08  Score=78.87  Aligned_cols=135  Identities=19%  Similarity=0.082  Sum_probs=85.7

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.|+.+++++|++.+++|||++||+++ +...       ..+..       ......|...|..+|+.+.    ..
T Consensus       181 ~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga-~~~g-------~p~~~-------~~sk~~~~~~KraaE~~L~----~s  241 (576)
T PLN03209        181 YRIDYLATKNLVDAATVAKVNHFILVTSLGT-NKVG-------FPAAI-------LNLFWGVLCWKRKAEEALI----AS  241 (576)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEEccchh-cccC-------ccccc-------hhhHHHHHHHHHHHHHHHH----Hc
Confidence            4679999999999999999999999999533 2111       11110       1234568888999998875    35


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccc-cCCC-CcccccHHHHHHHHHHhhcCCC-CCC-cEE-EecCc
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YANS-VQAYVHVRDVALAHILVYETPS-ASG-RYL-CAESV  156 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~i~v~D~a~~~~~~~~~~~-~~~-~~~-~~~~~  156 (178)
                      |++++++|||++.++.......           +.... ..+. ....+..+|+|++++.++..+. ..+ ++- +++..
T Consensus       242 GIrvTIVRPG~L~tp~d~~~~t-----------~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~~~  310 (576)
T PLN03209        242 GLPYTIVRPGGMERPTDAYKET-----------HNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAETT  310 (576)
T ss_pred             CCCEEEEECCeecCCccccccc-----------cceeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEEeCCC
Confidence            8999999999998763221000           00000 1111 1235889999999999998664 333 553 44432


Q ss_pred             ---cCHHHHHHHH
Q 030406          157 ---LHRGEVVEIL  166 (178)
Q Consensus       157 ---~s~~e~~~~i  166 (178)
                         .++.++++.+
T Consensus       311 ~p~~~~~~~~~~i  323 (576)
T PLN03209        311 APLTPMEELLAKI  323 (576)
T ss_pred             CCCCCHHHHHHhc
Confidence               4555555443

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=98.88  E-value=7.1e-08  Score=69.56  Aligned_cols=123  Identities=20%  Similarity=0.173  Sum_probs=83.2

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      ++.|+.++.++++++.    +.+.+++|++||..+.++.                     .+...|+.+|...+.+++.+
T Consensus       110 ~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~---------------------~~~~~y~~sk~~~~~~~~~l  168 (246)
T PRK05653        110 IDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGN---------------------PGQTNYSAAKAGVIGFTKAL  168 (246)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCC---------------------CCCcHhHhHHHHHHHHHHHH
Confidence            4679999999988884    4567899999995443311                     24466999999999998887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC--CC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~  151 (178)
                      +++   .+++++++||+.++++.....    ............     ....+++++|+++++..++.....  .+ .|+
T Consensus       169 ~~~~~~~~i~~~~i~pg~~~~~~~~~~----~~~~~~~~~~~~-----~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~  239 (246)
T PRK05653        169 ALELASRGITVNAVAPGFIDTDMTEGL----PEEVKAEILKEI-----PLGRLGQPEEVANAVAFLASDAASYITGQVIP  239 (246)
T ss_pred             HHHHhhcCeEEEEEEeCCcCCcchhhh----hHHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHcCchhcCccCCEEE
Confidence            654   489999999999988763221    111111111111     235688999999999999875322  34 555


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       240 ~~g  242 (246)
T PRK05653        240 VNG  242 (246)
T ss_pred             eCC
Confidence            544

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.87  E-value=2.6e-08  Score=72.30  Aligned_cols=127  Identities=13%  Similarity=-0.011  Sum_probs=83.1

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++.+.  ...+||++||. +.+.                    +..+.+.|+.+|...|.+++.++.
T Consensus       112 ~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~-~~~~--------------------~~~~~~~Y~~sK~~~~~~~~~l~~  170 (252)
T PRK06077        112 ISTDFKSVIYCSQELAKEMREGGAIVNIASV-AGIR--------------------PAYGLSIYGAMKAAVINLTKYLAL  170 (252)
T ss_pred             HhHhCHHHHHHHHHHHHHhhcCcEEEEEcch-hccC--------------------CCCCchHHHHHHHHHHHHHHHHHH
Confidence            467999999999888853  23589999994 4331                    113557899999999999998877


Q ss_pred             hc--CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC-CCcEEEec
Q 030406           80 AR--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA-SGRYLCAE  154 (178)
Q Consensus        80 ~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~~~~~  154 (178)
                      +.  ++.+.+++|+.+.++...... .............    ......+++++|++++++.+++.+.. +..|++++
T Consensus       171 ~~~~~i~v~~v~Pg~i~t~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~dva~~~~~~~~~~~~~g~~~~i~~  243 (252)
T PRK06077        171 ELAPKIRVNAIAPGFVKTKLGESLF-KVLGMSEKEFAEK----FTLMGKILDPEEVAEFVAAILKIESITGQVFVLDS  243 (252)
T ss_pred             HHhcCCEEEEEeeCCccChHHHhhh-hcccccHHHHHHh----cCcCCCCCCHHHHHHHHHHHhCccccCCCeEEecC
Confidence            65  678889999988765311100 0000000000000    11234689999999999999976654 34777644

>PRK06182 short chain dehydrogenase; Validated

Probab=98.86  E-value=9e-08  Score=70.48  Aligned_cols=128  Identities=16%  Similarity=0.148  Sum_probs=80.7

Q ss_pred             chhHHHHH----HHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGT----KNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t----~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++    +.++..+++.+..++|++||.++..+                     ......|+.+|...+.+.+.+
T Consensus       102 ~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~~sKaa~~~~~~~l  160 (273)
T PRK06182        102 FEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIY---------------------TPLGAWYHATKFALEGFSDAL  160 (273)
T ss_pred             HhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCC---------------------CCCccHhHHHHHHHHHHHHHH
Confidence            46788884    55555666777789999999533211                     012356999999999987655


Q ss_pred             H---HhcCCcEEEecCCceeCCCCCCCCh--------hhHH----HHHHHHhCCccccCCCCcccccHHHHHHHHHHhhc
Q 030406           78 A---VARGVDLVVVNPVLVLGPLLQSTVN--------ASII----HILKYLNGSAKTYANSVQAYVHVRDVALAHILVYE  142 (178)
Q Consensus        78 ~---~~~~~~~~i~R~~~v~G~~~~~~~~--------~~~~----~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  142 (178)
                      +   ...|+++.++||+.+.++.......        ....    .+......     ......+.+++|+|++++.++.
T Consensus       161 ~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~vA~~i~~~~~  235 (273)
T PRK06182        161 RLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRS-----TYGSGRLSDPSVIADAISKAVT  235 (273)
T ss_pred             HHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHH-----hhccccCCCHHHHHHHHHHHHh
Confidence            4   3568999999999997764211000        0000    00001100     0123457799999999999998


Q ss_pred             CCCCCCcEEEecC
Q 030406          143 TPSASGRYLCAES  155 (178)
Q Consensus       143 ~~~~~~~~~~~~~  155 (178)
                      .+.....|+++..
T Consensus       236 ~~~~~~~~~~g~~  248 (273)
T PRK06182        236 ARRPKTRYAVGFG  248 (273)
T ss_pred             CCCCCceeecCcc
Confidence            7655567776543

>PRK05876 short chain dehydrogenase; Provisional

Probab=98.82  E-value=1e-07  Score=70.44  Aligned_cols=143  Identities=19%  Similarity=0.160  Sum_probs=84.2

Q ss_pred             chhHHHHHHHHHHHHH----hCC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++.    +.+ ..++|++||..+..+                     ..+...|+.+|...+.+.+.
T Consensus       111 ~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asK~a~~~~~~~  169 (275)
T PRK05876        111 IDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP---------------------NAGLGAYGVAKYGVVGLAET  169 (275)
T ss_pred             HhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC---------------------CCCCchHHHHHHHHHHHHHH
Confidence            5789999999998875    333 468999999543321                     12456799999974444443


Q ss_pred             HHH---hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhC-Ccccc--CCCCcccccHHHHHHHHHHhhcCCCCCCcE
Q 030406           77 EAV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNG-SAKTY--ANSVQAYVHVRDVALAHILVYETPSASGRY  150 (178)
Q Consensus        77 ~~~---~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~  150 (178)
                      ++.   ..|+.+.+++|+.+.++.....  .... ....... .....  ....+++++++|+|++++.++.++   ..|
T Consensus       170 l~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~---~~~  243 (275)
T PRK05876        170 LAREVTADGIGVSVLCPMVVETNLVANS--ERIR-GAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN---RLY  243 (275)
T ss_pred             HHHHhhhcCcEEEEEEeCccccccccch--hhhc-CccccccccccccccccccccCCCHHHHHHHHHHHHHcC---CeE
Confidence            332   3489999999998866532211  0000 0000000 01111  234578999999999999999764   244


Q ss_pred             EEecCccCHHHH---HHHHHHhCCC
Q 030406          151 LCAESVLHRGEV---VEILAKFFPE  172 (178)
Q Consensus       151 ~~~~~~~s~~e~---~~~i~~~~~~  172 (178)
                      ++. .+....++   ...+...+.+
T Consensus       244 ~~~-~~~~~~~~~~~~~~~~~~~~~  267 (275)
T PRK05876        244 VLP-HAASRASIRRRFERIDRTFDE  267 (275)
T ss_pred             Eec-ChhhHHHHHHHHHHHHHhccc
Confidence            443 23333433   3444444443

>PRK05875 short chain dehydrogenase; Provisional

Probab=98.81  E-value=2.7e-07  Score=67.95  Aligned_cols=140  Identities=20%  Similarity=0.103  Sum_probs=90.8

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.+    .+..+++++||. ..+.                    +..+.+.|+.+|...|.+++.+
T Consensus       115 ~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~-~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~~  173 (276)
T PRK05875        115 VDLNVNGTMYVLKHAARELVRGGGGSFVGISSI-AASN--------------------THRWFGAYGVTKSAVDHLMKLA  173 (276)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCcEEEEEech-hhcC--------------------CCCCCcchHHHHHHHHHHHHHH
Confidence            46799999999887764    334589999994 4321                    0124577999999999999988


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC--CC-cEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SG-RYL  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~  151 (178)
                      +.+.   +++++++||+.+.++....... .-.........      .....+++++|+++++..++..+..  .+ .++
T Consensus       174 ~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~  246 (276)
T PRK05875        174 ADELGPSWVRVNSIRPGLIRTDLVAPITE-SPELSADYRAC------TPLPRVGEVEDVANLAMFLLSDAASWITGQVIN  246 (276)
T ss_pred             HHHhcccCeEEEEEecCccCCcccccccc-CHHHHHHHHcC------CCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEE
Confidence            7654   5889999999886653221100 00011111111      1123467899999999999987643  24 566


Q ss_pred             E-ecCcc----CHHHHHHHHHHh
Q 030406          152 C-AESVL----HRGEVVEILAKF  169 (178)
Q Consensus       152 ~-~~~~~----s~~e~~~~i~~~  169 (178)
                      + ++..+    ++.|+++.+.+.
T Consensus       247 ~~~g~~~~~~~~~~~~~~~~~~~  269 (276)
T PRK05875        247 VDGGHMLRRGPDFSSMLEPVFGA  269 (276)
T ss_pred             ECCCeeccCCccHHHHHHHHhhH
Confidence            6 45444    777777766654

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.81  E-value=1.1e-07  Score=69.13  Aligned_cols=124  Identities=20%  Similarity=0.200  Sum_probs=82.4

Q ss_pred             chhHHHHHHHHHHHHHhC-----C-----CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA-----K-----VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE   71 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-----~-----~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E   71 (178)
                      +++|+.++.++++++.+.     +     ..++|++||..+.++.                     .+.+.|+.+|.+.|
T Consensus       110 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~  168 (256)
T PRK12745        110 LAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS---------------------PNRGEYCISKAGLS  168 (256)
T ss_pred             HHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC---------------------CCCcccHHHHHHHH
Confidence            578999999998887542     1     5679999996444321                     23467999999999


Q ss_pred             HHHHHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--C
Q 030406           72 KAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--A  146 (178)
Q Consensus        72 ~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~  146 (178)
                      .+++.++.+   .|++++++||+.+.++.....    ...+........    .....+.+++|+++++..++....  .
T Consensus       169 ~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~----~~~~~~~~~~~~----~~~~~~~~~~d~a~~i~~l~~~~~~~~  240 (256)
T PRK12745        169 MAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPV----TAKYDALIAKGL----VPMPRWGEPEDVARAVAALASGDLPYS  240 (256)
T ss_pred             HHHHHHHHHHHHhCCEEEEEecCCCcCcccccc----chhHHhhhhhcC----CCcCCCcCHHHHHHHHHHHhCCccccc
Confidence            999887654   689999999999987643221    111111111111    112357799999999998886542  2


Q ss_pred             CC-cEEEec
Q 030406          147 SG-RYLCAE  154 (178)
Q Consensus       147 ~~-~~~~~~  154 (178)
                      .| .|++++
T Consensus       241 ~G~~~~i~g  249 (256)
T PRK12745        241 TGQAIHVDG  249 (256)
T ss_pred             CCCEEEECC
Confidence            33 666654

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.80  E-value=1.6e-07  Score=68.15  Aligned_cols=125  Identities=17%  Similarity=0.106  Sum_probs=81.6

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.+    .+.++||++||+.+..+                     ..+...|+.+|.+.|.+++.+
T Consensus       110 ~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------------------~~~~~~y~~sK~a~~~~~~~~  168 (250)
T PRK08063        110 MNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY---------------------LENYTTVGVSKAALEALTRYL  168 (250)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC---------------------CCCccHHHHHHHHHHHHHHHH
Confidence            46789998888888875    45679999999543321                     124467999999999999887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC--CC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~  151 (178)
                      +.+   .|+++.+++|+.+..+..... .. ...+........     ....+++++|++++++.++..+..  .| .++
T Consensus       169 ~~~~~~~~i~v~~i~pg~v~t~~~~~~-~~-~~~~~~~~~~~~-----~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~  241 (250)
T PRK08063        169 AVELAPKGIAVNAVSGGAVDTDALKHF-PN-REELLEDARAKT-----PAGRMVEPEDVANAVLFLCSPEADMIRGQTII  241 (250)
T ss_pred             HHHHhHhCeEEEeEecCcccCchhhhc-cC-chHHHHHHhcCC-----CCCCCcCHHHHHHHHHHHcCchhcCccCCEEE
Confidence            654   589999999999976542211 00 011111111111     122478999999999999876432  34 555


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       242 ~~g  244 (250)
T PRK08063        242 VDG  244 (250)
T ss_pred             ECC
Confidence            543

>PRK06179 short chain dehydrogenase; Provisional

Probab=98.79  E-value=2e-07  Score=68.51  Aligned_cols=131  Identities=15%  Similarity=0.083  Sum_probs=81.9

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++    ++.+.+++|++||..++.+.                     .....|+.+|...+.+.+.+
T Consensus       101 ~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  159 (270)
T PRK06179        101 FDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPA---------------------PYMALYAASKHAVEGYSESL  159 (270)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCC---------------------CCccHHHHHHHHHHHHHHHH
Confidence            578999988888875    55678899999995443210                     13457999999999998876


Q ss_pred             HH---hcCCcEEEecCCceeCCCCCCCCh--hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEE
Q 030406           78 AV---ARGVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLC  152 (178)
Q Consensus        78 ~~---~~~~~~~i~R~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~  152 (178)
                      ..   +.|+++++++|+.+.++.......  ...........................+|+++.++.++..+.....|..
T Consensus       160 ~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~~~~~~~~  239 (270)
T PRK06179        160 DHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGPWPKMRYTA  239 (270)
T ss_pred             HHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCCCCCeeEec
Confidence            44   358999999999987754221100  0110000000000000001122346789999999999988765556655


Q ss_pred             e
Q 030406          153 A  153 (178)
Q Consensus       153 ~  153 (178)
                      +
T Consensus       240 ~  240 (270)
T PRK06179        240 G  240 (270)
T ss_pred             C
Confidence            4

>PRK12828 short chain dehydrogenase; Provisional

Probab=98.79  E-value=1.1e-07  Score=68.33  Aligned_cols=115  Identities=17%  Similarity=0.114  Sum_probs=79.3

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+.+++|++||..+ +...                    .+...|+.+|...+.+++.+
T Consensus       110 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~-~~~~--------------------~~~~~y~~sk~a~~~~~~~~  168 (239)
T PRK12828        110 YGVNVKTTLNASKAALPALTASGGGRIVNIGAGAA-LKAG--------------------PGMGAYAAAKAGVARLTEAL  168 (239)
T ss_pred             HHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHh-ccCC--------------------CCcchhHHHHHHHHHHHHHH
Confidence            4678999999888875    356889999999533 3110                    23456999999998888766


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +..   .++++.++||+.++++.....                 ........+++++|+++++..++....  ..| .+.
T Consensus       169 a~~~~~~~i~~~~i~pg~v~~~~~~~~-----------------~~~~~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~  231 (239)
T PRK12828        169 AAELLDRGITVNAVLPSIIDTPPNRAD-----------------MPDADFSRWVTPEQIAAVIAFLLSDEAQAITGASIP  231 (239)
T ss_pred             HHHhhhcCeEEEEEecCcccCcchhhc-----------------CCchhhhcCCCHHHHHHHHHHHhCcccccccceEEE
Confidence            543   589999999999987631110                 001112347999999999999997643  234 445


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       232 ~~g  234 (239)
T PRK12828        232 VDG  234 (239)
T ss_pred             ecC
Confidence            543

>PRK12829 short chain dehydrogenase; Provisional

Probab=98.78  E-value=1.8e-07  Score=68.38  Aligned_cols=128  Identities=16%  Similarity=0.105  Sum_probs=79.8

Q ss_pred             chhHHHHHHHHHHHHH----hCCC-CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++.    +.+. ++++++||.++.++.                     .....|+.+|...|.+++.
T Consensus       115 ~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~---------------------~~~~~y~~~K~a~~~~~~~  173 (264)
T PRK12829        115 LAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGY---------------------PGRTPYAASKWAVVGLVKS  173 (264)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCC---------------------CCCchhHHHHHHHHHHHHH
Confidence            5789999999988874    3444 678888874333221                     1234699999999999888


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccc------cCCCCcccccHHHHHHHHHHhhcCC--C
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT------YANSVQAYVHVRDVALAHILVYETP--S  145 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~v~D~a~~~~~~~~~~--~  145 (178)
                      ++.+   .+++++++||+.++|+.....    ..............      .......+++++|+++++..++...  .
T Consensus       174 l~~~~~~~~i~~~~l~pg~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~  249 (264)
T PRK12829        174 LAIELGPLGIRVNAILPGIVRGPRMRRV----IEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLASPAARY  249 (264)
T ss_pred             HHHHHhhcCeEEEEEecCCcCChHHHHH----hhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccC
Confidence            7654   389999999999998753211    11000000000000      0012235899999999998888643  2


Q ss_pred             CCC-cEEEec
Q 030406          146 ASG-RYLCAE  154 (178)
Q Consensus       146 ~~~-~~~~~~  154 (178)
                      ..+ .|++++
T Consensus       250 ~~g~~~~i~~  259 (264)
T PRK12829        250 ITGQAISVDG  259 (264)
T ss_pred             ccCcEEEeCC
Confidence            234 555543

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=98.78  E-value=2.2e-07  Score=67.76  Aligned_cols=128  Identities=11%  Similarity=0.029  Sum_probs=82.2

Q ss_pred             chhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++.+    .+ -.++|++||..+.++.                     .....|+.+|.+.+.+++.
T Consensus       109 ~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~---------------------~~~~~Y~~sKaa~~~l~~~  167 (259)
T PRK12384        109 LQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS---------------------KHNSGYSAAKFGGVGLTQS  167 (259)
T ss_pred             HHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC---------------------CCCchhHHHHHHHHHHHHH
Confidence            47899998877776654    34 3589999995444321                     1335799999999998887


Q ss_pred             HHH---hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCcc-------ccCCCCcccccHHHHHHHHHHhhcCCCC
Q 030406           77 EAV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK-------TYANSVQAYVHVRDVALAHILVYETPSA  146 (178)
Q Consensus        77 ~~~---~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~v~D~a~~~~~~~~~~~~  146 (178)
                      ++.   ..|+++.++|||.++++.....   .+..+.... +...       ..+.....+++++|++++++.++.....
T Consensus       168 la~e~~~~gi~v~~v~pg~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~~  243 (259)
T PRK12384        168 LALDLAEYGITVHSLMLGNLLKSPMFQS---LLPQYAKKL-GIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKAS  243 (259)
T ss_pred             HHHHHHHcCcEEEEEecCCcccchhhhh---hhHHHHHhc-CCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcccc
Confidence            764   4689999999999887643221   111111110 1000       0123456789999999999988765422


Q ss_pred             --CC-cEEEec
Q 030406          147 --SG-RYLCAE  154 (178)
Q Consensus       147 --~~-~~~~~~  154 (178)
                        .| .|++++
T Consensus       244 ~~~G~~~~v~~  254 (259)
T PRK12384        244 YCTGQSINVTG  254 (259)
T ss_pred             cccCceEEEcC
Confidence              33 667654

>PRK08324 short chain dehydrogenase; Validated

Probab=98.77  E-value=1.2e-07  Score=78.35  Aligned_cols=129  Identities=21%  Similarity=0.140  Sum_probs=84.4

Q ss_pred             chhHHHHHHHHHHHHH----hCCC-CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++.    +.+. .+||++||..++++.                     .....|+.+|...+.+++.
T Consensus       526 ~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~  584 (681)
T PRK08324        526 FDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG---------------------PNFGAYGAAKAAELHLVRQ  584 (681)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC---------------------CCcHHHHHHHHHHHHHHHH
Confidence            5789999999977775    3343 689999995444321                     2346799999999999998


Q ss_pred             HHHhc---CCcEEEecCCcee-CCCCCCCChhhHHHHHHHHhCCcc-------ccCCCCcccccHHHHHHHHHHhhc--C
Q 030406           77 EAVAR---GVDLVVVNPVLVL-GPLLQSTVNASIIHILKYLNGSAK-------TYANSVQAYVHVRDVALAHILVYE--T  143 (178)
Q Consensus        77 ~~~~~---~~~~~i~R~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~v~D~a~~~~~~~~--~  143 (178)
                      ++.+.   |+++.+++|+.+| ++......  ... ......+...       ..+...+.+++++|++++++.++.  .
T Consensus       585 la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~--~~~-~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~  661 (681)
T PRK08324        585 LALELGPDGIRVNGVNPDAVVRGSGIWTGE--WIE-ARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASGLL  661 (681)
T ss_pred             HHHHhcccCeEEEEEeCceeecCCccccch--hhh-hhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCccc
Confidence            87654   5899999999998 55432210  000 0000111110       113456789999999999999884  3


Q ss_pred             CCCCC-cEEEec
Q 030406          144 PSASG-RYLCAE  154 (178)
Q Consensus       144 ~~~~~-~~~~~~  154 (178)
                      ....| .+++++
T Consensus       662 ~~~tG~~i~vdg  673 (681)
T PRK08324        662 SKTTGAIITVDG  673 (681)
T ss_pred             cCCcCCEEEECC
Confidence            33444 566643

>PRK07060 short chain dehydrogenase; Provisional

Probab=98.76  E-value=8.6e-08  Score=69.28  Aligned_cols=125  Identities=21%  Similarity=0.203  Sum_probs=82.7

Q ss_pred             chhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++.+.    + ..+||++||..+.++.                     .+...|+.+|...|.+++.
T Consensus       105 ~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~y~~sK~a~~~~~~~  163 (245)
T PRK07060        105 MAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL---------------------PDHLAYCASKAALDAITRV  163 (245)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC---------------------CCCcHhHHHHHHHHHHHHH
Confidence            468999999999888652    2 3689999995444321                     1345799999999999988


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC--CCcE-
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SGRY-  150 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~~-  150 (178)
                      ++.+   .++++..+||+.+.++.......... ...... ..     .....+++++|+++++..++..+..  .|.+ 
T Consensus       164 ~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~-~~~~~~-~~-----~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~  236 (245)
T PRK07060        164 LCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQ-KSGPML-AA-----IPLGRFAEVDDVAAPILFLLSDAASMVSGVSL  236 (245)
T ss_pred             HHHHHhhhCeEEEEEeeCCCCCchhhhhccCHH-HHHHHH-hc-----CCCCCCCCHHHHHHHHHHHcCcccCCccCcEE
Confidence            7654   47999999999998875322111100 001111 11     1234589999999999999976532  3444 


Q ss_pred             EEec
Q 030406          151 LCAE  154 (178)
Q Consensus       151 ~~~~  154 (178)
                      ++.+
T Consensus       237 ~~~~  240 (245)
T PRK07060        237 PVDG  240 (245)
T ss_pred             eECC
Confidence            4543

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=98.76  E-value=7.6e-08  Score=70.18  Aligned_cols=131  Identities=15%  Similarity=0.124  Sum_probs=84.2

Q ss_pred             chhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++...    + -.++|++||....++.                     .+...|+.+|...+.+.+.
T Consensus       108 ~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~  166 (257)
T PRK07067        108 FAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE---------------------ALVSHYCATKAAVISYTQS  166 (257)
T ss_pred             HHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC---------------------CCCchhhhhHHHHHHHHHH
Confidence            578999999999998642    1 2479999995443321                     2456799999999999887


Q ss_pred             HHH---hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCC---ccccCCCCcccccHHHHHHHHHHhhcCCCC---C
Q 030406           77 EAV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS---AKTYANSVQAYVHVRDVALAHILVYETPSA---S  147 (178)
Q Consensus        77 ~~~---~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~  147 (178)
                      ++.   ..|+++.+++|+.++++..... ............+.   ....+.....+++++|+|+++..++..+..   +
T Consensus       167 la~e~~~~gi~v~~i~pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g  245 (257)
T PRK07067        167 AALALIRHGINVNAIAPGVVDTPMWDQV-DALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADADYIVA  245 (257)
T ss_pred             HHHHhcccCeEEEEEeeCcccchhhhhh-hhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCcccccccC
Confidence            765   4689999999999988642211 00000000000000   000112356799999999999999876432   3


Q ss_pred             CcEEEec
Q 030406          148 GRYLCAE  154 (178)
Q Consensus       148 ~~~~~~~  154 (178)
                      ..+++++
T Consensus       246 ~~~~v~g  252 (257)
T PRK07067        246 QTYNVDG  252 (257)
T ss_pred             cEEeecC
Confidence            3666644

>PRK06138 short chain dehydrogenase; Provisional

Probab=98.76  E-value=2.8e-07  Score=66.89  Aligned_cols=118  Identities=16%  Similarity=0.112  Sum_probs=78.6

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++.+++    ++.+.+++|++||.++.++.                     ...+.|+.+|...+.+++.+
T Consensus       109 ~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  167 (252)
T PRK06138        109 MRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGG---------------------RGRAAYVASKGAIASLTRAM  167 (252)
T ss_pred             HhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCC---------------------CCccHHHHHHHHHHHHHHHH
Confidence            568899987766655    45667899999996555431                     13467999999999999988


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChh--hHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNA--SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                      +.+.   +++++++||+.+.++........  ....+.......     .....+++++|++++++.++..+.
T Consensus       168 ~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~d~a~~~~~l~~~~~  235 (252)
T PRK06138        168 ALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRAR-----HPMNRFGTAEEVAQAALFLASDES  235 (252)
T ss_pred             HHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhc-----CCCCCCcCHHHHHHHHHHHcCchh
Confidence            7654   89999999999987642211000  000111111111     112247899999999999998754

>PRK06123 short chain dehydrogenase; Provisional

Probab=98.75  E-value=1.8e-07  Score=67.80  Aligned_cols=125  Identities=15%  Similarity=0.096  Sum_probs=80.2

Q ss_pred             chhHHHHHHHHHHHHHhC------C-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA------K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAA   74 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~------~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~   74 (178)
                      +++|+.++.++++++.+.      + -.++|++||.++.++.+                    .....|+.+|...|.++
T Consensus       109 ~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--------------------~~~~~Y~~sKaa~~~~~  168 (248)
T PRK06123        109 FATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP--------------------GEYIDYAASKGAIDTMT  168 (248)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC--------------------CCccchHHHHHHHHHHH
Confidence            578999999988887652      1 13699999965555321                    01135999999999998


Q ss_pred             HHHHHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-
Q 030406           75 WEEAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-  148 (178)
Q Consensus        75 ~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-  148 (178)
                      +.++.+.   |+++.++||+.++++.......   ........+..+     ..-+.+++|++++++.++....  ..| 
T Consensus       169 ~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~---~~~~~~~~~~~p-----~~~~~~~~d~a~~~~~l~~~~~~~~~g~  240 (248)
T PRK06123        169 IGLAKEVAAEGIRVNAVRPGVIYTEIHASGGE---PGRVDRVKAGIP-----MGRGGTAEEVARAILWLLSDEASYTTGT  240 (248)
T ss_pred             HHHHHHhcccCeEEEEEecCcccCchhhccCC---HHHHHHHHhcCC-----CCCCcCHHHHHHHHHHHhCccccCccCC
Confidence            8876654   8999999999999874322111   111121222211     1112478999999999887542  233 


Q ss_pred             cEEEec
Q 030406          149 RYLCAE  154 (178)
Q Consensus       149 ~~~~~~  154 (178)
                      .|++.+
T Consensus       241 ~~~~~g  246 (248)
T PRK06123        241 FIDVSG  246 (248)
T ss_pred             EEeecC
Confidence            555543

>PRK05993 short chain dehydrogenase; Provisional

Probab=98.74  E-value=5.8e-07  Score=66.39  Aligned_cols=141  Identities=14%  Similarity=0.181  Sum_probs=85.8

Q ss_pred             chhHHHH----HHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIG----TKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~----t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|    +++++..+++.+..++|++||..+..+                     ..+...|+.+|...|.+.+.+
T Consensus       104 ~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asK~a~~~~~~~l  162 (277)
T PRK05993        104 FEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVP---------------------MKYRGAYNASKFAIEGLSLTL  162 (277)
T ss_pred             HhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCC---------------------CCccchHHHHHHHHHHHHHHH
Confidence            5688888    667777777777889999999533211                     124467999999999998775


Q ss_pred             H---HhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCC--------------ccccCCCCcccccHHHHHHHHHHh
Q 030406           78 A---VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS--------------AKTYANSVQAYVHVRDVALAHILV  140 (178)
Q Consensus        78 ~---~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~i~v~D~a~~~~~~  140 (178)
                      .   ...|+++.+++||.+-.+-...    ....+.......              ...........+..+++++.++.+
T Consensus       163 ~~el~~~gi~v~~v~Pg~v~T~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~a  238 (277)
T PRK05993        163 RMELQGSGIHVSLIEPGPIETRFRAN----ALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLHA  238 (277)
T ss_pred             HHHhhhhCCEEEEEecCCccCchhhH----HHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHHH
Confidence            4   4568999999999885432111    000000000000              000000111246799999999999


Q ss_pred             hcCCCCCCcEEEecCccCHHHHHHHHHHhCC
Q 030406          141 YETPSASGRYLCAESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       141 ~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~  171 (178)
                      ++.+.....|.++..    ..+...+.+.+|
T Consensus       239 ~~~~~~~~~~~~~~~----~~~~~~~~~~~p  265 (277)
T PRK05993        239 LTAPRPRPHYRVTTP----AKQGALLKRLLP  265 (277)
T ss_pred             HcCCCCCCeeeeCch----hHHHHHHHHHCC
Confidence            988765555654321    234445555555

>PRK12746 short chain dehydrogenase; Provisional

Probab=98.74  E-value=3.2e-07  Score=66.73  Aligned_cols=125  Identities=15%  Similarity=0.088  Sum_probs=82.1

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++.+.  +..++|++||. ..+..                    ..+...|+.+|...|.+.+.++.
T Consensus       118 ~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~-~~~~~--------------------~~~~~~Y~~sK~a~~~~~~~~~~  176 (254)
T PRK12746        118 MAVNIKAPFFLIQQTLPLLRAEGRVINISSA-EVRLG--------------------FTGSIAYGLSKGALNTMTLPLAK  176 (254)
T ss_pred             HHHHhHHHHHHHHHHHHHhhcCCEEEEECCH-HhcCC--------------------CCCCcchHhhHHHHHHHHHHHHH
Confidence            468999999999998763  34689999994 43311                    12345799999999999887765


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC---CCCcEEEe
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS---ASGRYLCA  153 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~  153 (178)
                      +   .++++++++|+.+.++-.......  ..+.......     .....+++++|+++++..++..+.   .+..|+++
T Consensus       177 ~~~~~~i~v~~v~pg~~~t~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~  249 (254)
T PRK12746        177 HLGERGITVNTIMPGYTKTDINAKLLDD--PEIRNFATNS-----SVFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVS  249 (254)
T ss_pred             HHhhcCcEEEEEEECCccCcchhhhccC--hhHHHHHHhc-----CCcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeC
Confidence            4   579999999999987642211000  0011111111     122356789999999998887643   23466665


Q ss_pred             c
Q 030406          154 E  154 (178)
Q Consensus       154 ~  154 (178)
                      +
T Consensus       250 ~  250 (254)
T PRK12746        250 G  250 (254)
T ss_pred             C
Confidence            4

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=98.73  E-value=6.2e-07  Score=65.45  Aligned_cols=125  Identities=15%  Similarity=0.059  Sum_probs=76.9

Q ss_pred             chhHHHHHHHHH----HHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVI----VAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll----~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..++    ..+++.+..++|++||. +.++.                      +...|+.+|...+.+.+.+
T Consensus       113 ~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~-~~~~~----------------------~~~~Y~~sK~a~~~~~~~l  169 (260)
T PRK12823        113 IRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSI-ATRGI----------------------NRVPYSAAKGGVNALTASL  169 (260)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCc-cccCC----------------------CCCccHHHHHHHHHHHHHH
Confidence            456777776554    44445566789999994 43310                      1245999999999999988


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCC--------C-ChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQS--------T-VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                      +.+.   |+++..++|+.++++....        . .......+........     ...-+.+++|+++++..++....
T Consensus       170 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~dva~~~~~l~s~~~  244 (260)
T PRK12823        170 AFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSS-----LMKRYGTIDEQVAAILFLASDEA  244 (260)
T ss_pred             HHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccC-----CcccCCCHHHHHHHHHHHcCccc
Confidence            7665   8999999999999863110        0 0011111111111111     11234579999999999886542


Q ss_pred             --CCC-cEEEec
Q 030406          146 --ASG-RYLCAE  154 (178)
Q Consensus       146 --~~~-~~~~~~  154 (178)
                        ..| .+++++
T Consensus       245 ~~~~g~~~~v~g  256 (260)
T PRK12823        245 SYITGTVLPVGG  256 (260)
T ss_pred             ccccCcEEeecC
Confidence              233 556644

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=98.73  E-value=4.5e-07  Score=65.17  Aligned_cols=123  Identities=15%  Similarity=0.132  Sum_probs=80.7

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.+    .+.+++|++||.+++++.+                     ....|+.+|...+.+.+.+
T Consensus       104 ~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~---------------------~~~~y~~~k~a~~~~~~~l  162 (239)
T TIGR01830       104 IDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA---------------------GQANYAASKAGVIGFTKSL  162 (239)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC---------------------CCchhHHHHHHHHHHHHHH
Confidence            56899999999998875    4567999999965665421                     2356999999999887776


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      ..+   .|+.+.++||+.+.++..... .   ....+...+..+     ..-+.+++|++++++.++....  ..+ .|+
T Consensus       163 ~~~~~~~g~~~~~i~pg~~~~~~~~~~-~---~~~~~~~~~~~~-----~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~  233 (239)
T TIGR01830       163 AKELASRNITVNAVAPGFIDTDMTDKL-S---EKVKKKILSQIP-----LGRFGTPEEVANAVAFLASDEASYITGQVIH  233 (239)
T ss_pred             HHHHhhcCeEEEEEEECCCCChhhhhc-C---hHHHHHHHhcCC-----cCCCcCHHHHHHHHHHHhCcccCCcCCCEEE
Confidence            554   589999999998855421111 1   111112222211     2236689999999998885532  234 556


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +++
T Consensus       234 ~~~  236 (239)
T TIGR01830       234 VDG  236 (239)
T ss_pred             eCC
Confidence            654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08017 oxidoreductase; Provisional

Probab=98.73  E-value=3.6e-07  Score=66.51  Aligned_cols=137  Identities=15%  Similarity=0.161  Sum_probs=84.4

Q ss_pred             chhHHHHHHHH----HHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNV----IVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~l----l~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++    ++++++.+.+++|++||..+..+                     ....+.|+.+|...|.+.+.+
T Consensus       102 ~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~---------------------~~~~~~Y~~sK~~~~~~~~~l  160 (256)
T PRK08017        102 FSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIS---------------------TPGRGAYAASKYALEAWSDAL  160 (256)
T ss_pred             HHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccC---------------------CCCccHHHHHHHHHHHHHHHH
Confidence            46788887765    66666777789999999533221                     123467999999999987643


Q ss_pred             ---HHhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccc--cCCCCcccccHHHHHHHHHHhhcCCCCCCcEEE
Q 030406           78 ---AVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT--YANSVQAYVHVRDVALAHILVYETPSASGRYLC  152 (178)
Q Consensus        78 ---~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~  152 (178)
                         ....+++++++|||.+..+....        +... ....+.  .+...+.+++++|+++++..+++.+.....+-.
T Consensus       161 ~~~~~~~~i~v~~v~pg~~~t~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~  231 (256)
T PRK08017        161 RMELRHSGIKVSLIEPGPIRTRFTDN--------VNQT-QSDKPVENPGIAARFTLGPEAVVPKLRHALESPKPKLRYPV  231 (256)
T ss_pred             HHHHhhcCCEEEEEeCCCcccchhhc--------ccch-hhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCCCceeec
Confidence               34568999999998775432110        0000 001111  122345689999999999999987755423211


Q ss_pred             ecCccCHHHHHHHHHHhCCC
Q 030406          153 AESVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       153 ~~~~~s~~e~~~~i~~~~~~  172 (178)
                      +    -+..+...+.+.+|+
T Consensus       232 ~----~~~~~~~~~~~~~p~  247 (256)
T PRK08017        232 T----LVTHAVMVLKRLLPG  247 (256)
T ss_pred             C----cchHHHHHHHHHCCH
Confidence            1    122455566666653

>PRK07774 short chain dehydrogenase; Provisional

Probab=98.71  E-value=5.9e-07  Score=65.11  Aligned_cols=121  Identities=12%  Similarity=0.106  Sum_probs=81.4

Q ss_pred             chhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++...    +.+++|++||. +.+.                       +.+.|+.+|.+.|.+++.+
T Consensus       114 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~-~~~~-----------------------~~~~Y~~sK~a~~~~~~~l  169 (250)
T PRK07774        114 MSVNLDGALVCTRAVYKHMAKRGGGAIVNQSST-AAWL-----------------------YSNFYGLAKVGLNGLTQQL  169 (250)
T ss_pred             HhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecc-cccC-----------------------CccccHHHHHHHHHHHHHH
Confidence            568999999999888753    45799999994 4331                       3357999999999999988


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +++.   ++.+++++||.+..+.........  ......++.+      ..-+.+++|++++++.++....  ..+ .|+
T Consensus       170 ~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~--~~~~~~~~~~------~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~  241 (250)
T PRK07774        170 ARELGGMNIRVNAIAPGPIDTEATRTVTPKE--FVADMVKGIP------LSRMGTPEDLVGMCLFLLSDEASWITGQIFN  241 (250)
T ss_pred             HHHhCccCeEEEEEecCcccCccccccCCHH--HHHHHHhcCC------CCCCcCHHHHHHHHHHHhChhhhCcCCCEEE
Confidence            7764   789999999988765533211111  1112222221      1124678999999999887642  233 667


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +++
T Consensus       242 v~~  244 (250)
T PRK07774        242 VDG  244 (250)
T ss_pred             ECC
Confidence            643

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=98.71  E-value=3.3e-07  Score=66.73  Aligned_cols=125  Identities=14%  Similarity=0.132  Sum_probs=82.4

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.+    .+.+++|++||.....+                     ....+.|+.+|...+.+.+.+
T Consensus       115 ~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~---------------------~~~~~~y~~sK~a~~~~~~~~  173 (255)
T PRK07523        115 LRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALA---------------------RPGIAPYTATKGAVGNLTKGM  173 (255)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccC---------------------CCCCccHHHHHHHHHHHHHHH
Confidence            46899999999998875    35679999999532211                     124467999999999998887


Q ss_pred             HH---hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC--CC-cEE
Q 030406           78 AV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SG-RYL  151 (178)
Q Consensus        78 ~~---~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~  151 (178)
                      +.   ..|+++.++||+.+.++........  ..+........     ....+..++|+|++++.++..+..  .| .++
T Consensus       174 a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~  246 (255)
T PRK07523        174 ATDWAKHGLQCNAIAPGYFDTPLNAALVAD--PEFSAWLEKRT-----PAGRWGKVEELVGACVFLASDASSFVNGHVLY  246 (255)
T ss_pred             HHHhhHhCeEEEEEEECcccCchhhhhccC--HHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHcCchhcCccCcEEE
Confidence            65   4589999999999987642211000  11112222221     123467899999999999875432  34 555


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       247 ~~g  249 (255)
T PRK07523        247 VDG  249 (255)
T ss_pred             ECC
Confidence            533

>PRK12827 short chain dehydrogenase; Provisional

Probab=98.70  E-value=6.9e-07  Score=64.62  Aligned_cols=111  Identities=21%  Similarity=0.169  Sum_probs=77.5

Q ss_pred             chhHHHHHHHHHHHHH-----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA-----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~-----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++.     +.+.+++|++||..++++.                     .+...|+.+|...+.+++.
T Consensus       115 ~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~y~~sK~a~~~~~~~  173 (249)
T PRK12827        115 IDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN---------------------RGQVNYAASKAGLIGLTKT  173 (249)
T ss_pred             HHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC---------------------CCCchhHHHHHHHHHHHHH
Confidence            4689999999999998     4566899999996454321                     2345799999999998887


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      ++.+   .+++++++||+.+.++......  ..    .......     ....+.+.+|+++++..++...
T Consensus       174 l~~~~~~~~i~~~~i~pg~v~t~~~~~~~--~~----~~~~~~~-----~~~~~~~~~~va~~~~~l~~~~  233 (249)
T PRK12827        174 LANELAPRGITVNAVAPGAINTPMADNAA--PT----EHLLNPV-----PVQRLGEPDEVAALVAFLVSDA  233 (249)
T ss_pred             HHHHhhhhCcEEEEEEECCcCCCcccccc--hH----HHHHhhC-----CCcCCcCHHHHHHHHHHHcCcc
Confidence            7654   3899999999999987533211  11    1111111     1122457899999999888653

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=98.68  E-value=7.7e-07  Score=64.49  Aligned_cols=127  Identities=15%  Similarity=0.083  Sum_probs=80.8

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+.+++|++||.++.++.                     .....|+.+|.+.+.+.+.+
T Consensus       108 ~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  166 (250)
T TIGR03206       108 IAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGS---------------------SGEAVYAACKGGLVAFSKTM  166 (250)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCC---------------------CCCchHHHHHHHHHHHHHHH
Confidence            5789999999888775    4567899999995443221                     12356999999999998887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCCh--hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC--CC-c
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SG-R  149 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~  149 (178)
                      +.+.   ++++.++||+.++++.......  .....+........     ....+...+|+|+++..++..+..  .| .
T Consensus       167 a~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~dva~~~~~l~~~~~~~~~g~~  241 (250)
T TIGR03206       167 AREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAI-----PLGRLGQPDDLPGAILFFSSDDASFITGQV  241 (250)
T ss_pred             HHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcC-----CccCCcCHHHHHHHHHHHcCcccCCCcCcE
Confidence            7664   8999999999998764221100  00011111111111     112355689999999998876432  34 4


Q ss_pred             EEEec
Q 030406          150 YLCAE  154 (178)
Q Consensus       150 ~~~~~  154 (178)
                      +.+.+
T Consensus       242 ~~~~~  246 (250)
T TIGR03206       242 LSVSG  246 (250)
T ss_pred             EEeCC
Confidence            44543

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=98.65  E-value=1e-06  Score=63.60  Aligned_cols=123  Identities=15%  Similarity=0.143  Sum_probs=78.9

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+.+++|++||..+.++.                     .....|+.+|...+.+++.+
T Consensus       111 ~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~---------------------~~~~~y~~sk~a~~~~~~~~  169 (248)
T PRK05557        111 IDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGN---------------------PGQANYAASKAGVIGFTKSL  169 (248)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCC---------------------CCCchhHHHHHHHHHHHHHH
Confidence            45799999999988874    356789999996555432                     12456999999999887766


Q ss_pred             HH---hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC--CCCCC-cEE
Q 030406           78 AV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET--PSASG-RYL  151 (178)
Q Consensus        78 ~~---~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~~-~~~  151 (178)
                      +.   ..++.+++++|+.+.++.....    ...+........     ....+.+++|+++++..++..  ....+ .++
T Consensus       170 a~~~~~~~i~~~~v~pg~~~~~~~~~~----~~~~~~~~~~~~-----~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~  240 (248)
T PRK05557        170 ARELASRGITVNAVAPGFIETDMTDAL----PEDVKEAILAQI-----PLGRLGQPEEIASAVAFLASDEAAYITGQTLH  240 (248)
T ss_pred             HHHhhhhCeEEEEEecCccCCcccccc----ChHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHcCcccCCccccEEE
Confidence            54   3478999999998754332111    111111111111     123467999999999888765  22334 555


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       241 i~~  243 (248)
T PRK05557        241 VNG  243 (248)
T ss_pred             ecC
Confidence            543

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=98.65  E-value=5.7e-07  Score=65.00  Aligned_cols=115  Identities=15%  Similarity=0.084  Sum_probs=73.7

Q ss_pred             chhHHHHHHHHHHHHHhC-------CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA-------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAA   74 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-------~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~   74 (178)
                      +++|+.++.++++++...       +..+||++||..++++.+                    .....|+.+|...|.++
T Consensus       108 ~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~--------------------~~~~~Y~~sK~~~~~~~  167 (247)
T PRK09730        108 LSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAP--------------------GEYVDYAASKGAIDTLT  167 (247)
T ss_pred             HhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCC--------------------CcccchHhHHHHHHHHH
Confidence            568999988877766542       135699999965544311                    11235999999999988


Q ss_pred             HHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           75 WEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        75 ~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.++.+   .+++++++||+.++++........  ....... +..+.     .-..+++|+++++..++..+
T Consensus       168 ~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~--~~~~~~~-~~~~~-----~~~~~~~dva~~~~~~~~~~  232 (247)
T PRK09730        168 TGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEP--GRVDRVK-SNIPM-----QRGGQPEEVAQAIVWLLSDK  232 (247)
T ss_pred             HHHHHHHHHhCeEEEEEEeCCCcCcccccCCCH--HHHHHHH-hcCCC-----CCCcCHHHHHHHHHhhcChh
Confidence            766543   489999999999999853322111  1111221 11111     11237899999999888754

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.59  E-value=1.1e-06  Score=63.65  Aligned_cols=127  Identities=15%  Similarity=0.086  Sum_probs=79.3

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++.+.    +.+.++||++||..+.++                     ..+...|+.+|...+.+++.+
T Consensus       110 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------------~~~~~~y~~sk~~~~~~~~~~  168 (251)
T PRK07231        110 FAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRP---------------------RPGLGWYNASKGAVITLTKAL  168 (251)
T ss_pred             HhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCC---------------------CCCchHHHHHHHHHHHHHHHH
Confidence            4678888777776665    356789999999544321                     124467999999999988877


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCCcE-E
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASGRY-L  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~-~  151 (178)
                      +.+.   ++++..++|+.+-++...................     ......+++++|++++++.++..+.  ..|.+ .
T Consensus       169 a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~  243 (251)
T PRK07231        169 AAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLA-----TIPLGRLGTPEDIANAALFLASDEASWITGVTLV  243 (251)
T ss_pred             HHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhc-----CCCCCCCcCHHHHHHHHHHHhCccccCCCCCeEE
Confidence            6543   7899999999885543211100000001111111     1123457899999999999997543  23544 4


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       244 ~~g  246 (251)
T PRK07231        244 VDG  246 (251)
T ss_pred             ECC
Confidence            543

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=98.59  E-value=7.3e-07  Score=64.73  Aligned_cols=117  Identities=15%  Similarity=0.033  Sum_probs=78.2

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..++|++||....+                     +..+.+.|+.+|...+.+++.+
T Consensus       104 ~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~---------------------~~~~~~~Y~~sK~a~~~~~~~l  162 (252)
T PRK08220        104 FAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV---------------------PRIGMAAYGASKAALTSLAKCV  162 (252)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc---------------------CCCCCchhHHHHHHHHHHHHHH
Confidence            57899999999988753    3456899999943321                     1124577999999999999887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChh------hHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNA------SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   .++++.+++|+.+.++........      .........+.     ......+++++|++++++.++...
T Consensus       163 a~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~dva~~~~~l~~~~  233 (252)
T PRK08220        163 GLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKL-----GIPLGKIARPQEIANAVLFLASDL  233 (252)
T ss_pred             HHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhh-----cCCCcccCCHHHHHHHHHHHhcch
Confidence            765   689999999999988742211000      00000011111     122346899999999999988654

>PRK09186 flagellin modification protein A; Provisional

Probab=98.59  E-value=2.3e-06  Score=62.26  Aligned_cols=129  Identities=13%  Similarity=0.029  Sum_probs=78.4

Q ss_pred             chhHHHHHHHHHHH----HHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVA----AAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..++++    +++.+.+++|++||.++.++...  +   ..+..      +......|+.+|...+.+.+.+
T Consensus       114 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--~---~~~~~------~~~~~~~Y~~sK~a~~~l~~~l  182 (256)
T PRK09186        114 LSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF--E---IYEGT------SMTSPVEYAAIKAGIIHLTKYL  182 (256)
T ss_pred             HHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc--h---hcccc------ccCCcchhHHHHHHHHHHHHHH
Confidence            35677666555544    44556779999999655443211  1   22222      1123347999999999998766


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC--CCcE-E
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SGRY-L  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~~-~  151 (178)
                      +.+   .++++.+++|+.++++..     ..   +........     ....+++++|++++++.++.....  .|.+ .
T Consensus       183 a~e~~~~~i~v~~i~Pg~~~~~~~-----~~---~~~~~~~~~-----~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~  249 (256)
T PRK09186        183 AKYFKDSNIRVNCVSPGGILDNQP-----EA---FLNAYKKCC-----NGKGMLDPDDICGTLVFLLSDQSKYITGQNII  249 (256)
T ss_pred             HHHhCcCCeEEEEEecccccCCCC-----HH---HHHHHHhcC-----CccCCCCHHHhhhhHhheeccccccccCceEE
Confidence            654   579999999998875421     11   111111111     123578999999999999976532  3544 4


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       250 ~~~  252 (256)
T PRK09186        250 VDD  252 (256)
T ss_pred             ecC
Confidence            443

>PRK06500 short chain dehydrogenase; Provisional

Probab=98.59  E-value=1.3e-06  Score=63.19  Aligned_cols=117  Identities=18%  Similarity=0.136  Sum_probs=77.0

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...  ...++|++||..+.++.                     ...+.|+.+|...|.+++.++.
T Consensus       108 ~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~la~  166 (249)
T PRK06500        108 FNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGM---------------------PNSSVYAASKAALLSLAKTLSG  166 (249)
T ss_pred             HHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCC---------------------CCccHHHHHHHHHHHHHHHHHH
Confidence            578999999999999752  23578888875555431                     1346799999999999987765


Q ss_pred             hc---CCcEEEecCCceeCCCCCC--CChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           80 AR---GVDLVVVNPVLVLGPLLQS--TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        80 ~~---~~~~~i~R~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.   |+++.++||+.++++....  ........+.+......+     ..-+..++|+++++..++..+
T Consensus       167 e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~va~~~~~l~~~~  231 (249)
T PRK06500        167 ELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVP-----LGRFGTPEEIAKAVLYLASDE  231 (249)
T ss_pred             HhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCC-----CCCCcCHHHHHHHHHHHcCcc
Confidence            43   8999999999998863211  001111112222221111     112458999999999988653

>PRK08628 short chain dehydrogenase; Provisional

Probab=98.58  E-value=1e-06  Score=64.23  Aligned_cols=136  Identities=17%  Similarity=0.134  Sum_probs=84.9

Q ss_pred             chhHHHHHHHHHHHHHh---CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE---AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.++.+++.+   .+..++|++||..++++.                     .+...|+.+|...|.+++.++
T Consensus       110 ~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l~  168 (258)
T PRK08628        110 LERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQ---------------------GGTSGYAAAKGAQLALTREWA  168 (258)
T ss_pred             HhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCC---------------------CCCchhHHHHHHHHHHHHHHH
Confidence            46789999888888753   234689999996554321                     234679999999999999876


Q ss_pred             H---hcCCcEEEecCCceeCCCCCCCCh--hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cE
Q 030406           79 V---ARGVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY  150 (178)
Q Consensus        79 ~---~~~~~~~i~R~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~  150 (178)
                      .   ..++++..++||.++++.......  ..............    .....++.++|++++++.++...  ...| .+
T Consensus       169 ~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~  244 (258)
T PRK08628        169 VALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKI----PLGHRMTTAEEIADTAVFLLSERSSHTTGQWL  244 (258)
T ss_pred             HHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcC----CccccCCCHHHHHHHHHHHhChhhccccCceE
Confidence            4   358999999999998864211000  00000111111111    11124678999999999998764  2344 44


Q ss_pred             EEecCccCHHHH
Q 030406          151 LCAESVLHRGEV  162 (178)
Q Consensus       151 ~~~~~~~s~~e~  162 (178)
                      .+.+....+++.
T Consensus       245 ~~~gg~~~~~~~  256 (258)
T PRK08628        245 FVDGGYVHLDRA  256 (258)
T ss_pred             EecCCccccccc
Confidence            555545554443

>PRK06128 oxidoreductase; Provisional

Probab=98.58  E-value=3.2e-06  Score=63.18  Aligned_cols=125  Identities=18%  Similarity=0.087  Sum_probs=82.2

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...  .-.++|++||..++.+.                     .....|+.+|.+.+.+++.++.
T Consensus       163 ~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~la~  221 (300)
T PRK06128        163 FKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPS---------------------PTLLDYASTKAAIVAFTKALAK  221 (300)
T ss_pred             HHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCC---------------------CCchhHHHHHHHHHHHHHHHHH
Confidence            678999999999999753  23589999995332210                     1335699999999999988776


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC--CC-cEEEe
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SG-RYLCA  153 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~  153 (178)
                      +   .|+++.+++||.+.++...... .....+.. .....     ....+.+.+|++.+++.++.....  .| .++++
T Consensus       222 el~~~gI~v~~v~PG~i~t~~~~~~~-~~~~~~~~-~~~~~-----p~~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~  294 (300)
T PRK06128        222 QVAEKGIRVNAVAPGPVWTPLQPSGG-QPPEKIPD-FGSET-----PMKRPGQPVEMAPLYVLLASQESSYVTGEVFGVT  294 (300)
T ss_pred             HhhhcCcEEEEEEECcCcCCCcccCC-CCHHHHHH-HhcCC-----CCCCCcCHHHHHHHHHHHhCccccCccCcEEeeC
Confidence            5   4899999999999887532210 01111111 11111     123467899999999988875432  34 55664


Q ss_pred             c
Q 030406          154 E  154 (178)
Q Consensus       154 ~  154 (178)
                      +
T Consensus       295 g  295 (300)
T PRK06128        295 G  295 (300)
T ss_pred             C
Confidence            4

>PRK06181 short chain dehydrogenase; Provisional

Probab=98.57  E-value=9.8e-07  Score=64.53  Aligned_cols=113  Identities=17%  Similarity=0.126  Sum_probs=76.4

Q ss_pred             chhHHHHHHHHHHHHHh---CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE---AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.++++.+..   .+..++|++||..++.+                     ..+...|+.+|...|.+.+.++
T Consensus       107 ~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~---------------------~~~~~~Y~~sK~~~~~~~~~l~  165 (263)
T PRK06181        107 MRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTG---------------------VPTRSGYAASKHALHGFFDSLR  165 (263)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCC---------------------CCCccHHHHHHHHHHHHHHHHH
Confidence            57899999999999863   23578999999533321                     1234679999999999987654


Q ss_pred             H---hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCcc-ccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           79 V---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK-TYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        79 ~---~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      .   ..++++.+++|+.+..+......        . ..+... ..+.+...+++++|+++++..+++.+
T Consensus       166 ~~~~~~~i~~~~i~pg~v~t~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        166 IELADDGVAVTVVCPGFVATDIRKRAL--------D-GDGKPLGKSPMQESKIMSAEECAEAILPAIARR  226 (263)
T ss_pred             HHhhhcCceEEEEecCccccCcchhhc--------c-ccccccccccccccCCCCHHHHHHHHHHHhhCC
Confidence            3   35899999999998654321100        0 001111 11223347899999999999999753

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.55  E-value=2.1e-06  Score=61.83  Aligned_cols=106  Identities=10%  Similarity=0.039  Sum_probs=75.2

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+.+++|++||..++++.                     .+...|+.+|.+.+.+++.+
T Consensus       112 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~~  170 (239)
T PRK07666        112 IQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGA---------------------AVTSAYSASKFGVLGLTESL  170 (239)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCC---------------------CCCcchHHHHHHHHHHHHHH
Confidence            57899999888888763    456789999996444321                     23456999999999998776


Q ss_pred             HH---hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~---~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.   +.|+++.++||+.+.++.....         . ...      .....++..+|+++++..++..+
T Consensus       171 a~e~~~~gi~v~~v~pg~v~t~~~~~~---------~-~~~------~~~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        171 MQEVRKHNIRVTALTPSTVATDMAVDL---------G-LTD------GNPDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             HHHhhccCcEEEEEecCcccCcchhhc---------c-ccc------cCCCCCCCHHHHHHHHHHHHhCC
Confidence            54   3589999999999876532110         0 000      11234678999999999999875

>PRK07041 short chain dehydrogenase; Provisional

Probab=98.55  E-value=2.2e-06  Score=61.37  Aligned_cols=127  Identities=20%  Similarity=0.112  Sum_probs=79.4

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++....+..++|++||.++..+                     ..+.+.|+.+|...+.+.+.++.+.
T Consensus        97 ~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~la~e~  155 (230)
T PRK07041         97 MDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRP---------------------SASGVLQGAINAALEALARGLALEL  155 (230)
T ss_pred             HHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCC---------------------CCcchHHHHHHHHHHHHHHHHHHHh
Confidence            5789999999999666556689999999533221                     1245679999999999998876654


Q ss_pred             -CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC-cEEEec
Q 030406           82 -GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCAE  154 (178)
Q Consensus        82 -~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~  154 (178)
                       ++++..++|+.+-.+............+........+     ...+...+|+++++..++..+...| .|++.+
T Consensus       156 ~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~g  225 (230)
T PRK07041        156 APVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLP-----ARRVGQPEDVANAILFLAANGFTTGSTVLVDG  225 (230)
T ss_pred             hCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCC-----CCCCcCHHHHHHHHHHHhcCCCcCCcEEEeCC
Confidence             5678888888775432111000000111111111111     1124568999999999998764444 666643

>PRK06701 short chain dehydrogenase; Provisional

Probab=98.54  E-value=3.1e-06  Score=62.99  Aligned_cols=124  Identities=16%  Similarity=0.124  Sum_probs=82.1

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++.+.  ...++|++||.++..+.                     .....|+.+|...+.+++.++.
T Consensus       153 ~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~l~~~la~  211 (290)
T PRK06701        153 FKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGN---------------------ETLIDYSATKGAIHAFTRSLAQ  211 (290)
T ss_pred             HhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCC---------------------CCcchhHHHHHHHHHHHHHHHH
Confidence            578999999999998753  23589999995332211                     1224699999999999998877


Q ss_pred             hc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEEEe
Q 030406           80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLCA  153 (178)
Q Consensus        80 ~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~  153 (178)
                      +.   |+++..++||.+..+.......  ...+.....      ......+.+++|++++++.++....  ..| .+++.
T Consensus       212 ~~~~~gIrv~~i~pG~v~T~~~~~~~~--~~~~~~~~~------~~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~id  283 (290)
T PRK06701        212 SLVQKGIRVNAVAPGPIWTPLIPSDFD--EEKVSQFGS------NTPMQRPGQPEELAPAYVFLASPDSSYITGQMLHVN  283 (290)
T ss_pred             HhhhcCeEEEEEecCCCCCcccccccC--HHHHHHHHh------cCCcCCCcCHHHHHHHHHHHcCcccCCccCcEEEeC
Confidence            64   8999999999998764322110  011111111      1123457899999999999887643  234 44554


Q ss_pred             c
Q 030406          154 E  154 (178)
Q Consensus       154 ~  154 (178)
                      +
T Consensus       284 g  284 (290)
T PRK06701        284 G  284 (290)
T ss_pred             C
Confidence            3

>PRK09134 short chain dehydrogenase; Provisional

Probab=98.51  E-value=5.3e-06  Score=60.55  Aligned_cols=126  Identities=17%  Similarity=0.045  Sum_probs=81.0

Q ss_pred             chhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.+.    +..++|+++|. ..+.     +               ......|+.+|...|.+.+.+
T Consensus       115 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~-~~~~-----~---------------~p~~~~Y~~sK~a~~~~~~~l  173 (258)
T PRK09134        115 MATNLRAPFVLAQAFARALPADARGLVVNMIDQ-RVWN-----L---------------NPDFLSYTLSKAALWTATRTL  173 (258)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCceEEEECch-hhcC-----C---------------CCCchHHHHHHHHHHHHHHHH
Confidence            578999999999988753    24578888773 3221     0               012247999999999999988


Q ss_pred             HHhc--CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC-cEEEe-
Q 030406           78 AVAR--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCA-  153 (178)
Q Consensus        78 ~~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~-  153 (178)
                      +.+.  ++.+..++||.+......     ....+.....+..      .....+++|++++++.+++.+...+ .+++. 
T Consensus       174 a~~~~~~i~v~~i~PG~v~t~~~~-----~~~~~~~~~~~~~------~~~~~~~~d~a~~~~~~~~~~~~~g~~~~i~g  242 (258)
T PRK09134        174 AQALAPRIRVNAIGPGPTLPSGRQ-----SPEDFARQHAATP------LGRGSTPEEIAAAVRYLLDAPSVTGQMIAVDG  242 (258)
T ss_pred             HHHhcCCcEEEEeecccccCCccc-----ChHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhcCCCcCCCEEEECC
Confidence            7654  378889999988654311     1111222222111      1124779999999999998776666 44554 


Q ss_pred             cCccCH
Q 030406          154 ESVLHR  159 (178)
Q Consensus       154 ~~~~s~  159 (178)
                      +..+++
T Consensus       243 g~~~~~  248 (258)
T PRK09134        243 GQHLAW  248 (258)
T ss_pred             Ceeccc
Confidence            344444

>PRK08219 short chain dehydrogenase; Provisional

Probab=98.50  E-value=4.4e-06  Score=59.60  Aligned_cols=116  Identities=20%  Similarity=0.154  Sum_probs=72.4

Q ss_pred             chhHHHH----HHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIG----TKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~----t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.+    +.++++++++. .+++|++||. ..+..                    ..+...|+.+|...+.+++.+
T Consensus        99 ~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~-~~~~~--------------------~~~~~~y~~~K~a~~~~~~~~  156 (227)
T PRK08219         99 LEVNVVAPAELTRLLLPALRAA-HGHVVFINSG-AGLRA--------------------NPGWGSYAASKFALRALADAL  156 (227)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcch-HhcCc--------------------CCCCchHHHHHHHHHHHHHHH
Confidence            3567777    45555555554 4689999994 33211                    123457999999999988876


Q ss_pred             HHhc-C-CcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEE
Q 030406           78 AVAR-G-VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLC  152 (178)
Q Consensus        78 ~~~~-~-~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~  152 (178)
                      +... + +++..++|+.+.++....        +... .+..    .....+++++|++++++.+++.+..+..+++
T Consensus       157 ~~~~~~~i~~~~i~pg~~~~~~~~~--------~~~~-~~~~----~~~~~~~~~~dva~~~~~~l~~~~~~~~~~~  220 (227)
T PRK08219        157 REEEPGNVRVTSVHPGRTDTDMQRG--------LVAQ-EGGE----YDPERYLRPETVAKAVRFAVDAPPDAHITEV  220 (227)
T ss_pred             HHHhcCCceEEEEecCCccchHhhh--------hhhh-hccc----cCCCCCCCHHHHHHHHHHHHcCCCCCccceE
Confidence            5542 4 788888888765432110        1110 0110    1235689999999999999988755446654

>PRK07890 short chain dehydrogenase; Provisional

Probab=98.50  E-value=1.8e-06  Score=62.85  Aligned_cols=116  Identities=18%  Similarity=0.176  Sum_probs=76.8

Q ss_pred             chhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++..+++++.+.   ...++|++||.....+                     ..+...|+.+|...+.+++.++
T Consensus       111 ~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~---------------------~~~~~~Y~~sK~a~~~l~~~~a  169 (258)
T PRK07890        111 IELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHS---------------------QPKYGAYKMAKGALLAASQSLA  169 (258)
T ss_pred             HHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccC---------------------CCCcchhHHHHHHHHHHHHHHH
Confidence            578999999999998752   2358999999533221                     1244679999999999999877


Q ss_pred             Hh---cCCcEEEecCCceeCCCCCCCCh-------hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           79 VA---RGVDLVVVNPVLVLGPLLQSTVN-------ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        79 ~~---~~~~~~i~R~~~v~G~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      .+   .++++.++||+.++++.......       .....+.......     .....+.+++|++++++.++..
T Consensus       170 ~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~dva~a~~~l~~~  239 (258)
T PRK07890        170 TELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAAN-----SDLKRLPTDDEVASAVLFLASD  239 (258)
T ss_pred             HHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhc-----CCccccCCHHHHHHHHHHHcCH
Confidence            54   48999999999999875221100       0001111111111     1123467899999999988875

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=98.49  E-value=2.8e-06  Score=62.00  Aligned_cols=117  Identities=14%  Similarity=0.107  Sum_probs=76.4

Q ss_pred             chhHHHHHHHHHHHHHhC-----CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA-----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++.+.     +..++|++||....++.+..                 ..+...|+.+|...|.+++.
T Consensus       117 ~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~-----------------~~~~~~Y~~sKa~~~~~~~~  179 (259)
T PRK08213        117 MNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE-----------------VMDTIAYNTSKGAVINFTRA  179 (259)
T ss_pred             HhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc-----------------ccCcchHHHHHHHHHHHHHH
Confidence            568999999999987643     56799999995444432111                 02447899999999999998


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      ++.+   .|+.+.+++|+.+-.+....    ....+.+......     ...-+...+|+++++..++...
T Consensus       180 ~a~~~~~~gi~v~~v~Pg~~~t~~~~~----~~~~~~~~~~~~~-----~~~~~~~~~~va~~~~~l~~~~  241 (259)
T PRK08213        180 LAAEWGPHGIRVNAIAPGFFPTKMTRG----TLERLGEDLLAHT-----PLGRLGDDEDLKGAALLLASDA  241 (259)
T ss_pred             HHHHhcccCEEEEEEecCcCCCcchhh----hhHHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHhCcc
Confidence            8665   37889999998885443211    1111222222111     1123456899999888887654

>PRK07577 short chain dehydrogenase; Provisional

Probab=98.48  E-value=7.9e-06  Score=58.61  Aligned_cols=115  Identities=17%  Similarity=0.105  Sum_probs=72.7

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++.+++    ++.+..++|++||. +.++.                     .....|+.+|...|.+++.+
T Consensus        96 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~-~~~~~---------------------~~~~~Y~~sK~a~~~~~~~~  153 (234)
T PRK07577         96 YDLNVRAAVQVTQAFLEGMKLREQGRIVNICSR-AIFGA---------------------LDRTSYSAAKSALVGCTRTW  153 (234)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccc-cccCC---------------------CCchHHHHHHHHHHHHHHHH
Confidence            467888877776555    44567899999994 44431                     12357999999999998876


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   .|+.++++||+.+..+....................      ....+...+|++++++.++..+
T Consensus       154 a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~a~~~~~l~~~~  217 (234)
T PRK07577        154 ALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASI------PMRRLGTPEEVAAAIAFLLSDD  217 (234)
T ss_pred             HHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcC------CCCCCcCHHHHHHHHHHHhCcc
Confidence            543   489999999999876542111000000001111111      1112457899999999998765

>PLN02253 xanthoxin dehydrogenase

Probab=98.48  E-value=5.1e-06  Score=61.35  Aligned_cols=118  Identities=18%  Similarity=0.114  Sum_probs=75.4

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.+    .+..++|++||.++.++.+                     ....|+.+|...|.+.+.+
T Consensus       124 ~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~l  182 (280)
T PLN02253        124 FDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGL---------------------GPHAYTGSKHAVLGLTRSV  182 (280)
T ss_pred             HhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCC---------------------CCcccHHHHHHHHHHHHHH
Confidence            57899999999988764    2335799998865544311                     2246999999999999987


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChh------hHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNA------SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+.   |+.+..++|+.+..+........      ....+........+    .....++++|+++++..++..+
T Consensus       183 a~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~~dva~~~~~l~s~~  254 (280)
T PLN02253        183 AAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNAN----LKGVELTVDDVANAVLFLASDE  254 (280)
T ss_pred             HHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCC----CcCCCCCHHHHHHHHHhhcCcc
Confidence            7654   78999999999876532110000      00111111111111    1123478999999999988654

>PRK05717 oxidoreductase; Validated

Probab=98.47  E-value=6.9e-06  Score=59.83  Aligned_cols=114  Identities=13%  Similarity=0.017  Sum_probs=76.2

Q ss_pred             chhHHHHHHHHHHHHHh---CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE---AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.++++++..   .+..++|++||..+.++.                     ...+.|+.+|...+.+++.++
T Consensus       114 ~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~---------------------~~~~~Y~~sKaa~~~~~~~la  172 (255)
T PRK05717        114 LAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE---------------------PDTEAYAASKGGLLALTHALA  172 (255)
T ss_pred             HHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC---------------------CCCcchHHHHHHHHHHHHHHH
Confidence            57899999999999964   223689999996444321                     123569999999999999887


Q ss_pred             Hhc--CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           79 VAR--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        79 ~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      .+.  ++++..++|+.+.++.....  . ...+........     ....+.+++|+++++..++...
T Consensus       173 ~~~~~~i~v~~i~Pg~i~t~~~~~~--~-~~~~~~~~~~~~-----~~~~~~~~~~va~~~~~l~~~~  232 (255)
T PRK05717        173 ISLGPEIRVNAVSPGWIDARDPSQR--R-AEPLSEADHAQH-----PAGRVGTVEDVAAMVAWLLSRQ  232 (255)
T ss_pred             HHhcCCCEEEEEecccCcCCccccc--c-chHHHHHHhhcC-----CCCCCcCHHHHHHHHHHHcCch
Confidence            775  47888899999987642211  0 011111111111     1124678999999998888653

>PRK07024 short chain dehydrogenase; Provisional

Probab=98.47  E-value=3.2e-06  Score=61.66  Aligned_cols=103  Identities=17%  Similarity=0.125  Sum_probs=72.9

Q ss_pred             chhHHHHHHHHHH----HHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIV----AAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~----~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++    ++++.+..++|++||.+++++.                     .....|+.+|...+.+.+.+
T Consensus       107 ~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~l  165 (257)
T PRK07024        107 MDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGL---------------------PGAGAYSASKAAAIKYLESL  165 (257)
T ss_pred             HhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC---------------------CCCcchHHHHHHHHHHHHHH
Confidence            5689999888776    5555667899999996554431                     12356999999999998776


Q ss_pred             H---HhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 A---VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~---~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +   +..|++++++||+.+.++.....             .    .  ..-.++..+|+++.++.++...
T Consensus       166 ~~e~~~~gi~v~~v~Pg~v~t~~~~~~-------------~----~--~~~~~~~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        166 RVELRPAGVRVVTIAPGYIRTPMTAHN-------------P----Y--PMPFLMDADRFAARAARAIARG  216 (257)
T ss_pred             HHHhhccCcEEEEEecCCCcCchhhcC-------------C----C--CCCCccCHHHHHHHHHHHHhCC
Confidence            5   44589999999999976531100             0    0  0011367999999999999764

>PRK06196 oxidoreductase; Provisional

Probab=98.46  E-value=5.7e-06  Score=62.30  Aligned_cols=137  Identities=18%  Similarity=0.108  Sum_probs=77.1

Q ss_pred             chhHHHHHHHHHH----HHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIV----AAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~----~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+    .+++.+..++|++||.+...+.        ..+++... ..+..+...|+.||.+.+.+.+.+
T Consensus       125 ~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~--------~~~~~~~~-~~~~~~~~~Y~~SK~a~~~~~~~l  195 (315)
T PRK06196        125 FATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSP--------IRWDDPHF-TRGYDKWLAYGQSKTANALFAVHL  195 (315)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCC--------CCccccCc-cCCCChHHHHHHHHHHHHHHHHHH
Confidence            5688888655554    4555555799999995332211        11111000 012234567999999999998776


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC---CCcEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA---SGRYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~  151 (178)
                      +++   .|+++.+++||.+.++........... ............   ...+..++|.|..++.++..+..   ++.|.
T Consensus       196 a~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~a~~~~~l~~~~~~~~~~g~~~  271 (315)
T PRK06196        196 DKLGKDQGVRAFSVHPGGILTPLQRHLPREEQV-ALGWVDEHGNPI---DPGFKTPAQGAATQVWAATSPQLAGMGGLYC  271 (315)
T ss_pred             HHHhcCCCcEEEEeeCCcccCCccccCChhhhh-hhhhhhhhhhhh---hhhcCCHhHHHHHHHHHhcCCccCCCCCeEe
Confidence            553   489999999999988743221100000 001111000000   00245689999999988865432   44554

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=98.45  E-value=3.8e-06  Score=63.42  Aligned_cols=97  Identities=15%  Similarity=0.022  Sum_probs=60.9

Q ss_pred             chhHHHHHHHHHHHHHh----CC--CCEEEEeccccccccCCCCC-C-CCccCCCCCC------------chhhhcccCc
Q 030406            2 VEPAVIGTKNVIVAAAE----AK--VRRVVFTSSIGAVYMDPNRS-P-DDVVDESCWS------------DLEFCKNTKN   61 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~--~~~~i~~Ss~~~~~~~~~~~-~-~~~~~E~~~~------------~~~~~~~~~~   61 (178)
                      +++|+.|+.++++++..    .+  ..|+|++||....++..... + ....+.++..            ....+..+..
T Consensus       112 ~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (322)
T PRK07453        112 MATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGK  191 (322)
T ss_pred             HhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccchhhhhcchhcccccccccCccCCCccc
Confidence            57899999998888764    22  35999999964443211100 0 0000110000            0001224668


Q ss_pred             hHHHHHHHHHHHHHHHHHhc----CCcEEEecCCceeCCCC
Q 030406           62 WYCYGKAVAEKAAWEEAVAR----GVDLVVVNPVLVLGPLL   98 (178)
Q Consensus        62 ~Y~~sK~~~E~~~~~~~~~~----~~~~~i~R~~~v~G~~~   98 (178)
                      .|+.||++.+.+.+++++++    |+.+..+|||.|++...
T Consensus       192 ~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~  232 (322)
T PRK07453        192 AYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPL  232 (322)
T ss_pred             hhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcc
Confidence            89999999988888777654    79999999999987553

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=98.45  E-value=6.2e-06  Score=59.85  Aligned_cols=114  Identities=18%  Similarity=0.130  Sum_probs=73.4

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+++++    ++.+..++|++||.++..+                     ..+.+.|+.+|...+.+.+.+
T Consensus       103 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------------------~~~~~~Y~~sK~~~~~~~~~l  161 (248)
T PRK10538        103 IDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP---------------------YAGGNVYGATKAFVRQFSLNL  161 (248)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCC---------------------CCCCchhHHHHHHHHHHHHHH
Confidence            567888865555554    4567789999999533211                     124467999999999998887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCC-ChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQST-VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                      +.+   .++.+.+++||.+.|+..... ...........       +  ....++..+|+|++++.++..+.
T Consensus       162 ~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~-------~--~~~~~~~~~dvA~~~~~l~~~~~  224 (248)
T PRK10538        162 RTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKT-------Y--QNTVALTPEDVSEAVWWVATLPA  224 (248)
T ss_pred             HHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhh-------c--cccCCCCHHHHHHHHHHHhcCCC
Confidence            654   368999999999976642210 00000000000       0  12245789999999999987653

>PRK09291 short chain dehydrogenase; Provisional

Probab=98.45  E-value=3.4e-06  Score=61.38  Aligned_cols=119  Identities=18%  Similarity=0.173  Sum_probs=71.6

Q ss_pred             chhHHHHHHHHHH----HHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIV----AAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~----~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++.+    .+++.+.+++|++||..+..+.                     .....|+.+|...|.+.+.+
T Consensus       101 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  159 (257)
T PRK09291        101 FETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG---------------------PFTGAYCASKHALEAIAEAM  159 (257)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC---------------------CCcchhHHHHHHHHHHHHHH
Confidence            4578887766554    4455667899999995433210                     13457999999999988765


Q ss_pred             HH---hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCc---c-ccCCCCcccccHHHHHHHHHHhhcCCC
Q 030406           78 AV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA---K-TYANSVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        78 ~~---~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                      ..   ..|++++++||+.+.-+. ...   ....+..+.....   . ..+....+++..+|+++.++.++..+.
T Consensus       160 ~~~~~~~gi~~~~v~pg~~~t~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  230 (257)
T PRK09291        160 HAELKPFGIQVATVNPGPYLTGF-NDT---MAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVIPADT  230 (257)
T ss_pred             HHHHHhcCcEEEEEecCcccccc-hhh---hhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHhcCCC
Confidence            54   358999999999773221 110   0000111110000   0 001223456789999999999887653

>PRK05650 short chain dehydrogenase; Provisional

Probab=98.44  E-value=4.1e-06  Score=61.56  Aligned_cols=115  Identities=16%  Similarity=0.063  Sum_probs=73.2

Q ss_pred             chhHHHHHHHHHHH----HHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVA----AAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++.++    +++.+..++|++||..++.+                     ......|+.+|...+.+.+.+
T Consensus       105 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~---------------------~~~~~~Y~~sKaa~~~~~~~l  163 (270)
T PRK05650        105 IAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQ---------------------GPAMSSYNVAKAGVVALSETL  163 (270)
T ss_pred             HHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCC---------------------CCCchHHHHHHHHHHHHHHHH
Confidence            45787777665555    45667789999999543321                     123467999999988887776


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   .|+++++++|+.+..+..... .............      .....+++++|+|+.++.+++.+
T Consensus       164 ~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        164 LVELADDEIGVHVVCPSFFQTNLLDSF-RGPNPAMKAQVGK------LLEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             HHHhcccCcEEEEEecCccccCccccc-ccCchhHHHHHHH------HhhcCCCCHHHHHHHHHHHHhCC
Confidence            665   479999999999976542211 0000111111100      01124578999999999999864

>PRK12939 short chain dehydrogenase; Provisional

Probab=98.43  E-value=3.3e-06  Score=61.10  Aligned_cols=114  Identities=18%  Similarity=0.119  Sum_probs=76.3

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.+    .+..++|++||.....+.                     .....|+.+|...|.+++.+
T Consensus       112 ~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~y~~sK~~~~~~~~~l  170 (250)
T PRK12939        112 MNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA---------------------PKLGAYVASKGAVIGMTRSL  170 (250)
T ss_pred             HHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC---------------------CCcchHHHHHHHHHHHHHHH
Confidence            46899999999988764    234599999995333211                     13356999999999999876


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   .++.+..++||.+..+.........   +.......     .....+++++|++++++.++..+
T Consensus       171 ~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~---~~~~~~~~-----~~~~~~~~~~dva~~~~~l~~~~  232 (250)
T PRK12939        171 ARELGGRGITVNAIAPGLTATEATAYVPADE---RHAYYLKG-----RALERLQVPDDVAGAVLFLLSDA  232 (250)
T ss_pred             HHHHhhhCEEEEEEEECCCCCccccccCChH---HHHHHHhc-----CCCCCCCCHHHHHHHHHHHhCcc
Confidence            644   4789999999988655422110001   11111111     23456789999999999999764

>PRK06841 short chain dehydrogenase; Provisional

Probab=98.43  E-value=8.2e-06  Score=59.33  Aligned_cols=124  Identities=16%  Similarity=0.151  Sum_probs=81.2

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..++|++||.++.++.                     .....|+.+|...+.+.+.+
T Consensus       117 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  175 (255)
T PRK06841        117 IDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVAL---------------------ERHVAYCASKAGVVGMTKVL  175 (255)
T ss_pred             HHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCC---------------------CCCchHHHHHHHHHHHHHHH
Confidence            56899999999998764    356799999996554431                     12356999999999988877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC--CCcE-E
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SGRY-L  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~~-~  151 (178)
                      +.+   .|+.+..++||.+-.+.........  ...... ...     ....+.+++|++++++.++..+..  .|.. .
T Consensus       176 a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~--~~~~~~-~~~-----~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~  247 (255)
T PRK06841        176 ALEWGPYGITVNAISPTVVLTELGKKAWAGE--KGERAK-KLI-----PAGRFAYPEEIAAAALFLASDAAAMITGENLV  247 (255)
T ss_pred             HHHHHhhCeEEEEEEeCcCcCcccccccchh--HHHHHH-hcC-----CCCCCcCHHHHHHHHHHHcCccccCccCCEEE
Confidence            665   4799999999988665321110000  011111 111     123578999999999999876432  4544 4


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       248 ~dg  250 (255)
T PRK06841        248 IDG  250 (255)
T ss_pred             ECC
Confidence            433

>PRK06101 short chain dehydrogenase; Provisional

Probab=98.42  E-value=7.1e-06  Score=59.28  Aligned_cols=103  Identities=20%  Similarity=0.194  Sum_probs=74.4

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH-
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA-   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-   78 (178)
                      +++|+.++.++++++...  +.+++|++||..+.++.                     .....|+.+|...+.+.+.++ 
T Consensus        99 ~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~l~~  157 (240)
T PRK06101         99 FNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELAL---------------------PRAEAYGASKAAVAYFARTLQL  157 (240)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCC---------------------CCCchhhHHHHHHHHHHHHHHH
Confidence            578999999999999863  33679999885443321                     133579999999999988765 


Q ss_pred             --HhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           79 --VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        79 --~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                        ...|++++++||+.+.++.....              ..     ..-..+..+|+++.++..++..
T Consensus       158 e~~~~gi~v~~v~pg~i~t~~~~~~--------------~~-----~~~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        158 DLRPKGIEVVTVFPGFVATPLTDKN--------------TF-----AMPMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             HHHhcCceEEEEeCCcCCCCCcCCC--------------CC-----CCCcccCHHHHHHHHHHHHhcC
Confidence              35589999999999987642211              00     0011468999999999999875

>PRK06194 hypothetical protein; Provisional

Probab=98.41  E-value=1.8e-06  Score=63.92  Aligned_cols=71  Identities=17%  Similarity=0.104  Sum_probs=49.1

Q ss_pred             chhHHHHHHHHHHH----HHhCCC------CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVA----AAEAKV------RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE   71 (178)
Q Consensus         2 ~~~nv~~t~~ll~~----~~~~~~------~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E   71 (178)
                      +++|+.++.+++++    +.+.+.      .++|++||.++.++.                     .+.+.|+.+|...|
T Consensus       111 ~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~  169 (287)
T PRK06194        111 LGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP---------------------PAMGIYNVSKHAVV  169 (287)
T ss_pred             HhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC---------------------CCCcchHHHHHHHH
Confidence            56899999887766    344332      589999995444321                     13467999999999


Q ss_pred             HHHHHHHHhcC-----CcEEEecCCce
Q 030406           72 KAAWEEAVARG-----VDLVVVNPVLV   93 (178)
Q Consensus        72 ~~~~~~~~~~~-----~~~~i~R~~~v   93 (178)
                      .+++.++.+.+     +.+..+.|+.+
T Consensus       170 ~~~~~l~~e~~~~~~~irv~~v~pg~i  196 (287)
T PRK06194        170 SLTETLYQDLSLVTDQVGASVLCPYFV  196 (287)
T ss_pred             HHHHHHHHHHhhcCCCeEEEEEEeCcc
Confidence            99998876654     44455666655

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.40  E-value=1.2e-05  Score=58.36  Aligned_cols=114  Identities=16%  Similarity=0.106  Sum_probs=76.4

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..++|++||. ... .                   +..+.+.|+.+|.+.|.+++.+
T Consensus       115 ~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~-~~~-~-------------------~~~~~~~Y~~sK~a~~~l~~~l  173 (253)
T PRK08642        115 LEGSVKGALNTIQAALPGMREQGFGRIINIGTN-LFQ-N-------------------PVVPYHDYTTAKAALLGLTRNL  173 (253)
T ss_pred             HhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCc-ccc-C-------------------CCCCccchHHHHHHHHHHHHHH
Confidence            5789999999999886    3455789999983 221 0                   1124567999999999999998


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   .|+.+..++||.+-.+.......   ...........     ....+.+.+|+++++..++..+
T Consensus       174 a~~~~~~~i~v~~i~pG~v~t~~~~~~~~---~~~~~~~~~~~-----~~~~~~~~~~va~~~~~l~~~~  235 (253)
T PRK08642        174 AAELGPYGITVNMVSGGLLRTTDASAATP---DEVFDLIAATT-----PLRKVTTPQEFADAVLFFASPW  235 (253)
T ss_pred             HHHhCccCeEEEEEeecccCCchhhccCC---HHHHHHHHhcC-----CcCCCCCHHHHHHHHHHHcCch
Confidence            766   36888899999885442111111   11122222221     1234789999999999998753

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.40  E-value=5.8e-06  Score=59.89  Aligned_cols=122  Identities=15%  Similarity=0.072  Sum_probs=78.7

Q ss_pred             chhHHHHHHHHHHHHHh----C-CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----A-KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.+++.++..    . .-.++|++|| .+.++.                     .+...|+.+|.+.+.+++.
T Consensus       119 ~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss-~~~~~~---------------------~~~~~Y~~sK~a~~~l~~~  176 (253)
T PRK08217        119 IDVNLTGVFLCGREAAAKMIESGSKGVIINISS-IARAGN---------------------MGQTNYSASKAGVAAMTVT  176 (253)
T ss_pred             HhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcc-ccccCC---------------------CCCchhHHHHHHHHHHHHH
Confidence            46788888877655442    2 2246899988 454431                     1346699999999999888


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC-cEEE
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLC  152 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~  152 (178)
                      ++.+   .+++++.++|+.+.++..... .   ...........     ....+.+++|+++++..++......| .+++
T Consensus       177 la~~~~~~~i~v~~v~pg~v~t~~~~~~-~---~~~~~~~~~~~-----~~~~~~~~~~~a~~~~~l~~~~~~~g~~~~~  247 (253)
T PRK08217        177 WAKELARYGIRVAAIAPGVIETEMTAAM-K---PEALERLEKMI-----PVGRLGEPEEIAHTVRFIIENDYVTGRVLEI  247 (253)
T ss_pred             HHHHHHHcCcEEEEEeeCCCcCcccccc-C---HHHHHHHHhcC-----CcCCCcCHHHHHHHHHHHHcCCCcCCcEEEe
Confidence            7654   589999999999977643221 1   11111111111     22346789999999999987654344 5555


Q ss_pred             ec
Q 030406          153 AE  154 (178)
Q Consensus       153 ~~  154 (178)
                      .+
T Consensus       248 ~g  249 (253)
T PRK08217        248 DG  249 (253)
T ss_pred             CC
Confidence            44

>PRK08251 short chain dehydrogenase; Provisional

Probab=98.40  E-value=6.7e-06  Score=59.55  Aligned_cols=103  Identities=18%  Similarity=0.118  Sum_probs=73.4

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..++|++||..++++.+                    .+...|+.+|...+.+.+.+
T Consensus       109 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l  168 (248)
T PRK08251        109 AETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLP--------------------GVKAAYAASKAGVASLGEGL  168 (248)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCC--------------------CCcccHHHHHHHHHHHHHHH
Confidence            4689999988888764    45678999999965544311                    23467999999999988876


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      ..+   .+++++.++|+.+.++....            . +       ....++..+|.+++++.+++.+
T Consensus       169 ~~~~~~~~i~v~~v~pg~v~t~~~~~------------~-~-------~~~~~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        169 RAELAKTPIKVSTIEPGYIRSEMNAK------------A-K-------STPFMVDTETGVKALVKAIEKE  218 (248)
T ss_pred             HHHhcccCcEEEEEecCcCcchhhhc------------c-c-------cCCccCCHHHHHHHHHHHHhcC
Confidence            654   36899999999986542111            0 0       0123578999999999999764

>PRK07904 short chain dehydrogenase; Provisional

Probab=98.39  E-value=7.7e-06  Score=59.69  Aligned_cols=102  Identities=16%  Similarity=0.064  Sum_probs=69.7

Q ss_pred             chhHHHHHHH----HHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKN----VIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~----ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..    ++.++++.+..++|++||..+..+                     ..+...|+.+|.....+.+.+
T Consensus       115 ~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~---------------------~~~~~~Y~~sKaa~~~~~~~l  173 (253)
T PRK07904        115 AEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERV---------------------RRSNFVYGSTKAGLDGFYLGL  173 (253)
T ss_pred             HHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCC---------------------CCCCcchHHHHHHHHHHHHHH
Confidence            4678887765    667777777789999999533211                     012356999999998665543


Q ss_pred             ---HHhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 ---AVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ---~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                         ....++++++++||.+..+-...            . .       .....+..+|+|+.++.+++++
T Consensus       174 ~~el~~~~i~v~~v~Pg~v~t~~~~~------------~-~-------~~~~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        174 GEALREYGVRVLVVRPGQVRTRMSAH------------A-K-------EAPLTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             HHHHhhcCCEEEEEeeCceecchhcc------------C-C-------CCCCCCCHHHHHHHHHHHHHcC
Confidence               34568999999999996532100            0 0       0112468999999999999765

>PRK07985 oxidoreductase; Provisional

Probab=98.38  E-value=1.1e-05  Score=60.16  Aligned_cols=115  Identities=16%  Similarity=0.048  Sum_probs=76.5

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++..+++++...  .-.+||++||..+..+.                     .....|+.+|...+.+.+.++.
T Consensus       157 ~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~---------------------~~~~~Y~asKaal~~l~~~la~  215 (294)
T PRK07985        157 FAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPS---------------------PHLLDYAATKAAILNYSRGLAK  215 (294)
T ss_pred             HHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCC---------------------CCcchhHHHHHHHHHHHHHHHH
Confidence            678999999999998753  22589999995332210                     1235699999999999888766


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +   .|+++.+++|+.+.++..... ..... .........     ....+...+|++++++.++..+
T Consensus       216 el~~~gIrvn~i~PG~v~t~~~~~~-~~~~~-~~~~~~~~~-----~~~r~~~pedva~~~~fL~s~~  276 (294)
T PRK07985        216 QVAEKGIRVNIVAPGPIWTALQISG-GQTQD-KIPQFGQQT-----PMKRAGQPAELAPVYVYLASQE  276 (294)
T ss_pred             HHhHhCcEEEEEECCcCcccccccc-CCCHH-HHHHHhccC-----CCCCCCCHHHHHHHHHhhhChh
Confidence            5   589999999999988742111 00001 111111111     1123567999999999998754

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=98.38  E-value=1.3e-05  Score=57.86  Aligned_cols=113  Identities=14%  Similarity=0.160  Sum_probs=72.5

Q ss_pred             chhHHHHHHHHHHH----HHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVA----AAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++..+    +++.+..++|++||..+..+.                     .....|+.+|.+.+.+++.+
T Consensus       108 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  166 (245)
T PRK12824        108 INTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQ---------------------FGQTNYSAAKAGMIGFTKAL  166 (245)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCC---------------------CCChHHHHHHHHHHHHHHHH
Confidence            46889998887554    455567799999995332110                     12346999999999887776


Q ss_pred             HH---hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~---~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.   ..++++.+++|+.+.++..... ..   ..........     ....+..++|+++++..++...
T Consensus       167 ~~~~~~~~i~v~~v~pg~~~t~~~~~~-~~---~~~~~~~~~~-----~~~~~~~~~~va~~~~~l~~~~  227 (245)
T PRK12824        167 ASEGARYGITVNCIAPGYIATPMVEQM-GP---EVLQSIVNQI-----PMKRLGTPEEIAAAVAFLVSEA  227 (245)
T ss_pred             HHHHHHhCeEEEEEEEcccCCcchhhc-CH---HHHHHHHhcC-----CCCCCCCHHHHHHHHHHHcCcc
Confidence            54   4479999999999976542221 11   1111111211     1233557899999998888553

>PRK07825 short chain dehydrogenase; Provisional

Probab=98.38  E-value=9e-06  Score=59.84  Aligned_cols=106  Identities=22%  Similarity=0.156  Sum_probs=71.8

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..+||++||.++..+                     ......|+.+|...+.+.+.+
T Consensus       106 ~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~~~~~l  164 (273)
T PRK07825        106 LDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIP---------------------VPGMATYCASKHAVVGFTDAA  164 (273)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCC---------------------CCCCcchHHHHHHHHHHHHHH
Confidence            4688888877776654    456779999999644321                     123467999999888766554


Q ss_pred             HH---hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC
Q 030406           78 AV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA  146 (178)
Q Consensus        78 ~~---~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  146 (178)
                      ..   ..|+++++++|+.+-.+....               ..   +.....++.++|+|+.++.++..+..
T Consensus       165 ~~el~~~gi~v~~v~Pg~v~t~~~~~---------------~~---~~~~~~~~~~~~va~~~~~~l~~~~~  218 (273)
T PRK07825        165 RLELRGTGVHVSVVLPSFVNTELIAG---------------TG---GAKGFKNVEPEDVAAAIVGTVAKPRP  218 (273)
T ss_pred             HHHhhccCcEEEEEeCCcCcchhhcc---------------cc---cccCCCCCCHHHHHHHHHHHHhCCCC
Confidence            33   458999999999874332111               00   11233578999999999999987643

>PRK12747 short chain dehydrogenase; Provisional

Probab=98.36  E-value=9.3e-06  Score=59.03  Aligned_cols=115  Identities=13%  Similarity=0.090  Sum_probs=75.5

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++..+++++...  +..++|++||.++..+                     ......|+.+|...+.+.+.++.
T Consensus       116 ~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~~sKaa~~~~~~~la~  174 (252)
T PRK12747        116 VSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS---------------------LPDFIAYSMTKGAINTMTFTLAK  174 (252)
T ss_pred             HHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccC---------------------CCCchhHHHHHHHHHHHHHHHHH
Confidence            578999999999887653  2358999999543221                     11335799999999999887765


Q ss_pred             hc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        80 ~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.   |+++..+.||.+.++........  ..........     .....+.+++|+++++..++...
T Consensus       175 e~~~~girvn~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~dva~~~~~l~s~~  235 (252)
T PRK12747        175 QLGARGITVNAILPGFIKTDMNAELLSD--PMMKQYATTI-----SAFNRLGEVEDIADTAAFLASPD  235 (252)
T ss_pred             HHhHcCCEEEEEecCCccCchhhhcccC--HHHHHHHHhc-----CcccCCCCHHHHHHHHHHHcCcc
Confidence            43   79999999999976632111000  0011111111     11234778999999999988643

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=98.36  E-value=1.2e-05  Score=57.46  Aligned_cols=118  Identities=19%  Similarity=0.129  Sum_probs=80.3

Q ss_pred             CchhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            1 MVEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         1 ~~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      ++++|+.|..+...+..    +.+..++|.+||+++.|.-                     ...+.|+.+|+....+.+.
T Consensus       108 Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y---------------------~~~~vY~ATK~aV~~fs~~  166 (246)
T COG4221         108 MIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPY---------------------PGGAVYGATKAAVRAFSLG  166 (246)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccC---------------------CCCccchhhHHHHHHHHHH
Confidence            36899999888887775    4455699999998665421                     2446799999999988776


Q ss_pred             HHHhc---CCcEEEecCCceeCCCCCCCChh-hHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC
Q 030406           77 EAVAR---GVDLVVVNPVLVLGPLLQSTVNA-SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG  148 (178)
Q Consensus        77 ~~~~~---~~~~~i~R~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~  148 (178)
                      ...+.   +++++.+-||.+-.......... ......+.         .....++..+|+|+.+..++++|..-.
T Consensus       167 LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~---------y~~~~~l~p~dIA~~V~~~~~~P~~vn  233 (246)
T COG4221         167 LRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKV---------YKGGTALTPEDIAEAVLFAATQPQHVN  233 (246)
T ss_pred             HHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHH---------hccCCCCCHHHHHHHHHHHHhCCCccc
Confidence            54443   78999999998844321111000 00111111         134567889999999999999997654

>PRK07069 short chain dehydrogenase; Validated

Probab=98.34  E-value=1e-05  Score=58.62  Aligned_cols=117  Identities=15%  Similarity=0.107  Sum_probs=74.2

Q ss_pred             chhHHH----HHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVI----GTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~----~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.    ++.+++.++++.+.+++|++||..+..+.                     .....|+.+|...+.+.+.+
T Consensus       107 ~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  165 (251)
T PRK07069        107 MAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAE---------------------PDYTAYNASKAAVASLTKSI  165 (251)
T ss_pred             HHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCC---------------------CCCchhHHHHHHHHHHHHHH
Confidence            356776    77888888888777899999995443221                     13356999999999998876


Q ss_pred             HHhc-----CCcEEEecCCceeCCCCCCCChh-hHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVAR-----GVDLVVVNPVLVLGPLLQSTVNA-SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~~-----~~~~~i~R~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+.     ++++..++|+.+.++........ ............     .....+.+++|++++++.++..+
T Consensus       166 a~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~va~~~~~l~~~~  233 (251)
T PRK07069        166 ALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARG-----VPLGRLGEPDDVAHAVLYLASDE  233 (251)
T ss_pred             HHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhcc-----CCCCCCcCHHHHHHHHHHHcCcc
Confidence            6542     47888999998877643211000 000011111111     11234568999999999887654

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.33  E-value=1.9e-05  Score=56.94  Aligned_cols=119  Identities=13%  Similarity=0.085  Sum_probs=76.3

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+.+++|++||...+++.                     .....|+.+|...+.+++.+
T Consensus       111 ~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~---------------------~~~~~y~~sK~a~~~~~~~~  169 (247)
T PRK05565        111 IDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGA---------------------SCEVLYSASKGAVNAFTKAL  169 (247)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCC---------------------CCccHHHHHHHHHHHHHHHH
Confidence            56799998888877764    456789999996554431                     12346999999888887766


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCCcE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASGRY  150 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~  150 (178)
                      +.+   .|++++++||+.+-.+...... ..  ....... .     .....+...+|+++.++.++....  ..|.+
T Consensus       170 ~~~~~~~gi~~~~v~pg~v~t~~~~~~~-~~--~~~~~~~-~-----~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~  238 (247)
T PRK05565        170 AKELAPSGIRVNAVAPGAIDTEMWSSFS-EE--DKEGLAE-E-----IPLGRLGKPEEIAKVVLFLASDDASYITGQI  238 (247)
T ss_pred             HHHHHHcCeEEEEEEECCccCccccccC-hH--HHHHHHh-c-----CCCCCCCCHHHHHHHHHHHcCCccCCccCcE
Confidence            544   4899999999998654322211 11  1111111 0     112346688999999999886643  24444

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=98.32  E-value=2.1e-05  Score=56.90  Aligned_cols=122  Identities=12%  Similarity=0.032  Sum_probs=79.2

Q ss_pred             chhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++.+    .+ ..++|++||. ..+...                    .....|+.+|...+.+.+.
T Consensus       108 ~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~-~~~~~~--------------------~~~~~Y~~sKaa~~~~~~~  166 (248)
T TIGR01832       108 MNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASM-LSFQGG--------------------IRVPSYTASKHGVAGLTKL  166 (248)
T ss_pred             HhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecH-HhccCC--------------------CCCchhHHHHHHHHHHHHH
Confidence            56899999999888753    33 4689999995 433211                    1234699999999999998


Q ss_pred             HHHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC--CCcEE
Q 030406           77 EAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SGRYL  151 (178)
Q Consensus        77 ~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~~~  151 (178)
                      ++.+.   |+++.+++||.+..+..... ..... .........     ....++..+|+|++++.++.....  .|.++
T Consensus       167 la~e~~~~gi~v~~v~pg~v~t~~~~~~-~~~~~-~~~~~~~~~-----~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  239 (248)
T TIGR01832       167 LANEWAAKGINVNAIAPGYMATNNTQAL-RADED-RNAAILERI-----PAGRWGTPDDIGGPAVFLASSASDYVNGYTL  239 (248)
T ss_pred             HHHHhCccCcEEEEEEECcCcCcchhcc-ccChH-HHHHHHhcC-----CCCCCcCHHHHHHHHHHHcCccccCcCCcEE
Confidence            87764   79999999999876532110 00000 011111111     134688999999999999875432  35553

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06523 short chain dehydrogenase; Provisional

Probab=98.32  E-value=4.3e-05  Score=55.74  Aligned_cols=127  Identities=13%  Similarity=0.127  Sum_probs=76.9

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++.+++    ++.+..++|++||..+..+         .           ..+...|+.+|...+.+.+.+
T Consensus       107 ~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~---------~-----------~~~~~~Y~~sK~a~~~l~~~~  166 (260)
T PRK06523        107 LNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP---------L-----------PESTTAYAAAKAALSTYSKSL  166 (260)
T ss_pred             HhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC---------C-----------CCCcchhHHHHHHHHHHHHHH
Confidence            568999987776555    4455678999999533211         0           013467999999999998877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChh-------hHH----HHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNA-------SII----HILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~-------~~~----~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      +.+   .|+.+.+++||.+..+........       ...    .+.+.. +..     ....+..++|+++++..++..
T Consensus       167 a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----p~~~~~~~~~va~~~~~l~s~  240 (260)
T PRK06523        167 SKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSL-GGI-----PLGRPAEPEEVAELIAFLASD  240 (260)
T ss_pred             HHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHh-ccC-----ccCCCCCHHHHHHHHHHHhCc
Confidence            654   479999999999977642110000       000    001111 111     112345789999999998865


Q ss_pred             CC--CCC-cEEEec
Q 030406          144 PS--ASG-RYLCAE  154 (178)
Q Consensus       144 ~~--~~~-~~~~~~  154 (178)
                      +.  ..| .+.+.+
T Consensus       241 ~~~~~~G~~~~vdg  254 (260)
T PRK06523        241 RAASITGTEYVIDG  254 (260)
T ss_pred             ccccccCceEEecC
Confidence            32  234 555543

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=98.30  E-value=4e-05  Score=55.76  Aligned_cols=122  Identities=13%  Similarity=0.124  Sum_probs=79.6

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++.+++.+    .+..++|++||..+..+.                     .....|+.+|...+.+++.+
T Consensus       116 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  174 (256)
T PRK06124        116 LETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVAR---------------------AGDAVYPAAKQGLTGLMRAL  174 (256)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCC---------------------CCccHhHHHHHHHHHHHHHH
Confidence            56889988888866653    567899999995433211                     12357999999999988876


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC--CCcEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SGRYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~~~  151 (178)
                      +.+   .++.+..++|+.+.++....... . ..+........     ....+++++|++++++.++..+..  .|.++
T Consensus       175 a~e~~~~~i~v~~i~pg~v~t~~~~~~~~-~-~~~~~~~~~~~-----~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i  246 (256)
T PRK06124        175 AAEFGPHGITSNAIAPGYFATETNAAMAA-D-PAVGPWLAQRT-----PLGRWGRPEEIAGAAVFLASPAASYVNGHVL  246 (256)
T ss_pred             HHHHHHhCcEEEEEEECCccCcchhhhcc-C-hHHHHHHHhcC-----CCCCCCCHHHHHHHHHHHcCcccCCcCCCEE
Confidence            544   37999999999998764221100 0 11111222221     123478999999999999976532  45553

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.30  E-value=2.5e-05  Score=56.06  Aligned_cols=115  Identities=12%  Similarity=0.121  Sum_probs=76.2

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..++|++||..+.++.                     .....|+.+|...+.+.+.+
T Consensus        96 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  154 (235)
T PRK06550         96 FDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG---------------------GGGAAYTASKHALAGFTKQL  154 (235)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC---------------------CCCcccHHHHHHHHHHHHHH
Confidence            57899999999988863    345689999995443321                     12356999999999888876


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+.   |+++.+++|+.+.++.......  ...+.+......     ....+...+|++++++.++...
T Consensus       155 a~~~~~~gi~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~~~~~a~~~~~l~s~~  217 (235)
T PRK06550        155 ALDYAKDGIQVFGIAPGAVKTPMTAADFE--PGGLADWVARET-----PIKRWAEPEEVAELTLFLASGK  217 (235)
T ss_pred             HHHhhhcCeEEEEEeeCCccCcccccccC--chHHHHHHhccC-----CcCCCCCHHHHHHHHHHHcChh
Confidence            6554   8999999999997764322111  011111111111     1233677899999999998653

>PRK08264 short chain dehydrogenase; Validated

Probab=98.29  E-value=1.7e-05  Score=57.08  Aligned_cols=74  Identities=18%  Similarity=0.039  Sum_probs=56.2

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..++|++||..++.+                     ..+...|+.+|...|.+.+.+
T Consensus       102 ~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~---------------------~~~~~~y~~sK~a~~~~~~~l  160 (238)
T PRK08264        102 METNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVN---------------------FPNLGTYSASKAAAWSLTQAL  160 (238)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccC---------------------CCCchHhHHHHHHHHHHHHHH
Confidence            4689999999998875    345678999999433221                     124467999999999998876


Q ss_pred             HHh---cCCcEEEecCCceeCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGP   96 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~   96 (178)
                      +.+   .++++.++||+.+.++
T Consensus       161 ~~~~~~~~i~~~~v~pg~v~t~  182 (238)
T PRK08264        161 RAELAPQGTRVLGVHPGPIDTD  182 (238)
T ss_pred             HHHhhhcCeEEEEEeCCccccc
Confidence            654   3899999999988654

>PRK07035 short chain dehydrogenase; Provisional

Probab=98.28  E-value=4.2e-05  Score=55.52  Aligned_cols=125  Identities=18%  Similarity=0.108  Sum_probs=78.5

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+++++    ++.+..++|++||..+..+                     ..+.+.|+.+|...+.+++.+
T Consensus       114 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------------~~~~~~Y~~sK~al~~~~~~l  172 (252)
T PRK07035        114 VDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP---------------------GDFQGIYSITKAAVISMTKAF  172 (252)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC---------------------CCCCcchHHHHHHHHHHHHHH
Confidence            568889988877766    4455679999999544321                     124467999999999999988


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC--CCcE-E
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SGRY-L  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~~-~  151 (178)
                      +.+.   |+++..+.||.+-.+....... . ...........+     ...+...+|+++++..++.....  .|.+ .
T Consensus       173 ~~e~~~~gi~v~~i~PG~v~t~~~~~~~~-~-~~~~~~~~~~~~-----~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~  245 (252)
T PRK07035        173 AKECAPFGIRVNALLPGLTDTKFASALFK-N-DAILKQALAHIP-----LRRHAEPSEMAGAVLYLASDASSYTTGECLN  245 (252)
T ss_pred             HHHHhhcCEEEEEEeeccccCcccccccC-C-HHHHHHHHccCC-----CCCcCCHHHHHHHHHHHhCccccCccCCEEE
Confidence            7654   7999999999885432111100 0 111111111111     22356789999999998876432  4433 4


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       246 ~dg  248 (252)
T PRK07035        246 VDG  248 (252)
T ss_pred             eCC
Confidence            544

>PRK05693 short chain dehydrogenase; Provisional

Probab=98.28  E-value=0.00012  Score=53.90  Aligned_cols=127  Identities=14%  Similarity=0.066  Sum_probs=77.5

Q ss_pred             chhHHHHHHHHHHHHHh---CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE---AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.++++++..   .+..++|++||..+.++.                     .....|+.+|...+.+.+.++
T Consensus       100 ~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~~sK~al~~~~~~l~  158 (274)
T PRK05693        100 FETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT---------------------PFAGAYCASKAAVHALSDALR  158 (274)
T ss_pred             HHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC---------------------CCccHHHHHHHHHHHHHHHHH
Confidence            57899999998888753   234679999995443321                     134579999999999877665


Q ss_pred             Hh---cCCcEEEecCCceeCCCCCCCCh----------hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC
Q 030406           79 VA---RGVDLVVVNPVLVLGPLLQSTVN----------ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        79 ~~---~~~~~~i~R~~~v~G~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                      .+   .|+++.+++||.+..+-......          ............. .   .........+|+++.++.+++++.
T Consensus       159 ~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~a~~i~~~~~~~~  234 (274)
T PRK05693        159 LELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARA-R---ASQDNPTPAAEFARQLLAAVQQSP  234 (274)
T ss_pred             HHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHH-H---hccCCCCCHHHHHHHHHHHHhCCC
Confidence            43   68999999999996542111000          0000000000000 0   001123568999999999998765


Q ss_pred             CCCcEEEe
Q 030406          146 ASGRYLCA  153 (178)
Q Consensus       146 ~~~~~~~~  153 (178)
                      ....+..+
T Consensus       235 ~~~~~~~g  242 (274)
T PRK05693        235 RPRLVRLG  242 (274)
T ss_pred             CCceEEec
Confidence            54445443

>PRK06057 short chain dehydrogenase; Provisional

Probab=98.27  E-value=2.1e-05  Score=57.25  Aligned_cols=117  Identities=17%  Similarity=0.119  Sum_probs=71.8

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+++++.    +.+..++|++||..+.++..                    .+...|+.+|...+.+.+..
T Consensus       109 ~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~--------------------~~~~~Y~~sKaal~~~~~~l  168 (255)
T PRK06057        109 QDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSA--------------------TSQISYTASKGGVLAMSREL  168 (255)
T ss_pred             HHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCC--------------------CCCcchHHHHHHHHHHHHHH
Confidence            4678888877777664    34556899999854444311                    13356999998777776643


Q ss_pred             HH---hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~---~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.   ..|+.+.+++||.+.++..............+... .   .+  ...+..++|+++++..++...
T Consensus       169 ~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~-~---~~--~~~~~~~~~~a~~~~~l~~~~  232 (255)
T PRK06057        169 GVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLV-H---VP--MGRFAEPEEIAAAVAFLASDD  232 (255)
T ss_pred             HHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHh-c---CC--CCCCcCHHHHHHHHHHHhCcc
Confidence            32   34799999999999776432211101111111111 1   11  225788999999998877643

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.27  E-value=3.9e-05  Score=55.85  Aligned_cols=128  Identities=13%  Similarity=0.084  Sum_probs=76.5

Q ss_pred             chhHHHHHHHH----HHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNV----IVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~l----l~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+    +..+++.+..++|++||. +.++..                   ......|+.+|.+.+.+.+.+
T Consensus       107 ~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~-~~~~~~-------------------~~~~~~Y~asKaa~~~~~~~l  166 (255)
T PRK06463        107 IKINLNGAIYTTYEFLPLLKLSKNGAIVNIASN-AGIGTA-------------------AEGTTFYAITKAGIIILTRRL  166 (255)
T ss_pred             HhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCH-HhCCCC-------------------CCCccHhHHHHHHHHHHHHHH
Confidence            57899996554    455554556799999994 433210                   013356999999999999887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCC-ChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQST-VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RY  150 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~  150 (178)
                      +.+   .|+++..++||.+-.+-.... .......+........     ....+...+|++++++.++..+.  ..| .+
T Consensus       167 a~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~  241 (255)
T PRK06463        167 AFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKT-----VLKTTGKPEDIANIVLFLASDDARYITGQVI  241 (255)
T ss_pred             HHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCC-----CcCCCcCHHHHHHHHHHHcChhhcCCCCCEE
Confidence            754   479999999998843321100 0001111111111111     12345679999999999987643  234 44


Q ss_pred             EEec
Q 030406          151 LCAE  154 (178)
Q Consensus       151 ~~~~  154 (178)
                      .+.+
T Consensus       242 ~~dg  245 (255)
T PRK06463        242 VADG  245 (255)
T ss_pred             EECC
Confidence            5543

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.26  E-value=1.2e-05  Score=61.81  Aligned_cols=119  Identities=19%  Similarity=0.089  Sum_probs=72.8

Q ss_pred             hhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcC
Q 030406            3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG   82 (178)
Q Consensus         3 ~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~   82 (178)
                      .+.-.|++|+++||+.+|++|++++|+++.-   .       .....|.     ..-...+-.+|+.+|+.++    +.|
T Consensus       175 ~VD~~g~knlvdA~~~aGvk~~vlv~si~~~---~-------~~~~~~~-----~~~~~~~~~~k~~~e~~~~----~Sg  235 (411)
T KOG1203|consen  175 KVDYEGTKNLVDACKKAGVKRVVLVGSIGGT---K-------FNQPPNI-----LLLNGLVLKAKLKAEKFLQ----DSG  235 (411)
T ss_pred             eecHHHHHHHHHHHHHhCCceEEEEEeecCc---c-------cCCCchh-----hhhhhhhhHHHHhHHHHHH----hcC
Confidence            4567899999999999999999999885321   1       1111000     0012245577777777655    569


Q ss_pred             CcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCc-cccCCCCcccccHHHHHHHHHHhhcCCCCCC
Q 030406           83 VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA-KTYANSVQAYVHVRDVALAHILVYETPSASG  148 (178)
Q Consensus        83 ~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~  148 (178)
                      ++.+|+|++...-.......        ....+.. ...++..--.+.-.|+|++++.++..+....
T Consensus       236 l~ytiIR~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~r~~vael~~~all~~~~~~  294 (411)
T KOG1203|consen  236 LPYTIIRPGGLEQDTGGQRE--------VVVDDEKELLTVDGGAYSISRLDVAELVAKALLNEAATF  294 (411)
T ss_pred             CCcEEEeccccccCCCCcce--------ecccCccccccccccceeeehhhHHHHHHHHHhhhhhcc
Confidence            99999999987543211110        0000111 1111222246788899999999998876655

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=98.26  E-value=2.3e-05  Score=56.56  Aligned_cols=123  Identities=18%  Similarity=0.161  Sum_probs=76.4

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.+    .+.+++|++||..+.++.+                     ....|+.+|...+.+++.+
T Consensus       108 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------------------~~~~Y~~sk~a~~~~~~~l  166 (245)
T PRK12936        108 LEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNP---------------------GQANYCASKAGMIGFSKSL  166 (245)
T ss_pred             HhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCC---------------------CCcchHHHHHHHHHHHHHH
Confidence            57899999888887653    4567899999965555321                     2245999999888877765


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC--CC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~  151 (178)
                      +.+   .++++..++|+.+-.+..... .   ........+..     ....+.+.+|+++++..++..+..  .| .++
T Consensus       167 a~~~~~~~i~v~~i~pg~~~t~~~~~~-~---~~~~~~~~~~~-----~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~  237 (245)
T PRK12936        167 AQEIATRNVTVNCVAPGFIESAMTGKL-N---DKQKEAIMGAI-----PMKRMGTGAEVASAVAYLASSEAAYVTGQTIH  237 (245)
T ss_pred             HHHhhHhCeEEEEEEECcCcCchhccc-C---hHHHHHHhcCC-----CCCCCcCHHHHHHHHHHHcCccccCcCCCEEE
Confidence            543   479999999998754321110 0   00111111111     122356799999999888765432  34 445


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       238 ~~~  240 (245)
T PRK12936        238 VNG  240 (245)
T ss_pred             ECC
Confidence            543

>PRK12743 oxidoreductase; Provisional

Probab=98.24  E-value=2.7e-05  Score=56.74  Aligned_cols=123  Identities=12%  Similarity=0.051  Sum_probs=78.3

Q ss_pred             chhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++...    + -.++|++||..+..                     +..+...|+.+|...+.+++.
T Consensus       108 ~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~---------------------~~~~~~~Y~~sK~a~~~l~~~  166 (256)
T PRK12743        108 FTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT---------------------PLPGASAYTAAKHALGGLTKA  166 (256)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC---------------------CCCCcchhHHHHHHHHHHHHH
Confidence            578999999999887642    2 35899999953221                     113456899999999999887


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCCcE-
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASGRY-  150 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~-  150 (178)
                      ++.+   .|+++..++||.+.++..... ...   .........     ....+.+.+|+++++..++....  ..|.+ 
T Consensus       167 la~~~~~~~i~v~~v~Pg~~~t~~~~~~-~~~---~~~~~~~~~-----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  237 (256)
T PRK12743        167 MALELVEHGILVNAVAPGAIATPMNGMD-DSD---VKPDSRPGI-----PLGRPGDTHEIASLVAWLCSEGASYTTGQSL  237 (256)
T ss_pred             HHHHhhhhCeEEEEEEeCCccCcccccc-ChH---HHHHHHhcC-----CCCCCCCHHHHHHHHHHHhCccccCcCCcEE
Confidence            6654   479999999999987642211 011   111111111     11124588999999988886543  24544 


Q ss_pred             EEec
Q 030406          151 LCAE  154 (178)
Q Consensus       151 ~~~~  154 (178)
                      .+.+
T Consensus       238 ~~dg  241 (256)
T PRK12743        238 IVDG  241 (256)
T ss_pred             EECC
Confidence            4443

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=98.24  E-value=3.3e-05  Score=56.16  Aligned_cols=115  Identities=10%  Similarity=0.080  Sum_probs=76.4

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+++++.+    .+..++|++||..+.++.                     .+...|+.+|...+.+++.+
T Consensus       114 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  172 (254)
T PRK08085        114 IAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGR---------------------DTITPYAASKGAVKMLTRGM  172 (254)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCC---------------------CCCcchHHHHHHHHHHHHHH
Confidence            57899998888887764    455789999995433211                     23457999999999999987


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   .|+++..++||.+..+.......  ...+........     ....+...+|+++++..++...
T Consensus       173 a~e~~~~gi~v~~v~pG~~~t~~~~~~~~--~~~~~~~~~~~~-----p~~~~~~~~~va~~~~~l~~~~  235 (254)
T PRK08085        173 CVELARHNIQVNGIAPGYFKTEMTKALVE--DEAFTAWLCKRT-----PAARWGDPQELIGAAVFLSSKA  235 (254)
T ss_pred             HHHHHhhCeEEEEEEeCCCCCcchhhhcc--CHHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHhCcc
Confidence            655   38999999999997764221100  011112222221     1234678999999998888753

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=98.23  E-value=5.3e-05  Score=55.17  Aligned_cols=124  Identities=16%  Similarity=0.149  Sum_probs=78.8

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..++|++||..+..+                     ..+...|+.+|.+.+.+++.+
T Consensus       115 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~l  173 (255)
T PRK06113        115 YELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK---------------------NINMTSYASSKAAASHLVRNM  173 (255)
T ss_pred             HHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCC---------------------CCCcchhHHHHHHHHHHHHHH
Confidence            5789999999999986    334468999999533211                     123457999999999999887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC--CC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~  151 (178)
                      +.+   .++.+.++.||.+-.+.......   ...........     ....+..++|+++++..++.....  .| .++
T Consensus       174 a~~~~~~~i~v~~v~pg~~~t~~~~~~~~---~~~~~~~~~~~-----~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~  245 (255)
T PRK06113        174 AFDLGEKNIRVNGIAPGAILTDALKSVIT---PEIEQKMLQHT-----PIRRLGQPQDIANAALFLCSPAASWVSGQILT  245 (255)
T ss_pred             HHHhhhhCeEEEEEecccccccccccccC---HHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHcCccccCccCCEEE
Confidence            654   46888899999885442111100   11111111111     123367899999999999865422  34 445


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       246 ~~g  248 (255)
T PRK06113        246 VSG  248 (255)
T ss_pred             ECC
Confidence            544

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=98.22  E-value=2.9e-05  Score=56.11  Aligned_cols=113  Identities=14%  Similarity=0.115  Sum_probs=72.2

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++.+++    ++.+..++|++||..+..+.                     .....|+.+|...+.+.+.+
T Consensus       109 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------------~~~~~y~~sK~a~~~~~~~l  167 (246)
T PRK12938        109 IDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ---------------------FGQTNYSTAKAGIHGFTMSL  167 (246)
T ss_pred             HHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCC---------------------CCChhHHHHHHHHHHHHHHH
Confidence            467888866655554    45567799999995333211                     23467999999988887776


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   .|+++..++|+.+.++.....    .........+..     ....+...+|+++++..++..+
T Consensus       168 ~~~~~~~gi~v~~i~pg~~~t~~~~~~----~~~~~~~~~~~~-----~~~~~~~~~~v~~~~~~l~~~~  228 (246)
T PRK12938        168 AQEVATKGVTVNTVSPGYIGTDMVKAI----RPDVLEKIVATI-----PVRRLGSPDEIGSIVAWLASEE  228 (246)
T ss_pred             HHHhhhhCeEEEEEEecccCCchhhhc----ChHHHHHHHhcC-----CccCCcCHHHHHHHHHHHcCcc
Confidence            543   579999999999876542211    011111111211     1223567899999999887653

>PRK12937 short chain dehydrogenase; Provisional

Probab=98.21  E-value=4e-05  Score=55.32  Aligned_cols=114  Identities=20%  Similarity=0.128  Sum_probs=73.4

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++.+.  ...++|++||.+...+                     ..+.+.|+.+|...+.+++.++.
T Consensus       111 ~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~~a~  169 (245)
T PRK12937        111 IATNLRGAFVVLREAARHLGQGGRIINLSTSVIALP---------------------LPGYGPYAASKAAVEGLVHVLAN  169 (245)
T ss_pred             HhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCC---------------------CCCCchhHHHHHHHHHHHHHHHH
Confidence            568999999999888753  2358999998432211                     12446799999999999988765


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +   .++.+.+++|+.+-.+-.....  ......... ...     ...-+.+++|+++.+..++..+
T Consensus       170 ~~~~~~i~v~~i~pg~~~t~~~~~~~--~~~~~~~~~-~~~-----~~~~~~~~~d~a~~~~~l~~~~  229 (245)
T PRK12937        170 ELRGRGITVNAVAPGPVATELFFNGK--SAEQIDQLA-GLA-----PLERLGTPEEIAAAVAFLAGPD  229 (245)
T ss_pred             HhhhcCeEEEEEEeCCccCchhcccC--CHHHHHHHH-hcC-----CCCCCCCHHHHHHHHHHHcCcc
Confidence            4   3788999999987654311110  111111111 111     1223557899999999888654

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=98.20  E-value=6.2e-06  Score=59.71  Aligned_cols=132  Identities=16%  Similarity=0.125  Sum_probs=78.4

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCC----CCCch------hhhcccCchHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDES----CWSDL------EFCKNTKNWYCYGKAV   69 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~----~~~~~------~~~~~~~~~Y~~sK~~   69 (178)
                      +++|+.++..+++++...  +-.+||++||. +.++.+...+   ..|.    .-.+.      ..+....+.|+.+|..
T Consensus        68 ~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a  143 (241)
T PRK12428         68 ARVNFLGLRHLTEALLPRMAPGGAIVNVASL-AGAEWPQRLE---LHKALAATASFDEGAAWLAAHPVALATGYQLSKEA  143 (241)
T ss_pred             hhhchHHHHHHHHHHHHhccCCcEEEEeCcH-HhhccccchH---HHHhhhccchHHHHHHhhhccCCCcccHHHHHHHH
Confidence            678999999999998763  23689999995 5553221111   1111    00000      0122345789999999


Q ss_pred             HHHHHHHHH----HhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           70 AEKAAWEEA----VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        70 ~E~~~~~~~----~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      .+.+.+.++    ...|+.+..++||.+.++-.... .....  ........    .....+...+|+|+++..++..+
T Consensus       144 ~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~-~~~~~--~~~~~~~~----~~~~~~~~pe~va~~~~~l~s~~  215 (241)
T PRK12428        144 LILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDF-RSMLG--QERVDSDA----KRMGRPATADEQAAVLVFLCSDA  215 (241)
T ss_pred             HHHHHHHHHHHhhhccCeEEEEeecCCccCcccccc-hhhhh--hHhhhhcc----cccCCCCCHHHHHHHHHHHcChh
Confidence            999887766    44589999999999977632111 00000  00000000    01122567899999999988543

>PRK07102 short chain dehydrogenase; Provisional

Probab=98.19  E-value=3.3e-05  Score=55.82  Aligned_cols=103  Identities=17%  Similarity=0.087  Sum_probs=73.0

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..++|++||..+.++.                     .....|+.+|...+.+.+.+
T Consensus       104 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  162 (243)
T PRK07102        104 FRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGR---------------------ASNYVYGSAKAALTAFLSGL  162 (243)
T ss_pred             HHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCC---------------------CCCcccHHHHHHHHHHHHHH
Confidence            56899999999988764    467899999995433221                     12346999999999998876


Q ss_pred             HH---hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~---~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.   +.|+++..++|+.+.++....               ..  .+  ...++.++|+++.+..+++++
T Consensus       163 ~~el~~~gi~v~~v~pg~v~t~~~~~---------------~~--~~--~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        163 RNRLFKSGVHVLTVKPGFVRTPMTAG---------------LK--LP--GPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             HHHhhccCcEEEEEecCcccChhhhc---------------cC--CC--ccccCCHHHHHHHHHHHHhCC
Confidence            43   458999999999997652110               00  01  123567999999999999864

>PRK07454 short chain dehydrogenase; Provisional

Probab=98.18  E-value=4e-05  Score=55.30  Aligned_cols=109  Identities=17%  Similarity=0.142  Sum_probs=73.0

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++    ++.+..++|++||. ..+..                    ..+...|+.+|...+.+.+.+
T Consensus       111 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~-~~~~~--------------------~~~~~~Y~~sK~~~~~~~~~~  169 (241)
T PRK07454        111 IQLNLTSVFQCCSAVLPGMRARGGGLIINVSSI-AARNA--------------------FPQWGAYCVSKAALAAFTKCL  169 (241)
T ss_pred             HHhccHHHHHHHHHHHHHHHhcCCcEEEEEccH-HhCcC--------------------CCCccHHHHHHHHHHHHHHHH
Confidence            457888887777665    34456789999995 43321                    123467999999999988776


Q ss_pred             HH---hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC
Q 030406           78 AV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA  146 (178)
Q Consensus        78 ~~---~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  146 (178)
                      +.   ..|+++.++||+.+-.+.....   .          .....  ....++..+|+|++++.++..+..
T Consensus       170 a~e~~~~gi~v~~i~pg~i~t~~~~~~---~----------~~~~~--~~~~~~~~~~va~~~~~l~~~~~~  226 (241)
T PRK07454        170 AEEERSHGIRVCTITLGAVNTPLWDTE---T----------VQADF--DRSAMLSPEQVAQTILHLAQLPPS  226 (241)
T ss_pred             HHHhhhhCCEEEEEecCcccCCccccc---c----------ccccc--ccccCCCHHHHHHHHHHHHcCCcc
Confidence            53   3489999999999865431110   0          00000  112357899999999999987743

>PRK08267 short chain dehydrogenase; Provisional

Probab=98.18  E-value=4.6e-05  Score=55.65  Aligned_cols=111  Identities=24%  Similarity=0.204  Sum_probs=73.7

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..++|++||..+.++..                     ....|+.+|...+.+.+.+
T Consensus       105 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------------------~~~~Y~~sKaa~~~~~~~l  163 (260)
T PRK08267        105 IDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQP---------------------GLAVYSATKFAVRGLTEAL  163 (260)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCC---------------------CchhhHHHHHHHHHHHHHH
Confidence            57899999999888753    4467899999965555421                     2357999999999998887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   .++++.+++|+.+-.+..........   ....        ....-.+..+|++++++.+++.+
T Consensus       164 ~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~---~~~~--------~~~~~~~~~~~va~~~~~~~~~~  222 (260)
T PRK08267        164 DLEWRRHGIRVADVMPLFVDTAMLDGTSNEVD---AGST--------KRLGVRLTPEDVAEAVWAAVQHP  222 (260)
T ss_pred             HHHhcccCcEEEEEecCCcCCcccccccchhh---hhhH--------hhccCCCCHHHHHHHHHHHHhCC
Confidence            543   47999999999986543211000000   0000        01111356799999999999654

>PRK07109 short chain dehydrogenase; Provisional

Probab=98.16  E-value=7.8e-05  Score=56.69  Aligned_cols=110  Identities=17%  Similarity=0.106  Sum_probs=69.4

Q ss_pred             chhHHHHHHH----HHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKN----VIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~----ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.+    ++..+++.+..+||++||..+..+                     ....+.|+.+|...+.+.+.+
T Consensus       113 ~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~---------------------~~~~~~Y~asK~a~~~~~~~l  171 (334)
T PRK07109        113 TEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRS---------------------IPLQSAYCAAKHAIRGFTDSL  171 (334)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccC---------------------CCcchHHHHHHHHHHHHHHHH
Confidence            4566666555    555555555678999999533211                     013467999999999887766


Q ss_pred             HHh-----cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA-----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~-----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      ..+     .++.+++++|+.+-.+..        ....... +..   ......+..++|+|++++.++..+
T Consensus       172 ~~el~~~~~~I~v~~v~Pg~v~T~~~--------~~~~~~~-~~~---~~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        172 RCELLHDGSPVSVTMVQPPAVNTPQF--------DWARSRL-PVE---PQPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             HHHHhhcCCCeEEEEEeCCCccCchh--------hhhhhhc-ccc---ccCCCCCCCHHHHHHHHHHHHhCC
Confidence            543     368899999998854421        1111111 110   111234678999999999999875

>PRK07326 short chain dehydrogenase; Provisional

Probab=98.16  E-value=3.4e-05  Score=55.46  Aligned_cols=105  Identities=15%  Similarity=0.077  Sum_probs=72.4

Q ss_pred             chhHHHHHHHHHHHHHh---CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE---AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.++++++.+   .+.+++|++||..+..+                     ......|+.+|...+.+.+.++
T Consensus       110 ~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~---------------------~~~~~~y~~sk~a~~~~~~~~~  168 (237)
T PRK07326        110 IDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNF---------------------FAGGAAYNASKFGLVGFSEAAM  168 (237)
T ss_pred             HhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccC---------------------CCCCchHHHHHHHHHHHHHHHH
Confidence            56789999998888764   24578999999533211                     1234569999999998888764


Q ss_pred             ---HhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC
Q 030406           79 ---VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        79 ---~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                         +..|++++++||+.+..+.....  ..                ......+..+|+++.++.++..+.
T Consensus       169 ~~~~~~gi~v~~v~pg~~~t~~~~~~--~~----------------~~~~~~~~~~d~a~~~~~~l~~~~  220 (237)
T PRK07326        169 LDLRQYGIKVSTIMPGSVATHFNGHT--PS----------------EKDAWKIQPEDIAQLVLDLLKMPP  220 (237)
T ss_pred             HHhcccCcEEEEEeeccccCcccccc--cc----------------hhhhccCCHHHHHHHHHHHHhCCc
Confidence               33589999999999866532111  00                000113779999999999998764

>PRK08703 short chain dehydrogenase; Provisional

Probab=98.15  E-value=5.3e-05  Score=54.61  Aligned_cols=104  Identities=13%  Similarity=0.001  Sum_probs=72.2

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.+    .+..++|++||..+..                     +......|+.+|...+.+++.+
T Consensus       116 ~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~---------------------~~~~~~~Y~~sKaa~~~~~~~l  174 (239)
T PRK08703        116 YRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET---------------------PKAYWGGFGASKAALNYLCKVA  174 (239)
T ss_pred             HHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc---------------------CCCCccchHHhHHHHHHHHHHH
Confidence            57899998888888754    3456899998843221                     1113356999999999998887


Q ss_pred             HHhc----CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           78 AVAR----GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        78 ~~~~----~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      +.+.    ++++.+++||.+.++......           .+      .....+...+|++..+..++..
T Consensus       175 a~e~~~~~~i~v~~v~pG~v~t~~~~~~~-----------~~------~~~~~~~~~~~~~~~~~~~~~~  227 (239)
T PRK08703        175 ADEWERFGNLRANVLVPGPINSPQRIKSH-----------PG------EAKSERKSYGDVLPAFVWWASA  227 (239)
T ss_pred             HHHhccCCCeEEEEEecCcccCccccccC-----------CC------CCccccCCHHHHHHHHHHHhCc
Confidence            7664    588999999999876422110           01      1112346889999999888874

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.14  E-value=0.00011  Score=53.60  Aligned_cols=110  Identities=16%  Similarity=0.020  Sum_probs=71.8

Q ss_pred             chhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+++++...    +.+++|++||. ..+.     +               ......|+.+|.+.+.+++.+
T Consensus       123 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~-~~~~-----~---------------~~~~~~Y~~sK~a~~~~~~~l  181 (256)
T PRK12748        123 YAVNVRATMLLSSAFAKQYDGKAGGRIINLTSG-QSLG-----P---------------MPDELAYAATKGAIEAFTKSL  181 (256)
T ss_pred             HHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCc-cccC-----C---------------CCCchHHHHHHHHHHHHHHHH
Confidence            568999999999988642    34689999994 3221     0               113356999999999998876


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   .++++..++|+.+..+....    .   .........   .  ...+...+|+++++..++...
T Consensus       182 a~e~~~~~i~v~~i~Pg~~~t~~~~~----~---~~~~~~~~~---~--~~~~~~~~~~a~~~~~l~~~~  239 (256)
T PRK12748        182 APELAEKGITVNAVNPGPTDTGWITE----E---LKHHLVPKF---P--QGRVGEPVDAARLIAFLVSEE  239 (256)
T ss_pred             HHHHHHhCeEEEEEEeCcccCCCCCh----h---HHHhhhccC---C--CCCCcCHHHHHHHHHHHhCcc
Confidence            554   47999999999875443111    0   111111111   1  112345799999998887653

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=98.14  E-value=3.8e-05  Score=55.58  Aligned_cols=116  Identities=19%  Similarity=0.136  Sum_probs=73.0

Q ss_pred             chhHHHHHHHHHHHHHh-CC------CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE-AK------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAA   74 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~-~~------~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~   74 (178)
                      +++|+.++.++++++.+ ..      -.++|++||.++.++..                    .....|+.+|...+.+.
T Consensus       109 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~--------------------~~~~~Y~~sK~~~~~~~  168 (248)
T PRK06947        109 FDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP--------------------NEYVDYAGSKGAVDTLT  168 (248)
T ss_pred             HHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC--------------------CCCcccHhhHHHHHHHH
Confidence            56899999888755443 21      23699999965554321                    11245999999999998


Q ss_pred             HHHHHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC
Q 030406           75 WEEAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        75 ~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                      +.++.+.   +++++++|||.+..+.........   .........+     ..-+..++|+++.++.++..+.
T Consensus       169 ~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~---~~~~~~~~~~-----~~~~~~~e~va~~~~~l~~~~~  234 (248)
T PRK06947        169 LGLAKELGPHGVRVNAVRPGLIETEIHASGGQPG---RAARLGAQTP-----LGRAGEADEVAETIVWLLSDAA  234 (248)
T ss_pred             HHHHHHhhhhCcEEEEEeccCcccccccccCCHH---HHHHHhhcCC-----CCCCcCHHHHHHHHHHHcCccc
Confidence            8776654   799999999999765321110010   1111111111     1113578999999999887653

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=98.14  E-value=7.2e-05  Score=53.84  Aligned_cols=112  Identities=18%  Similarity=0.139  Sum_probs=73.5

Q ss_pred             chhHHHHHHHHHHHHH-----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA-----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~-----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++.     +.+..++|++||.+++++.+                     ....|+.+|...+.+.+.
T Consensus       104 ~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~---------------------~~~~Y~~sK~a~~~~~~~  162 (239)
T TIGR01831       104 IHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNR---------------------GQVNYSAAKAGLIGATKA  162 (239)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCC---------------------CCcchHHHHHHHHHHHHH
Confidence            5689999999988763     23456899999965655321                     235699999998888776


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      ++.+   .|+++..++|+.+-++....    .......... ..+     ..-+...+|+++++..++..+
T Consensus       163 la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~-~~~-----~~~~~~~~~va~~~~~l~~~~  223 (239)
T TIGR01831       163 LAVELAKRKITVNCIAPGLIDTEMLAE----VEHDLDEALK-TVP-----MNRMGQPAEVASLAGFLMSDG  223 (239)
T ss_pred             HHHHHhHhCeEEEEEEEccCccccchh----hhHHHHHHHh-cCC-----CCCCCCHHHHHHHHHHHcCch
Confidence            6544   47999999999986553211    1111111111 111     123457899999999998754

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>TIGR02415 23BDH acetoin reductases

Probab=98.13  E-value=2.7e-05  Score=56.54  Aligned_cols=124  Identities=17%  Similarity=0.089  Sum_probs=76.3

Q ss_pred             chhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++..+++++.+    .+ ..++|++||..+.++.                     ...+.|+.+|...+.+++.
T Consensus       105 ~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~  163 (254)
T TIGR02415       105 YNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN---------------------PILSAYSSTKFAVRGLTQT  163 (254)
T ss_pred             HhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC---------------------CCCcchHHHHHHHHHHHHH
Confidence            56899998877766653    23 3689999996554431                     1346799999999999887


Q ss_pred             HHHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCcccc-------CCCCcccccHHHHHHHHHHhhcCCCC
Q 030406           77 EAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY-------ANSVQAYVHVRDVALAHILVYETPSA  146 (178)
Q Consensus        77 ~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~i~v~D~a~~~~~~~~~~~~  146 (178)
                      ++.+.   ++.+.+++|+.+..+....    ......+ ..+.....       ......+..++|+++++..++.....
T Consensus       164 l~~~~~~~~i~v~~v~Pg~i~t~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  238 (254)
T TIGR02415       164 AAQELAPKGITVNAYCPGIVKTPMWEE----IDEETSE-IAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSD  238 (254)
T ss_pred             HHHHhcccCeEEEEEecCcccChhhhh----hhhhhhh-cccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccC
Confidence            66553   7899999999885432110    0000000 00000000       00122378889999999999987543


Q ss_pred             --CCcEE
Q 030406          147 --SGRYL  151 (178)
Q Consensus       147 --~~~~~  151 (178)
                        .|.++
T Consensus       239 ~~~g~~~  245 (254)
T TIGR02415       239 YITGQSI  245 (254)
T ss_pred             CccCcEE
Confidence              35554

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07578 short chain dehydrogenase; Provisional

Probab=98.13  E-value=4.7e-05  Score=53.38  Aligned_cols=111  Identities=21%  Similarity=0.197  Sum_probs=74.5

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...  +..+++++||..+..+                     ......|+.+|...+.+.+.++.
T Consensus        83 ~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~la~  141 (199)
T PRK07578         83 LQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEP---------------------IPGGASAATVNGALEGFVKAAAL  141 (199)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCC---------------------CCCchHHHHHHHHHHHHHHHHHH
Confidence            578999999999988752  3357999988533211                     12346799999999999888766


Q ss_pred             h--cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEE
Q 030406           80 A--RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYL  151 (178)
Q Consensus        80 ~--~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~  151 (178)
                      +  .|+.+..++||.+-.+.         .   ..  +.  .+  ....++..+|+++++..+++....+..++
T Consensus       142 e~~~gi~v~~i~Pg~v~t~~---------~---~~--~~--~~--~~~~~~~~~~~a~~~~~~~~~~~~g~~~~  197 (199)
T PRK07578        142 ELPRGIRINVVSPTVLTESL---------E---KY--GP--FF--PGFEPVPAARVALAYVRSVEGAQTGEVYK  197 (199)
T ss_pred             HccCCeEEEEEcCCcccCch---------h---hh--hh--cC--CCCCCCCHHHHHHHHHHHhccceeeEEec
Confidence            4  47888999999773211         0   00  00  00  11246789999999999998654443444

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.10  E-value=4e-05  Score=55.07  Aligned_cols=109  Identities=17%  Similarity=0.129  Sum_probs=72.0

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++.+...  ...++|++||..+.++.                    ..+...|+.+|...+.+++.++.
T Consensus       107 ~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~--------------------~~~~~~Y~~sK~~~~~~~~~~~~  166 (238)
T PRK05786        107 LTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKA--------------------SPDQLSYAVAKAGLAKAVEILAS  166 (238)
T ss_pred             HHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccC--------------------CCCchHHHHHHHHHHHHHHHHHH
Confidence            467888888888777653  23579999985332210                    12335699999999988887765


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +   .+++++++||++++++....   ..   + +.   .    ......++..+|+++++..++..+
T Consensus       167 ~~~~~gi~v~~i~pg~v~~~~~~~---~~---~-~~---~----~~~~~~~~~~~~va~~~~~~~~~~  220 (238)
T PRK05786        167 ELLGRGIRVNGIAPTTISGDFEPE---RN---W-KK---L----RKLGDDMAPPEDFAKVIIWLLTDE  220 (238)
T ss_pred             HHhhcCeEEEEEecCccCCCCCch---hh---h-hh---h----ccccCCCCCHHHHHHHHHHHhccc
Confidence            5   38999999999999863211   00   0 10   0    011123577899999999998653

>PRK06484 short chain dehydrogenase; Validated

Probab=98.10  E-value=6e-05  Score=60.60  Aligned_cols=127  Identities=17%  Similarity=0.139  Sum_probs=80.5

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...  +-.++|++||.++..+                     ......|+.+|...+.+.+.++.
T Consensus       372 ~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaal~~l~~~la~  430 (520)
T PRK06484        372 YDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLA---------------------LPPRNAYCASKAAVTMLSRSLAC  430 (520)
T ss_pred             HHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCC---------------------CCCCchhHHHHHHHHHHHHHHHH
Confidence            578999999999888763  3468999999644321                     12346799999999999888765


Q ss_pred             hc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEEEe
Q 030406           80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLCA  153 (178)
Q Consensus        80 ~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~  153 (178)
                      +.   |+++..++||.+..+.................+..      ....+..++|++++++.++....  ..| .+.+.
T Consensus       431 e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vd  504 (520)
T PRK06484        431 EWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRI------PLGRLGDPEEVAEAIAFLASPAASYVNGATLTVD  504 (520)
T ss_pred             HhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcC------CCCCCcCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence            54   79999999999966532110000000011111111      11225679999999999887542  344 44554


Q ss_pred             cC
Q 030406          154 ES  155 (178)
Q Consensus       154 ~~  155 (178)
                      +.
T Consensus       505 gg  506 (520)
T PRK06484        505 GG  506 (520)
T ss_pred             CC
Confidence            43

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=98.09  E-value=5.7e-05  Score=54.71  Aligned_cols=105  Identities=16%  Similarity=0.044  Sum_probs=70.7

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+.++||++||..+..+.                     .....|+.+|...+.+++.+
T Consensus       121 ~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~~  179 (247)
T PRK08945        121 MQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGR---------------------ANWGAYAVSKFATEGMMQVL  179 (247)
T ss_pred             HHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCC---------------------CCCcccHHHHHHHHHHHHHH
Confidence            5689999888887774    4567899999995333211                     13346999999999998887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      ..+.   ++.+.+++|+.+-++-....           . ..     .....+...+|+++.+..++..+
T Consensus       180 ~~~~~~~~i~~~~v~pg~v~t~~~~~~-----------~-~~-----~~~~~~~~~~~~~~~~~~~~~~~  232 (247)
T PRK08945        180 ADEYQGTNLRVNCINPGGTRTAMRASA-----------F-PG-----EDPQKLKTPEDIMPLYLYLMGDD  232 (247)
T ss_pred             HHHhcccCEEEEEEecCCccCcchhhh-----------c-Cc-----ccccCCCCHHHHHHHHHHHhCcc
Confidence            6655   57788888887754311000           0 00     01123567899999999987544

>PRK12744 short chain dehydrogenase; Provisional

Probab=98.08  E-value=5.3e-05  Score=55.24  Aligned_cols=117  Identities=15%  Similarity=0.110  Sum_probs=72.5

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEe-ccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFT-SSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~-Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++..+++++...  ...+++++ ||..+.+.                      ...+.|+.+|.+.|.+.+.++
T Consensus       117 ~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~----------------------~~~~~Y~~sK~a~~~~~~~la  174 (257)
T PRK12744        117 FAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT----------------------PFYSAYAGSKAPVEHFTRAAS  174 (257)
T ss_pred             HhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC----------------------CCcccchhhHHHHHHHHHHHH
Confidence            568999999999988753  12456665 44222110                      123569999999999999887


Q ss_pred             Hhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           79 VAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        79 ~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      .+.   |+++.+++||.+..+...+......   ...........+...+.+.+++|+++++..++..
T Consensus       175 ~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  239 (257)
T PRK12744        175 KEFGARGISVTAVGPGPMDTPFFYPQEGAEA---VAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTD  239 (257)
T ss_pred             HHhCcCceEEEEEecCccccchhccccccch---hhcccccccccccccCCCCCHHHHHHHHHHhhcc
Confidence            764   6899999999986653211100000   0000000001111223578999999999999984

>PRK09242 tropinone reductase; Provisional

Probab=98.07  E-value=0.00012  Score=53.33  Aligned_cols=115  Identities=15%  Similarity=0.119  Sum_probs=74.5

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..++|++||..+..+                     ..+.+.|+.+|...+.+++.+
T Consensus       116 ~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~l  174 (257)
T PRK09242        116 FETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTH---------------------VRSGAPYGMTKAALLQMTRNL  174 (257)
T ss_pred             HhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCC---------------------CCCCcchHHHHHHHHHHHHHH
Confidence            5689999999988875    345678999999533221                     124467999999999998876


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   .++++..++|+.+.++....... ......... ...     ...-+...+|+++++..++...
T Consensus       175 a~e~~~~~i~v~~i~Pg~i~t~~~~~~~~-~~~~~~~~~-~~~-----~~~~~~~~~~va~~~~~l~~~~  237 (257)
T PRK09242        175 AVEWAEDGIRVNAVAPWYIRTPLTSGPLS-DPDYYEQVI-ERT-----PMRRVGEPEEVAAAVAFLCMPA  237 (257)
T ss_pred             HHHHHHhCeEEEEEEECCCCCcccccccC-ChHHHHHHH-hcC-----CCCCCcCHHHHHHHHHHHhCcc
Confidence            544   47999999999997764322111 111111111 111     1122446899999998888653

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.06  E-value=0.0003  Score=51.53  Aligned_cols=102  Identities=17%  Similarity=0.095  Sum_probs=73.6

Q ss_pred             cCchHHHHHHHHHHHHHHHHHhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCcc--ccCCCCcccccHHHHHHH
Q 030406           59 TKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK--TYANSVQAYVHVRDVALA  136 (178)
Q Consensus        59 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~v~D~a~~  136 (178)
                      ....|..+|..+|+.+..    .|++++++|+..+|......     .  +........+  ..+....+++..+|++.+
T Consensus       114 ~~~~~~~~~~~~e~~l~~----sg~~~t~lr~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~  182 (275)
T COG0702         114 SPSALARAKAAVEAALRS----SGIPYTTLRRAAFYLGAGAA-----F--IEAAEAAGLPVIPRGIGRLSPIAVDDVAEA  182 (275)
T ss_pred             CccHHHHHHHHHHHHHHh----cCCCeEEEecCeeeeccchh-----H--HHHHHhhCCceecCCCCceeeeEHHHHHHH
Confidence            457799999999999875    48999999977776543211     1  2222222222  234557899999999999


Q ss_pred             HHHhhcCCCCCC-cEEE-ecCccCHHHHHHHHHHhCC
Q 030406          137 HILVYETPSASG-RYLC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       137 ~~~~~~~~~~~~-~~~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                      +..++..+...+ .|.+ +++..+..++.+.+.+...
T Consensus       183 ~~~~l~~~~~~~~~~~l~g~~~~~~~~~~~~l~~~~g  219 (275)
T COG0702         183 LAAALDAPATAGRTYELAGPEALTLAELASGLDYTIG  219 (275)
T ss_pred             HHHHhcCCcccCcEEEccCCceecHHHHHHHHHHHhC
Confidence            999998876544 7755 5678999999999988763

>PRK07576 short chain dehydrogenase; Provisional

Probab=98.06  E-value=0.00021  Score=52.45  Aligned_cols=116  Identities=18%  Similarity=0.156  Sum_probs=73.8

Q ss_pred             chhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.++++++...   .-.++|++||..+..+                     ......|+.+|...+.+++.++
T Consensus       114 ~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~---------------------~~~~~~Y~asK~a~~~l~~~la  172 (264)
T PRK07576        114 VDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP---------------------MPMQAHVCAAKAGVDMLTRTLA  172 (264)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC---------------------CCCccHHHHHHHHHHHHHHHHH
Confidence            568999999999888642   2258999999533221                     1234679999999999998875


Q ss_pred             Hh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           79 VA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        79 ~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      .+   .|+.+..++|+.+.+.......... ...........     ....+...+|++++++.++..+
T Consensus       173 ~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~dva~~~~~l~~~~  235 (264)
T PRK07576        173 LEWGPEGIRVNSIVPGPIAGTEGMARLAPS-PELQAAVAQSV-----PLKRNGTKQDIANAALFLASDM  235 (264)
T ss_pred             HHhhhcCeEEEEEecccccCcHHHhhcccC-HHHHHHHHhcC-----CCCCCCCHHHHHHHHHHHcChh
Confidence            54   4788999999988653211100000 00111111111     1234677899999999999753

>PRK07856 short chain dehydrogenase; Provisional

Probab=98.06  E-value=0.00033  Score=50.91  Aligned_cols=115  Identities=17%  Similarity=0.044  Sum_probs=73.8

Q ss_pred             chhHHHHHHHHHHHHHh-----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE-----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~-----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++..     .+..++|++||..+..+                     ......|+.+|...+.+++.
T Consensus       103 ~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~l~~~  161 (252)
T PRK07856        103 VELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRP---------------------SPGTAAYGAAKAGLLNLTRS  161 (252)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCC---------------------CCCCchhHHHHHHHHHHHHH
Confidence            57899999999998864     23468999999544321                     12346799999999999998


Q ss_pred             HHHhcC--CcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           77 EAVARG--VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        77 ~~~~~~--~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      ++.+.+  +.+..++|+.+..+...... ...... .......     ....+..++|++++++.++..+
T Consensus       162 la~e~~~~i~v~~i~Pg~v~t~~~~~~~-~~~~~~-~~~~~~~-----~~~~~~~p~~va~~~~~L~~~~  224 (252)
T PRK07856        162 LAVEWAPKVRVNAVVVGLVRTEQSELHY-GDAEGI-AAVAATV-----PLGRLATPADIAWACLFLASDL  224 (252)
T ss_pred             HHHHhcCCeEEEEEEeccccChHHhhhc-cCHHHH-HHHhhcC-----CCCCCcCHHHHHHHHHHHcCcc
Confidence            877543  67778899988654311100 000111 1111111     1123567899999999888653

>PRK06198 short chain dehydrogenase; Provisional

Probab=98.05  E-value=6.3e-05  Score=54.84  Aligned_cols=117  Identities=13%  Similarity=0.030  Sum_probs=74.7

Q ss_pred             chhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++.+    .+ ..++|++||. +.++..                    ...+.|+.+|...|.+.+.
T Consensus       112 ~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~  170 (260)
T PRK06198        112 FAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSM-SAHGGQ--------------------PFLAAYCASKGALATLTRN  170 (260)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCc-ccccCC--------------------CCcchhHHHHHHHHHHHHH
Confidence            57899999999888754    22 3579999995 333210                    1346799999999999887


Q ss_pred             HHHhc---CCcEEEecCCceeCCCCCCC---ChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           77 EAVAR---GVDLVVVNPVLVLGPLLQST---VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        77 ~~~~~---~~~~~i~R~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      ++.+.   ++.+..++|+.+.++.....   .......+.......     .....+++++|+++++..++...
T Consensus       171 ~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~~~~~l~~~~  239 (260)
T PRK06198        171 AAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAAT-----QPFGRLLDPDEVARAVAFLLSDE  239 (260)
T ss_pred             HHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhcc-----CCccCCcCHHHHHHHHHHHcChh
Confidence            76544   58889999999987642110   000001111111111     11334688999999999988654

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=98.05  E-value=0.00012  Score=52.63  Aligned_cols=113  Identities=15%  Similarity=0.113  Sum_probs=70.5

Q ss_pred             chhHHHHHHHHHHH----HHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVA----AAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..++++    +++.+.+++|++||..+..+.                     .....|+.+|...+.+++.+
T Consensus       106 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~---------------------~~~~~y~~sk~a~~~~~~~l  164 (242)
T TIGR01829       106 IDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ---------------------FGQTNYSAAKAGMIGFTKAL  164 (242)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC---------------------CCcchhHHHHHHHHHHHHHH
Confidence            46788887775444    455677899999995333211                     13356999999888887776


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   .++++.+++|+.+.++......    ...........     ....+...+|+++++..++..+
T Consensus       165 a~~~~~~~i~v~~i~pg~~~t~~~~~~~----~~~~~~~~~~~-----~~~~~~~~~~~a~~~~~l~~~~  225 (242)
T TIGR01829       165 AQEGATKGVTVNTISPGYIATDMVMAMR----EDVLNSIVAQI-----PVGRLGRPEEIAAAVAFLASEE  225 (242)
T ss_pred             HHHhhhhCeEEEEEeeCCCcCccccccc----hHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHcCch
Confidence            543   4899999999999876432211    11111111111     1123456789999988777553

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12742 oxidoreductase; Provisional

Probab=98.05  E-value=0.00011  Score=52.70  Aligned_cols=113  Identities=14%  Similarity=0.085  Sum_probs=73.2

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++..++..+.+.  +..++|++||..+..     .               +..+...|+.+|...|.+++.++.
T Consensus       103 ~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-----~---------------~~~~~~~Y~~sKaa~~~~~~~la~  162 (237)
T PRK12742        103 FKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR-----M---------------PVAGMAAYAASKSALQGMARGLAR  162 (237)
T ss_pred             HhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc-----C---------------CCCCCcchHHhHHHHHHHHHHHHH
Confidence            578999999988666653  346899999943211     0               112456799999999999887665


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +   .|+.+.+++||.+..+..... ..    .........     ....+...+|+++++..++...
T Consensus       163 ~~~~~gi~v~~v~Pg~~~t~~~~~~-~~----~~~~~~~~~-----~~~~~~~p~~~a~~~~~l~s~~  220 (237)
T PRK12742        163 DFGPRGITINVVQPGPIDTDANPAN-GP----MKDMMHSFM-----AIKRHGRPEEVAGMVAWLAGPE  220 (237)
T ss_pred             HHhhhCeEEEEEecCcccCCccccc-cH----HHHHHHhcC-----CCCCCCCHHHHHHHHHHHcCcc
Confidence            4   479999999998865432111 01    111111111     1123568999999999888654

>PRK06114 short chain dehydrogenase; Provisional

Probab=98.04  E-value=0.00016  Score=52.60  Aligned_cols=116  Identities=15%  Similarity=0.176  Sum_probs=73.4

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+++++.    +.+..++|++||.++..+.+.                   .+...|+.+|...+.+.+.+
T Consensus       114 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------------------~~~~~Y~~sKaa~~~l~~~l  174 (254)
T PRK06114        114 MDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG-------------------LLQAHYNASKAGVIHLSKSL  174 (254)
T ss_pred             HhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC-------------------CCcchHHHHHHHHHHHHHHH
Confidence            5688899877766653    445578999999654432110                   12357999999999998887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   .|+++.+++||.+..+.....  ..... ........+     ..-+..++|+++.++.++...
T Consensus       175 a~e~~~~gi~v~~v~PG~i~t~~~~~~--~~~~~-~~~~~~~~p-----~~r~~~~~dva~~~~~l~s~~  236 (254)
T PRK06114        175 AMEWVGRGIRVNSISPGYTATPMNTRP--EMVHQ-TKLFEEQTP-----MQRMAKVDEMVGPAVFLLSDA  236 (254)
T ss_pred             HHHHhhcCeEEEEEeecCccCcccccc--cchHH-HHHHHhcCC-----CCCCcCHHHHHHHHHHHcCcc
Confidence            653   479999999999876542211  01111 111111111     122457899999999988653

>PRK07832 short chain dehydrogenase; Provisional

Probab=98.03  E-value=0.00018  Score=52.96  Aligned_cols=114  Identities=18%  Similarity=0.104  Sum_probs=71.8

Q ss_pred             chhHHHHHHHHHHHHHh-----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE-----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~-----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++..     ....++|++||..+..+.                     .....|+.+|...+.+.+.
T Consensus       106 ~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~  164 (272)
T PRK07832        106 VDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVAL---------------------PWHAAYSASKFGLRGLSEV  164 (272)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCC---------------------CCCcchHHHHHHHHHHHHH
Confidence            57899999999998752     224689999995332210                     1235699999988777665


Q ss_pred             HH---HhcCCcEEEecCCceeCCCCCCCC----hhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           77 EA---VARGVDLVVVNPVLVLGPLLQSTV----NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        77 ~~---~~~~~~~~i~R~~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      .+   ...++++++++||.+.++......    ........... .      ......+..+|+|++++.+++.
T Consensus       165 l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~vA~~~~~~~~~  231 (272)
T PRK07832        165 LRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWV-D------RFRGHAVTPEKAAEKILAGVEK  231 (272)
T ss_pred             HHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHH-H------hcccCCCCHHHHHHHHHHHHhc
Confidence            44   346899999999999876422100    00000001110 0      0112357899999999999964

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=98.03  E-value=0.00017  Score=52.86  Aligned_cols=117  Identities=10%  Similarity=0.037  Sum_probs=75.6

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+++++..    .+..+||++||..+.++.                     .+...|+.+|...+.+.+.+
T Consensus       115 ~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~~sKaal~~l~~~l  173 (265)
T PRK07097        115 IDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGR---------------------ETVSAYAAAKGGLKMLTKNI  173 (265)
T ss_pred             HHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCC---------------------CCCccHHHHHHHHHHHHHHH
Confidence            56888888877777653    456789999996444321                     23467999999999999988


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCCh----hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVN----ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+.   |+.+..++||.+..+.......    .....+........     ....+...+|+++.+..++...
T Consensus       174 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~dva~~~~~l~~~~  242 (265)
T PRK07097        174 ASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKT-----PAARWGDPEDLAGPAVFLASDA  242 (265)
T ss_pred             HHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcC-----CccCCcCHHHHHHHHHHHhCcc
Confidence            7664   8999999999997764211000    00000111111111     1123567899999999998763

>PRK08265 short chain dehydrogenase; Provisional

Probab=98.02  E-value=0.00014  Score=53.19  Aligned_cols=117  Identities=13%  Similarity=0.109  Sum_probs=73.1

Q ss_pred             chhHHHHHHHHHHHHHh---CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE---AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.++++++..   .+-.++|++||.++.++.                     .....|+.+|...+.+.+.++
T Consensus       107 ~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~---------------------~~~~~Y~asKaa~~~~~~~la  165 (261)
T PRK08265        107 LDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQ---------------------TGRWLYPASKAAIRQLTRSMA  165 (261)
T ss_pred             HhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC---------------------CCCchhHHHHHHHHHHHHHHH
Confidence            56799999888887764   234689999996554321                     123569999999999988776


Q ss_pred             Hh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           79 VA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        79 ~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      .+   .|+++..++||.+..+-................ ...    ....-+...+|+++++..++..+
T Consensus       166 ~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~-~~~----~p~~r~~~p~dva~~~~~l~s~~  229 (261)
T PRK08265        166 MDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVA-APF----HLLGRVGDPEEVAQVVAFLCSDA  229 (261)
T ss_pred             HHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhh-ccc----CCCCCccCHHHHHHHHHHHcCcc
Confidence            54   479999999998755421110000000000110 000    01122467899999999998754

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=98.01  E-value=5.7e-05  Score=55.73  Aligned_cols=116  Identities=13%  Similarity=0.071  Sum_probs=72.5

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+++++    ++.+..++|++||..+..+                     ..+...|+.+|...+.+++.+
T Consensus       130 ~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~l~~~l  188 (278)
T PRK08277        130 FDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTP---------------------LTKVPAYSAAKAAISNFTQWL  188 (278)
T ss_pred             HhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCC---------------------CCCCchhHHHHHHHHHHHHHH
Confidence            467888887665544    4445678999999533211                     123457999999999999887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCCh---hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVN---ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      +.+.   |+++..++|+.+..+.......   ..............     ...-+...+|++++++.++..
T Consensus       189 a~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-----p~~r~~~~~dva~~~~~l~s~  255 (278)
T PRK08277        189 AVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHT-----PMGRFGKPEELLGTLLWLADE  255 (278)
T ss_pred             HHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccC-----CccCCCCHHHHHHHHHHHcCc
Confidence            7665   7899999999997763211000   00000111111111     122356789999999998875

>PRK07814 short chain dehydrogenase; Provisional

Probab=98.01  E-value=0.00013  Score=53.47  Aligned_cols=115  Identities=16%  Similarity=0.089  Sum_probs=74.7

Q ss_pred             chhHHHHHHHHHHHHHh-----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE-----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~-----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++..     .+..++|++||..+..+                     ..+.+.|+.+|...+.+++.
T Consensus       115 ~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~  173 (263)
T PRK07814        115 FTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLA---------------------GRGFAAYGTAKAALAHYTRL  173 (263)
T ss_pred             HHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCC---------------------CCCCchhHHHHHHHHHHHHH
Confidence            57899999999999874     35578999999544321                     12446799999999999998


Q ss_pred             HHHhc--CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           77 EAVAR--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        77 ~~~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      ++.+.  ++.+..++|+.+..+..... ... ..+.....+..     ....+..++|++++++.++...
T Consensus       174 ~~~e~~~~i~v~~i~Pg~v~t~~~~~~-~~~-~~~~~~~~~~~-----~~~~~~~~~~va~~~~~l~~~~  236 (263)
T PRK07814        174 AALDLCPRIRVNAIAPGSILTSALEVV-AAN-DELRAPMEKAT-----PLRRLGDPEDIAAAAVYLASPA  236 (263)
T ss_pred             HHHHHCCCceEEEEEeCCCcCchhhhc-cCC-HHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHcCcc
Confidence            77654  46777888988754421110 000 11111111211     1223567899999999988653

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.00  E-value=0.00012  Score=50.14  Aligned_cols=123  Identities=18%  Similarity=0.161  Sum_probs=85.1

Q ss_pred             HHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcCCcEE
Q 030406            7 IGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGVDLV   86 (178)
Q Consensus         7 ~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~   86 (178)
                      .....|++.++.+++.|++.++..++.|-++..     .-.+      .|.-|...|..++..+|.+-. +..+.+++|+
T Consensus        83 k~~~~li~~l~~agv~RllVVGGAGSL~id~g~-----rLvD------~p~fP~ey~~~A~~~ae~L~~-Lr~~~~l~WT  150 (211)
T COG2910          83 KSIEALIEALKGAGVPRLLVVGGAGSLEIDEGT-----RLVD------TPDFPAEYKPEALAQAEFLDS-LRAEKSLDWT  150 (211)
T ss_pred             HHHHHHHHHHhhcCCeeEEEEcCccceEEcCCc-----eeec------CCCCchhHHHHHHHHHHHHHH-HhhccCcceE
Confidence            345678888888899999999997777743331     1112      244577778888888885422 2334469999


Q ss_pred             EecCCceeCCCCCCCChhhHHHHHHHHhCCccc-cCCCCcccccHHHHHHHHHHhhcCCCCCC-cE
Q 030406           87 VVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-YANSVQAYVHVRDVALAHILVYETPSASG-RY  150 (178)
Q Consensus        87 i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~  150 (178)
                      .+-|+..|-|+....         +...|+... .....-++|...|.|-+++..++.+.... +|
T Consensus       151 fvSPaa~f~PGerTg---------~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h~rqRf  207 (211)
T COG2910         151 FVSPAAFFEPGERTG---------NYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQHIRQRF  207 (211)
T ss_pred             EeCcHHhcCCccccC---------ceEeccceEEEcCCCceeeeHHHHHHHHHHHHhcccccceee
Confidence            999999998864332         222233322 34456789999999999999999987654 44

>PRK06949 short chain dehydrogenase; Provisional

Probab=97.98  E-value=0.00013  Score=53.08  Aligned_cols=121  Identities=14%  Similarity=0.139  Sum_probs=76.5

Q ss_pred             chhHHHHHHHHHHHHHh----CC--------CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK--------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAV   69 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~--------~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~   69 (178)
                      +++|+.++.++++++..    ..        ..++|++||..+..+                     ......|+.+|..
T Consensus       114 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------------------~~~~~~Y~~sK~a  172 (258)
T PRK06949        114 FDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV---------------------LPQIGLYCMSKAA  172 (258)
T ss_pred             HhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC---------------------CCCccHHHHHHHH
Confidence            56788888888887752    21        258999999533211                     1234679999999


Q ss_pred             HHHHHHHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC-
Q 030406           70 AEKAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS-  145 (178)
Q Consensus        70 ~E~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-  145 (178)
                      .+.+++.++.+   .++++.+++||.+.++........  . .........     ....+...+|+++++..++..+. 
T Consensus       173 ~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~--~-~~~~~~~~~-----~~~~~~~p~~~~~~~~~l~~~~~~  244 (258)
T PRK06949        173 VVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWET--E-QGQKLVSML-----PRKRVGKPEDLDGLLLLLAADESQ  244 (258)
T ss_pred             HHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccCh--H-HHHHHHhcC-----CCCCCcCHHHHHHHHHHHhChhhc
Confidence            99998887655   479999999999987653221100  0 011111111     11245568999999999887532 


Q ss_pred             -CCCcEE
Q 030406          146 -ASGRYL  151 (178)
Q Consensus       146 -~~~~~~  151 (178)
                       ..|.++
T Consensus       245 ~~~G~~i  251 (258)
T PRK06949        245 FINGAII  251 (258)
T ss_pred             CCCCcEE
Confidence             345443

>PRK06398 aldose dehydrogenase; Validated

Probab=97.97  E-value=0.00022  Score=52.11  Aligned_cols=117  Identities=13%  Similarity=0.069  Sum_probs=73.2

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+++++.+    .+..++|++||..+..+                     ..+...|+.+|...+.+.+.+
T Consensus       100 ~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~~sKaal~~~~~~l  158 (258)
T PRK06398        100 INVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAV---------------------TRNAAAYVTSKHAVLGLTRSI  158 (258)
T ss_pred             HHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccC---------------------CCCCchhhhhHHHHHHHHHHH
Confidence            57899999888887753    45679999999533211                     124467999999999999988


Q ss_pred             HHhc--CCcEEEecCCceeCCCCCCC-------ChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVAR--GVDLVVVNPVLVLGPLLQST-------VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~~--~~~~~i~R~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+.  ++.+..++||.+-.+-....       ...............     .....+..++|++++++.++...
T Consensus       159 a~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~p~eva~~~~~l~s~~  229 (258)
T PRK06398        159 AVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEM-----HPMKRVGKPEEVAYVVAFLASDL  229 (258)
T ss_pred             HHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhc-----CCcCCCcCHHHHHHHHHHHcCcc
Confidence            7764  37888899998854321100       000000000000000     11223567999999999888653

>PRK06197 short chain dehydrogenase; Provisional

Probab=97.95  E-value=7e-05  Score=56.11  Aligned_cols=87  Identities=18%  Similarity=0.095  Sum_probs=55.0

Q ss_pred             chhHHHH----HHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIG----TKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~----t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.+    +..++..+++.+..++|++||.+...... . +   .++..+.   .+..+...|+.+|.+.+.+.+.+
T Consensus       121 ~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~-~-~---~~~~~~~---~~~~~~~~Y~~SK~a~~~~~~~l  192 (306)
T PRK06197        121 FGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAA-I-H---FDDLQWE---RRYNRVAAYGQSKLANLLFTYEL  192 (306)
T ss_pred             hhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCC-C-C---ccccCcc---cCCCcHHHHHHHHHHHHHHHHHH
Confidence            5688888    66677777776667999999953322111 1 1   1111110   01245678999999999999887


Q ss_pred             HHhc---CCcEEE--ecCCceeCC
Q 030406           78 AVAR---GVDLVV--VNPVLVLGP   96 (178)
Q Consensus        78 ~~~~---~~~~~i--~R~~~v~G~   96 (178)
                      +.+.   ++++.+  +.||.+-.+
T Consensus       193 a~~l~~~~i~v~~v~~~PG~v~T~  216 (306)
T PRK06197        193 QRRLAAAGATTIAVAAHPGVSNTE  216 (306)
T ss_pred             HHHhhcCCCCeEEEEeCCCcccCc
Confidence            7654   555544  479988543

>PRK08589 short chain dehydrogenase; Validated

Probab=97.95  E-value=0.00025  Score=52.28  Aligned_cols=120  Identities=16%  Similarity=0.090  Sum_probs=70.7

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+++++.    +.+ .++|++||..+..+.                     .....|+.+|...+.+++.+
T Consensus       111 ~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~l~~~l  168 (272)
T PRK08589        111 MAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAAD---------------------LYRSGYNAAKGAVINFTKSI  168 (272)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCC---------------------CCCchHHHHHHHHHHHHHHH
Confidence            4678888876666654    334 689999995433211                     12357999999999999987


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+.   |+.+..+.||.+..+-....................... ....-+..++|++++++.++..+
T Consensus       169 a~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~va~~~~~l~s~~  237 (272)
T PRK08589        169 AIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWM-TPLGRLGKPEEVAKLVVFLASDD  237 (272)
T ss_pred             HHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhcc-CCCCCCcCHHHHHHHHHHHcCch
Confidence            6543   799999999998654211100000000000000000000 01122567999999999988653

>PRK06924 short chain dehydrogenase; Provisional

Probab=97.94  E-value=0.00015  Score=52.58  Aligned_cols=122  Identities=16%  Similarity=0.067  Sum_probs=71.1

Q ss_pred             chhHHHHHHHHHHHH----HhC-CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEA-KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++..+++++    ++. +.+++|++||. ....                    +..+...|+.+|...+.+++.
T Consensus       109 ~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~-~~~~--------------------~~~~~~~Y~~sKaa~~~~~~~  167 (251)
T PRK06924        109 VHLNLLAPMILTSTFMKHTKDWKVDKRVINISSG-AAKN--------------------PYFGWSAYCSSKAGLDMFTQT  167 (251)
T ss_pred             hccceehHHHHHHHHHHHHhccCCCceEEEecch-hhcC--------------------CCCCcHHHhHHHHHHHHHHHH
Confidence            456777765555444    343 34689999994 3210                    113456799999999999988


Q ss_pred             HHHh-----cCCcEEEecCCceeCCCCCCC---ChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC-CCCC
Q 030406           77 EAVA-----RGVDLVVVNPVLVLGPLLQST---VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET-PSAS  147 (178)
Q Consensus        77 ~~~~-----~~~~~~i~R~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~-~~~~  147 (178)
                      ++.+     .++.+..++||.+-.+.....   .......+......    .+  ..-+..++|+++.++.++.. ....
T Consensus       168 la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~dva~~~~~l~~~~~~~~  241 (251)
T PRK06924        168 VATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITL----KE--EGKLLSPEYVAKALRNLLETEDFPN  241 (251)
T ss_pred             HHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHH----hh--cCCcCCHHHHHHHHHHHHhcccCCC
Confidence            7655     368888999997753321000   00000000011100    00  11257899999999999876 3344


Q ss_pred             CcE
Q 030406          148 GRY  150 (178)
Q Consensus       148 ~~~  150 (178)
                      |.+
T Consensus       242 G~~  244 (251)
T PRK06924        242 GEV  244 (251)
T ss_pred             CCE
Confidence            443

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=97.93  E-value=5.1e-05  Score=51.59  Aligned_cols=71  Identities=21%  Similarity=0.161  Sum_probs=56.6

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.++++++++.+.+++|++||..+.++.                     .....|+.+|...+.+++. ....
T Consensus       109 ~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~---------------------~~~~~y~~sk~~~~~~~~~-~~~~  166 (180)
T smart00822      109 LAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGN---------------------PGQANYAAANAFLDALAAH-RRAR  166 (180)
T ss_pred             hchHhHHHHHHHHHhccCCcceEEEEccHHHhcCC---------------------CCchhhHHHHHHHHHHHHH-HHhc
Confidence            57899999999999988888899999996555432                     1235699999999999965 4567


Q ss_pred             CCcEEEecCCcee
Q 030406           82 GVDLVVVNPVLVL   94 (178)
Q Consensus        82 ~~~~~i~R~~~v~   94 (178)
                      +++.+.+.|+.+-
T Consensus       167 ~~~~~~~~~g~~~  179 (180)
T smart00822      167 GLPATSINWGAWA  179 (180)
T ss_pred             CCceEEEeecccc
Confidence            8999999888653

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.91  E-value=0.00029  Score=53.54  Aligned_cols=111  Identities=16%  Similarity=0.123  Sum_probs=71.8

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++.+++.    +.+..++|++||..+..+.                     .....|+.+|...+.+.+.+
T Consensus       112 ~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~---------------------p~~~~Y~asKaal~~~~~sL  170 (330)
T PRK06139        112 IQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ---------------------PYAAAYSASKFGLRGFSEAL  170 (330)
T ss_pred             HHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC---------------------CCchhHHHHHHHHHHHHHHH
Confidence            5789999888777764    4445689999995432210                     12357999999877766655


Q ss_pred             HHh----cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC
Q 030406           78 AVA----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        78 ~~~----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                      ..+    .++.+..+.|+.+-.+......        .. .+..   ......+++.+|+|++++.+++.+.
T Consensus       171 ~~El~~~~gI~V~~v~Pg~v~T~~~~~~~--------~~-~~~~---~~~~~~~~~pe~vA~~il~~~~~~~  230 (330)
T PRK06139        171 RGELADHPDIHVCDVYPAFMDTPGFRHGA--------NY-TGRR---LTPPPPVYDPRRVAKAVVRLADRPR  230 (330)
T ss_pred             HHHhCCCCCeEEEEEecCCccCccccccc--------cc-cccc---ccCCCCCCCHHHHHHHHHHHHhCCC
Confidence            443    3789999999999766422110        00 0110   0112346789999999999998764

>PRK07677 short chain dehydrogenase; Provisional

Probab=97.90  E-value=0.00035  Score=50.75  Aligned_cols=116  Identities=12%  Similarity=-0.041  Sum_probs=71.4

Q ss_pred             chhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++.+    .+ ..++|++||..+..+                     ......|+.+|...+.+.+.
T Consensus       106 ~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~---------------------~~~~~~Y~~sKaa~~~~~~~  164 (252)
T PRK07677        106 IDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDA---------------------GPGVIHSAAAKAGVLAMTRT  164 (252)
T ss_pred             HhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccC---------------------CCCCcchHHHHHHHHHHHHH
Confidence            57899999999988843    22 358999998422110                     01234699999999999887


Q ss_pred             HHHh----cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           77 EAVA----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        77 ~~~~----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      .+.+    +|+++..++||.+..+......... ....+......     ...-+...+|+++++..++..+
T Consensus       165 la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~va~~~~~l~~~~  230 (252)
T PRK07677        165 LAVEWGRKYGIRVNAIAPGPIERTGGADKLWES-EEAAKRTIQSV-----PLGRLGTPEEIAGLAYFLLSDE  230 (252)
T ss_pred             HHHHhCcccCeEEEEEeecccccccccccccCC-HHHHHHHhccC-----CCCCCCCHHHHHHHHHHHcCcc
Confidence            5544    4789999999998743211100000 11111111111     1123667899999988877643

>PRK07478 short chain dehydrogenase; Provisional

Probab=97.90  E-value=0.00034  Score=50.86  Aligned_cols=116  Identities=13%  Similarity=0.069  Sum_probs=71.9

Q ss_pred             chhHHHHHHHHHH----HHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIV----AAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~----~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+    .+++.+..++|++||..+ +...                   ......|+.+|.+.+.+.+.+
T Consensus       112 ~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~-~~~~-------------------~~~~~~Y~~sK~a~~~~~~~l  171 (254)
T PRK07478        112 LATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVG-HTAG-------------------FPGMAAYAASKAGLIGLTQVL  171 (254)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHh-hccC-------------------CCCcchhHHHHHHHHHHHHHH
Confidence            5788887766655    444556678999999533 2100                   123467999999999999887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+.   |+.+..++||.+-.+-.... ... ...........     ....+..++|+++.++.++..+
T Consensus       172 a~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~-~~~~~~~~~~~-----~~~~~~~~~~va~~~~~l~s~~  234 (254)
T PRK07478        172 AAEYGAQGIRVNALLPGGTDTPMGRAM-GDT-PEALAFVAGLH-----ALKRMAQPEEIAQAALFLASDA  234 (254)
T ss_pred             HHHHhhcCEEEEEEeeCcccCcccccc-cCC-HHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHcCch
Confidence            6654   68999999999854421110 000 01111111111     1123567999999999988654

>PRK08226 short chain dehydrogenase; Provisional

Probab=97.89  E-value=0.00038  Score=50.87  Aligned_cols=125  Identities=18%  Similarity=0.168  Sum_probs=76.7

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..++|++||..+...                    +......|+.+|...+.+.+.+
T Consensus       110 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~l  169 (263)
T PRK08226        110 IDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV--------------------ADPGETAYALTKAAIVGLTKSL  169 (263)
T ss_pred             HhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc--------------------CCCCcchHHHHHHHHHHHHHHH
Confidence            56899999999888753    34568999998432110                    0013457999999999999887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCC----hhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTV----NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG  148 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~  148 (178)
                      +.+.   ++++..++||.+.++-.....    ...............     ....+...+|+++++..++...  ...|
T Consensus       170 a~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-----p~~~~~~~~~va~~~~~l~~~~~~~~~g  244 (263)
T PRK08226        170 AVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAI-----PLRRLADPLEVGELAAFLASDESSYLTG  244 (263)
T ss_pred             HHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccC-----CCCCCCCHHHHHHHHHHHcCchhcCCcC
Confidence            7654   789999999998765321100    000111111111111     1123568999999998887543  3344


Q ss_pred             cEE
Q 030406          149 RYL  151 (178)
Q Consensus       149 ~~~  151 (178)
                      ..+
T Consensus       245 ~~i  247 (263)
T PRK08226        245 TQN  247 (263)
T ss_pred             ceE
Confidence            443

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.88  E-value=0.00036  Score=50.86  Aligned_cols=115  Identities=10%  Similarity=-0.006  Sum_probs=72.8

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+++++.    +.+..++|++||..+..+.                     .....|+.+|.+.+.+.+.+
T Consensus       119 ~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~l  177 (258)
T PRK06935        119 MDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGG---------------------KFVPAYTASKHGVAGLTKAF  177 (258)
T ss_pred             HHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCC---------------------CCchhhHHHHHHHHHHHHHH
Confidence            4678888777776654    4456789999995332211                     12357999999999999887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +++.   |+++.+++||.+-.+..... ...-....... ...     ....+...+|+++.+..++...
T Consensus       178 a~e~~~~gi~v~~i~PG~v~t~~~~~~-~~~~~~~~~~~-~~~-----~~~~~~~~~dva~~~~~l~s~~  240 (258)
T PRK06935        178 ANELAAYNIQVNAIAPGYIKTANTAPI-RADKNRNDEIL-KRI-----PAGRWGEPDDLMGAAVFLASRA  240 (258)
T ss_pred             HHHhhhhCeEEEEEEeccccccchhhc-ccChHHHHHHH-hcC-----CCCCCCCHHHHHHHHHHHcChh
Confidence            7654   79999999998865432110 00000001111 111     1234677899999998888643

>PRK06953 short chain dehydrogenase; Provisional

Probab=97.87  E-value=0.00052  Score=48.90  Aligned_cols=77  Identities=16%  Similarity=0.087  Sum_probs=56.3

Q ss_pred             chhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.++++++.+.   +..+++++||..+.++...                  ..+...|+.+|...+.+++.++
T Consensus       100 ~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------------~~~~~~Y~~sK~a~~~~~~~~~  161 (222)
T PRK06953        100 MHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT------------------GTTGWLYRASKAALNDALRAAS  161 (222)
T ss_pred             HhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc------------------CCCccccHHhHHHHHHHHHHHh
Confidence            578999999999998752   2347899988545543210                  0122469999999999999876


Q ss_pred             Hhc-CCcEEEecCCceeCC
Q 030406           79 VAR-GVDLVVVNPVLVLGP   96 (178)
Q Consensus        79 ~~~-~~~~~i~R~~~v~G~   96 (178)
                      .+. ++++..++|+.+..+
T Consensus       162 ~~~~~i~v~~v~Pg~i~t~  180 (222)
T PRK06953        162 LQARHATCIALHPGWVRTD  180 (222)
T ss_pred             hhccCcEEEEECCCeeecC
Confidence            654 678899999988644

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.87  E-value=0.0008  Score=50.53  Aligned_cols=135  Identities=18%  Similarity=0.155  Sum_probs=81.9

Q ss_pred             chhHHHHHHHHHHHHHhC-----------CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA-----------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVA   70 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-----------~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~   70 (178)
                      +++|+.++.++++++...           ...++|++||.++..+.                     .....|+.+|...
T Consensus       117 ~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaal  175 (306)
T PRK07792        117 IAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP---------------------VGQANYGAAKAGI  175 (306)
T ss_pred             HHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC---------------------CCCchHHHHHHHH
Confidence            578999999999887521           12489999995443221                     1335699999999


Q ss_pred             HHHHHHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--
Q 030406           71 EKAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--  145 (178)
Q Consensus        71 E~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--  145 (178)
                      +.+.+.++.+   +|+.+..+.|+.  ......    .   +.    ...+.........+.++|++.++..++....  
T Consensus       176 ~~l~~~la~e~~~~gI~vn~i~Pg~--~t~~~~----~---~~----~~~~~~~~~~~~~~~pe~va~~v~~L~s~~~~~  242 (306)
T PRK07792        176 TALTLSAARALGRYGVRANAICPRA--RTAMTA----D---VF----GDAPDVEAGGIDPLSPEHVVPLVQFLASPAAAE  242 (306)
T ss_pred             HHHHHHHHHHhhhcCeEEEEECCCC--CCchhh----h---hc----cccchhhhhccCCCCHHHHHHHHHHHcCccccC
Confidence            9998877654   578888888862  111000    0   00    0000000112334679999999988775421  


Q ss_pred             CCC-cEEEe-------------------cCccCHHHHHHHHHHhC
Q 030406          146 ASG-RYLCA-------------------ESVLHRGEVVEILAKFF  170 (178)
Q Consensus       146 ~~~-~~~~~-------------------~~~~s~~e~~~~i~~~~  170 (178)
                      ..| .+.+.                   ++.++..|+.+.+.+.+
T Consensus       243 ~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (306)
T PRK07792        243 VNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLRDYF  287 (306)
T ss_pred             CCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHHHHh
Confidence            222 22221                   14578888888888874

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=97.86  E-value=0.00018  Score=59.74  Aligned_cols=127  Identities=20%  Similarity=0.166  Sum_probs=76.4

Q ss_pred             chhHHHHHHHHHHHH----HhCC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++..+..++    ++.+ -.++|++||..++++.                     .....|+.+|...+.+++.
T Consensus       521 ~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~---------------------~~~~aY~aSKaA~~~l~r~  579 (676)
T TIGR02632       521 LDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG---------------------KNASAYSAAKAAEAHLARC  579 (676)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC---------------------CCCHHHHHHHHHHHHHHHH
Confidence            457887776665444    3433 3589999996555431                     1346799999999999998


Q ss_pred             HHHh---cCCcEEEecCCcee-CCCCCCCChhh---------HHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           77 EAVA---RGVDLVVVNPVLVL-GPLLQSTVNAS---------IIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~-G~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      ++.+   .|+++..++|+.++ |..........         ...+......     ......+++++|+++++..++..
T Consensus       580 lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----r~~l~r~v~peDVA~av~~L~s~  654 (676)
T TIGR02632       580 LAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAK-----RTLLKRHIFPADIAEAVFFLASS  654 (676)
T ss_pred             HHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHh-----cCCcCCCcCHHHHHHHHHHHhCC
Confidence            7765   37889999999887 33221110000         0000000000     12234578999999999988764


Q ss_pred             C--CCCC-cEEEec
Q 030406          144 P--SASG-RYLCAE  154 (178)
Q Consensus       144 ~--~~~~-~~~~~~  154 (178)
                      .  ...| .+++.+
T Consensus       655 ~~~~~TG~~i~vDG  668 (676)
T TIGR02632       655 KSEKTTGCIITVDG  668 (676)
T ss_pred             cccCCcCcEEEECC
Confidence            3  2334 445644

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.84  E-value=0.00052  Score=51.25  Aligned_cols=105  Identities=15%  Similarity=0.086  Sum_probs=70.3

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++.    +.+..++|++||. +.+...           .        ...+.|+.+|.+.+.+++.+
T Consensus       147 ~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~-~~~~~~-----------~--------p~~~~Y~asKaal~~l~~~l  206 (293)
T PRK05866        147 MVLNYYAPLRLIRGLAPGMLERGDGHIINVATW-GVLSEA-----------S--------PLFSVYNASKAALSAVSRVI  206 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCh-hhcCCC-----------C--------CCcchHHHHHHHHHHHHHHH
Confidence            4678888877777654    5566799999994 433110           0        12367999999999988876


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   .|+.+.+++||.+-.+-....             ..     ......+..+++|+.++.+++.+
T Consensus       207 a~e~~~~gI~v~~v~pg~v~T~~~~~~-------------~~-----~~~~~~~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        207 ETEWGDRGVHSTTLYYPLVATPMIAPT-------------KA-----YDGLPALTADEAAEWMVTAARTR  258 (293)
T ss_pred             HHHhcccCcEEEEEEcCcccCcccccc-------------cc-----ccCCCCCCHHHHHHHHHHHHhcC
Confidence            554   489999999997743321100             00     00122468999999999999864

>PRK08278 short chain dehydrogenase; Provisional

Probab=97.84  E-value=0.00056  Score=50.42  Aligned_cols=120  Identities=16%  Similarity=0.107  Sum_probs=76.1

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+-.++|++||....-            ..       ...+.+.|+.+|.+.|.+++.+
T Consensus       118 ~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~------------~~-------~~~~~~~Y~~sK~a~~~~~~~l  178 (273)
T PRK08278        118 QQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD------------PK-------WFAPHTAYTMAKYGMSLCTLGL  178 (273)
T ss_pred             HHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc------------cc-------ccCCcchhHHHHHHHHHHHHHH
Confidence            56899999999999864    2335788988832110            00       0124578999999999999987


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCCcEEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASGRYLC  152 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~  152 (178)
                      +.+.   ++.+..+.|+.++...       ...   ....+.     .....+...+|++++++.++....  ..|.+++
T Consensus       179 a~el~~~~I~v~~i~Pg~~i~t~-------~~~---~~~~~~-----~~~~~~~~p~~va~~~~~l~~~~~~~~~G~~~~  243 (273)
T PRK08278        179 AEEFRDDGIAVNALWPRTTIATA-------AVR---NLLGGD-----EAMRRSRTPEIMADAAYEILSRPAREFTGNFLI  243 (273)
T ss_pred             HHHhhhcCcEEEEEeCCCccccH-------HHH---hccccc-----ccccccCCHHHHHHHHHHHhcCccccceeEEEe
Confidence            7654   7888889998433211       000   111111     112246789999999999987643  3445555


Q ss_pred             ecC
Q 030406          153 AES  155 (178)
Q Consensus       153 ~~~  155 (178)
                      .++
T Consensus       244 ~~~  246 (273)
T PRK08278        244 DEE  246 (273)
T ss_pred             ccc
Confidence            443

>PRK05872 short chain dehydrogenase; Provisional

Probab=97.83  E-value=0.00046  Score=51.52  Aligned_cols=117  Identities=18%  Similarity=0.122  Sum_probs=74.6

Q ss_pred             chhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.++++++...   +..++|++||..+..+.                     .....|+.+|...+.+.+.++
T Consensus       113 ~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~~~~~l~  171 (296)
T PRK05872        113 IDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAA---------------------PGMAAYCASKAGVEAFANALR  171 (296)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCC---------------------CCchHHHHHHHHHHHHHHHHH
Confidence            578999999999888642   23589999995443211                     134579999999999988765


Q ss_pred             H---hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           79 V---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        79 ~---~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      .   ..|+.+.++.|+.+-.+-..... .....+.... +..+   .....++..+|+++++..++...
T Consensus       172 ~e~~~~gi~v~~v~Pg~v~T~~~~~~~-~~~~~~~~~~-~~~~---~p~~~~~~~~~va~~i~~~~~~~  235 (296)
T PRK05872        172 LEVAHHGVTVGSAYLSWIDTDLVRDAD-ADLPAFRELR-ARLP---WPLRRTTSVEKCAAAFVDGIERR  235 (296)
T ss_pred             HHHHHHCcEEEEEecCcccchhhhhcc-ccchhHHHHH-hhCC---CcccCCCCHHHHHHHHHHHHhcC
Confidence            3   35899999999988554211110 0001111111 1110   11234678999999999998764

>PRK07023 short chain dehydrogenase; Provisional

Probab=97.82  E-value=7.5e-05  Score=53.95  Aligned_cols=72  Identities=28%  Similarity=0.257  Sum_probs=52.6

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+++.+.    +.+.+++|++||. +.+.                    +..+...|+.+|...|.+++.+
T Consensus       106 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~-~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~~  164 (243)
T PRK07023        106 VGLNVAAPLMLTAALAQAASDAAERRILHISSG-AARN--------------------AYAGWSVYCATKAALDHHARAV  164 (243)
T ss_pred             eeeeehHHHHHHHHHHHHhhccCCCEEEEEeCh-hhcC--------------------CCCCchHHHHHHHHHHHHHHHH
Confidence            5678888666665554    3456799999995 3321                    1124567999999999999987


Q ss_pred             HHh--cCCcEEEecCCcee
Q 030406           78 AVA--RGVDLVVVNPVLVL   94 (178)
Q Consensus        78 ~~~--~~~~~~i~R~~~v~   94 (178)
                      +.+  .++++..++|+.+-
T Consensus       165 ~~~~~~~i~v~~v~pg~~~  183 (243)
T PRK07023        165 ALDANRALRIVSLAPGVVD  183 (243)
T ss_pred             HhcCCCCcEEEEecCCccc
Confidence            754  57899999999873

>PRK09072 short chain dehydrogenase; Provisional

Probab=97.80  E-value=0.00054  Score=50.11  Aligned_cols=108  Identities=16%  Similarity=0.034  Sum_probs=71.8

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++..    .+..++|++||..+.++.                     .....|+.+|...+.+++.+
T Consensus       108 ~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  166 (263)
T PRK09072        108 LALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY---------------------PGYASYCASKFALRGFSEAL  166 (263)
T ss_pred             HhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCC---------------------CCccHHHHHHHHHHHHHHHH
Confidence            56899999999988864    344689999885443321                     12356999999998888776


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   .++.+..+.|+.+-.+....        .....      .......+..++|+|++++.+++..
T Consensus       167 ~~~~~~~~i~v~~v~Pg~~~t~~~~~--------~~~~~------~~~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        167 RRELADTGVRVLYLAPRATRTAMNSE--------AVQAL------NRALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             HHHhcccCcEEEEEecCcccccchhh--------hcccc------cccccCCCCCHHHHHHHHHHHHhCC
Confidence            654   47888889998775432100        00000      0011124678899999999999876

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.80  E-value=0.00055  Score=49.72  Aligned_cols=126  Identities=13%  Similarity=0.103  Sum_probs=76.5

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+++++    .+.+..++|++||..++.+                     ......|+.+|...+.+.+.+
T Consensus       113 ~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~---------------------~~~~~~Y~~sKaa~~~~~~~l  171 (253)
T PRK06172        113 MGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGA---------------------APKMSIYAASKHAVIGLTKSA  171 (253)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccC---------------------CCCCchhHHHHHHHHHHHHHH
Confidence            467888887766554    3445578999999543321                     123467999999999998887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCcE-E
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGRY-L  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~-~  151 (178)
                      +.+.   |+++..+.||.+-.+..... ...............+     ...+...+|+++.++.++...  ...|.+ .
T Consensus       172 a~e~~~~~i~v~~i~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~  245 (253)
T PRK06172        172 AIEYAKKGIRVNAVCPAVIDTDMFRRA-YEADPRKAEFAAAMHP-----VGRIGKVEEVASAVLYLCSDGASFTTGHALM  245 (253)
T ss_pred             HHHhcccCeEEEEEEeCCccChhhhhh-cccChHHHHHHhccCC-----CCCccCHHHHHHHHHHHhCccccCcCCcEEE
Confidence            7654   68899999998854321110 0000111111111111     123567999999999988754  235544 4


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       246 ~dg  248 (253)
T PRK06172        246 VDG  248 (253)
T ss_pred             ECC
Confidence            443

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.79  E-value=7.8e-05  Score=50.77  Aligned_cols=72  Identities=19%  Similarity=0.174  Sum_probs=54.7

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++.-+....+.++|++.|||+|+.+||. ...                      .+..-.|...|-..|+-+.+.    
T Consensus       104 ykvDhDyvl~~A~~AKe~Gck~fvLvSS~-GAd----------------------~sSrFlY~k~KGEvE~~v~eL----  156 (238)
T KOG4039|consen  104 YKVDHDYVLQLAQAAKEKGCKTFVLVSSA-GAD----------------------PSSRFLYMKMKGEVERDVIEL----  156 (238)
T ss_pred             EeechHHHHHHHHHHHhCCCeEEEEEecc-CCC----------------------cccceeeeeccchhhhhhhhc----
Confidence            45556677888999999999999999994 321                      123456889999999988764    


Q ss_pred             CC-cEEEecCCceeCCCCCC
Q 030406           82 GV-DLVVVNPVLVLGPLLQS  100 (178)
Q Consensus        82 ~~-~~~i~R~~~v~G~~~~~  100 (178)
                      ++ .++|+|||.+.|.+...
T Consensus       157 ~F~~~~i~RPG~ll~~R~es  176 (238)
T KOG4039|consen  157 DFKHIIILRPGPLLGERTES  176 (238)
T ss_pred             cccEEEEecCcceecccccc
Confidence            44 47899999999976544

>PRK08643 acetoin reductase; Validated

Probab=97.77  E-value=0.0002  Score=52.08  Aligned_cols=126  Identities=15%  Similarity=0.091  Sum_probs=75.5

Q ss_pred             chhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++..+++++.+    .+ -.++|++||..+.++.                     ...+.|+.+|...+.+.+.
T Consensus       107 ~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~  165 (256)
T PRK08643        107 YNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN---------------------PELAVYSSTKFAVRGLTQT  165 (256)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC---------------------CCCchhHHHHHHHHHHHHH
Confidence            56899998877777653    22 3589999996444321                     1235699999999988887


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCCh-------hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVN-------ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--  144 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--  144 (178)
                      ++.+   .|+++..++|+.+..+.......       ..............     ....+...+|+++++..++...  
T Consensus       166 la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~va~~~~~L~~~~~~  240 (256)
T PRK08643        166 AARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDI-----TLGRLSEPEDVANCVSFLAGPDSD  240 (256)
T ss_pred             HHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccC-----CCCCCcCHHHHHHHHHHHhCcccc
Confidence            6653   57999999999887653211000       00000000011110     1123567899999999888654  


Q ss_pred             CCCCcE-EEe
Q 030406          145 SASGRY-LCA  153 (178)
Q Consensus       145 ~~~~~~-~~~  153 (178)
                      ...|.. .+.
T Consensus       241 ~~~G~~i~vd  250 (256)
T PRK08643        241 YITGQTIIVD  250 (256)
T ss_pred             CccCcEEEeC
Confidence            234544 443

>PLN02780 ketoreductase/ oxidoreductase

Probab=97.76  E-value=0.00078  Score=50.97  Aligned_cols=103  Identities=18%  Similarity=0.099  Sum_probs=70.6

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..++|++||.++.+...                   ......|+.||...+.+.+.+
T Consensus       162 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-------------------~p~~~~Y~aSKaal~~~~~~L  222 (320)
T PLN02780        162 IKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPS-------------------DPLYAVYAATKAYIDQFSRCL  222 (320)
T ss_pred             HHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC-------------------CccchHHHHHHHHHHHHHHHH
Confidence            5789999988888865    34567899999954432100                   012467999999999998877


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      +.+.   |+++..+.||.+-.+-..            . ..       ...-....+++|+.++..+..
T Consensus       223 ~~El~~~gI~V~~v~PG~v~T~~~~------------~-~~-------~~~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        223 YVEYKKSGIDVQCQVPLYVATKMAS------------I-RR-------SSFLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             HHHHhccCeEEEEEeeCceecCccc------------c-cC-------CCCCCCCHHHHHHHHHHHhCC
Confidence            6553   799999999988533110            0 00       111135789999999998864

>PRK07831 short chain dehydrogenase; Provisional

Probab=97.75  E-value=0.00095  Score=48.79  Aligned_cols=114  Identities=18%  Similarity=0.164  Sum_probs=74.0

Q ss_pred             chhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++..+++++..    .+ -.++|++||..+..+                     ..+...|+.+|.+.+.+.+.
T Consensus       125 ~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~---------------------~~~~~~Y~~sKaal~~~~~~  183 (262)
T PRK07831        125 LDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRA---------------------QHGQAHYAAAKAGVMALTRC  183 (262)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC---------------------CCCCcchHHHHHHHHHHHHH
Confidence            56899999888887753    23 457888888433211                     12345799999999999998


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      ++.+   +|+++..++|+.+..+......  . ...........     ...-+...+|++++++.++...
T Consensus       184 la~e~~~~gI~v~~i~Pg~~~t~~~~~~~--~-~~~~~~~~~~~-----~~~r~~~p~~va~~~~~l~s~~  246 (262)
T PRK07831        184 SALEAAEYGVRINAVAPSIAMHPFLAKVT--S-AELLDELAARE-----AFGRAAEPWEVANVIAFLASDY  246 (262)
T ss_pred             HHHHhCccCeEEEEEeeCCccCccccccc--C-HHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHcCch
Confidence            8765   5899999999998766422110  0 11111111111     1223567899999999988754

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.74  E-value=0.00095  Score=48.69  Aligned_cols=110  Identities=13%  Similarity=-0.026  Sum_probs=69.9

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+..++    ++.+-.+||++||..+..                     +..+...|+.+|...+.+.+.+
T Consensus       124 ~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------------------~~~~~~~Y~~sK~a~~~l~~~l  182 (256)
T PRK12859        124 YMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG---------------------PMVGELAYAATKGAIDALTSSL  182 (256)
T ss_pred             HHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC---------------------CCCCchHHHHHHHHHHHHHHHH
Confidence            567898887775444    333346899999953221                     1124468999999999998887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   .|+.+..++||.+-.+...    ..   ........   .  ....+...+|+++++..++...
T Consensus       183 a~~~~~~~i~v~~v~PG~i~t~~~~----~~---~~~~~~~~---~--~~~~~~~~~d~a~~~~~l~s~~  240 (256)
T PRK12859        183 AAEVAHLGITVNAINPGPTDTGWMT----EE---IKQGLLPM---F--PFGRIGEPKDAARLIKFLASEE  240 (256)
T ss_pred             HHHhhhhCeEEEEEEEccccCCCCC----HH---HHHHHHhc---C--CCCCCcCHHHHHHHHHHHhCcc
Confidence            654   5799999999988543211    11   11111111   1  1123456899999998887653

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=97.74  E-value=0.00085  Score=49.03  Aligned_cols=115  Identities=11%  Similarity=-0.033  Sum_probs=68.4

Q ss_pred             chhHHHHHHHHHHH----HHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVA----AAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.+...+.+.    +++.+..++|++||..+..+.                     .....|+.+|...+.+.+.+
T Consensus       121 ~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~l  179 (260)
T PRK08416        121 YTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYI---------------------ENYAGHGTSKAAVETMVKYA  179 (260)
T ss_pred             HhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCC---------------------CCcccchhhHHHHHHHHHHH
Confidence            45666665554444    444445689999995332110                     12346999999999999887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+.   |+.+..+.||.+-.+-.... ... ...........     ...-+..++|++++++.++...
T Consensus       180 a~el~~~gi~v~~v~PG~i~T~~~~~~-~~~-~~~~~~~~~~~-----~~~r~~~p~~va~~~~~l~~~~  242 (260)
T PRK08416        180 ATELGEKNIRVNAVSGGPIDTDALKAF-TNY-EEVKAKTEELS-----PLNRMGQPEDLAGACLFLCSEK  242 (260)
T ss_pred             HHHhhhhCeEEEEEeeCcccChhhhhc-cCC-HHHHHHHHhcC-----CCCCCCCHHHHHHHHHHHcChh
Confidence            7764   79999999998743311100 000 00111111111     1123677999999999988654

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=97.73  E-value=0.001  Score=48.59  Aligned_cols=115  Identities=10%  Similarity=0.010  Sum_probs=69.5

Q ss_pred             chhHHHHHHHHHH----HHHhCC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIV----AAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~----~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++..++.    .+.+.+ -.++|++||.....                     +..+...|+.+|.+.+.+.+.
T Consensus       113 ~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~---------------------~~~~~~~Y~~sKaa~~~~~~~  171 (261)
T PRK08936        113 INTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI---------------------PWPLFVHYAASKGGVKLMTET  171 (261)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC---------------------CCCCCcccHHHHHHHHHHHHH
Confidence            4678777765544    445544 36899999943221                     112446799999888877766


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      ++.+   .|+.+..++|+.+-.+........  ...........     ....+...+|+++.+..++..+
T Consensus       172 la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~va~~~~~l~s~~  235 (261)
T PRK08936        172 LAMEYAPKGIRVNNIGPGAINTPINAEKFAD--PKQRADVESMI-----PMGYIGKPEEIAAVAAWLASSE  235 (261)
T ss_pred             HHHHHhhcCeEEEEEEECcCCCCccccccCC--HHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHcCcc
Confidence            5443   489999999999976642211111  11111111111     1223667899999999988753

>PRK07201 short chain dehydrogenase; Provisional

Probab=97.71  E-value=0.00063  Score=56.29  Aligned_cols=104  Identities=19%  Similarity=0.204  Sum_probs=71.2

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++..++    ++.+..++|++||. +.+...                    .....|+.+|...+.+.+.+
T Consensus       478 ~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~-~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l  536 (657)
T PRK07201        478 MAVNYFGAVRLILGLLPHMRERRFGHVVNVSSI-GVQTNA--------------------PRFSAYVASKAALDAFSDVA  536 (657)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhcCCCEEEEECCh-hhcCCC--------------------CCcchHHHHHHHHHHHHHHH
Confidence            568999988876665    34566799999995 433210                    12356999999999998876


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   .|+.+..++||.+..+-..+.             ..   .  .....+..+++|+.++..+...
T Consensus       537 a~e~~~~~i~v~~v~pg~v~T~~~~~~-------------~~---~--~~~~~~~~~~~a~~i~~~~~~~  588 (657)
T PRK07201        537 ASETLSDGITFTTIHMPLVRTPMIAPT-------------KR---Y--NNVPTISPEEAADMVVRAIVEK  588 (657)
T ss_pred             HHHHHhhCCcEEEEECCcCcccccCcc-------------cc---c--cCCCCCCHHHHHHHHHHHHHhC
Confidence            654   489999999999865432110             00   0  1123567899999998877553

>PRK05854 short chain dehydrogenase; Provisional

Probab=97.69  E-value=0.00027  Score=53.24  Aligned_cols=85  Identities=18%  Similarity=0.042  Sum_probs=57.2

Q ss_pred             chhHHHHHHHHHHHHHh---CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE---AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++..+.+.+..   .+..++|++||.+..++......   +.++.      ...+...|+.||.+.+.+.++++
T Consensus       120 ~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~---~~~~~------~~~~~~~Y~~SK~a~~~~~~~la  190 (313)
T PRK05854        120 FGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDD---LNWER------SYAGMRAYSQSKIAVGLFALELD  190 (313)
T ss_pred             hhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCccc---ccccc------cCcchhhhHHHHHHHHHHHHHHH
Confidence            57899997777766652   23458999999655443211111   22221      12355789999999999998886


Q ss_pred             Hh-----cCCcEEEecCCceeC
Q 030406           79 VA-----RGVDLVVVNPVLVLG   95 (178)
Q Consensus        79 ~~-----~~~~~~i~R~~~v~G   95 (178)
                      ++     .|+.+..+.||.+-.
T Consensus       191 ~~~~~~~~gI~v~~v~PG~v~T  212 (313)
T PRK05854        191 RRSRAAGWGITSNLAHPGVAPT  212 (313)
T ss_pred             HHhhcCCCCeEEEEEecceecc
Confidence            53     368899999998854

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=97.67  E-value=0.001  Score=48.86  Aligned_cols=112  Identities=15%  Similarity=0.021  Sum_probs=71.1

Q ss_pred             chhHHHHHHHHHHHHHhCC----------CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAK----------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE   71 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~----------~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E   71 (178)
                      +++|+.++..+++++....          ..++|++||.....                     +..+...|+.+|...+
T Consensus       123 ~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~~~---------------------~~~~~~~Y~asK~a~~  181 (267)
T TIGR02685       123 FGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQ---------------------PLLGFTMYTMAKHALE  181 (267)
T ss_pred             HHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhhccC---------------------CCcccchhHHHHHHHH
Confidence            5789999999888765321          23577777732210                     1124467999999999


Q ss_pred             HHHHHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           72 KAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        72 ~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      .+.+.++.+   .|+++..++||.+..+....   ..   .........+ .   ...+...+|++++++.++..+
T Consensus       182 ~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~---~~---~~~~~~~~~~-~---~~~~~~~~~va~~~~~l~~~~  247 (267)
T TIGR02685       182 GLTRSAALELAPLQIRVNGVAPGLSLLPDAMP---FE---VQEDYRRKVP-L---GQREASAEQIADVVIFLVSPK  247 (267)
T ss_pred             HHHHHHHHHHhhhCeEEEEEecCCccCccccc---hh---HHHHHHHhCC-C---CcCCCCHHHHHHHHHHHhCcc
Confidence            999987665   58999999999886543211   11   1111111111 1   123467899999999988754

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=97.66  E-value=0.0019  Score=48.73  Aligned_cols=143  Identities=13%  Similarity=0.053  Sum_probs=75.7

Q ss_pred             chhHHHHHHHHHHHHH----hCC--CCEEEEeccccccccCCCC-CCCCccCCCC-------CC-----chhhhcccCch
Q 030406            2 VEPAVIGTKNVIVAAA----EAK--VRRVVFTSSIGAVYMDPNR-SPDDVVDESC-------WS-----DLEFCKNTKNW   62 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~--~~~~i~~Ss~~~~~~~~~~-~~~~~~~E~~-------~~-----~~~~~~~~~~~   62 (178)
                      +++|+.++..++.++.    +.+  ..+||++||..+....... .+. +.+..+       +.     ....+..+...
T Consensus       110 ~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (314)
T TIGR01289       110 VGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPP-KANLGDLSGLAAGFKAPIAMIDGKEFKGAKA  188 (314)
T ss_pred             HhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCC-cccccccccccccCCCcccccCCCCcchhhh
Confidence            5789988877766554    332  3699999995443211000 000 000000       00     00011234567


Q ss_pred             HHHHHHHHHHHHHHHHHh----cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHH
Q 030406           63 YCYGKAVAEKAAWEEAVA----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHI  138 (178)
Q Consensus        63 Y~~sK~~~E~~~~~~~~~----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  138 (178)
                      |+.||.+...+.++++++    .|+.++.++||.|...............+.......      ....+..+++.++.++
T Consensus       189 Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~a~~l~  262 (314)
T TIGR01289       189 YKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFPPFQKY------ITKGYVSEEEAGERLA  262 (314)
T ss_pred             HHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHHHHHHH------HhccccchhhhhhhhH
Confidence            999999988887777654    368899999999864432221111111111111000      0112467888998888


Q ss_pred             HhhcCCC--CCCcEE
Q 030406          139 LVYETPS--ASGRYL  151 (178)
Q Consensus       139 ~~~~~~~--~~~~~~  151 (178)
                      .++..+.  .+|.|+
T Consensus       263 ~~~~~~~~~~~g~~~  277 (314)
T TIGR01289       263 QVVSDPKLKKSGVYW  277 (314)
T ss_pred             HhhcCcccCCCceee
Confidence            8776543  345664

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.64  E-value=0.0017  Score=51.34  Aligned_cols=112  Identities=19%  Similarity=0.097  Sum_probs=70.3

Q ss_pred             chhHHHHHHHHHHHHHhCC----CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAK----VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~----~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++....    -.+||++||.+++++.                     .....|+.+|...+.+++.+
T Consensus       312 ~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~---------------------~~~~~Y~asKaal~~~~~~l  370 (450)
T PRK08261        312 LAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN---------------------RGQTNYAASKAGVIGLVQAL  370 (450)
T ss_pred             HHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC---------------------CCChHHHHHHHHHHHHHHHH
Confidence            5689999999999997632    2689999996554331                     13467999999888877765


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      +.+   .|+.+..+.||.+-.+- .......   ..... ...    .......-.+|+++++..++..
T Consensus       371 a~el~~~gi~v~~v~PG~i~t~~-~~~~~~~---~~~~~-~~~----~~l~~~~~p~dva~~~~~l~s~  430 (450)
T PRK08261        371 APLLAERGITINAVAPGFIETQM-TAAIPFA---TREAG-RRM----NSLQQGGLPVDVAETIAWLASP  430 (450)
T ss_pred             HHHHhhhCcEEEEEEeCcCcchh-hhccchh---HHHHH-hhc----CCcCCCCCHHHHHHHHHHHhCh
Confidence            443   47899999999873211 1110000   01111 110    1111223467999999988864

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=97.61  E-value=0.0004  Score=50.87  Aligned_cols=72  Identities=18%  Similarity=0.069  Sum_probs=54.7

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+++++..    .+..++|++||..+..+.                     .....|+.+|...+.+++.+
T Consensus       114 ~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~l~~~l  172 (266)
T PRK06171        114 FNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGS---------------------EGQSCYAATKAALNSFTRSW  172 (266)
T ss_pred             HhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCC---------------------CCCchhHHHHHHHHHHHHHH
Confidence            56899999999988874    334689999995443211                     23467999999999998887


Q ss_pred             HHh---cCCcEEEecCCcee
Q 030406           78 AVA---RGVDLVVVNPVLVL   94 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~   94 (178)
                      +.+   .|+++..++||.+-
T Consensus       173 a~e~~~~gi~v~~v~pG~~~  192 (266)
T PRK06171        173 AKELGKHNIRVVGVAPGILE  192 (266)
T ss_pred             HHHhhhcCeEEEEEeccccc
Confidence            654   47999999999874

>PLN00015 protochlorophyllide reductase

Probab=97.60  E-value=0.0016  Score=48.92  Aligned_cols=143  Identities=15%  Similarity=0.069  Sum_probs=74.2

Q ss_pred             chhHHHHHHHHHHHHH----hCC--CCEEEEeccccccccCC--CCCCCC----------ccCCCC---CCchhhhcccC
Q 030406            2 VEPAVIGTKNVIVAAA----EAK--VRRVVFTSSIGAVYMDP--NRSPDD----------VVDESC---WSDLEFCKNTK   60 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~--~~~~i~~Ss~~~~~~~~--~~~~~~----------~~~E~~---~~~~~~~~~~~   60 (178)
                      +++|+.|+..+++++.    +.+  ..++|++||..+..+..  ...+..          ...+..   +... ....+.
T Consensus       104 ~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  182 (308)
T PLN00015        104 VGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDG-GEFDGA  182 (308)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhhhhcccCCccchhhccc-cCCcHH
Confidence            5789999777765544    333  46899999954422100  000000          000000   0000 011244


Q ss_pred             chHHHHHHHHHHHHHHHHHh----cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHH
Q 030406           61 NWYCYGKAVAEKAAWEEAVA----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALA  136 (178)
Q Consensus        61 ~~Y~~sK~~~E~~~~~~~~~----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  136 (178)
                      ..|+.||.+.+...++++++    .|+.+..+.||.|...................... .+     ...+..+++.|+.
T Consensus       183 ~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~pe~~a~~  256 (308)
T PLN00015        183 KAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQK-YI-----TKGYVSEEEAGKR  256 (308)
T ss_pred             HHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHHHH-HH-----hcccccHHHhhhh
Confidence            67999999977776666654    37899999999996443222111111111100000 00     0124678999999


Q ss_pred             HHHhhcCCC--CCCcEE
Q 030406          137 HILVYETPS--ASGRYL  151 (178)
Q Consensus       137 ~~~~~~~~~--~~~~~~  151 (178)
                      ++.++....  ..|.|+
T Consensus       257 ~~~l~~~~~~~~~G~~~  273 (308)
T PLN00015        257 LAQVVSDPSLTKSGVYW  273 (308)
T ss_pred             hhhhccccccCCCcccc
Confidence            988776532  345564

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.60  E-value=0.0017  Score=47.30  Aligned_cols=114  Identities=10%  Similarity=-0.003  Sum_probs=71.6

Q ss_pred             chhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++..+++++..    .+ -.++|++||..+..+.                     .....|+.+|...+.+.+.
T Consensus       111 ~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~---------------------~~~~~Y~asK~a~~~l~~~  169 (251)
T PRK12481        111 ININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG---------------------IRVPSYTASKSAVMGLTRA  169 (251)
T ss_pred             heeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC---------------------CCCcchHHHHHHHHHHHHH
Confidence            57899998888877653    23 3589999995443211                     1224699999999999887


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      ++.+   .|+++..++||.+-.+.... .... ...........   +  ...+...+|+++++..++..
T Consensus       170 la~e~~~~girvn~v~PG~v~t~~~~~-~~~~-~~~~~~~~~~~---p--~~~~~~peeva~~~~~L~s~  232 (251)
T PRK12481        170 LATELSQYNINVNAIAPGYMATDNTAA-LRAD-TARNEAILERI---P--ASRWGTPDDLAGPAIFLSSS  232 (251)
T ss_pred             HHHHHhhcCeEEEEEecCCCccCchhh-cccC-hHHHHHHHhcC---C--CCCCcCHHHHHHHHHHHhCc
Confidence            6653   58999999999885432110 0000 00111111111   1  12356799999999998864

>PRK06483 dihydromonapterin reductase; Provisional

Probab=97.55  E-value=0.0047  Score=44.34  Aligned_cols=115  Identities=12%  Similarity=0.024  Sum_probs=71.2

Q ss_pred             chhHHHHHHHHHHHHHh----CC--CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW   75 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~--~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~   75 (178)
                      +++|+.++..+.+++..    .+  ..++|++||..+..+                     ......|+.+|...+.+++
T Consensus       102 ~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~---------------------~~~~~~Y~asKaal~~l~~  160 (236)
T PRK06483        102 MQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKG---------------------SDKHIAYAASKAALDNMTL  160 (236)
T ss_pred             HHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccC---------------------CCCCccHHHHHHHHHHHHH
Confidence            56788888776666553    23  358999998432111                     0133579999999999999


Q ss_pred             HHHHhc--CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC
Q 030406           76 EEAVAR--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG  148 (178)
Q Consensus        76 ~~~~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~  148 (178)
                      .++.+.  ++.+..++||.+.-+....   ...  ..... ...+ .+    -+...+|+++++..++......|
T Consensus       161 ~~a~e~~~~irvn~v~Pg~~~~~~~~~---~~~--~~~~~-~~~~-~~----~~~~~~~va~~~~~l~~~~~~~G  224 (236)
T PRK06483        161 SFAAKLAPEVKVNSIAPALILFNEGDD---AAY--RQKAL-AKSL-LK----IEPGEEEIIDLVDYLLTSCYVTG  224 (236)
T ss_pred             HHHHHHCCCcEEEEEccCceecCCCCC---HHH--HHHHh-ccCc-cc----cCCCHHHHHHHHHHHhcCCCcCC
Confidence            988775  4788889999884321110   111  11111 1111 11    13468999999999987554455

>PRK07063 short chain dehydrogenase; Provisional

Probab=97.54  E-value=0.00048  Score=50.26  Aligned_cols=117  Identities=12%  Similarity=-0.027  Sum_probs=72.4

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..++|++||..+..+                     ......|+.+|.+.+.+.+.+
T Consensus       114 ~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~~sKaa~~~~~~~l  172 (260)
T PRK07063        114 FAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKI---------------------IPGCFPYPVAKHGLLGLTRAL  172 (260)
T ss_pred             HHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccC---------------------CCCchHHHHHHHHHHHHHHHH
Confidence            57899999888888753    34568999999533211                     013356999999999999887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCCh--hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+.   |+++..++||.+-.+-......  .............. .    ..-+...+|++++++.++..+
T Consensus       173 a~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~----~~r~~~~~~va~~~~fl~s~~  239 (260)
T PRK07063        173 GIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQ-P----MKRIGRPEEVAMTAVFLASDE  239 (260)
T ss_pred             HHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcC-C----CCCCCCHHHHHHHHHHHcCcc
Confidence            6554   7899999999885432110000  00000011111111 1    112456899999999988654

>PRK05867 short chain dehydrogenase; Provisional

Probab=97.54  E-value=0.0013  Score=47.72  Aligned_cols=114  Identities=16%  Similarity=0.133  Sum_probs=72.3

Q ss_pred             chhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++..+++++..    .+ -.++|++||..+....                   .......|+.+|...+.+.+.
T Consensus       114 ~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------------------~~~~~~~Y~asKaal~~~~~~  174 (253)
T PRK05867        114 QNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN-------------------VPQQVSHYCASKAAVIHLTKA  174 (253)
T ss_pred             HHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC-------------------CCCCccchHHHHHHHHHHHHH
Confidence            56899999988888753    22 2479999885332110                   001235799999999999998


Q ss_pred             HHHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           77 EAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        77 ~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      ++.+.   |+++..++||.+-.+.....     ...........+     ...+...+|++++++.++...
T Consensus       175 la~e~~~~gI~vn~i~PG~v~t~~~~~~-----~~~~~~~~~~~~-----~~r~~~p~~va~~~~~L~s~~  235 (253)
T PRK05867        175 MAVELAPHKIRVNSVSPGYILTELVEPY-----TEYQPLWEPKIP-----LGRLGRPEELAGLYLYLASEA  235 (253)
T ss_pred             HHHHHhHhCeEEEEeecCCCCCcccccc-----hHHHHHHHhcCC-----CCCCcCHHHHHHHHHHHcCcc
Confidence            76553   79999999999855432111     011111111111     123567999999999988653

>PRK06940 short chain dehydrogenase; Provisional

Probab=97.51  E-value=0.0023  Score=47.31  Aligned_cols=137  Identities=15%  Similarity=0.122  Sum_probs=73.4

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCC-CCCc---cCCCCCCchhh--h---cccCchHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRS-PDDV---VDESCWSDLEF--C---KNTKNWYCYGKAVA   70 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~-~~~~---~~E~~~~~~~~--~---~~~~~~Y~~sK~~~   70 (178)
                      +++|+.++.++++++...  .-.++|++||.++........ ....   ++..+......  +   ..+...|+.+|...
T Consensus        97 ~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~  176 (275)
T PRK06940         97 LKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRAN  176 (275)
T ss_pred             HHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccccccccccccCCccchhHHHHHHH
Confidence            678999999999988753  113467777744443210000 0000   11110000000  0   01346799999999


Q ss_pred             HHHHHHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           71 EKAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        71 E~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      +.+.+.++.+   .|+.+..+.||.+-.+-....................+     ..-+...+|+|+++..++..
T Consensus       177 ~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p-----~~r~~~peeia~~~~fL~s~  247 (275)
T PRK06940        177 ALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSP-----AGRPGTPDEIAALAEFLMGP  247 (275)
T ss_pred             HHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCC-----cccCCCHHHHHHHHHHHcCc
Confidence            9988876554   47889999999886542111000000001111111111     12367899999999988854

>PRK05599 hypothetical protein; Provisional

Probab=97.41  E-value=0.012  Score=42.76  Aligned_cols=111  Identities=19%  Similarity=0.149  Sum_probs=69.2

Q ss_pred             hhHHHHHHHHHHH----HHhCC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            3 EPAVIGTKNVIVA----AAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         3 ~~nv~~t~~ll~~----~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      ++|+.+..+++.+    +.+.+ -.++|++||..+..+                     ......|+.+|...+.+.+.+
T Consensus       106 ~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~~~~~l  164 (246)
T PRK05599        106 TVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRA---------------------RRANYVYGSTKAGLDAFCQGL  164 (246)
T ss_pred             HHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccC---------------------CcCCcchhhHHHHHHHHHHHH
Confidence            4566666655444    33332 358999999543221                     012356999999999988877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEEec
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAE  154 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~  154 (178)
                      +.+   .|+.+..+.||.+..+-..               +..+    .. -....+|+|++++.++........+...+
T Consensus       165 a~el~~~~I~v~~v~PG~v~T~~~~---------------~~~~----~~-~~~~pe~~a~~~~~~~~~~~~~~~~~~~~  224 (246)
T PRK05599        165 ADSLHGSHVRLIIARPGFVIGSMTT---------------GMKP----AP-MSVYPRDVAAAVVSAITSSKRSTTLWIPG  224 (246)
T ss_pred             HHHhcCCCceEEEecCCcccchhhc---------------CCCC----CC-CCCCHHHHHHHHHHHHhcCCCCceEEeCc
Confidence            665   4688888999988543110               1000    00 02568999999999998865444444443

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=97.39  E-value=0.0066  Score=43.52  Aligned_cols=120  Identities=9%  Similarity=0.025  Sum_probs=74.4

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+..++..    .+..+++++||..+..           .+.       +..+...|+.+|...+.+.+.+
T Consensus       101 ~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~-----------~~~-------~~~~~~~Y~asK~a~~~~~~~l  162 (235)
T PRK09009        101 ITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSI-----------SDN-------RLGGWYSYRASKAALNMFLKTL  162 (235)
T ss_pred             HHHHhHHHHHHHHHHHhhccccCCceEEEEeeccccc-----------ccC-------CCCCcchhhhhHHHHHHHHHHH
Confidence            45778887777766654    3456899988732211           111       0123457999999999999887


Q ss_pred             HHh-----cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCCcE
Q 030406           78 AVA-----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASGRY  150 (178)
Q Consensus        78 ~~~-----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~  150 (178)
                      +.+     .++.+..+.||.+-.+....           ....      .....++..+|+++.+..++....  ..|.+
T Consensus       163 a~e~~~~~~~i~v~~v~PG~v~t~~~~~-----------~~~~------~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~  225 (235)
T PRK09009        163 SIEWQRSLKHGVVLALHPGTTDTALSKP-----------FQQN------VPKGKLFTPEYVAQCLLGIIANATPAQSGSF  225 (235)
T ss_pred             HHHhhcccCCeEEEEEcccceecCCCcc-----------hhhc------cccCCCCCHHHHHHHHHHHHHcCChhhCCcE
Confidence            754     36778889999885543111           0000      012235789999999999997753  34444


Q ss_pred             E-EecCc
Q 030406          151 L-CAESV  156 (178)
Q Consensus       151 ~-~~~~~  156 (178)
                      + +.++.
T Consensus       226 ~~~~g~~  232 (235)
T PRK09009        226 LAYDGET  232 (235)
T ss_pred             EeeCCcC
Confidence            3 44443

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=97.38  E-value=0.00094  Score=48.59  Aligned_cols=115  Identities=10%  Similarity=-0.021  Sum_probs=72.3

Q ss_pred             chhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++..    .+ -.++|++||..+..+.                     .....|+.+|.+.+.+.+.
T Consensus       113 ~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~~sKaa~~~~~~~  171 (253)
T PRK08993        113 MNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG---------------------IRVPSYTASKSGVMGVTRL  171 (253)
T ss_pred             HhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC---------------------CCCcchHHHHHHHHHHHHH
Confidence            57899999988888754    22 2579999995332211                     1224699999999999887


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      ++.+   .|+.+..++||.+-.+-.... ... ....+......   +  ..-+...+|+++.+..++...
T Consensus       172 la~e~~~~gi~v~~v~pG~v~T~~~~~~-~~~-~~~~~~~~~~~---p--~~r~~~p~eva~~~~~l~s~~  235 (253)
T PRK08993        172 MANEWAKHNINVNAIAPGYMATNNTQQL-RAD-EQRSAEILDRI---P--AGRWGLPSDLMGPVVFLASSA  235 (253)
T ss_pred             HHHHhhhhCeEEEEEeeCcccCcchhhh-ccc-hHHHHHHHhcC---C--CCCCcCHHHHHHHHHHHhCcc
Confidence            7665   578999999999954421110 000 00111111111   1  122667899999999988754

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=97.33  E-value=0.00091  Score=48.92  Aligned_cols=116  Identities=19%  Similarity=0.111  Sum_probs=71.9

Q ss_pred             chhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++..+++++...   +-.++|++||..+.++.                     .....|+.+|...+.+.+.++
T Consensus       112 ~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~---------------------~~~~~Y~~sKaa~~~l~~~la  170 (262)
T TIGR03325       112 FHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPN---------------------GGGPLYTAAKHAVVGLVKELA  170 (262)
T ss_pred             heeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCC---------------------CCCchhHHHHHHHHHHHHHHH
Confidence            678999999999988752   22468888885443311                     133569999999999999887


Q ss_pred             HhcC--CcEEEecCCceeCCCCCCC-C--hh-hH--HHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           79 VARG--VDLVVVNPVLVLGPLLQST-V--NA-SI--IHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        79 ~~~~--~~~~i~R~~~v~G~~~~~~-~--~~-~~--~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      .+.+  +.+..+.||.+..+-.... .  .. ..  .......+...+     ..-+...+|++++++.++..
T Consensus       171 ~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-----~~r~~~p~eva~~~~~l~s~  238 (262)
T TIGR03325       171 FELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLP-----IGRMPDAEEYTGAYVFFATR  238 (262)
T ss_pred             HhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCC-----CCCCCChHHhhhheeeeecC
Confidence            7753  6777889998865421110 0  00 00  001111111111     12356789999999888765

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=97.32  E-value=0.0014  Score=47.83  Aligned_cols=116  Identities=17%  Similarity=0.076  Sum_probs=69.4

Q ss_pred             chhHHHHHHHHHHHHHh----C-C-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----A-K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW   75 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~-~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~   75 (178)
                      +++|+.++..+.+++..    . + -.++|++||.++..+                     ......|+.+|...+.+.+
T Consensus       118 ~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~---------------------~~~~~~Y~asKaal~~l~~  176 (256)
T TIGR01500       118 WALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP---------------------FKGWALYCAGKAARDMLFQ  176 (256)
T ss_pred             HHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC---------------------CCCchHHHHHHHHHHHHHH
Confidence            57899998777766643    2 2 258999999644321                     1133579999999999998


Q ss_pred             HHHHh---cCCcEEEecCCceeCCCCCCCChh-hHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           76 EEAVA---RGVDLVVVNPVLVLGPLLQSTVNA-SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        76 ~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      .++.+   .|+.+..+.||.+-.+-....... .-...........     ...-+..++|+|+.++.+++.
T Consensus       177 ~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~p~eva~~~~~l~~~  243 (256)
T TIGR01500       177 VLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELK-----AKGKLVDPKVSAQKLLSLLEK  243 (256)
T ss_pred             HHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHH-----hcCCCCCHHHHHHHHHHHHhc
Confidence            87655   478888899998843210000000 0000000000000     111267899999999999853

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06484 short chain dehydrogenase; Validated

Probab=97.30  E-value=0.0047  Score=49.75  Aligned_cols=115  Identities=14%  Similarity=0.048  Sum_probs=71.2

Q ss_pred             chhHHHHHHHHHHHHHhC----CC-CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----KV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++..+++++...    +- .++|++||..+..+.                     .....|+.+|...+.+.+.
T Consensus       109 ~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~l~~~  167 (520)
T PRK06484        109 QAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL---------------------PKRTAYSASKAAVISLTRS  167 (520)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC---------------------CCCchHHHHHHHHHHHHHH
Confidence            578999999888887642    33 389999995443321                     1235799999999999887


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      ++.+   .++++..++|+.+-.+......... ...........   +  ...+...+|+++++..++..
T Consensus       168 la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~---~--~~~~~~~~~va~~v~~l~~~  231 (520)
T PRK06484        168 LACEWAAKGIRVNAVLPGYVRTQMVAELERAG-KLDPSAVRSRI---P--LGRLGRPEEIAEAVFFLASD  231 (520)
T ss_pred             HHHHhhhhCeEEEEEccCCcCchhhhhhcccc-hhhhHHHHhcC---C--CCCCcCHHHHHHHHHHHhCc
Confidence            6655   4799999999988543211100000 00001011110   1  11246789999999888764

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.30  E-value=0.0075  Score=43.90  Aligned_cols=115  Identities=13%  Similarity=0.032  Sum_probs=72.6

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++..+++++...  +-.++|++||.++..+                     ......|+.+|...+.+.+.++.
T Consensus       115 ~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~---------------------~~~~~~Y~asKaal~~l~~~la~  173 (252)
T PRK06079        115 QDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERA---------------------IPNYNVMGIAKAALESSVRYLAR  173 (252)
T ss_pred             hCcccHHHHHHHHHHHHhcccCceEEEEeccCcccc---------------------CCcchhhHHHHHHHHHHHHHHHH
Confidence            578899988888877652  2357999998533211                     01235799999999999887766


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +   .|+.+..+.||.+-.+-.... .. ............+     ..-+...+|+++++..++...
T Consensus       174 el~~~gI~vn~i~PG~v~T~~~~~~-~~-~~~~~~~~~~~~p-----~~r~~~pedva~~~~~l~s~~  234 (252)
T PRK06079        174 DLGKKGIRVNAISAGAVKTLAVTGI-KG-HKDLLKESDSRTV-----DGVGVTIEEVGNTAAFLLSDL  234 (252)
T ss_pred             HhhhcCcEEEEEecCcccccccccC-CC-hHHHHHHHHhcCc-----ccCCCCHHHHHHHHHHHhCcc
Confidence            4   479999999998854321110 00 0111111111111     123677899999999988653

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.29  E-value=0.009  Score=44.08  Aligned_cols=115  Identities=12%  Similarity=0.068  Sum_probs=71.8

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...  +-.++|++||.++..+                     ......|+.+|...+.+.+.++.
T Consensus       117 ~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~---------------------~~~~~~Y~asKaAl~~l~r~la~  175 (271)
T PRK06505        117 MVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRV---------------------MPNYNVMGVAKAALEASVRYLAA  175 (271)
T ss_pred             HhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcccc---------------------CCccchhhhhHHHHHHHHHHHHH
Confidence            578999988888777542  1257999998543221                     01235699999999999887766


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +   .|+.+..+.||.+-.+-.... .. ............+     ..-+...+|++++++.++...
T Consensus       176 el~~~gIrVn~v~PG~i~T~~~~~~-~~-~~~~~~~~~~~~p-----~~r~~~peeva~~~~fL~s~~  236 (271)
T PRK06505        176 DYGPQGIRVNAISAGPVRTLAGAGI-GD-ARAIFSYQQRNSP-----LRRTVTIDEVGGSALYLLSDL  236 (271)
T ss_pred             HHhhcCeEEEEEecCCccccccccC-cc-hHHHHHHHhhcCC-----ccccCCHHHHHHHHHHHhCcc
Confidence            5   478899999998855421110 00 0111111111111     112457899999999988653

>PRK05855 short chain dehydrogenase; Validated

Probab=97.21  E-value=0.0019  Score=52.42  Aligned_cols=120  Identities=15%  Similarity=0.068  Sum_probs=70.9

Q ss_pred             chhHHHHHHHHHHHHH----hCC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.|+.++++++.    +.+ -.+||++||. +.+..                    ......|+.+|.+.+.+.+.
T Consensus       420 ~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~-~~~~~--------------------~~~~~~Y~~sKaa~~~~~~~  478 (582)
T PRK05855        420 LDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASA-AAYAP--------------------SRSLPAYATSKAAVLMLSEC  478 (582)
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECCh-hhccC--------------------CCCCcHHHHHHHHHHHHHHH
Confidence            5689999999888764    333 2589999995 43321                    12346799999999988776


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCC-hh-hHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTV-NA-SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                      ++.+   .|+.++.++||.+-.+-..... .. ................   ..-.+..+|+|++++.++..+.
T Consensus       479 l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~~va~~~~~~~~~~~  549 (582)
T PRK05855        479 LRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLY---QRRGYGPEKVAKAIVDAVKRNK  549 (582)
T ss_pred             HHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhc---cccCCCHHHHHHHHHHHHHcCC
Confidence            6543   4899999999988432111100 00 0000000000000000   0112468999999999998753

>PRK07791 short chain dehydrogenase; Provisional

Probab=97.17  E-value=0.0039  Score=46.36  Aligned_cols=120  Identities=13%  Similarity=0.108  Sum_probs=73.3

Q ss_pred             chhHHHHHHHHHHHHHh----CC------CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE   71 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~------~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E   71 (178)
                      +++|+.++..+++++..    .+      -.+||++||.++..+.                     .....|+.+|...+
T Consensus       120 ~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~  178 (286)
T PRK07791        120 IAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGS---------------------VGQGNYSAAKAGIA  178 (286)
T ss_pred             HHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCC---------------------CCchhhHHHHHHHH
Confidence            57899998888877642    11      1489999996554321                     12356999999999


Q ss_pred             HHHHHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CC
Q 030406           72 KAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SA  146 (178)
Q Consensus        72 ~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~  146 (178)
                      .+.+.++.+   .|+.+..+.|+ + ......   ..   ...... ..   +.....+...+|++++++.++...  ..
T Consensus       179 ~l~~~la~el~~~gIrVn~v~Pg-~-~T~~~~---~~---~~~~~~-~~---~~~~~~~~~pedva~~~~~L~s~~~~~i  246 (286)
T PRK07791        179 ALTLVAAAELGRYGVTVNAIAPA-A-RTRMTE---TV---FAEMMA-KP---EEGEFDAMAPENVSPLVVWLGSAESRDV  246 (286)
T ss_pred             HHHHHHHHHHHHhCeEEEEECCC-C-CCCcch---hh---HHHHHh-cC---cccccCCCCHHHHHHHHHHHhCchhcCC
Confidence            998876654   57999999997 4 111100   11   111111 11   111223567999999999988653  23


Q ss_pred             CCcE-EEec
Q 030406          147 SGRY-LCAE  154 (178)
Q Consensus       147 ~~~~-~~~~  154 (178)
                      .|.+ .+.+
T Consensus       247 tG~~i~vdg  255 (286)
T PRK07791        247 TGKVFEVEG  255 (286)
T ss_pred             CCcEEEEcC
Confidence            5544 4443

>PRK08177 short chain dehydrogenase; Provisional

Probab=97.14  E-value=0.0024  Score=45.54  Aligned_cols=77  Identities=12%  Similarity=-0.009  Sum_probs=52.9

Q ss_pred             chhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.++++++...   +..+++++||..+.   ....               +......|+.+|...+.+++.++
T Consensus       101 ~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~---~~~~---------------~~~~~~~Y~~sK~a~~~~~~~l~  162 (225)
T PRK08177        101 FLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGS---VELP---------------DGGEMPLYKASKAALNSMTRSFV  162 (225)
T ss_pred             eeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccc---cccC---------------CCCCccchHHHHHHHHHHHHHHH
Confidence            567888998888887642   33578888873221   1100               11233469999999999999876


Q ss_pred             Hh---cCCcEEEecCCceeCC
Q 030406           79 VA---RGVDLVVVNPVLVLGP   96 (178)
Q Consensus        79 ~~---~~~~~~i~R~~~v~G~   96 (178)
                      .+   .++.+..++||.+-.+
T Consensus       163 ~e~~~~~i~v~~i~PG~i~t~  183 (225)
T PRK08177        163 AELGEPTLTVLSMHPGWVKTD  183 (225)
T ss_pred             HHhhcCCeEEEEEcCCceecC
Confidence            55   4688999999988543

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.13  E-value=0.011  Score=43.38  Aligned_cols=115  Identities=15%  Similarity=0.072  Sum_probs=70.1

Q ss_pred             chhHHHHHHHHHHHHHh---CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE---AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++..+.+++..   .+-.++|++||.++..+                     ......|+.+|...+.+.+..+
T Consensus       117 ~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~---------------------~~~~~~Y~asKaal~~l~~~la  175 (261)
T PRK08690        117 HEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRA---------------------IPNYNVMGMAKASLEAGIRFTA  175 (261)
T ss_pred             HHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccC---------------------CCCcccchhHHHHHHHHHHHHH
Confidence            46788888777766543   12257999998543221                     0133569999999998877664


Q ss_pred             H---hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           79 V---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        79 ~---~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      .   ..|+.+..+.||.+-.+-.... .. ............+     ...+..++|+|+++..++..+
T Consensus       176 ~e~~~~gIrVn~i~PG~v~T~~~~~~-~~-~~~~~~~~~~~~p-----~~r~~~peevA~~v~~l~s~~  237 (261)
T PRK08690        176 ACLGKEGIRCNGISAGPIKTLAASGI-AD-FGKLLGHVAAHNP-----LRRNVTIEEVGNTAAFLLSDL  237 (261)
T ss_pred             HHhhhcCeEEEEEecCcccchhhhcC-Cc-hHHHHHHHhhcCC-----CCCCCCHHHHHHHHHHHhCcc
Confidence            3   4589999999998854321110 00 0111111111111     123677999999999999754

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=97.11  E-value=0.0022  Score=46.87  Aligned_cols=117  Identities=15%  Similarity=0.051  Sum_probs=72.2

Q ss_pred             chhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++..+++++...   .-.++|++||..+..+.                     .....|+.+|...+.+++.++
T Consensus       113 ~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~la  171 (263)
T PRK06200        113 FNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPG---------------------GGGPLYTASKHAVVGLVRQLA  171 (263)
T ss_pred             eeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCC---------------------CCCchhHHHHHHHHHHHHHHH
Confidence            567999988888887642   22579999995443211                     233569999999999999877


Q ss_pred             Hhc--CCcEEEecCCceeCCCCCCC-C---h---hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           79 VAR--GVDLVVVNPVLVLGPLLQST-V---N---ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        79 ~~~--~~~~~i~R~~~v~G~~~~~~-~---~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      .+.  ++.+..+.||.+..+-.... .   .   ..............     ...-+...+|+++++..++...
T Consensus       172 ~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----p~~r~~~~~eva~~~~fl~s~~  241 (263)
T PRK06200        172 YELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAIT-----PLQFAPQPEDHTGPYVLLASRR  241 (263)
T ss_pred             HHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCC-----CCCCCCCHHHHhhhhhheeccc
Confidence            754  47888899998854421100 0   0   00000111111111     1223677899999999988644

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.10  E-value=0.015  Score=42.57  Aligned_cols=115  Identities=13%  Similarity=0.046  Sum_probs=71.0

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++..+++++...  .-.++|++||.++..+                     ......|+.+|...+.+.+.++.
T Consensus       118 ~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~---------------------~~~~~~Y~asKaal~~l~~~la~  176 (260)
T PRK06603        118 LHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKV---------------------IPNYNVMGVAKAALEASVKYLAN  176 (260)
T ss_pred             HHHHHHHHHHHHHHHHhhhccCceEEEEecCccccC---------------------CCcccchhhHHHHHHHHHHHHHH
Confidence            578999988888876532  1258999998533211                     01235699999999999887765


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +   .|+.+..+.||.+-.+-... .... ...........+     ..-+...+|++++++.++..+
T Consensus       177 el~~~gIrVn~v~PG~v~T~~~~~-~~~~-~~~~~~~~~~~p-----~~r~~~pedva~~~~~L~s~~  237 (260)
T PRK06603        177 DMGENNIRVNAISAGPIKTLASSA-IGDF-STMLKSHAATAP-----LKRNTTQEDVGGAAVYLFSEL  237 (260)
T ss_pred             HhhhcCeEEEEEecCcCcchhhhc-CCCc-HHHHHHHHhcCC-----cCCCCCHHHHHHHHHHHhCcc
Confidence            4   47889999999885432110 0000 111111111111     122567899999999998753

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.07  E-value=0.018  Score=42.00  Aligned_cols=114  Identities=14%  Similarity=0.077  Sum_probs=70.7

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++..+++++...  .-.++|++||.++..+                     ......|+.+|...+.+.+.++.
T Consensus       120 ~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~---------------------~~~~~~Y~asKaal~~l~~~la~  178 (258)
T PRK07533        120 MDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKV---------------------VENYNLMGPVKAALESSVRYLAA  178 (258)
T ss_pred             HhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccC---------------------CccchhhHHHHHHHHHHHHHHHH
Confidence            578999999988877542  1247999988533210                     01235699999999998887665


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      +   .|+.+..+.||.+-.+-.... ... ...........+     ...+...+|++++++.++..
T Consensus       179 el~~~gI~Vn~v~PG~v~T~~~~~~-~~~-~~~~~~~~~~~p-----~~r~~~p~dva~~~~~L~s~  238 (258)
T PRK07533        179 ELGPKGIRVHAISPGPLKTRAASGI-DDF-DALLEDAAERAP-----LRRLVDIDDVGAVAAFLASD  238 (258)
T ss_pred             HhhhcCcEEEEEecCCcCChhhhcc-CCc-HHHHHHHHhcCC-----cCCCCCHHHHHHHHHHHhCh
Confidence            4   478999999998854321110 000 111111111111     12356789999999998865

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=96.94  E-value=0.0038  Score=45.68  Aligned_cols=115  Identities=12%  Similarity=0.057  Sum_probs=71.2

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++..+++++...  .-.++|++||..+..+                     ......|+.+|...+.+.+.++.
T Consensus       119 ~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~---------------------~~~~~~Y~asKaal~~l~~~la~  177 (258)
T PRK07370        119 LEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRA---------------------IPNYNVMGVAKAALEASVRYLAA  177 (258)
T ss_pred             heeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccC---------------------CcccchhhHHHHHHHHHHHHHHH
Confidence            578999988888776541  1258999999533211                     01335799999999999888766


Q ss_pred             hc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        80 ~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.   |+.+..+.||.+-.+-.... ..... .........     ...-+...+|+++++..++..+
T Consensus       178 el~~~gI~Vn~i~PG~v~T~~~~~~-~~~~~-~~~~~~~~~-----p~~r~~~~~dva~~~~fl~s~~  238 (258)
T PRK07370        178 ELGPKNIRVNAISAGPIRTLASSAV-GGILD-MIHHVEEKA-----PLRRTVTQTEVGNTAAFLLSDL  238 (258)
T ss_pred             HhCcCCeEEEEEecCcccCchhhcc-ccchh-hhhhhhhcC-----CcCcCCCHHHHHHHHHHHhChh
Confidence            54   68899999998854321000 00000 111111111     1123566899999999988643

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.92  E-value=0.0065  Score=44.40  Aligned_cols=115  Identities=13%  Similarity=0.074  Sum_probs=70.4

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++..+.+++...  .-.++|++||..+..+                     ......|+.+|...+.+.+.++.
T Consensus       119 ~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~---------------------~~~~~~Y~asKaal~~l~~~la~  177 (257)
T PRK08594        119 QNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERV---------------------VQNYNVMGVAKASLEASVKYLAN  177 (257)
T ss_pred             HhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccC---------------------CCCCchhHHHHHHHHHHHHHHHH
Confidence            467888888777776642  2258999999543221                     01235799999999999887765


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +   .|+.+..+.||.+-.+..... .. ............     ....+...+|++++++.++...
T Consensus       178 el~~~gIrvn~v~PG~v~T~~~~~~-~~-~~~~~~~~~~~~-----p~~r~~~p~~va~~~~~l~s~~  238 (257)
T PRK08594        178 DLGKDGIRVNAISAGPIRTLSAKGV-GG-FNSILKEIEERA-----PLRRTTTQEEVGDTAAFLFSDL  238 (257)
T ss_pred             HhhhcCCEEeeeecCcccCHhHhhh-cc-ccHHHHHHhhcC-----CccccCCHHHHHHHHHHHcCcc
Confidence            4   478999999998854321000 00 000011111111     1123567899999999988654

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.90  E-value=0.0049  Score=45.56  Aligned_cols=114  Identities=18%  Similarity=0.141  Sum_probs=70.7

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++..+.+++...  .-.++|++||.++..+                     ......|+.+|...+.+.+.++.
T Consensus       115 ~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~---------------------~~~~~~Y~asKaal~~l~~~la~  173 (274)
T PRK08415        115 MEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKY---------------------VPHYNVMGVAKAALESSVRYLAV  173 (274)
T ss_pred             hhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccC---------------------CCcchhhhhHHHHHHHHHHHHHH
Confidence            678999998888877642  2257999998533211                     01235699999999999888776


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      +   .|+.+..+.||.+-.+.... .. .............+     ..-+...+|++++++.++..
T Consensus       174 el~~~gIrVn~v~PG~v~T~~~~~-~~-~~~~~~~~~~~~~p-----l~r~~~pedva~~v~fL~s~  233 (274)
T PRK08415        174 DLGKKGIRVNAISAGPIKTLAASG-IG-DFRMILKWNEINAP-----LKKNVSIEEVGNSGMYLLSD  233 (274)
T ss_pred             HhhhcCeEEEEEecCccccHHHhc-cc-hhhHHhhhhhhhCc-----hhccCCHHHHHHHHHHHhhh
Confidence            4   47889999999885431110 00 00001111111111     12256789999999988864

>PRK08339 short chain dehydrogenase; Provisional

Probab=96.86  E-value=0.0079  Score=44.11  Aligned_cols=117  Identities=8%  Similarity=0.025  Sum_probs=67.9

Q ss_pred             chhHHHHHHHH----HHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNV----IVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~l----l~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+    +..+++.+..++|++||.++..+                     ......|+.+|...+.+.+.+
T Consensus       113 ~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~---------------------~~~~~~y~asKaal~~l~~~l  171 (263)
T PRK08339        113 VKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEP---------------------IPNIALSNVVRISMAGLVRTL  171 (263)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCC---------------------CCcchhhHHHHHHHHHHHHHH
Confidence            46676665544    44455556678999999533211                     012356999999999988876


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCCh-------hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVN-------ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+.   |+.+..+.||.+-.+.......       ..............     ...-+...+|+++++..++..+
T Consensus       172 a~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----p~~r~~~p~dva~~v~fL~s~~  243 (263)
T PRK08339        172 AKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPI-----PLGRLGEPEEIGYLVAFLASDL  243 (263)
T ss_pred             HHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccC-----CcccCcCHHHHHHHHHHHhcch
Confidence            6554   6889999999885432100000       00000111111111     1123567899999999888653

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.82  E-value=0.0081  Score=43.98  Aligned_cols=115  Identities=15%  Similarity=0.115  Sum_probs=71.9

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++..+.+++...  +-.++|++||.++..+                     ......|+.+|...+.+.+.++.
T Consensus       117 ~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~---------------------~~~~~~Y~asKaal~~l~~~la~  175 (260)
T PRK06997        117 HDISAYSFPALAKAALPMLSDDASLLTLSYLGAERV---------------------VPNYNTMGLAKASLEASVRYLAV  175 (260)
T ss_pred             HHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccC---------------------CCCcchHHHHHHHHHHHHHHHHH
Confidence            578999998888887652  2358999998543211                     01235699999999999888766


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +   .|+.+..+.||.+-.+-... .. .............+     ..-+..++|+++++..++..+
T Consensus       176 el~~~gIrVn~i~PG~v~T~~~~~-~~-~~~~~~~~~~~~~p-----~~r~~~pedva~~~~~l~s~~  236 (260)
T PRK06997        176 SLGPKGIRANGISAGPIKTLAASG-IK-DFGKILDFVESNAP-----LRRNVTIEEVGNVAAFLLSDL  236 (260)
T ss_pred             HhcccCeEEEEEeeCccccchhcc-cc-chhhHHHHHHhcCc-----ccccCCHHHHHHHHHHHhCcc
Confidence            4   47889999999884421110 00 00111111111111     123577999999999998753

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=96.79  E-value=0.023  Score=41.71  Aligned_cols=109  Identities=17%  Similarity=0.144  Sum_probs=70.7

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHH--
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW--   75 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~--   75 (178)
                      +++|+.+...|-.+..    +.+..++|.++|.+++.+                     ..-.+.|+.||...--+-+  
T Consensus       112 i~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p---------------------~p~~avY~ATKa~v~~fSeaL  170 (265)
T COG0300         112 IQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIP---------------------TPYMAVYSATKAFVLSFSEAL  170 (265)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCC---------------------CcchHHHHHHHHHHHHHHHHH
Confidence            5678888666655554    556679999999655431                     1234679999987655533  


Q ss_pred             -HHHHhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           76 -EEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        76 -~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                       .-.+..|+.++.+.||.+.-+....             .+.......-.+-++..+|+|+..+.+++..
T Consensus       171 ~~EL~~~gV~V~~v~PG~~~T~f~~~-------------~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~  227 (265)
T COG0300         171 REELKGTGVKVTAVCPGPTRTEFFDA-------------KGSDVYLLSPGELVLSPEDVAEAALKALEKG  227 (265)
T ss_pred             HHHhcCCCeEEEEEecCccccccccc-------------cccccccccchhhccCHHHHHHHHHHHHhcC
Confidence             3335568999999999885433210             1111111123456788999999999999775

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=96.74  E-value=0.0082  Score=43.31  Aligned_cols=122  Identities=19%  Similarity=0.135  Sum_probs=74.3

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++..+++++.+.  .-..+|++||.++.-                     +......|+.+|...+.+.+.++.
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~---------------------~~~~~~~y~~sKaal~~l~r~lA~  163 (241)
T PF13561_consen  105 FDINVFSPFLLAQAALPLMKKGGSIINISSIAAQR---------------------PMPGYSAYSASKAALEGLTRSLAK  163 (241)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTS---------------------BSTTTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcc---------------------cCccchhhHHHHHHHHHHHHHHHH
Confidence            567888888888877542  125799999853321                     112345899999999999876543


Q ss_pred             h----cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCcEE
Q 030406           80 A----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGRYL  151 (178)
Q Consensus        80 ~----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~~  151 (178)
                      +    .|+++-.+.||.+..+....  ......+........     ...-+...+|+|+++..++...  -..|..+
T Consensus       164 el~~~~gIrVN~V~pG~i~t~~~~~--~~~~~~~~~~~~~~~-----pl~r~~~~~evA~~v~fL~s~~a~~itG~~i  234 (241)
T PF13561_consen  164 ELAPKKGIRVNAVSPGPIETPMTER--IPGNEEFLEELKKRI-----PLGRLGTPEEVANAVLFLASDAASYITGQVI  234 (241)
T ss_dssp             HHGGHGTEEEEEEEESSBSSHHHHH--HHTHHHHHHHHHHHS-----TTSSHBEHHHHHHHHHHHHSGGGTTGTSEEE
T ss_pred             HhccccCeeeeeecccceeccchhc--cccccchhhhhhhhh-----ccCCCcCHHHHHHHHHHHhCccccCccCCeE
Confidence            3    57888889999886432100  001111222221111     1222568999999999998754  3455443

...

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.69  E-value=0.012  Score=43.44  Aligned_cols=125  Identities=15%  Similarity=0.102  Sum_probs=75.8

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++..+++++...  +-.++|++||.++..+                     ......|+.+|...+.+.+.++.
T Consensus       120 ~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~---------------------~p~~~~Y~asKaal~~l~~~la~  178 (272)
T PRK08159        120 MDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKV---------------------MPHYNVMGVAKAALEASVKYLAV  178 (272)
T ss_pred             HhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccC---------------------CCcchhhhhHHHHHHHHHHHHHH
Confidence            678999999999887753  2358999988432110                     01235699999999999887765


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCCcE-EEe
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASGRY-LCA  153 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~-~~~  153 (178)
                      +   .|+.+..+.||.+-.+-.... . .............+     ..-+...+|++++++.++....  ..|.. .+.
T Consensus       179 el~~~gIrVn~v~PG~v~T~~~~~~-~-~~~~~~~~~~~~~p-----~~r~~~peevA~~~~~L~s~~~~~itG~~i~vd  251 (272)
T PRK08159        179 DLGPKNIRVNAISAGPIKTLAASGI-G-DFRYILKWNEYNAP-----LRRTVTIEEVGDSALYLLSDLSRGVTGEVHHVD  251 (272)
T ss_pred             HhcccCeEEEEeecCCcCCHHHhcC-C-cchHHHHHHHhCCc-----ccccCCHHHHHHHHHHHhCccccCccceEEEEC
Confidence            5   478899999998854211000 0 00111111111111     1125678999999999987542  24544 344


Q ss_pred             c
Q 030406          154 E  154 (178)
Q Consensus       154 ~  154 (178)
                      +
T Consensus       252 g  252 (272)
T PRK08159        252 S  252 (272)
T ss_pred             C
Confidence            4

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.67  E-value=0.006  Score=45.12  Aligned_cols=72  Identities=19%  Similarity=0.057  Sum_probs=50.0

Q ss_pred             CchhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            1 MVEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         1 ~~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      ++++|+.|+..+..++..    .+-.|||.+||+++..+-                     ...+.|..||.+.+.+.+.
T Consensus       118 ~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~---------------------P~~~~Y~ASK~Al~~f~et  176 (282)
T KOG1205|consen  118 VMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPL---------------------PFRSIYSASKHALEGFFET  176 (282)
T ss_pred             HhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCC---------------------CcccccchHHHHHHHHHHH
Confidence            478999998888877753    344689999996543321                     1224799999999999888


Q ss_pred             HHHhcCCcEE----EecCCce
Q 030406           77 EAVARGVDLV----VVNPVLV   93 (178)
Q Consensus        77 ~~~~~~~~~~----i~R~~~v   93 (178)
                      +..+..-..+    .+-||.|
T Consensus       177 LR~El~~~~~~i~i~V~PG~V  197 (282)
T KOG1205|consen  177 LRQELIPLGTIIIILVSPGPI  197 (282)
T ss_pred             HHHHhhccCceEEEEEecCce
Confidence            7666643332    2566665

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=96.66  E-value=0.026  Score=42.19  Aligned_cols=128  Identities=19%  Similarity=0.154  Sum_probs=76.3

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|..|+.++..+..    ++. .|+|++||+++      +.               +.....+|+.||.+.|......
T Consensus       135 l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~G------R~---------------~~p~~g~Y~~SK~aVeaf~D~l  192 (322)
T KOG1610|consen  135 LNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLG------RV---------------ALPALGPYCVSKFAVEAFSDSL  192 (322)
T ss_pred             HhhhhhhHHHHHHHHHHHHHhcc-CeEEEeccccc------Cc---------------cCcccccchhhHHHHHHHHHHH
Confidence            5788888777666654    443 58999999533      11               1135678999999999985543


Q ss_pred             ---HHhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccc----cC------------C-CCcccccHHHHHHHH
Q 030406           78 ---AVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT----YA------------N-SVQAYVHVRDVALAH  137 (178)
Q Consensus        78 ---~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~----~~------------~-~~~~~i~v~D~a~~~  137 (178)
                         ...+|+.+.++-|| +|-+..... ......+.......+..    +|            . ..........+.+++
T Consensus       193 R~EL~~fGV~VsiiePG-~f~T~l~~~-~~~~~~~~~~w~~l~~e~k~~YGedy~~~~~~~~~~~~~~~~~dls~v~~~~  270 (322)
T KOG1610|consen  193 RRELRPFGVKVSIIEPG-FFKTNLANP-EKLEKRMKEIWERLPQETKDEYGEDYFEDYKKSLEKYLSVASADLSPVVDCY  270 (322)
T ss_pred             HHHHHhcCcEEEEeccC-ccccccCCh-HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHH
Confidence               44569999999999 444443321 12222333333222211    11            0 112334455677888


Q ss_pred             HHhhcCCCCCCcEEEe
Q 030406          138 ILVYETPSASGRYLCA  153 (178)
Q Consensus       138 ~~~~~~~~~~~~~~~~  153 (178)
                      .+++....+.-+|..+
T Consensus       271 ~hAlts~~Pr~RY~~g  286 (322)
T KOG1610|consen  271 EHALTSKHPRTRYSPG  286 (322)
T ss_pred             HHHHHhcCcchhcCcc
Confidence            8888776555566544

>PRK06125 short chain dehydrogenase; Provisional

Probab=96.60  E-value=0.016  Score=42.16  Aligned_cols=116  Identities=15%  Similarity=0.002  Sum_probs=69.8

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.+...+.+++.    +.+..++|++||..+..                     +......|+.+|...+.+.+..
T Consensus       109 ~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~---------------------~~~~~~~y~ask~al~~~~~~l  167 (259)
T PRK06125        109 WELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN---------------------PDADYICGSAGNAALMAFTRAL  167 (259)
T ss_pred             HHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC---------------------CCCCchHhHHHHHHHHHHHHHH
Confidence            5678998888887763    34446899998843211                     1123456899999999998876


Q ss_pred             HH---hcCCcEEEecCCceeCCCCCCCCh-------hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AV---ARGVDLVVVNPVLVLGPLLQSTVN-------ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~---~~~~~~~i~R~~~v~G~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.   ..|+++..+.||.+-.+.......       .....+.... ...     ....+..++|++++++.++...
T Consensus       168 a~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~va~~~~~l~~~~  238 (259)
T PRK06125        168 GGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELL-AGL-----PLGRPATPEEVADLVAFLASPR  238 (259)
T ss_pred             HHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHh-ccC-----CcCCCcCHHHHHHHHHHHcCch
Confidence            54   347899999999886542100000       0000000000 000     1123568999999999988643

>PRK07062 short chain dehydrogenase; Provisional

Probab=96.56  E-value=0.021  Score=41.68  Aligned_cols=118  Identities=14%  Similarity=-0.017  Sum_probs=67.1

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+++++    ++.+..++|++||..+..+.                     .....|+.+|...+.+.+..
T Consensus       115 ~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~y~asKaal~~~~~~l  173 (265)
T PRK07062        115 LELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPE---------------------PHMVATSAARAGLLNLVKSL  173 (265)
T ss_pred             HHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCC---------------------CCchHhHHHHHHHHHHHHHH
Confidence            356766665555544    44455789999995432210                     12356999999888887765


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCCh------hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVN------ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      +.+   .|+++..++||.+-.+.......      .....+.+...... ..  ...-+...+|++++++.++..
T Consensus       174 a~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--p~~r~~~p~~va~~~~~L~s~  245 (265)
T PRK07062        174 ATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKK-GI--PLGRLGRPDEAARALFFLASP  245 (265)
T ss_pred             HHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcC-CC--CcCCCCCHHHHHHHHHHHhCc
Confidence            544   47999999999885442111000      00011111110000 00  112356789999999988864

>PRK05884 short chain dehydrogenase; Provisional

Probab=96.54  E-value=0.015  Score=41.57  Aligned_cols=97  Identities=11%  Similarity=0.067  Sum_probs=67.3

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...  .-.++|++||. + .      +                 ....|+.+|...+.+.+.++.
T Consensus       102 ~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~-~-~------~-----------------~~~~Y~asKaal~~~~~~la~  156 (223)
T PRK05884        102 LDATVLSAVLTVQSVGDHLRSGGSIISVVPE-N-P------P-----------------AGSAEAAIKAALSNWTAGQAA  156 (223)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCeEEEEecC-C-C------C-----------------CccccHHHHHHHHHHHHHHHH
Confidence            678999999999888652  22589999983 2 0      1                 235699999999999887766


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +   .|+.+..+.||.+-.+.        .    .... ..        ..-.++|+++++..++..+
T Consensus       157 e~~~~gI~v~~v~PG~v~t~~--------~----~~~~-~~--------p~~~~~~ia~~~~~l~s~~  203 (223)
T PRK05884        157 VFGTRGITINAVACGRSVQPG--------Y----DGLS-RT--------PPPVAAEIARLALFLTTPA  203 (223)
T ss_pred             HhhhcCeEEEEEecCccCchh--------h----hhcc-CC--------CCCCHHHHHHHHHHHcCch
Confidence            4   47889999999884321        0    0000 00        1126899999999987653

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.47  E-value=0.0095  Score=42.45  Aligned_cols=114  Identities=18%  Similarity=0.115  Sum_probs=74.3

Q ss_pred             CchhHHHHHHHHHHHHHhC--CC---CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHH
Q 030406            1 MVEPAVIGTKNVIVAAAEA--KV---RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW   75 (178)
Q Consensus         1 ~~~~nv~~t~~ll~~~~~~--~~---~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~   75 (178)
                      +|++|+.+...|...+.+.  +.   +-++++||.+++-                     |......|+-+|++-+.+.+
T Consensus       112 y~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~---------------------p~~~wa~yc~~KaAr~m~f~  170 (253)
T KOG1204|consen  112 YWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVR---------------------PFSSWAAYCSSKAARNMYFM  170 (253)
T ss_pred             HHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhc---------------------cccHHHHhhhhHHHHHHHHH
Confidence            3788999988888877652  22   7899999965542                     22455789999999999998


Q ss_pred             HHHHhc--CCcEEEecCCceeCCC------CCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           76 EEAVAR--GVDLVVVNPVLVLGPL------LQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        76 ~~~~~~--~~~~~i~R~~~v~G~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      ..+.+.  ++.+..++||.+ -..      ....+.+....+.+.+        ...-..+...+.++.+..+++..
T Consensus       171 ~lA~EEp~~v~vl~~aPGvv-DT~mq~~ir~~~~~~p~~l~~f~el--------~~~~~ll~~~~~a~~l~~L~e~~  238 (253)
T KOG1204|consen  171 VLASEEPFDVRVLNYAPGVV-DTQMQVCIRETSRMTPADLKMFKEL--------KESGQLLDPQVTAKVLAKLLEKG  238 (253)
T ss_pred             HHhhcCccceeEEEccCCcc-cchhHHHHhhccCCCHHHHHHHHHH--------HhcCCcCChhhHHHHHHHHHHhc
Confidence            776554  677888889976 111      0000111111111111        23345677788889998888776

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=96.32  E-value=0.019  Score=54.38  Aligned_cols=74  Identities=16%  Similarity=0.163  Sum_probs=58.2

Q ss_pred             CchhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            1 MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         1 ~~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      ++++|+.|+.+++.++.....++||++||+.+++|..                     ....|+.+|...+.+.+.+..+
T Consensus      2148 v~~~nv~G~~~Ll~al~~~~~~~IV~~SSvag~~G~~---------------------gqs~YaaAkaaL~~la~~la~~ 2206 (2582)
T TIGR02813      2148 VYGTKVDGLLSLLAALNAENIKLLALFSSAAGFYGNT---------------------GQSDYAMSNDILNKAALQLKAL 2206 (2582)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCCCC---------------------CcHHHHHHHHHHHHHHHHHHHH
Confidence            3689999999999999887778899999977766421                     3457999999998888777665


Q ss_pred             c-CCcEEEecCCceeC
Q 030406           81 R-GVDLVVVNPVLVLG   95 (178)
Q Consensus        81 ~-~~~~~i~R~~~v~G   95 (178)
                      . ++++..+.+|.+-|
T Consensus      2207 ~~~irV~sI~wG~wdt 2222 (2582)
T TIGR02813      2207 NPSAKVMSFNWGPWDG 2222 (2582)
T ss_pred             cCCcEEEEEECCeecC
Confidence            5 57778888887644

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.29  E-value=0.14  Score=37.31  Aligned_cols=115  Identities=14%  Similarity=-0.005  Sum_probs=69.3

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++..++.++...  +-.++|++|+. +..+                     ......|+.+|...+.+.+..+.
T Consensus       117 ~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~-~~~~---------------------~~~~~~Y~asKaal~~l~~~la~  174 (256)
T PRK07889        117 LHVSAYSLKSLAKALLPLMNEGGSIVGLDFD-ATVA---------------------WPAYDWMGVAKAALESTNRYLAR  174 (256)
T ss_pred             HHHHhHHHHHHHHHHHHhcccCceEEEEeec-cccc---------------------CCccchhHHHHHHHHHHHHHHHH
Confidence            578999988888777642  22478888752 2100                     01235699999999999887655


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +   .|+.+..+.||.+-.+-.... . .............+    ..+.+...+|+|++++.++...
T Consensus       175 el~~~gIrvn~v~PG~v~T~~~~~~-~-~~~~~~~~~~~~~p----~~~~~~~p~evA~~v~~l~s~~  236 (256)
T PRK07889        175 DLGPRGIRVNLVAAGPIRTLAAKAI-P-GFELLEEGWDERAP----LGWDVKDPTPVARAVVALLSDW  236 (256)
T ss_pred             HhhhcCeEEEeeccCcccChhhhcc-c-CcHHHHHHHHhcCc----cccccCCHHHHHHHHHHHhCcc
Confidence            4   478899999998854321100 0 00111111111111    1123578999999999988754

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=96.18  E-value=0.037  Score=41.67  Aligned_cols=116  Identities=10%  Similarity=0.045  Sum_probs=70.9

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++..+++++...  .--++|++||+.+..+.    +                .....|+.+|...+.+.+.++.
T Consensus       150 ~~vN~~~~~~l~~~~~p~m~~~G~II~isS~a~~~~~----p----------------~~~~~Y~asKaAl~~l~~~la~  209 (303)
T PLN02730        150 ISASSYSFVSLLQHFGPIMNPGGASISLTYIASERII----P----------------GYGGGMSSAKAALESDTRVLAF  209 (303)
T ss_pred             HHHHhHHHHHHHHHHHHHHhcCCEEEEEechhhcCCC----C----------------CCchhhHHHHHHHHHHHHHHHH
Confidence            678999998888877652  12589999995432210    0                1113699999999999888776


Q ss_pred             h----cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           80 A----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        80 ~----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +    .|+.+..+-||.+-.+-... ... ............+     ...+...+|++++++.++...
T Consensus       210 El~~~~gIrVn~V~PG~v~T~~~~~-~~~-~~~~~~~~~~~~p-----l~r~~~peevA~~~~fLaS~~  271 (303)
T PLN02730        210 EAGRKYKIRVNTISAGPLGSRAAKA-IGF-IDDMIEYSYANAP-----LQKELTADEVGNAAAFLASPL  271 (303)
T ss_pred             HhCcCCCeEEEEEeeCCccCchhhc-ccc-cHHHHHHHHhcCC-----CCCCcCHHHHHHHHHHHhCcc
Confidence            4    36788889999885432111 000 0111111111111     112467899999999998643

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.15  E-value=0.039  Score=40.50  Aligned_cols=115  Identities=14%  Similarity=0.066  Sum_probs=69.6

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.+...+.+++...  +-.++|++||.++..+                     ......|+.+|...+.+.+..+.
T Consensus       117 ~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~---------------------~~~~~~Y~asKaal~~l~~~la~  175 (262)
T PRK07984        117 HDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA---------------------IPNYNVMGLAKASLEANVRYMAN  175 (262)
T ss_pred             hhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCC---------------------CCCcchhHHHHHHHHHHHHHHHH
Confidence            567888887777776431  1257999988532110                     01235699999999999988766


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +   .|+.+..+.||.+--+-... .. .............     ...-+...+|++++++.++..+
T Consensus       176 el~~~gIrVn~i~PG~v~T~~~~~-~~-~~~~~~~~~~~~~-----p~~r~~~pedva~~~~~L~s~~  236 (262)
T PRK07984        176 AMGPEGVRVNAISAGPIRTLAASG-IK-DFRKMLAHCEAVT-----PIRRTVTIEDVGNSAAFLCSDL  236 (262)
T ss_pred             HhcccCcEEeeeecCcccchHHhc-CC-chHHHHHHHHHcC-----CCcCCCCHHHHHHHHHHHcCcc
Confidence            4   47888899999885421100 00 0111111111111     1123567899999999988753

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=96.05  E-value=0.043  Score=39.99  Aligned_cols=116  Identities=9%  Similarity=-0.072  Sum_probs=65.6

Q ss_pred             hhHHHHHHHH----HHHHH-hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            3 EPAVIGTKNV----IVAAA-EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         3 ~~nv~~t~~l----l~~~~-~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      .+|+.++..+    +..+. +.+..++|++||.++..                     +..+...|+.+|...+.+.+.+
T Consensus       107 ~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~---------------------~~~~~~~y~~sKaa~~~~~~~l  165 (259)
T PRK08340        107 LLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKE---------------------PMPPLVLADVTRAGLVQLAKGV  165 (259)
T ss_pred             hhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCC---------------------CCCCchHHHHHHHHHHHHHHHH
Confidence            4565554433    33333 23446899999953321                     0123457999999999999987


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChh-------hHHH-HHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNA-------SIIH-ILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+.   |+.+..+.||.+-.+........       .... +........   +  ..-+...+|+++++..++..+
T Consensus       166 a~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p--~~r~~~p~dva~~~~fL~s~~  238 (259)
T PRK08340        166 SRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERT---P--LKRTGRWEELGSLIAFLLSEN  238 (259)
T ss_pred             HHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccC---C--ccCCCCHHHHHHHHHHHcCcc
Confidence            7754   67888899998754321100000       0000 001111111   1  123567899999999988754

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=96.02  E-value=0.027  Score=37.99  Aligned_cols=58  Identities=19%  Similarity=0.052  Sum_probs=45.9

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.+...+.+++...+-.++|++||+++..+.                     .....|+.+|...+.+.+.++++
T Consensus       108 ~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------------------~~~~~Y~askaal~~~~~~la~e  165 (167)
T PF00106_consen  108 FRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGS---------------------PGMSAYSASKAALRGLTQSLAAE  165 (167)
T ss_dssp             HHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSS---------------------TTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccceeeeeeehheeccccceEEecchhhccCC---------------------CCChhHHHHHHHHHHHHHHHHHh
Confidence            67899999999999987556789999996554321                     24467999999999999987764

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.97  E-value=0.047  Score=41.00  Aligned_cols=116  Identities=9%  Similarity=0.050  Sum_probs=70.6

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...  .-.++|++||+.+..+.    +                .....|+.+|...+.+.+.++.
T Consensus       149 ~~vNl~g~~~l~~a~~p~m~~~G~ii~iss~~~~~~~----p----------------~~~~~Y~asKaAl~~lt~~la~  208 (299)
T PRK06300        149 LSTSSYSFVSLLSHFGPIMNPGGSTISLTYLASMRAV----P----------------GYGGGMSSAKAALESDTKVLAW  208 (299)
T ss_pred             HHHHhHHHHHHHHHHHHHhhcCCeEEEEeehhhcCcC----C----------------CccHHHHHHHHHHHHHHHHHHH
Confidence            578999999998888752  22478988885443210    0                0113699999999999887765


Q ss_pred             h----cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           80 A----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        80 ~----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +    +|+.+..+.||.+--+-... .. .............+     ...+...+|+++++..++..+
T Consensus       209 el~~~~gIrVn~V~PG~v~T~~~~~-~~-~~~~~~~~~~~~~p-----~~r~~~peevA~~v~~L~s~~  270 (299)
T PRK06300        209 EAGRRWGIRVNTISAGPLASRAGKA-IG-FIERMVDYYQDWAP-----LPEPMEAEQVGAAAAFLVSPL  270 (299)
T ss_pred             HhCCCCCeEEEEEEeCCccChhhhc-cc-ccHHHHHHHHhcCC-----CCCCcCHHHHHHHHHHHhCcc
Confidence            4    37889999999885432110 00 00011111111111     122457899999999887653

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.95  E-value=0.13  Score=38.97  Aligned_cols=90  Identities=21%  Similarity=0.091  Sum_probs=56.6

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhh-cccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFC-KNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~-~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +.+|..|+..|.+.+.    +..-.|+|++||...  +.... ..+.-.|..      . ......|+.||.+......+
T Consensus       140 ~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~--~~~~~-~~~l~~~~~------~~~~~~~~Y~~SKla~~l~~~e  210 (314)
T KOG1208|consen  140 FATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG--GGKID-LKDLSGEKA------KLYSSDAAYALSKLANVLLANE  210 (314)
T ss_pred             ehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc--cCccc-hhhccchhc------cCccchhHHHHhHHHHHHHHHH
Confidence            5678888766665554    443379999999533  11100 000011211      1 12333599999999999888


Q ss_pred             HHHhc--CCcEEEecCCceeCCCCCC
Q 030406           77 EAVAR--GVDLVVVNPVLVLGPLLQS  100 (178)
Q Consensus        77 ~~~~~--~~~~~i~R~~~v~G~~~~~  100 (178)
                      ++++.  |+.+..+.||.+-.+....
T Consensus       211 L~k~l~~~V~~~~~hPG~v~t~~l~r  236 (314)
T KOG1208|consen  211 LAKRLKKGVTTYSVHPGVVKTTGLSR  236 (314)
T ss_pred             HHHHhhcCceEEEECCCcccccceec
Confidence            87777  5889999999997765444

>PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis []

Probab=95.92  E-value=0.032  Score=42.93  Aligned_cols=59  Identities=15%  Similarity=0.132  Sum_probs=44.2

Q ss_pred             hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcCC-cEEEecCCceeCC
Q 030406           18 EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGV-DLVVVNPVLVLGP   96 (178)
Q Consensus        18 ~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~-~~~i~R~~~v~G~   96 (178)
                      +.+.|++|.++|+...                      ..+...+|-.+|..-|.-+...... .+ ..+|+|||.+.|.
T Consensus       246 ~~~~K~~vIvTSfn~~----------------------~~s~~f~Yfk~K~~LE~dl~~~l~~-~l~~lvILRPGplvG~  302 (410)
T PF08732_consen  246 NTGNKKLVIVTSFNNN----------------------AISSMFPYFKTKGELENDLQNLLPP-KLKHLVILRPGPLVGE  302 (410)
T ss_pred             cCCCceEEEEEecCcc----------------------hhhhhhhhhHHHHHHHHHHHhhccc-ccceEEEecCccccCC
Confidence            5678999999985321                      1245578999999999999875431 23 5889999999997


Q ss_pred             CCC
Q 030406           97 LLQ   99 (178)
Q Consensus        97 ~~~   99 (178)
                      +..
T Consensus       303 h~~  305 (410)
T PF08732_consen  303 HGS  305 (410)
T ss_pred             CCC
Confidence            655

It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage.

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=95.83  E-value=0.046  Score=39.04  Aligned_cols=74  Identities=19%  Similarity=0.086  Sum_probs=49.1

Q ss_pred             chhHHHHHHHHHHHHH----hCCCC-----------EEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVR-----------RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYG   66 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~-----------~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s   66 (178)
                      +++|..|+..+.+++.    ++..+           .+|++||.++-.+.  .                ...+...|..|
T Consensus       113 ~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~--~----------------~~~~~~AYrmS  174 (249)
T KOG1611|consen  113 YETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGG--F----------------RPGGLSAYRMS  174 (249)
T ss_pred             hhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCC--C----------------CCcchhhhHhh
Confidence            5778888766665543    33334           79989985432111  0                22467889999


Q ss_pred             HHHHHHHHHHHHHhc---CCcEEEecCCce
Q 030406           67 KAVAEKAAWEEAVAR---GVDLVVVNPVLV   93 (178)
Q Consensus        67 K~~~E~~~~~~~~~~---~~~~~i~R~~~v   93 (178)
                      |.+.-...++..-+.   ++-++.+.||+|
T Consensus       175 KaAlN~f~ksls~dL~~~~ilv~sihPGwV  204 (249)
T KOG1611|consen  175 KAALNMFAKSLSVDLKDDHILVVSIHPGWV  204 (249)
T ss_pred             HHHHHHHHHHhhhhhcCCcEEEEEecCCeE
Confidence            999998877654433   456677899998

>PRK12367 short chain dehydrogenase; Provisional

Probab=95.79  E-value=0.21  Score=36.35  Aligned_cols=96  Identities=8%  Similarity=-0.039  Sum_probs=56.5

Q ss_pred             chhHHHHHHHHHHHHHhC-------CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA-------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAA   74 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-------~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~   74 (178)
                      +++|+.++.++++++...       +-..++..||.+...      +                .....|+.||...+.+.
T Consensus       104 ~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~------~----------------~~~~~Y~aSKaal~~~~  161 (245)
T PRK12367        104 LEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ------P----------------ALSPSYEISKRLIGQLV  161 (245)
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC------C----------------CCCchhHHHHHHHHHHH
Confidence            678999999999987642       112344444422110      0                12346999999976543


Q ss_pred             ---HHHH---HhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           75 ---WEEA---VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        75 ---~~~~---~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                         .+..   ...++.+..+.|+.+-.+-                 .        ....+..+|+|+.++.+++++
T Consensus       162 ~l~~~l~~e~~~~~i~v~~~~pg~~~t~~-----------------~--------~~~~~~~~~vA~~i~~~~~~~  212 (245)
T PRK12367        162 SLKKNLLDKNERKKLIIRKLILGPFRSEL-----------------N--------PIGIMSADFVAKQILDQANLG  212 (245)
T ss_pred             HHHHHHHHhhcccccEEEEecCCCccccc-----------------C--------ccCCCCHHHHHHHHHHHHhcC
Confidence               1111   2346667777776542110                 0        012577899999999988765

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.70  E-value=0.15  Score=38.00  Aligned_cols=108  Identities=17%  Similarity=0.140  Sum_probs=71.6

Q ss_pred             chhHHHHH----HHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGT----KNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t----~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.+.    ++++-.+.+.+-.++|-++|.++..+.                     ....+|+.||.++.-..+.+
T Consensus       142 ~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~---------------------~gl~~YcaSK~a~vGfhesL  200 (300)
T KOG1201|consen  142 FDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGP---------------------AGLADYCASKFAAVGFHESL  200 (300)
T ss_pred             HHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCC---------------------ccchhhhhhHHHHHHHHHHH
Confidence            57788775    455666666666799999996554431                     24567999999987765554


Q ss_pred             H------HhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCC
Q 030406           78 A------VARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSAS  147 (178)
Q Consensus        78 ~------~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~  147 (178)
                      .      ...|++++.+.|+.+= .+              +..+  ...-......+..+.+|+.++.+....+..
T Consensus       201 ~~EL~~~~~~~IktTlv~P~~i~-Tg--------------mf~~--~~~~~~l~P~L~p~~va~~Iv~ai~~n~~~  259 (300)
T KOG1201|consen  201 SMELRALGKDGIKTTLVCPYFIN-TG--------------MFDG--ATPFPTLAPLLEPEYVAKRIVEAILTNQAG  259 (300)
T ss_pred             HHHHHhcCCCCeeEEEEeeeecc-cc--------------ccCC--CCCCccccCCCCHHHHHHHHHHHHHcCCcc
Confidence            3      2336888888888772 11              1111  111135677889999999999998876553

>PRK08303 short chain dehydrogenase; Provisional

Probab=95.54  E-value=0.13  Score=38.72  Aligned_cols=120  Identities=15%  Similarity=0.040  Sum_probs=66.9

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..++.++..    .+-.+||++||..+.++..                  +......|+.+|.....+.+.+
T Consensus       128 ~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~------------------~~~~~~~Y~asKaal~~lt~~L  189 (305)
T PRK08303        128 LRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNAT------------------HYRLSVFYDLAKTSVNRLAFSL  189 (305)
T ss_pred             HHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCc------------------CCCCcchhHHHHHHHHHHHHHH
Confidence            46688887777666653    3335899999843322110                  0012346999999999998876


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+.   |+.+..+.||.+-.+-........-..+.... ...+.    ..-+...+|++++++.++..+
T Consensus       190 a~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~p~----~~~~~~peevA~~v~fL~s~~  254 (305)
T PRK08303        190 AHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDAL-AKEPH----FAISETPRYVGRAVAALAADP  254 (305)
T ss_pred             HHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhh-ccccc----cccCCCHHHHHHHHHHHHcCc
Confidence            6544   68888899987743210000000000000000 00010    112346899999999988765

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=95.43  E-value=0.52  Score=34.92  Aligned_cols=120  Identities=18%  Similarity=0.099  Sum_probs=69.4

Q ss_pred             chhHHHH-HHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIG-TKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~-t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.| +..+..++..    .+-..++++||.++....                    ..+...|+.+|...+++.+.
T Consensus       118 ~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~--------------------~~~~~~Y~~sK~al~~ltr~  177 (270)
T KOG0725|consen  118 MATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPG--------------------PGSGVAYGVSKAALLQLTRS  177 (270)
T ss_pred             HhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCC--------------------CCCcccchhHHHHHHHHHHH
Confidence            5788884 6666666653    345678888884332110                    01227899999999999887


Q ss_pred             HHH---hcCCcEEEecCCceeCCCCC-CCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           77 EAV---ARGVDLVVVNPVLVLGPLLQ-STVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        77 ~~~---~~~~~~~i~R~~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      .+.   .+|+++-.+-||.+..+-.. .........+.+... .....  -.-.+.-.+|+++.+..++...
T Consensus       178 lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~-~~~~~--p~gr~g~~~eva~~~~fla~~~  246 (270)
T KOG0725|consen  178 LAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATD-SKGAV--PLGRVGTPEEVAEAAAFLASDD  246 (270)
T ss_pred             HHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhc-ccccc--ccCCccCHHHHHHhHHhhcCcc
Confidence            554   44788888999988765411 100001111111100 01010  1223455899999998887764

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=95.37  E-value=0.088  Score=38.04  Aligned_cols=70  Identities=23%  Similarity=0.256  Sum_probs=49.6

Q ss_pred             chhHHHHHHHHHHHHHhC-CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhccc-CchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT-KNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.+...+..++... .-+++|++||..+. ..                     .+ ...|+.||...+.+.+.++.
T Consensus       115 ~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~---------------------~~~~~~Y~~sK~al~~~~~~l~~  172 (251)
T COG1028         115 IDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GG---------------------PPGQAAYAASKAALIGLTKALAL  172 (251)
T ss_pred             HHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CC---------------------CCCcchHHHHHHHHHHHHHHHHH
Confidence            578888888888744432 11289999995332 11                     12 36799999999998887764


Q ss_pred             h---cCCcEEEecCCce
Q 030406           80 A---RGVDLVVVNPVLV   93 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v   93 (178)
                      +   .|+.+..+.||.+
T Consensus       173 e~~~~gi~v~~v~PG~~  189 (251)
T COG1028         173 ELAPRGIRVNAVAPGYI  189 (251)
T ss_pred             HHhhhCcEEEEEEeccC
Confidence            4   5788999999954

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=95.31  E-value=0.12  Score=35.76  Aligned_cols=68  Identities=24%  Similarity=0.247  Sum_probs=53.7

Q ss_pred             hhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcC
Q 030406            3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG   82 (178)
Q Consensus         3 ~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~   82 (178)
                      ..-+.|+.+|.++......+.+|..||+++++|..                     ....|+..-...+.+.+.. +..|
T Consensus       110 ~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~---------------------gq~~YaaAN~~lda~a~~~-~~~g  167 (181)
T PF08659_consen  110 APKVRGLWNLHEALENRPLDFFILFSSISSLLGGP---------------------GQSAYAAANAFLDALARQR-RSRG  167 (181)
T ss_dssp             HHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-T---------------------TBHHHHHHHHHHHHHHHHH-HHTT
T ss_pred             hhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCc---------------------chHhHHHHHHHHHHHHHHH-HhCC
Confidence            45688999999999988899999999988887632                     4477999999999888864 4568


Q ss_pred             CcEEEecCCc
Q 030406           83 VDLVVVNPVL   92 (178)
Q Consensus        83 ~~~~i~R~~~   92 (178)
                      .+++.+..+.
T Consensus       168 ~~~~sI~wg~  177 (181)
T PF08659_consen  168 LPAVSINWGA  177 (181)
T ss_dssp             SEEEEEEE-E
T ss_pred             CCEEEEEccc
Confidence            8988877653

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=94.98  E-value=0.48  Score=37.30  Aligned_cols=95  Identities=12%  Similarity=-0.009  Sum_probs=54.0

Q ss_pred             chhHHHHHHHHHHHHHh----CC---CCE-EEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK---VRR-VVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKA   73 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~---~~~-~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~   73 (178)
                      +++|+.++.++++++..    .+   .+. +|.+|+ +...                     + .....|+.||.+.+.+
T Consensus       270 ~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~~---------------------~-~~~~~Y~ASKaAl~~l  326 (406)
T PRK07424        270 YEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEVN---------------------P-AFSPLYELSKRALGDL  326 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cccc---------------------C-CCchHHHHHHHHHHHH
Confidence            57899999999998753    22   123 344443 2210                     0 1124699999999887


Q ss_pred             HHHHHHhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           74 AWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        74 ~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      ..-.....++.+..+.|    |+....    .                 .....+..+|+|+.++.+++++
T Consensus       327 ~~l~~~~~~~~I~~i~~----gp~~t~----~-----------------~~~~~~spe~vA~~il~~i~~~  372 (406)
T PRK07424        327 VTLRRLDAPCVVRKLIL----GPFKSN----L-----------------NPIGVMSADWVAKQILKLAKRD  372 (406)
T ss_pred             HHHHHhCCCCceEEEEe----CCCcCC----C-----------------CcCCCCCHHHHHHHHHHHHHCC
Confidence            53222222333333333    332111    0                 0112478999999999999765

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=93.90  E-value=0.65  Score=35.00  Aligned_cols=112  Identities=24%  Similarity=0.192  Sum_probs=66.7

Q ss_pred             chhHHHHHHHHHHHHHhC-C-CC---EEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHH----HHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA-K-VR---RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKA----VAEK   72 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-~-~~---~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~----~~E~   72 (178)
                      +++|-.|+.|++.++... + .+   +++.+||..+.++=                     ..-+.|..+|.    +++.
T Consensus       140 m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i---------------------~GysaYs~sK~alrgLa~~  198 (331)
T KOG1210|consen  140 MDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGI---------------------YGYSAYSPSKFALRGLAEA  198 (331)
T ss_pred             HHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCc---------------------ccccccccHHHHHHHHHHH
Confidence            578999999999887642 1 22   89999997666541                     23344555554    4555


Q ss_pred             HHHHHHHhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           73 AAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        73 ~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +-++. ..+|+.++..-|+.+--|+.... +...+...+.        .+...+.+..+++|++++.=+.+.
T Consensus       199 l~qE~-i~~~v~Vt~~~P~~~~tpGfE~E-n~tkP~~t~i--------i~g~ss~~~~e~~a~~~~~~~~rg  260 (331)
T KOG1210|consen  199 LRQEL-IKYGVHVTLYYPPDTLTPGFERE-NKTKPEETKI--------IEGGSSVIKCEEMAKAIVKGMKRG  260 (331)
T ss_pred             HHHHH-hhcceEEEEEcCCCCCCCccccc-cccCchheee--------ecCCCCCcCHHHHHHHHHhHHhhc
Confidence            44443 34588899999998876652221 1111111111        233444577888888887766554

>PTZ00325 malate dehydrogenase; Provisional

Probab=93.77  E-value=0.058  Score=40.93  Aligned_cols=89  Identities=16%  Similarity=0.100  Sum_probs=61.0

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +..|+..++++++++++++++++|+++| .-+........ ..+.+.+      ...|...||.+-+..-|+-...++..
T Consensus        98 l~~N~~i~~~i~~~i~~~~~~~iviv~S-NPvdv~~~~~~-~~~~~~s------g~p~~~viG~g~LDs~R~r~~la~~l  169 (321)
T PTZ00325         98 FNTNAPIVRDLVAAVASSAPKAIVGIVS-NPVNSTVPIAA-ETLKKAG------VYDPRKLFGVTTLDVVRARKFVAEAL  169 (321)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCeEEEEec-CcHHHHHHHHH-hhhhhcc------CCChhheeechhHHHHHHHHHHHHHh
Confidence            5679999999999999999999999999 33322110000 0001111      22466678877677777777778888


Q ss_pred             CCcEEEecCCceeCCCCC
Q 030406           82 GVDLVVVNPVLVLGPLLQ   99 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~   99 (178)
                      +++..-++ +.|+|.+..
T Consensus       170 ~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        170 GMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             CcChhheE-EEEEeecCC
Confidence            88888887 778887654

>PRK08862 short chain dehydrogenase; Provisional

Probab=93.30  E-value=0.81  Score=32.78  Aligned_cols=70  Identities=10%  Similarity=-0.137  Sum_probs=46.7

Q ss_pred             hhHHHHHHHHHHHH----HhCC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            3 EPAVIGTKNVIVAA----AEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         3 ~~nv~~t~~ll~~~----~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      ++|+.++..++.++    ++.+ -..+|++||. ..+      +                 ....|+.+|...+.+.+..
T Consensus       113 ~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~-~~~------~-----------------~~~~Y~asKaal~~~~~~l  168 (227)
T PRK08862        113 SSLASTLFTYGQVAAERMRKRNKKGVIVNVISH-DDH------Q-----------------DLTGVESSNALVSGFTHSW  168 (227)
T ss_pred             HHhhHHHHHHHHHHHHHHHhcCCCceEEEEecC-CCC------C-----------------CcchhHHHHHHHHHHHHHH
Confidence            45666665554443    3332 3589999983 211      0                 2346999999999988776


Q ss_pred             HHh---cCCcEEEecCCceeCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGP   96 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~   96 (178)
                      +.+   .++.+..+.||.+-.+
T Consensus       169 a~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        169 AKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             HHHHhhcCcEEEEEecCcCcCC
Confidence            553   5799999999988554

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=92.34  E-value=0.18  Score=34.79  Aligned_cols=112  Identities=21%  Similarity=0.206  Sum_probs=68.1

Q ss_pred             chhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      |++|+.+..++.+...+.    + -..++.+||.++.-                     +..-.+.|..+|.+-+.+-+.
T Consensus       105 F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R---------------------~~~nHtvYcatKaALDmlTk~  163 (245)
T KOG1207|consen  105 FAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIR---------------------PLDNHTVYCATKAALDMLTKC  163 (245)
T ss_pred             eeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccc---------------------ccCCceEEeecHHHHHHHHHH
Confidence            466777776666664331    2 13589999964421                     224567899999999999888


Q ss_pred             HHHhcC---CcEEEecCCcee---CCCCCCCChhhHHHHHHHHhCCccccCC-CCcccccHHHHHHHHHHhhcCCC
Q 030406           77 EAVARG---VDLVVVNPVLVL---GPLLQSTVNASIIHILKYLNGSAKTYAN-SVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        77 ~~~~~~---~~~~i~R~~~v~---G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                      .+-+.|   +++-.+.|..|+   |...+.....           +.++... -..-|..++.+++++..++....
T Consensus       164 lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K-----------~k~mL~riPl~rFaEV~eVVnA~lfLLSd~s  228 (245)
T KOG1207|consen  164 LALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDK-----------KKKMLDRIPLKRFAEVDEVVNAVLFLLSDNS  228 (245)
T ss_pred             HHHhhCcceeEeeccCCeEEEecccccccCCchh-----------ccchhhhCchhhhhHHHHHHhhheeeeecCc
Confidence            777765   445567787775   3332221100           0111111 22346779999999988887653

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=90.77  E-value=1.6  Score=30.81  Aligned_cols=114  Identities=18%  Similarity=0.160  Sum_probs=64.2

Q ss_pred             chhHHHHHHHHHHHHHhC----CC--CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----KV--RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW   75 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~~--~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~   75 (178)
                      +.+|+.|+..+.+++.+.    +.  -.+|.+||+-...|+....-   +          ...-...-+.+|.++.++. 
T Consensus       118 i~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtn---Y----------AAsK~GvIgftktaArEla-  183 (256)
T KOG1200|consen  118 IAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTN---Y----------AASKGGVIGFTKTAARELA-  183 (256)
T ss_pred             HHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchh---h----------hhhcCceeeeeHHHHHHHh-
Confidence            467889988888877653    22  28999999744433221100   1          1122334455566665553 


Q ss_pred             HHHHhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhc
Q 030406           76 EEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYE  142 (178)
Q Consensus        76 ~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  142 (178)
                          +.++++-++-||+|--|- ..   ..-+.+.+.+.+..|.     ..+-..+|+|..++.+..
T Consensus       184 ----~knIrvN~VlPGFI~tpM-T~---~mp~~v~~ki~~~iPm-----gr~G~~EevA~~V~fLAS  237 (256)
T KOG1200|consen  184 ----RKNIRVNVVLPGFIATPM-TE---AMPPKVLDKILGMIPM-----GRLGEAEEVANLVLFLAS  237 (256)
T ss_pred             ----hcCceEeEeccccccChh-hh---hcCHHHHHHHHccCCc-----cccCCHHHHHHHHHHHhc
Confidence                337999999999885432 11   1112233333333322     223457899998888773

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=89.37  E-value=0.4  Score=34.22  Aligned_cols=71  Identities=20%  Similarity=0.073  Sum_probs=48.6

Q ss_pred             chhHHHHHHHHHHHHHhC--C-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH-
Q 030406            2 VEPAVIGTKNVIVAAAEA--K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE-   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~-   77 (178)
                      +++|+-|..+++++....  + -..+|+++|+.++.+                     ..-.+.|..||.+...+.+.. 
T Consensus       109 f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vp---------------------fpf~~iYsAsKAAihay~~tLr  167 (289)
T KOG1209|consen  109 FKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVP---------------------FPFGSIYSASKAAIHAYARTLR  167 (289)
T ss_pred             hccceeeeehHHHHHHHHHHHccceEEEecceeEEec---------------------cchhhhhhHHHHHHHHhhhhcE
Confidence            678999988888877631  1 247999999755432                     124467999999887775542 


Q ss_pred             --HHhcCCcEEEecCCce
Q 030406           78 --AVARGVDLVVVNPVLV   93 (178)
Q Consensus        78 --~~~~~~~~~i~R~~~v   93 (178)
                        .+-+|++++.+.+|.|
T Consensus       168 lEl~PFgv~Vin~itGGv  185 (289)
T KOG1209|consen  168 LELKPFGVRVINAITGGV  185 (289)
T ss_pred             EeeeccccEEEEecccce
Confidence              2334777777777766

>PLN00106 malate dehydrogenase

Probab=88.90  E-value=0.22  Score=37.93  Aligned_cols=87  Identities=18%  Similarity=0.050  Sum_probs=59.5

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      ++.|+..++++.+.+++++.+.+|+++| .=+-+   ..+  ..+...+.  .....|...||.+++..+|+-..+++..
T Consensus       108 l~~N~~i~~~i~~~i~~~~p~aivivvS-NPvD~---~~~--i~t~~~~~--~s~~p~~~viG~~~LDs~Rl~~~lA~~l  179 (323)
T PLN00106        108 FNINAGIVKTLCEAVAKHCPNALVNIIS-NPVNS---TVP--IAAEVLKK--AGVYDPKKLFGVTTLDVVRANTFVAEKK  179 (323)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCeEEEEeC-CCccc---cHH--HHHHHHHH--cCCCCcceEEEEecchHHHHHHHHHHHh
Confidence            4679999999999999999999999888 21100   000  01110000  0123567889999999999999999999


Q ss_pred             CCcEEEecCCceeCCC
Q 030406           82 GVDLVVVNPVLVLGPL   97 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~   97 (178)
                      |++..-++-. |+|.+
T Consensus       180 gv~~~~V~~~-ViGeH  194 (323)
T PLN00106        180 GLDPADVDVP-VVGGH  194 (323)
T ss_pred             CCChhheEEE-EEEeC
Confidence            9988877544 55544

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=87.16  E-value=5.5  Score=28.91  Aligned_cols=119  Identities=16%  Similarity=0.062  Sum_probs=65.3

Q ss_pred             HHHHHHHHHHHHhC--C-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHH-----HH
Q 030406            6 VIGTKNVIVAAAEA--K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW-----EE   77 (178)
Q Consensus         6 v~~t~~ll~~~~~~--~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~-----~~   77 (178)
                      +.+|...+.++.+.  | -.-+|.+||...+++-+                     -...|+.||+..=-.-+     .|
T Consensus       111 in~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p---------------------~~pVY~AsKaGVvgFTRSla~~ay  169 (261)
T KOG4169|consen  111 INGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMP---------------------VFPVYAASKAGVVGFTRSLADLAY  169 (261)
T ss_pred             hhhhhhhhhhhhhhcCCCCcEEEEeccccccCccc---------------------cchhhhhcccceeeeehhhhhhhh
Confidence            34566677777652  2 34688999854443211                     22346666664432222     25


Q ss_pred             HHhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCC------CCcccccHHHHHHHHHHhhcCCCCCCcEE
Q 030406           78 AVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYAN------SVQAYVHVRDVALAHILVYETPSASGRYL  151 (178)
Q Consensus        78 ~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~i~v~D~a~~~~~~~~~~~~~~~~~  151 (178)
                      .++.|+.+..+.||.+--.        ....+...  +...-..+      ....--...+++..++.++|.+..+..|.
T Consensus       170 y~~sGV~~~avCPG~t~t~--------l~~~~~~~--~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE~~~NGaiw~  239 (261)
T KOG4169|consen  170 YQRSGVRFNAVCPGFTRTD--------LAENIDAS--GGYLEYSDSIKEALERAPKQSPACCAINIVNAIEYPKNGAIWK  239 (261)
T ss_pred             HhhcCEEEEEECCCcchHH--------HHHHHHhc--CCcccccHHHHHHHHHcccCCHHHHHHHHHHHHhhccCCcEEE
Confidence            5677999999999976210        00011000  00000100      01112346789999999999977777887


Q ss_pred             EecC
Q 030406          152 CAES  155 (178)
Q Consensus       152 ~~~~  155 (178)
                      ++..
T Consensus       240 v~~g  243 (261)
T KOG4169|consen  240 VDSG  243 (261)
T ss_pred             EecC
Confidence            7543

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=85.46  E-value=3.2  Score=29.63  Aligned_cols=73  Identities=16%  Similarity=0.122  Sum_probs=48.9

Q ss_pred             hhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHH---HH
Q 030406            3 EPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKA---AW   75 (178)
Q Consensus         3 ~~nv~~t~~ll~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~---~~   75 (178)
                      .+|..++.+|..+...+    .---+|.+||.-++.+.                     ...-.|..+|.+..-+   ++
T Consensus       109 ~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm---------------------~~~PvYcaTKAaiHsyt~aLR  167 (245)
T COG3967         109 ATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPM---------------------ASTPVYCATKAAIHSYTLALR  167 (245)
T ss_pred             HHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcc---------------------cccccchhhHHHHHHHHHHHH
Confidence            57888888887777643    34579999995444321                     2234588888887765   45


Q ss_pred             HHHHhcCCcEEEecCCceeCC
Q 030406           76 EEAVARGVDLVVVNPVLVLGP   96 (178)
Q Consensus        76 ~~~~~~~~~~~i~R~~~v~G~   96 (178)
                      +..+..++.++=+-|+.|--+
T Consensus       168 ~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         168 EQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHhhhcceEEEEecCCceecC
Confidence            555555788888888888543

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=85.33  E-value=0.44  Score=36.28  Aligned_cols=85  Identities=11%  Similarity=-0.001  Sum_probs=58.1

Q ss_pred             chhHHHHHHHHHHHHHhCCC-C-EEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKV-R-RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~-~-~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      ++.|+.-.+.+...+.+++- . .+|.+|-...+.-       ......+     .-..+...||.+++..+|+...+++
T Consensus       100 l~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t-------~~~~k~s-----g~~p~~~ViG~t~LDs~Rl~~~la~  167 (322)
T cd01338         100 LKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNA-------LIAMKNA-----PDIPPDNFTAMTRLDHNRAKSQLAK  167 (322)
T ss_pred             HHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHH-------HHHHHHc-----CCCChHheEEehHHHHHHHHHHHHH
Confidence            56789999999999988652 3 4555443211000       0000100     0023556899999999999999999


Q ss_pred             hcCCcEEEecCCceeCCCC
Q 030406           80 ARGVDLVVVNPVLVLGPLL   98 (178)
Q Consensus        80 ~~~~~~~i~R~~~v~G~~~   98 (178)
                      ..|++...+|..+|||++.
T Consensus       168 ~lgv~~~~v~~~~V~GeHG  186 (322)
T cd01338         168 KAGVPVTDVKNMVIWGNHS  186 (322)
T ss_pred             HhCcChhHeEEEEEEeCCc
Confidence            9999999999999999873

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=82.51  E-value=4.9  Score=29.71  Aligned_cols=84  Identities=19%  Similarity=0.162  Sum_probs=51.2

Q ss_pred             CchhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            1 MVEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         1 ~~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +|++||-|..-++....    ..+..++|.+||..+ -  ...     ++=++.    .......+|..||++.+.+--.
T Consensus       143 iFetnVFGhfyli~~l~pll~~~~~~~lvwtSS~~a-~--kk~-----lsleD~----q~~kg~~pY~sSKrl~DlLh~A  210 (341)
T KOG1478|consen  143 IFETNVFGHFYLIRELEPLLCHSDNPQLVWTSSRMA-R--KKN-----LSLEDF----QHSKGKEPYSSSKRLTDLLHVA  210 (341)
T ss_pred             HhhhcccchhhhHhhhhhHhhcCCCCeEEEEeeccc-c--ccc-----CCHHHH----hhhcCCCCcchhHHHHHHHHHH
Confidence            47889999866665554    334558999999522 1  111     211111    1235667899999999987554


Q ss_pred             HHHhc---CCcEEEecCCceeCC
Q 030406           77 EAVAR---GVDLVVVNPVLVLGP   96 (178)
Q Consensus        77 ~~~~~---~~~~~i~R~~~v~G~   96 (178)
                      ..+..   |+.-.++.||.....
T Consensus       211 ~~~~~~~~g~~qyvv~pg~~tt~  233 (341)
T KOG1478|consen  211 LNRNFKPLGINQYVVQPGIFTTN  233 (341)
T ss_pred             HhccccccchhhhcccCceeecc
Confidence            43332   566677888866543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	178
2c29_D	337	Structure Of Dihydroflavonol Reductase From Vitis V		1e-12
2rh8_A	338	Structure Of Apo Anthocyanidin Reductase From Vitis		5e-09
2p4h_X	322	Crystal Structure Of Vestitone Reductase From Alfal		2e-05

>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 6/157 (3%)
Query: 26  FTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK--NW-YCYGXXXXXXXXXXXXXXRX 82
           FTSS G V +  ++ P  V DESCWSD+EFC+  K   W Y                   
Sbjct: 125 FTSSAGTVNIQEHQLP--VYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENN 182
Query: 83  XXXXXXXXXXXXXXXXQSTVNASIIHILKYLNGSAKTYANSVQA-YVHVRDVALAHILVY 141
                            S++  S+I  L  + G+   Y+   Q  +VH+ D+  AHI ++
Sbjct: 183 IDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLF 242
Query: 142 ETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTK 178
           E P A GRY+C+       ++ ++L + +PEY IPT+
Sbjct: 243 ENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTE 279

>pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 74/190 (38%), Gaps = 14/190 (7%)
Query: 1   MVEPAVIGTKNXXXX-XXXXXXXXXXFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT 59
           M++PA+ G  N                TSS  AV ++       VVDE  W+D+EF  + 
Sbjct: 102 MIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSA 161
Query: 60  K--NW-YCYGXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXQSTVNASIIHILKYLNGS 116
           K   W Y                                    S V +SI   +  + G+
Sbjct: 162 KPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGN 221
Query: 117 ---------AKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILA 167
                     +  + SV +  HV DV  AHI V E  SASGRY+C  +     E+ + L+
Sbjct: 222 EFLINGMKGMQMLSGSV-SIAHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLS 280
Query: 168 KFFPEYPIPT 177
           K +P+Y +PT
Sbjct: 281 KRYPQYKVPT 290

>pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Query: 26  FTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK--NW-YCYGXXXXXXXXXXXXXXRX 82
           +TSS  AV    N    DV+DES WSD++  ++ K   W Y                   
Sbjct: 122 YTSSGSAVSF--NGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNG 179
Query: 83  XXXXXXXXXXXXXXXXQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYE 142
                              +  SI   L  + G  +    +    VHV DVA AHI + E
Sbjct: 180 IDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLE 239
Query: 143 TPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPT 177
                GRY C+  ++   E+ ++L+  +PEY I T
Sbjct: 240 NSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILT 274

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	178
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	1e-90
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	1e-90
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	2e-89
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	9e-70
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	1e-46
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	4e-42
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	2e-10
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	3e-10
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	6e-09
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	7e-09
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	3e-08
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	3e-07
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	3e-07
1xq6_A	253	Unknown protein; structural genomics, protein stru	5e-07
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	1e-06
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	3e-06
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	3e-06
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	1e-05
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	1e-05
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	3e-05
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	4e-05
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	5e-05
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	5e-05
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	6e-05
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	8e-05
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	8e-05
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	1e-04
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	1e-04
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	2e-04
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	2e-04
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	4e-04
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	6e-04
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	7e-04

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score =  266 bits (682), Expect = 1e-90
 Identities = 56/182 (30%), Positives = 91/182 (50%), Gaps = 6/182 (3%)

Query: 1   MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT 59
           + +  V G   ++ A   +K V+R ++TSS  AV  +      DV+DES WSD++  ++ 
Sbjct: 96  VTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGK--DKDVLDESDWSDVDLLRSV 153

Query: 60  KNW---YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS 116
           K +   Y   K +AEKA  E     G+D+V +    ++G  +   +  SI   L  + G 
Sbjct: 154 KPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGK 213

Query: 117 AKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIP 176
            +    +    VHV DVA AHI + E     GRY C+  ++   E+ ++L+  +PEY I 
Sbjct: 214 KEQIGVTRFHMVHVDDVARAHIYLLENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQIL 273

Query: 177 TK 178
           T 
Sbjct: 274 TV 275

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score =  266 bits (683), Expect = 1e-90
 Identities = 69/183 (37%), Positives = 108/183 (59%), Gaps = 7/183 (3%)

Query: 1   MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFC--- 56
           +++P + G   ++ + A AK VRR+VFTSS G V +  +     V DESCWSD+EFC   
Sbjct: 99  VIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEH--QLPVYDESCWSDMEFCRAK 156

Query: 57  KNTKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS 116
           K T   Y   K +AE+AAW+ A    +D + + P LV+GP + S++  S+I  L  + G+
Sbjct: 157 KMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGN 216

Query: 117 AKTYANSVQ-AYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPI 175
              Y+   Q  +VH+ D+  AHI ++E P A GRY+C+       ++ ++L + +PEY I
Sbjct: 217 EAHYSIIRQGQFVHLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNI 276

Query: 176 PTK 178
           PT+
Sbjct: 277 PTE 279

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score =  264 bits (676), Expect = 2e-89
 Identities = 70/190 (36%), Positives = 99/190 (52%), Gaps = 12/190 (6%)

Query: 1   MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFC--- 56
           M++PA+ G  NV+ A   AK V+RV+ TSS  AV ++       VVDE  W+D+EF    
Sbjct: 102 MIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSA 161

Query: 57  KNTKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS 116
           K     Y   K +AEKAAW+ A    +DL+ V P L+ G  L S V +SI   +  + G+
Sbjct: 162 KPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGN 221

Query: 117 --------AKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAK 168
                        +   +  HV DV  AHI V E  SASGRY+C  +     E+ + L+K
Sbjct: 222 EFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSK 281

Query: 169 FFPEYPIPTK 178
            +P+Y +PT 
Sbjct: 282 RYPQYKVPTD 291

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score =  214 bits (546), Expect = 9e-70
 Identities = 43/196 (21%), Positives = 65/196 (33%), Gaps = 18/196 (9%)

Query: 1   MVEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFC--- 56
           +V PA+ GT N + AAA    V+R V TSS  +  +         +DE  W+        
Sbjct: 103 VVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAK 162

Query: 57  -------KNTKNWYCYGKAVAEKAAWEEAVARGV--DLVVVNPVLVLGPLLQSTVNA--S 105
                  + +   Y   K  AE AAW+          L  V P   +G +      +  +
Sbjct: 163 TLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGST 222

Query: 106 IIHILKYLNGSAKTYANSV--QAYVHVRDVALAHILVYETPSASG-RYLCAESVLHRGEV 162
              ++   NG        +  Q YV   D+ L H+     P     R            V
Sbjct: 223 SGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTV 282

Query: 163 VEILAKFFPEYPIPTK 178
           +    K +P    P  
Sbjct: 283 LATFRKLYPSKTFPAD 298

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  154 bits (392), Expect = 1e-46
 Identities = 36/179 (20%), Positives = 63/179 (35%), Gaps = 11/179 (6%)

Query: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
            V  A+  T     A  +A+V R+++  S  A+   P   P     E  + D     + K
Sbjct: 98  EVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLP---GHEGLFYD--SLPSGK 152

Query: 61  NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
           + Y   K   ++ A  E    G+ +V+  P +VLG L        +  I    NG    Y
Sbjct: 153 SSYVLCKWALDEQAR-EQARNGLPVVIGIPGMVLGELDIGPTTGRV--ITAIGNGEMTHY 209

Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFF---PEYPIP 176
               +  +   +     ++  E      RYL     L   ++   +A+        P+ 
Sbjct: 210 VAGQRNVIDAAEAGRGLLMALERGRIGERYLLTGHNLEMADLTRRIAELLGQPAPQPMS 268

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score =  139 bits (353), Expect = 4e-42
 Identities = 26/163 (15%), Positives = 52/163 (31%), Gaps = 21/163 (12%)

Query: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
           + +  +     +I    +A V R +     G++++ P     D             +  +
Sbjct: 84  IYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMD-----------SGEVPE 132

Query: 61  NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
           N     KA+ E         + +D V  +P   + P +++          +Y  G     
Sbjct: 133 NILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTG---------RYRLGKDDMI 183

Query: 121 ANSV-QAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEV 162
            + V  +++ V D A A I   E P           + H    
Sbjct: 184 VDIVGNSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHHHHH 226

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 57.3 bits (139), Expect = 2e-10
 Identities = 33/181 (18%), Positives = 65/181 (35%), Gaps = 21/181 (11%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
           + GT N++ AA + +V +VV  S+I  V+     +P + V              +  +  
Sbjct: 89  MNGTYNILEAAKQHRVEKVVIPSTI-GVFGPE--TPKNKVPSITI------TRPRTMFGV 139

Query: 66  GKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNAS--IIHILKYL--NGSAKTYA 121
            K  AE          G+D+  +    ++    + T   +   + I  Y       K Y 
Sbjct: 140 TKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYL 199

Query: 122 NSVQA--YVHVRDVALAHILVYETPSASGRY-----LCAESVLHRGEVVEILAKFFPEYP 174
              +A   +++ D   A + +YE             + A +     E+   + +  PE+ 
Sbjct: 200 APNRALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTAYTFTPS-ELYSKIKERIPEFE 258

Query: 175 I 175
           I
Sbjct: 259 I 259

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 56.8 bits (138), Expect = 3e-10
 Identities = 28/149 (18%), Positives = 48/149 (32%), Gaps = 16/149 (10%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
           V+ T  ++ A  +A V R+VFTS+   VY +    P     E          +  + Y  
Sbjct: 91  VLATYRLLEAMRKAGVSRIVFTST-STVYGEAKVIP---TPEDY------PTHPISLYGA 140

Query: 66  GKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT--YANS 123
            K   E           +   +     V+G   +ST       I+K      +     N 
Sbjct: 141 SKLACEALIESYCHTFDMQAWIYRFANVIGR--RSTHGVIYDFIMKLKRNPEELEILGNG 198

Query: 124 VQA--YVHVRDVALAHILVYETPSASGRY 150
            Q   Y+++ D   A +           +
Sbjct: 199 EQNKSYIYISDCVDAMLFGLRGDERVNIF 227

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 52.3 bits (125), Expect = 6e-09
 Identities = 17/147 (11%), Positives = 48/147 (32%), Gaps = 17/147 (11%)

Query: 3   EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNW 62
           E  V    ++I         R++      ++ +D + +   +++     +         +
Sbjct: 77  EKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNT--LLESKGLREAP-------Y 127

Query: 63  YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYAN 122
           Y   +A A++    ++         ++P  +  P  + T +  I                
Sbjct: 128 YPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPG-ERTGDYQIGKDHLLFGSDGN---- 182

Query: 123 SVQAYVHVRDVALAHILVYETPSASGR 149
              +++ + D A+A +   E P+    
Sbjct: 183 ---SFISMEDYAIAVLDEIERPNHLNE 206

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 52.5 bits (127), Expect = 7e-09
 Identities = 40/149 (26%), Positives = 55/149 (36%), Gaps = 20/149 (13%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
           V+ T NV+  A +  VR VVF SS   VY D +  P     E      E      +   Y
Sbjct: 90  VVATFNVLEWARQTGVRTVVFASS-STVYGDADVIP---TPE------EEPYKPIS--VY 137

Query: 66  G--KAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT--YA 121
           G  KA  E      A   GV  + V    V+GP L+  V      I+K            
Sbjct: 138 GAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHGVIY--DFIMKLRRNPNVLEVLG 195

Query: 122 NSVQA--YVHVRDVALAHILVYETPSASG 148
           +  Q   Y++VRD   A +  ++      
Sbjct: 196 DGTQRKSYLYVRDAVEATLAAWKKFEEMD 224

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 51.0 bits (123), Expect = 3e-08
 Identities = 30/172 (17%), Positives = 56/172 (32%), Gaps = 33/172 (19%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
           V G+ NV  AA++A V+R++   +    Y  P   P   +        +        Y  
Sbjct: 113 VQGSINVAKAASKAGVKRLLNFQT-ALCYGRPATVP---IPI------DSPTAPFTSYGI 162

Query: 66  GKAVAEKAAWEEAVARGVDLVVV-----NPVLVLGPLLQSTVNASIIHILKYLNGSAKTY 120
            K   E            D+ VV     N     GP L            +   G     
Sbjct: 163 SKTAGEA------FLMMSDVPVVSLRLANVT---GPRLAIGPIP--TFYKRLKAGQKCFC 211

Query: 121 ANSVQAYVHVRDVALAHILVYETPSASGRYLCAE----SVLHRGEVVEILAK 168
           +++V+ ++ + D      L  +    +G +  +     S+    EV +++  
Sbjct: 212 SDTVRDFLDMSDFLAIADLSLQEGRPTGVFNVSTGEGHSIK---EVFDVVLD 260

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 48.1 bits (115), Expect = 3e-07
 Identities = 12/38 (31%), Positives = 17/38 (44%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDD 43
           +IG  N+  AA      R+VF SS   +   P  +  D
Sbjct: 87  IIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRID 124

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 48.0 bits (114), Expect = 3e-07
 Identities = 16/97 (16%), Positives = 30/97 (30%), Gaps = 1/97 (1%)

Query: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAV-YMDPNRSPDDVVDESCWSDLEFCKNT 59
           +  P V GT  +I  A   K++   + S+      ++P+   +D                
Sbjct: 186 LFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGW 245

Query: 60  KNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGP 96
              Y   K   E    E      + + V    ++L  
Sbjct: 246 AGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILAD 282

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 47.2 bits (112), Expect = 5e-07
 Identities = 25/143 (17%), Positives = 39/143 (27%), Gaps = 31/143 (21%)

Query: 8   GTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGK 67
           G KN I AA  A V+ +V   S+G         P + +                      
Sbjct: 112 GQKNQIDAAKVAGVKHIVVVGSMGG---TNPDHPLNKLGNG------------------N 150

Query: 68  AVAEKAAWEEAVAR-GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQA 126
            +  K   E+ +A  G    ++    +L                + L G       +   
Sbjct: 151 ILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGV---------RELLVGKDDELLQTDTK 201

Query: 127 YVHVRDVALAHILVYETPSASGR 149
            V   DVA   I       A  +
Sbjct: 202 TVPRADVAEVCIQALLFEEAKNK 224

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 46.3 bits (110), Expect = 1e-06
 Identities = 37/202 (18%), Positives = 63/202 (31%), Gaps = 32/202 (15%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDV---VDESCWSDLE-FCKNTKN 61
           VIGT NV+ A  E      +        Y  PN   ++    +  +  +D   + K   +
Sbjct: 131 VIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASS 190

Query: 62  WYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYA 121
           +Y   K            A G+    +N  +V G     T     +      +    T  
Sbjct: 191 FYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTAL 250

Query: 122 NS--VQA-----------------YVHVRDVALAHILVYETPSASGRY----LCAE--SV 156
           N   VQA                 Y+ +RD      +    P+ +G +       E  SV
Sbjct: 251 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSV 310

Query: 157 LHRGEVVEILAKFFPEYPIPTK 178
               E+  ++ K   +  +  K
Sbjct: 311 N---ELASLVTKAGSKLGLDVK 329

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 45.2 bits (108), Expect = 3e-06
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 4/44 (9%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVY-MDPNRSPDDVVDES 48
           ++G  N++ A  +  V ++VF S+ GA+Y   P        +E+
Sbjct: 94  LLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGER---AEET 134

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 45.0 bits (107), Expect = 3e-06
 Identities = 11/38 (28%), Positives = 15/38 (39%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDD 43
           +IG  N+  AA      R+VF SS   +   P      
Sbjct: 88  IIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLG 125

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 43.3 bits (103), Expect = 1e-05
 Identities = 28/150 (18%), Positives = 56/150 (37%), Gaps = 18/150 (12%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
            I T+N+  A  E  +  +V+ S+  + Y D    P    +E      +        Y  
Sbjct: 86  EILTQNLYDACYENNISNIVYAST-ISAYSDETSLP---WNE------KELPLPDLMYGV 135

Query: 66  GKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHIL--KYLNGSAKT-YAN 122
            K   E      +  +G+ +  +    + G   +      +I+    +  +G   T +AN
Sbjct: 136 SKLACEHIGNIYSRKKGLCIKNLRFAHLYGF-NEKN--NYMINRFFRQAFHGEQLTLHAN 192

Query: 123 SVQA--YVHVRDVALAHILVYETPSASGRY 150
           SV    +++ +D A + I   +    SG +
Sbjct: 193 SVAKREFLYAKDAAKSVIYALKQEKVSGTF 222

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 25/167 (14%), Positives = 52/167 (31%), Gaps = 37/167 (22%)

Query: 8   GTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGK 67
           G   ++ AA +A+V+R +  S+I ++  +                     +    Y   K
Sbjct: 85  GAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGF--------------DALKDYYIAK 130

Query: 68  AVAEKAAWEEAVARGVDLVVVNP-VLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQA 126
             A+    +E     +D  ++ P  L             +I I   ++ S          
Sbjct: 131 HFADLYLTKE---TNLDYTIIQPGALTEEE------ATGLIDINDEVSAS---------- 171

Query: 127 YVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEY 173
              + DVA     +  T  + G+ +       +  + E L      +
Sbjct: 172 -NTIGDVADTIKELVMTDHSIGKVI--SMHNGKTAIKEALESLLEHH 215

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 42.3 bits (100), Expect = 3e-05
 Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSP 41
           + G  N+++AA +AKV+   + +S  + Y D    P
Sbjct: 130 IDGFLNMLIAARDAKVQSFTYAAS-SSTYGDHPGLP 164

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 41.1 bits (97), Expect = 4e-05
 Identities = 19/144 (13%), Positives = 36/144 (25%), Gaps = 38/144 (26%)

Query: 8   GTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGK 67
           G +N++ A     V +VV  +S   ++ DP + P                          
Sbjct: 90  GARNIVAAMKAHGVDKVVACTSAFLLW-DPTKVPPR---------------------LQA 127

Query: 68  AVAEKAAWEEAV-ARGVDLVVVNP-VLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQ 125
              +     + +   G+  V V P  +   PL                  +         
Sbjct: 128 VTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTG--------------AYTVTLDGRGPS 173

Query: 126 AYVHVRDVALAHILVYETPSASGR 149
             +   D+    +    T    G 
Sbjct: 174 RVISKHDLGHFMLRCLTTDEYDGH 197

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 41.5 bits (98), Expect = 5e-05
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVY 34
           ++G  NVI A  +  + +V+  S+  A  
Sbjct: 119 IMGASNVINACLKNAISQVIALSTDKAAN 147

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 41.4 bits (98), Expect = 5e-05
 Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 1/36 (2%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSP 41
           V   ++++       V +VV  S+   VY   +  P
Sbjct: 96  VDSGRHLLALCTSVGVPKVVVGST-CEVYGQADTLP 130

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 41.2 bits (97), Expect = 6e-05
 Identities = 26/143 (18%), Positives = 46/143 (32%), Gaps = 37/143 (25%)

Query: 8   GTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGK 67
           G    I  A +  ++R +  SS+G V  DP++ P                   N   Y  
Sbjct: 110 GAIKTIQEAEKRGIKRFIMVSSVGTV--DPDQGPM------------------NMRHYLV 149

Query: 68  AVAEKAAWEEAVAR-GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQA 126
           A   K   ++ + R  +D  +V P  +      ST   ++      +  S          
Sbjct: 150 A---KRLADDELKRSSLDYTIVRPGPLSNEE--STGKVTVSPHFSEITRS---------- 194

Query: 127 YVHVRDVALAHILVYETPSASGR 149
            +   DVA     + +     G+
Sbjct: 195 -ITRHDVAKVIAELVDQQHTIGK 216

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 41.1 bits (97), Expect = 8e-05
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDV 44
            +G  NV+ AA +  V R V+  +     + P + P  +
Sbjct: 114 CVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRL 152

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 40.8 bits (95), Expect = 8e-05
 Identities = 17/145 (11%), Positives = 42/145 (28%), Gaps = 18/145 (12%)

Query: 5   AVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYC 64
            +    +++     +    V    S   + M     P  +      +   +       Y 
Sbjct: 82  HLDFATHLVSLLRNSDTLAVFILGSAS-LAMPGADHPMILDFPESAASQPWYDGALYQY- 139

Query: 65  YGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSV 124
                         +   V+ + ++P         ++  A    +L   +G         
Sbjct: 140 -------YEYQFLQMNANVNWIGISPSEAFPSGPATSYVAGKDTLLVGEDG--------- 183

Query: 125 QAYVHVRDVALAHILVYETPSASGR 149
           Q+++   ++ALA +   E P+A   
Sbjct: 184 QSHITTGNMALAILDQLEHPTAIRD 208

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 8/44 (18%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNR--SPDDVVDE 47
           +    +V+  A   K++++ + SSI        +  +P   + E
Sbjct: 95  MNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIME 138

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 29/168 (17%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
           V G +N + A   A ++ V F SS G VY       ++ +DE      +           
Sbjct: 86  VEGLRNTLSALEGAPLQHVFFVSSTG-VYGQ---EVEEWLDEDTPPIAK--------DFS 133

Query: 66  GKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYA-NSV 124
           GK + E     EA+       ++    + GP          + +++      +  A N+ 
Sbjct: 134 GKRMLE----AEALLAAYSSTILRFSGIYGP--------GRLRMIRQAQTPEQWPARNAW 181

Query: 125 QAYVHVRDVA--LAHILVYETPSASGR-Y-LCAESVLHRGEVVEILAK 168
              +H  D A  +A+++   + +   R Y +     L   +++  LA 
Sbjct: 182 TNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLAD 229

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 15/91 (16%), Positives = 33/91 (36%), Gaps = 3/91 (3%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
            + + N+I AA    ++R  + SS   +Y +  +           SD  +    ++ +  
Sbjct: 122 TMISFNMIEAARINGIKRFFYASSA-CIYPEFKQLETT-NVSLKESDA-WPAEPQDAFGL 178

Query: 66  GKAVAEKAAWEEAVARGVDLVVVNPVLVLGP 96
            K   E+         G++  +     + GP
Sbjct: 179 EKLATEELCKHYNKDFGIECRIGRFHNIYGP 209

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 39/189 (20%), Positives = 64/189 (33%), Gaps = 39/189 (20%)

Query: 6   VIGTKNVIVAAAEAKVR-----RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
           + GT+ +  A   A  +     RVVFTSSI AV+  P   P   + +             
Sbjct: 113 LDGTRYLFDAIRIANGKDGYKPRVVFTSSI-AVFGAPLPYP---IPDEFH------TTPL 162

Query: 61  NWYCYGKAVAEKAAWEEAVARGVDLVVV-NPVLVLGPLLQSTVNAS--IIHILK------ 111
             Y   KA+ E    + +     D + +  P  +     +    AS    +IL+      
Sbjct: 163 TSYGTQKAICELLLSDYSRRGFFDGIGIRLPT-ICIRPGKPNAAASGFFSNILREPLVGQ 221

Query: 112 ----YLNGSAKTYANS----VQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVV 163
                +  S + +  S    V   +H   + +  +      S  G      +V   GE +
Sbjct: 222 EAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSA---TV---GEQI 275

Query: 164 EILAKFFPE 172
           E L K   E
Sbjct: 276 EALRKVAGE 284

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSP--DDVVDE 47
           + G  N++ AA  A+V+   + +S  + Y D    P  ++ +  
Sbjct: 128 ITGFLNILHAAKNAQVQSFTYAAS-SSTYGDHPALPKVEENIGN 170

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 38.2 bits (89), Expect = 6e-04
 Identities = 29/164 (17%), Positives = 50/164 (30%), Gaps = 42/164 (25%)

Query: 3   EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNW 62
           E   I   +VI A     V+R++F  S+G     P +  +                  N 
Sbjct: 99  EDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEW-----------------NN 141

Query: 63  YCYGKAVAEKAAWEEAV-ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYA 121
              G+ +       +A+ A G++  ++ P  +            I + L   N   K   
Sbjct: 142 AVIGEPLKPFRRAADAIEASGLEYTILRPAWLTD-------EDIIDYELTSRNEPFKG-- 192

Query: 122 NSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEI 165
                 V  + VA     + + P             H GE + I
Sbjct: 193 ----TIVSRKSVAALITDIIDKPEK-----------HIGENIGI 221

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 38.1 bits (89), Expect = 7e-04
 Identities = 26/165 (15%), Positives = 44/165 (26%), Gaps = 28/165 (16%)

Query: 6   VIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYC 64
            + T  +       K +++VV++++  ++        DD         +    N      
Sbjct: 127 TLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTF---DDAKATEETDIVSLHNND---SP 180

Query: 65  YG--KAVAEK--AAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIH------------ 108
           Y   K   E     + +     +  V      V GP                        
Sbjct: 181 YSMSKIFGEFYSVYYHK--QHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTF 238

Query: 109 ILKYLNGSAKT-YANSVQ--AYVHVRDVALAHILVYETPSASGRY 150
           I K L G         V    ++ V DVA   I      +  G Y
Sbjct: 239 IYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTPGGVY 283

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	178
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.95
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.95
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.95
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.94
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.94
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.94
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.94
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.93
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.93
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.93
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.93
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.93
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.93
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.93
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.93
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.93
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.93
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.93
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.92
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.92
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.92
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.92
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.92
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.92
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.92
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.92
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.92
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.92
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.92
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.92
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.92
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.92
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.92
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.92
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.92
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.91
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.91
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.91
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.91
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.91
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.91
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.91
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.9
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.9
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.9
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.89
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.89
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.89
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.89
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.89
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.89
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.89
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.88
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.88
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.88
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.88
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.88
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.88
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.87
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.87
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.86
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.85
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.84
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.83
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.83
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.82
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.82
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.78
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.77
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.77
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.77
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.76
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.76
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.72
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.71
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.71
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.68
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.67
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.66
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.63
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.56
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.56
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.46
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.44
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.43
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.42
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.42
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.33
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.31
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.31
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.3
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.27
1spx_A	278	Short-chain reductase family member (5L265); paral	99.26
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.24
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.23
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.22
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.19
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.14
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.12
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.12
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.12
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.11
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.11
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.1
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.1
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.1
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.09
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.09
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.07
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.06
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.06
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.05
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.05
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.05
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.04
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.04
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.04
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.03
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.02
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.01
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.01
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.01
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	98.99
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	98.99
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	98.98
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	98.98
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	98.97
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	98.97
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	98.95
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	98.94
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	98.94
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	98.94
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	98.94
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	98.94
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	98.93
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	98.93
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	98.92
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	98.92
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	98.91
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	98.91
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	98.91
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	98.91
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	98.9
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	98.9
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	98.9
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	98.89
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	98.89
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	98.89
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	98.89
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	98.89
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	98.89
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	98.88
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	98.87
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	98.87
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	98.86
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	98.86
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	98.85
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	98.85
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	98.85
3imf_A	257	Short chain dehydrogenase; structural genomics, in	98.85
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	98.85
3rih_A	293	Short chain dehydrogenase or reductase; structural	98.85
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	98.84
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	98.84
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	98.84
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	98.84
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	98.83
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	98.83
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	98.83
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	98.83
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	98.83
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	98.82
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	98.82
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	98.82
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	98.81
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	98.81
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	98.81
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	98.81
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	98.81
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	98.81
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	98.8
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	98.8
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	98.8
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	98.8
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	98.79
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	98.79
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	98.79
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	98.78
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	98.78
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	98.78
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	98.78
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	98.78
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	98.78
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	98.77
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	98.77
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	98.77
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	98.76
3cxt_A	291	Dehydrogenase with different specificities; rossma	98.76
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	98.76
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	98.76
4dqx_A	277	Probable oxidoreductase protein; structural genomi	98.76
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	98.76
4e4y_A	244	Short chain dehydrogenase family protein; structur	98.75
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	98.75
1xhl_A	297	Short-chain dehydrogenase/reductase family member	98.75
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	98.75
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	98.74
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	98.73
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	98.73
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	98.73
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	98.73
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	98.73
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	98.73
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	98.73
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	98.73
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.72
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	98.71
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	98.71
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	98.7
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	98.7
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	98.69
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	98.69
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	98.69
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.69
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	98.69
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	98.68
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	98.68
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	98.68
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	98.67
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	98.67
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	98.67
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	98.67
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	98.66
1xkq_A	280	Short-chain reductase family member (5D234); parra	98.66
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	98.66
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	98.66
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	98.65
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	98.65
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	98.65
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	98.64
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	98.64
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	98.64
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.63
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	98.63
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	98.63
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	98.62
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	98.6
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	98.59
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	98.59
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	98.59
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	98.59
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	98.58
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	98.57
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	98.57
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	98.57
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	98.57
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	98.56
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	98.56
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	98.56
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	98.56
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	98.56
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	98.54
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.54
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	98.53
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	98.53
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	98.51
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	98.51
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	98.5
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	98.48
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	98.47
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	98.47
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	98.45
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	98.45
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	98.45
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.43
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	98.41
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	98.41
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	98.4
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	98.39
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	98.38
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	98.36
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	98.27
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	98.25
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	98.24
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	98.2
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	98.17
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	98.11
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	98.07
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	98.03
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	97.96
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	97.92
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	97.87
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.79
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.72
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.65
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	97.65
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	97.64
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.63
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.61
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.41
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.27
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	97.14
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	96.94
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.58
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	96.21
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.08
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	95.62
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	95.04
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	95.02
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	93.04
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	91.99
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	91.94
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	91.32
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	87.95

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.95  E-value=3.4e-27  Score=175.36  Aligned_cols=159  Identities=18%  Similarity=0.180  Sum_probs=131.7

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+.....+   ++|++      +..|.+.|+.+|..+|++++.+..+.
T Consensus        82 ~~~n~~~~~~ll~a~~~~~~~r~v~~SS-~~vyg~~~~~~---~~E~~------~~~p~~~Y~~sK~~~E~~~~~~~~~~  151 (311)
T 3m2p_A           82 FHDNEILTQNLYDACYENNISNIVYAST-ISAYSDETSLP---WNEKE------LPLPDLMYGVSKLACEHIGNIYSRKK  151 (311)
T ss_dssp             THHHHHHHHHHHHHHHHTTCCEEEEEEE-GGGCCCGGGCS---BCTTS------CCCCSSHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEEcc-HHHhCCCCCCC---CCCCC------CCCCCchhHHHHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999 68887655444   88887      55788999999999999999999889


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHH-HHHHhCCccc---cCCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecCc
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHI-LKYLNGSAKT---YANSVQAYVHVRDVALAHILVYETPSASGRYLC-AESV  156 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~~  156 (178)
                      |++++++||+++||+.....  ..+..+ .....+....   .+++.++|+|++|+|++++.+++.+..++.||+ ++++
T Consensus       152 g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~i~~~~~  229 (311)
T 3m2p_A          152 GLCIKNLRFAHLYGFNEKNN--YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNIGSGDA  229 (311)
T ss_dssp             CCEEEEEEECEEECSCC--C--CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTCCEEEEECCSCE
T ss_pred             CCCEEEEeeCceeCcCCCCC--CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCCCCeEEeCCCCc
Confidence            99999999999999986543  233333 3444555533   257789999999999999999998876678986 5788


Q ss_pred             cCHHHHHHHHHHhCCC
Q 030406          157 LHRGEVVEILAKFFPE  172 (178)
Q Consensus       157 ~s~~e~~~~i~~~~~~  172 (178)
                      +|+.|+++.+++.++.
T Consensus       230 ~s~~e~~~~i~~~~g~  245 (311)
T 3m2p_A          230 LTNYEVANTINNAFGN  245 (311)
T ss_dssp             ECHHHHHHHHHHHTTC
T ss_pred             ccHHHHHHHHHHHhCC
Confidence            9999999999999864

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.95  E-value=1.5e-26  Score=172.00  Aligned_cols=159  Identities=17%  Similarity=0.173  Sum_probs=130.1

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+.....+   ++|+.      +..|.+.|+.+|..+|.+++.++.+.
T Consensus        87 ~~~nv~~~~~l~~~~~~~~~~~iv~~SS-~~vyg~~~~~~---~~E~~------~~~~~~~Y~~sK~~~e~~~~~~~~~~  156 (313)
T 3ehe_A           87 YRNNVLATYRLLEAMRKAGVSRIVFTST-STVYGEAKVIP---TPEDY------PTHPISLYGASKLACEALIESYCHTF  156 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEECC-GGGGCSCSSSS---BCTTS------CCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHcCCCeEEEeCc-hHHhCcCCCCC---CCCCC------CCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            5789999999999999999999999999 68898765544   78876      45688999999999999999999999


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCcc--cc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecCc
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK--TY--ANSVQAYVHVRDVALAHILVYETPSASGRYLC-AESV  156 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~~  156 (178)
                      |++++++||+++||++....  .....+.....+..+  ..  +++.++|+|++|+|++++.+++....++.||+ ++++
T Consensus       157 g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ni~~~~~  234 (313)
T 3ehe_A          157 DMQAWIYRFANVIGRRSTHG--VIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVNIFNIGSEDQ  234 (313)
T ss_dssp             TCEEEEEECSCEESTTCCCS--HHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCSSEEEEECCCSCC
T ss_pred             CCCEEEEeeccccCcCCCcC--hHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCCCCceEEECCCCC
Confidence            99999999999999976542  222334445555332  23  46789999999999999999995555668986 5679


Q ss_pred             cCHHHHHHHHHHhCCC
Q 030406          157 LHRGEVVEILAKFFPE  172 (178)
Q Consensus       157 ~s~~e~~~~i~~~~~~  172 (178)
                      +|+.|+++.+++.++.
T Consensus       235 ~s~~e~~~~i~~~~g~  250 (313)
T 3ehe_A          235 IKVKRIAEIVCEELGL  250 (313)
T ss_dssp             EEHHHHHHHHHHHTTC
T ss_pred             eeHHHHHHHHHHHhCC
Confidence            9999999999999853

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.95  E-value=2.1e-26  Score=173.27  Aligned_cols=160  Identities=20%  Similarity=0.185  Sum_probs=130.9

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+....  ..+++|++      +..|.+.|+.+|..+|++++.++.++
T Consensus       122 ~~~nv~~~~~ll~a~~~~~~~~~v~~SS-~~vy~~~~~--~~~~~E~~------~~~p~~~Y~~sK~~~E~~~~~~~~~~  192 (346)
T 4egb_A          122 YDTNVIGTVTLLELVKKYPHIKLVQVST-DEVYGSLGK--TGRFTEET------PLAPNSPYSSSKASADMIALAYYKTY  192 (346)
T ss_dssp             HHHHTHHHHHHHHHHHHSTTSEEEEEEE-GGGGCCCCS--SCCBCTTS------CCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEEEEeCc-hHHhCCCCc--CCCcCCCC------CCCCCChhHHHHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999 688876532  12388887      55788999999999999999999888


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHH-HHHHHhCCcc-cc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecCc
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIH-ILKYLNGSAK-TY--ANSVQAYVHVRDVALAHILVYETPSASGRYLC-AESV  156 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~-~~~~~~~~~~-~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~~  156 (178)
                      |++++++||+++||++....  ..+.. +.....+... ..  +++.++|+|++|+|++++.+++.+..++.|++ ++++
T Consensus       193 g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~i~~~~~  270 (346)
T 4egb_A          193 QLPVIVTRCSNNYGPYQYPE--KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGRVGEVYNIGGNNE  270 (346)
T ss_dssp             CCCEEEEEECEEESTTCCTT--SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCCTTCEEEECCSCC
T ss_pred             CCCEEEEeecceeCcCCCcc--chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCCCCCEEEECCCCc
Confidence            99999999999999986443  23333 3345555543 22  56789999999999999999998876679987 5677


Q ss_pred             cCHHHHHHHHHHhCCC
Q 030406          157 LHRGEVVEILAKFFPE  172 (178)
Q Consensus       157 ~s~~e~~~~i~~~~~~  172 (178)
                      +|+.|+++.+++.++.
T Consensus       271 ~s~~e~~~~i~~~~g~  286 (346)
T 4egb_A          271 KTNVEVVEQIITLLGK  286 (346)
T ss_dssp             EEHHHHHHHHHHHHTC
T ss_pred             eeHHHHHHHHHHHhCC
Confidence            9999999999998854

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.94  E-value=1.9e-26  Score=173.80  Aligned_cols=161  Identities=19%  Similarity=0.143  Sum_probs=130.8

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+.....+   ++|++      +..|.+.|+.+|..+|++++.++++.
T Consensus       124 ~~~nv~~~~~ll~a~~~~~~~~~v~~SS-~~vyg~~~~~~---~~E~~------~~~p~~~Y~~sK~~~E~~~~~~~~~~  193 (351)
T 3ruf_A          124 NATNITGFLNILHAAKNAQVQSFTYAAS-SSTYGDHPALP---KVEEN------IGNPLSPYAVTKYVNEIYAQVYARTY  193 (351)
T ss_dssp             HHHHTHHHHHHHHHHHHTTCSEEEEEEE-GGGGTTCCCSS---BCTTC------CCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEEec-HHhcCCCCCCC---CccCC------CCCCCChhHHHHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999 68887665544   88887      45788999999999999999999888


Q ss_pred             CCcEEEecCCceeCCCCCCCCh--hhHHH-HHHHHhCCccc---cCCCCcccccHHHHHHHHHHhhcCC--CCCCcEEE-
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVN--ASIIH-ILKYLNGSAKT---YANSVQAYVHVRDVALAHILVYETP--SASGRYLC-  152 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~--~~~~~-~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~~~-  152 (178)
                      |++++++||+++||++......  ..+.. +.....+....   .|++.++|+|++|+|++++.+++.+  ..++.||+ 
T Consensus       194 g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~  273 (351)
T 3ruf_A          194 GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVA  273 (351)
T ss_dssp             CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEES
T ss_pred             CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhccccCCCEEEeC
Confidence            9999999999999997654311  23333 33455565532   2567899999999999999999872  34558887 


Q ss_pred             ecCccCHHHHHHHHHHhCCC
Q 030406          153 AESVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       153 ~~~~~s~~e~~~~i~~~~~~  172 (178)
                      +++.+|++|+++.+++.++.
T Consensus       274 ~~~~~s~~e~~~~i~~~~g~  293 (351)
T 3ruf_A          274 VGDRTTLNELSGYIYDELNL  293 (351)
T ss_dssp             CSCCEEHHHHHHHHHHHHHT
T ss_pred             CCCcccHHHHHHHHHHHhCc
Confidence            67899999999999998754

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.94  E-value=3.7e-26  Score=169.66  Aligned_cols=158  Identities=24%  Similarity=0.239  Sum_probs=127.5

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+.....+   ++|+.      +..|.+.|+.+|..+|.+++.++.+.
T Consensus        86 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS-~~vyg~~~~~~---~~e~~------~~~p~~~Y~~sK~~~e~~~~~~~~~~  155 (312)
T 3ko8_A           86 FNENVVATFNVLEWARQTGVRTVVFASS-STVYGDADVIP---TPEEE------PYKPISVYGAAKAAGEVMCATYARLF  155 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEE-GGGGCSCSSSS---BCTTS------CCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEeCc-HHHhCCCCCCC---CCCCC------CCCCCChHHHHHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999 68888765544   88876      45788999999999999999999888


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCcc--cc--CCCCcccccHHHHHHHHHHhhcC---C-CCCCcEEE-
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK--TY--ANSVQAYVHVRDVALAHILVYET---P-SASGRYLC-  152 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~i~v~D~a~~~~~~~~~---~-~~~~~~~~-  152 (178)
                      |++++++||+++||+.....  .....+.+...+..+  ..  +++.++|+|++|+|++++.+++.   + ..++.||+ 
T Consensus       156 g~~~~~lrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~  233 (312)
T 3ko8_A          156 GVRCLAVRYANVVGPRLRHG--VIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVG  233 (312)
T ss_dssp             CCEEEEEEECEEECTTCCSS--HHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEES
T ss_pred             CCCEEEEeeccccCcCCCCC--hHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEc
Confidence            99999999999999975542  222334445555332  23  46789999999999999999987   3 34458887 


Q ss_pred             ecCccCHHHHHHHHHHhCC
Q 030406          153 AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       153 ~~~~~s~~e~~~~i~~~~~  171 (178)
                      +++.+|+.|+++.+++.++
T Consensus       234 ~~~~~s~~e~~~~i~~~~g  252 (312)
T 3ko8_A          234 NVDAVRVLDIAQIVAEVLG  252 (312)
T ss_dssp             CSSCEEHHHHHHHHHHHHT
T ss_pred             CCCceeHHHHHHHHHHHhC
Confidence            5688999999999999874

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.94  E-value=2.2e-25  Score=166.04  Aligned_cols=173  Identities=31%  Similarity=0.464  Sum_probs=129.1

Q ss_pred             chhHHHHHHHHHHHHHhC-CCCEEEEeccccccccCCCCCCCCccCCCCCCchhh--hcccCc-hHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEF--CKNTKN-WYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~--~~~~~~-~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.||.+++++|++. ++++|||+||.+++|+....  ..+++|++|.....  +..|.+ .|+.+|.++|.+++++
T Consensus        97 ~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~--~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~  174 (322)
T 2p4h_X           97 TKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKD--KDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEF  174 (322)
T ss_dssp             HHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSC--CSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCC--CeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHH
Confidence            578999999999999998 79999999996556654322  22478877554322  123333 6999999999999998


Q ss_pred             HHhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEEecCcc
Q 030406           78 AVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVL  157 (178)
Q Consensus        78 ~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~  157 (178)
                      ++++|++++++||+++||+............+...+.+.....+...++|+|++|+|++++.+++.+...+.||++++.+
T Consensus       175 ~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~g~~~~~~~~~  254 (322)
T 2p4h_X          175 GEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLENSVPGGRYNCSPFIV  254 (322)
T ss_dssp             HHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHHHHSCCCCEEEECCCEEE
T ss_pred             HHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHHhhCcCCCCCEEEcCCCC
Confidence            88889999999999999997543322223333344455543344333489999999999999998765556788878889


Q ss_pred             CHHHHHHHHHHhCCCCCCC
Q 030406          158 HRGEVVEILAKFFPEYPIP  176 (178)
Q Consensus       158 s~~e~~~~i~~~~~~~~~p  176 (178)
                      |++|+++.+++.++..++|
T Consensus       255 s~~e~~~~i~~~~~~~~~~  273 (322)
T 2p4h_X          255 PIEEMSQLLSAKYPEYQIL  273 (322)
T ss_dssp             EHHHHHHHHHHHCTTSCCC
T ss_pred             CHHHHHHHHHHhCCCCCCC
Confidence            9999999999988765555

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.94  E-value=2e-25  Score=166.07  Aligned_cols=155  Identities=18%  Similarity=0.184  Sum_probs=127.8

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      ++ |+.++.+++++|++.++++|||+|| .++|+.....+   ++|++      +..|.+.|+.+|..+|++++.++.++
T Consensus        93 ~~-n~~~~~~ll~a~~~~~v~~~v~~SS-~~v~~~~~~~~---~~E~~------~~~p~~~Y~~sK~~~E~~~~~~~~~~  161 (321)
T 3vps_A           93 LD-NVDSGRHLLALCTSVGVPKVVVGST-CEVYGQADTLP---TPEDS------PLSPRSPYAASKVGLEMVAGAHQRAS  161 (321)
T ss_dssp             HH-HHHHHHHHHHHHHHHTCCEEEEEEE-GGGGCSCSSSS---BCTTS------CCCCCSHHHHHHHHHHHHHHHHHHSS
T ss_pred             HH-HHHHHHHHHHHHHHcCCCeEEEecC-HHHhCCCCCCC---CCCCC------CCCCCChhHHHHHHHHHHHHHHHHHc
Confidence            45 9999999999999999999999999 68888765444   88886      45688999999999999999999889


Q ss_pred             CC-cEEEecCCceeCCCCCCCChhhHHHH-HHHHhCCcc-cc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecC
Q 030406           82 GV-DLVVVNPVLVLGPLLQSTVNASIIHI-LKYLNGSAK-TY--ANSVQAYVHVRDVALAHILVYETPSASGRYLC-AES  155 (178)
Q Consensus        82 ~~-~~~i~R~~~v~G~~~~~~~~~~~~~~-~~~~~~~~~-~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~  155 (178)
                      ++ +++++||+++||++....  ..+..+ .....+... ..  +++.++|+|++|+|++++.+++.+..+ .|++ +++
T Consensus       162 ~~~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~g-~~~i~~~~  238 (321)
T 3vps_A          162 VAPEVGIVRFFNVYGPGERPD--ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLPS-VVNFGSGQ  238 (321)
T ss_dssp             SSCEEEEEEECEEECTTCCTT--SHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCCS-EEEESCSC
T ss_pred             CCCceEEEEeccccCcCCCCC--ChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCCC-eEEecCCC
Confidence            99 999999999999986542  233333 344445442 22  567899999999999999999998775 8887 577


Q ss_pred             ccCHHHHHHHHHHhCC
Q 030406          156 VLHRGEVVEILAKFFP  171 (178)
Q Consensus       156 ~~s~~e~~~~i~~~~~  171 (178)
                      .+|+.|+++.++ .++
T Consensus       239 ~~s~~e~~~~i~-~~g  253 (321)
T 3vps_A          239 SLSVNDVIRILQ-ATS  253 (321)
T ss_dssp             CEEHHHHHHHHH-TTC
T ss_pred             cccHHHHHHHHH-HhC
Confidence            899999999999 774

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.93  E-value=1.6e-25  Score=166.01  Aligned_cols=165  Identities=21%  Similarity=0.209  Sum_probs=127.5

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCc-hHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKN-WYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.+|.+|+++|++.++++|||+|| .++|+.....+   ++|+++...  +..|.+ .|+.+|..+|++++.+.++
T Consensus        86 ~~~nv~gt~~ll~a~~~~~~~~~v~~SS-~~vyg~~~~~~---~~E~~~~~~--~~~p~~~~Y~~sK~~~E~~~~~~~~~  159 (319)
T 4b8w_A           86 WRKNVHMNDNVLHSAFEVGARKVVSCLS-TCIFPDKTTYP---IDETMIHNG--PPHNSNFGYSYAKRMIDVQNRAYFQQ  159 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCSEEEEECC-GGGSCSSCCSS---BCGGGGGBS--CCCSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCeEEEEcc-hhhcCCCCCCC---ccccccccC--CCCCCcchHHHHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999 68888665544   788753211  224445 5999999999999999988


Q ss_pred             cCCcEEEecCCceeCCCCCCCC--hhhHHHHH-H----HHhCCcc-c--cCCCCcccccHHHHHHHHHHhhcCCCC--CC
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTV--NASIIHIL-K----YLNGSAK-T--YANSVQAYVHVRDVALAHILVYETPSA--SG  148 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~--~~~~~~~~-~----~~~~~~~-~--~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~  148 (178)
                      .+++++++||+++||++.....  ...+..+. +    ...+... .  .+++.++|+|++|+|++++.+++.+..  ++
T Consensus       160 ~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~  239 (319)
T 4b8w_A          160 YGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPI  239 (319)
T ss_dssp             HCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCCSSCE
T ss_pred             hCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhccccCCce
Confidence            9999999999999999865321  12222222 2    3455543 2  256789999999999999999987543  33


Q ss_pred             cEEE-ecCccCHHHHHHHHHHhCCC
Q 030406          149 RYLC-AESVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       149 ~~~~-~~~~~s~~e~~~~i~~~~~~  172 (178)
                      .||+ +++++|+.|+++.+++.++.
T Consensus       240 ~~ni~~~~~~s~~e~~~~i~~~~g~  264 (319)
T 4b8w_A          240 ILSVGEEDEVSIKEAAEAVVEAMDF  264 (319)
T ss_dssp             EECCCGGGCEEHHHHHHHHHHHTTC
T ss_pred             EEEecCCCceeHHHHHHHHHHHhCC
Confidence            7876 57899999999999999853

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.93  E-value=5.9e-26  Score=170.32  Aligned_cols=175  Identities=38%  Similarity=0.586  Sum_probs=126.0

Q ss_pred             chhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhh--hcccCc-hHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEF--CKNTKN-WYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~--~~~~~~-~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.||.+++++|++.+ +++|||+||.+++|+.+......+++|++|.....  +..|.. .|+.+|..+|.+++.+
T Consensus       103 ~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~  182 (338)
T 2rh8_A          103 IKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKF  182 (338)
T ss_dssp             CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchHHHHHHHHHHHHHHH
Confidence            6789999999999999985 99999999965566432111112378876543211  112222 5999999999999998


Q ss_pred             HHhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccC--------CCCcccccHHHHHHHHHHhhcCCCCCCc
Q 030406           78 AVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYA--------NSVQAYVHVRDVALAHILVYETPSASGR  149 (178)
Q Consensus        78 ~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~i~v~D~a~~~~~~~~~~~~~~~  149 (178)
                      .+++|++++++||+++||+.........+..+...+.+....++        .+.++|+|++|+|++++.+++.+...+.
T Consensus       183 ~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~  262 (338)
T 2rh8_A          183 AEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKESASGR  262 (338)
T ss_dssp             HHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTTCCEE
T ss_pred             HHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHHHHHHHHHHHHcCCCcCCc
Confidence            87789999999999999997654322333333333444432221        2345899999999999999987666678


Q ss_pred             EEEecCccCHHHHHHHHHHhCCCCCCC
Q 030406          150 YLCAESVLHRGEVVEILAKFFPEYPIP  176 (178)
Q Consensus       150 ~~~~~~~~s~~e~~~~i~~~~~~~~~p  176 (178)
                      |+++++.+|++|+++.+++.++..++|
T Consensus       263 ~~~~~~~~s~~e~~~~l~~~~~~~~~~  289 (338)
T 2rh8_A          263 YICCAANTSVPELAKFLSKRYPQYKVP  289 (338)
T ss_dssp             EEECSEEECHHHHHHHHHHHCTTSCCC
T ss_pred             EEEecCCCCHHHHHHHHHHhCCCCCCC
Confidence            888777899999999999998755554

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.93  E-value=1.5e-25  Score=166.28  Aligned_cols=162  Identities=15%  Similarity=0.137  Sum_probs=127.9

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+....  ..+.+|+.      +..|.+.|+.+|..+|.+++.++.++
T Consensus        91 ~~~n~~~~~~l~~~~~~~~~~~~v~~SS-~~~~~~~~~--~~~~~e~~------~~~~~~~Y~~sK~~~e~~~~~~~~~~  161 (312)
T 2yy7_A           91 WDLNMNSLFHVLNLAKAKKIKKIFWPSS-IAVFGPTTP--KENTPQYT------IMEPSTVYGISKQAGERWCEYYHNIY  161 (312)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCSEEECCEE-GGGCCTTSC--SSSBCSSC------BCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEecc-HHHhCCCCC--CCCccccC------cCCCCchhHHHHHHHHHHHHHHHHhc
Confidence            5789999999999999999999999999 678865332  12266765      45678999999999999999988888


Q ss_pred             CCcEEEecCCceeCCCCCCCC---hhhHHHHHHHHhCCc-ccc--CCCCcccccHHHHHHHHHHhhcCCCC----CCcEE
Q 030406           82 GVDLVVVNPVLVLGPLLQSTV---NASIIHILKYLNGSA-KTY--ANSVQAYVHVRDVALAHILVYETPSA----SGRYL  151 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~---~~~~~~~~~~~~~~~-~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~----~~~~~  151 (178)
                      |++++++||+++||+...+..   ......+.+.+.+.. ..+  +++.++|+|++|+|++++.+++.+..    ++.||
T Consensus       162 ~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~n  241 (312)
T 2yy7_A          162 GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYN  241 (312)
T ss_dssp             CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEE
T ss_pred             CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccccccCceEE
Confidence            999999999999997643221   123344445444443 333  56789999999999999999988653    36899


Q ss_pred             EecCccCHHHHHHHHHHhCCC
Q 030406          152 CAESVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       152 ~~~~~~s~~e~~~~i~~~~~~  172 (178)
                      ++++.+|++|+++.+++.++.
T Consensus       242 i~~~~~s~~e~~~~i~~~~~~  262 (312)
T 2yy7_A          242 LAAMSFTPTEIANEIKKHIPE  262 (312)
T ss_dssp             CCSEEECHHHHHHHHHTTCTT
T ss_pred             eCCCccCHHHHHHHHHHHCCC
Confidence            877899999999999998874

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.93  E-value=6.1e-25  Score=164.24  Aligned_cols=160  Identities=21%  Similarity=0.218  Sum_probs=126.6

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+.....+   ++|++      +..|.+.|+.+|..+|.+++.++.+.
T Consensus        91 ~~~n~~~~~~l~~a~~~~~~~~~v~~Ss-~~~~~~~~~~~---~~E~~------~~~~~~~Y~~sK~~~e~~~~~~~~~~  160 (330)
T 2c20_A           91 YNNNVYGALCLLEVMDEFKVDKFIFSST-AATYGEVDVDL---ITEET------MTNPTNTYGETKLAIEKMLHWYSQAS  160 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCEEEEECC-GGGGCSCSSSS---BCTTS------CCCCSSHHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHhHHHHHHHHHHHHcCCCEEEEeCC-ceeeCCCCCCC---CCcCC------CCCCCChHHHHHHHHHHHHHHHHHHh
Confidence            5689999999999999999999999999 68887654444   88887      34678999999999999999998888


Q ss_pred             CCcEEEecCCceeCCCCCCC-------ChhhHHHHHHHHhCCc---cc--------cCCCCcccccHHHHHHHHHHhhcC
Q 030406           82 GVDLVVVNPVLVLGPLLQST-------VNASIIHILKYLNGSA---KT--------YANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~---~~--------~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      +++++++||+++||++..+.       ....+..+.+...+..   ..        .|++.++|+|++|+|++++.+++.
T Consensus       161 ~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~  240 (330)
T 2c20_A          161 NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKD  240 (330)
T ss_dssp             SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHH
T ss_pred             CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhc
Confidence            99999999999999863211       1234444555444332   11        245678999999999999999876


Q ss_pred             CC---CCCcEEE-ecCccCHHHHHHHHHHhCC
Q 030406          144 PS---ASGRYLC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       144 ~~---~~~~~~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                      +.   .++.||+ +++++|++|+++.+++.++
T Consensus       241 ~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g  272 (330)
T 2c20_A          241 LQNGGESDFYNLGNGNGFSVKEIVDAVREVTN  272 (330)
T ss_dssp             HHTTCCCEEEECCCTTCBCHHHHHHHHHHHTT
T ss_pred             cccCCCCCeEEeCCCCCccHHHHHHHHHHHhC
Confidence            42   2458987 5688999999999999885

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.93  E-value=3.6e-25  Score=164.34  Aligned_cols=159  Identities=25%  Similarity=0.260  Sum_probs=125.3

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccC-CCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMD-PNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~-~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.++.+++++|++.++++|||+||.+++|+. ....+   ++|++      +..|.+.|+.+|..+|.+++.++++
T Consensus        90 ~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~---~~E~~------~~~~~~~Y~~sK~~~e~~~~~~~~~  160 (311)
T 2p5y_A           90 FEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGER---AEETW------PPRPKSPYAASKAAFEHYLSVYGQS  160 (311)
T ss_dssp             HHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCC---BCTTS------CCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCC---cCCCC------CCCCCChHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999999999999995488875 33233   77776      4457789999999999999998888


Q ss_pred             cCCcEEEecCCceeCCCCCCCC-hhhHHHHH-HHHhCCcc--------ccCCCCcccccHHHHHHHHHHhhcCCCCCCcE
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTV-NASIIHIL-KYLNGSAK--------TYANSVQAYVHVRDVALAHILVYETPSASGRY  150 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~-~~~~~~~~-~~~~~~~~--------~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~  150 (178)
                      .|++++++||+++||+...... ...+..+. ....+...        ..+.+.++|+|++|+|++++.+++.+  ++.|
T Consensus       161 ~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~--~~~~  238 (311)
T 2p5y_A          161 YGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL--EGIY  238 (311)
T ss_dssp             HCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC--CEEE
T ss_pred             cCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC--CCEE
Confidence            8999999999999999754432 12233333 34445442        22456789999999999999999765  6688


Q ss_pred             EE-ecCccCHHHHHHHHHHhCC
Q 030406          151 LC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       151 ~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                      |+ +++++|++|+++.+++.++
T Consensus       239 ~i~~~~~~s~~e~~~~i~~~~g  260 (311)
T 2p5y_A          239 NVGTGEGHTTREVLMAVAEAAG  260 (311)
T ss_dssp             EESCSCCEEHHHHHHHHHHHHT
T ss_pred             EeCCCCCccHHHHHHHHHHHhC
Confidence            87 5678999999999999874

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.93  E-value=5.8e-25  Score=165.02  Aligned_cols=160  Identities=24%  Similarity=0.233  Sum_probs=127.9

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+.....+   ++|+.      +..|.+.|+.+|..+|.+++.++.+.
T Consensus       102 ~~~n~~~~~~l~~~~~~~~~~~iv~~SS-~~~~g~~~~~~---~~e~~------~~~~~~~Y~~sK~~~e~~~~~~~~~~  171 (341)
T 3enk_A          102 YRNNLDSLLSLLRVMRERAVKRIVFSSS-ATVYGVPERSP---IDETF------PLSATNPYGQTKLMAEQILRDVEAAD  171 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCEEEEEEE-GGGBCSCSSSS---BCTTS------CCBCSSHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEEec-ceEecCCCCCC---CCCCC------CCCCCChhHHHHHHHHHHHHHHhhcC
Confidence            5789999999999999999999999999 68887665544   88886      45688999999999999999988887


Q ss_pred             C-CcEEEecCCceeCCCCCCC--------ChhhHHHHHHHHhCCc-c--c--------cCCCCcccccHHHHHHHHHHhh
Q 030406           82 G-VDLVVVNPVLVLGPLLQST--------VNASIIHILKYLNGSA-K--T--------YANSVQAYVHVRDVALAHILVY  141 (178)
Q Consensus        82 ~-~~~~i~R~~~v~G~~~~~~--------~~~~~~~~~~~~~~~~-~--~--------~~~~~~~~i~v~D~a~~~~~~~  141 (178)
                      + ++++++||+++||++....        ....+..+.....+.. +  .        .|++.++|+|++|+|++++.++
T Consensus       172 ~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~  251 (341)
T 3enk_A          172 PSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAAL  251 (341)
T ss_dssp             TTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHH
T ss_pred             CCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHH
Confidence            6 9999999999999864210        1233445555555432 1  1        3467899999999999999999


Q ss_pred             cC---CCCCCcEEE-ecCccCHHHHHHHHHHhCC
Q 030406          142 ET---PSASGRYLC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       142 ~~---~~~~~~~~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                      +.   ...++.||+ +++++|++|+++.+++.++
T Consensus       252 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g  285 (341)
T 3enk_A          252 DALERRDASLTVNLGTGRGYSVLEVVRAFEKASG  285 (341)
T ss_dssp             HHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHC
T ss_pred             HhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhC
Confidence            86   234568987 6788999999999999874

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.93  E-value=5.6e-25  Score=165.00  Aligned_cols=173  Identities=38%  Similarity=0.701  Sum_probs=127.1

Q ss_pred             chhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhh--hc-ccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEF--CK-NTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~--~~-~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.||.+++++|++.+ +++|||+||.+++|+.....  ..++|++|.....  +. .+.+.|+.+|.++|.+++.+
T Consensus       100 ~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~--~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~  177 (337)
T 2c29_D          100 IKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQL--PVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKY  177 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCC--SEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCC--cccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHH
Confidence            5789999999999999877 89999999965577643221  2378887654322  11 24567999999999999998


Q ss_pred             HHhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccC-CCCcccccHHHHHHHHHHhhcCCCCCCcEEEecCc
Q 030406           78 AVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYA-NSVQAYVHVRDVALAHILVYETPSASGRYLCAESV  156 (178)
Q Consensus        78 ~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~  156 (178)
                      .+++|++++++||+++||+.........+......+.|....++ .....|+|++|+|++++.+++.+...+.|+++++.
T Consensus       178 ~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~  257 (337)
T 2c29_D          178 AKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFENPKAEGRYICSSHD  257 (337)
T ss_dssp             HHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHHHHHHCTTCCEEEEECCEE
T ss_pred             HHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHHHHHHhcCcccCceEEEeCCC
Confidence            87789999999999999997544322222222222344432221 12345999999999999999877666788887778


Q ss_pred             cCHHHHHHHHHHhCCCCCCC
Q 030406          157 LHRGEVVEILAKFFPEYPIP  176 (178)
Q Consensus       157 ~s~~e~~~~i~~~~~~~~~p  176 (178)
                      +|++|+++.+++.++..++|
T Consensus       258 ~s~~e~~~~i~~~~~~~~~~  277 (337)
T 2c29_D          258 CIILDLAKMLREKYPEYNIP  277 (337)
T ss_dssp             EEHHHHHHHHHHHCTTSCCC
T ss_pred             CCHHHHHHHHHHHCCCccCC
Confidence            99999999999998765554

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.93  E-value=7.1e-25  Score=164.38  Aligned_cols=159  Identities=24%  Similarity=0.247  Sum_probs=127.4

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+.....+   ++|++      +..|.+.|+.+|..+|.+++.+..+.
T Consensus       100 ~~~Nv~~~~~l~~a~~~~~~~~~v~~SS-~~vyg~~~~~~---~~E~~------~~~~~~~Y~~sK~~~e~~~~~~~~~~  169 (337)
T 1r6d_A          100 TETNVQGTQTLLQCAVDAGVGRVVHVST-NQVYGSIDSGS---WTESS------PLEPNSPYAASKAGSDLVARAYHRTY  169 (337)
T ss_dssp             HHHHTHHHHHHHHHHHHTTCCEEEEEEE-GGGGCCCSSSC---BCTTS------CCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEecc-hHHhCCCCCCC---CCCCC------CCCCCCchHHHHHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999 68887554333   78876      44678899999999999999998888


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHH-HHHHHhCCcc-c--cCCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecCc
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIH-ILKYLNGSAK-T--YANSVQAYVHVRDVALAHILVYETPSASGRYLC-AESV  156 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~-~~~~~~~~~~-~--~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~~  156 (178)
                      +++++++||+++||+.....  ..+.. +.....+... .  .+++.++|+|++|+|++++.+++.+..++.|++ ++++
T Consensus       170 g~~~~ilrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~  247 (337)
T 1r6d_A          170 GLDVRITRCCNNYGPYQHPE--KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLE  247 (337)
T ss_dssp             CCCEEEEEECEEECTTCCTT--SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCE
T ss_pred             CCCEEEEEeeeeECCCCCCC--ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCCCCCEEEeCCCCC
Confidence            99999999999999985432  22332 3344455442 2  245788999999999999999987655668987 5578


Q ss_pred             cCHHHHHHHHHHhCCC
Q 030406          157 LHRGEVVEILAKFFPE  172 (178)
Q Consensus       157 ~s~~e~~~~i~~~~~~  172 (178)
                      +|+.|+++.+++.++.
T Consensus       248 ~s~~e~~~~i~~~~g~  263 (337)
T 1r6d_A          248 LTNRELTGILLDSLGA  263 (337)
T ss_dssp             EEHHHHHHHHHHHHTC
T ss_pred             ccHHHHHHHHHHHhCC
Confidence            9999999999998753

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.93  E-value=3.2e-25  Score=166.91  Aligned_cols=160  Identities=24%  Similarity=0.291  Sum_probs=127.3

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCC--CCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDP--NRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~--~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+..  ...+   ++|++      +..|.+.|+.+|..+|++++.+.+
T Consensus        99 ~~~nv~~~~~ll~a~~~~~~~~~V~~SS-~~vyg~~~~~~~~---~~E~~------~~~~~~~Y~~sK~~~E~~~~~~~~  168 (347)
T 4id9_A           99 FAVNVEGTRRLLDAASAAGVRRFVFASS-GEVYPENRPEFLP---VTEDH------PLCPNSPYGLTKLLGEELVRFHQR  168 (347)
T ss_dssp             HHHHTHHHHHHHHHHHHTTCSEEEEEEE-GGGTTTTSCSSSS---BCTTS------CCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCeEEEECC-HHHhCCCCCCCCC---cCCCC------CCCCCChHHHHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999 6888762  3333   88886      457889999999999999999999


Q ss_pred             hcCCcEEEecCCcee-------------CCCCCCC---------ChhhHHHHH-HHHhCCcc-c--cCCCCccc----cc
Q 030406           80 ARGVDLVVVNPVLVL-------------GPLLQST---------VNASIIHIL-KYLNGSAK-T--YANSVQAY----VH  129 (178)
Q Consensus        80 ~~~~~~~i~R~~~v~-------------G~~~~~~---------~~~~~~~~~-~~~~~~~~-~--~~~~~~~~----i~  129 (178)
                      +++++++++||+++|             |++....         ....+..+. ....+... .  .+++.++|    +|
T Consensus       169 ~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~  248 (347)
T 4id9_A          169 SGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHITD  248 (347)
T ss_dssp             HSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECEEE
T ss_pred             hcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCcEe
Confidence            999999999999999             7653321         012333333 33444432 2  25678899    99


Q ss_pred             HHHHHHHHHHhhcCC-CCCCcEEE-ecCccCHHHHHHHHHHhCC
Q 030406          130 VRDVALAHILVYETP-SASGRYLC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       130 v~D~a~~~~~~~~~~-~~~~~~~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                      ++|+|++++.+++.+ ..++.||+ +++.+|+.|+++.+++.++
T Consensus       249 v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g  292 (347)
T 4id9_A          249 TRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTG  292 (347)
T ss_dssp             HHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhC
Confidence            999999999999987 44568987 5788999999999999874

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.93  E-value=7.4e-25  Score=165.28  Aligned_cols=159  Identities=17%  Similarity=0.144  Sum_probs=126.4

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+.....+   ++|++      +..|.+.|+.+|..+|.+++.++.+.
T Consensus       126 ~~~n~~~~~~l~~a~~~~~~~~~v~~SS-~~~~~~~~~~~---~~E~~------~~~~~~~Y~~sK~~~e~~~~~~~~~~  195 (352)
T 1sb8_A          126 NATNIDGFLNMLIAARDAKVQSFTYAAS-SSTYGDHPGLP---KVEDT------IGKPLSPYAVTKYVNELYADVFSRCY  195 (352)
T ss_dssp             HHHHTHHHHHHHHHHHHTTCSEEEEEEE-GGGGTTCCCSS---BCTTC------CCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEecc-HHhcCCCCCCC---CCCCC------CCCCCChhHHHHHHHHHHHHHHHHHc
Confidence            5689999999999999999999999999 57887554434   78886      34678899999999999999988888


Q ss_pred             CCcEEEecCCceeCCCCCCC--ChhhHH-HHHHHHhCCccc-c--CCCCcccccHHHHHHHHHHhhcCC--CCCCcEEE-
Q 030406           82 GVDLVVVNPVLVLGPLLQST--VNASII-HILKYLNGSAKT-Y--ANSVQAYVHVRDVALAHILVYETP--SASGRYLC-  152 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~--~~~~~~-~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~~~-  152 (178)
                      +++++++||+++||+.....  ....+. .+.....+.... .  +++.++|+|++|+|++++.++...  ..++.|++ 
T Consensus       196 g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~  275 (352)
T 1sb8_A          196 GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIA  275 (352)
T ss_dssp             CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEES
T ss_pred             CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccccCCCceEEeC
Confidence            99999999999999875432  112233 233445555432 2  467889999999999999988763  24558887 


Q ss_pred             ecCccCHHHHHHHHHHhC
Q 030406          153 AESVLHRGEVVEILAKFF  170 (178)
Q Consensus       153 ~~~~~s~~e~~~~i~~~~  170 (178)
                      +++++|++|+++.+++.+
T Consensus       276 ~~~~~s~~e~~~~i~~~~  293 (352)
T 1sb8_A          276 VGGRTSLNQLFFALRDGL  293 (352)
T ss_dssp             CSCCEEHHHHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHHH
Confidence            567899999999999988

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.93  E-value=1.4e-24  Score=162.66  Aligned_cols=160  Identities=11%  Similarity=0.034  Sum_probs=127.8

Q ss_pred             chhHHHHHHHHHHHHHhCCC-CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.++.+++++|++.++ ++|||+|| .++|+.....+   ++|++      +..|.+.|+.+|..+|.+++.++.+
T Consensus       110 ~~~n~~~~~~l~~a~~~~~~~~~~v~~SS-~~v~g~~~~~~---~~E~~------~~~p~~~Y~~sK~~~e~~~~~~~~~  179 (335)
T 1rpn_A          110 GVVDGLGVTHLLEAIRQFSPETRFYQAST-SEMFGLIQAER---QDENT------PFYPRSPYGVAKLYGHWITVNYRES  179 (335)
T ss_dssp             HHHHTHHHHHHHHHHHHHCTTSEEEEEEE-GGGGCSCSSSS---BCTTS------CCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEeC-HHHhCCCCCCC---CCccc------CCCCCChhHHHHHHHHHHHHHHHHH
Confidence            57899999999999999886 89999999 68887654434   78886      4467889999999999999999888


Q ss_pred             cCCcEEEecCCceeCCCCCCCCh-hhHH-HHHHHHhCCcc--cc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-e
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTVN-ASII-HILKYLNGSAK--TY--ANSVQAYVHVRDVALAHILVYETPSASGRYLC-A  153 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~~-~~~~-~~~~~~~~~~~--~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~  153 (178)
                      ++++++++||+++||++...... ..+. .+.....+..+  .+  +++.++|+|++|+|++++.+++.+. .+.||+ +
T Consensus       180 ~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~ni~~  258 (335)
T 1rpn_A          180 FGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK-ADDYVVAT  258 (335)
T ss_dssp             HCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS-CCCEEECC
T ss_pred             cCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC-CCEEEEeC
Confidence            89999999999999997544221 1222 23344555532  22  4678999999999999999998765 478886 5


Q ss_pred             cCccCHHHHHHHHHHhCCC
Q 030406          154 ESVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       154 ~~~~s~~e~~~~i~~~~~~  172 (178)
                      ++++|++|+++.+++.++.
T Consensus       259 ~~~~s~~e~~~~i~~~~g~  277 (335)
T 1rpn_A          259 GVTTTVRDMCQIAFEHVGL  277 (335)
T ss_dssp             SCEEEHHHHHHHHHHTTTC
T ss_pred             CCCccHHHHHHHHHHHhCC
Confidence            6789999999999998854

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.92  E-value=7.2e-25  Score=162.42  Aligned_cols=159  Identities=16%  Similarity=0.195  Sum_probs=118.2

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++ +|||+|| .++|+.....+   ++|++      +..|.+.|+.+|..+|.+++.+..+.
T Consensus        90 ~~~n~~~~~~l~~a~~~~~~-~~v~~SS-~~v~g~~~~~~---~~E~~------~~~p~~~Y~~sK~~~e~~~~~~~~~~  158 (310)
T 1eq2_A           90 MDNNYQYSKELLHYCLEREI-PFLYASS-AATYGGRTSDF---IESRE------YEKPLNVYGYSKFLFDEYVRQILPEA  158 (310)
T ss_dssp             HHHTHHHHHHHHHHHHHHTC-CEEEEEE-GGGGTTCCSCB---CSSGG------GCCCSSHHHHHHHHHHHHHHHHGGGC
T ss_pred             HHHHHHHHHHHHHHHHHcCC-eEEEEee-HHHhCCCCCCC---CCCCC------CCCCCChhHHHHHHHHHHHHHHHHHc
Confidence            57899999999999999888 9999999 57887554333   77775      55788999999999999999998888


Q ss_pred             CCcEEEecCCceeCCCCCCCC--hhhHHHHH-HHHhCCcc-cc--CCC-CcccccHHHHHHHHHHhhcCCCCCCcEEE-e
Q 030406           82 GVDLVVVNPVLVLGPLLQSTV--NASIIHIL-KYLNGSAK-TY--ANS-VQAYVHVRDVALAHILVYETPSASGRYLC-A  153 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~--~~~~~~~~-~~~~~~~~-~~--~~~-~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~  153 (178)
                      |++++++||+++||++.....  ...+..+. ....+... ..  +++ .++|+|++|+|++++.+++.+. ++.|++ +
T Consensus       159 g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~~  237 (310)
T 1eq2_A          159 NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-SGIFNLGT  237 (310)
T ss_dssp             SSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC-CEEEEESC
T ss_pred             CCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC-CCeEEEeC
Confidence            999999999999999754211  12333333 33444432 23  457 8899999999999999998876 668987 5


Q ss_pred             cCccCHHHHHHHHHHhCCC
Q 030406          154 ESVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       154 ~~~~s~~e~~~~i~~~~~~  172 (178)
                      ++++|++|+++.+++.++.
T Consensus       238 ~~~~s~~e~~~~i~~~~g~  256 (310)
T 1eq2_A          238 GRAESFQAVADATLAYHKK  256 (310)
T ss_dssp             SCCBCHHHHHHHC------
T ss_pred             CCccCHHHHHHHHHHHcCC
Confidence            6789999999999988754

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.92  E-value=7e-25  Score=166.51  Aligned_cols=164  Identities=15%  Similarity=0.217  Sum_probs=128.0

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhh-cccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFC-KNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~-~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.++.+++++|++.+ ++|||+|| .++|+.....+   ++|+++.....+ ..|.+.|+.+|..+|++++.+..+
T Consensus       115 ~~~nv~~~~~ll~a~~~~~-~~~v~~SS-~~vyg~~~~~~---~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~  189 (372)
T 3slg_A          115 FELDFEANLPIVRSAVKYG-KHLVFPST-SEVYGMCADEQ---FDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME  189 (372)
T ss_dssp             HHHHTTTTHHHHHHHHHHT-CEEEEECC-GGGGBSCCCSS---BCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHhC-CcEEEeCc-HHHhCCCCCCC---CCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC
Confidence            4789999999999999988 99999999 78998765544   777764321111 257779999999999999999877


Q ss_pred             cCCcEEEecCCceeCCCCCCC------ChhhHHH-HHHHHhCCccc-c--CCCCcccccHHHHHHHHHHhhcCCC---CC
Q 030406           81 RGVDLVVVNPVLVLGPLLQST------VNASIIH-ILKYLNGSAKT-Y--ANSVQAYVHVRDVALAHILVYETPS---AS  147 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~------~~~~~~~-~~~~~~~~~~~-~--~~~~~~~i~v~D~a~~~~~~~~~~~---~~  147 (178)
                       |++++++||+++||++....      ....+.. +.....+.... .  +++.++|+|++|+|++++.+++.+.   .+
T Consensus       190 -g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~  268 (372)
T 3slg_A          190 -GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATG  268 (372)
T ss_dssp             -TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTT
T ss_pred             -CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCC
Confidence             99999999999999986431      1123333 34455565532 2  5788999999999999999999874   45


Q ss_pred             CcEEEec--CccCHHHHHHHHHHhCC
Q 030406          148 GRYLCAE--SVLHRGEVVEILAKFFP  171 (178)
Q Consensus       148 ~~~~~~~--~~~s~~e~~~~i~~~~~  171 (178)
                      +.||+++  +.+|+.|+++.+++.++
T Consensus       269 ~~~ni~~~~~~~s~~e~~~~i~~~~g  294 (372)
T 3slg_A          269 KIYNIGNPNNNFSVRELANKMLELAA  294 (372)
T ss_dssp             EEEEECCTTCEEEHHHHHHHHHHHHH
T ss_pred             ceEEeCCCCCCccHHHHHHHHHHHhC
Confidence            6898754  59999999999998774

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.92  E-value=2.9e-24  Score=159.78  Aligned_cols=163  Identities=17%  Similarity=0.183  Sum_probs=126.8

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+....  ..+.+|++      +..|.+.|+.+|..+|.+++.+.+++
T Consensus        85 ~~~n~~~~~~l~~a~~~~~~~~~v~~SS-~~~~~~~~~--~~~~~e~~------~~~p~~~Y~~sK~~~e~~~~~~~~~~  155 (317)
T 3ajr_A           85 YKVNMNGTYNILEAAKQHRVEKVVIPST-IGVFGPETP--KNKVPSIT------ITRPRTMFGVTKIAAELLGQYYYEKF  155 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCEEEEEEE-GGGCCTTSC--SSSBCSSS------CCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhHHHHHHHHHHHHcCCCEEEEecC-HHHhCCCCC--CCCccccc------cCCCCchHHHHHHHHHHHHHHHHHhc
Confidence            5789999999999999999999999999 577765322  12256664      44688999999999999999988888


Q ss_pred             CCcEEEecCCceeCCCCCCC---ChhhHHHHHHHHhCCc-ccc--CCCCcccccHHHHHHHHHHhhcCCCC----CCcEE
Q 030406           82 GVDLVVVNPVLVLGPLLQST---VNASIIHILKYLNGSA-KTY--ANSVQAYVHVRDVALAHILVYETPSA----SGRYL  151 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~---~~~~~~~~~~~~~~~~-~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~----~~~~~  151 (178)
                      |++++++||+++||+...+.   .......+.+.+.+.. ...  +++.++|+|++|+|++++.+++.+..    ++.||
T Consensus       156 ~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~  235 (317)
T 3ajr_A          156 GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVLRNGYN  235 (317)
T ss_dssp             CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEE
T ss_pred             CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCccccccCceEe
Confidence            99999999999999763221   1123334444444443 222  46789999999999999999987642    36899


Q ss_pred             EecCccCHHHHHHHHHHhCCCC
Q 030406          152 CAESVLHRGEVVEILAKFFPEY  173 (178)
Q Consensus       152 ~~~~~~s~~e~~~~i~~~~~~~  173 (178)
                      ++++.+|++|+++.+++.++..
T Consensus       236 i~~~~~s~~e~~~~i~~~~~~~  257 (317)
T 3ajr_A          236 VTAYTFTPSELYSKIKERIPEF  257 (317)
T ss_dssp             CCSEEECHHHHHHHHHTTCCSC
T ss_pred             cCCccccHHHHHHHHHHHCCcc
Confidence            8777899999999999988743

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.92  E-value=3.1e-24  Score=164.48  Aligned_cols=163  Identities=18%  Similarity=0.224  Sum_probs=124.7

Q ss_pred             chhHHHHHHHHHHHHHhCCC-CEEEEeccccccccCCCCCCCCccCCCCCCchh--------hhcccCchHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLE--------FCKNTKNWYCYGKAVAEK   72 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~--------~~~~~~~~Y~~sK~~~E~   72 (178)
                      +++|+.|+.+++++|++.++ ++|||+|| .++|+... .+   ++|+.|.+..        .+..|.+.|+.+|..+|.
T Consensus       127 ~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS-~~vyg~~~-~~---~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~  201 (404)
T 1i24_A          127 QHNNVIGTLNVLFAIKEFGEECHLVKLGT-MGEYGTPN-ID---IEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSH  201 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEEEEECC-GGGGCCCS-SC---BCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcEEEEeCc-HHHhCCCC-CC---CCccccccccccccccccCCCCCCChhHHHHHHHHH
Confidence            46899999999999999887 69999999 68887543 22   6665332110        134577899999999999


Q ss_pred             HHHHHHHhcCCcEEEecCCceeCCCCCCCC---------------hhhHH-HHHHHHhCCcc-cc--CCCCcccccHHHH
Q 030406           73 AAWEEAVARGVDLVVVNPVLVLGPLLQSTV---------------NASII-HILKYLNGSAK-TY--ANSVQAYVHVRDV  133 (178)
Q Consensus        73 ~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~---------------~~~~~-~~~~~~~~~~~-~~--~~~~~~~i~v~D~  133 (178)
                      +++.++.++|++++++||++|||++.....               ...+. .+.....+... .+  |++.++|+|++|+
T Consensus       202 ~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dv  281 (404)
T 1i24_A          202 NIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDT  281 (404)
T ss_dssp             HHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred             HHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHH
Confidence            999988888999999999999999753210               11233 34455556553 33  4578999999999


Q ss_pred             HHHHHHhhcCCCC-C--CcEEEecCccCHHHHHHHHHHh
Q 030406          134 ALAHILVYETPSA-S--GRYLCAESVLHRGEVVEILAKF  169 (178)
Q Consensus       134 a~~~~~~~~~~~~-~--~~~~~~~~~~s~~e~~~~i~~~  169 (178)
                      |++++.+++.+.. +  +.||++++++|++|+++.+++.
T Consensus       282 a~a~~~~l~~~~~~g~~~~yni~~~~~s~~e~~~~i~~~  320 (404)
T 1i24_A          282 VQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKA  320 (404)
T ss_dssp             HHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHhCcccCCCceEEEECCCCCcHHHHHHHHHHH
Confidence            9999999988754 3  4888866889999999999987

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.92  E-value=1.7e-24  Score=165.63  Aligned_cols=163  Identities=23%  Similarity=0.266  Sum_probs=124.5

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCC----CCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRS----PDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~----~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+.....    ...+++|++      +..|.+.|+.+|..+|.+++.+
T Consensus       117 ~~~Nv~g~~~ll~a~~~~~~~~iv~~SS-~~v~g~~~~~~~~~~~~~~~E~~------~~~p~~~Y~~sK~~~e~~~~~~  189 (397)
T 1gy8_A          117 YDNNVVGILRLLQAMLLHKCDKIIFSSS-AAIFGNPTMGSVSTNAEPIDINA------KKSPESPYGESKLIAERMIRDC  189 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCEEEEEEE-GGGTBSCCC-----CCCCBCTTS------CCBCSSHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHhCCCEEEEECC-HHHhCCCCcccccccccCcCccC------CCCCCCchHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999 6888755410    012378876      4467889999999999999999


Q ss_pred             HHhcCCcEEEecCCceeCCCCCCC-------ChhhHHHHH-----HHHhCCc-------------cc--------cCCCC
Q 030406           78 AVARGVDLVVVNPVLVLGPLLQST-------VNASIIHIL-----KYLNGSA-------------KT--------YANSV  124 (178)
Q Consensus        78 ~~~~~~~~~i~R~~~v~G~~~~~~-------~~~~~~~~~-----~~~~~~~-------------~~--------~~~~~  124 (178)
                      +.+++++++++||+++||++....       ....+..+.     +...+..             ..        .|++.
T Consensus       190 ~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~  269 (397)
T 1gy8_A          190 AEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCV  269 (397)
T ss_dssp             HHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCE
T ss_pred             HHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCee
Confidence            888899999999999999964211       122344444     4444432             11        24567


Q ss_pred             cccccHHHHHHHHHHhhcCCC-C-----C---CcEEE-ecCccCHHHHHHHHHHhCC
Q 030406          125 QAYVHVRDVALAHILVYETPS-A-----S---GRYLC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       125 ~~~i~v~D~a~~~~~~~~~~~-~-----~---~~~~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                      ++|||++|+|++++.+++.+. .     +   +.||+ +++++|++|+++.+++.++
T Consensus       270 ~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g  326 (397)
T 1gy8_A          270 RDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTG  326 (397)
T ss_dssp             ECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHC
T ss_pred             EeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHHHHHHHHhC
Confidence            899999999999999987642 2     2   68887 5678999999999999874

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.92  E-value=4e-24  Score=160.15  Aligned_cols=159  Identities=20%  Similarity=0.184  Sum_probs=124.8

Q ss_pred             chhHHHHHHHHHHHHHhCCC-CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.++.+++++|++.+. ++|||+|| .++|+.....+   ++|++      +..+.+.|+.+|..+|.+++.++.+
T Consensus        99 ~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS-~~vyg~~~~~~---~~E~~------~~~~~~~Y~~sK~~~e~~~~~~~~~  168 (336)
T 2hun_A           99 LHSNVIGTYTLLESIRRENPEVRFVHVST-DEVYGDILKGS---FTEND------RLMPSSPYSATKAASDMLVLGWTRT  168 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTSEEEEEEE-GGGGCCCSSSC---BCTTB------CCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcEEEEecc-HHHHCCCCCCC---cCCCC------CCCCCCccHHHHHHHHHHHHHHHHH
Confidence            57899999999999998764 79999999 57887654333   78876      4467889999999999999999888


Q ss_pred             cCCcEEEecCCceeCCCCCCCChhhHHH-HHHHHhCCc-ccc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecC
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTVNASIIH-ILKYLNGSA-KTY--ANSVQAYVHVRDVALAHILVYETPSASGRYLC-AES  155 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~~~~~~~-~~~~~~~~~-~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~  155 (178)
                      .+++++++||+++||+.....  ..+.. +.....+.. +.+  +++.++|+|++|+|++++.+++.+..++.|++ +++
T Consensus       169 ~~~~~~ilrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~g~~~~v~~~~  246 (336)
T 2hun_A          169 YNLNASITRCTNNYGPYQFPE--KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGESREIYNISAGE  246 (336)
T ss_dssp             TTCEEEEEEECEEESTTCCTT--SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCCTTCEEEECCSC
T ss_pred             hCCCEEEEeeeeeeCcCCCcC--chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCCCCCEEEeCCCC
Confidence            899999999999999985432  22332 334445544 222  45789999999999999999987655668987 456


Q ss_pred             ccCHHHHHHHHHHhCCC
Q 030406          156 VLHRGEVVEILAKFFPE  172 (178)
Q Consensus       156 ~~s~~e~~~~i~~~~~~  172 (178)
                      ++|++|+++.+++.++.
T Consensus       247 ~~s~~e~~~~i~~~~g~  263 (336)
T 2hun_A          247 EKTNLEVVKIILRLMGK  263 (336)
T ss_dssp             EECHHHHHHHHHHHTTC
T ss_pred             cccHHHHHHHHHHHhCC
Confidence            89999999999998854

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.92  E-value=2.7e-24  Score=160.16  Aligned_cols=159  Identities=19%  Similarity=0.176  Sum_probs=125.5

Q ss_pred             chhHHHHHHHHHHHHHhC-CCCEEEEeccccccccCC--CCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAVYMDP--NRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-~~~~~i~~Ss~~~~~~~~--~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.+++++|++. ++++|||+|| .++|+..  ...+   ++|++      +..|.+.|+.+|..+|.+++.++
T Consensus        98 ~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS-~~v~g~~~~~~~~---~~E~~------~~~~~~~Y~~sK~~~E~~~~~~~  167 (321)
T 2pk3_A           98 FSTNVFGTLHVLDAVRDSNLDCRILTIGS-SEEYGMILPEESP---VSEEN------QLRPMSPYGVSKASVGMLARQYV  167 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCEEEEEEE-GGGTBSCCGGGCS---BCTTS------CCBCCSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEcc-HHhcCCCCCCCCC---CCCCC------CCCCCCccHHHHHHHHHHHHHHH
Confidence            578999999999999875 6899999999 5788754  3333   78886      44678899999999999999988


Q ss_pred             HhcCCcEEEecCCceeCCCCCCCChhhHHHHH-HHHh---C--Cc-ccc--CCCCcccccHHHHHHHHHHhhcCCCCCCc
Q 030406           79 VARGVDLVVVNPVLVLGPLLQSTVNASIIHIL-KYLN---G--SA-KTY--ANSVQAYVHVRDVALAHILVYETPSASGR  149 (178)
Q Consensus        79 ~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~-~~~~---~--~~-~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~  149 (178)
                      .++|++++++||+++||+.....  ..+..+. ....   |  .. ...  +++.++|+|++|+|++++.+++.+..++.
T Consensus       168 ~~~gi~~~ilrp~~v~g~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~g~~  245 (321)
T 2pk3_A          168 KAYGMDIIHTRTFNHIGPGQSLG--FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGKTGDV  245 (321)
T ss_dssp             HHHCCEEEEEEECEEECTTCCTT--SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHCCTTCE
T ss_pred             HHcCCCEEEEEeCcccCcCCCCC--chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCCCCCCe
Confidence            88899999999999999986542  1222222 2233   4  22 223  45688999999999999999987755668


Q ss_pred             EEE-ecCccCHHHHHHHHHHhCCC
Q 030406          150 YLC-AESVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       150 ~~~-~~~~~s~~e~~~~i~~~~~~  172 (178)
                      |++ +++.+|++|+++.+++.++.
T Consensus       246 ~~i~~~~~~s~~e~~~~i~~~~g~  269 (321)
T 2pk3_A          246 YNVCSGIGTRIQDVLDLLLAMANV  269 (321)
T ss_dssp             EEESCSCEEEHHHHHHHHHHHSSS
T ss_pred             EEeCCCCCeeHHHHHHHHHHHhCC
Confidence            987 56789999999999998853

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.92  E-value=4.5e-24  Score=160.26  Aligned_cols=165  Identities=18%  Similarity=0.237  Sum_probs=126.1

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhh-cccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFC-KNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~-~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.++.+++++|++.+ ++|||+|| .++|+.....+   ++|+++.....+ ..|.+.|+.+|..+|++++.++++
T Consensus        91 ~~~n~~~~~~l~~~~~~~~-~~~v~~SS-~~v~g~~~~~~---~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  165 (345)
T 2bll_A           91 FELDFEENLRIIRYCVKYR-KRIIFPST-SEVYGMCSDKY---FDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK  165 (345)
T ss_dssp             HHHHTHHHHHHHHHHHHTT-CEEEEECC-GGGGBTCCCSS---BCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhC-CeEEEEec-HHHcCCCCCCC---cCCcccccccCcccCcccccHHHHHHHHHHHHHHHHh
Confidence            5689999999999999988 99999999 68887654433   788764321111 146679999999999999999888


Q ss_pred             cCCcEEEecCCceeCCCCCCC------ChhhHH-HHHHHHhCCcc-cc--CCCCcccccHHHHHHHHHHhhcCCC---CC
Q 030406           81 RGVDLVVVNPVLVLGPLLQST------VNASII-HILKYLNGSAK-TY--ANSVQAYVHVRDVALAHILVYETPS---AS  147 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~------~~~~~~-~~~~~~~~~~~-~~--~~~~~~~i~v~D~a~~~~~~~~~~~---~~  147 (178)
                      .|++++++||+++||++....      ....+. .+.....+... ..  +++.++|+|++|+|++++.+++.+.   .+
T Consensus       166 ~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g  245 (345)
T 2bll_A          166 EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDG  245 (345)
T ss_dssp             HCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTT
T ss_pred             cCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccccCCC
Confidence            899999999999999975421      112222 33445556553 22  5678999999999999999998763   34


Q ss_pred             CcEEEec-C-ccCHHHHHHHHHHhCC
Q 030406          148 GRYLCAE-S-VLHRGEVVEILAKFFP  171 (178)
Q Consensus       148 ~~~~~~~-~-~~s~~e~~~~i~~~~~  171 (178)
                      +.|++++ + ++|++|+++.+++.++
T Consensus       246 ~~~~i~~~~~~~s~~e~~~~i~~~~g  271 (345)
T 2bll_A          246 EIINIGNPENEASIEELGEMLLASFE  271 (345)
T ss_dssp             EEEEECCTTSEEEHHHHHHHHHHHHH
T ss_pred             ceEEeCCCCCCCCHHHHHHHHHHHhC
Confidence            5888755 4 7999999999998764

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.92  E-value=3.5e-24  Score=157.32  Aligned_cols=151  Identities=17%  Similarity=0.142  Sum_probs=122.9

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++ ||||+|| .++|+.....+   ++|++      +..|.+.|+.+|..+|++++.+.   
T Consensus        80 ~~~n~~~~~~l~~~~~~~~~-~~v~~SS-~~vy~~~~~~~---~~E~~------~~~p~~~Y~~sK~~~E~~~~~~~---  145 (287)
T 3sc6_A           80 YVINAIGARNVAVASQLVGA-KLVYIST-DYVFQGDRPEG---YDEFH------NPAPINIYGASKYAGEQFVKELH---  145 (287)
T ss_dssp             HHHHTHHHHHHHHHHHHHTC-EEEEEEE-GGGSCCCCSSC---BCTTS------CCCCCSHHHHHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHHHHHHHHcCC-eEEEEch-hhhcCCCCCCC---CCCCC------CCCCCCHHHHHHHHHHHHHHHhC---
Confidence            57899999999999999887 7999999 68887665444   88887      45788999999999999998764   


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHh-CCc-cccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecCccC
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLN-GSA-KTYANSVQAYVHVRDVALAHILVYETPSASGRYLC-AESVLH  158 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~~~s  158 (178)
                       .+++++||+++||+....    .+..+..... +.. ...+++.++|+|++|+|++++.+++.+. ++.||+ +++.+|
T Consensus       146 -~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s  219 (287)
T 3sc6_A          146 -NKYFIVRTSWLYGKYGNN----FVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSL-YGTYHVSNTGSCS  219 (287)
T ss_dssp             -SSEEEEEECSEECSSSCC----HHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCC-CEEEECCCBSCEE
T ss_pred             -CCcEEEeeeeecCCCCCc----HHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCC-CCeEEEcCCCccc
Confidence             378999999999987433    3444444443 443 3347788999999999999999999887 679986 567899


Q ss_pred             HHHHHHHHHHhCCC
Q 030406          159 RGEVVEILAKFFPE  172 (178)
Q Consensus       159 ~~e~~~~i~~~~~~  172 (178)
                      ++|+++.+++.++.
T Consensus       220 ~~e~~~~i~~~~g~  233 (287)
T 3sc6_A          220 WFEFAKKIFSYANM  233 (287)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHcCC
Confidence            99999999998853

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.92  E-value=1.2e-24  Score=159.79  Aligned_cols=147  Identities=18%  Similarity=0.119  Sum_probs=118.3

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+.....+   ++|++      +..|.+.|+.+|..+|++ +.+    
T Consensus        82 ~~~n~~~~~~ll~a~~~~~~~~~v~~SS-~~vyg~~~~~~---~~E~~------~~~p~~~Y~~sK~~~E~~-~~~----  146 (286)
T 3gpi_A           82 RLSYVEGLRNTLSALEGAPLQHVFFVSS-TGVYGQEVEEW---LDEDT------PPIAKDFSGKRMLEAEAL-LAA----  146 (286)
T ss_dssp             -CCSHHHHHHHHHHTTTSCCCEEEEEEE-GGGCCCCCSSE---ECTTS------CCCCCSHHHHHHHHHHHH-GGG----
T ss_pred             HHHHHHHHHHHHHHHhhCCCCEEEEEcc-cEEEcCCCCCC---CCCCC------CCCCCChhhHHHHHHHHH-Hhc----
Confidence            5689999999999999999999999999 68888665444   78887      557889999999999999 543    


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCc-cccCCCCcccccHHHHHHHHHHhhcC---CCCCCcEEEe-cCc
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA-KTYANSVQAYVHVRDVALAHILVYET---PSASGRYLCA-ESV  156 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~D~a~~~~~~~~~---~~~~~~~~~~-~~~  156 (178)
                       ++++++||+++||+....        +...+.... ...+++.++|+|++|+|++++.+++.   ...++.|+++ +++
T Consensus       147 -~~~~ilR~~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (286)
T 3gpi_A          147 -YSSTILRFSGIYGPGRLR--------MIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQP  217 (286)
T ss_dssp             -SSEEEEEECEEEBTTBCH--------HHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCC
T ss_pred             -CCeEEEecccccCCCchh--------HHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCC
Confidence             899999999999987431        222222211 23356789999999999999999988   4556789875 678


Q ss_pred             cCHHHHHHHHHHhCCC
Q 030406          157 LHRGEVVEILAKFFPE  172 (178)
Q Consensus       157 ~s~~e~~~~i~~~~~~  172 (178)
                      +|+.|+++.+++.++.
T Consensus       218 ~s~~e~~~~i~~~~g~  233 (286)
T 3gpi_A          218 LPVHDLLRWLADRQGI  233 (286)
T ss_dssp             EEHHHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHHHcCC
Confidence            9999999999999853

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.92  E-value=1.9e-24  Score=163.66  Aligned_cols=155  Identities=17%  Similarity=0.223  Sum_probs=125.7

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.+++ |||+|| .++|+.... +   ++|++      +..|.+.|+.+|..+|.+++.++.+ 
T Consensus       112 ~~~Nv~gt~~ll~aa~~~~~~-~V~~SS-~~vyg~~~~-~---~~E~~------~~~p~~~Y~~sK~~~E~~~~~~~~~-  178 (362)
T 3sxp_A          112 MKTNYQAFLNLLEIARSKKAK-VIYASS-AGVYGNTKA-P---NVVGK------NESPENVYGFSKLCMDEFVLSHSND-  178 (362)
T ss_dssp             HHHHTHHHHHHHHHHHHTTCE-EEEEEE-GGGGCSCCS-S---BCTTS------CCCCSSHHHHHHHHHHHHHHHTTTT-
T ss_pred             HHHHHHHHHHHHHHHHHcCCc-EEEeCc-HHHhCCCCC-C---CCCCC------CCCCCChhHHHHHHHHHHHHHHhcc-
Confidence            578999999999999999987 999999 688876544 3   88887      5578899999999999999998765 


Q ss_pred             CCcEEEecCCceeCCCCCCCCh--hhHHHH-HHHHhCCccc---cCCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ec
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVN--ASIIHI-LKYLNGSAKT---YANSVQAYVHVRDVALAHILVYETPSASGRYLC-AE  154 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~--~~~~~~-~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~  154 (178)
                       ++++++||+++|||+......  ..+..+ .....+....   .+++.++|+|++|+|++++.+++.+..+ .|++ ++
T Consensus       179 -~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~~g-~~~i~~~  256 (362)
T 3sxp_A          179 -NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQKSG-VYNVGYS  256 (362)
T ss_dssp             -SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSSCE-EEEESCS
T ss_pred             -CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCCCC-EEEeCCC
Confidence             899999999999998654211  233333 3445555432   2467899999999999999999987654 8987 67


Q ss_pred             CccCHHHHHHHHHHhCC
Q 030406          155 SVLHRGEVVEILAKFFP  171 (178)
Q Consensus       155 ~~~s~~e~~~~i~~~~~  171 (178)
                      +++|+.|+++.+++.++
T Consensus       257 ~~~s~~e~~~~i~~~~g  273 (362)
T 3sxp_A          257 QARSYNEIVSILKEHLG  273 (362)
T ss_dssp             CEEEHHHHHHHHHHHHC
T ss_pred             CCccHHHHHHHHHHHcC
Confidence            88999999999999886

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.92  E-value=4.7e-24  Score=160.35  Aligned_cols=164  Identities=21%  Similarity=0.326  Sum_probs=127.6

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++ ++||+|| .++|+.....+   ++|+.|.... +..+.+.|+.+|..+|.+++.++++.
T Consensus       115 ~~~n~~~~~~l~~a~~~~~~-~~v~~SS-~~v~g~~~~~~---~~E~~~~~~~-~~~~~~~Y~~sK~~~E~~~~~~~~~~  188 (343)
T 2b69_A          115 LKTNTIGTLNMLGLAKRVGA-RLLLAST-SEVYGDPEVHP---QSEDYWGHVN-PIGPRACYDEGKRVAETMCYAYMKQE  188 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHTC-EEEEEEE-GGGGBSCSSSS---BCTTCCCBCC-SSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCC-cEEEECc-HHHhCCCCCCC---CcccccccCC-CCCCCCchHHHHHHHHHHHHHHHHHh
Confidence            57899999999999999886 8999999 68887654444   7887654322 33567889999999999999988888


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHH-HHHHHHhCCcc-cc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecCc
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASII-HILKYLNGSAK-TY--ANSVQAYVHVRDVALAHILVYETPSASGRYLC-AESV  156 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~-~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~~  156 (178)
                      +++++++||+++||+.........+. .+.....+... .+  +++.++|+|++|+|++++.+++.+. ++.|++ ++++
T Consensus       189 ~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~i~~~~~  267 (343)
T 2b69_A          189 GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV-SSPVNLGNPEE  267 (343)
T ss_dssp             CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC-CSCEEESCCCE
T ss_pred             CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCC-CCeEEecCCCC
Confidence            99999999999999975432122232 33445556553 23  4678999999999999999998653 568876 5678


Q ss_pred             cCHHHHHHHHHHhCCC
Q 030406          157 LHRGEVVEILAKFFPE  172 (178)
Q Consensus       157 ~s~~e~~~~i~~~~~~  172 (178)
                      +|++|+++.+++.++.
T Consensus       268 ~s~~e~~~~i~~~~g~  283 (343)
T 2b69_A          268 HTILEFAQLIKNLVGS  283 (343)
T ss_dssp             EEHHHHHHHHHHHHTC
T ss_pred             CcHHHHHHHHHHHhCC
Confidence            9999999999998753

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.92  E-value=1.6e-24  Score=161.46  Aligned_cols=164  Identities=20%  Similarity=0.230  Sum_probs=125.5

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccC-chHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK-NWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+.....+   ++|+++...  +..|. +.|+.+|..+|++++.++++
T Consensus        80 ~~~n~~~~~~l~~~~~~~~~~~~v~~SS-~~vyg~~~~~~---~~E~~~~~~--~~~p~~~~Y~~sK~~~E~~~~~~~~~  153 (321)
T 1e6u_A           80 IYQNMMIESNIIHAAHQNDVNKLLFLGS-SCIYPKLAKQP---MAESELLQG--TLEPTNEPYAIAKIAGIKLCESYNRQ  153 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCEEEEECC-GGGSCTTCCSS---BCGGGTTSS--CCCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCeEEEEcc-HHHcCCCCCCC---cCccccccC--CCCCCCCccHHHHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999 68887654433   777754221  12343 68999999999999999888


Q ss_pred             cCCcEEEecCCceeCCCCCCCC--hhhHHHHHH-HH----hC-Cc-ccc--CCCCcccccHHHHHHHHHHhhcCCCC---
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTV--NASIIHILK-YL----NG-SA-KTY--ANSVQAYVHVRDVALAHILVYETPSA---  146 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~--~~~~~~~~~-~~----~~-~~-~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~---  146 (178)
                      .+++++++||+++||++.....  ...+..+.. ..    .| .. ...  +++.++|+|++|+|++++.+++.+..   
T Consensus       154 ~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~  233 (321)
T 1e6u_A          154 YGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWL  233 (321)
T ss_dssp             HCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHH
T ss_pred             hCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccc
Confidence            8999999999999999764311  122333332 22    23 23 222  56789999999999999999988654   


Q ss_pred             ------CCcEEE-ecCccCHHHHHHHHHHhCC
Q 030406          147 ------SGRYLC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       147 ------~~~~~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                            ++.||+ +++++|++|+++.+++.++
T Consensus       234 ~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g  265 (321)
T 1e6u_A          234 ENTQPMLSHINVGTGVDCTIRELAQTIAKVVG  265 (321)
T ss_dssp             HTSBTTBCCEEESCSCCEEHHHHHHHHHHHHT
T ss_pred             cccccCCceEEeCCCCCccHHHHHHHHHHHhC
Confidence                  368987 5678999999999999875

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.92  E-value=8.1e-24  Score=159.19  Aligned_cols=160  Identities=21%  Similarity=0.225  Sum_probs=123.5

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhccc-CchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT-KNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+.....+   ++|++      +..| .+.|+.+|..+|.+++.++.+
T Consensus       105 ~~~n~~~~~~l~~~~~~~~~~~iv~~SS-~~~~g~~~~~~---~~E~~------~~~p~~~~Y~~sK~~~e~~~~~~~~~  174 (348)
T 1ek6_A          105 YRVNLTGTIQLLEIMKAHGVKNLVFSSS-ATVYGNPQYLP---LDEAH------PTGGCTNPYGKSKFFIEEMIRDLCQA  174 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCEEEEEEE-GGGGCSCSSSS---BCTTS------CCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEECc-HHHhCCCCCCC---cCCCC------CCCCCCCchHHHHHHHHHHHHHHHhc
Confidence            5789999999999999999999999999 68887654444   88886      3345 789999999999999998776


Q ss_pred             -cCCcEEEecCCceeCCCCCC---C-----ChhhHHHHHHHHhC--Cc-cc--------cCCCCcccccHHHHHHHHHHh
Q 030406           81 -RGVDLVVVNPVLVLGPLLQS---T-----VNASIIHILKYLNG--SA-KT--------YANSVQAYVHVRDVALAHILV  140 (178)
Q Consensus        81 -~~~~~~i~R~~~v~G~~~~~---~-----~~~~~~~~~~~~~~--~~-~~--------~~~~~~~~i~v~D~a~~~~~~  140 (178)
                       .+++++++||+++||++..+   .     ....+..+.....+  .. ..        .|++.++|+|++|+|++++.+
T Consensus       175 ~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~  254 (348)
T 1ek6_A          175 DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAA  254 (348)
T ss_dssp             CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHH
T ss_pred             CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHH
Confidence             23999999999999985311   0     12244445555542  22 11        245678999999999999999


Q ss_pred             hcCC--CCC-CcEEE-ecCccCHHHHHHHHHHhCC
Q 030406          141 YETP--SAS-GRYLC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       141 ~~~~--~~~-~~~~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                      ++.+  ..+ +.||+ +++++|++|+++.+++.++
T Consensus       255 ~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g  289 (348)
T 1ek6_A          255 LRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASG  289 (348)
T ss_dssp             HHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHC
T ss_pred             HhcccccCCceEEEeCCCCCccHHHHHHHHHHHhC
Confidence            9764  234 58887 5678999999999999874

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.92  E-value=5.1e-24  Score=160.92  Aligned_cols=160  Identities=16%  Similarity=0.147  Sum_probs=123.9

Q ss_pred             chhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.++.+++++|++.+ +++|||+|| .++|+.....  .+++|++      +..+.+.|+.+|..+|++++.++.+
T Consensus       104 ~~~n~~~~~~l~~a~~~~~~~~~~v~~SS-~~vyg~~~~~--~~~~E~~------~~~~~~~Y~~sK~~~e~~~~~~~~~  174 (357)
T 1rkx_A          104 YSTNVMGTVYLLEAIRHVGGVKAVVNITS-DKCYDNKEWI--WGYRENE------AMGGYDPYSNSKGCAELVTSSYRNS  174 (357)
T ss_dssp             HHHHTHHHHHHHHHHHHHCCCCEEEEECC-GGGBCCCCSS--SCBCTTS------CBCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEecC-HHHhCCCCcC--CCCCCCC------CCCCCCccHHHHHHHHHHHHHHHHH
Confidence            5789999999999999876 899999999 5788754321  1267775      4467889999999999999998765


Q ss_pred             c---------CCcEEEecCCceeCCCCCCCChhhHHHHH-HHHhCCcccc--CCCCcccccHHHHHHHHHHhhcC----C
Q 030406           81 R---------GVDLVVVNPVLVLGPLLQSTVNASIIHIL-KYLNGSAKTY--ANSVQAYVHVRDVALAHILVYET----P  144 (178)
Q Consensus        81 ~---------~~~~~i~R~~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~----~  144 (178)
                      +         |++++++||+++||++.... ...+..+. ....+.....  +++.++|+|++|+|++++.+++.    +
T Consensus       175 ~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~  253 (357)
T 1rkx_A          175 FFNPANYGQHGTAVATVRAGNVIGGGDWAL-DRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDG  253 (357)
T ss_dssp             HSCGGGHHHHCCEEEEEECCCEECTTCCCS-SCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHHHHHHHTC
T ss_pred             HhhhhccccCCceEEEEeeceeeCCCCCcc-ccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHHHHHHHHhhhhcC
Confidence            4         89999999999999975432 12333333 4445555333  45688999999999999998874    2


Q ss_pred             -CCCCcEEEe---cCccCHHHHHHHHHHhCC
Q 030406          145 -SASGRYLCA---ESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       145 -~~~~~~~~~---~~~~s~~e~~~~i~~~~~  171 (178)
                       ..++.||++   ++++|++|+++.+++.++
T Consensus       254 ~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g  284 (357)
T 1rkx_A          254 AEYAEGWNFGPNDADATPVKNIVEQMVKYWG  284 (357)
T ss_dssp             GGGCSEEECCCCGGGCEEHHHHHHHHHHHHC
T ss_pred             CCCCceEEECCCCCCcccHHHHHHHHHHHhC
Confidence             345689875   368999999999999875

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.92  E-value=3.6e-24  Score=161.82  Aligned_cols=159  Identities=16%  Similarity=0.189  Sum_probs=126.7

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++ +|||+|| .++|+.....+   ++|++      +..|.+.|+.+|..+|.+++.++.+.
T Consensus       137 ~~~n~~~~~~ll~a~~~~~~-r~V~~SS-~~v~g~~~~~~---~~E~~------~~~p~~~Y~~sK~~~E~~~~~~~~~~  205 (357)
T 2x6t_A          137 MDNNYQYSKELLHYCLEREI-PFLYASS-AATYGGRTSDF---IESRE------YEKPLNVFGYSKFLFDEYVRQILPEA  205 (357)
T ss_dssp             HHHTHHHHHHHHHHHHHHTC-CEEEEEE-GGGGCSCSSCC---CSSGG------GCCCSSHHHHHHHHHHHHHHHHGGGC
T ss_pred             HHHHHHHHHHHHHHHHHcCC-eEEEEcc-hHHhCCCCCCC---cCCcC------CCCCCChhHHHHHHHHHHHHHHHHHc
Confidence            57899999999999999888 9999999 57887554333   77775      55788999999999999999998888


Q ss_pred             CCcEEEecCCceeCCCCCCCC--hhhHHHHH-HHHhCCcc-cc--CCC-CcccccHHHHHHHHHHhhcCCCCCCcEEE-e
Q 030406           82 GVDLVVVNPVLVLGPLLQSTV--NASIIHIL-KYLNGSAK-TY--ANS-VQAYVHVRDVALAHILVYETPSASGRYLC-A  153 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~--~~~~~~~~-~~~~~~~~-~~--~~~-~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~  153 (178)
                      +++++++||+++||++.....  ...+..+. ....+... .+  +++ .++|+|++|+|++++.+++.+. ++.|++ +
T Consensus       206 g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-~~~~~i~~  284 (357)
T 2x6t_A          206 NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-SGIFNLGT  284 (357)
T ss_dssp             SSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC-CEEEEESC
T ss_pred             CCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC-CCeEEecC
Confidence            999999999999999754311  12333333 34445442 23  356 7899999999999999998876 668987 5


Q ss_pred             cCccCHHHHHHHHHHhCCC
Q 030406          154 ESVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       154 ~~~~s~~e~~~~i~~~~~~  172 (178)
                      ++++|++|+++.+++.++.
T Consensus       285 ~~~~s~~e~~~~i~~~~g~  303 (357)
T 2x6t_A          285 GRAESFQAVADATLAYHKK  303 (357)
T ss_dssp             SCCEEHHHHHHHHHHHHTC
T ss_pred             CCcccHHHHHHHHHHHcCC
Confidence            6789999999999998854

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.92  E-value=8.5e-24  Score=159.10  Aligned_cols=161  Identities=20%  Similarity=0.239  Sum_probs=125.7

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCC---------CCCCccCCCCCCchhhhcccCchHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNR---------SPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEK   72 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~---------~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~   72 (178)
                      +++|+.++.+++++|++.++ +|||+|| .++|+....         ....+++|++      +..+.+.|+.+|..+|.
T Consensus        99 ~~~Nv~g~~~l~~a~~~~~~-~~v~~SS-~~vyg~~~~~~~~~~~~~~~~~~~~E~~------~~~~~~~Y~~sK~~~e~  170 (348)
T 1oc2_A           99 IHTNFIGTYTLLEAARKYDI-RFHHVST-DEVYGDLPLREDLPGHGEGPGEKFTAET------NYNPSSPYSSTKAASDL  170 (348)
T ss_dssp             HHHHTHHHHHHHHHHHHHTC-EEEEEEE-GGGGCCBCCGGGSTTTTCSTTSSBCTTS------CCCCCSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCC-eEEEecc-cceeCCCcccccccccccccCCCcCCCC------CCCCCCccHHHHHHHHH
Confidence            57899999999999999887 9999999 578864321         0012377775      44678899999999999


Q ss_pred             HHHHHHHhcCCcEEEecCCceeCCCCCCCChhhHH-HHHHHHhCCccc---cCCCCcccccHHHHHHHHHHhhcCCCCCC
Q 030406           73 AAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASII-HILKYLNGSAKT---YANSVQAYVHVRDVALAHILVYETPSASG  148 (178)
Q Consensus        73 ~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~~~~~~~  148 (178)
                      +++.++.+.|++++++||+++||+.....  ..+. .+.....+....   .+++.++|+|++|+|++++.+++.+..++
T Consensus       171 ~~~~~~~~~gi~~~ilrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~g~  248 (348)
T 1oc2_A          171 IVKAWVRSFGVKATISNCSNNYGPYQHIE--KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRMGE  248 (348)
T ss_dssp             HHHHHHHHHCCEEEEEEECCEESTTCCTT--SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCCTTC
T ss_pred             HHHHHHHHhCCCEEEEeeceeeCCCCCcc--chHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCCCCCC
Confidence            99999888899999999999999986432  2222 233445555432   24678899999999999999998765566


Q ss_pred             cEEE-ecCccCHHHHHHHHHHhCCC
Q 030406          149 RYLC-AESVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       149 ~~~~-~~~~~s~~e~~~~i~~~~~~  172 (178)
                      .|++ +++++|++|+++.+++.++.
T Consensus       249 ~~~i~~~~~~s~~e~~~~i~~~~g~  273 (348)
T 1oc2_A          249 TYLIGADGEKNNKEVLELILEKMGQ  273 (348)
T ss_dssp             EEEECCSCEEEHHHHHHHHHHHTTC
T ss_pred             eEEeCCCCCCCHHHHHHHHHHHhCC
Confidence            8987 56789999999999998854

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.91  E-value=7.3e-24  Score=161.33  Aligned_cols=163  Identities=14%  Similarity=0.105  Sum_probs=119.1

Q ss_pred             chhHHHHHHHHHHHHHhC-CCCEEEEeccccccccCCCCCCCCccC--CCCCCchhhhc-ccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAVYMDPNRSPDDVVD--ESCWSDLEFCK-NTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~--E~~~~~~~~~~-~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.+++++|++. ++++|||+|| .++|+.....+   ++  |++|..   +. .|.+.|+.+|..+|.+++.+
T Consensus       123 ~~~nv~~~~~ll~a~~~~~~~~~~V~~SS-~~vyg~~~~~~---~~~~E~~~~~---~~~~~~~~Y~~sK~~~E~~~~~~  195 (377)
T 2q1s_A          123 HENNTLTTLKLYERLKHFKRLKKVVYSAA-GCSIAEKTFDD---AKATEETDIV---SLHNNDSPYSMSKIFGEFYSVYY  195 (377)
T ss_dssp             HHHHTHHHHHHHHHHTTCSSCCEEEEEEE-C-----------------CCCCCC---CSSCCCSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEeCC-HHHcCCCCCCC---cCcccccccc---cccCCCCchHHHHHHHHHHHHHH
Confidence            578999999999999998 8999999999 68887654333   67  775321   22 56789999999999999998


Q ss_pred             HHhcCCcEEEecCCceeCCCC---------CCCC--hhhHHHH-HHHHhCCcc-cc--CCCCcccccHHHHHHH-HHHhh
Q 030406           78 AVARGVDLVVVNPVLVLGPLL---------QSTV--NASIIHI-LKYLNGSAK-TY--ANSVQAYVHVRDVALA-HILVY  141 (178)
Q Consensus        78 ~~~~~~~~~i~R~~~v~G~~~---------~~~~--~~~~~~~-~~~~~~~~~-~~--~~~~~~~i~v~D~a~~-~~~~~  141 (178)
                      +.+.+++++++||+++||+..         ....  ...+..+ .....+... ..  +++.++|+|++|+|++ ++.++
T Consensus       196 ~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~  275 (377)
T 2q1s_A          196 HKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAA  275 (377)
T ss_dssp             HHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHH
T ss_pred             HHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHH
Confidence            888899999999999999975         2100  1223333 344455542 23  4678999999999999 99999


Q ss_pred             cCCCCCCcEEE-ecCccCHHHHHHHHHHhCCC
Q 030406          142 ETPSASGRYLC-AESVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       142 ~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~~  172 (178)
                      +.+.. +.|++ +++++|++|+++.+++.++.
T Consensus       276 ~~~~~-g~~~i~~~~~~s~~e~~~~i~~~~g~  306 (377)
T 2q1s_A          276 DGTPG-GVYNIASGKETSIADLATKINEITGN  306 (377)
T ss_dssp             HCCTT-EEEECCCCCCEEHHHHHHHHHHHHTC
T ss_pred             hcCCC-CeEEecCCCceeHHHHHHHHHHHhCC
Confidence            88764 48887 55789999999999998753

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=3.6e-23  Score=157.25  Aligned_cols=160  Identities=15%  Similarity=0.070  Sum_probs=127.0

Q ss_pred             chhHHHHHHHHHHHHHhCCC---CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKV---RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~---~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.+++++|++.++   ++|||+|| .++|+.....+   ++|++      +..|.+.|+.+|..+|.+++.++
T Consensus       126 ~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS-~~~~~~~~~~~---~~E~~------~~~~~~~Y~~sK~~~e~~~~~~~  195 (375)
T 1t2a_A          126 ADVDGVGTLRLLDAVKTCGLINSVKFYQAST-SELYGKVQEIP---QKETT------PFYPRSPYGAAKLYAYWIVVNFR  195 (375)
T ss_dssp             HHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE-GGGTCSCSSSS---BCTTS------CCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCccceEEEecc-hhhhCCCCCCC---CCccC------CCCCCChhHHHHHHHHHHHHHHH
Confidence            57899999999999999887   89999999 67887554333   78886      44677899999999999999998


Q ss_pred             HhcCCcEEEecCCceeCCCCCCCCh-hhH-HHHHHHHhCCcc--cc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE
Q 030406           79 VARGVDLVVVNPVLVLGPLLQSTVN-ASI-IHILKYLNGSAK--TY--ANSVQAYVHVRDVALAHILVYETPSASGRYLC  152 (178)
Q Consensus        79 ~~~~~~~~i~R~~~v~G~~~~~~~~-~~~-~~~~~~~~~~~~--~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~  152 (178)
                      .+++++++++|++++|||+...... ..+ ..+.....+..+  ..  +++.++|+|++|+|++++.+++.+. .+.||+
T Consensus       196 ~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~-~~~~ni  274 (375)
T 1t2a_A          196 EAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE-PEDFVI  274 (375)
T ss_dssp             HHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS-CCCEEE
T ss_pred             HHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC-CceEEE
Confidence            8889999999999999997543211 112 233344555432  22  4678999999999999999998765 478876


Q ss_pred             -ecCccCHHHHHHHHHHhCCC
Q 030406          153 -AESVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       153 -~~~~~s~~e~~~~i~~~~~~  172 (178)
                       +++++|++|+++.+++.++.
T Consensus       275 ~~~~~~s~~e~~~~i~~~~g~  295 (375)
T 1t2a_A          275 ATGEVHSVREFVEKSFLHIGK  295 (375)
T ss_dssp             CCSCCEEHHHHHHHHHHHTTC
T ss_pred             eCCCcccHHHHHHHHHHHhCC
Confidence             56789999999999998853

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.91  E-value=1.6e-23  Score=157.24  Aligned_cols=158  Identities=20%  Similarity=0.234  Sum_probs=123.0

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhccc----CchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT----KNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~----~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+..... .. .+|++      +..|    .+.|+.+|..+|.+++.+
T Consensus        99 ~~~n~~~~~~l~~a~~~~~~~~~v~~SS-~~~~~~~~~~-~~-~~E~~------~~~p~~~~~~~Y~~sK~~~e~~~~~~  169 (342)
T 2x4g_A           99 VASALGQTNPFYAACLQARVPRILYVGS-AYAMPRHPQG-LP-GHEGL------FYDSLPSGKSSYVLCKWALDEQAREQ  169 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCSCEEEECC-GGGSCCCTTS-SC-BCTTC------CCSSCCTTSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCeEEEECC-HHhhCcCCCC-CC-CCCCC------CCCccccccChHHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999 5777654321 12 36776      3456    789999999999999998


Q ss_pred             HHhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEEecCcc
Q 030406           78 AVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVL  157 (178)
Q Consensus        78 ~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~  157 (178)
                      +++ |++++++||+++||+..... . ....+.....+..+..+++.++|+|++|+|++++.+++.+..++.|++++..+
T Consensus       170 ~~~-g~~~~ilrp~~v~g~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~g~~~~v~~~~~  246 (342)
T 2x4g_A          170 ARN-GLPVVIGIPGMVLGELDIGP-T-TGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIGERYLLTGHNL  246 (342)
T ss_dssp             HHT-TCCEEEEEECEEECSCCSSC-S-TTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSCTTCEEEECCEEE
T ss_pred             hhc-CCcEEEEeCCceECCCCccc-c-HHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCCCCceEEEcCCcc
Confidence            877 99999999999999875211 1 11223344455543337788999999999999999998776666898744339


Q ss_pred             CHHHHHHHHHHhCC
Q 030406          158 HRGEVVEILAKFFP  171 (178)
Q Consensus       158 s~~e~~~~i~~~~~  171 (178)
                      |++|+++.+++.++
T Consensus       247 s~~e~~~~i~~~~g  260 (342)
T 2x4g_A          247 EMADLTRRIAELLG  260 (342)
T ss_dssp             EHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHhC
Confidence            99999999999874

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.91  E-value=2.5e-23  Score=158.51  Aligned_cols=165  Identities=12%  Similarity=0.107  Sum_probs=125.5

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCC--CCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSP--DDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~--~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+.....+  ..+++|+++.    +..|.+.|+.+|..+|.+++.++.
T Consensus       118 ~~~Nv~g~~~ll~a~~~~~~~~~V~~SS-~~v~~~~~~~~~~~~~~~E~~~~----~~~~~~~Y~~sK~~~E~~~~~~~~  192 (379)
T 2c5a_A          118 MYNNTMISFNMIEAARINGIKRFFYASS-ACIYPEFKQLETTNVSLKESDAW----PAEPQDAFGLEKLATEELCKHYNK  192 (379)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCSEEEEEEE-GGGSCGGGSSSSSSCEECGGGGS----SBCCSSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEEee-hheeCCCCCCCccCCCcCcccCC----CCCCCChhHHHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999 57776432210  1125665421    335778999999999999999988


Q ss_pred             hcCCcEEEecCCceeCCCCCCCCh--hhHHH-HHHHHhCCc--ccc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE
Q 030406           80 ARGVDLVVVNPVLVLGPLLQSTVN--ASIIH-ILKYLNGSA--KTY--ANSVQAYVHVRDVALAHILVYETPSASGRYLC  152 (178)
Q Consensus        80 ~~~~~~~i~R~~~v~G~~~~~~~~--~~~~~-~~~~~~~~~--~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~  152 (178)
                      +.|++++++||+++||+.......  ..+.. +.....+..  ..+  +++.++|+|++|+|++++.+++.+ .++.|++
T Consensus       193 ~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~-~~~~~ni  271 (379)
T 2c5a_A          193 DFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-FREPVNI  271 (379)
T ss_dssp             HHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS-CCSCEEE
T ss_pred             HHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc-CCCeEEe
Confidence            889999999999999987543211  12332 334445543  223  457899999999999999999876 4568876


Q ss_pred             -ecCccCHHHHHHHHHHhCCC
Q 030406          153 -AESVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       153 -~~~~~s~~e~~~~i~~~~~~  172 (178)
                       +++.+|++|+++.+++.++.
T Consensus       272 ~~~~~~s~~e~~~~i~~~~g~  292 (379)
T 2c5a_A          272 GSDEMVSMNEMAEMVLSFEEK  292 (379)
T ss_dssp             CCCCCEEHHHHHHHHHHTTTC
T ss_pred             CCCCccCHHHHHHHHHHHhCC
Confidence             56889999999999998853

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.91  E-value=8.6e-23  Score=153.05  Aligned_cols=171  Identities=26%  Similarity=0.355  Sum_probs=125.6

Q ss_pred             chhHHHHHHHHHHHHHh-CCCCEEEEeccccccccCCCC-CCCCccCCCCCCchhh----------hcccCchHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE-AKVRRVVFTSSIGAVYMDPNR-SPDDVVDESCWSDLEF----------CKNTKNWYCYGKAV   69 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~-~~~~~~i~~Ss~~~~~~~~~~-~~~~~~~E~~~~~~~~----------~~~~~~~Y~~sK~~   69 (178)
                      +++|+.++.+++++|++ .++++|||+|| .++|+.... .+..+++|++|.+...          +..|.+.|+.+|..
T Consensus       104 ~~~n~~g~~~ll~~~~~~~~~~~iv~~SS-~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~  182 (342)
T 1y1p_A          104 VTPAIGGTLNALRAAAATPSVKRFVLTSS-TVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTE  182 (342)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTCCEEEEECC-GGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCcEEEEecc-HHHhcCCCCCCCCcccCccccCchhhhhhccccccccccchHHHHHHHHH
Confidence            57899999999999985 67899999999 456543321 1123488887643211          22466889999999


Q ss_pred             HHHHHHHHHHhc--CCcEEEecCCceeCCCCCCCChh-hHH-HHHHHHhCCccc-cC-CCCcccccHHHHHHHHHHhhcC
Q 030406           70 AEKAAWEEAVAR--GVDLVVVNPVLVLGPLLQSTVNA-SII-HILKYLNGSAKT-YA-NSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        70 ~E~~~~~~~~~~--~~~~~i~R~~~v~G~~~~~~~~~-~~~-~~~~~~~~~~~~-~~-~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      +|.+++.++.++  +++++++||+++||+........ .+. .+.....+.... .+ .+.++|+|++|+|++++.+++.
T Consensus       183 ~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~  262 (342)
T 1y1p_A          183 AELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL  262 (342)
T ss_dssp             HHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcC
Confidence            999999988765  78899999999999975442111 233 333445555432 22 2678999999999999999987


Q ss_pred             CCCCC-cEEEecCccCHHHHHHHHHHhCCCC
Q 030406          144 PSASG-RYLCAESVLHRGEVVEILAKFFPEY  173 (178)
Q Consensus       144 ~~~~~-~~~~~~~~~s~~e~~~~i~~~~~~~  173 (178)
                      +...+ .++++++.+|+.|+++.+++.++..
T Consensus       263 ~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~  293 (342)
T 1y1p_A          263 PQIERRRVYGTAGTFDWNTVLATFRKLYPSK  293 (342)
T ss_dssp             TTCCSCEEEECCEEECHHHHHHHHHHHCTTS
T ss_pred             cccCCceEEEeCCCCCHHHHHHHHHHHCCCc
Confidence            65545 4556677899999999999998753

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.91  E-value=3.6e-23  Score=155.13  Aligned_cols=160  Identities=24%  Similarity=0.232  Sum_probs=121.6

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhccc-CchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT-KNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+.....+   ++|+.      +..| .+.|+.+|..+|.+++.++.+
T Consensus        97 ~~~n~~~~~~l~~~~~~~~~~~iv~~SS-~~~~g~~~~~~---~~e~~------~~~~~~~~Y~~sK~~~e~~~~~~~~~  166 (338)
T 1udb_A           97 YDNNVNGTLRLISAMRAANVKNFIFSSS-ATVYGDNPKIP---YVESF------PTGTPQSPYGKSKLMVEQILTDLQKA  166 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEE-GGGGCSCCSSS---BCTTS------CCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCeEEEEcc-HHHhCCCCCCC---cCccc------CCCCCCChHHHHHHHHHHHHHHHHHh
Confidence            5789999999999999988999999999 68887654333   77775      2223 689999999999999998877


Q ss_pred             c-CCcEEEecCCceeCCCCCC------C--ChhhHHHHHHHHhCCc---cc--------cCCCCcccccHHHHHHHHHHh
Q 030406           81 R-GVDLVVVNPVLVLGPLLQS------T--VNASIIHILKYLNGSA---KT--------YANSVQAYVHVRDVALAHILV  140 (178)
Q Consensus        81 ~-~~~~~i~R~~~v~G~~~~~------~--~~~~~~~~~~~~~~~~---~~--------~~~~~~~~i~v~D~a~~~~~~  140 (178)
                      . +++++++||+++||++...      .  ....+..+.....+..   ..        .|++.++|+|++|+|++++.+
T Consensus       167 ~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~  246 (338)
T 1udb_A          167 QPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVA  246 (338)
T ss_dssp             STTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHH
T ss_pred             cCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHHHHHHHH
Confidence            6 8999999999999985311      0  1223444444444322   11        245678999999999999998


Q ss_pred             hcCC--CCC-CcEEE-ecCccCHHHHHHHHHHhCC
Q 030406          141 YETP--SAS-GRYLC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       141 ~~~~--~~~-~~~~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                      ++..  ..+ +.||+ +++++|++|+++.+++.++
T Consensus       247 l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g  281 (338)
T 1udb_A          247 MEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACG  281 (338)
T ss_dssp             HHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHT
T ss_pred             HhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhC
Confidence            8753  233 48887 5678999999999999874

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.91  E-value=9.7e-23  Score=154.58  Aligned_cols=159  Identities=14%  Similarity=0.090  Sum_probs=126.3

Q ss_pred             chhHHHHHHHHHHHHHhCCC---CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKV---RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~---~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.+++++|++.++   ++|||+|| .++|+.....+   ++|++      +..|.+.|+.+|..+|.+++.++
T Consensus       102 ~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS-~~v~g~~~~~~---~~E~~------~~~~~~~Y~~sK~~~e~~~~~~~  171 (372)
T 1db3_A          102 ADVDAMGTLRLLEAIRFLGLEKKTRFYQAST-SELYGLVQEIP---QKETT------PFYPRSPYAVAKLYAYWITVNYR  171 (372)
T ss_dssp             HHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE-GGGGTTCCSSS---BCTTS------CCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCcEEEEeCC-hhhhCCCCCCC---CCccC------CCCCCChHHHHHHHHHHHHHHHH
Confidence            46899999999999999887   89999999 68887654333   78876      44678899999999999999998


Q ss_pred             HhcCCcEEEecCCceeCCCCCCCCh-hhHH-HHHHHHhCCcc--cc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE
Q 030406           79 VARGVDLVVVNPVLVLGPLLQSTVN-ASII-HILKYLNGSAK--TY--ANSVQAYVHVRDVALAHILVYETPSASGRYLC  152 (178)
Q Consensus        79 ~~~~~~~~i~R~~~v~G~~~~~~~~-~~~~-~~~~~~~~~~~--~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~  152 (178)
                      .+++++++++|++++||++...... ..+. .+.....|..+  ..  +++.++|+|++|+|++++.+++.+. ++.||+
T Consensus       172 ~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~-~~~~ni  250 (372)
T 1db3_A          172 ESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ-PEDFVI  250 (372)
T ss_dssp             HHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS-CCCEEE
T ss_pred             HHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhcCC-CceEEE
Confidence            8889999999999999997543211 1222 23344455432  22  4678999999999999999998765 478986


Q ss_pred             -ecCccCHHHHHHHHHHhCC
Q 030406          153 -AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       153 -~~~~~s~~e~~~~i~~~~~  171 (178)
                       +++++|++|+++.+++.++
T Consensus       251 ~~~~~~s~~e~~~~i~~~~g  270 (372)
T 1db3_A          251 ATGVQYSVRQFVEMAAAQLG  270 (372)
T ss_dssp             CCCCCEEHHHHHHHHHHTTT
T ss_pred             cCCCceeHHHHHHHHHHHhC
Confidence             5678999999999999875

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.90  E-value=3.5e-23  Score=156.46  Aligned_cols=161  Identities=20%  Similarity=0.230  Sum_probs=124.5

Q ss_pred             chhHHHHHHHHHHHHHhC--CCC-------EEEEeccccccccCCCC--C-----CCCccCCCCCCchhhhcccCchHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVR-------RVVFTSSIGAVYMDPNR--S-----PDDVVDESCWSDLEFCKNTKNWYCY   65 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~-------~~i~~Ss~~~~~~~~~~--~-----~~~~~~E~~~~~~~~~~~~~~~Y~~   65 (178)
                      +++|+.++.+++++|++.  +++       +|||+|| .++|+....  .     ...+++|++      +..+.+.|+.
T Consensus        97 ~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS-~~v~g~~~~~~~~~~~~~~~~~~E~~------~~~~~~~Y~~  169 (361)
T 1kew_A           97 IETNIVGTYALLEVARKYWSALGEDKKNNFRFHHIST-DEVYGDLPHPDEVENSVTLPLFTETT------AYAPSSPYSA  169 (361)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEE-GGGGCCCCCGGGSCTTSCCCCBCTTS------CCCCCSHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCC-HHHhCCCcccccccccccCCCCCCCC------CCCCCCccHH
Confidence            578999999999999998  887       9999999 578875421  0     000267765      4467889999


Q ss_pred             HHHHHHHHHHHHHHhcCCcEEEecCCceeCCCCCCCChhhHH-HHHHHHhCCc-ccc--CCCCcccccHHHHHHHHHHhh
Q 030406           66 GKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASII-HILKYLNGSA-KTY--ANSVQAYVHVRDVALAHILVY  141 (178)
Q Consensus        66 sK~~~E~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~-~~~~~~~~~~-~~~--~~~~~~~i~v~D~a~~~~~~~  141 (178)
                      +|..+|.+++.++.+.|++++++||+++||+.....  ..+. .+.....+.. +.+  +.+.++|+|++|+|++++.++
T Consensus       170 sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~  247 (361)
T 1kew_A          170 SKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE--KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVV  247 (361)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT--SHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc--cHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHH
Confidence            999999999999888899999999999999985432  2223 2334455554 222  457889999999999999999


Q ss_pred             cCCCCCCcEEEe-cCccCHHHHHHHHHHhCC
Q 030406          142 ETPSASGRYLCA-ESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       142 ~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~  171 (178)
                      +.+..++.|+++ ++++|+.|+++.+++.++
T Consensus       248 ~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g  278 (361)
T 1kew_A          248 TEGKAGETYNIGGHNEKKNLDVVFTICDLLD  278 (361)
T ss_dssp             HHCCTTCEEEECCCCEEEHHHHHHHHHHHHH
T ss_pred             hCCCCCCEEEecCCCeeeHHHHHHHHHHHhC
Confidence            876556689874 567999999999988763

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.90  E-value=2.1e-23  Score=153.09  Aligned_cols=145  Identities=20%  Similarity=0.137  Sum_probs=117.8

Q ss_pred             HHHHHHHHHHHh--CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcCCc
Q 030406            7 IGTKNVIVAAAE--AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGVD   84 (178)
Q Consensus         7 ~~t~~ll~~~~~--~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~   84 (178)
                      ..+.+++++|++  .++++|||+|| .++|+.....+   ++|++      +..|.+.|+.+|..+|++++.+   .+++
T Consensus        79 ~~~~~l~~a~~~~~~~~~~~v~~Ss-~~vyg~~~~~~---~~E~~------~~~p~~~Y~~sK~~~E~~~~~~---~~~~  145 (286)
T 3ius_A           79 PVLAALGDQIAARAAQFRWVGYLST-TAVYGDHDGAW---VDETT------PLTPTAARGRWRVMAEQQWQAV---PNLP  145 (286)
T ss_dssp             HHHHHHHHHHHHTGGGCSEEEEEEE-GGGGCCCTTCE---ECTTS------CCCCCSHHHHHHHHHHHHHHHS---TTCC
T ss_pred             HHHHHHHHHHHhhcCCceEEEEeec-ceecCCCCCCC---cCCCC------CCCCCCHHHHHHHHHHHHHHhh---cCCC
Confidence            347899999998  68999999999 68898665444   88887      5578899999999999999876   5899


Q ss_pred             EEEecCCceeCCCCCCCChhhHHHHHHHHhCCcccc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecCccCHHH
Q 030406           85 LVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY--ANSVQAYVHVRDVALAHILVYETPSASGRYLC-AESVLHRGE  161 (178)
Q Consensus        85 ~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~~~s~~e  161 (178)
                      ++++||+++||++....        .+...+.....  +++.++|+|++|+|++++.+++.+..++.||+ +++++|+.|
T Consensus       146 ~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e  217 (286)
T 3ius_A          146 LHVFRLAGIYGPGRGPF--------SKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPDPGAVYNVCDDEPVPPQD  217 (286)
T ss_dssp             EEEEEECEEEBTTBSSS--------TTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCCTTCEEEECCSCCBCHHH
T ss_pred             EEEEeccceECCCchHH--------HHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCCCCCCEEEEeCCCCccHHH
Confidence            99999999999975431        12233443222  45789999999999999999999887779987 577899999


Q ss_pred             HHHHHHHhCCC
Q 030406          162 VVEILAKFFPE  172 (178)
Q Consensus       162 ~~~~i~~~~~~  172 (178)
                      +++.+++.++.
T Consensus       218 ~~~~i~~~~g~  228 (286)
T 3ius_A          218 VIAYAAELQGL  228 (286)
T ss_dssp             HHHHHHHHHTC
T ss_pred             HHHHHHHHcCC
Confidence            99999998853

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.90  E-value=3.5e-23  Score=152.75  Aligned_cols=151  Identities=15%  Similarity=0.050  Sum_probs=119.9

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++ +|||+|| .++|+.....+   ++|++      +..|.+.|+.+|..+|++++.+.   
T Consensus        78 ~~~n~~~~~~l~~a~~~~~~-~~v~~SS-~~vy~~~~~~~---~~E~~------~~~p~~~Y~~sK~~~E~~~~~~~---  143 (299)
T 1n2s_A           78 QLLNATSVEAIAKAANETGA-WVVHYST-DYVFPGTGDIP---WQETD------ATSPLNVYGKTKLAGEKALQDNC---  143 (299)
T ss_dssp             HHHHTHHHHHHHHHHTTTTC-EEEEEEE-GGGSCCCTTCC---BCTTS------CCCCSSHHHHHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHHHHHHHHcCC-cEEEEec-ccEEeCCCCCC---CCCCC------CCCCccHHHHHHHHHHHHHHHhC---
Confidence            57899999999999999887 8999999 58887654434   78886      45678899999999999998764   


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHH-HHHhCCcc-ccCCCCcccccHHHHHHHHHHhhcCC--C--CCCcEEE-ec
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHIL-KYLNGSAK-TYANSVQAYVHVRDVALAHILVYETP--S--ASGRYLC-AE  154 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~--~--~~~~~~~-~~  154 (178)
                       .+++++||+++||++...    .+..+. ....+... ..+++.++|+|++|+|++++.+++.+  .  .++.||+ ++
T Consensus       144 -~~~~ilRp~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~  218 (299)
T 1n2s_A          144 -PKHLIFRTSWVYAGKGNN----FAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAG  218 (299)
T ss_dssp             -SSEEEEEECSEECSSSCC----HHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCB
T ss_pred             -CCeEEEeeeeecCCCcCc----HHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCC
Confidence             389999999999987542    233333 33445443 45778899999999999999999876  2  2668986 56


Q ss_pred             CccCHHHHHHHHHHhCC
Q 030406          155 SVLHRGEVVEILAKFFP  171 (178)
Q Consensus       155 ~~~s~~e~~~~i~~~~~  171 (178)
                      +++|++|+++.+++.++
T Consensus       219 ~~~s~~e~~~~i~~~~g  235 (299)
T 1n2s_A          219 GTTTWHDYAALVFDEAR  235 (299)
T ss_dssp             SCEEHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhC
Confidence            78999999999988763

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.89  E-value=4.7e-22  Score=149.21  Aligned_cols=160  Identities=16%  Similarity=0.081  Sum_probs=126.1

Q ss_pred             chhHHHHHHHHHHHHHhCCC-CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.++.+++++|++.++ ++|||+|| .++|+.....+   ++|+.      +..+.+.|+.+|..+|.+++.++.+
T Consensus        99 ~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS-~~vyg~~~~~~---~~e~~------~~~~~~~Y~~sK~~~e~~~~~~~~~  168 (345)
T 2z1m_A           99 AEVDAIGVLRILEALRTVKPDTKFYQAST-SEMFGKVQEIP---QTEKT------PFYPRSPYAVAKLFGHWITVNYREA  168 (345)
T ss_dssp             HHHHTHHHHHHHHHHHHHCTTCEEEEEEE-GGGGCSCSSSS---BCTTS------CCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCceEEEEec-hhhcCCCCCCC---CCccC------CCCCCChhHHHHHHHHHHHHHHHHH
Confidence            57899999999999998887 89999999 68887665444   77876      4467889999999999999999888


Q ss_pred             cCCcEEEecCCceeCCCCCCCCh-hhHH-HHHHHHhCCcc--cc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-e
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTVN-ASII-HILKYLNGSAK--TY--ANSVQAYVHVRDVALAHILVYETPSASGRYLC-A  153 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~~-~~~~-~~~~~~~~~~~--~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~  153 (178)
                      .+++++++|++++|||+...... ..+. .+.+...+...  ..  +++.++|+|++|+|++++.+++.+. ++.||+ +
T Consensus       169 ~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~-~~~~~i~~  247 (345)
T 2z1m_A          169 YNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE-PDDYVIAT  247 (345)
T ss_dssp             HCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS-CCCEEECC
T ss_pred             hCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC-CceEEEeC
Confidence            89999999999999997543211 1122 22233445432  22  4567899999999999999998765 468876 6


Q ss_pred             cCccCHHHHHHHHHHhCCC
Q 030406          154 ESVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       154 ~~~~s~~e~~~~i~~~~~~  172 (178)
                      ++++|++|+++.+++.++.
T Consensus       248 ~~~~s~~e~~~~i~~~~g~  266 (345)
T 2z1m_A          248 GETHTVREFVEKAAKIAGF  266 (345)
T ss_dssp             SCCEEHHHHHHHHHHHTTC
T ss_pred             CCCccHHHHHHHHHHHhCC
Confidence            6789999999999998854

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.89  E-value=1.5e-22  Score=158.43  Aligned_cols=164  Identities=16%  Similarity=0.082  Sum_probs=119.1

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhh-----cccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFC-----KNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~-----~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.+|.+++++|++.++++|||+|| .++|+.....+   ++|+++.....+     ....+.|+.+|..+|.+++.
T Consensus       187 ~~~Nv~gt~~ll~aa~~~~~~~~V~iSS-~~v~~~~~~~~---~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~  262 (478)
T 4dqv_A          187 FGPNVAGTAELIRIALTTKLKPFTYVST-ADVGAAIEPSA---FTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLRE  262 (478)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCCCEEEEEE-GGGGTTSCTTT---CCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEee-hhhcCccCCCC---cCCcccccccCcccccccccccchHHHHHHHHHHHHH
Confidence            5789999999999999999999999999 57887654444   777763211100     01125599999999999999


Q ss_pred             HHHhcCCcEEEecCCceeCCCCC-C--CChhhHHHHH-HHHh-CCcccc----------CCCCcccccHHHHHHHHHHhh
Q 030406           77 EAVARGVDLVVVNPVLVLGPLLQ-S--TVNASIIHIL-KYLN-GSAKTY----------ANSVQAYVHVRDVALAHILVY  141 (178)
Q Consensus        77 ~~~~~~~~~~i~R~~~v~G~~~~-~--~~~~~~~~~~-~~~~-~~~~~~----------~~~~~~~i~v~D~a~~~~~~~  141 (178)
                      ++++.|++++++||++|||+... +  .....+..+. .... |..+..          +++.++|+|++|+|++++.++
T Consensus       263 ~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~  342 (478)
T 4dqv_A          263 ANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLG  342 (478)
T ss_dssp             HHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHH
T ss_pred             HHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHH
Confidence            98878999999999999998642 2  1112232222 2222 332221          156789999999999999998


Q ss_pred             cC----CC-CCCcEEE-ecCc--cCHHHHHHHHHHh
Q 030406          142 ET----PS-ASGRYLC-AESV--LHRGEVVEILAKF  169 (178)
Q Consensus       142 ~~----~~-~~~~~~~-~~~~--~s~~e~~~~i~~~  169 (178)
                      ..    +. .++.||+ +++.  +|++|+++.+++.
T Consensus       343 ~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~  378 (478)
T 4dqv_A          343 ARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA  378 (478)
T ss_dssp             HTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred             hhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence            75    33 3448987 4555  9999999999985

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.89  E-value=1.1e-22  Score=150.15  Aligned_cols=154  Identities=18%  Similarity=0.135  Sum_probs=120.6

Q ss_pred             chhHHHHHHHHHHHHHhCCC--CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKV--RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~--~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      ++.|+.+|.+|++++++.+.  +++|++|| .++|+.....+   .+|++      +..+.+.|+..|...|....  ..
T Consensus        79 ~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss-~~vyg~~~~~~---~~E~~------p~~~~~~~~~~~~~~e~~~~--~~  146 (298)
T 4b4o_A           79 LGSRLETTQLLAKAITKAPQPPKAWVLVTG-VAYYQPSLTAE---YDEDS------PGGDFDFFSNLVTKWEAAAR--LP  146 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHCSSCCSEEEEEEE-GGGSCCCSSCC---BCTTC------CCSCSSHHHHHHHHHHHHHC--CS
T ss_pred             hhHHHHHHHHHHHHHHHhCCCceEEEEEee-eeeecCCCCCc---ccccC------CccccchhHHHHHHHHHHHH--hh
Confidence            46799999999999998754  56888899 68998766655   78886      45677888888888887543  34


Q ss_pred             hcCCcEEEecCCceeCCCCCCCChhhHHHHH-HHHhCCc--cccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecC
Q 030406           80 ARGVDLVVVNPVLVLGPLLQSTVNASIIHIL-KYLNGSA--KTYANSVQAYVHVRDVALAHILVYETPSASGRYLC-AES  155 (178)
Q Consensus        80 ~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~  155 (178)
                      ..+++++++||+.|||++..     .+..+. ....+..  ...|++.++|||++|+++++..+++.+...+.||+ +++
T Consensus       147 ~~~~~~~~~r~~~v~g~~~~-----~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~g~yn~~~~~  221 (298)
T 4b4o_A          147 GDSTRQVVVRSGVVLGRGGG-----AMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGVLNGVAPS  221 (298)
T ss_dssp             SSSSEEEEEEECEEECTTSH-----HHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred             ccCCceeeeeeeeEEcCCCC-----chhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCCCCCeEEEECCC
Confidence            66899999999999998631     222222 2333433  33467899999999999999999999888889986 678


Q ss_pred             ccCHHHHHHHHHHhCCC
Q 030406          156 VLHRGEVVEILAKFFPE  172 (178)
Q Consensus       156 ~~s~~e~~~~i~~~~~~  172 (178)
                      ++|++|+++.+++.+++
T Consensus       222 ~~t~~e~~~~ia~~lgr  238 (298)
T 4b4o_A          222 SATNAEFAQTFGAALGR  238 (298)
T ss_dssp             CCBHHHHHHHHHHHHTC
T ss_pred             ccCHHHHHHHHHHHhCc
Confidence            99999999999998853

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.89  E-value=1e-22  Score=153.02  Aligned_cols=164  Identities=18%  Similarity=0.173  Sum_probs=121.7

Q ss_pred             chhHHHHHHHHHHHHHhCCCC-EEEEeccccccccCCCCCC-------------CCccCCCCCCchhhhcccCchHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKVR-RVVFTSSIGAVYMDPNRSP-------------DDVVDESCWSDLEFCKNTKNWYCYGK   67 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~-~~i~~Ss~~~~~~~~~~~~-------------~~~~~E~~~~~~~~~~~~~~~Y~~sK   67 (178)
                      +++|+.++.+++++|++.+++ +|||+|| .++|+.....+             ...++|+.      +..+.+.|+.+|
T Consensus        97 ~~~nv~~~~~l~~a~~~~~~~~~iv~~SS-~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~------~~~~~~~Y~~sK  169 (347)
T 1orr_A           97 FEINVGGTLNLLEAVRQYNSNCNIIYSST-NKVYGDLEQYKYNETETRYTCVDKPNGYDEST------QLDFHSPYGCSK  169 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEEEEEEE-GGGGTTCTTSCEEECSSCEEETTCTTCBCTTS------CCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCceEEEecc-HHHhCCCCcCCcccccccccccccccCccccC------CCCCCCchHHHH
Confidence            578999999999999998886 9999999 67887543322             01134443      345788999999


Q ss_pred             HHHHHHHHHHHHhcCCcEEEecCCceeCCCCCCCCh-hhHH-HHHHHHhCC-----c-cc--cCCCCcccccHHHHHHHH
Q 030406           68 AVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVN-ASII-HILKYLNGS-----A-KT--YANSVQAYVHVRDVALAH  137 (178)
Q Consensus        68 ~~~E~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~-~~~~-~~~~~~~~~-----~-~~--~~~~~~~~i~v~D~a~~~  137 (178)
                      ..+|.+++.++.+.|++++++||+++||+....... ..+. .+...+.+.     + ..  .|++.++|+|++|+|+++
T Consensus       170 ~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~  249 (347)
T 1orr_A          170 GAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLY  249 (347)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHH
Confidence            999999999988889999999999999997543211 1222 223333333     2 12  356789999999999999


Q ss_pred             HHhhcC-CC-CCCcEEEecC---ccCHHHHHHHHHHhCCC
Q 030406          138 ILVYET-PS-ASGRYLCAES---VLHRGEVVEILAKFFPE  172 (178)
Q Consensus       138 ~~~~~~-~~-~~~~~~~~~~---~~s~~e~~~~i~~~~~~  172 (178)
                      +.+++. +. .+..|++++.   ++|++|+++.+++.++.
T Consensus       250 ~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~  289 (347)
T 1orr_A          250 FTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNI  289 (347)
T ss_dssp             HHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTC
T ss_pred             HHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCC
Confidence            999985 22 3448888543   49999999999998853

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.89  E-value=2.4e-22  Score=153.00  Aligned_cols=159  Identities=12%  Similarity=0.067  Sum_probs=125.7

Q ss_pred             chhHHHHHHHHHHHHHhCCCC-----EEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKVR-----RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~-----~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.+++++|++.+++     +|||+|| .++|+.... +   ++|++      +..|.+.|+.+|..+|.+++.
T Consensus       130 ~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS-~~vyg~~~~-~---~~E~~------~~~~~~~Y~~sK~~~E~~~~~  198 (381)
T 1n7h_A          130 ADVVATGALRLLEAVRSHTIDSGRTVKYYQAGS-SEMFGSTPP-P---QSETT------PFHPRSPYAASKCAAHWYTVN  198 (381)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEE-GGGGTTSCS-S---BCTTS------CCCCCSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCccCCccEEEEeCc-HHHhCCCCC-C---CCCCC------CCCCCCchHHHHHHHHHHHHH
Confidence            578999999999999987765     9999999 688876543 3   88876      446788999999999999999


Q ss_pred             HHHhcCCcEEEecCCceeCCCCCCCCh-hhHH-HHHHHHhCCcc--cc--CCCCcccccHHHHHHHHHHhhcCCCCCCcE
Q 030406           77 EAVARGVDLVVVNPVLVLGPLLQSTVN-ASII-HILKYLNGSAK--TY--ANSVQAYVHVRDVALAHILVYETPSASGRY  150 (178)
Q Consensus        77 ~~~~~~~~~~i~R~~~v~G~~~~~~~~-~~~~-~~~~~~~~~~~--~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~  150 (178)
                      ++.+++++++++|++++|||+...... ..+. .+.....+...  ..  +++.++|+|++|+|++++.+++.+. ++.|
T Consensus       199 ~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~  277 (381)
T 1n7h_A          199 YREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEK-PDDY  277 (381)
T ss_dssp             HHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSS-CCEE
T ss_pred             HHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCCC-CCeE
Confidence            988889999999999999997543221 1122 23344455432  22  4678999999999999999998765 4788


Q ss_pred             EE-ecCccCHHHHHHHHHHhCCC
Q 030406          151 LC-AESVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       151 ~~-~~~~~s~~e~~~~i~~~~~~  172 (178)
                      ++ +++++|++|+++.+++.++.
T Consensus       278 ~i~~~~~~s~~e~~~~i~~~~g~  300 (381)
T 1n7h_A          278 VVATEEGHTVEEFLDVSFGYLGL  300 (381)
T ss_dssp             EECCSCEEEHHHHHHHHHHHTTC
T ss_pred             EeeCCCCCcHHHHHHHHHHHcCC
Confidence            76 56789999999999998854

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.89  E-value=1.5e-22  Score=153.69  Aligned_cols=145  Identities=17%  Similarity=0.083  Sum_probs=119.6

Q ss_pred             chhHHHHHHHHHHHHHhCCCC-EEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVR-RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~-~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.++.+++++|++.+++ +|||+|| ..+|+                        .+.|+.+|..+|++++.++++
T Consensus        66 ~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss-~~~~~------------------------~~~Y~~sK~~~E~~~~~~~~~  120 (369)
T 3st7_A           66 SLGNVSYLDHVLDILTRNTKKPAILLSSS-IQATQ------------------------DNPYGESKLQGEQLLREYAEE  120 (369)
T ss_dssp             SSSCCBHHHHHHHHHTTCSSCCEEEEEEE-GGGGS------------------------CSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEeCc-hhhcC------------------------CCCchHHHHHHHHHHHHHHHH
Confidence            568999999999999999987 9999999 46653                        467999999999999999988


Q ss_pred             cCCcEEEecCCceeCCCCCCCChhhHHHHHHH-HhCCcccc--CCCCcccccHHHHHHHHHHhhcCCCC--CCcEEE-ec
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTVNASIIHILKY-LNGSAKTY--ANSVQAYVHVRDVALAHILVYETPSA--SGRYLC-AE  154 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~~~~-~~  154 (178)
                      .+++++++||+++||++..+.....+..+... ..+.....  +++.++++|++|+|++++.+++.+..  ++.|++ ++
T Consensus       121 ~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~  200 (369)
T 3st7_A          121 YGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNV  200 (369)
T ss_dssp             HCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSCC
T ss_pred             hCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCCC
Confidence            89999999999999998665444455555544 44444332  56789999999999999999999877  568876 56


Q ss_pred             CccCHHHHHHHHHHhCC
Q 030406          155 SVLHRGEVVEILAKFFP  171 (178)
Q Consensus       155 ~~~s~~e~~~~i~~~~~  171 (178)
                      +.+|+.|+++.+++.++
T Consensus       201 ~~~s~~e~~~~~~~~~g  217 (369)
T 3st7_A          201 FKVTLGEIVDLLYKFKQ  217 (369)
T ss_dssp             EEEEHHHHHHHHHHHHH
T ss_pred             CceeHHHHHHHHHHHhC
Confidence            79999999999998653

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.89  E-value=2.6e-22  Score=147.67  Aligned_cols=150  Identities=15%  Similarity=0.135  Sum_probs=118.9

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++ +|||+|| .++|+.....+   ++|++      +..|.+.|+.+|..+|.+++.+.   
T Consensus        87 ~~~nv~~~~~l~~a~~~~~~-~iv~~SS-~~v~~~~~~~~---~~E~~------~~~~~~~Y~~sK~~~E~~~~~~~---  152 (292)
T 1vl0_A           87 YKINAIGPKNLAAAAYSVGA-EIVQIST-DYVFDGEAKEP---ITEFD------EVNPQSAYGKTKLEGENFVKALN---  152 (292)
T ss_dssp             HHHHTHHHHHHHHHHHHHTC-EEEEEEE-GGGSCSCCSSC---BCTTS------CCCCCSHHHHHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHHHHHHHHcCC-eEEEech-HHeECCCCCCC---CCCCC------CCCCccHHHHHHHHHHHHHHhhC---
Confidence            57899999999999999887 9999999 57887654334   88886      44678899999999999998763   


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHH-HHHhCCcc-ccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecCccC
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHIL-KYLNGSAK-TYANSVQAYVHVRDVALAHILVYETPSASGRYLC-AESVLH  158 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~~~s  158 (178)
                       .+++++||+.+||+ ...    .+..+. ....+... ..+++.++++|++|+|++++.+++.+ .++.|++ +++++|
T Consensus       153 -~~~~~lR~~~v~G~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~-~~~~~~i~~~~~~s  225 (292)
T 1vl0_A          153 -PKYYIVRTAWLYGD-GNN----FVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK-NYGTFHCTCKGICS  225 (292)
T ss_dssp             -SSEEEEEECSEESS-SSC----HHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT-CCEEEECCCBSCEE
T ss_pred             -CCeEEEeeeeeeCC-CcC----hHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC-CCcEEEecCCCCcc
Confidence             47999999999998 221    233333 33344442 34678899999999999999999876 5668886 567899


Q ss_pred             HHHHHHHHHHhCCC
Q 030406          159 RGEVVEILAKFFPE  172 (178)
Q Consensus       159 ~~e~~~~i~~~~~~  172 (178)
                      +.|+++.+++.++.
T Consensus       226 ~~e~~~~i~~~~g~  239 (292)
T 1vl0_A          226 WYDFAVEIFRLTGI  239 (292)
T ss_dssp             HHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHhCC
Confidence            99999999998753

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.88  E-value=3.4e-22  Score=148.53  Aligned_cols=154  Identities=19%  Similarity=0.181  Sum_probs=115.3

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++ +|||+|| .++|+. ...+   ++|++      +..|.+.|+.+|..+|.+++.+    
T Consensus        84 ~~~n~~~~~~l~~a~~~~~~-~~v~~SS-~~v~~~-~~~~---~~E~~------~~~~~~~Y~~sK~~~e~~~~~~----  147 (315)
T 2ydy_A           84 SQLNVDASGNLAKEAAAVGA-FLIYISS-DYVFDG-TNPP---YREED------IPAPLNLYGKTKLDGEKAVLEN----  147 (315)
T ss_dssp             ----CHHHHHHHHHHHHHTC-EEEEEEE-GGGSCS-SSCS---BCTTS------CCCCCSHHHHHHHHHHHHHHHH----
T ss_pred             HHHHHHHHHHHHHHHHHcCC-eEEEEch-HHHcCC-CCCC---CCCCC------CCCCcCHHHHHHHHHHHHHHHh----
Confidence            57899999999999999886 9999999 577765 2333   88886      4467889999999999999875    


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHH-H-hCCcc-ccCCCCcccccHHHHHHHHHHhhcCC----CCCCcEEE-e
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKY-L-NGSAK-TYANSVQAYVHVRDVALAHILVYETP----SASGRYLC-A  153 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~-~-~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~----~~~~~~~~-~  153 (178)
                      +++++++||+.+||+...... ..+..+... . .+... ..+++.++++|++|+|++++.+++.+    ..++.|++ +
T Consensus       148 ~~~~~~lR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~  226 (315)
T 2ydy_A          148 NLGAAVLRIPILYGEVEKLEE-SAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSG  226 (315)
T ss_dssp             CTTCEEEEECSEECSCSSGGG-STTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCC
T ss_pred             CCCeEEEeeeeeeCCCCcccc-cHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcC
Confidence            468899999999998765211 112222233 3 34432 34678899999999999999988753    44668886 5


Q ss_pred             cCccCHHHHHHHHHHhCCC
Q 030406          154 ESVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       154 ~~~~s~~e~~~~i~~~~~~  172 (178)
                      ++++|+.|+++.+++.++.
T Consensus       227 ~~~~s~~e~~~~i~~~~g~  245 (315)
T 2ydy_A          227 NEQMTKYEMACAIADAFNL  245 (315)
T ss_dssp             SCCBCHHHHHHHHHHHTTC
T ss_pred             CCcccHHHHHHHHHHHhCC
Confidence            6889999999999998854

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.88  E-value=5.8e-22  Score=160.60  Aligned_cols=165  Identities=18%  Similarity=0.230  Sum_probs=125.5

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhh-cccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFC-KNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~-~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.++.+++++|++.+ ++|||+|| .++|+.....+   ++|+++.....+ ..|.+.|+.+|..+|.+++.++++
T Consensus       406 ~~~Nv~gt~~ll~aa~~~~-~r~V~~SS-~~vyg~~~~~~---~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~  480 (660)
T 1z7e_A          406 FELDFEENLRIIRYCVKYR-KRIIFPST-SEVYGMCSDKY---FDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK  480 (660)
T ss_dssp             HHHHTHHHHHHHHHHHHTT-CEEEEECC-GGGGBTCCSSS---BCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhhhHHHHHHHHHHHHhC-CEEEEEec-HHHcCCCCCcc---cCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHH
Confidence            4689999999999999988 99999999 67887654433   788875321111 246678999999999999998888


Q ss_pred             cCCcEEEecCCceeCCCCCCC------ChhhHH-HHHHHHhCCcc-c--cCCCCcccccHHHHHHHHHHhhcCCC---CC
Q 030406           81 RGVDLVVVNPVLVLGPLLQST------VNASII-HILKYLNGSAK-T--YANSVQAYVHVRDVALAHILVYETPS---AS  147 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~------~~~~~~-~~~~~~~~~~~-~--~~~~~~~~i~v~D~a~~~~~~~~~~~---~~  147 (178)
                      .|++++++||+++||+.....      ....+. .+.....+... .  .+++.++|+|++|+|++++.+++.+.   .+
T Consensus       481 ~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g  560 (660)
T 1z7e_A          481 EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDG  560 (660)
T ss_dssp             HCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTT
T ss_pred             cCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCC
Confidence            899999999999999975421      011222 33345556553 2  24678999999999999999998764   34


Q ss_pred             CcEEEec-C-ccCHHHHHHHHHHhCC
Q 030406          148 GRYLCAE-S-VLHRGEVVEILAKFFP  171 (178)
Q Consensus       148 ~~~~~~~-~-~~s~~e~~~~i~~~~~  171 (178)
                      +.|++++ + ++|+.|+++.+.+.++
T Consensus       561 ~~~ni~~~~~~~s~~el~~~i~~~~g  586 (660)
T 1z7e_A          561 EIINIGNPENEASIEELGEMLLASFE  586 (660)
T ss_dssp             EEEEECCGGGEEEHHHHHHHHHHHHH
T ss_pred             eEEEECCCCCCcCHHHHHHHHHHHhc
Confidence            5888754 4 7999999999988763

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.88  E-value=6.2e-22  Score=148.66  Aligned_cols=160  Identities=19%  Similarity=0.061  Sum_probs=123.7

Q ss_pred             chhHHHHHHHHHHHHHhCC-----CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAK-----VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~-----~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.+++++|++.+     +++|||+|| .++|+.....+   ++|++      +..|.+.|+.+|..+|.+++.
T Consensus       109 ~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS-~~~~~~~~~~~---~~E~~------~~~~~~~Y~~sK~~~e~~~~~  178 (342)
T 2hrz_A          109 YRINLDGTRYLFDAIRIANGKDGYKPRVVFTSS-IAVFGAPLPYP---IPDEF------HTTPLTSYGTQKAICELLLSD  178 (342)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEE-GGGCCSSCCSS---BCTTC------CCCCSSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccccCCCcEEEEeCc-hHhhCCCCCCC---cCCCC------CCCCcchHHHHHHHHHHHHHH
Confidence            5789999999999999876     899999999 57887543333   88887      446788999999999999999


Q ss_pred             HHHhcCCcEEEecCCceeC-CCCCCCC-hhhHHHH-HHHHhCCccc---cCCCCcccccHHHHHHHHHHhhcCCC----C
Q 030406           77 EAVARGVDLVVVNPVLVLG-PLLQSTV-NASIIHI-LKYLNGSAKT---YANSVQAYVHVRDVALAHILVYETPS----A  146 (178)
Q Consensus        77 ~~~~~~~~~~i~R~~~v~G-~~~~~~~-~~~~~~~-~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~~~~----~  146 (178)
                      ++.+++++.+++|++.+|| |+..... ...+..+ .....+....   .++...+++|++|+|++++.+++.+.    .
T Consensus       179 ~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~  258 (342)
T 2hrz_A          179 YSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGP  258 (342)
T ss_dssp             HHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCS
T ss_pred             HHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhccccccCC
Confidence            9888889999999999998 5532211 1233333 3444555422   23456778999999999999998763    3


Q ss_pred             CCcEEEecCccCHHHHHHHHHHhCC
Q 030406          147 SGRYLCAESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       147 ~~~~~~~~~~~s~~e~~~~i~~~~~  171 (178)
                      ++.||++++.+|++|+++.+++.++
T Consensus       259 ~~~~ni~g~~~s~~e~~~~i~~~~g  283 (342)
T 2hrz_A          259 RRNLSMPGLSATVGEQIEALRKVAG  283 (342)
T ss_dssp             CCEEECCCEEEEHHHHHHHHHHHHC
T ss_pred             ccEEEcCCCCCCHHHHHHHHHHHcC
Confidence            5588887778999999999998774

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.88  E-value=1.9e-21  Score=150.26  Aligned_cols=160  Identities=16%  Similarity=0.098  Sum_probs=122.6

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCC--CCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPN--RSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~--~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.+++++|++ ++++|||+||. .+ |...  .....+++|+++..   +..+.+.|+.+|+.+|.+++.+. 
T Consensus       171 ~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~-~~-G~~~~~~~~~~~~~E~~~~~---~~~~~~~Y~~sK~~~E~~~~~~~-  243 (427)
T 4f6c_A          171 EKVNVQGTVDVIRLAQQ-HHARLIYVSTI-SV-GTYFDIDTEDVTFSEADVYK---GQLLTSPYTRSKFYSELKVLEAV-  243 (427)
T ss_dssp             HHHHHHHHHHHHHHHHH-TTCEEEEEEEG-GG-GSEECSSCSCCEECTTCSCS---SCCCCSHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHHh-cCCcEEEECch-Hh-CCCccCCCCCcccccccccc---CCCCCCchHHHHHHHHHHHHHHH-
Confidence            57899999999999999 78999999995 55 4321  11233488887432   13488999999999999999975 


Q ss_pred             hcCCcEEEecCCceeCCCCCCCCh-----hhHHH-HHHHHhCCcccc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEE
Q 030406           80 ARGVDLVVVNPVLVLGPLLQSTVN-----ASIIH-ILKYLNGSAKTY--ANSVQAYVHVRDVALAHILVYETPSASGRYL  151 (178)
Q Consensus        80 ~~~~~~~i~R~~~v~G~~~~~~~~-----~~~~~-~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~  151 (178)
                      +.|++++++||++|||+.......     ..+.. +.....+.....  ++..++|+|++|+|++++.++..+..+++|+
T Consensus       244 ~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~~g~~~~  323 (427)
T 4f6c_A          244 NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNTPQIIYH  323 (427)
T ss_dssp             HTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCCCCSEEE
T ss_pred             HcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCCCCCEEE
Confidence            468999999999999998654311     11333 333444444332  5789999999999999999999887666898


Q ss_pred             E-ecCccCHHHHHHHHHH
Q 030406          152 C-AESVLHRGEVVEILAK  168 (178)
Q Consensus       152 ~-~~~~~s~~e~~~~i~~  168 (178)
                      + +++++++.|+++.+++
T Consensus       324 l~~~~~~s~~el~~~i~~  341 (427)
T 4f6c_A          324 VLSPNKMPVKSLLECVKR  341 (427)
T ss_dssp             ESCSCCEEHHHHHHHHHS
T ss_pred             ecCCCCCcHHHHHHHHHH
Confidence            7 6788999999999997

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.88  E-value=9.6e-22  Score=147.14  Aligned_cols=152  Identities=20%  Similarity=0.262  Sum_probs=117.5

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+..... ..+++|++        .+.+.|+.+|..+|.+++.+    
T Consensus       109 ~~~N~~~~~~l~~a~~~~~~~~iV~~SS-~~~~~~~~~~-~~~~~E~~--------~~~~~Y~~sK~~~e~~~~~~----  174 (330)
T 2pzm_A          109 AATNVQGSINVAKAASKAGVKRLLNFQT-ALCYGRPATV-PIPIDSPT--------APFTSYGISKTAGEAFLMMS----  174 (330)
T ss_dssp             HHHHTHHHHHHHHHHHHHTCSEEEEEEE-GGGGCSCSSS-SBCTTCCC--------CCCSHHHHHHHHHHHHHHTC----
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEecC-HHHhCCCccC-CCCcCCCC--------CCCChHHHHHHHHHHHHHHc----
Confidence            4689999999999999989999999999 5778654322 01277764        46789999999999998765    


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHH-HHHHhCCccccCCC-CcccccHHHHHH-HHHHhhcCCCCCCcEEE-ecCcc
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHI-LKYLNGSAKTYANS-VQAYVHVRDVAL-AHILVYETPSASGRYLC-AESVL  157 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~i~v~D~a~-~~~~~~~~~~~~~~~~~-~~~~~  157 (178)
                      +++++++||+++|||+...   ..+..+ .....+. ..+++. .++++|++|+|+ +++.+++.+. ++.|++ +++++
T Consensus       175 ~~~~~~iR~~~v~gp~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~Dva~~a~~~~~~~~~-g~~~~v~~~~~~  249 (330)
T 2pzm_A          175 DVPVVSLRLANVTGPRLAI---GPIPTFYKRLKAGQ-KCFCSDTVRDFLDMSDFLAIADLSLQEGRP-TGVFNVSTGEGH  249 (330)
T ss_dssp             SSCEEEEEECEEECTTCCS---SHHHHHHHHHHTTC-CCCEESCEECEEEHHHHHHHHHHHTSTTCC-CEEEEESCSCCE
T ss_pred             CCCEEEEeeeeeECcCCCC---CHHHHHHHHHHcCC-EEeCCCCEecceeHHHHHHHHHHHHhhcCC-CCEEEeCCCCCC
Confidence            7999999999999998521   223333 3334444 333322 789999999999 9999998865 668887 45789


Q ss_pred             CHHHHHHHHHHhCCC
Q 030406          158 HRGEVVEILAKFFPE  172 (178)
Q Consensus       158 s~~e~~~~i~~~~~~  172 (178)
                      |++|+++.+++.++.
T Consensus       250 s~~e~~~~i~~~~g~  264 (330)
T 2pzm_A          250 SIKEVFDVVLDYVGA  264 (330)
T ss_dssp             EHHHHHHHHHHHHTC
T ss_pred             CHHHHHHHHHHHhCC
Confidence            999999999998754

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.88  E-value=1.5e-21  Score=153.92  Aligned_cols=162  Identities=16%  Similarity=0.095  Sum_probs=122.6

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCC--CCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPN--RSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~--~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.+++++|++ +.++|||+||. ++ |...  .....+++|+++..   ...+.+.|+.+|+.+|++++.+. 
T Consensus       252 ~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~-~v-G~~~~~~~~~~~~~E~~~~~---~~~~~~~Y~~sK~~~E~~~~~~~-  324 (508)
T 4f6l_B          252 EKVNVQGTVDVIRLAQQ-HHARLIYVSTI-SV-GTYFDIDTEDVTFSEADVYK---GQLLTSPYTRSKFYSELKVLEAV-  324 (508)
T ss_dssp             HHHHHHHHHHHHHHHHT-TTCEEEEEEES-CT-TSEECTTCSCCEECTTCSCS---SBCCCSHHHHHHHHHHHHHHHHH-
T ss_pred             hhhHHHHHHHHHHHHHh-CCCcEEEeCCh-hh-ccCCccCCcCcccccccccc---cccCCCcHHHHHHHHHHHHHHHH-
Confidence            57899999999999999 77999999995 55 3211  12233488887532   13478999999999999999975 


Q ss_pred             hcCCcEEEecCCceeCCCCCCCCh-----hhHHHHH-HHHhCCcccc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEE
Q 030406           80 ARGVDLVVVNPVLVLGPLLQSTVN-----ASIIHIL-KYLNGSAKTY--ANSVQAYVHVRDVALAHILVYETPSASGRYL  151 (178)
Q Consensus        80 ~~~~~~~i~R~~~v~G~~~~~~~~-----~~~~~~~-~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~  151 (178)
                      +.|++++++||++|||+.......     ..+..+. ....+.....  +++.++|+|++|+|++++.++..+..+++||
T Consensus       325 ~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~~~~~~n  404 (508)
T 4f6l_B          325 NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNTPQIIYH  404 (508)
T ss_dssp             HTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCCSCSEEE
T ss_pred             HcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCCCCCEEE
Confidence            469999999999999997654311     1233333 3333333222  5789999999999999999998877666998


Q ss_pred             E-ecCccCHHHHHHHHHHhC
Q 030406          152 C-AESVLHRGEVVEILAKFF  170 (178)
Q Consensus       152 ~-~~~~~s~~e~~~~i~~~~  170 (178)
                      + +++++++.|+++.+++..
T Consensus       405 l~~~~~~s~~el~~~i~~~~  424 (508)
T 4f6l_B          405 VLSPNKMPVKSLLECVKRKE  424 (508)
T ss_dssp             ESCSCEEEHHHHHHHHHSSC
T ss_pred             eCCCCCCCHHHHHHHHHHcC
Confidence            6 667899999999999754

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.87  E-value=1.5e-21  Score=138.74  Aligned_cols=141  Identities=17%  Similarity=0.121  Sum_probs=105.4

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++|||+||.+++++.+..     ..|+.      +..|.+.|+.+|..+|.+++.+.++.
T Consensus        85 ~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~-----~~~~~------~~~p~~~Y~~sK~~~e~~~~~~~~~~  153 (227)
T 3dhn_A           85 YDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGL-----RLMDS------GEVPENILPGVKALGEFYLNFLMKEK  153 (227)
T ss_dssp             CSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTE-----EGGGT------TCSCGGGHHHHHHHHHHHHHTGGGCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCC-----ccccC------CcchHHHHHHHHHHHHHHHHHHhhcc
Confidence            67899999999999999999999999996445443221     23332      34678899999999999999888788


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC-cEEE-ecCccCH
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLC-AESVLHR  159 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~-~~~~~s~  159 (178)
                      +++++++||+++||+........        ..+..+......++|+|++|+|++++.+++.+...+ +|++ ++++.++
T Consensus       154 ~~~~~ilrp~~v~g~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~~  225 (227)
T 3dhn_A          154 EIDWVFFSPAADMRPGVRTGRYR--------LGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHHHH  225 (227)
T ss_dssp             SSEEEEEECCSEEESCCCCCCCE--------EESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSCCC-
T ss_pred             CccEEEEeCCcccCCCcccccee--------ecCCCcccCCCCCcEEeHHHHHHHHHHHHhCccccCcEEEEEeehhccc
Confidence            99999999999999875432100        112223333334899999999999999999988665 8865 6777777


Q ss_pred             HH
Q 030406          160 GE  161 (178)
Q Consensus       160 ~e  161 (178)
                      ++
T Consensus       226 ~~  227 (227)
T 3dhn_A          226 HH  227 (227)
T ss_dssp             --
T ss_pred             CC
Confidence            53

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.87  E-value=3.3e-21  Score=144.37  Aligned_cols=148  Identities=20%  Similarity=0.273  Sum_probs=116.7

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEecccccccc----CCCCCCCCccCCCCCCchhhhcccC-chHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYM----DPNRSPDDVVDESCWSDLEFCKNTK-NWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~----~~~~~~~~~~~E~~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+    ....    +++|++        .|. +.|+.+|..+|.+++.
T Consensus       110 ~~~N~~~~~~l~~a~~~~~~~~iV~~SS-~~~~g~~~~~~~~----~~~E~~--------~p~~~~Y~~sK~~~E~~~~~  176 (333)
T 2q1w_A          110 TLTNCVGGSNVVQAAKKNNVGRFVYFQT-ALCYGVKPIQQPV----RLDHPR--------NPANSSYAISKSANEDYLEY  176 (333)
T ss_dssp             HHHHTHHHHHHHHHHHHTTCSEEEEEEE-GGGGCSCCCSSSB----CTTSCC--------CCTTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEECc-HHHhCCCcccCCC----CcCCCC--------CCCCCchHHHHHHHHHHHHh
Confidence            4689999999999999999999999999 67886    3322    377764        456 8999999999999987


Q ss_pred             -HHHhcCCcEEEecCCceeCCCCCCCChhhHHHHH-HHHhCCcccc-CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-
Q 030406           77 -EAVARGVDLVVVNPVLVLGPLLQSTVNASIIHIL-KYLNGSAKTY-ANSVQAYVHVRDVALAHILVYETPSASGRYLC-  152 (178)
Q Consensus        77 -~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-  152 (178)
                       +.     +++++||+++||++..   ...+..+. ....+. ..+ +++.++++|++|+|++++.+++.+. ++.|++ 
T Consensus       177 s~~-----~~~ilR~~~v~gp~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-g~~~~v~  246 (333)
T 2q1w_A          177 SGL-----DFVTFRLANVVGPRNV---SGPLPIFFQRLSEGK-KCFVTKARRDFVFVKDLARATVRAVDGVG-HGAYHFS  246 (333)
T ss_dssp             HTC-----CEEEEEESEEESTTCC---SSHHHHHHHHHHTTC-CCEEEECEECEEEHHHHHHHHHHHHTTCC-CEEEECS
T ss_pred             hhC-----CeEEEeeceEECcCCc---CcHHHHHHHHHHcCC-eeeCCCceEeeEEHHHHHHHHHHHHhcCC-CCEEEeC
Confidence             53     8999999999999832   12333333 334444 333 4678899999999999999998876 668887 


Q ss_pred             ecCccCHHHHHHHHHHhCCC
Q 030406          153 AESVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       153 ~~~~~s~~e~~~~i~~~~~~  172 (178)
                      +++.+|++|+++.+++.++.
T Consensus       247 ~~~~~s~~e~~~~i~~~~g~  266 (333)
T 2q1w_A          247 SGTDVAIKELYDAVVEAMAL  266 (333)
T ss_dssp             CSCCEEHHHHHHHHHHHTTC
T ss_pred             CCCCccHHHHHHHHHHHhCC
Confidence            56789999999999999854

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.86  E-value=3.5e-21  Score=156.97  Aligned_cols=163  Identities=18%  Similarity=0.186  Sum_probs=121.9

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCC-CCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNR-SPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~-~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+.... ....+++|++      +..|.+.|+.+|.++|++++.++.+
T Consensus       108 ~~~Nv~gt~~ll~a~~~~~~~~iV~~SS-~~vyg~~~~~~~~~~~~E~~------~~~p~~~Y~~sK~~~E~~~~~~~~~  180 (699)
T 1z45_A          108 YHNNILGTVVLLELMQQYNVSKFVFSSS-ATVYGDATRFPNMIPIPEEC------PLGPTNPYGHTKYAIENILNDLYNS  180 (699)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEE-GGGGCCGGGSTTCCSBCTTS------CCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEECc-HHHhCCCccccccCCccccC------CCCCCChHHHHHHHHHHHHHHHHHh
Confidence            5789999999999999989999999999 678864321 0012267765      4467889999999999999998776


Q ss_pred             --cCCcEEEecCCceeCCCCCCC--------ChhhHHHHHHHHhCC--c-ccc--------CCCCcccccHHHHHHHHHH
Q 030406           81 --RGVDLVVVNPVLVLGPLLQST--------VNASIIHILKYLNGS--A-KTY--------ANSVQAYVHVRDVALAHIL  139 (178)
Q Consensus        81 --~~~~~~i~R~~~v~G~~~~~~--------~~~~~~~~~~~~~~~--~-~~~--------~~~~~~~i~v~D~a~~~~~  139 (178)
                        .+++++++||+++||++....        ....+..+.....+.  . ..+        +++.++|||++|+|++++.
T Consensus       181 ~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~  260 (699)
T 1z45_A          181 DKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIA  260 (699)
T ss_dssp             STTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHH
T ss_pred             ccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHH
Confidence              689999999999999863210        112344455554432  2 222        4567899999999999999


Q ss_pred             hhcCC------C-CCCcEEE-ecCccCHHHHHHHHHHhCC
Q 030406          140 VYETP------S-ASGRYLC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       140 ~~~~~------~-~~~~~~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                      +++..      . .+++||+ +++.+|++|+++.+++.++
T Consensus       261 a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g  300 (699)
T 1z45_A          261 ALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASG  300 (699)
T ss_dssp             HHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHT
T ss_pred             HHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhC
Confidence            88642      1 2348887 6778999999999999874

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.85  E-value=7.3e-22  Score=155.94  Aligned_cols=153  Identities=15%  Similarity=0.102  Sum_probs=116.8

Q ss_pred             chhHHHHHHHHHHH-HHhCCCCEEEEecccccccc-CCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVA-AAEAKVRRVVFTSSIGAVYM-DPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~-~~~~~~~~~i~~Ss~~~~~~-~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.+|+++ +++.++++|||+|| .++|+ .....+   ++|+++       .+.+.|+.+|...|.++.. ..
T Consensus       226 ~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS-~~vyg~~~~~~~---~~E~~~-------~~~~~y~~~~~~~E~~~~~-~~  293 (516)
T 3oh8_A          226 RESRVLPTKFLAELVAESTQCTTMISASA-VGFYGHDRGDEI---LTEESE-------SGDDFLAEVCRDWEHATAP-AS  293 (516)
T ss_dssp             HHHTHHHHHHHHHHHHHCSSCCEEEEEEE-GGGGCSEEEEEE---ECTTSC-------CCSSHHHHHHHHHHHTTHH-HH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCEEEEeCc-ceEecCCCCCCc---cCCCCC-------CCcChHHHHHHHHHHHHHH-HH
Confidence            46799999999999 56678999999999 68887 332223   788863       2678899999999988765 45


Q ss_pred             hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHh-CCcc--ccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecC
Q 030406           80 ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLN-GSAK--TYANSVQAYVHVRDVALAHILVYETPSASGRYLC-AES  155 (178)
Q Consensus        80 ~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~  155 (178)
                      ..|++++++||+++||++.     ..+..+..... +...  ..+++.++|+|++|+|++++.+++.+...+.||+ +++
T Consensus       294 ~~gi~~~ilRp~~v~Gp~~-----~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~g~~ni~~~~  368 (516)
T 3oh8_A          294 DAGKRVAFIRTGVALSGRG-----GMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISGPINAVAPN  368 (516)
T ss_dssp             HTTCEEEEEEECEEEBTTB-----SHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred             hCCCCEEEEEeeEEECCCC-----ChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcccCCcEEEECCC
Confidence            6799999999999999873     12333333222 2222  2356789999999999999999998877788876 678


Q ss_pred             ccCHHHHHHHHHHhCC
Q 030406          156 VLHRGEVVEILAKFFP  171 (178)
Q Consensus       156 ~~s~~e~~~~i~~~~~  171 (178)
                      .+|++|+++.+++.++
T Consensus       369 ~~s~~el~~~i~~~~g  384 (516)
T 3oh8_A          369 PVSNADMTKILATSMH  384 (516)
T ss_dssp             CEEHHHHHHHTTC---
T ss_pred             CCCHHHHHHHHHHHhC
Confidence            9999999999998774

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.84  E-value=2.4e-20  Score=140.41  Aligned_cols=140  Identities=14%  Similarity=0.099  Sum_probs=111.8

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh-
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA-   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-   80 (178)
                      +++|+.|+.+++++|++.++++||++||. ..+                       .|.+.|+.+|..+|.+++.+..+ 
T Consensus       115 ~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~-~~~-----------------------~p~~~Y~~sK~~~E~~~~~~~~~~  170 (344)
T 2gn4_A          115 IKTNIMGASNVINACLKNAISQVIALSTD-KAA-----------------------NPINLYGATKLCSDKLFVSANNFK  170 (344)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCSEEEEECCG-GGS-----------------------SCCSHHHHHHHHHHHHHHHGGGCC
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEecCC-ccC-----------------------CCccHHHHHHHHHHHHHHHHHHHh
Confidence            57899999999999999999999999994 322                       24578999999999999987653 


Q ss_pred             --cCCcEEEecCCceeCCCCCCCChhhHHHHHH-HHhCC-cc-c-cCCCCcccccHHHHHHHHHHhhcCCCCCCcEEEec
Q 030406           81 --RGVDLVVVNPVLVLGPLLQSTVNASIIHILK-YLNGS-AK-T-YANSVQAYVHVRDVALAHILVYETPSASGRYLCAE  154 (178)
Q Consensus        81 --~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~-~~~~~-~~-~-~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~  154 (178)
                        .|++++++||+++||+...     .+..+.+ ...|. .. . .++..++|+|++|+|++++.+++.+..+..|++++
T Consensus       171 ~~~g~~~~~vRpg~v~g~~~~-----~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~~~g~~~~~~~  245 (344)
T 2gn4_A          171 GSSQTQFSVVRYGNVVGSRGS-----VVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKI  245 (344)
T ss_dssp             CSSCCEEEEECCCEETTCTTS-----HHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHCCSSCEEEECC
T ss_pred             CCCCcEEEEEEeccEECCCCC-----HHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhccCCCEEecCC
Confidence              5799999999999998632     2333333 33454 32 2 25667899999999999999998875556888877


Q ss_pred             CccCHHHHHHHHHHhC
Q 030406          155 SVLHRGEVVEILAKFF  170 (178)
Q Consensus       155 ~~~s~~e~~~~i~~~~  170 (178)
                      ..+++.|+++.+.+.+
T Consensus       246 ~~~s~~el~~~i~~~~  261 (344)
T 2gn4_A          246 PSMKMTDLAKALAPNT  261 (344)
T ss_dssp             CEEEHHHHHHHHCTTC
T ss_pred             CcEEHHHHHHHHHHhC
Confidence            7899999999998765

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.83  E-value=1.2e-19  Score=137.05  Aligned_cols=159  Identities=17%  Similarity=0.133  Sum_probs=116.6

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEE-------EeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVV-------FTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEK   72 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i-------~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~   72 (178)
                      +++|+.++.+++++|++.  +++++|       |+|| .++|+.... ...+++|+++..     .+.+.|    ..+|+
T Consensus        91 ~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss-~~vyg~~~~-~~~~~~E~~~~~-----~~~~~y----~~~E~  159 (364)
T 2v6g_A           91 CEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGP-FESYGKIES-HDPPYTEDLPRL-----KYMNFY----YDLED  159 (364)
T ss_dssp             HHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCC-GGGTTTSCC-CCSSBCTTSCCC-----SSCCHH----HHHHH
T ss_pred             HHHhHHHHHHHHHHHHHhccccceEEeccCceEEEec-hhhcccccc-CCCCCCccccCC-----ccchhh----HHHHH
Confidence            578999999999999998  899998       7999 578875421 112378876321     125667    45899


Q ss_pred             HHHHHHHhcC-CcEEEecCCceeCCCCCCCChhhHHH-HHHHH---hCCccc-cC-----CCCcccccHHHHHHHHHHhh
Q 030406           73 AAWEEAVARG-VDLVVVNPVLVLGPLLQSTVNASIIH-ILKYL---NGSAKT-YA-----NSVQAYVHVRDVALAHILVY  141 (178)
Q Consensus        73 ~~~~~~~~~~-~~~~i~R~~~v~G~~~~~~~~~~~~~-~~~~~---~~~~~~-~~-----~~~~~~i~v~D~a~~~~~~~  141 (178)
                      +++++.++++ ++++++||+++||++........... +.+.+   .+.... .+     ....+++|++|+|++++.++
T Consensus       160 ~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~  239 (364)
T 2v6g_A          160 IMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAA  239 (364)
T ss_dssp             HHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHH
T ss_pred             HHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHH
Confidence            9999887777 99999999999999865432222222 23333   455433 33     34578899999999999999


Q ss_pred             cCCCC-CCcEEE-ecCccCHHHHHHHHHHhCC
Q 030406          142 ETPSA-SGRYLC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       142 ~~~~~-~~~~~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                      +.+.. ++.||+ +++++|++|+++.+++.++
T Consensus       240 ~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g  271 (364)
T 2v6g_A          240 VDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFG  271 (364)
T ss_dssp             HCGGGTTEEEEECCSCCBCHHHHHHHHHHHHT
T ss_pred             hCCCCCCceEEecCCCcCCHHHHHHHHHHHhC
Confidence            88754 448987 4568999999999999875

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.82  E-value=5.4e-20  Score=130.09  Aligned_cols=133  Identities=17%  Similarity=0.123  Sum_probs=106.0

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++|||+||. ..++..   +   ..| .      +..|.+.|+.+|..+|++++   +..
T Consensus        79 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS~-~~~~~~---~---~~e-~------~~~~~~~Y~~sK~~~e~~~~---~~~  141 (219)
T 3dqp_A           79 LKVDLYGAVKLMQAAEKAEVKRFILLSTI-FSLQPE---K---WIG-A------GFDALKDYYIAKHFADLYLT---KET  141 (219)
T ss_dssp             CCCCCHHHHHHHHHHHHTTCCEEEEECCT-TTTCGG---G---CCS-H------HHHHTHHHHHHHHHHHHHHH---HSC
T ss_pred             EeEeHHHHHHHHHHHHHhCCCEEEEECcc-cccCCC---c---ccc-c------ccccccHHHHHHHHHHHHHH---hcc
Confidence            67899999999999999999999999994 444211   1   344 1      45688999999999999986   467


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC-cEEEecCccCHH
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCAESVLHRG  160 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~~~s~~  160 (178)
                      +++++++||+.+||+...+..                ..++..+++++++|+|++++.+++.+...+ .|+++++..+++
T Consensus       142 ~i~~~ilrp~~v~g~~~~~~~----------------~~~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~~~~~  205 (219)
T 3dqp_A          142 NLDYTIIQPGALTEEEATGLI----------------DINDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGKTAIK  205 (219)
T ss_dssp             CCEEEEEEECSEECSCCCSEE----------------EESSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECSEEHH
T ss_pred             CCcEEEEeCceEecCCCCCcc----------------ccCCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCCccHH
Confidence            999999999999998643321                124678999999999999999999876544 888866679999


Q ss_pred             HHHHHHH
Q 030406          161 EVVEILA  167 (178)
Q Consensus       161 e~~~~i~  167 (178)
                      |+.+.-.
T Consensus       206 e~~~~~~  212 (219)
T 3dqp_A          206 EALESLL  212 (219)
T ss_dssp             HHHHTTT
T ss_pred             HHHHHHH
Confidence            9887543

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.82  E-value=1.7e-19  Score=131.29  Aligned_cols=145  Identities=16%  Similarity=0.151  Sum_probs=112.3

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++ +|||+|| .++|+....    +++|++      +..|.+.|+.+|..+|.+++.     
T Consensus        81 ~~~n~~~~~~l~~~~~~~~~-~iv~~SS-~~~~~~~~~----~~~e~~------~~~~~~~Y~~sK~~~e~~~~~-----  143 (273)
T 2ggs_A           81 YKINAEAVRHIVRAGKVIDS-YIVHIST-DYVFDGEKG----NYKEED------IPNPINYYGLSKLLGETFALQ-----  143 (273)
T ss_dssp             HHHHTHHHHHHHHHHHHTTC-EEEEEEE-GGGSCSSSC----SBCTTS------CCCCSSHHHHHHHHHHHHHCC-----
T ss_pred             HHHhHHHHHHHHHHHHHhCC-eEEEEec-ceeEcCCCC----CcCCCC------CCCCCCHHHHHHHHHHHHHhC-----
Confidence            57899999999999999886 8999999 566754322    378876      446788999999999999765     


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHH-HHHhCCc-cccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEEecCccCH
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHIL-KYLNGSA-KTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHR  159 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~  159 (178)
                       ++++++||+.+||+.      .....+. ....+.. ...++ .++++|++|+|++++.+++.+. .+.|+++++.+|+
T Consensus       144 -~~~~~iR~~~v~G~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i~~~~~~~~-~g~~~i~~~~~s~  214 (273)
T 2ggs_A          144 -DDSLIIRTSGIFRNK------GFPIYVYKTLKEGKTVFAFKG-YYSPISARKLASAILELLELRK-TGIIHVAGERISR  214 (273)
T ss_dssp             -TTCEEEEECCCBSSS------SHHHHHHHHHHTTCCEEEESC-EECCCBHHHHHHHHHHHHHHTC-CEEEECCCCCEEH
T ss_pred             -CCeEEEecccccccc------HHHHHHHHHHHcCCCEEeecC-CCCceEHHHHHHHHHHHHhcCc-CCeEEECCCcccH
Confidence             678999999999821      1223332 3334443 23355 7899999999999999998764 5588875588999


Q ss_pred             HHHHHHHHHhCCC
Q 030406          160 GEVVEILAKFFPE  172 (178)
Q Consensus       160 ~e~~~~i~~~~~~  172 (178)
                      +|+++.+++.++.
T Consensus       215 ~e~~~~~~~~~g~  227 (273)
T 2ggs_A          215 FELALKIKEKFNL  227 (273)
T ss_dssp             HHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999999853

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.78  E-value=1.8e-18  Score=125.87  Aligned_cols=131  Identities=15%  Similarity=0.040  Sum_probs=104.0

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.|+.+++++|++.++++|||+||. ++|+....  ..+++|+.      +..+.+.|+.+|..+|.+++.++.++
T Consensus        84 ~~~N~~g~~~l~~a~~~~~~~~iv~~SS~-~~~g~~~~--~~~~~e~~------~~~~~~~Y~~sK~~~e~~~~~~a~~~  154 (267)
T 3rft_A           84 LQGNIIGLYNLYEAARAHGQPRIVFASSN-HTIGYYPQ--TERLGPDV------PARPDGLYGVSKCFGENLARMYFDKF  154 (267)
T ss_dssp             HHHHTHHHHHHHHHHHHTTCCEEEEEEEG-GGGTTSBT--TSCBCTTS------CCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEEcch-HHhCCCCC--CCCCCCCC------CCCCCChHHHHHHHHHHHHHHHHHHh
Confidence            57899999999999999999999999994 66653221  12377776      55788999999999999999999899


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC-cE-EEecCccCH
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RY-LCAESVLHR  159 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~-~~~~~~~s~  159 (178)
                      +++++++||+.++|+...                     ++..++|++++|+++++..+++.+..++ .+ ++++++.++
T Consensus       155 g~~~~~vr~~~v~~~~~~---------------------~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~~~~~  213 (267)
T 3rft_A          155 GQETALVRIGSCTPEPNN---------------------YRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASANDAGW  213 (267)
T ss_dssp             CCCEEEEEECBCSSSCCS---------------------TTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCCTTCC
T ss_pred             CCeEEEEEeecccCCCCC---------------------CCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCCCCCc
Confidence            999999999999986322                     2345678999999999999999887665 44 456666555


Q ss_pred             HHH
Q 030406          160 GEV  162 (178)
Q Consensus       160 ~e~  162 (178)
                      .++
T Consensus       214 ~~~  216 (267)
T 3rft_A          214 WDN  216 (267)
T ss_dssp             BCC
T ss_pred             ccC
Confidence            444

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.77  E-value=4e-18  Score=124.91  Aligned_cols=134  Identities=15%  Similarity=0.126  Sum_probs=103.1

Q ss_pred             hhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcC
Q 030406            3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG   82 (178)
Q Consensus         3 ~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~   82 (178)
                      ++|+.++.+++++|++.++++|||+||. ++++                       ....|+.+|..+|+++++    .|
T Consensus        81 ~~n~~~~~~l~~a~~~~~~~~~v~~Ss~-~~~~-----------------------~~~~y~~~K~~~E~~~~~----~~  132 (287)
T 2jl1_A           81 TLLIVQHANVVKAARDAGVKHIAYTGYA-FAEE-----------------------SIIPLAHVHLATEYAIRT----TN  132 (287)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSEEEEEEET-TGGG-----------------------CCSTHHHHHHHHHHHHHH----TT
T ss_pred             hHHHHHHHHHHHHHHHcCCCEEEEECCC-CCCC-----------------------CCCchHHHHHHHHHHHHH----cC
Confidence            3599999999999999999999999994 4431                       013699999999999863    58


Q ss_pred             CcEEEecCCceeCCCCCCCChhhHHHHHHHH-hCCcc-ccCCCCcccccHHHHHHHHHHhhcCCCCCC-cEEEe-cCccC
Q 030406           83 VDLVVVNPVLVLGPLLQSTVNASIIHILKYL-NGSAK-TYANSVQAYVHVRDVALAHILVYETPSASG-RYLCA-ESVLH  158 (178)
Q Consensus        83 ~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~-~~~~s  158 (178)
                      ++++++||+.++|+....    .+   ...+ .+... ..+++.++|+|++|+|++++.+++.+...+ .|+++ ++.+|
T Consensus       133 ~~~~ilrp~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s  205 (287)
T 2jl1_A          133 IPYTFLRNALYTDFFVNE----GL---RASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWT  205 (287)
T ss_dssp             CCEEEEEECCBHHHHSSG----GG---HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSSCBC
T ss_pred             CCeEEEECCEeccccchh----hH---HHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCCcCC
Confidence            999999999887754211    11   1222 23322 236788999999999999999998865444 88874 56899


Q ss_pred             HHHHHHHHHHhCC
Q 030406          159 RGEVVEILAKFFP  171 (178)
Q Consensus       159 ~~e~~~~i~~~~~  171 (178)
                      ++|+++.+++.++
T Consensus       206 ~~e~~~~i~~~~g  218 (287)
T 2jl1_A          206 FDELAQILSEVSG  218 (287)
T ss_dssp             HHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHC
Confidence            9999999999875

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.77  E-value=9.4e-19  Score=127.20  Aligned_cols=133  Identities=14%  Similarity=0.086  Sum_probs=104.7

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCC-CCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPN-RSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~-~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.++.+++++|++.++++|||+|| .++|+... ..+   ++|++      +..|.+.|+.+|..+|.+++.+..+
T Consensus        83 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS-~~~~~~~~~~~~---~~E~~------~~~~~~~Y~~sK~~~e~~~~~~~~~  152 (267)
T 3ay3_A           83 LQANIIGAYNLYEAARNLGKPRIVFASS-NHTIGYYPRTTR---IDTEV------PRRPDSLYGLSKCFGEDLASLYYHK  152 (267)
T ss_dssp             HHHTHHHHHHHHHHHHHTTCCEEEEEEE-GGGSTTSBTTSC---BCTTS------CCCCCSHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeCC-HHHhCCCCCCCC---CCCCC------CCCCCChHHHHHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999 57776432 223   78876      4467889999999999999998888


Q ss_pred             cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCC-CcEEE-ecCccC
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSAS-GRYLC-AESVLH  158 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~-~~~~~-~~~~~s  158 (178)
                      .+++++++||+++|+...                     .++..++|+|++|+|++++.+++.+..+ +.|+. ++...+
T Consensus       153 ~gi~~~~lrp~~v~~~~~---------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (267)
T 3ay3_A          153 FDIETLNIRIGSCFPKPK---------------------DARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASANTES  211 (267)
T ss_dssp             TCCCEEEEEECBCSSSCC---------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSCSSC
T ss_pred             cCCCEEEEeceeecCCCC---------------------CCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCCCcccc
Confidence            899999999999985321                     1123568999999999999999887654 35654 555666


Q ss_pred             HHHHHHH
Q 030406          159 RGEVVEI  165 (178)
Q Consensus       159 ~~e~~~~  165 (178)
                      +.|+.+.
T Consensus       212 ~~d~~~~  218 (267)
T 3ay3_A          212 WWDNDKS  218 (267)
T ss_dssp             CBCCGGG
T ss_pred             ccCHHHH
Confidence            6666555

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.77  E-value=1.2e-18  Score=124.42  Aligned_cols=131  Identities=16%  Similarity=0.166  Sum_probs=100.8

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++||++||. +.+.          .|..      + .+.+.|+.+|..+|.+++    +.
T Consensus       104 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS~-~~~~----------~~~~------~-~~~~~Y~~sK~~~e~~~~----~~  161 (236)
T 3e8x_A          104 ILIDLWGAIKTIQEAEKRGIKRFIMVSSV-GTVD----------PDQG------P-MNMRHYLVAKRLADDELK----RS  161 (236)
T ss_dssp             HHTTTHHHHHHHHHHHHHTCCEEEEECCT-TCSC----------GGGS------C-GGGHHHHHHHHHHHHHHH----HS
T ss_pred             chhhHHHHHHHHHHHHHcCCCEEEEEecC-CCCC----------CCCC------h-hhhhhHHHHHHHHHHHHH----HC
Confidence            57899999999999999999999999994 3221          1111      1 366889999999999876    56


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC-cEEEecCccCHH
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCAESVLHRG  160 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~~~s~~  160 (178)
                      |++++++||+.++|+.......             ....++..+++++++|+|++++.+++.+...+ .|++++..++++
T Consensus       162 gi~~~~lrpg~v~~~~~~~~~~-------------~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~~~~~~  228 (236)
T 3e8x_A          162 SLDYTIVRPGPLSNEESTGKVT-------------VSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNGDTPIA  228 (236)
T ss_dssp             SSEEEEEEECSEECSCCCSEEE-------------EESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEECSEEHH
T ss_pred             CCCEEEEeCCcccCCCCCCeEE-------------eccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCCCcCHH
Confidence            8999999999999986433210             01123457899999999999999999875444 888765579999


Q ss_pred             HHHHHHH
Q 030406          161 EVVEILA  167 (178)
Q Consensus       161 e~~~~i~  167 (178)
                      |+++.++
T Consensus       229 e~~~~i~  235 (236)
T 3e8x_A          229 KVVEQLG  235 (236)
T ss_dssp             HHHHTC-
T ss_pred             HHHHHhc
Confidence            9998765

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.76  E-value=2.5e-18  Score=121.37  Aligned_cols=142  Identities=13%  Similarity=0.178  Sum_probs=81.9

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH-h
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV-A   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~   80 (178)
                      .+.|+.++++++++|++.+++++|++||.+++|+.....+   ..|+.      +..|.+.|+.+|..+|.+. .+.+ .
T Consensus        76 ~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~---~~~~~------~~~~~~~y~~~k~~~e~~~-~~~~~~  145 (221)
T 3ew7_A           76 AEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNT---LLESK------GLREAPYYPTARAQAKQLE-HLKSHQ  145 (221)
T ss_dssp             TTSHHHHHHHHHHHHCSCCSSEEEEECCCC----------------------------CCCSCCHHHHHHHHH-HHHTTT
T ss_pred             cchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCcc---ccccC------CCCCHHHHHHHHHHHHHHH-HHHhhc
Confidence            3569999999999999999999999999767776543322   44443      4457788999999999973 3333 6


Q ss_pred             cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC-cEEE-ecCccC
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLC-AESVLH  158 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~-~~~~~s  158 (178)
                      .+++++++||+.+||+.....   ..    .. .+..........++++++|+|++++.+++.+...+ .|++ ++.+.+
T Consensus       146 ~gi~~~ivrp~~v~g~~~~~~---~~----~~-~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~  217 (221)
T 3ew7_A          146 AEFSWTYISPSAMFEPGERTG---DY----QI-GKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEHH  217 (221)
T ss_dssp             TTSCEEEEECSSCCCCC-----------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC-----
T ss_pred             cCccEEEEeCcceecCCCccC---ce----Ee-ccccceecCCCCceEeHHHHHHHHHHHHhCccccCCEEEECCCCccc
Confidence            799999999999999832111   00    11 11111222233479999999999999999987655 8876 455555


Q ss_pred             HHH
Q 030406          159 RGE  161 (178)
Q Consensus       159 ~~e  161 (178)
                      .+|
T Consensus       218 ~~~  220 (221)
T 3ew7_A          218 HHH  220 (221)
T ss_dssp             ---
T ss_pred             ccc
Confidence            443

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.76  E-value=1.5e-17  Score=117.72  Aligned_cols=140  Identities=13%  Similarity=0.083  Sum_probs=98.8

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      .++|+.++++++++|++.+ +++|++||.+++++.....+ ...+|..      ...|.+.|+.+|..+|.+ ..+.++.
T Consensus        79 ~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~-~~~~~~~------~~~~~~~y~~sK~~~e~~-~~~~~~~  149 (224)
T 3h2s_A           79 GYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHP-MILDFPE------SAASQPWYDGALYQYYEY-QFLQMNA  149 (224)
T ss_dssp             THHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSC-GGGGCCG------GGGGSTTHHHHHHHHHHH-HHHTTCT
T ss_pred             hhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCcc-ccccCCC------CCccchhhHHHHHHHHHH-HHHHhcC
Confidence            4679999999999999999 99999999766665443321 1234432      335688999999999954 5555677


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC-cEEE-ecCccCH
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLC-AESVLHR  159 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~-~~~~~s~  159 (178)
                      +++++++||+.+||+.......         ........++...++++++|+|++++.+++.+...+ .|++ +.++.++
T Consensus       150 ~i~~~ivrp~~v~g~~~~~~~~---------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~~~~~  220 (224)
T 3h2s_A          150 NVNWIGISPSEAFPSGPATSYV---------AGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDADLEHH  220 (224)
T ss_dssp             TSCEEEEEECSBCCCCCCCCEE---------EESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC----
T ss_pred             CCcEEEEcCccccCCCcccCce---------ecccccccCCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCcchhc
Confidence            9999999999999984322100         111222335667899999999999999999987655 8875 4444443

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.72  E-value=1.1e-17  Score=120.24  Aligned_cols=142  Identities=18%  Similarity=0.055  Sum_probs=101.0

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++||++||. +.+.           +..+.    .....+.|+.+|..+|.+++.    .
T Consensus       106 ~~~n~~~~~~l~~~~~~~~~~~iv~~SS~-~~~~-----------~~~~~----~~~~~~~y~~sK~~~e~~~~~----~  165 (253)
T 1xq6_A          106 EQVDWIGQKNQIDAAKVAGVKHIVVVGSM-GGTN-----------PDHPL----NKLGNGNILVWKRKAEQYLAD----S  165 (253)
T ss_dssp             HHHTTHHHHHHHHHHHHHTCSEEEEEEET-TTTC-----------TTCGG----GGGGGCCHHHHHHHHHHHHHT----S
T ss_pred             eeeeHHHHHHHHHHHHHcCCCEEEEEcCc-cCCC-----------CCCcc----ccccchhHHHHHHHHHHHHHh----C
Confidence            47899999999999999899999999994 4331           11100    011224588899999998753    6


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCC-CcEEEec----Cc
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSAS-GRYLCAE----SV  156 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~-~~~~~~~----~~  156 (178)
                      +++++++||+.++|+.....  ..       ..+..........+++|++|+|++++.+++.+... ..|++++    ++
T Consensus       166 ~i~~~~vrpg~v~~~~~~~~--~~-------~~~~~~~~~~~~~~~~~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~  236 (253)
T 1xq6_A          166 GTPYTIIRAGGLLDKEGGVR--EL-------LVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTS  236 (253)
T ss_dssp             SSCEEEEEECEEECSCSSSS--CE-------EEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTS
T ss_pred             CCceEEEecceeecCCcchh--hh-------hccCCcCCcCCCCcEEcHHHHHHHHHHHHcCccccCCEEEecCCCcCCC
Confidence            89999999999999864321  00       01111111123467999999999999999887544 4787643    35


Q ss_pred             cCHHHHHHHHHHhCCC
Q 030406          157 LHRGEVVEILAKFFPE  172 (178)
Q Consensus       157 ~s~~e~~~~i~~~~~~  172 (178)
                      +|++|+++.+++.+++
T Consensus       237 ~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          237 TPTKDFKALFSQVTSR  252 (253)
T ss_dssp             CCCCCHHHHHHTCCCC
T ss_pred             CCHHHHHHHHHHHhCC
Confidence            9999999999998753

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.71  E-value=4.5e-17  Score=119.18  Aligned_cols=132  Identities=20%  Similarity=0.092  Sum_probs=98.2

Q ss_pred             hHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcCC
Q 030406            4 PAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGV   83 (178)
Q Consensus         4 ~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~   83 (178)
                      .|+.++++++++|++.++++|||+||. ++|.                       ....|+.+|..+|+++++    .++
T Consensus        79 ~~~~~~~~l~~a~~~~~~~~~v~~Ss~-~~~~-----------------------~~~~y~~sK~~~e~~~~~----~~~  130 (286)
T 2zcu_A           79 QRAPQHRNVINAAKAAGVKFIAYTSLL-HADT-----------------------SPLGLADEHIETEKMLAD----SGI  130 (286)
T ss_dssp             ---CHHHHHHHHHHHHTCCEEEEEEET-TTTT-----------------------CCSTTHHHHHHHHHHHHH----HCS
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEECCC-CCCC-----------------------CcchhHHHHHHHHHHHHH----cCC
Confidence            478899999999999999999999994 4431                       013699999999999864    489


Q ss_pred             cEEEecCCceeCCCCCCCChhhHHHHHHHHh-CCcc-ccCCCCcccccHHHHHHHHHHhhcCCCC-CCcEEEe-cCccCH
Q 030406           84 DLVVVNPVLVLGPLLQSTVNASIIHILKYLN-GSAK-TYANSVQAYVHVRDVALAHILVYETPSA-SGRYLCA-ESVLHR  159 (178)
Q Consensus        84 ~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~~~~-~~~~s~  159 (178)
                      +++++||+.++++..     ..   +.+... +... ..+++.++++|++|+|++++.+++.+.. ++.|+++ ++.+|+
T Consensus       131 ~~~ilrp~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~  202 (286)
T 2zcu_A          131 VYTLLRNGWYSENYL-----AS---APAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTL  202 (286)
T ss_dssp             EEEEEEECCBHHHHH-----TT---HHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSCBCH
T ss_pred             CeEEEeChHHhhhhH-----HH---hHHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCCcCCH
Confidence            999999987655321     11   122222 2222 2256789999999999999999988654 4588875 568999


Q ss_pred             HHHHHHHHHhCC
Q 030406          160 GEVVEILAKFFP  171 (178)
Q Consensus       160 ~e~~~~i~~~~~  171 (178)
                      +|+++.+++.++
T Consensus       203 ~e~~~~i~~~~g  214 (286)
T 2zcu_A          203 TQLAAELTKQSG  214 (286)
T ss_dssp             HHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHC
Confidence            999999999875

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.71  E-value=1.7e-17  Score=116.69  Aligned_cols=122  Identities=17%  Similarity=0.093  Sum_probs=90.2

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++||++|| ..+|+                      .+.+.|+.+|..+|++++.    .
T Consensus        87 ~~~n~~~~~~l~~~~~~~~~~~~v~~Ss-~~~~~----------------------~~~~~y~~sK~~~e~~~~~----~  139 (215)
T 2a35_A           87 RAVDFDLPLAVGKRALEMGARHYLVVSA-LGADA----------------------KSSIFYNRVKGELEQALQE----Q  139 (215)
T ss_dssp             HHHHTHHHHHHHHHHHHTTCCEEEEECC-TTCCT----------------------TCSSHHHHHHHHHHHHHTT----S
T ss_pred             HHhhHHHHHHHHHHHHHcCCCEEEEECC-cccCC----------------------CCccHHHHHHHHHHHHHHH----c
Confidence            4789999999999999999999999999 45542                      1346899999999999764    4


Q ss_pred             CCc-EEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEEe-cCccC
Q 030406           82 GVD-LVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCA-ESVLH  158 (178)
Q Consensus        82 ~~~-~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s  158 (178)
                      +++ ++++||+.+||+.....   ..    ....+.....++..++++|++|+|++++.+++.+. ++.|+++ ++.++
T Consensus       140 ~~~~~~~vrp~~v~g~~~~~~---~~----~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~~~~i~~~~~~~  210 (215)
T 2a35_A          140 GWPQLTIARPSLLFGPREEFR---LA----EILAAPIARILPGKYHGIEACDLARALWRLALEEG-KGVRFVESDELRK  210 (215)
T ss_dssp             CCSEEEEEECCSEESTTSCEE---GG----GGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC-SEEEEEEHHHHHH
T ss_pred             CCCeEEEEeCceeeCCCCcch---HH----HHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcCC-CCceEEcHHHHHH
Confidence            899 99999999999875421   11    11111111223347799999999999999999875 6688775 44433

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.68  E-value=1.6e-16  Score=119.49  Aligned_cols=142  Identities=10%  Similarity=0.037  Sum_probs=103.7

Q ss_pred             hHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcC
Q 030406            4 PAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG   82 (178)
Q Consensus         4 ~nv~~t~~ll~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~   82 (178)
                      .|+.++.+++++|++.+ +++||+ |+    |+..       .+|..      +..|.+.|+.+|..+|+++++    .|
T Consensus        94 ~n~~~~~~l~~aa~~~g~v~~~v~-S~----~g~~-------~~e~~------~~~p~~~y~~sK~~~e~~l~~----~g  151 (346)
T 3i6i_A           94 ESILDQIALVKAMKAVGTIKRFLP-SE----FGHD-------VNRAD------PVEPGLNMYREKRRVRQLVEE----SG  151 (346)
T ss_dssp             GGGGGHHHHHHHHHHHCCCSEEEC-SC----CSSC-------TTTCC------CCTTHHHHHHHHHHHHHHHHH----TT
T ss_pred             hhHHHHHHHHHHHHHcCCceEEee-cc----cCCC-------CCccC------cCCCcchHHHHHHHHHHHHHH----cC
Confidence            48999999999999998 999996 43    2211       34443      335778899999999998875    58


Q ss_pred             CcEEEecCCceeCCCCCCCChhhHHHHHHH-HhCCcccc--CCCCcccccHHHHHHHHHHhhcCCCC-CCcEEEe--cCc
Q 030406           83 VDLVVVNPVLVLGPLLQSTVNASIIHILKY-LNGSAKTY--ANSVQAYVHVRDVALAHILVYETPSA-SGRYLCA--ESV  156 (178)
Q Consensus        83 ~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~~~~--~~~  156 (178)
                      ++++++||+.++|.......    ...... ..+.....  |+..++|+|++|+|++++.++..+.. ++.|++.  ++.
T Consensus       152 ~~~tivrpg~~~g~~~~~~~----~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~  227 (346)
T 3i6i_A          152 IPFTYICCNSIASWPYYNNI----HPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNC  227 (346)
T ss_dssp             CCBEEEECCEESSCCCSCC---------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGE
T ss_pred             CCEEEEEecccccccCcccc----ccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCC
Confidence            99999999999996533211    101011 11222223  56789999999999999999998765 3466653  589


Q ss_pred             cCHHHHHHHHHHhCC
Q 030406          157 LHRGEVVEILAKFFP  171 (178)
Q Consensus       157 ~s~~e~~~~i~~~~~  171 (178)
                      +|++|+++.+++.++
T Consensus       228 ~s~~e~~~~~~~~~g  242 (346)
T 3i6i_A          228 LNINELASVWEKKIG  242 (346)
T ss_dssp             ECHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHC
Confidence            999999999999874

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.67  E-value=5.2e-16  Score=113.82  Aligned_cols=135  Identities=17%  Similarity=0.205  Sum_probs=96.0

Q ss_pred             hhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcC
Q 030406            3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG   82 (178)
Q Consensus         3 ~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~   82 (178)
                      ..|+.++++++++|++.++++|||+||.+.    .         +..         + ..+...+..+|..+    ++.|
T Consensus        80 ~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~----~---------~~~---------~-~~~~~~~~~~e~~~----~~~g  132 (289)
T 3e48_A           80 FKRIPEVENLVYAAKQSGVAHIIFIGYYAD----Q---------HNN---------P-FHMSPYFGYASRLL----STSG  132 (289)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCEEEEEEESCC----S---------TTC---------C-STTHHHHHHHHHHH----HHHC
T ss_pred             hhhHHHHHHHHHHHHHcCCCEEEEEcccCC----C---------CCC---------C-CccchhHHHHHHHH----HHcC
Confidence            358999999999999999999999999421    1         110         0 00111122344443    3558


Q ss_pred             CcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCcc--ccCCCCcccccHHHHHHHHHHhhcCCCC-CCcEEEecCccCH
Q 030406           83 VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK--TYANSVQAYVHVRDVALAHILVYETPSA-SGRYLCAESVLHR  159 (178)
Q Consensus        83 ~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~~~~~~~~s~  159 (178)
                      ++++++||+.++|+.        ...+.....+...  ..+++.++|+|++|+|++++.++..+.. +..|+++++.+|+
T Consensus       133 ~~~~ilrp~~~~~~~--------~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~s~  204 (289)
T 3e48_A          133 IDYTYVRMAMYMDPL--------KPYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLSGYSYDM  204 (289)
T ss_dssp             CEEEEEEECEESTTH--------HHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEECCEEEEH
T ss_pred             CCEEEEecccccccc--------HHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeCCCcCCH
Confidence            999999999999863        1222233333332  2367889999999999999999998765 4588777889999


Q ss_pred             HHHHHHHHHhCCC
Q 030406          160 GEVVEILAKFFPE  172 (178)
Q Consensus       160 ~e~~~~i~~~~~~  172 (178)
                      .|+++.+++.++.
T Consensus       205 ~e~~~~~~~~~g~  217 (289)
T 3e48_A          205 KELAAILSEASGT  217 (289)
T ss_dssp             HHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHCC
Confidence            9999999998753

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.66  E-value=1.1e-16  Score=117.93  Aligned_cols=140  Identities=16%  Similarity=0.084  Sum_probs=104.9

Q ss_pred             hhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcC
Q 030406            3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG   82 (178)
Q Consensus         3 ~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~   82 (178)
                      +.|+.++++++++|++.++++||++|+ .++++.         ++.         .+...|+.+|..+|+++++    .|
T Consensus        89 ~~~~~~~~~~~~aa~~~gv~~iv~~S~-~~~~~~---------~~~---------~~~~~y~~sK~~~e~~~~~----~g  145 (299)
T 2wm3_A           89 EQEVKQGKLLADLARRLGLHYVVYSGL-ENIKKL---------TAG---------RLAAAHFDGKGEVEEYFRD----IG  145 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSEEEECCC-CCHHHH---------TTT---------SCCCHHHHHHHHHHHHHHH----HT
T ss_pred             hHHHHHHHHHHHHHHHcCCCEEEEEcC-cccccc---------CCC---------cccCchhhHHHHHHHHHHH----CC
Confidence            467889999999999999999999877 566642         111         1346799999999999875    38


Q ss_pred             CcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCc----cccCCCCcccccHHHHHHHHHHhhcCCC--CCCcEEEecCc
Q 030406           83 VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA----KTYANSVQAYVHVRDVALAHILVYETPS--ASGRYLCAESV  156 (178)
Q Consensus        83 ~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~~~~~  156 (178)
                      ++++++||+.+||+........      ....+..    ...++..++|+|++|+|++++.++..+.  .+..|+++++.
T Consensus       146 i~~~ilrp~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g~~  219 (299)
T 2wm3_A          146 VPMTSVRLPCYFENLLSHFLPQ------KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCR  219 (299)
T ss_dssp             CCEEEEECCEEGGGGGTTTCCE------ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCSEE
T ss_pred             CCEEEEeecHHhhhchhhcCCc------ccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeeecc
Confidence            9999999999999753211000      0112211    1126778999999999999999998752  34578887788


Q ss_pred             cCHHHHHHHHHHhCC
Q 030406          157 LHRGEVVEILAKFFP  171 (178)
Q Consensus       157 ~s~~e~~~~i~~~~~  171 (178)
                      +|+.|+++.+.+.++
T Consensus       220 ~s~~e~~~~~~~~~g  234 (299)
T 2wm3_A          220 HTAEEYAALLTKHTR  234 (299)
T ss_dssp             ECHHHHHHHHHHHHS
T ss_pred             CCHHHHHHHHHHHHC
Confidence            999999999999874

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.63  E-value=2.4e-16  Score=118.90  Aligned_cols=141  Identities=14%  Similarity=0.122  Sum_probs=101.8

Q ss_pred             hhHHHHHHHHHHHHHhCC-CCEEEEecccc-ccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            3 EPAVIGTKNVIVAAAEAK-VRRVVFTSSIG-AVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         3 ~~nv~~t~~ll~~~~~~~-~~~~i~~Ss~~-~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +.|+.+ ++++++|++.+ +++|||+||.+ ..|+           +          .+.+.|+.+|..+|+++++    
T Consensus        87 ~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~-----------~----------~~~~~y~~sK~~~E~~~~~----  140 (352)
T 1xgk_A           87 DEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYG-----------P----------WPAVPMWAPKFTVENYVRQ----  140 (352)
T ss_dssp             CHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTS-----------S----------CCCCTTTHHHHHHHHHHHT----
T ss_pred             HHHHHH-HHHHHHHHHcCCccEEEEeCCccccccC-----------C----------CCCccHHHHHHHHHHHHHH----
Confidence            347776 99999999998 99999999953 1221           1          1346799999999999875    


Q ss_pred             cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCc----cccCCCCcccccH-HHHHHHHHHhhcCCC---CCCcEEE
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA----KTYANSVQAYVHV-RDVALAHILVYETPS---ASGRYLC  152 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~v-~D~a~~~~~~~~~~~---~~~~~~~  152 (178)
                      .+++++++||+ +||+.........+. ......+..    +..+++.++++|+ +|+|++++.+++.+.   .++.|++
T Consensus       141 ~gi~~~ivrpg-~~g~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l  218 (352)
T 1xgk_A          141 LGLPSTFVYAG-IYNNNFTSLPYPLFQ-MELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIAL  218 (352)
T ss_dssp             SSSCEEEEEEC-EEGGGCBSSSCSSCB-EEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEE
T ss_pred             cCCCEEEEecc-eecCCchhccccccc-ccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEE
Confidence            38999999976 688764332111100 000112332    1225788999999 899999999998752   3568988


Q ss_pred             ecCccCHHHHHHHHHHhCC
Q 030406          153 AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       153 ~~~~~s~~e~~~~i~~~~~  171 (178)
                      +++.+|++|+++.+++.++
T Consensus       219 ~~~~~s~~e~~~~i~~~~G  237 (352)
T 1xgk_A          219 TFETLSPVQVCAAFSRALN  237 (352)
T ss_dssp             CSEEECHHHHHHHHHHHHT
T ss_pred             ecCCCCHHHHHHHHHHHHC
Confidence            7888999999999999874

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.56  E-value=8.3e-14  Score=96.95  Aligned_cols=116  Identities=17%  Similarity=0.178  Sum_probs=85.0

Q ss_pred             hhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcC
Q 030406            3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG   82 (178)
Q Consensus         3 ~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~   82 (178)
                      ++|+.++.+++++|++.++++||++|| .++|+.....+                .+.+.|+.+|..+|++++    +.+
T Consensus        85 ~~n~~~~~~~~~~~~~~~~~~~v~~Ss-~~~~~~~~~~~----------------~~~~~y~~~K~~~e~~~~----~~~  143 (206)
T 1hdo_A           85 TVMSEGARNIVAAMKAHGVDKVVACTS-AFLLWDPTKVP----------------PRLQAVTDDHIRMHKVLR----ESG  143 (206)
T ss_dssp             CHHHHHHHHHHHHHHHHTCCEEEEECC-GGGTSCTTCSC----------------GGGHHHHHHHHHHHHHHH----HTC
T ss_pred             chHHHHHHHHHHHHHHhCCCeEEEEee-eeeccCccccc----------------ccchhHHHHHHHHHHHHH----hCC
Confidence            579999999999999999999999999 46665321111                156789999999999985    458


Q ss_pred             CcEEEecCCceeCCCCC-CCChhhHHHHHHHHhCCccccCCCC-cccccHHHHHHHHHHhhcCCCCCC-cEEEec
Q 030406           83 VDLVVVNPVLVLGPLLQ-STVNASIIHILKYLNGSAKTYANSV-QAYVHVRDVALAHILVYETPSASG-RYLCAE  154 (178)
Q Consensus        83 ~~~~i~R~~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~  154 (178)
                      ++++++||+.+ ++... .....              ..+... .+++|++|+|++++.+++.+...+ .|++++
T Consensus       144 i~~~~lrp~~~-~~~~~~~~~~~--------------~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~  203 (206)
T 1hdo_A          144 LKYVAVMPPHI-GDQPLTGAYTV--------------TLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH  203 (206)
T ss_dssp             SEEEEECCSEE-ECCCCCSCCEE--------------ESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred             CCEEEEeCCcc-cCCCCCcceEe--------------cccCCCCCCccCHHHHHHHHHHHhcCccccccceeeec
Confidence            99999999997 33321 11000              001111 589999999999999999876544 777754

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.56  E-value=4.8e-14  Score=100.74  Aligned_cols=122  Identities=16%  Similarity=0.005  Sum_probs=88.9

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++||++||. +.|+                      .+.+.|+.+|...|.+++.    .
T Consensus       105 ~~~n~~~~~~~~~~~~~~~~~~iv~~SS~-~~~~----------------------~~~~~Y~~sK~~~e~~~~~----~  157 (242)
T 2bka_A          105 VRVDRDYVLKSAELAKAGGCKHFNLLSSK-GADK----------------------SSNFLYLQVKGEVEAKVEE----L  157 (242)
T ss_dssp             HHHHTHHHHHHHHHHHHTTCCEEEEECCT-TCCT----------------------TCSSHHHHHHHHHHHHHHT----T
T ss_pred             eeeeHHHHHHHHHHHHHCCCCEEEEEccC-cCCC----------------------CCcchHHHHHHHHHHHHHh----c
Confidence            56899999999999999999999999994 5542                      1235799999999998765    3


Q ss_pred             CC-cEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEEec
Q 030406           82 GV-DLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAE  154 (178)
Q Consensus        82 ~~-~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~  154 (178)
                      ++ +++++||+.++|+.....   ....+.....+..+... ....+++++|+|++++.++..+...+.+++++
T Consensus       158 ~~~~~~~vrpg~v~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~  227 (242)
T 2bka_A          158 KFDRYSVFRPGVLLCDRQESR---PGEWLVRKFFGSLPDSW-ASGHSVPVVTVVRAMLNNVVRPRDKQMELLEN  227 (242)
T ss_dssp             CCSEEEEEECCEEECTTGGGS---HHHHHHHHHHCSCCTTG-GGGTEEEHHHHHHHHHHHHTSCCCSSEEEEEH
T ss_pred             CCCCeEEEcCceecCCCCCCc---HHHHHHHHhhcccCccc-cCCcccCHHHHHHHHHHHHhCccccCeeEeeH
Confidence            67 599999999999864321   12222222222222111 12358999999999999999887777777654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.46  E-value=1.5e-13  Score=100.37  Aligned_cols=143  Identities=18%  Similarity=0.068  Sum_probs=93.9

Q ss_pred             chhHHHH----HHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIG----TKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~----t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|    ++.++..+++.+..+||++||.++..+                     ..+.+.|+.+|...|.+.+.+
T Consensus       107 ~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~l  165 (281)
T 3m1a_A          107 FELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLS---------------------FAGFSAYSATKAALEQLSEGL  165 (281)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC---------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCC---------------------CCCchHHHHHHHHHHHHHHHH
Confidence            5789999    556666666667789999999644321                     135678999999999999988


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCC-------ChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQST-------VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSAS  147 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~  147 (178)
                      +.+   .|+++.++|||.+.++.....       .........   .............+++++|+|++++.+++.+..+
T Consensus       166 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~~~  242 (281)
T 3m1a_A          166 ADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVG---PTRQLVQGSDGSQPGDPAKAAAAIRLALDTEKTP  242 (281)
T ss_dssp             HHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHH---HHHHHHHC-----CBCHHHHHHHHHHHHHSSSCC
T ss_pred             HHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhH---HHHHHHhhccCCCCCCHHHHHHHHHHHHhCCCCC
Confidence            777   789999999999977643211       011111111   1111111234567888999999999999998877


Q ss_pred             CcEEEec-CccCHHHHHHHHHH
Q 030406          148 GRYLCAE-SVLHRGEVVEILAK  168 (178)
Q Consensus       148 ~~~~~~~-~~~s~~e~~~~i~~  168 (178)
                      .+|++++ ....+.+....+.+
T Consensus       243 ~~~~l~s~~~~~i~g~~~~i~~  264 (281)
T 3m1a_A          243 LRLALGGDAVDFLTGHLDSVRA  264 (281)
T ss_dssp             SEEEESHHHHHHHHHHHHHHHH
T ss_pred             eEEecCchHHHHHHHHHHHHHH
Confidence            7888754 33444555554444

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.44  E-value=1.5e-12  Score=94.81  Aligned_cols=145  Identities=21%  Similarity=0.197  Sum_probs=100.4

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..+||++||. +.+...                   ..+...|+.+|...|.+++.+
T Consensus       122 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~-~~~~~~-------------------~~~~~~Y~~sK~a~~~~~~~l  181 (278)
T 2bgk_A          122 MDINVYGAFLVAKHAARVMIPAKKGSIVFTASI-SSFTAG-------------------EGVSHVYTATKHAVLGLTTSL  181 (278)
T ss_dssp             HHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCG-GGTCCC-------------------TTSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeec-cccCCC-------------------CCCCcchHHHHHHHHHHHHHH
Confidence            57899999999998875    356799999995 443211                   014567999999999999887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~  151 (178)
                      +.+   .|+++.++||+.++++....................    +.....+++++|+|++++.++..+  ...| .++
T Consensus       182 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  257 (278)
T 2bgk_A          182 CTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQA----ANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLV  257 (278)
T ss_dssp             HHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHT----CSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcc----cccccccCCHHHHHHHHHHHcCcccccCCCCEEE
Confidence            765   589999999999999864332111111111111111    122356899999999999998653  2334 666


Q ss_pred             E-ecCccCHHHHHHHHHHhC
Q 030406          152 C-AESVLHRGEVVEILAKFF  170 (178)
Q Consensus       152 ~-~~~~~s~~e~~~~i~~~~  170 (178)
                      + ++..+++.|+++.+++.+
T Consensus       258 v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          258 IDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             ESTTGGGCCTHHHHHSCSCC
T ss_pred             ECCcccccCCccchhhhhhc
Confidence            7 556899999999887644

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.43  E-value=1.2e-13  Score=99.33  Aligned_cols=150  Identities=23%  Similarity=0.119  Sum_probs=91.8

Q ss_pred             chhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCCccCCCCC-Cchh-------hhcccCchHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCW-SDLE-------FCKNTKNWYCYGKAV   69 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~-~~~~-------~~~~~~~~Y~~sK~~   69 (178)
                      +++|+.++.++++++.+.    +.+++|++||. +.++.....+  +..|... ....       ....+.+.|+.+|..
T Consensus        83 ~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a  159 (255)
T 2dkn_A           83 VAVNYFGVSALLDGLAEALSRGQQPAAVIVGSI-AATQPGAAEL--PMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYA  159 (255)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG-GGGSTTGGGC--HHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHhhhcCCceEEEEecc-cccccccccc--chhhhhcccchhhhhhhccccCCcchhHHHHHHH
Confidence            578999999999987653    56899999995 5553221100  0111000 0000       001356789999999


Q ss_pred             HHHHHHHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--
Q 030406           70 AEKAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--  144 (178)
Q Consensus        70 ~E~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--  144 (178)
                      .|.+++.++.+   .|++++++||+.++|+..........  ........   .+ ....+++++|+|++++.++..+  
T Consensus       160 ~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~--~~~~~~~~---~~-~~~~~~~~~dva~~~~~l~~~~~~  233 (255)
T 2dkn_A          160 VTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPR--YGESTRRF---VA-PLGRGSEPREVAEAIAFLLGPQAS  233 (255)
T ss_dssp             HHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTT--THHHHHSC---CC-TTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchh--hHHHHHHH---HH-HhcCCCCHHHHHHHHHHHhCCCcc
Confidence            99999987765   68999999999999864211000000  00001000   02 4457999999999999999875  


Q ss_pred             CCCC-cEEEec-CccCHH
Q 030406          145 SASG-RYLCAE-SVLHRG  160 (178)
Q Consensus       145 ~~~~-~~~~~~-~~~s~~  160 (178)
                      ...| .|++++ ..++++
T Consensus       234 ~~~G~~~~v~gg~~~~~~  251 (255)
T 2dkn_A          234 FIHGSVLFVDGGMDALMR  251 (255)
T ss_dssp             TCCSCEEEESTTHHHHHC
T ss_pred             cceeeEEEecCCeEeeee
Confidence            2334 677744 444443

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.42  E-value=4.8e-13  Score=93.33  Aligned_cols=108  Identities=17%  Similarity=0.083  Sum_probs=83.7

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh-
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA-   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-   80 (178)
                      +++|+.++.++++++++.+.++||++||. +.+.                    +..+.+.|+.+|...|.+++.++.+ 
T Consensus        94 ~~~n~~~~~~l~~~~~~~~~~~iv~~sS~-~~~~--------------------~~~~~~~Y~~sK~a~~~~~~~~~~~~  152 (207)
T 2yut_A           94 LAAHLLTAAFVLKHARFQKGARAVFFGAY-PRYV--------------------QVPGFAAYAAAKGALEAYLEAARKEL  152 (207)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEEEEECCC-HHHH--------------------SSTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHhcCCcEEEEEcCh-hhcc--------------------CCCCcchHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999977777899999995 4431                    1135578999999999999988766 


Q ss_pred             --cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCc
Q 030406           81 --RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGR  149 (178)
Q Consensus        81 --~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~  149 (178)
                        .|+++.++||+.++++....                   .+.....+++++|+|++++.+++.+..+..
T Consensus       153 ~~~gi~v~~v~pg~v~t~~~~~-------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~~~  204 (207)
T 2yut_A          153 LREGVHLVLVRLPAVATGLWAP-------------------LGGPPKGALSPEEAARKVLEGLFREPVPAL  204 (207)
T ss_dssp             HTTTCEEEEECCCCBCSGGGGG-------------------GTSCCTTCBCHHHHHHHHHHHHC--CCCSC
T ss_pred             hhhCCEEEEEecCcccCCCccc-------------------cCCCCCCCCCHHHHHHHHHHHHhCCCCccc
Confidence              58999999999998764110                   112347899999999999999988765543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.42  E-value=7e-14  Score=103.45  Aligned_cols=143  Identities=16%  Similarity=0.163  Sum_probs=96.0

Q ss_pred             hHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhccc-CchHHHHHHHHHHHHHHHHHhc
Q 030406            4 PAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT-KNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         4 ~nv~~t~~ll~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      .|+.++++++++|++.+ +++||+ |+    |+.....    . +.       +..| .+.| .+|..+|++++    +.
T Consensus        91 ~~~~~~~~l~~aa~~~g~v~~~v~-S~----~g~~~~~----~-~~-------~~~p~~~~y-~sK~~~e~~~~----~~  148 (313)
T 1qyd_A           91 HHILEQLKLVEAIKEAGNIKRFLP-SE----FGMDPDI----M-EH-------ALQPGSITF-IDKRKVRRAIE----AA  148 (313)
T ss_dssp             TTTTTHHHHHHHHHHSCCCSEEEC-SC----CSSCTTS----C-CC-------CCSSTTHHH-HHHHHHHHHHH----HT
T ss_pred             hhHHHHHHHHHHHHhcCCCceEEe-cC----CcCCccc----c-cc-------CCCCCcchH-HHHHHHHHHHH----hc
Confidence            37889999999999998 999996 43    2221110    1 11       1123 4568 99999999875    35


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCc-ccc--CCCCcccccHHHHHHHHHHhhcCCCC-CCcEE-Eec-C
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA-KTY--ANSVQAYVHVRDVALAHILVYETPSA-SGRYL-CAE-S  155 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~~-~~~-~  155 (178)
                      |++++++||+.++|.......... .  .....+.. ...  ++..++++|++|++++++.+++.+.. ++.|+ +++ +
T Consensus       149 g~~~~ilrp~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~  225 (313)
T 1qyd_A          149 SIPYTYVSSNMFAGYFAGSLAQLD-G--HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMN  225 (313)
T ss_dssp             TCCBCEEECCEEHHHHTTTSSCTT-C--CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGG
T ss_pred             CCCeEEEEeceecccccccccccc-c--cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCC
Confidence            899999999988874321110000 0  00011221 222  46789999999999999999988754 34555 444 6


Q ss_pred             ccCHHHHHHHHHHhCC
Q 030406          156 VLHRGEVVEILAKFFP  171 (178)
Q Consensus       156 ~~s~~e~~~~i~~~~~  171 (178)
                      .+|++|+++.+++.++
T Consensus       226 ~~s~~e~~~~~~~~~g  241 (313)
T 1qyd_A          226 ILSQKEVIQIWERLSE  241 (313)
T ss_dssp             EEEHHHHHHHHHHHHT
T ss_pred             ccCHHHHHHHHHHhcC
Confidence            8999999999999875

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.33  E-value=1.3e-12  Score=96.44  Aligned_cols=140  Identities=21%  Similarity=0.213  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhccc-CchHHHHHHHHHHHHHHHHHhcCC
Q 030406            6 VIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT-KNWYCYGKAVAEKAAWEEAVARGV   83 (178)
Q Consensus         6 v~~t~~ll~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~~~   83 (178)
                      +.++++++++|++++ +++||+ |+    |+..       .+|..      +..| .+.| .+|..+|+++++    .++
T Consensus        90 ~~~~~~l~~aa~~~g~v~~~v~-S~----~g~~-------~~~~~------~~~p~~~~y-~sK~~~e~~~~~----~~~  146 (308)
T 1qyc_A           90 IESQVNIIKAIKEVGTVKRFFP-SE----FGND-------VDNVH------AVEPAKSVF-EVKAKVRRAIEA----EGI  146 (308)
T ss_dssp             SGGGHHHHHHHHHHCCCSEEEC-SC----CSSC-------TTSCC------CCTTHHHHH-HHHHHHHHHHHH----HTC
T ss_pred             hhhHHHHHHHHHhcCCCceEee-cc----cccC-------ccccc------cCCcchhHH-HHHHHHHHHHHh----cCC
Confidence            567899999999988 999985 44    2211       12221      1123 3568 999999998864    479


Q ss_pred             cEEEecCCceeCCCCCCCChhhHHHHHHHHhCCc-cc--cCCCCcccccHHHHHHHHHHhhcCCCCCC-cEEE-e-cCcc
Q 030406           84 DLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA-KT--YANSVQAYVHVRDVALAHILVYETPSASG-RYLC-A-ESVL  157 (178)
Q Consensus        84 ~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~-~-~~~~  157 (178)
                      +++++||+.++|..........    .....+.. ..  .++..++|+|++|++++++.+++.+...+ .|++ + ++.+
T Consensus       147 ~~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~  222 (308)
T 1qyc_A          147 PYTYVSSNCFAGYFLRSLAQAG----LTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTL  222 (308)
T ss_dssp             CBEEEECCEEHHHHTTTTTCTT----CSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEE
T ss_pred             CeEEEEeceecccccccccccc----ccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCcc
Confidence            9999999998875322110000    00011111 22  24678999999999999999998865434 5554 4 4689


Q ss_pred             CHHHHHHHHHHhCCC
Q 030406          158 HRGEVVEILAKFFPE  172 (178)
Q Consensus       158 s~~e~~~~i~~~~~~  172 (178)
                      |++|+++.+++.+++
T Consensus       223 s~~e~~~~~~~~~g~  237 (308)
T 1qyc_A          223 SLNELVALWEKKIDK  237 (308)
T ss_dssp             EHHHHHHHHHHHTTS
T ss_pred             CHHHHHHHHHHHhCC
Confidence            999999999998853

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.31  E-value=3.9e-12  Score=93.79  Aligned_cols=139  Identities=19%  Similarity=0.150  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhccc-CchHHHHHHHHHHHHHHHHHhcCC
Q 030406            6 VIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT-KNWYCYGKAVAEKAAWEEAVARGV   83 (178)
Q Consensus         6 v~~t~~ll~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~~~   83 (178)
                      +.++++++++|++.+ +++||+ |+    |+..       .+|..      +..| .+.| .+|..+|++++.    .++
T Consensus        89 ~~~~~~l~~aa~~~g~v~~~v~-S~----~g~~-------~~~~~------~~~p~~~~y-~sK~~~e~~~~~----~~i  145 (307)
T 2gas_A           89 IEDQVKIIKAIKEAGNVKKFFP-SE----FGLD-------VDRHD------AVEPVRQVF-EEKASIRRVIEA----EGV  145 (307)
T ss_dssp             GGGHHHHHHHHHHHCCCSEEEC-SC----CSSC-------TTSCC------CCTTHHHHH-HHHHHHHHHHHH----HTC
T ss_pred             cccHHHHHHHHHhcCCceEEee-cc----cccC-------ccccc------CCCcchhHH-HHHHHHHHHHHH----cCC
Confidence            567899999999988 999984 33    2211       12221      1123 4578 999999998764    489


Q ss_pred             cEEEecCCceeCCCCCCCChhhHHHHHHHHhCCc-ccc--CCCCcccccHHHHHHHHHHhhcCCCCCC-cEE-Ee-cCcc
Q 030406           84 DLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA-KTY--ANSVQAYVHVRDVALAHILVYETPSASG-RYL-CA-ESVL  157 (178)
Q Consensus        84 ~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~-~~-~~~~  157 (178)
                      +++++||+.+++..........    .....+.. ...  ++..+++++++|+|++++.++..+...+ .|+ .+ ++.+
T Consensus       146 ~~~~lrp~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~  221 (307)
T 2gas_A          146 PYTYLCCHAFTGYFLRNLAQLD----ATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYL  221 (307)
T ss_dssp             CBEEEECCEETTTTGGGTTCTT----CSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEE
T ss_pred             CeEEEEcceeeccccccccccc----cccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcC
Confidence            9999999988875321110000    00001111 222  4567899999999999999998765434 454 44 4689


Q ss_pred             CHHHHHHHHHHhCC
Q 030406          158 HRGEVVEILAKFFP  171 (178)
Q Consensus       158 s~~e~~~~i~~~~~  171 (178)
                      |++|+++.+++.++
T Consensus       222 s~~e~~~~~~~~~g  235 (307)
T 2gas_A          222 TQNEVIALWEKKIG  235 (307)
T ss_dssp             EHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHhC
Confidence            99999999999874

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.31  E-value=2.5e-12  Score=95.47  Aligned_cols=135  Identities=13%  Similarity=0.078  Sum_probs=93.9

Q ss_pred             HHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhccc-CchHHHHHHHHHHHHHHHHHhcCC
Q 030406            6 VIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT-KNWYCYGKAVAEKAAWEEAVARGV   83 (178)
Q Consensus         6 v~~t~~ll~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~~~   83 (178)
                      +.++++++++|++.+ +++||+ |+    |+..       .+|..      +..| .+.| .+|..+|++++.    .++
T Consensus        90 ~~~~~~l~~aa~~~g~v~~~v~-S~----~g~~-------~~~~~------~~~p~~~~y-~sK~~~e~~~~~----~~~  146 (321)
T 3c1o_A           90 ISSQIHIINAIKAAGNIKRFLP-SD----FGCE-------EDRIK------PLPPFESVL-EKKRIIRRAIEA----AAL  146 (321)
T ss_dssp             SGGGHHHHHHHHHHCCCCEEEC-SC----CSSC-------GGGCC------CCHHHHHHH-HHHHHHHHHHHH----HTC
T ss_pred             hhhHHHHHHHHHHhCCccEEec-cc----cccC-------ccccc------cCCCcchHH-HHHHHHHHHHHH----cCC
Confidence            567899999999988 999983 33    2211       22222      1123 4679 999999998864    479


Q ss_pred             cEEEecCCceeCCCCCCCChhhHHHHHHH----HhCC-cccc--CCCCcccccHHHHHHHHHHhhcCCCCCC-cEEE-e-
Q 030406           84 DLVVVNPVLVLGPLLQSTVNASIIHILKY----LNGS-AKTY--ANSVQAYVHVRDVALAHILVYETPSASG-RYLC-A-  153 (178)
Q Consensus        84 ~~~i~R~~~v~G~~~~~~~~~~~~~~~~~----~~~~-~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~-~-  153 (178)
                      +++++||+.+++..        ...+...    ..+. ...+  ++..++++|++|+|++++.++..+...+ .|++ + 
T Consensus       147 ~~~~lrp~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~  218 (321)
T 3c1o_A          147 PYTYVSANCFGAYF--------VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPP  218 (321)
T ss_dssp             CBEEEECCEEHHHH--------HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCG
T ss_pred             CeEEEEeceecccc--------ccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCC
Confidence            99999999887642        1111110    1122 2222  4678899999999999999998875444 5554 4 


Q ss_pred             cCccCHHHHHHHHHHhCC
Q 030406          154 ESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       154 ~~~~s~~e~~~~i~~~~~  171 (178)
                      ++.+|++|+++.+++.++
T Consensus       219 ~~~~t~~e~~~~~~~~~g  236 (321)
T 3c1o_A          219 KNIISQNELISLWEAKSG  236 (321)
T ss_dssp             GGEEEHHHHHHHHHHHHT
T ss_pred             CCcccHHHHHHHHHHHcC
Confidence            478999999999999874

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.30  E-value=2.6e-12  Score=95.28  Aligned_cols=135  Identities=16%  Similarity=0.122  Sum_probs=92.8

Q ss_pred             HHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhccc-CchHHHHHHHHHHHHHHHHHhcCC
Q 030406            6 VIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNT-KNWYCYGKAVAEKAAWEEAVARGV   83 (178)
Q Consensus         6 v~~t~~ll~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~~~   83 (178)
                      +.++++++++|++.+ +++||+ |+    |+..       .+|..      +..| .+.| .+|..+|+++++    .++
T Consensus        92 ~~~~~~l~~aa~~~g~v~~~v~-S~----~g~~-------~~~~~------~~~p~~~~y-~sK~~~e~~~~~----~~~  148 (318)
T 2r6j_A           92 ILDQFKILEAIKVAGNIKRFLP-SD----FGVE-------EDRIN------ALPPFEALI-ERKRMIRRAIEE----ANI  148 (318)
T ss_dssp             STTHHHHHHHHHHHCCCCEEEC-SC----CSSC-------TTTCC------CCHHHHHHH-HHHHHHHHHHHH----TTC
T ss_pred             hHHHHHHHHHHHhcCCCCEEEe-ec----cccC-------ccccc------CCCCcchhH-HHHHHHHHHHHh----cCC
Confidence            567899999999988 999985 43    2211       12221      1123 3568 999999998764    589


Q ss_pred             cEEEecCCceeCCCCCCCChhhHHHHHHH-HhCCc-ccc--CCCCcccccHHHHHHHHHHhhcCCCCCC-cEE-Ee-cCc
Q 030406           84 DLVVVNPVLVLGPLLQSTVNASIIHILKY-LNGSA-KTY--ANSVQAYVHVRDVALAHILVYETPSASG-RYL-CA-ESV  156 (178)
Q Consensus        84 ~~~i~R~~~v~G~~~~~~~~~~~~~~~~~-~~~~~-~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~-~~-~~~  156 (178)
                      +++++||+.+++..        +..+... ..+.. ...  ++..++|+|++|++++++.+++.+...+ .|+ ++ ++.
T Consensus       149 ~~~~lr~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~  220 (318)
T 2r6j_A          149 PYTYVSANCFASYF--------INYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNI  220 (318)
T ss_dssp             CBEEEECCEEHHHH--------HHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGE
T ss_pred             CeEEEEcceehhhh--------hhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCc
Confidence            99999999876531        1112111 12222 122  4668999999999999999998765434 555 44 478


Q ss_pred             cCHHHHHHHHHHhCC
Q 030406          157 LHRGEVVEILAKFFP  171 (178)
Q Consensus       157 ~s~~e~~~~i~~~~~  171 (178)
                      +|++|+++.+++.++
T Consensus       221 ~s~~e~~~~~~~~~g  235 (318)
T 2r6j_A          221 ITQLELISRWEKKIG  235 (318)
T ss_dssp             EEHHHHHHHHHHHHT
T ss_pred             cCHHHHHHHHHHHhC
Confidence            999999999999874

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.27  E-value=1.4e-11  Score=90.79  Aligned_cols=142  Identities=13%  Similarity=-0.004  Sum_probs=93.4

Q ss_pred             chhHHHHHHHHHHHHHh-----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE-----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~-----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++.+     .+..++|++||..+..+                     ..+...|+.+|...|.+.+.
T Consensus       132 ~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~  190 (302)
T 1w6u_A          132 TDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG---------------------SGFVVPSASAKAGVEAMSKS  190 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC---------------------CTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC---------------------CCCcchhHHHHHHHHHHHHH
Confidence            57899999999888753     34579999999544332                     12456899999999999998


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cE
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RY  150 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~  150 (178)
                      ++.+   .|+++.++|||.++++..................+.      ....+++++|+|++++.++..+.  ..| .+
T Consensus       191 la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------p~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  264 (302)
T 1w6u_A          191 LAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRI------PCGRLGTVEELANLAAFLCSDYASWINGAVI  264 (302)
T ss_dssp             HHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTC------TTSSCBCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             HHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcC------CcCCCCCHHHHHHHHHHHcCCcccccCCCEE
Confidence            8776   689999999999988742221111100011122111      12357899999999999886532  234 66


Q ss_pred             EE-ecCccCHHHHHHHHHHhC
Q 030406          151 LC-AESVLHRGEVVEILAKFF  170 (178)
Q Consensus       151 ~~-~~~~~s~~e~~~~i~~~~  170 (178)
                      ++ ++..++++++++.+.+..
T Consensus       265 ~v~gg~~~~~~~~~~~~~~~~  285 (302)
T 1w6u_A          265 KFDGGEEVLISGEFNDLRKVT  285 (302)
T ss_dssp             EESTTHHHHHHSTTGGGGGCC
T ss_pred             EECCCeeeccCCccccchhhc
Confidence            77 455677777776665543

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.26  E-value=4.5e-11  Score=87.09  Aligned_cols=142  Identities=15%  Similarity=0.152  Sum_probs=85.0

Q ss_pred             chhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++...    + .++|++||.++.+..                    ..+...|+.+|...+.+.+.+
T Consensus       118 ~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~--------------------~~~~~~Y~~sK~a~~~~~~~l  176 (278)
T 1spx_A          118 LNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHA--------------------TPDFPYYSIAKAAIDQYTRNT  176 (278)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSC--------------------CTTSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccC--------------------CCCccHHHHHHHHHHHHHHHH
Confidence            578999999999888753    5 799999995331210                    123467999999999998887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCC--hhhH----HHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC---
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTV--NASI----IHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS---  145 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---  145 (178)
                      +.+   .|+++.++|||.+.++......  ....    ..........      ....+++++|+|++++.++..+.   
T Consensus       177 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~~~~~~~~dvA~~v~~l~s~~~~~~  250 (278)
T 1spx_A          177 AIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECV------PAGVMGQPQDIAEVIAFLADRKTSSY  250 (278)
T ss_dssp             HHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHC------TTSSCBCHHHHHHHHHHHHCHHHHTT
T ss_pred             HHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcC------CCcCCCCHHHHHHHHHHHcCccccCc
Confidence            654   5899999999999876432210  0000    0011111111      12347899999999999887532   


Q ss_pred             CCC-cEEE-ecCccCHHHHHHHHHHhC
Q 030406          146 ASG-RYLC-AESVLHRGEVVEILAKFF  170 (178)
Q Consensus       146 ~~~-~~~~-~~~~~s~~e~~~~i~~~~  170 (178)
                      ..| .+++ ++..+++.++++.+.+.+
T Consensus       251 ~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          251 IIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             CCSCEEEESTTGGGC------------
T ss_pred             ccCcEEEECCCcccccCcccccHHHHh
Confidence            345 5666 556899999999988754

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.24  E-value=1.8e-11  Score=85.00  Aligned_cols=111  Identities=14%  Similarity=0.040  Sum_probs=82.3

Q ss_pred             chhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.++++++.+.   + .++|++||..+..+                     ..+...|+.+|...|.+++.++
T Consensus        86 ~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~---------------------~~~~~~Y~~sK~~~~~~~~~~~  143 (202)
T 3d7l_A           86 ISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDP---------------------IVQGASAAMANGAVTAFAKSAA  143 (202)
T ss_dssp             HHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHHHHT
T ss_pred             HhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCC---------------------CCccHHHHHHHHHHHHHHHHHH
Confidence            468999999999999875   4 68999999533211                     1245789999999999999887


Q ss_pred             Hhc--CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEE
Q 030406           79 VAR--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLC  152 (178)
Q Consensus        79 ~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~  152 (178)
                      .+.  |+++.++||+.++++..            ..  +    .+...+++++++|+|++++.++.....+..|++
T Consensus       144 ~e~~~gi~v~~v~pg~v~~~~~------------~~--~----~~~~~~~~~~~~dva~~~~~~~~~~~~G~~~~v  201 (202)
T 3d7l_A          144 IEMPRGIRINTVSPNVLEESWD------------KL--E----PFFEGFLPVPAAKVARAFEKSVFGAQTGESYQV  201 (202)
T ss_dssp             TSCSTTCEEEEEEECCBGGGHH------------HH--G----GGSTTCCCBCHHHHHHHHHHHHHSCCCSCEEEE
T ss_pred             HHccCCeEEEEEecCccCCchh------------hh--h----hhccccCCCCHHHHHHHHHHhhhccccCceEec
Confidence            653  89999999999987631            11  0    012356789999999999988855434446654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.23  E-value=5.9e-11  Score=85.24  Aligned_cols=129  Identities=17%  Similarity=0.140  Sum_probs=88.1

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+.++||++||. +.+..                    ..+.+.|+.+|...|.+++.+
T Consensus       115 ~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~-~~~~~--------------------~~~~~~Y~~sK~a~~~~~~~~  173 (255)
T 1fmc_A          115 YELNVFSFFHLSQLVAPEMEKNGGGVILTITSM-AAENK--------------------NINMTSYASSKAAASHLVRNM  173 (255)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG-GGTCC--------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcch-hhcCC--------------------CCCCcccHHHHHHHHHHHHHH
Confidence            5789999999998885    4467899999995 43311                    124578999999999999887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+.   ++++.++||+.++++.........  .......+.      ....+++++|+|++++.++..+.  ..| .|+
T Consensus       174 ~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  245 (255)
T 1fmc_A          174 AFDLGEKNIRVNGIAPGAILTDALKSVITPE--IEQKMLQHT------PIRRLGQPQDIANAALFLCSPAASWVSGQILT  245 (255)
T ss_dssp             HHHHHTTTEEEEEEEECSBCSHHHHTTCCHH--HHHHHHHTC------SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhhhcCcEEEEEecccCcchhhhhccChH--HHHHHHhcC------CcccCCCHHHHHHHHHHHhCCccccCCCcEEE
Confidence            7654   899999999999986432211111  111222222      22457899999999999987542  234 777


Q ss_pred             Ee-cCccCH
Q 030406          152 CA-ESVLHR  159 (178)
Q Consensus       152 ~~-~~~~s~  159 (178)
                      ++ +..+|+
T Consensus       246 v~gg~~~s~  254 (255)
T 1fmc_A          246 VSGGGVQEL  254 (255)
T ss_dssp             ESTTSCCCC
T ss_pred             ECCceeccC
Confidence            74 455553

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.22  E-value=3.9e-11  Score=85.68  Aligned_cols=125  Identities=18%  Similarity=0.137  Sum_probs=85.5

Q ss_pred             chhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++.+.    + .++||++||. +.+..                    ..+...|+.+|...|.+++.
T Consensus       104 ~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~-~~~~~--------------------~~~~~~Y~~sK~a~~~~~~~  162 (244)
T 1cyd_A          104 FSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSM-VAHVT--------------------FPNLITYSSTKGAMTMLTKA  162 (244)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG-GGTSC--------------------CTTBHHHHHHHHHHHHHHHH
T ss_pred             HhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcch-hhcCC--------------------CCCcchhHHHHHHHHHHHHH
Confidence            578999999999888753    4 5799999995 43321                    12446799999999999998


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cE
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RY  150 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~  150 (178)
                      ++.+   .++++.++||+.++++...... .....+.....+      ...+++++++|+|++++.++..+.  ..| .+
T Consensus       163 ~a~~~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  235 (244)
T 1cyd_A          163 MAMELGPHKIRVNSVNPTVVLTDMGKKVS-ADPEFARKLKER------HPLRKFAEVEDVVNSILFLLSDRSASTSGGGI  235 (244)
T ss_dssp             HHHHHGGGTEEEEEEEECCBTTHHHHHHT-CCHHHHHHHHHH------STTSSCBCHHHHHHHHHHHHSGGGTTCCSSEE
T ss_pred             HHHHhhhcCeEEEEEecCcccCccccccc-cCHHHHHHHHhc------CCccCCCCHHHHHHHHHHHhCchhhcccCCEE
Confidence            8766   5899999999999986422100 000111122222      134689999999999999997642  234 45


Q ss_pred             EEec
Q 030406          151 LCAE  154 (178)
Q Consensus       151 ~~~~  154 (178)
                      ++.+
T Consensus       236 ~v~g  239 (244)
T 1cyd_A          236 LVDA  239 (244)
T ss_dssp             EEST
T ss_pred             EECC
Confidence            5644

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.19  E-value=7.1e-11  Score=84.31  Aligned_cols=124  Identities=15%  Similarity=0.119  Sum_probs=82.9

Q ss_pred             chhHHHHHHHHH----HHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVI----VAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll----~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.+++    ..+++.+.++||++||..+.++.                     .+...|+.+|...+.+.+.+
T Consensus       108 ~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  166 (245)
T 2ph3_A          108 LEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGN---------------------PGQANYVASKAGLIGFTRAV  166 (245)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------------------SSBHHHHHHHHHHHHHHHHH
T ss_pred             HhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCC---------------------CCCcchHHHHHHHHHHHHHH
Confidence            578999955554    45555677899999996555431                     13467999999999998887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+.   |+++.++||+.++++..... ...  .........      ....+++++|+|++++.++..+.  ..| .|+
T Consensus       167 a~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~--~~~~~~~~~------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  237 (245)
T 2ph3_A          167 AKEYAQRGITVNAVAPGFIETEMTERL-PQE--VKEAYLKQI------PAGRFGRPEEVAEAVAFLVSEKAGYITGQTLC  237 (245)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCHHHHTS-CHH--HHHHHHHTC------TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHHcCeEEEEEEEEeecCcchhhc-CHH--HHHHHHhcC------CCCCCcCHHHHHHHHHHHhCcccccccCCEEE
Confidence            6654   89999999999987642211 111  111111111      12457899999999999987542  234 666


Q ss_pred             EecC
Q 030406          152 CAES  155 (178)
Q Consensus       152 ~~~~  155 (178)
                      ++++
T Consensus       238 v~gg  241 (245)
T 2ph3_A          238 VDGG  241 (245)
T ss_dssp             ESTT
T ss_pred             ECCC
Confidence            7654

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.14  E-value=3.9e-10  Score=81.37  Aligned_cols=129  Identities=19%  Similarity=0.113  Sum_probs=83.5

Q ss_pred             chhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++.+.    + ..+||++||..+.++.                     .+...|+.+|...|.+.+.
T Consensus       120 ~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~  178 (264)
T 2pd6_A          120 IAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN---------------------VGQTNYAASKAGVIGLTQT  178 (264)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC---------------------TTBHHHHHHHHHHHHHHHH
T ss_pred             HhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC---------------------CCChhhHHHHHHHHHHHHH
Confidence            578999999999998753    3 5699999996554421                     2456799999999999988


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cE
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RY  150 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~  150 (178)
                      ++.+   .|+++.++||+.++++.....    ...+......     ......+++++|+|++++.++..+.  ..| .+
T Consensus       179 la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~-----~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  249 (264)
T 2pd6_A          179 AARELGRHGIRCNSVLPGFIATPMTQKV----PQKVVDKITE-----MIPMGHLGDPEDVADVVAFLASEDSGYITGTSV  249 (264)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCSCC--------------CTGG-----GCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHhhhcCeEEEEEeeecccccchhhc----CHHHHHHHHH-----hCCCCCCCCHHHHHHHHHHHcCCcccCCCCCEE
Confidence            7766   689999999999998753221    0001110000     0112357899999999999887532  334 55


Q ss_pred             EEec-CccCHH
Q 030406          151 LCAE-SVLHRG  160 (178)
Q Consensus       151 ~~~~-~~~s~~  160 (178)
                      ++.+ ..++.+
T Consensus       250 ~v~gg~~~~~~  260 (264)
T 2pd6_A          250 EVTGGLFMAEN  260 (264)
T ss_dssp             EESTTC-----
T ss_pred             EECCCceeccc
Confidence            6644 444433

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.12  E-value=3e-10  Score=80.82  Aligned_cols=124  Identities=23%  Similarity=0.164  Sum_probs=84.7

Q ss_pred             chhHHHHHHHHHHHHHhC----C------CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----K------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE   71 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~------~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E   71 (178)
                      +++|+.++.++++++.+.    +      ..+||++||..+..+                     ..+...|+.+|...+
T Consensus        98 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------------~~~~~~Y~~sK~a~~  156 (242)
T 1uay_A           98 LEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG---------------------QIGQAAYAASKGGVV  156 (242)
T ss_dssp             HHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC---------------------CTTCHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC---------------------CCCCchhhHHHHHHH
Confidence            578999999999998753    1      128999999544321                     124578999999999


Q ss_pred             HHHHHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC
Q 030406           72 KAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG  148 (178)
Q Consensus        72 ~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~  148 (178)
                      .+.+.++.+   .|+++.++||+.++++......    ..+...+....+.    ...+++++|+|++++.++..+...|
T Consensus       157 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~~~~----~~~~~~~~dva~~~~~l~~~~~~~G  228 (242)
T 1uay_A          157 ALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP----EKAKASLAAQVPF----PPRLGRPEEYAALVLHILENPMLNG  228 (242)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC----HHHHHHHHTTCCS----SCSCCCHHHHHHHHHHHHHCTTCCS
T ss_pred             HHHHHHHHHHhhcCcEEEEEEeccCcchhhhccc----hhHHHHHHhhCCC----cccCCCHHHHHHHHHHHhcCCCCCC
Confidence            998877655   3899999999999887532211    1112222222211    1347899999999999998754555


Q ss_pred             -cEEEec
Q 030406          149 -RYLCAE  154 (178)
Q Consensus       149 -~~~~~~  154 (178)
                       .+++.+
T Consensus       229 ~~~~v~g  235 (242)
T 1uay_A          229 EVVRLDG  235 (242)
T ss_dssp             CEEEEST
T ss_pred             cEEEEcC
Confidence             556644

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.12  E-value=3.4e-10  Score=82.10  Aligned_cols=128  Identities=20%  Similarity=0.137  Sum_probs=85.2

Q ss_pred             chhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.++++++.+.   + .+||++||.++.+..                    ..+...|+.+|...|.+++.++
T Consensus       127 ~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~--------------------~~~~~~Y~~sK~a~~~~~~~~~  185 (274)
T 1ja9_A          127 FNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTG--------------------IPNHALYAGSKAAVEGFCRAFA  185 (274)
T ss_dssp             HHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCS--------------------CCSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCC--------------------CCCCchHHHHHHHHHHHHHHHH
Confidence            578999999999998764   4 699999995443121                    0234679999999999999877


Q ss_pred             Hhc---CCcEEEecCCceeCCCCCCCC---------hhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC
Q 030406           79 VAR---GVDLVVVNPVLVLGPLLQSTV---------NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA  146 (178)
Q Consensus        79 ~~~---~~~~~i~R~~~v~G~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  146 (178)
                      .+.   ++++.++|||.+.++......         .............     +.....+++++|+|++++.++..+..
T Consensus       186 ~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~dva~~i~~l~~~~~~  260 (274)
T 1ja9_A          186 VDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLAN-----MNPLKRIGYPADIGRAVSALCQEESE  260 (274)
T ss_dssp             HHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHH-----TSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHh-----cCCCCCccCHHHHHHHHHHHhCcccc
Confidence            664   899999999999875321000         0000111111111     12345689999999999999875432


Q ss_pred             --CC-cEEEecC
Q 030406          147 --SG-RYLCAES  155 (178)
Q Consensus       147 --~~-~~~~~~~  155 (178)
                        .| .|+++++
T Consensus       261 ~~~G~~~~v~gG  272 (274)
T 1ja9_A          261 WINGQVIKLTGG  272 (274)
T ss_dssp             TCCSCEEEESTT
T ss_pred             cccCcEEEecCC
Confidence              34 6677654

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.12  E-value=3.4e-10  Score=81.88  Aligned_cols=124  Identities=15%  Similarity=0.168  Sum_probs=73.9

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++    ++.+.++||++||.++..+                     ..+...|+.+|...|.+.+.+
T Consensus       120 ~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~l  178 (266)
T 1xq1_A          120 ISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS---------------------ASVGSIYSATKGALNQLARNL  178 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------------------------------CCHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccC---------------------CCCCchHHHHHHHHHHHHHHH
Confidence            578999999999998    4556789999999544321                     124568999999999999887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~  151 (178)
                      +.+.   |+++.++||+.++++......   ...+.......     .....+++++|++++++.++..+  ...| .++
T Consensus       179 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~-----~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  250 (266)
T 1xq1_A          179 ACEWASDGIRANAVAPAVIATPLAEAVY---DDEFKKVVISR-----KPLGRFGEPEEVSSLVAFLCMPAASYITGQTIC  250 (266)
T ss_dssp             HHHHGGGTCEEEEEECCSCC---------------------------------CCGGGGHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHhHhCcEEEEEeeCCCccchhhhhc---CHHHHHHHHhc-----CCCCCCcCHHHHHHHHHHHcCccccCccCcEEE
Confidence            7664   899999999999987532210   00011111111     11234789999999999988653  2234 556


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       251 v~g  253 (266)
T 1xq1_A          251 VDG  253 (266)
T ss_dssp             CCC
T ss_pred             EcC
Confidence            644

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.11  E-value=1.8e-09  Score=78.00  Aligned_cols=122  Identities=16%  Similarity=0.115  Sum_probs=87.1

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++    ++.+..++|++||. +.+...                  +..+...|+.+|...+.+.+.+
T Consensus       124 ~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~-~~~~~~------------------~~~~~~~Y~~sKaa~~~l~~~l  184 (260)
T 3un1_A          124 LGVNVAGFFHITQRAAAEMLKQGSGHIVSITTS-LVDQPM------------------VGMPSALASLTKGGLNAVTRSL  184 (260)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCT-TTTSCB------------------TTCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHHcCCcEEEEEech-hhccCC------------------CCCccHHHHHHHHHHHHHHHHH
Confidence            578999999999987    45667899999994 432110                  1135578999999999999988


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC-cEEEe
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCA  153 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~  153 (178)
                      +.+.   |+++.+++||.+.++.....   .    .......     .....+.+++|+|++++.+.+.....| .++++
T Consensus       185 a~e~~~~gI~vn~v~PG~v~t~~~~~~---~----~~~~~~~-----~p~~r~~~~~dva~av~~L~~~~~itG~~i~vd  252 (260)
T 3un1_A          185 AMEFSRSGVRVNAVSPGVIKTPMHPAE---T----HSTLAGL-----HPVGRMGEIRDVVDAVLYLEHAGFITGEILHVD  252 (260)
T ss_dssp             HHHTTTTTEEEEEEEECCBCCTTSCGG---G----HHHHHTT-----STTSSCBCHHHHHHHHHHHHHCTTCCSCEEEES
T ss_pred             HHHhCcCCeEEEEEeecCCCCCCCCHH---H----HHHHhcc-----CCCCCCcCHHHHHHHHHHhcccCCCCCcEEEEC
Confidence            8777   89999999999988753221   1    1111121     123457789999999999866665555 56675


Q ss_pred             c
Q 030406          154 E  154 (178)
Q Consensus       154 ~  154 (178)
                      +
T Consensus       253 G  253 (260)
T 3un1_A          253 G  253 (260)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.11  E-value=1.5e-09  Score=78.07  Aligned_cols=128  Identities=14%  Similarity=0.099  Sum_probs=86.8

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..++|++||..+..+.                   +..+...|+.+|...|.+++.+
T Consensus       119 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------------~~~~~~~Y~~sK~a~~~~~~~l  179 (260)
T 3awd_A          119 VDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN-------------------RPQQQAAYNASKAGVHQYIRSL  179 (260)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------------------SSSCCHHHHHHHHHHHHHHHHH
T ss_pred             HHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC-------------------CCCCccccHHHHHHHHHHHHHH
Confidence            57899999999988864    356799999995433211                   1123478999999999999988


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~  151 (178)
                      +.+   .|+++.++||+.++++...... ...........+.      ....+++++|+|++++.++..+  ...| .++
T Consensus       180 ~~e~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  252 (260)
T 3awd_A          180 AAEWAPHGIRANAVAPTYIETTLTRFGM-EKPELYDAWIAGT------PMGRVGQPDEVASVVQFLASDAASLMTGAIVN  252 (260)
T ss_dssp             HHHHGGGTEEEEEEEECCBCCTTTHHHH-TCHHHHHHHHHTC------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhhhcCeEEEEEEeeeeccchhhccc-CChHHHHHHHhcC------CcCCCCCHHHHHHHHHHHhCchhccCCCcEEE
Confidence            776   6899999999999987532100 0001111222221      1235889999999999988653  2344 667


Q ss_pred             EecC
Q 030406          152 CAES  155 (178)
Q Consensus       152 ~~~~  155 (178)
                      +++.
T Consensus       253 v~gg  256 (260)
T 3awd_A          253 VDAG  256 (260)
T ss_dssp             ESTT
T ss_pred             ECCc
Confidence            7654

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.10  E-value=1.2e-09  Score=81.32  Aligned_cols=138  Identities=20%  Similarity=0.070  Sum_probs=85.6

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++    ++.+..++|++||.++..+.                    ......|+.||...|.+.+.+
T Consensus       115 ~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~--------------------~~~~~~Y~asKaa~~~~~~~l  174 (324)
T 3u9l_A          115 YDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGT--------------------PPYLAPYFAAKAAMDAIAVQY  174 (324)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--------------------CSSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCC--------------------CCcchhHHHHHHHHHHHHHHH
Confidence            588999999999998    55677899999996443221                    013467999999999999988


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCC---CChhhHHHHHHHHhCCccccC--------CCCcccccHHHHHHHHHHhhcC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQS---TVNASIIHILKYLNGSAKTYA--------NSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~--------~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      +.+   .|+++.+++||.+.++....   ....................+        ....+..+++|++++++.+++.
T Consensus       175 a~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~  254 (324)
T 3u9l_A          175 ARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDADVSLVADAIVRVVGT  254 (324)
T ss_dssp             HHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTCCTHHHHHHHHHHHTS
T ss_pred             HHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcC
Confidence            766   58999999999997543211   001111111111111111110        0112236899999999999988


Q ss_pred             CCC--CCcEEEecCccCH
Q 030406          144 PSA--SGRYLCAESVLHR  159 (178)
Q Consensus       144 ~~~--~~~~~~~~~~~s~  159 (178)
                      +..  ...+.+++....+
T Consensus       255 ~~~~~~~~~~~gp~~~~~  272 (324)
T 3u9l_A          255 ASGKRPFRVHVDPAEDGA  272 (324)
T ss_dssp             CTTCCCSEEEECTTCCSH
T ss_pred             CCCCCCeEEEeCCcchHH
Confidence            743  2255666655553

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.10  E-value=5.7e-10  Score=79.72  Aligned_cols=124  Identities=15%  Similarity=0.067  Sum_probs=83.7

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+.++||++||..+.++.                     .+...|+.+|...+.+.+.+
T Consensus       113 ~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  171 (248)
T 2pnf_A          113 LKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN---------------------VGQVNYSTTKAGLIGFTKSL  171 (248)
T ss_dssp             HHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC---------------------CCCchHHHHHHHHHHHHHHH
Confidence            5789999977666554    4567899999996555431                     13467999999999998877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~  151 (178)
                      +.+   .++++.++||+.++++..... ..   .+........     ....+++++|++++++.++..+  ...| .|+
T Consensus       172 a~e~~~~~i~v~~v~Pg~v~t~~~~~~-~~---~~~~~~~~~~-----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  242 (248)
T 2pnf_A          172 AKELAPRNVLVNAVAPGFIETDMTAVL-SE---EIKQKYKEQI-----PLGRFGSPEEVANVVLFLCSELASYITGEVIH  242 (248)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCGGGGGS-CH---HHHHHHHHTC-----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhcccCeEEEEEEeceecCchhhhc-cH---HHHHHHHhcC-----CCCCccCHHHHHHHHHHHhCchhhcCCCcEEE
Confidence            654   479999999999988753221 11   1111111111     1245889999999999988753  2234 667


Q ss_pred             EecC
Q 030406          152 CAES  155 (178)
Q Consensus       152 ~~~~  155 (178)
                      ++++
T Consensus       243 v~gg  246 (248)
T 2pnf_A          243 VNGG  246 (248)
T ss_dssp             ESTT
T ss_pred             eCCC
Confidence            7543

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.10  E-value=6.9e-10  Score=79.48  Aligned_cols=124  Identities=14%  Similarity=0.157  Sum_probs=86.8

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++    ++.+..++|++||..+.++.                     .+...|+.+|...+.+.+.+
T Consensus       110 ~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  168 (246)
T 3osu_A          110 IDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGN---------------------PGQANYVATKAGVIGLTKSA  168 (246)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC---------------------CCChHHHHHHHHHHHHHHHH
Confidence            578999999999998    44566799999996555431                     24567999999999998887


Q ss_pred             HH---hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC--CC-cEE
Q 030406           78 AV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA--SG-RYL  151 (178)
Q Consensus        78 ~~---~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~  151 (178)
                      +.   ..|+++..++||.+.++.......    .........     .....+.+++|++++++.++..+..  .| .++
T Consensus       169 a~e~~~~gi~vn~v~PG~v~t~~~~~~~~----~~~~~~~~~-----~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~  239 (246)
T 3osu_A          169 ARELASRGITVNAVAPGFIVSDMTDALSD----ELKEQMLTQ-----IPLARFGQDTDIANTVAFLASDKAKYITGQTIH  239 (246)
T ss_dssp             HHHHGGGTEEEEEEEECSBGGGCCSCSCH----HHHHHHHTT-----CTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHhcccCeEEEEEEECCCcCCcccccCH----HHHHHHHhc-----CCCCCCcCHHHHHHHHHHHhCccccCCCCCEEE
Confidence            76   458999999999998765333211    112222221     1234577899999999998875432  34 666


Q ss_pred             EecC
Q 030406          152 CAES  155 (178)
Q Consensus       152 ~~~~  155 (178)
                      +++.
T Consensus       240 vdgG  243 (246)
T 3osu_A          240 VNGG  243 (246)
T ss_dssp             ESTT
T ss_pred             eCCC
Confidence            7543

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.09  E-value=1.6e-09  Score=77.07  Aligned_cols=118  Identities=15%  Similarity=0.151  Sum_probs=70.5

Q ss_pred             HHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcCCcEE
Q 030406            7 IGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARGVDLV   86 (178)
Q Consensus         7 ~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~   86 (178)
                      ..+++++++|++.++++||++|| .++|+...... ....|..      ...+...|    ..+|+.+    +..|++++
T Consensus       103 ~~~~~~~~~~~~~~~~~iV~iSS-~~~~~~~~~~~-~~~~~~~------~~~~~~~~----~~~~~~l----~~~gi~~~  166 (236)
T 3qvo_A          103 IQANSVIAAMKACDVKRLIFVLS-LGIYDEVPGKF-VEWNNAV------IGEPLKPF----RRAADAI----EASGLEYT  166 (236)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEECC-CCC-----------------------CGGGHHH----HHHHHHH----HTSCSEEE
T ss_pred             HHHHHHHHHHHHcCCCEEEEEec-ceecCCCCccc-ccchhhc------ccchHHHH----HHHHHHH----HHCCCCEE
Confidence            46789999999999999999999 46665432211 0122221      12233344    4445544    35699999


Q ss_pred             EecCCceeCCCCCCCChhhHHHHHHHHhCCccccCC-CCcccccHHHHHHHHHHhhcCCC--CCCcEEEec
Q 030406           87 VVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYAN-SVQAYVHVRDVALAHILVYETPS--ASGRYLCAE  154 (178)
Q Consensus        87 i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~~~  154 (178)
                      ++||+.++++......              ....+. ....+++++|+|++++.++..+.  .+..|++++
T Consensus       167 ~vrPg~i~~~~~~~~~--------------~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~  223 (236)
T 3qvo_A          167 ILRPAWLTDEDIIDYE--------------LTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQ  223 (236)
T ss_dssp             EEEECEEECCSCCCCE--------------EECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEEC
T ss_pred             EEeCCcccCCCCcceE--------------EeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecC
Confidence            9999999986532210              000011 12368999999999999999876  344776644

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.09  E-value=6.3e-10  Score=79.40  Aligned_cols=124  Identities=18%  Similarity=0.172  Sum_probs=84.8

Q ss_pred             chhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++.+.    + ..++|++||. +.+..                    ..+.+.|+.+|...|.+++.
T Consensus       104 ~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~-~~~~~--------------------~~~~~~Y~~sK~a~~~~~~~  162 (244)
T 3d3w_A          104 FEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQ-CSQRA--------------------VTNHSVYCSTKGALDMLTKV  162 (244)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG-GGTSC--------------------CTTBHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCch-hhccC--------------------CCCCchHHHHHHHHHHHHHH
Confidence            578999999998888652    4 6799999995 33210                    12457899999999999998


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCC-hhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-c
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTV-NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-R  149 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~  149 (178)
                      ++.+   .++++.++||+.++++...... ....  ......+      .....+++++|+|++++.++..+  ...| .
T Consensus       163 la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  234 (244)
T 3d3w_A          163 MALELGPHKIRVNAVNPTVVMTSMGQATWSDPHK--AKTMLNR------IPLGKFAEVEHVVNAILFLLSDRSGMTTGST  234 (244)
T ss_dssp             HHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTH--HHHHHHT------CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHhcccCeEEEEEEeccccccchhhhccChHH--HHHHHhh------CCCCCCcCHHHHHHHHHHHcCccccCCCCCE
Confidence            7765   4799999999999886422100 0011  1111111      12346899999999999999754  2344 6


Q ss_pred             EEEec
Q 030406          150 YLCAE  154 (178)
Q Consensus       150 ~~~~~  154 (178)
                      |++++
T Consensus       235 ~~v~g  239 (244)
T 3d3w_A          235 LPVEG  239 (244)
T ss_dssp             EEEST
T ss_pred             EEECC
Confidence            67754

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.07  E-value=2e-09  Score=76.95  Aligned_cols=126  Identities=14%  Similarity=0.073  Sum_probs=84.2

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+.+++|++||.++.++.                     .+...|+.+|...|.+.+.+
T Consensus       111 ~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  169 (250)
T 2cfc_A          111 MAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF---------------------PGRSAYTTSKGAVLQLTKSV  169 (250)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC---------------------CCchhHHHHHHHHHHHHHHH
Confidence            5689999877766654    4467899999995443221                     24568999999999999987


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+.   |+++.++||+.++++......  ....+........     ....+.+++|+|++++.++..+.  ..| .++
T Consensus       170 ~~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  242 (250)
T 2cfc_A          170 AVDYAGSGIRCNAVCPGMIETPMTQWRL--DQPELRDQVLARI-----PQKEIGTAAQVADAVMFLAGEDATYVNGAALV  242 (250)
T ss_dssp             HHHHGGGTEEEEEEEECSBCSTTTHHHH--TSHHHHHHHHTTC-----TTCSCBCHHHHHHHHHHHHSTTCTTCCSCEEE
T ss_pred             HHHhcccCeEEEEEEeCcCccCcccccc--CCHHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHcCchhhcccCCEEE
Confidence            7664   899999999999987532100  0011112121211     12357899999999999987653  235 555


Q ss_pred             EecC
Q 030406          152 CAES  155 (178)
Q Consensus       152 ~~~~  155 (178)
                      +.+.
T Consensus       243 v~gG  246 (250)
T 2cfc_A          243 MDGA  246 (250)
T ss_dssp             ESTT
T ss_pred             ECCc
Confidence            6543

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.06  E-value=1.1e-09  Score=78.96  Aligned_cols=127  Identities=15%  Similarity=0.127  Sum_probs=85.6

Q ss_pred             chhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++...    + -.++|++||.++.++.                     .....|+.+|...+.+.+.
T Consensus       110 ~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~  168 (259)
T 4e6p_A          110 FAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE---------------------ALVAIYCATKAAVISLTQS  168 (259)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------------------TTBHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC---------------------CCChHHHHHHHHHHHHHHH
Confidence            578999999999988642    2 4589999996544321                     2446799999999999998


Q ss_pred             HHHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCcc-----cc--CCCCcccccHHHHHHHHHHhhcCCC-
Q 030406           77 EAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK-----TY--ANSVQAYVHVRDVALAHILVYETPS-  145 (178)
Q Consensus        77 ~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~i~v~D~a~~~~~~~~~~~-  145 (178)
                      ++.+.   |+++..++||.+.++....     ...+.........     ..  ......+.+++|+|++++.++.... 
T Consensus       169 la~e~~~~gi~vn~v~PG~v~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~  243 (259)
T 4e6p_A          169 AGLDLIKHRINVNAIAPGVVDGEHWDG-----VDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESD  243 (259)
T ss_dssp             HHHHHGGGTEEEEEEEECCBCSTTHHH-----HHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGT
T ss_pred             HHHHhhhcCCEEEEEEECCCccchhhh-----hhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccC
Confidence            77654   8999999999998875211     1111111111110     01  1345678999999999998886432 


Q ss_pred             -CCC-cEEEec
Q 030406          146 -ASG-RYLCAE  154 (178)
Q Consensus       146 -~~~-~~~~~~  154 (178)
                       ..| .+++++
T Consensus       244 ~itG~~i~vdg  254 (259)
T 4e6p_A          244 YIVSQTYNVDG  254 (259)
T ss_dssp             TCCSCEEEEST
T ss_pred             CCCCCEEEECc
Confidence             234 667754

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.06  E-value=8.4e-10  Score=79.61  Aligned_cols=131  Identities=17%  Similarity=0.188  Sum_probs=86.6

Q ss_pred             chhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++...    + ..+||++||..+.++...        +..      +..+...|+.+|...|.+++.
T Consensus       120 ~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------~~~------~~~~~~~Y~~sK~a~~~~~~~  185 (265)
T 1h5q_A          120 YDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS--------SLN------GSLTQVFYNSSKAACSNLVKG  185 (265)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE--------ETT------EECSCHHHHHHHHHHHHHHHH
T ss_pred             HhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc--------ccc------ccccccccHHHHHHHHHHHHH
Confidence            578999999999988642    3 478999999644432110        000      224568899999999999988


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cE
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RY  150 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~  150 (178)
                      ++.+   .|+++.++||+.+.++...... ..   .........     ....+++++|+|++++.++..+.  ..| .+
T Consensus       186 la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~---~~~~~~~~~-----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  256 (265)
T 1h5q_A          186 LAAEWASAGIRVNALSPGYVNTDQTAHMD-KK---IRDHQASNI-----PLNRFAQPEEMTGQAILLLSDHATYMTGGEY  256 (265)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCCGGGGGSC-HH---HHHHHHHTC-----TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHhcCcEEEEEecCccccccccccc-hh---HHHHHHhcC-----cccCCCCHHHHHHHHHhhccCchhcCcCcEE
Confidence            7765   3899999999999887532211 11   111111111     12347899999999999986542  334 66


Q ss_pred             EEecC
Q 030406          151 LCAES  155 (178)
Q Consensus       151 ~~~~~  155 (178)
                      ++++.
T Consensus       257 ~v~gG  261 (265)
T 1h5q_A          257 FIDGG  261 (265)
T ss_dssp             EECTT
T ss_pred             EecCC
Confidence            66543

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.05  E-value=3e-09  Score=75.00  Aligned_cols=127  Identities=11%  Similarity=0.008  Sum_probs=87.5

Q ss_pred             chhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~--~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...-  -.++|++||..+..+                     ..+...|+.+|...+.+.+.++.
T Consensus        88 ~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------------------~~~~~~Y~asK~a~~~~~~~la~  146 (223)
T 3uce_A           88 FDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKV---------------------VANTYVKAAINAAIEATTKVLAK  146 (223)
T ss_dssp             HHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             heeeeeeHHHHHHHHHhhccCCeEEEEecchhhccC---------------------CCCchHHHHHHHHHHHHHHHHHH
Confidence            5789999999999998742  248999999543321                     12456899999999999999888


Q ss_pred             hcC-CcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC-cEEEec
Q 030406           80 ARG-VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCAE  154 (178)
Q Consensus        80 ~~~-~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~  154 (178)
                      +.+ +++..++||.+..+............+.......     .....+.+++|+|++++.++..+...| .+++++
T Consensus       147 e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~dvA~~~~~l~~~~~~tG~~i~vdg  218 (223)
T 3uce_A          147 ELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSH-----LPVGKVGEASDIAMAYLFAIQNSYMTGTVIDVDG  218 (223)
T ss_dssp             HHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHH-----STTCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             hhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhc-----CCCCCccCHHHHHHHHHHHccCCCCCCcEEEecC
Confidence            765 8899999999987653332122222222211111     123457789999999999998766566 556644

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.05  E-value=6.7e-10  Score=79.24  Aligned_cols=123  Identities=15%  Similarity=0.136  Sum_probs=84.1

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.+    .+..+||++||.++.++.                     .+...|+.+|...+.+.+.+
T Consensus       107 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  165 (244)
T 1edo_A          107 IDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN---------------------IGQANYAAAKAGVIGFSKTA  165 (244)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC---------------------CCCccchhhHHHHHHHHHHH
Confidence            57899999999988865    367899999996555431                     13467999999999998877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC---CCC-cE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS---ASG-RY  150 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~-~~  150 (178)
                      +.+   .|+++.++||+.+.++......    ...........     ....+++++|+|++++.++..+.   ..| .+
T Consensus       166 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~~-----~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~  236 (244)
T 1edo_A          166 AREGASRNINVNVVCPGFIASDMTAKLG----EDMEKKILGTI-----PLGRTGQPENVAGLVEFLALSPAASYITGQAF  236 (244)
T ss_dssp             HHHHHTTTEEEEEEEECSBCSHHHHTTC----HHHHHHHHTSC-----TTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEE
T ss_pred             HHHhhhcCCEEEEEeeCccccchhhhcC----hHHHHHHhhcC-----CCCCCCCHHHHHHHHHHHhCCCccCCcCCCEE
Confidence            665   4899999999999876422110    11111111211     12357899999999999984432   234 55


Q ss_pred             EEec
Q 030406          151 LCAE  154 (178)
Q Consensus       151 ~~~~  154 (178)
                      ++++
T Consensus       237 ~v~g  240 (244)
T 1edo_A          237 TIDG  240 (244)
T ss_dssp             EEST
T ss_pred             EeCC
Confidence            6654

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.05  E-value=2.7e-10  Score=83.16  Aligned_cols=143  Identities=20%  Similarity=0.137  Sum_probs=95.2

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++..    .+-.+||++||.++..+                     ..+...|+.+|...+.+.+.+
T Consensus       120 ~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asK~a~~~l~~~l  178 (281)
T 3svt_A          120 VDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNT---------------------HRWFGAYGVTKSAVDHLMQLA  178 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC---------------------CTTCTHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCC---------------------CCCChhHHHHHHHHHHHHHHH
Confidence            57899999999998764    34459999999644321                     124567999999999999887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+.   |+++..++||.+.++..... .............      .....+.+++|+|++++.++....  ..| .++
T Consensus       179 a~e~~~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~~------~p~~r~~~~~dva~~~~~l~s~~~~~itG~~~~  251 (281)
T 3svt_A          179 ADELGASWVRVNSIRPGLIRTDLVAAI-TESAELSSDYAMC------TPLPRQGEVEDVANMAMFLLSDAASFVTGQVIN  251 (281)
T ss_dssp             HHHHGGGTEEEEEEEECSBCSGGGHHH-HTCHHHHHHHHHH------CSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhhhcCeEEEEEEeCcCcCcchhhc-ccCHHHHHHHHhc------CCCCCCCCHHHHHHHHHHHhCcccCCCCCCEEE
Confidence            7654   58999999999987642110 0000111111111      123456789999999999887543  234 667


Q ss_pred             E-ecCccC-HHHHHHHHHHhCCC
Q 030406          152 C-AESVLH-RGEVVEILAKFFPE  172 (178)
Q Consensus       152 ~-~~~~~s-~~e~~~~i~~~~~~  172 (178)
                      + ++..++ ..++.+.+.+.++.
T Consensus       252 vdgG~~~~~~~~~~~~~~~~~~~  274 (281)
T 3svt_A          252 VDGGQMLRRGPDFSAMLEPVFGR  274 (281)
T ss_dssp             ESTTGGGSCCCCCHHHHHHHHCT
T ss_pred             eCCChhcccCCcchhccccccCC
Confidence            7 445555 66778877777654

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.04  E-value=2.2e-09  Score=76.64  Aligned_cols=118  Identities=16%  Similarity=0.041  Sum_probs=77.9

Q ss_pred             chhHHHHHHHHHHHHHhC----------C-----CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----------K-----VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYG   66 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----------~-----~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s   66 (178)
                      +++|+.++.++++++...          +     ..+||++||..+.++...        +..      +..+...|+.+
T Consensus       110 ~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------~~~------~~~~~~~Y~~s  175 (250)
T 1yo6_A          110 LDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT--------SGS------AQFPVLAYRMS  175 (250)
T ss_dssp             HHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC--------STT------SSSCBHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCcc--------ccc------ccCCccHHHHH
Confidence            578999999998887642          4     689999999655443210        111      12356789999


Q ss_pred             HHHHHHHHHHHHHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           67 KAVAEKAAWEEAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        67 K~~~E~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      |...+.+++.++.+.   |+++.+++||.+.++....                        ..+++.+|+|+.++.++..
T Consensus       176 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------------------~~~~~~~~~a~~~~~~~~~  231 (250)
T 1yo6_A          176 KAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK------------------------NAALTVEQSTAELISSFNK  231 (250)
T ss_dssp             HHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------------HHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC------------------------CCCCCHHHHHHHHHHHHhc
Confidence            999999999887765   8999999999986543110                        1467899999999999987


Q ss_pred             CC--CCCcEE-EecCcc
Q 030406          144 PS--ASGRYL-CAESVL  157 (178)
Q Consensus       144 ~~--~~~~~~-~~~~~~  157 (178)
                      +.  ..|.|+ +.++.+
T Consensus       232 ~~~~~~G~~~~~~g~~~  248 (250)
T 1yo6_A          232 LDNSHNGRFFMRNLKPY  248 (250)
T ss_dssp             CCGGGTTCEEETTEEEC
T ss_pred             ccccCCCeEEEECCcCC
Confidence            64  355664 444433

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.04  E-value=1.2e-09  Score=78.35  Aligned_cols=128  Identities=13%  Similarity=0.075  Sum_probs=83.6

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+.++||++||..+..+.                   +..+.+.|+.+|...|.+++.+
T Consensus       113 ~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------------~~~~~~~Y~~sK~a~~~~~~~~  173 (254)
T 2wsb_A          113 MAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN-------------------RPQFASSYMASKGAVHQLTRAL  173 (254)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------------------SSSCBHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC-------------------CCCcchHHHHHHHHHHHHHHHH
Confidence            5689999777776653    4567899999995433211                   1124478999999999999887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~  151 (178)
                      +.+.   |+++.++||+.++++..... ..............      ....+++++|+|++++.++..+  ...| .++
T Consensus       174 ~~~~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  246 (254)
T 2wsb_A          174 AAEWAGRGVRVNALAPGYVATEMTLKM-RERPELFETWLDMT------PMGRCGEPSEIAAAALFLASPAASYVTGAILA  246 (254)
T ss_dssp             HHHHGGGTEEEEEEEECCBCSHHHHHH-HTCHHHHHHHHHTS------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHhhcCeEEEEEEecccCchhhhcc-ccChHHHHHHHhcC------CCCCCCCHHHHHHHHHHHhCcccccccCCEEE
Confidence            7664   89999999999988642110 00001111222211      1245889999999999988653  2344 556


Q ss_pred             EecC
Q 030406          152 CAES  155 (178)
Q Consensus       152 ~~~~  155 (178)
                      ++++
T Consensus       247 v~gG  250 (254)
T 2wsb_A          247 VDGG  250 (254)
T ss_dssp             ESTT
T ss_pred             ECCC
Confidence            6554

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.04  E-value=8.4e-10  Score=78.85  Aligned_cols=124  Identities=12%  Similarity=0.051  Sum_probs=80.1

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.+    .+..+||++||.++.++.                     .+...|+.+|...|.+.+.+
T Consensus       111 ~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  169 (247)
T 2hq1_A          111 LNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGN---------------------AGQANYAASKAGLIGFTKSI  169 (247)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC------------------------------CHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC---------------------CCCcHhHHHHHHHHHHHHHH
Confidence            57899998888887764    467899999996555532                     13467999999999999887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+.   ++++.+++|+.+.++..... .   ..........     .....+++++|++++++.++..+.  ..| .|+
T Consensus       170 a~e~~~~gi~v~~v~Pg~v~t~~~~~~-~---~~~~~~~~~~-----~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  240 (247)
T 2hq1_A          170 AKEFAAKGIYCNAVAPGIIKTDMTDVL-P---DKVKEMYLNN-----IPLKRFGTPEEVANVVGFLASDDSNYITGQVIN  240 (247)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCHHHHTS-C---HHHHHHHHTT-----STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHcCcEEEEEEEEEEeccchhhc-c---hHHHHHHHhh-----CCCCCCCCHHHHHHHHHHHcCcccccccCcEEE
Confidence            6654   79999999999876431111 0   1111111111     123458899999999998886532  234 667


Q ss_pred             EecC
Q 030406          152 CAES  155 (178)
Q Consensus       152 ~~~~  155 (178)
                      ++++
T Consensus       241 v~gG  244 (247)
T 2hq1_A          241 IDGG  244 (247)
T ss_dssp             ESTT
T ss_pred             eCCC
Confidence            7553

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.03  E-value=1.4e-09  Score=78.57  Aligned_cols=127  Identities=15%  Similarity=0.133  Sum_probs=83.6

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..+||++||.++..+                     ..+...|+.+|...+.+.+.+
T Consensus       113 ~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~l  171 (263)
T 3ai3_A          113 WELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQP---------------------LWYEPIYNVTKAALMMFSKTL  171 (263)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC---------------------CCCcchHHHHHHHHHHHHHHH
Confidence            5789999999888875    346789999999543321                     023467999999999999887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChh-------hHHHH-HHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC-
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNA-------SIIHI-LKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS-  145 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~-------~~~~~-~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-  145 (178)
                      +.+   .|+++.++|||.++++........       ..... .......     .....+++++|+|++++.++..+. 
T Consensus       172 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~~~~~~~dvA~~~~~l~s~~~~  246 (263)
T 3ai3_A          172 ATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEH-----APIKRFASPEELANFFVFLCSERAT  246 (263)
T ss_dssp             HHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHH-----CTTCSCBCHHHHHHHHHHHTSTTCT
T ss_pred             HHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcC-----CCCCCCcCHHHHHHHHHHHcCcccc
Confidence            765   589999999999988642110000       00011 1111110     123458899999999999987543 


Q ss_pred             -CCC-cEEEec
Q 030406          146 -ASG-RYLCAE  154 (178)
Q Consensus       146 -~~~-~~~~~~  154 (178)
                       ..| .+++++
T Consensus       247 ~~~G~~~~vdg  257 (263)
T 3ai3_A          247 YSVGSAYFVDG  257 (263)
T ss_dssp             TCCSCEEEEST
T ss_pred             CCCCcEEEECC
Confidence             234 566644

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.02  E-value=3.7e-09  Score=75.70  Aligned_cols=124  Identities=15%  Similarity=0.133  Sum_probs=81.2

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..+||++||.++..+                     ..+...|+.+|...+.+.+.+
T Consensus       112 ~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~l  170 (249)
T 3f9i_A          112 IDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAG---------------------NPGQANYCASKAGLIGMTKSL  170 (249)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--C---------------------CSCSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccC---------------------CCCCchhHHHHHHHHHHHHHH
Confidence            57899999999888753    45579999999544322                     124567999999999998877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+   .|+++.+++||.+.++..........   .....+      .....+.+++|+|++++.++..+.  ..| .++
T Consensus       171 a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~---~~~~~~------~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~  241 (249)
T 3f9i_A          171 SYEVATRGITVNAVAPGFIKSDMTDKLNEKQR---EAIVQK------IPLGTYGIPEDVAYAVAFLASNNASYITGQTLH  241 (249)
T ss_dssp             HHHHGGGTEEEEEEEECCBC------CCHHHH---HHHHHH------CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHcCcEEEEEecCccccCcccccCHHHH---HHHHhc------CCCCCCcCHHHHHHHHHHHcCCccCCccCcEEE
Confidence            665   48999999999997764322111111   111111      234568889999999999987543  234 556


Q ss_pred             EecC
Q 030406          152 CAES  155 (178)
Q Consensus       152 ~~~~  155 (178)
                      +++.
T Consensus       242 vdgG  245 (249)
T 3f9i_A          242 VNGG  245 (249)
T ss_dssp             ESTT
T ss_pred             ECCC
Confidence            7553

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.01  E-value=3.2e-09  Score=74.62  Aligned_cols=112  Identities=12%  Similarity=0.065  Sum_probs=75.1

Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCc-hHHHHHHHHHHHHHHHHHhcCC
Q 030406            5 AVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKN-WYCYGKAVAEKAAWEEAVARGV   83 (178)
Q Consensus         5 nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~~~~   83 (178)
                      |+. ++++++++++.++++||++||. ..|+.... +   ..+.       ...... .|+.+|...|.+++    +.++
T Consensus        85 n~~-~~~~~~~~~~~~~~~iv~iSs~-~~~~~~~~-~---~~~~-------~~~~~~~~y~~~K~~~e~~~~----~~~i  147 (221)
T 3r6d_A           85 GSD-MASIVKALSRXNIRRVIGVSMA-GLSGEFPV-A---LEKW-------TFDNLPISYVQGERQARNVLR----ESNL  147 (221)
T ss_dssp             HHH-HHHHHHHHHHTTCCEEEEEEET-TTTSCSCH-H---HHHH-------HHHTSCHHHHHHHHHHHHHHH----HSCS
T ss_pred             Chh-HHHHHHHHHhcCCCeEEEEeec-eecCCCCc-c---cccc-------cccccccHHHHHHHHHHHHHH----hCCC
Confidence            566 9999999999999999999994 55532110 0   1000       111223 79999999999876    3589


Q ss_pred             cEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhh--cCCC
Q 030406           84 DLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVY--ETPS  145 (178)
Q Consensus        84 ~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~--~~~~  145 (178)
                      +++++||+.++++.........        ...    ......+++.+|+|++++.++  ..+.
T Consensus       148 ~~~~vrpg~v~~~~~~~~~~~~--------~~~----~~~~~~~~~~~dvA~~~~~l~~~~~~~  199 (221)
T 3r6d_A          148 NYTILRLTWLYNDPEXTDYELI--------PEG----AQFNDAQVSREAVVKAIFDILHAADET  199 (221)
T ss_dssp             EEEEEEECEEECCTTCCCCEEE--------CTT----SCCCCCEEEHHHHHHHHHHHHTCSCCG
T ss_pred             CEEEEechhhcCCCCCcceeec--------cCC----ccCCCceeeHHHHHHHHHHHHHhcChh
Confidence            9999999999987322210000        000    011234899999999999999  7664

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.01  E-value=6.6e-09  Score=75.43  Aligned_cols=126  Identities=18%  Similarity=0.101  Sum_probs=87.4

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++    ++.+..+||++||..+..+                     ..+...|+.+|...+.+.+.+
T Consensus       115 ~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~l  173 (271)
T 3tzq_B          115 FTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAA---------------------YDMSTAYACTKAAIETLTRYV  173 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSB---------------------CSSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCC---------------------CCCChHHHHHHHHHHHHHHHH
Confidence            578999999999998    5666789999999644321                     124578999999999999988


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+   +|+++..++||.+.++........   ..........     ....+..++|+|++++.++..+.  ..| .++
T Consensus       174 a~e~~~~gi~vn~v~PG~v~t~~~~~~~~~---~~~~~~~~~~-----~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~  245 (271)
T 3tzq_B          174 ATQYGRHGVRCNAIAPGLVRTPRLEVGLPQ---PIVDIFATHH-----LAGRIGEPHEIAELVCFLASDRAAFITGQVIA  245 (271)
T ss_dssp             HHHHGGGTEEEEEEEECCBCCTTTC---CH---HHHHHHHTTS-----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHhhcCEEEEEEEeCCCcCccccccCCH---HHHHHHHhcC-----CCCCCcCHHHHHHHHHHHhCcccCCcCCCEEE
Confidence            776   689999999999998754322111   1112222221     12346789999999999887542  345 556


Q ss_pred             EecCc
Q 030406          152 CAESV  156 (178)
Q Consensus       152 ~~~~~  156 (178)
                      +.+..
T Consensus       246 vdGG~  250 (271)
T 3tzq_B          246 ADSGL  250 (271)
T ss_dssp             ESTTT
T ss_pred             ECCCc
Confidence            75543

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.01  E-value=4.7e-10  Score=80.57  Aligned_cols=126  Identities=13%  Similarity=0.067  Sum_probs=85.2

Q ss_pred             chhHHHHHHHHHHHHHh----CC--C---CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK--V---RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEK   72 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~--~---~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~   72 (178)
                      +++|+.++.++++++..    .+  .   .++|++||..+.. .+                   ..+...|+.+|...|.
T Consensus       114 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-~~-------------------~~~~~~Y~~sK~a~~~  173 (258)
T 3afn_B          114 MDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHT-GG-------------------GPGAGLYGAAKAFLHN  173 (258)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHH-CC-------------------CTTCHHHHHHHHHHHH
T ss_pred             HHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhcc-CC-------------------CCCchHHHHHHHHHHH
Confidence            57899999999887653    12  2   6899999953322 00                   0245689999999999


Q ss_pred             HHHHHHHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC---CC
Q 030406           73 AAWEEAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP---SA  146 (178)
Q Consensus        73 ~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~  146 (178)
                      +++.++.+.   |+++.++||+.++++......    ..+.......     .....+++++|+|++++.++..+   ..
T Consensus       174 ~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~-----~~~~~~~~~~dva~~~~~l~~~~~~~~~  244 (258)
T 3afn_B          174 VHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKT----QDVRDRISNG-----IPMGRFGTAEEMAPAFLFFASHLASGYI  244 (258)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCC----HHHHHHHHTT-----CTTCSCBCGGGTHHHHHHHHCHHHHTTC
T ss_pred             HHHHHHHhhcccCeEEEEEeCCCcccccccccC----HHHHHHHhcc-----CCCCcCCCHHHHHHHHHHHhCcchhccc
Confidence            998876654   899999999999987543211    1111222121     12346899999999999998753   22


Q ss_pred             CC-cEEEecCc
Q 030406          147 SG-RYLCAESV  156 (178)
Q Consensus       147 ~~-~~~~~~~~  156 (178)
                      .| .|+++++.
T Consensus       245 ~G~~~~v~gg~  255 (258)
T 3afn_B          245 TGQVLDINGGQ  255 (258)
T ss_dssp             CSEEEEESTTS
T ss_pred             cCCEEeECCCc
Confidence            34 66776543

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.00  E-value=4.3e-09  Score=75.89  Aligned_cols=129  Identities=16%  Similarity=0.069  Sum_probs=84.3

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..+||++||.++..+                     ..+...|+.+|...+.+.+.+
T Consensus       120 ~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~l  178 (260)
T 2zat_A          120 LHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHP---------------------FPNLGPYNVSKTALLGLTKNL  178 (260)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC---------------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCC---------------------CCCchhHHHHHHHHHHHHHHH
Confidence            5789999988888875    456789999999533221                     124568999999999999887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+.   |+++.+++||.+.++....... . ..........     .....+++++|+|++++.++..+.  ..| .++
T Consensus       179 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~-~~~~~~~~~~-----~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~  251 (260)
T 2zat_A          179 AVELAPRNIRVNCLAPGLIKTNFSQVLWM-D-KARKEYMKES-----LRIRRLGNPEDCAGIVSFLCSEDASYITGETVV  251 (260)
T ss_dssp             HHHHGGGTEEEEEEEECSBCSSTTHHHHS-S-HHHHHHHHHH-----HTCSSCBCGGGGHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHhcccCeEEEEEEECcccCccchhccc-C-hHHHHHHHhc-----CCCCCCCCHHHHHHHHHHHcCcccCCccCCEEE
Confidence            6654   8999999999997653211000 0 0000111000     123458899999999999887543  234 666


Q ss_pred             Ee-cCccC
Q 030406          152 CA-ESVLH  158 (178)
Q Consensus       152 ~~-~~~~s  158 (178)
                      ++ +...+
T Consensus       252 vdgG~~~s  259 (260)
T 2zat_A          252 VGGGTASR  259 (260)
T ss_dssp             ESTTCCCC
T ss_pred             ECCCcccc
Confidence            64 44443

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=98.99  E-value=2.3e-09  Score=78.40  Aligned_cols=123  Identities=13%  Similarity=0.095  Sum_probs=81.4

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..+||++||.++.++.                     .+...|+.+|...+.+.+.+
T Consensus       149 ~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~l  207 (285)
T 2c07_A          149 LRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN---------------------VGQANYSSSKAGVIGFTKSL  207 (285)
T ss_dssp             HHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC---------------------CCCchHHHHHHHHHHHHHHH
Confidence            5789999888877775    4467899999996555431                     13467999999999998887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+   .|+++.++|||.+.++..... .   ...........     ....+++++|+|++++.++..+.  ..| .++
T Consensus       208 a~e~~~~gi~v~~v~Pg~v~t~~~~~~-~---~~~~~~~~~~~-----~~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~  278 (285)
T 2c07_A          208 AKELASRNITVNAIAPGFISSDMTDKI-S---EQIKKNIISNI-----PAGRMGTPEEVANLACFLSSDKSGYINGRVFV  278 (285)
T ss_dssp             HHHHGGGTEEEEEEEECSBCC-----C-C---HHHHHHHHTTC-----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHhCcEEEEEEeCcEecCchhhc-C---HHHHHHHHhhC-----CCCCCCCHHHHHHHHHHHhCCCcCCCCCCEEE
Confidence            655   389999999999987643221 1   11111111111     12347899999999999887542  244 556


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +++
T Consensus       279 v~g  281 (285)
T 2c07_A          279 IDG  281 (285)
T ss_dssp             EST
T ss_pred             eCC
Confidence            654

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=98.99  E-value=5.7e-09  Score=75.12  Aligned_cols=124  Identities=21%  Similarity=0.154  Sum_probs=82.9

Q ss_pred             chhHHHHHHHHHHHHHhC----------CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE   71 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----------~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E   71 (178)
                      +++|+.++.++++++...          +..++|++||.++..+.                     .+...|+.+|...+
T Consensus       113 ~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~  171 (257)
T 3tpc_A          113 VAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ---------------------IGQAAYAASKGGVA  171 (257)
T ss_dssp             HHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC---------------------TTCHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC---------------------CCCcchHHHHHHHH
Confidence            578999999999988752          34689999996554321                     24567999999999


Q ss_pred             HHHHHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC
Q 030406           72 KAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG  148 (178)
Q Consensus        72 ~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~  148 (178)
                      .+.+.++.+   .|+++..++||.+.++.....    ............+    ....+.+++|+|++++.++......|
T Consensus       172 ~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~----~~~~~~~~~~~~p----~~~r~~~~~dva~~v~~l~s~~~itG  243 (257)
T 3tpc_A          172 ALTLPAARELARFGIRVVTIAPGIFDTPMMAGM----PQDVQDALAASVP----FPPRLGRAEEYAALVKHICENTMLNG  243 (257)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBSCC------------------CCSS----SSCSCBCHHHHHHHHHHHHHCTTCCS
T ss_pred             HHHHHHHHHHHHcCeEEEEEEeCCCCChhhccC----CHHHHHHHHhcCC----CCCCCCCHHHHHHHHHHHcccCCcCC
Confidence            998887766   689999999999987642211    0111111111111    11357889999999999998765566


Q ss_pred             -cEEEec
Q 030406          149 -RYLCAE  154 (178)
Q Consensus       149 -~~~~~~  154 (178)
                       .+++.+
T Consensus       244 ~~i~vdG  250 (257)
T 3tpc_A          244 EVIRLDG  250 (257)
T ss_dssp             CEEEEST
T ss_pred             cEEEECC
Confidence             445644

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=98.98  E-value=9.4e-09  Score=74.70  Aligned_cols=123  Identities=15%  Similarity=0.028  Sum_probs=83.8

Q ss_pred             chhHHHHHHHHHHHHHhC---CC------CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KV------RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEK   72 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~------~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~   72 (178)
                      +++|+.++.++++++...   +.      .+||++||..+..+                     ..+...|+.+|...+.
T Consensus       133 ~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asK~a~~~  191 (276)
T 1mxh_A          133 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLP---------------------LPGFCVYTMAKHALGG  191 (276)
T ss_dssp             HHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGGGSC---------------------CTTCHHHHHHHHHHHH
T ss_pred             HHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchhhcCC---------------------CCCCeehHHHHHHHHH
Confidence            578999999999999873   34      79999999644321                     1244679999999999


Q ss_pred             HHHHHHHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CC
Q 030406           73 AAWEEAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--AS  147 (178)
Q Consensus        73 ~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~  147 (178)
                      +.+.++.+.   |+++.+++||.+.++ . . ....  ...... ...+    ..+++++++|+|++++.++..+.  ..
T Consensus       192 l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~-~~~~--~~~~~~-~~~p----~~r~~~~~~dva~~v~~l~s~~~~~~t  261 (276)
T 1mxh_A          192 LTRAAALELAPRHIRVNAVAPGLSLLP-P-A-MPQE--TQEEYR-RKVP----LGQSEASAAQIADAIAFLVSKDAGYIT  261 (276)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEESSBSCC-S-S-SCHH--HHHHHH-TTCT----TTSCCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHhhcCeEEEEEecCcccCC-c-c-CCHH--HHHHHH-hcCC----CCCCCCCHHHHHHHHHHHhCccccCcc
Confidence            998876654   899999999999988 2 1 1111  111222 2111    12338899999999999886532  24


Q ss_pred             C-cEEEecC
Q 030406          148 G-RYLCAES  155 (178)
Q Consensus       148 ~-~~~~~~~  155 (178)
                      | .+++.+.
T Consensus       262 G~~~~vdgG  270 (276)
T 1mxh_A          262 GTTLKVDGG  270 (276)
T ss_dssp             SCEEEESTT
T ss_pred             CcEEEECCc
Confidence            4 5566543

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=98.98  E-value=2.9e-09  Score=77.68  Aligned_cols=132  Identities=15%  Similarity=0.136  Sum_probs=85.3

Q ss_pred             chhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++..    .+ ..+||++||..+..+                     ......|+.+|...+.+.+.
T Consensus       133 ~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~~~~~  191 (280)
T 3pgx_A          133 IGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA---------------------TPGNGHYSASKHGLTALTNT  191 (280)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC---------------------CTTBHHHHHHHHHHHHHHHH
T ss_pred             HhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC---------------------CCCchhHHHHHHHHHHHHHH
Confidence            57899999999998743    23 468999999644322                     12456899999999999888


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHh--CCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLN--GSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-  148 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-  148 (178)
                      ++.+   .|+++..++||.+.++.....  .....+.....  ............+++++|+|++++.++..+.  ..| 
T Consensus       192 la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~  269 (280)
T 3pgx_A          192 LAIELGEYGIRVNSIHPYSVETPMIEPE--AMMEIFARHPSFVHSFPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGT  269 (280)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCSTTCCHH--HHHHHHHHCGGGGGGSCCBTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSC
T ss_pred             HHHHhhhcCeEEEEEeeCcccCcccchh--hhhhhhhcCchhhhhhhhcccCCCCCCCHHHHHHHHHHHhCccccCCCCC
Confidence            7766   689999999999988753221  11111111000  0001111122248999999999999886543  345 


Q ss_pred             cEEEecCc
Q 030406          149 RYLCAESV  156 (178)
Q Consensus       149 ~~~~~~~~  156 (178)
                      .+++.+..
T Consensus       270 ~i~vdGG~  277 (280)
T 3pgx_A          270 QIPVDKGA  277 (280)
T ss_dssp             EEEESTTG
T ss_pred             EEEECCCc
Confidence            55665543

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=98.97  E-value=6e-09  Score=75.99  Aligned_cols=128  Identities=16%  Similarity=0.161  Sum_probs=86.0

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..++|++||..+..+                     ..+...|+.+|...+.+.+.+
T Consensus       127 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asK~a~~~~~~~l  185 (281)
T 3s55_A          127 IGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA---------------------NFAQASYVSSKWGVIGLTKCA  185 (281)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC---------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC---------------------CCCCchhHHHHHHHHHHHHHH
Confidence            5789999999999864    345679999999644321                     124568999999999999988


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCCh----------hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVN----------ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   .|+++..++||.+.++.......          ...........    ........+++++|+|++++.++..+
T Consensus       186 a~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~p~dvA~~v~~L~s~~  261 (281)
T 3s55_A          186 AHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFA----SLHLQYAPFLKPEEVTRAVLFLVDEA  261 (281)
T ss_dssp             HHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHH----HHCSSSCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHH----hhhccCcCCCCHHHHHHHHHHHcCCc
Confidence            775   48999999999999875432100          00000000000    01123367899999999999998764


Q ss_pred             C--CCC-cEEEec
Q 030406          145 S--ASG-RYLCAE  154 (178)
Q Consensus       145 ~--~~~-~~~~~~  154 (178)
                      .  ..| .+++++
T Consensus       262 ~~~itG~~i~vdg  274 (281)
T 3s55_A          262 SSHITGTVLPIDA  274 (281)
T ss_dssp             GTTCCSCEEEEST
T ss_pred             ccCCCCCEEEECC
Confidence            3  234 666744

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=98.97  E-value=5.3e-09  Score=76.67  Aligned_cols=133  Identities=12%  Similarity=-0.031  Sum_probs=83.9

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.|+.++++++.....++||++||.++..+......   ..++.     .+..+...|+.||.+.+.+.+.++.+.
T Consensus       112 ~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~---~~~~~-----~~~~~~~~Y~~sK~a~~~~~~~la~e~  183 (291)
T 3rd5_A          112 IGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLED---LNWRS-----RRYSPWLAYSQSKLANLLFTSELQRRL  183 (291)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSC---TTCSS-----SCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCccc---ccccc-----cCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence            5799999999999999876779999999655443322111   11110     123456789999999999988876654


Q ss_pred             ---C--CcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEE
Q 030406           82 ---G--VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYL  151 (178)
Q Consensus        82 ---~--~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~  151 (178)
                         |  +++..++||.+..+-.... .   ..+......     ....+-...++|+|+.++.++..+...|.|+
T Consensus       184 ~~~g~~i~v~~v~PG~v~T~~~~~~-~---~~~~~~~~~-----~~~~~~~~~~~~~A~~~~~l~~~~~~~G~~~  249 (291)
T 3rd5_A          184 TAAGSPLRALAAHPGYSHTNLQGAS-G---RKLGDALMS-----AATRVVATDADFGARQTLYAASQDLPGDSFV  249 (291)
T ss_dssp             HHTTCCCEEEEECCSGGGSCC-----------------------------CHHHHHHHHHHHHHHHSCCCTTCEE
T ss_pred             hhCCCCEEEEEeeCCCCcccccccc-c---hHHHHHHHH-----HHHHHHhCCHHHHHHHHHHHHcCCCCCCcee
Confidence               4  8899999999965432211 0   001111100     0112233469999999999988876677664

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=98.95  E-value=5.6e-09  Score=75.00  Aligned_cols=148  Identities=15%  Similarity=0.153  Sum_probs=80.4

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCC-CCccCCCCCCchh------hhcccCchHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSP-DDVVDESCWSDLE------FCKNTKNWYCYGKAVA   70 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~-~~~~~E~~~~~~~------~~~~~~~~Y~~sK~~~   70 (178)
                      +++|+.++.++++++.    +.+..+||++||.++..+...... ...+.+.++....      .+..+...|+.+|...
T Consensus        83 ~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~  162 (257)
T 1fjh_A           83 VSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNAL  162 (257)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHH
Confidence            5789999999999886    445689999999544321110000 0000011000000      0112456899999999


Q ss_pred             HHHHHHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--C
Q 030406           71 EKAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--S  145 (178)
Q Consensus        71 E~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~  145 (178)
                      +.+.+.++.+   .|+++.+++||.+.++.........  ........    .......+++++|+|++++.++..+  .
T Consensus       163 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~dvA~~~~~l~~~~~~~  236 (257)
T 1fjh_A          163 TVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP--RYGESIAK----FVPPMGRRAEPSEMASVIAFLMSPAASY  236 (257)
T ss_dssp             HHHHHHTHHHHHHTTCEEEEEEECC---------------------------CCCSTTSCCCTHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccch--hHHHHHHh----cccccCCCCCHHHHHHHHHHHhCchhcC
Confidence            9999877655   5899999999999776422110000  00011100    0111224789999999999998764  3


Q ss_pred             CCC-cEEEecC
Q 030406          146 ASG-RYLCAES  155 (178)
Q Consensus       146 ~~~-~~~~~~~  155 (178)
                      ..| .+.+.+.
T Consensus       237 ~tG~~~~vdgG  247 (257)
T 1fjh_A          237 VHGAQIVIDGG  247 (257)
T ss_dssp             CCSCEEEESTT
T ss_pred             CcCCEEEECCC
Confidence            345 4456543

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=98.94  E-value=4.5e-09  Score=76.18  Aligned_cols=127  Identities=17%  Similarity=0.118  Sum_probs=84.1

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++    ++.+..+||++||.++..+                     ..+...|+.+|...+.+.+.+
T Consensus       122 ~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~l  180 (266)
T 3uxy_A          122 LGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRP---------------------GPGHALYCLTKAALASLTQCM  180 (266)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBC---------------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC---------------------CCCChHHHHHHHHHHHHHHHH
Confidence            578999999999998    4456679999999644321                     124578999999999999887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCCh---hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVN---ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-  148 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-  148 (178)
                      +.+.   |+++..++||.+.++.......   .............     .....+.+++|+|++++.++..+.  ..| 
T Consensus       181 a~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~r~~~pedvA~~v~~L~s~~~~~itG~  255 (266)
T 3uxy_A          181 GMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRT-----VPLGRIAEPEDIADVVLFLASDAARYLCGS  255 (266)
T ss_dssp             HHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTT-----STTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhc-----CCCCCCcCHHHHHHHHHHHhCchhcCCcCC
Confidence            7664   8999999999997653110000   0000011111111     223567899999999999887642  345 


Q ss_pred             cEEEec
Q 030406          149 RYLCAE  154 (178)
Q Consensus       149 ~~~~~~  154 (178)
                      .+++.+
T Consensus       256 ~i~vdG  261 (266)
T 3uxy_A          256 LVEVNG  261 (266)
T ss_dssp             EEEEST
T ss_pred             EEEECc
Confidence            556644

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.94  E-value=7.6e-09  Score=74.75  Aligned_cols=124  Identities=18%  Similarity=0.099  Sum_probs=84.8

Q ss_pred             chhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++...    +..++|++||..+...                    +..+...|+.+|...+.+.+.+
T Consensus       116 ~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~--------------------~~~~~~~Y~asK~a~~~l~~~l  175 (262)
T 3pk0_A          116 FAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPIT--------------------GYPGWSHYGATKAAQLGFMRTA  175 (262)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTB--------------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccC--------------------CCCCChhhHHHHHHHHHHHHHH
Confidence            578999999999888753    6789999999543211                    0124578999999999999988


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+   .|+++..++||.+.++.......   . .........     ....+..++|+|++++.++..+.  ..| .++
T Consensus       176 a~e~~~~gi~vn~v~PG~v~t~~~~~~~~---~-~~~~~~~~~-----p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~  246 (262)
T 3pk0_A          176 AIELAPHKITVNAIMPGNIMTEGLLENGE---E-YIASMARSI-----PAGALGTPEDIGHLAAFLATKEAGYITGQAIA  246 (262)
T ss_dssp             HHHHGGGTCEEEEEEECSBCCHHHHTTCH---H-HHHHHHTTS-----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHhhCcEEEEEEeCcCcCccccccCH---H-HHHHHHhcC-----CCCCCcCHHHHHHHHHHHhCccccCCcCCEEE
Confidence            776   68999999999998764222111   1 111111211     12346789999999999886542  345 556


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       247 vdG  249 (262)
T 3pk0_A          247 VDG  249 (262)
T ss_dssp             EST
T ss_pred             ECC
Confidence            644

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=98.94  E-value=9.6e-09  Score=73.22  Aligned_cols=105  Identities=18%  Similarity=0.189  Sum_probs=77.9

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..+||++||..+..+                     ..+...|+.+|...+.+.+.+
T Consensus       114 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~l  172 (244)
T 2bd0_A          114 MNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA---------------------FRHSSIYCMSKFGQRGLVETM  172 (244)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCC---------------------CCCCchhHHHHHHHHHHHHHH
Confidence            57899999999988853    46689999999543321                     124578999999999998766


Q ss_pred             HH---hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC
Q 030406           78 AV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        78 ~~---~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                      +.   ..|+++.++|||.++++...... .           .      ....+++++|+|++++.++..+.
T Consensus       173 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~-----------~------~~~~~~~~~dva~~~~~l~~~~~  225 (244)
T 2bd0_A          173 RLYARKCNVRITDVQPGAVYTPMWGKVD-D-----------E------MQALMMMPEDIAAPVVQAYLQPS  225 (244)
T ss_dssp             HHHHTTTTEEEEEEEECCBCSTTTCCCC-S-----------T------TGGGSBCHHHHHHHHHHHHTSCT
T ss_pred             HHHhhccCcEEEEEECCCccchhhhhcc-c-----------c------ccccCCCHHHHHHHHHHHHhCCc
Confidence            54   45899999999999987532210 0           0      02368999999999999997653

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=98.94  E-value=8.9e-09  Score=75.17  Aligned_cols=132  Identities=15%  Similarity=0.150  Sum_probs=82.2

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++    ++.+..+||++||.++..+.                     .....|+.+|...+.+.+.+
T Consensus       132 ~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~l  190 (281)
T 3v2h_A          132 IAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVAS---------------------PFKSAYVAAKHGIMGLTKTV  190 (281)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCC---------------------CCchHHHHHHHHHHHHHHHH
Confidence            578999999999987    34456789999996443321                     23467999999999998887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHH--HH-HHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIH--IL-KYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-  148 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-  148 (178)
                      +.+.   |+++..++||.+.++............  .. ..........+.....+++++|+|++++.++..+.  ..| 
T Consensus       191 a~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~  270 (281)
T 3v2h_A          191 ALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAAQITGT  270 (281)
T ss_dssp             HHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSC
T ss_pred             HHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCc
Confidence            6653   799999999999876432211000000  00 00000000112345678999999999999987643  344 


Q ss_pred             cEEEec
Q 030406          149 RYLCAE  154 (178)
Q Consensus       149 ~~~~~~  154 (178)
                      .+++.+
T Consensus       271 ~i~vdG  276 (281)
T 3v2h_A          271 HVSMDG  276 (281)
T ss_dssp             EEEEST
T ss_pred             EEEECC
Confidence            556654

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=98.94  E-value=1.2e-08  Score=73.40  Aligned_cols=125  Identities=11%  Similarity=0.032  Sum_probs=82.4

Q ss_pred             chhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++.+    .+ ..+||++||..+..+                     ..+...|+.+|...+.+.+.
T Consensus       113 ~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~  171 (261)
T 1gee_A          113 IDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP---------------------WPLFVHYAASKGGMKLMTET  171 (261)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHHH
T ss_pred             HHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC---------------------CCCccHHHHHHHHHHHHHHH
Confidence            57899999988877654    34 679999999533221                     13457899999999999887


Q ss_pred             HHHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cE
Q 030406           77 EAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY  150 (178)
Q Consensus        77 ~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~  150 (178)
                      ++.+.   |+++.++||+.++++..... ... ...........     ....+++++|+|++++.++..+  ...| .+
T Consensus       172 la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~-~~~~~~~~~~~-----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  244 (261)
T 1gee_A          172 LALEYAPKGIRVNNIGPGAINTPINAEK-FAD-PEQRADVESMI-----PMGYIGEPEEIAAVAAWLASSEASYVTGITL  244 (261)
T ss_dssp             HHHHHGGGTCEEEEEEECSBCSGGGHHH-HHS-HHHHHHHHTTC-----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHhcccCeEEEEEeeCCcCCchhhhc-ccC-hhHHHHHHhcC-----CCCCCcCHHHHHHHHHHHhCccccCCCCcEE
Confidence            76553   89999999999988642110 000 11111111111     1235789999999999988643  2344 55


Q ss_pred             EEec
Q 030406          151 LCAE  154 (178)
Q Consensus       151 ~~~~  154 (178)
                      ++.+
T Consensus       245 ~v~g  248 (261)
T 1gee_A          245 FADG  248 (261)
T ss_dssp             EEST
T ss_pred             EEcC
Confidence            6654

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=98.93  E-value=1.4e-08  Score=73.29  Aligned_cols=118  Identities=16%  Similarity=0.163  Sum_probs=80.6

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++    ++.+..++|++||.++.++.                     .+...|+.+|...+.+.+.+
T Consensus       109 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  167 (260)
T 1nff_A          109 LDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT---------------------VACHGYTATKFAVRGLTKST  167 (260)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCC---------------------CCchhHHHHHHHHHHHHHHH
Confidence            578999996665554    45567899999995443221                     23467999999999999887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+   .|+++.++|||.++++....  ..          ...  .......+++++|+|++++.++..+.  ..| .++
T Consensus       168 a~e~~~~gi~v~~v~Pg~v~t~~~~~--~~----------~~~--~~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~  233 (260)
T 1nff_A          168 ALELGPSGIRVNSIHPGLVKTPMTDW--VP----------EDI--FQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFV  233 (260)
T ss_dssp             HHHHGGGTEEEEEEEECCBCSGGGTT--SC----------TTC--SCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhCccCcEEEEEEeCCCCCCcccc--ch----------hhH--HhCccCCCCCHHHHHHHHHHHhCccccCCcCCEEE
Confidence            765   58999999999998875220  00          000  01112357899999999999886532  234 566


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       234 v~g  236 (260)
T 1nff_A          234 VDG  236 (260)
T ss_dssp             EST
T ss_pred             ECC
Confidence            644

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=98.93  E-value=8.4e-09  Score=74.43  Aligned_cols=125  Identities=13%  Similarity=0.066  Sum_probs=83.7

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...  +-.+||++||.++..+                     ..+...|+.+|...+.+.+.++.
T Consensus       118 ~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asK~a~~~~~~~la~  176 (261)
T 2wyu_A          118 LEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV---------------------VPKYNVMAIAKAALEASVRYLAY  176 (261)
T ss_dssp             HHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB---------------------CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCC---------------------CCCchHHHHHHHHHHHHHHHHHH
Confidence            578999999999999875  1258999999544321                     12346799999999999988776


Q ss_pred             hc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEEEe
Q 030406           80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLCA  153 (178)
Q Consensus        80 ~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~  153 (178)
                      +.   |+++.+++||.+.++..... . .............     ....+.+++|+|++++.++..+.  ..| .+++.
T Consensus       177 e~~~~gi~v~~v~Pg~v~t~~~~~~-~-~~~~~~~~~~~~~-----p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vd  249 (261)
T 2wyu_A          177 ELGPKGVRVNAISAGPVRTVAARSI-P-GFTKMYDRVAQTA-----PLRRNITQEEVGNLGLFLLSPLASGITGEVVYVD  249 (261)
T ss_dssp             HHGGGTCEEEEEEECCCCCTGGGGC-T-THHHHHHHHHHHS-----TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHhhhCcEEEEEeeCCCcCchhhhc-c-ccHHHHHHHHhcC-----CCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEEC
Confidence            64   89999999999988643221 1 1111111111111     11246789999999999886432  234 56664


Q ss_pred             c
Q 030406          154 E  154 (178)
Q Consensus       154 ~  154 (178)
                      +
T Consensus       250 g  250 (261)
T 2wyu_A          250 A  250 (261)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=98.92  E-value=7.3e-09  Score=74.77  Aligned_cols=125  Identities=12%  Similarity=0.080  Sum_probs=83.6

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++    ++.+..++|++||. ..+...                  +..+...|+.+|...+.+.+.+
T Consensus       115 ~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~-~~~~~~------------------~~~~~~~Y~asKaa~~~~~~~l  175 (264)
T 3i4f_A          115 IQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQ-GADSAP------------------GWIYRSAFAAAKVGLVSLTKTV  175 (264)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCT-TGGGCC------------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHhccHHHHHHHHHHHHHHHhcCCCeEEEEeec-hhcccC------------------CCCCCchhHHHHHHHHHHHHHH
Confidence            578999999999998    55567899999984 222111                  1124578999999999998887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+   .|+++..++||.+.++.....    ...........     .....+.+++|+|++++.++..+.  ..| .++
T Consensus       176 a~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~-----~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~  246 (264)
T 3i4f_A          176 AYEEAEYGITANMVCPGDIIGEMKEAT----IQEARQLKEHN-----TPIGRSGTGEDIARTISFLCEDDSDMITGTIIE  246 (264)
T ss_dssp             HHHHGGGTEEEEEEEECCCCGGGGSCC----HHHHHHC-------------CCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhhhcCcEEEEEccCCccCccchhc----cHHHHHHHhhc-----CCCCCCcCHHHHHHHHHHHcCcccCCCCCcEEE
Confidence            766   689999999999988753332    11111111111     122346789999999999987543  345 556


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +++
T Consensus       247 vdG  249 (264)
T 3i4f_A          247 VTG  249 (264)
T ss_dssp             ESC
T ss_pred             EcC
Confidence            643

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=98.92  E-value=1e-08  Score=73.97  Aligned_cols=124  Identities=19%  Similarity=0.165  Sum_probs=82.0

Q ss_pred             chhHHHHHHHHHHHHHhC----------CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE   71 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----------~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E   71 (178)
                      +++|+.++.++++++...          +..+||++||..+..+.                     .+...|+.+|...+
T Consensus       120 ~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~  178 (265)
T 2o23_A          120 LDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ---------------------VGQAAYSASKGGIV  178 (265)
T ss_dssp             HHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC---------------------TTCHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC---------------------CCCchhHHHHHHHH
Confidence            578999999999988753          56789999995443211                     24567999999999


Q ss_pred             HHHHHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC
Q 030406           72 KAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG  148 (178)
Q Consensus        72 ~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~  148 (178)
                      .+.+.++.+   .|+++.+++||.+.++..... ..   ..........+    ....+++++|+|++++.+++.+...|
T Consensus       179 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~---~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~G  250 (265)
T 2o23_A          179 GMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL-PE---KVCNFLASQVP----FPSRLGDPAEYAHLVQAIIENPFLNG  250 (265)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBCCC--------------CHHHHTCS----SSCSCBCHHHHHHHHHHHHHCTTCCS
T ss_pred             HHHHHHHHHHhhcCcEEEEEEeccccCcccccc-CH---HHHHHHHHcCC----CcCCCCCHHHHHHHHHHHhhcCccCc
Confidence            998877655   489999999999976542211 00   00011111111    11347899999999999998766566


Q ss_pred             -cEEEec
Q 030406          149 -RYLCAE  154 (178)
Q Consensus       149 -~~~~~~  154 (178)
                       .+.+.+
T Consensus       251 ~~i~vdg  257 (265)
T 2o23_A          251 EVIRLDG  257 (265)
T ss_dssp             CEEEEST
T ss_pred             eEEEECC
Confidence             455644

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=98.91  E-value=7.9e-09  Score=73.94  Aligned_cols=124  Identities=15%  Similarity=0.124  Sum_probs=80.6

Q ss_pred             chhHHHHHHHHHHHH----HhCCC-CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++.+++    ++.+. ++||++||..+..+.                     .+...|+.+|...|.+.+.
T Consensus       110 ~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~  168 (251)
T 1zk4_A          110 LAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD---------------------PSLGAYNASKGAVRIMSKS  168 (251)
T ss_dssp             HHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHH
T ss_pred             HHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC---------------------CCCccchHHHHHHHHHHHH
Confidence            578998777665554    45566 799999995443211                     2456899999999999887


Q ss_pred             HHH-----hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-
Q 030406           77 EAV-----ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-  148 (178)
Q Consensus        77 ~~~-----~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-  148 (178)
                      ++.     ..|+++.++||+.++++..... ...  .........     .....+++++|++++++.++..+.  ..| 
T Consensus       169 ~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~-~~~--~~~~~~~~~-----~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  240 (251)
T 1zk4_A          169 AALDCALKDYDVRVNTVHPGYIKTPLVDDL-PGA--EEAMSQRTK-----TPMGHIGEPNDIAYICVYLASNESKFATGS  240 (251)
T ss_dssp             HHHHHHHTTCSEEEEEEEECCBCCHHHHTS-TTH--HHHHTSTTT-----CTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHhcccCCCeEEEEEeeCcCcchhhhhc-Cch--hhhHHHhhc-----CCCCCCcCHHHHHHHHHHHcCcccccccCc
Confidence            655     4589999999999988642211 000  011101111     112358899999999999987542  234 


Q ss_pred             cEEEec
Q 030406          149 RYLCAE  154 (178)
Q Consensus       149 ~~~~~~  154 (178)
                      .+++++
T Consensus       241 ~~~v~g  246 (251)
T 1zk4_A          241 EFVVDG  246 (251)
T ss_dssp             EEEEST
T ss_pred             EEEECC
Confidence            556654

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=98.91  E-value=8.9e-09  Score=74.71  Aligned_cols=125  Identities=17%  Similarity=0.117  Sum_probs=79.4

Q ss_pred             chhHHHHHHHHHHHHHhC-------CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA-------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAA   74 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-------~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~   74 (178)
                      +++|+.++.++++++...       +..+||++||.++.++..                    .....|+.+|...+.+.
T Consensus       133 ~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------~~~~~Y~asKaa~~~~~  192 (272)
T 4e3z_A          133 LRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA--------------------TQYVDYAASKAAIDTFT  192 (272)
T ss_dssp             HHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT--------------------TTCHHHHHHHHHHHHHH
T ss_pred             HhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC--------------------CCcchhHHHHHHHHHHH
Confidence            578999999999888643       346899999965554311                    13356999999999998


Q ss_pred             HHHHHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-
Q 030406           75 WEEAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-  148 (178)
Q Consensus        75 ~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-  148 (178)
                      +.++.+.   |+++..++||.+.++.....   ...........     ......+.+++|+|++++.++..+.  ..| 
T Consensus       193 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~-----~~~~~~~~~~edvA~~i~~l~s~~~~~~tG~  264 (272)
T 4e3z_A          193 IGLAREVAAEGIRVNAVRPGIIETDLHASG---GLPDRAREMAP-----SVPMQRAGMPEEVADAILYLLSPSASYVTGS  264 (272)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBC--------------------------CCTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHcCcEEEEEecCCCcCCccccc---CChHHHHHHhh-----cCCcCCCcCHHHHHHHHHHHhCCccccccCC
Confidence            8877655   89999999999987642221   00001111101     1123346789999999999986542  334 


Q ss_pred             cEEEec
Q 030406          149 RYLCAE  154 (178)
Q Consensus       149 ~~~~~~  154 (178)
                      .+++++
T Consensus       265 ~i~vdg  270 (272)
T 4e3z_A          265 ILNVSG  270 (272)
T ss_dssp             EEEEST
T ss_pred             EEeecC
Confidence            556654

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=98.91  E-value=3.2e-08  Score=71.32  Aligned_cols=125  Identities=14%  Similarity=0.026  Sum_probs=85.1

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..+||++||.++..+                     ..+...|+.+|...+.+.+.+
T Consensus       110 ~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~l  168 (258)
T 3oid_A          110 MNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRY---------------------LENYTTVGVSKAALEALTRYL  168 (258)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSB---------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCC---------------------CCCcHHHHHHHHHHHHHHHHH
Confidence            5789999999998884    445679999999644321                     124578999999999999988


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+.   |+++..++||.+..+....... ............      ....+.+++|+|++++.++..+.  ..| .++
T Consensus       169 a~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~------p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~  241 (258)
T 3oid_A          169 AVELSPKQIIVNAVSGGAIDTDALKHFPN-REDLLEDARQNT------PAGRMVEIKDMVDTVEFLVSSKADMIRGQTII  241 (258)
T ss_dssp             HHHTGGGTEEEEEEEECCBCSGGGGGCTT-HHHHHHHHHHHC------TTSSCBCHHHHHHHHHHHTSSTTTTCCSCEEE
T ss_pred             HHHHhhcCcEEEEEeeCCCcChhhhhccc-CHHHHHHHHhcC------CCCCCcCHHHHHHHHHHHhCcccCCccCCEEE
Confidence            7764   7999999999997764322111 111111111111      23457889999999999987643  345 556


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       242 vdG  244 (258)
T 3oid_A          242 VDG  244 (258)
T ss_dssp             EST
T ss_pred             ECC
Confidence            644

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=98.91  E-value=9.6e-09  Score=74.28  Aligned_cols=125  Identities=15%  Similarity=0.056  Sum_probs=84.0

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...  +-.+||++||.++..+                     ..+...|+.+|...+.+.+.++.
T Consensus       120 ~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~la~  178 (265)
T 1qsg_A          120 HDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA---------------------IPNYNVMGLAKASLEANVRYMAN  178 (265)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB---------------------CTTTTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccC---------------------CCCchHHHHHHHHHHHHHHHHHH
Confidence            578999999999999874  1258999999544321                     12346799999999999988776


Q ss_pred             hc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEEEe
Q 030406           80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLCA  153 (178)
Q Consensus        80 ~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~  153 (178)
                      +.   |+++.+++||.+.++..... . ....+........     ....+.+++|+|++++.++..+.  ..| .+++.
T Consensus       179 e~~~~gi~v~~v~PG~v~t~~~~~~-~-~~~~~~~~~~~~~-----p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vd  251 (265)
T 1qsg_A          179 AMGPEGVRVNAISAGPIRTLAASGI-K-DFRKMLAHCEAVT-----PIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVD  251 (265)
T ss_dssp             HHTTTTEEEEEEEECCCCCTTGGGS-T-THHHHHHHHHHHS-----TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             HhhhcCeEEEEEEeCCCccchhhcc-c-ccHHHHHHHHhcC-----CCCCCCCHHHHHHHHHHHhCchhcCccCCEEEEC
Confidence            64   89999999999988753221 1 1111111111111     11246789999999999886532  234 55664


Q ss_pred             c
Q 030406          154 E  154 (178)
Q Consensus       154 ~  154 (178)
                      +
T Consensus       252 g  252 (265)
T 1qsg_A          252 G  252 (265)
T ss_dssp             T
T ss_pred             C
Confidence            4

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=98.90  E-value=2e-08  Score=72.44  Aligned_cols=126  Identities=13%  Similarity=0.102  Sum_probs=83.3

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..+||++||..+..+                     ..+...|+.+|...+.+.+.+
T Consensus       115 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~l  173 (260)
T 2ae2_A          115 MSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA---------------------VPYEAVYGATKGAMDQLTRCL  173 (260)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC---------------------CCCcchHHHHHHHHHHHHHHH
Confidence            5789999999999884    456789999999543321                     123467999999999999988


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCC--CChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-c
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQS--TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-R  149 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~  149 (178)
                      +.+.   |+++.+++||.+.++....  ........+......      .....+++++|+|++++.++..+  ...| .
T Consensus       174 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~  247 (260)
T 2ae2_A          174 AFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDR------CALRRMGEPKELAAMVAFLCFPAASYVTGQI  247 (260)
T ss_dssp             HHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHT------STTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhc------CCCCCCCCHHHHHHHHHHHcCccccCCCCCE
Confidence            7664   7999999999997653110  000001111111111      12345889999999999888653  2345 5


Q ss_pred             EEEec
Q 030406          150 YLCAE  154 (178)
Q Consensus       150 ~~~~~  154 (178)
                      +++.+
T Consensus       248 ~~vdg  252 (260)
T 2ae2_A          248 IYVDG  252 (260)
T ss_dssp             EEEST
T ss_pred             EEECC
Confidence            56644

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=98.90  E-value=6.7e-09  Score=75.66  Aligned_cols=128  Identities=16%  Similarity=0.108  Sum_probs=83.9

Q ss_pred             chhHHHHHHHHHHHHHhC------CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW   75 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~------~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~   75 (178)
                      +++|+.++.++++++.+.      +..+||++||.++.++.                     .+...|+.+|...+.+.+
T Consensus       127 ~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~  185 (277)
T 2rhc_B          127 VETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV---------------------VHAAPYSASKHGVVGFTK  185 (277)
T ss_dssp             HHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCC---------------------CCCccHHHHHHHHHHHHH
Confidence            578999999999997664      56799999996444321                     244679999999999998


Q ss_pred             HHHHh---cCCcEEEecCCceeCCCCCCCChhh-H------HHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC
Q 030406           76 EEAVA---RGVDLVVVNPVLVLGPLLQSTVNAS-I------IHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        76 ~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                      .++.+   .|+++.+++||.+.++......... .      .........     ......+++++|+|++++.++..+.
T Consensus       186 ~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~p~~r~~~~~dvA~~v~~l~s~~~  260 (277)
T 2rhc_B          186 ALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITA-----RVPIGRYVQPSEVAEMVAYLIGPGA  260 (277)
T ss_dssp             HHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHH-----HSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHh-----cCCCCCCcCHHHHHHHHHHHhCchh
Confidence            87665   4799999999999765311100000 0      000011100     0123458899999999999887542


Q ss_pred             --CCC-cEEEecC
Q 030406          146 --ASG-RYLCAES  155 (178)
Q Consensus       146 --~~~-~~~~~~~  155 (178)
                        ..| .+++.+.
T Consensus       261 ~~~tG~~~~vdGG  273 (277)
T 2rhc_B          261 AAVTAQALNVCGG  273 (277)
T ss_dssp             TTCCSCEEEESTT
T ss_pred             cCCCCcEEEECCC
Confidence              344 5566554

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=98.90  E-value=2.6e-08  Score=72.41  Aligned_cols=125  Identities=11%  Similarity=0.101  Sum_probs=82.3

Q ss_pred             chhHHHH----HHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIG----TKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~----t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.+    +++++..+++.+.++||++||..+..+.                   ...+...|+.+|...|.+++.+
T Consensus       141 ~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------------~~~~~~~Y~~sK~a~~~~~~~l  201 (279)
T 3ctm_A          141 ISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVN-------------------IPQLQAPYNTAKAACTHLAKSL  201 (279)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC----------------------CCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCC-------------------CCCCcccHHHHHHHHHHHHHHH
Confidence            5689999    5677777777778899999995432210                   0134578999999999999988


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~  151 (178)
                      +.+.   + .+.+++|+.+.++-.... ....  ...+....      ....+++++|+|++++.++..+  ...| .++
T Consensus       202 a~e~~~~~-~v~~v~Pg~v~t~~~~~~-~~~~--~~~~~~~~------p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~  271 (279)
T 3ctm_A          202 AIEWAPFA-RVNTISPGYIDTDITDFA-SKDM--KAKWWQLT------PLGREGLTQELVGGYLYLASNASTFTTGSDVV  271 (279)
T ss_dssp             HHHTTTTC-EEEEEEECSBSSTTTSSC-CHHH--HHHHHHHS------TTCSCBCGGGTHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhcccC-CEEEEeccCCcccccccc-ChHH--HHHHHHhC------CccCCcCHHHHHHHHHHHhCccccCccCCEEE
Confidence            7764   5 889999999976643211 1111  11111111      1234789999999999998753  2344 556


Q ss_pred             EecC
Q 030406          152 CAES  155 (178)
Q Consensus       152 ~~~~  155 (178)
                      ++++
T Consensus       272 vdgG  275 (279)
T 3ctm_A          272 IDGG  275 (279)
T ss_dssp             ESTT
T ss_pred             ECCC
Confidence            6543

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=98.89  E-value=1.8e-08  Score=72.39  Aligned_cols=123  Identities=14%  Similarity=0.101  Sum_probs=82.1

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..++|++||.++..+.                     .+...|+.+|.+.+.+.+.+
T Consensus       119 ~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~l  177 (256)
T 3ezl_A          119 IDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ---------------------FGQTNYSTAKAGIHGFTMSL  177 (256)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSC---------------------SCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCC---------------------CCCcccHHHHHHHHHHHHHH
Confidence            5789999888877663    4566799999996554321                     24578999999999998877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~  151 (178)
                      +.+   .|+++..++||.+..+..........   ......      .....+.+++|+|++++.++..+  ...| .++
T Consensus       178 a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~---~~~~~~------~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~  248 (256)
T 3ezl_A          178 AQEVATKGVTVNTVSPGYIGTDMVKAIRPDVL---EKIVAT------IPVRRLGSPDEIGSIVAWLASEESGFSTGADFS  248 (256)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCHHHHTSCHHHH---HHHHHH------STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHhCCEEEEEEECcccCccccccCHHHH---HHHHhc------CCCCCCcCHHHHHHHHHHHhCCcccCCcCcEEE
Confidence            665   57999999999997653221111111   111111      12345778999999999888643  2345 556


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +++
T Consensus       249 vdg  251 (256)
T 3ezl_A          249 LNG  251 (256)
T ss_dssp             EST
T ss_pred             ECC
Confidence            654

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=98.89  E-value=1.4e-08  Score=72.46  Aligned_cols=116  Identities=16%  Similarity=0.135  Sum_probs=73.9

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+ .++|++||..+..+                     ......|+.+|...+.+.+.+
T Consensus       103 ~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~---------------------~~~~~~Y~asK~a~~~~~~~l  160 (245)
T 3e9n_A          103 LDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGP---------------------HPGNTIYAASKHALRGLADAF  160 (245)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC-------------------------------CHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccC---------------------CCCchHHHHHHHHHHHHHHHH
Confidence            5789999888887764    334 68999999544321                     124577999999999999887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLC  152 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~  152 (178)
                      +.+   .|+++.+++||.+.++.....        .... +.    ......+++++|+|++++.+++.+..+..+++
T Consensus       161 a~e~~~~gi~v~~v~PG~v~t~~~~~~--------~~~~-~~----~~~~~~~~~p~dvA~~i~~l~~~~~~~~~~~i  225 (245)
T 3e9n_A          161 RKEEANNGIRVSTVSPGPTNTPMLQGL--------MDSQ-GT----NFRPEIYIEPKEIANAIRFVIDAGETTQITNV  225 (245)
T ss_dssp             HHHHGGGTCEEEEEEECCC-----------------------------CCGGGSCHHHHHHHHHHHHTSCTTEEEEEE
T ss_pred             HHHhhhcCeEEEEEecCCccCchhhhh--------hhhh-hc----ccccccCCCHHHHHHHHHHHHcCCCccceeee
Confidence            765   589999999999976532111        0000 00    01234578999999999999998876666654

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=98.89  E-value=2.5e-08  Score=72.86  Aligned_cols=125  Identities=13%  Similarity=0.038  Sum_probs=83.1

Q ss_pred             chhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.|+.++++++...   +..+||++||.++..+                     ..+...|+.+|...+.+.+.++
T Consensus       131 ~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~la  189 (285)
T 2p91_A          131 MDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKV---------------------VPHYNVMGIAKAALESTVRYLA  189 (285)
T ss_dssp             HHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSB---------------------CTTTTHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccC---------------------CCCccHHHHHHHHHHHHHHHHH
Confidence            578999999999999864   2369999999544321                     1234679999999999998876


Q ss_pred             Hh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEEE
Q 030406           79 VA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLC  152 (178)
Q Consensus        79 ~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~  152 (178)
                      .+   .|+++.+++||.+.++..... . ....+........     ....+.+++|+|++++.++....  ..| .+++
T Consensus       190 ~e~~~~gi~v~~v~PG~v~t~~~~~~-~-~~~~~~~~~~~~~-----p~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~v  262 (285)
T 2p91_A          190 YDIAKHGHRINAISAGPVKTLAAYSI-T-GFHLLMEHTTKVN-----PFGKPITIEDVGDTAVFLCSDWARAITGEVVHV  262 (285)
T ss_dssp             HHHHTTTCEEEEEEECCCCCSCC--C-T-THHHHHHHHHHHS-----TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred             HHhcccCcEEEEEEeCcccCchhhcc-c-chHHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHcCCcccCCCCCEEEE
Confidence            65   389999999999988753221 1 1111111111111     11236789999999999886432  244 5566


Q ss_pred             ec
Q 030406          153 AE  154 (178)
Q Consensus       153 ~~  154 (178)
                      .+
T Consensus       263 dg  264 (285)
T 2p91_A          263 DN  264 (285)
T ss_dssp             ST
T ss_pred             CC
Confidence            44

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=98.89  E-value=2.7e-08  Score=72.07  Aligned_cols=117  Identities=20%  Similarity=0.206  Sum_probs=81.0

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++.    +.+..+||++||.++..+                     ......|+.+|...+.+.+.+
T Consensus       115 ~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~---------------------~~~~~~Y~asK~a~~~~~~~l  173 (266)
T 3p19_A          115 FDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKT---------------------FPDHAAYCGTKFAVHAISENV  173 (266)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCC---------------------CCCCchHHHHHHHHHHHHHHH
Confidence            5789999999777764    456689999999644321                     124467999999999998877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHH-HHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASII-HILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSAS  147 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~  147 (178)
                      +.+   .|+++..++||.+..+........... .+....        .....+++++|+|++++.++..+...
T Consensus       174 a~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--------~~~~r~~~pedvA~av~~l~~~~~~~  239 (266)
T 3p19_A          174 REEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWR--------VDMGGVLAADDVARAVLFAYQQPQNV  239 (266)
T ss_dssp             HHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHH--------HHTTCCBCHHHHHHHHHHHHHSCTTE
T ss_pred             HHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhc--------ccccCCCCHHHHHHHHHHHHcCCCCc
Confidence            665   589999999999987643222111111 111110        01234788999999999999887553

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=98.89  E-value=2.5e-08  Score=72.53  Aligned_cols=134  Identities=13%  Similarity=0.038  Sum_probs=86.3

Q ss_pred             chhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++..    .+ ..+||++||.++.++...                 +..+...|+.+|...+.+.+.
T Consensus       126 ~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------------~~~~~~~Y~asKaa~~~~~~~  188 (278)
T 3sx2_A          126 IDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS-----------------ADPGSVGYVAAKHGVVGLMRV  188 (278)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC-----------------SSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc-----------------CCCCchHhHHHHHHHHHHHHH
Confidence            67899999999998754    22 468999999655443210                 112456799999999999888


Q ss_pred             HHHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHh-CCc-cccC-CCCcccccHHHHHHHHHHhhcCC--CCCC
Q 030406           77 EAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLN-GSA-KTYA-NSVQAYVHVRDVALAHILVYETP--SASG  148 (178)
Q Consensus        77 ~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~-~~~-~~~~-~~~~~~i~v~D~a~~~~~~~~~~--~~~~  148 (178)
                      ++.+.   |+++..++||.+.++.....  .....+..... ... ...+ .....+++++|+|++++.++..+  ...|
T Consensus       189 la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG  266 (278)
T 3sx2_A          189 YANLLAGQMIRVNSIHPSGVETPMINNE--FTREWLAKMAAATDTPGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITG  266 (278)
T ss_dssp             HHHHHGGGTEEEEEEEESCBSSTTTSSH--HHHHHHHHHHHHCC--CTTSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHhccCcEEEEEecCCccCccchhh--hHHHHHhhccchhhhhhhhhhhcCcCcCCHHHHHHHHHHHhCcccccccC
Confidence            76554   69999999999987753321  11111111111 111 1111 11267889999999999988653  2345


Q ss_pred             -cEEEec
Q 030406          149 -RYLCAE  154 (178)
Q Consensus       149 -~~~~~~  154 (178)
                       .+++++
T Consensus       267 ~~i~vdG  273 (278)
T 3sx2_A          267 VTLPVDA  273 (278)
T ss_dssp             CEEEEST
T ss_pred             CEEeECC
Confidence             556654

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.89  E-value=8.6e-09  Score=73.93  Aligned_cols=124  Identities=10%  Similarity=0.088  Sum_probs=80.7

Q ss_pred             chhHHHHHHHHHH----HHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIV----AAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~----~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++.+    .+++.+..+||++||. +.+..                    ..+...|+.+|...+.+.+.+
T Consensus       109 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~~--------------------~~~~~~Y~~sK~a~~~~~~~l  167 (249)
T 1o5i_A          109 IDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSF-SVISP--------------------IENLYTSNSARMALTGFLKTL  167 (249)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG-GGTSC--------------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcch-HhcCC--------------------CCCCchHHHHHHHHHHHHHHH
Confidence            5688888766554    4555567899999995 43311                    124467999999999998877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHH-HHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILK-YLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RY  150 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~  150 (178)
                      +.+   .|+++.+++||.+.++...... .   .... ......     ....+++++|+|++++.++..+.  ..| .+
T Consensus       168 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~---~~~~~~~~~~~-----p~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~  238 (249)
T 1o5i_A          168 SFEVAPYGITVNCVAPGWTETERVKELL-S---EEKKKQVESQI-----PMRRMAKPEEIASVVAFLCSEKASYLTGQTI  238 (249)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCTTHHHHS-C---HHHHHHHHTTS-----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHhhhcCeEEEEEeeCCCccCcccccc-h---hhHHHHHHhcC-----CCCCCcCHHHHHHHHHHHcCccccCCCCCEE
Confidence            654   5899999999999876421100 0   0111 111111     12457899999999998886532  334 55


Q ss_pred             EEecC
Q 030406          151 LCAES  155 (178)
Q Consensus       151 ~~~~~  155 (178)
                      ++.+.
T Consensus       239 ~vdgG  243 (249)
T 1o5i_A          239 VVDGG  243 (249)
T ss_dssp             EESTT
T ss_pred             EECCC
Confidence            66543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=98.88  E-value=1.7e-08  Score=72.95  Aligned_cols=128  Identities=19%  Similarity=0.122  Sum_probs=83.7

Q ss_pred             chhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCC-------CCccCCCCCCch-------------hhhccc
Q 030406            2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSP-------DDVVDESCWSDL-------------EFCKNT   59 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~--~~~~i~~Ss~~~~~~~~~~~~-------~~~~~E~~~~~~-------------~~~~~~   59 (178)
                      +++|+.++.++++++.+.-  ..+||++||..+.++.....+       ...++|+++...             ..+..|
T Consensus       110 ~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  189 (276)
T 1wma_A          110 MKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWP  189 (276)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCC
T ss_pred             hheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCc
Confidence            5789999999999998752  248999999655543111000       001222211000             001124


Q ss_pred             CchHHHHHHHHHHHHHHHHHh-------cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHH
Q 030406           60 KNWYCYGKAVAEKAAWEEAVA-------RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRD  132 (178)
Q Consensus        60 ~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  132 (178)
                      .+.|+.+|...|.+++.++.+       .|+++.+++||.+.++-...                        ..+++++|
T Consensus       190 ~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~------------------------~~~~~~~~  245 (276)
T 1wma_A          190 SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP------------------------KATKSPEE  245 (276)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT------------------------TCSBCHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc------------------------cccCChhH
Confidence            588999999999998887665       58999999999986543110                        24689999


Q ss_pred             HHHHHHHhhcCCC----CCCcEEEe
Q 030406          133 VALAHILVYETPS----ASGRYLCA  153 (178)
Q Consensus       133 ~a~~~~~~~~~~~----~~~~~~~~  153 (178)
                      +|++++.++..+.    ..|.|+..
T Consensus       246 ~a~~~~~l~~~~~~~~~~~G~~~~~  270 (276)
T 1wma_A          246 GAETPVYLALLPPDAEGPHGQFVSE  270 (276)
T ss_dssp             HTHHHHHHHSCCTTCCCCCSCEEET
T ss_pred             hhhhHhhhhcCcccccccCceEecc
Confidence            9999999997542    35555543

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=98.87  E-value=2.4e-08  Score=71.61  Aligned_cols=130  Identities=13%  Similarity=0.066  Sum_probs=75.5

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++    ++.+..++|++||.++..+                     ..+...|+.+|...+.+.+.+
T Consensus       102 ~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~l  160 (250)
T 2fwm_X          102 FAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTP---------------------RIGMSAYGASKAALKSLALSV  160 (250)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC---------------------CCCCchHHHHHHHHHHHHHHH
Confidence            578999999999888    4456789999999543321                     124567999999999999887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHH-HHhCCcccc--CCCCcccccHHHHHHHHHHhhcCC--CCCC-
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILK-YLNGSAKTY--ANSVQAYVHVRDVALAHILVYETP--SASG-  148 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-  148 (178)
                      +.+   .|+++.++|||.+.++........  ..... ........+  ......+.+++|+|++++.++..+  ...| 
T Consensus       161 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~  238 (250)
T 2fwm_X          161 GLELAGSGVRCNVVSPGSTDTDMQRTLWVS--DDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQ  238 (250)
T ss_dssp             HHHHGGGTCEEEEEEECCC--------------------------------------CHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHhCccCCEEEEEECCcccCccccccccC--hhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhCccccCCCCC
Confidence            665   489999999999987643211000  00000 000000000  011224789999999999988764  2345 


Q ss_pred             cEEEec
Q 030406          149 RYLCAE  154 (178)
Q Consensus       149 ~~~~~~  154 (178)
                      .+.+.+
T Consensus       239 ~i~vdG  244 (250)
T 2fwm_X          239 DIVVDG  244 (250)
T ss_dssp             EEEEST
T ss_pred             EEEECC
Confidence            445644

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=98.87  E-value=1.5e-08  Score=73.65  Aligned_cols=125  Identities=11%  Similarity=0.025  Sum_probs=84.0

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++.    +.+..+||++||..+..+                     ..+...|+.+|...+.+.+.+
T Consensus       134 ~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~l  192 (273)
T 3uf0_A          134 LTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQG---------------------GRNVAAYAASKHAVVGLTRAL  192 (273)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---------------------CSSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCC---------------------CCCChhHHHHHHHHHHHHHHH
Confidence            5789999999999874    346679999999644321                     124568999999999999887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~  151 (178)
                      +.+   .|+++..++||.+.++..... ..............      ....+..++|+|++++.++..+  ...| .++
T Consensus       193 a~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~------p~~r~~~pedva~~v~~L~s~~a~~itG~~i~  265 (273)
T 3uf0_A          193 ASEWAGRGVGVNALAPGYVVTANTAAL-RADDERAAEITARI------PAGRWATPEDMVGPAVFLASDAASYVHGQVLA  265 (273)
T ss_dssp             HHHHGGGTEEEEEEEECSBCSGGGHHH-HTSHHHHHHHHHHS------TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHhhcCcEEEEEEeCCCcCCchhhc-ccCHHHHHHHHhcC------CCCCCCCHHHHHHHHHHHhCchhcCCcCCEEE
Confidence            766   689999999999987642110 00001111111111      2345778999999999988753  2345 556


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +++
T Consensus       266 vdG  268 (273)
T 3uf0_A          266 VDG  268 (273)
T ss_dssp             EST
T ss_pred             ECc
Confidence            644

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=98.86  E-value=1.1e-07  Score=68.37  Aligned_cols=128  Identities=13%  Similarity=0.058  Sum_probs=83.8

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..++|++||..+..+                     ..+...|+.+|...+.+.+.+
T Consensus       101 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~l  159 (254)
T 1zmt_A          101 VEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP---------------------WKELSTYTSARAGACTLANAL  159 (254)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC---------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccC---------------------CCCchHHHHHHHHHHHHHHHH
Confidence            5789999999988875    345679999999544321                     124467999999999998887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhH----HHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASI----IHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG  148 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~  148 (178)
                      +.+   .|+.+.+++||.++|+.........+    ..........     .....+.+++|+|++++.++..+.  ..|
T Consensus       160 a~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~-----~p~~~~~~p~dvA~~v~~l~s~~~~~~tG  234 (254)
T 1zmt_A          160 SKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKV-----TALQRLGTQKELGELVAFLASGSCDYLTG  234 (254)
T ss_dssp             HHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHH-----SSSSSCBCHHHHHHHHHHHHTTSCGGGTT
T ss_pred             HHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhcc-----CCCCCCcCHHHHHHHHHHHhCcccCCccC
Confidence            665   38999999999998875332211110    0011111000     011236789999999999987643  244


Q ss_pred             -cEEEecC
Q 030406          149 -RYLCAES  155 (178)
Q Consensus       149 -~~~~~~~  155 (178)
                       .+.+.+.
T Consensus       235 ~~~~vdgG  242 (254)
T 1zmt_A          235 QVFWLAGG  242 (254)
T ss_dssp             CEEEESTT
T ss_pred             CEEEECCC
Confidence             4456543

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=98.86  E-value=6e-08  Score=70.15  Aligned_cols=123  Identities=13%  Similarity=0.058  Sum_probs=84.4

Q ss_pred             chhHHHHHHHHHHHHH-----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA-----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~-----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++.     +.+..++|++||.++.++.                     .+...|+.+|.+.+.+.+.
T Consensus       132 ~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~~~~~  190 (267)
T 4iiu_A          132 IHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN---------------------RGQVNYSAAKAGIIGATKA  190 (267)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC---------------------TTCHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC---------------------CCCchhHHHHHHHHHHHHH
Confidence            5789999999999874     4556799999996555431                     2456799999988888777


Q ss_pred             HHHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cE
Q 030406           77 EAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY  150 (178)
Q Consensus        77 ~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~  150 (178)
                      ++.+.   |+++..++||.+..+.....    ...........      ....+.+++|+|++++.++..+  ...| .+
T Consensus       191 la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~------p~~~~~~~edva~~~~~L~s~~~~~itG~~i  260 (267)
T 4iiu_A          191 LAIELAKRKITVNCIAPGLIDTGMIEME----ESALKEAMSMI------PMKRMGQAEEVAGLASYLMSDIAGYVTRQVI  260 (267)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCSTTCCCC----HHHHHHHHHTC------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHhhcCeEEEEEEEeeecCCccccc----HHHHHHHHhcC------CCCCCcCHHHHHHHHHHHhCCcccCccCCEE
Confidence            66554   89999999999987653321    11112222221      2234678999999999988753  2345 55


Q ss_pred             EEecC
Q 030406          151 LCAES  155 (178)
Q Consensus       151 ~~~~~  155 (178)
                      +++++
T Consensus       261 ~vdGG  265 (267)
T 4iiu_A          261 SINGG  265 (267)
T ss_dssp             EESTT
T ss_pred             EeCCC
Confidence            66554

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=98.85  E-value=3.3e-08  Score=71.03  Aligned_cols=126  Identities=13%  Similarity=0.080  Sum_probs=81.5

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++    ++.+..+||++||.++..+.                     .+...|+.+|...+.+.+.+
T Consensus       107 ~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  165 (255)
T 2q2v_A          107 IALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGS---------------------TGKAAYVAAKHGVVGLTKVV  165 (255)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC---------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCC---------------------CCchhHHHHHHHHHHHHHHH
Confidence            578998776666554    56677899999996443211                     23467999999999999988


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHH---H----HHH-hCCccccCCCCcccccHHHHHHHHHHhhcCCC-
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHI---L----KYL-NGSAKTYANSVQAYVHVRDVALAHILVYETPS-  145 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~---~----~~~-~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-  145 (178)
                      +.+   .|+++.+++||.+.++..... .......   .    ... ..     ......+++++|+|++++.++..+. 
T Consensus       166 a~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~p~~~~~~~~dvA~~~~~l~s~~~~  239 (255)
T 2q2v_A          166 GLETATSNVTCNAICPGWVLTPLVQKQ-IDDRAANGGDPLQAQHDLLAE-----KQPSLAFVTPEHLGELVLFLCSEAGS  239 (255)
T ss_dssp             HHHTTTSSEEEEEEEESSBCCHHHHHH-HHHHHHHTCCHHHHHHHHHTT-----TCTTCCCBCHHHHHHHHHHHTSGGGT
T ss_pred             HHHhcccCcEEEEEeeCCCcCcchhhh-cccccccccchHHHHHHHHhc-----cCCCCCCcCHHHHHHHHHHHhCCccC
Confidence            766   479999999999987642110 0000000   0    111 11     1123468999999999998886542 


Q ss_pred             -CCC-cEEEec
Q 030406          146 -ASG-RYLCAE  154 (178)
Q Consensus       146 -~~~-~~~~~~  154 (178)
                       ..| .+++.+
T Consensus       240 ~~tG~~~~vdg  250 (255)
T 2q2v_A          240 QVRGAAWNVDG  250 (255)
T ss_dssp             TCCSCEEEEST
T ss_pred             CCCCCEEEECC
Confidence             234 556654

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.85  E-value=2.3e-08  Score=71.92  Aligned_cols=124  Identities=11%  Similarity=0.100  Sum_probs=82.1

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..++|++||.++.++.                     .+...|+.+|...+.+.+.+
T Consensus       105 ~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  163 (256)
T 2d1y_A          105 LEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE---------------------QENAAYNASKGGLVNLTRSL  163 (256)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC---------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC---------------------CCChhHHHHHHHHHHHHHHH
Confidence            57899999999888753    467899999996444321                     23467999999999999887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHH-HHH-hCCc-cc--cCCCCcccccHHHHHHHHHHhhcCCC--CC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHIL-KYL-NGSA-KT--YANSVQAYVHVRDVALAHILVYETPS--AS  147 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~-~~~-~~~~-~~--~~~~~~~~i~v~D~a~~~~~~~~~~~--~~  147 (178)
                      +.+   .|+++.+++||.+.++..        .... ... .... ..  .......+++++|+|++++.++..+.  ..
T Consensus       164 a~e~~~~gi~v~~v~Pg~v~t~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~  235 (256)
T 2d1y_A          164 ALDLAPLRIRVNAVAPGAIATEAV--------LEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFIT  235 (256)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCHHH--------HHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHhhcCeEEEEEeeCCccCchh--------hhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCC
Confidence            665   379999999999865421        0000 000 0000 00  01123568999999999999887642  34


Q ss_pred             C-cEEEec
Q 030406          148 G-RYLCAE  154 (178)
Q Consensus       148 ~-~~~~~~  154 (178)
                      | .+++.+
T Consensus       236 G~~~~v~g  243 (256)
T 2d1y_A          236 GAILPVDG  243 (256)
T ss_dssp             SCEEEEST
T ss_pred             CCEEEECC
Confidence            4 566644

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=98.85  E-value=2.8e-08  Score=70.99  Aligned_cols=123  Identities=12%  Similarity=0.120  Sum_probs=84.4

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..++|++||..+..+.                     .....|+.+|...+.+.+.+
T Consensus       110 ~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  168 (247)
T 3lyl_A          110 INTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGN---------------------PGQTNYCAAKAGVIGFSKSL  168 (247)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC---------------------CCcHHHHHHHHHHHHHHHHH
Confidence            57899999999988754    345699999996554321                     24567999999999998877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+   .|+++..++||.+..+...... .   .........     .....+.+++|+|++++.++..+.  ..| .++
T Consensus       169 a~e~~~~gi~v~~v~PG~v~t~~~~~~~-~---~~~~~~~~~-----~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~  239 (247)
T 3lyl_A          169 AYEVASRNITVNVVAPGFIATDMTDKLT-D---EQKSFIATK-----IPSGQIGEPKDIAAAVAFLASEEAKYITGQTLH  239 (247)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCTTTTTSC-H---HHHHHHHTT-----STTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHcCeEEEEEeeCcEecccchhcc-H---HHHHHHhhc-----CCCCCCcCHHHHHHHHHHHhCCCcCCccCCEEE
Confidence            665   4899999999999776433211 1   111222221     133568899999999999886542  244 556


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +++
T Consensus       240 vdg  242 (247)
T 3lyl_A          240 VNG  242 (247)
T ss_dssp             EST
T ss_pred             ECC
Confidence            654

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=98.85  E-value=4.6e-08  Score=70.42  Aligned_cols=126  Identities=11%  Similarity=-0.066  Sum_probs=82.1

Q ss_pred             chhHHHHHHHHHHHH-----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA-----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~-----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++     ++.+..++|++||..+..+                     ......|+.+|...+.+.+.
T Consensus       111 ~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~  169 (257)
T 3imf_A          111 INIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDA---------------------GPGVIHSAAAKAGVLAMTKT  169 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSC---------------------CTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccC---------------------CCCcHHHHHHHHHHHHHHHH
Confidence            578999999999988     3444679999999644321                     12446799999999999887


Q ss_pred             HHH----hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-c
Q 030406           77 EAV----ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-R  149 (178)
Q Consensus        77 ~~~----~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~  149 (178)
                      ++.    ..|+++..++||.+.++....... ....+.......     .....+..++|+|++++.++..+.  ..| .
T Consensus       170 la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~-----~p~~r~~~pedvA~~v~~L~s~~~~~itG~~  243 (257)
T 3imf_A          170 LAVEWGRKYGIRVNAIAPGPIERTGGADKLW-ISEEMAKRTIQS-----VPLGRLGTPEEIAGLAYYLCSDEAAYINGTC  243 (257)
T ss_dssp             HHHHHHHHHCCEEEEEEECCBSSCCCC--------CCSHHHHTT-----STTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHhccccCeEEEEEEECCCcCCcchhhcc-cCHHHHHHHHhc-----CCCCCCcCHHHHHHHHHHHcCchhcCccCCE
Confidence            664    448999999999998764322100 000000111111     122357889999999999887543  345 5


Q ss_pred             EEEec
Q 030406          150 YLCAE  154 (178)
Q Consensus       150 ~~~~~  154 (178)
                      +++.+
T Consensus       244 i~vdG  248 (257)
T 3imf_A          244 MTMDG  248 (257)
T ss_dssp             EEEST
T ss_pred             EEECC
Confidence            56644

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=98.85  E-value=2.8e-08  Score=71.17  Aligned_cols=124  Identities=15%  Similarity=0.111  Sum_probs=84.2

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++..    .+..++|++||.++.++.                     .+...|+.+|...+.+.+.+
T Consensus       111 ~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~l~~~l  169 (248)
T 3op4_A          111 METNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN---------------------AGQANYAAAKAGVIGFTKSM  169 (248)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC---------------------CCChHHHHHHHHHHHHHHHH
Confidence            57899999999998754    456799999996555421                     24567999999999988877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+   .|+++..++||.+..+-.......   .........      ....+.+++|+|++++.++..+.  ..| .++
T Consensus       170 a~e~~~~gi~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~------p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~  240 (248)
T 3op4_A          170 AREVASRGVTVNTVAPGFIETDMTKALNDE---QRTATLAQV------PAGRLGDPREIASAVAFLASPEAAYITGETLH  240 (248)
T ss_dssp             HHHHGGGTEEEEEEEECSBSSTTTTTSCHH---HHHHHHHTC------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHhCeEEEEEeeCCCCCchhhhcCHH---HHHHHHhcC------CCCCCcCHHHHHHHHHHHcCCccCCccCcEEE
Confidence            664   489999999999976543221111   111111111      23457899999999998886542  245 556


Q ss_pred             EecC
Q 030406          152 CAES  155 (178)
Q Consensus       152 ~~~~  155 (178)
                      +.+.
T Consensus       241 vdgG  244 (248)
T 3op4_A          241 VNGG  244 (248)
T ss_dssp             ESTT
T ss_pred             ECCC
Confidence            6543

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=98.85  E-value=1.8e-08  Score=74.07  Aligned_cols=123  Identities=19%  Similarity=0.117  Sum_probs=83.4

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEecccccc-ccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAV-YMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~-~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.|+.++++++.    +.+..+||++||..+. ++                     ......|+.+|...+.+.+.
T Consensus       147 ~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~  205 (293)
T 3rih_A          147 LDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTG---------------------YPGWSHYGASKAAQLGFMRT  205 (293)
T ss_dssp             HHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBB---------------------CTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCC---------------------CCCCHHHHHHHHHHHHHHHH
Confidence            5789999999999884    4566899999995432 21                     12457899999999999988


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cE
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY  150 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~  150 (178)
                      ++.+   .|+++..++||.+.++......    ...........     ...-+..++|++++++.++...  ...| .+
T Consensus       206 la~e~~~~gI~vn~v~PG~v~t~~~~~~~----~~~~~~~~~~~-----p~~r~~~p~dvA~~v~fL~s~~a~~itG~~i  276 (293)
T 3rih_A          206 AAIELAPRGVTVNAILPGNILTEGLVDMG----EEYISGMARSI-----PMGMLGSPVDIGHLAAFLATDEAGYITGQAI  276 (293)
T ss_dssp             HHHHHGGGTCEEEEEEECSBCCHHHHHTC----HHHHHHHHTTS-----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHhhhCeEEEEEecCCCcCcchhhcc----HHHHHHHHhcC-----CCCCCCCHHHHHHHHHHHhCccccCCCCCEE
Confidence            7765   5899999999999876421110    11112111211     1223567999999999988653  2345 55


Q ss_pred             EEec
Q 030406          151 LCAE  154 (178)
Q Consensus       151 ~~~~  154 (178)
                      ++.+
T Consensus       277 ~vdG  280 (293)
T 3rih_A          277 VVDG  280 (293)
T ss_dssp             EEST
T ss_pred             EECC
Confidence            6644

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=98.84  E-value=1.5e-08  Score=73.14  Aligned_cols=127  Identities=13%  Similarity=-0.017  Sum_probs=82.9

Q ss_pred             chhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++.+    .+ ..++|++||..+..+                     ..+...|+.+|...+.+.+.
T Consensus       114 ~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~  172 (263)
T 3ak4_A          114 FDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG---------------------APLLAHYSASKFAVFGWTQA  172 (263)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC---------------------CCCchhHHHHHHHHHHHHHH
Confidence            57899999999888764    34 579999999543321                     02346799999999999888


Q ss_pred             HHHhc---CCcEEEecCCceeCCCCCCCChh---h----HHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--
Q 030406           77 EAVAR---GVDLVVVNPVLVLGPLLQSTVNA---S----IIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--  144 (178)
Q Consensus        77 ~~~~~---~~~~~i~R~~~v~G~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--  144 (178)
                      ++.+.   |+++.++||+.++++........   .    ...........     .....+++++|+|++++.++..+  
T Consensus       173 la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~~~~~~~dvA~~v~~l~s~~~~  247 (263)
T 3ak4_A          173 LAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSL-----TPLGRIEEPEDVADVVVFLASDAAR  247 (263)
T ss_dssp             HHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHT-----CTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhc-----CCCCCCcCHHHHHHHHHHHhCcccc
Confidence            76653   89999999999987531110000   0    00111111111     12345889999999999998754  


Q ss_pred             CCCC-cEEEec
Q 030406          145 SASG-RYLCAE  154 (178)
Q Consensus       145 ~~~~-~~~~~~  154 (178)
                      ...| .+++.+
T Consensus       248 ~~tG~~~~vdg  258 (263)
T 3ak4_A          248 FMTGQGINVTG  258 (263)
T ss_dssp             TCCSCEEEESS
T ss_pred             CCCCCEEEECc
Confidence            2344 566654

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=98.84  E-value=5.3e-08  Score=70.28  Aligned_cols=121  Identities=12%  Similarity=0.037  Sum_probs=80.1

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..+||++||..+..+                     ..+...|+.+|...+.+.+.+
T Consensus       126 ~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~l  184 (260)
T 3gem_A          126 FSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKG---------------------SSKHIAYCATKAGLESLTLSF  184 (260)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTC---------------------CSSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC---------------------CCCcHhHHHHHHHHHHHHHHH
Confidence            57899999999988853    45679999999644332                     124568999999999999988


Q ss_pred             HHhc--CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC-cEEEec
Q 030406           78 AVAR--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCAE  154 (178)
Q Consensus        78 ~~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~  154 (178)
                      +.+.  ++++..++||.+..+.....  ..   .......      ....-+..++|+|++++.+++.....| .+++++
T Consensus       185 a~e~~~~Irvn~v~PG~v~t~~~~~~--~~---~~~~~~~------~p~~r~~~~edva~~v~~L~~~~~itG~~i~vdG  253 (260)
T 3gem_A          185 AARFAPLVKVNGIAPALLMFQPKDDA--AY---RANALAK------SALGIEPGAEVIYQSLRYLLDSTYVTGTTLTVNG  253 (260)
T ss_dssp             HHHHTTTCEEEEEEECTTCC--------------------------CCSCCCCCTHHHHHHHHHHHHCSSCCSCEEEEST
T ss_pred             HHHHCCCCEEEEEeecccccCCCCCH--HH---HHHHHhc------CCCCCCCCHHHHHHHHHHHhhCCCCCCCEEEECC
Confidence            7765  48899999999976532110  00   0111111      112235568999999999997666666 556644

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=98.84  E-value=2.1e-08  Score=72.23  Aligned_cols=128  Identities=15%  Similarity=0.109  Sum_probs=85.1

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..+||++||..+..+                     ..+...|+.+|...+.+.+.+
T Consensus       116 ~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~~~~~l  174 (256)
T 3gaf_A          116 FKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENT---------------------NVRMASYGSSKAAVNHLTRNI  174 (256)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCC---------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCC---------------------CCCchHHHHHHHHHHHHHHHH
Confidence            5789999999999874    455679999999644321                     124578999999999999887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~  151 (178)
                      +.+   .|+++..++||.+..+......   ...........     .....+.+++|+|++++.++...  ...| .++
T Consensus       175 a~e~~~~gi~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~-----~p~~r~~~~~dva~~~~~L~s~~~~~itG~~i~  246 (256)
T 3gaf_A          175 AFDVGPMGIRVNAIAPGAIKTDALATVL---TPEIERAMLKH-----TPLGRLGEAQDIANAALFLCSPAAAWISGQVLT  246 (256)
T ss_dssp             HHHHGGGTEEEEEEEECCBCCHHHHHHC---CHHHHHHHHTT-----CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHhhhCcEEEEEEEccccCchhhhcc---CHHHHHHHHhc-----CCCCCCCCHHHHHHHHHHHcCCcccCccCCEEE
Confidence            766   3799999999999765311100   01111111111     12345788999999999988653  2345 566


Q ss_pred             Eec-CccC
Q 030406          152 CAE-SVLH  158 (178)
Q Consensus       152 ~~~-~~~s  158 (178)
                      +++ ...+
T Consensus       247 vdgG~~~~  254 (256)
T 3gaf_A          247 VSGGGVQE  254 (256)
T ss_dssp             ESTTSCCC
T ss_pred             ECCCcccc
Confidence            744 3443

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=98.84  E-value=3.8e-08  Score=70.34  Aligned_cols=123  Identities=15%  Similarity=0.137  Sum_probs=80.7

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..+||++||.++.++.                     .....|+.+|...+.+.+.+
T Consensus       110 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~l  168 (246)
T 2uvd_A          110 INTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN---------------------PGQANYVAAKAGVIGLTKTS  168 (246)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC---------------------CCCchHHHHHHHHHHHHHHH
Confidence            5789999777766654    4567899999996554431                     13467999999999988776


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+   .|+++.+++||.+.++..... .....  .......      ....+++++|+|++++.++..+.  ..| .+.
T Consensus       169 a~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~--~~~~~~~------p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~  239 (246)
T 2uvd_A          169 AKELASRNITVNAIAPGFIATDMTDVL-DENIK--AEMLKLI------PAAQFGEAQDIANAVTFFASDQSKYITGQTLN  239 (246)
T ss_dssp             HHHHGGGTEEEEEEEECSBGGGCSSCC-CTTHH--HHHHHTC------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhhhcCeEEEEEEeccccCcchhhc-CHHHH--HHHHhcC------CCCCCcCHHHHHHHHHHHcCchhcCCCCCEEE
Confidence            544   489999999999976542221 11111  1111111      12347899999999999886532  344 555


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       240 vdg  242 (246)
T 2uvd_A          240 VDG  242 (246)
T ss_dssp             EST
T ss_pred             ECc
Confidence            644

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=98.83  E-value=3.5e-08  Score=71.62  Aligned_cols=126  Identities=13%  Similarity=0.151  Sum_probs=79.6

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..+||++||.++..+                     ..+...|+.+|...+.+.+.+
T Consensus       127 ~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asK~a~~~~~~~l  185 (273)
T 1ae1_A          127 MGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA---------------------LPSVSLYSASKGAINQMTKSL  185 (273)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCC---------------------CCCcchhHHHHHHHHHHHHHH
Confidence            5689999999999884    345679999999543321                     124468999999999998887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChh---hHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNA---SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-  148 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-  148 (178)
                      +.+.   |+++.+++||.+.++........   ............      ....+.+++|+|++++.++..+  ...| 
T Consensus       186 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------p~~r~~~p~dvA~~v~~l~s~~~~~~tG~  259 (273)
T 1ae1_A          186 ACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT------PMGRAGKPQEVSALIAFLCFPAASYITGQ  259 (273)
T ss_dssp             HHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHS------TTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcC------CCCCCcCHHHHHHHHHHHhCccccCcCCC
Confidence            6654   89999999999988753221000   001111111111      1224789999999999888643  2245 


Q ss_pred             cEEEec
Q 030406          149 RYLCAE  154 (178)
Q Consensus       149 ~~~~~~  154 (178)
                      .+.+.+
T Consensus       260 ~i~vdG  265 (273)
T 1ae1_A          260 IIWADG  265 (273)
T ss_dssp             EEEEST
T ss_pred             EEEECC
Confidence            555644

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=98.83  E-value=9.9e-09  Score=73.69  Aligned_cols=123  Identities=14%  Similarity=0.071  Sum_probs=81.6

Q ss_pred             chhHHHHHHHHHHHHHhC----C---CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----K---VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAA   74 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~---~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~   74 (178)
                      +++|+.++.++++++...    +   ..++|++||.++..+                     ......|+.+|...+.+.
T Consensus       104 ~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~  162 (254)
T 1sby_A          104 IAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA---------------------IHQVPVYSASKAAVVSFT  162 (254)
T ss_dssp             HHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC---------------------CTTSHHHHHHHHHHHHHH
T ss_pred             heeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccC---------------------CCCchHHHHHHHHHHHHH
Confidence            578999999999988642    1   357999999543321                     123467999999999999


Q ss_pred             HHHHHh---cCCcEEEecCCceeCCCCCCCCh--hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCc
Q 030406           75 WEEAVA---RGVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGR  149 (178)
Q Consensus        75 ~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~  149 (178)
                      +.++.+   .|+++.+++||.+.++.......  .....+....         ....+.+++|+|++++.+++....+..
T Consensus       163 ~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dvA~~i~~~~~~~~~G~~  233 (254)
T 1sby_A          163 NSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL---------LSHPTQTSEQCGQNFVKAIEANKNGAI  233 (254)
T ss_dssp             HHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH---------TTSCCEEHHHHHHHHHHHHHHCCTTCE
T ss_pred             HHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHH---------hcCCCCCHHHHHHHHHHHHHcCCCCCE
Confidence            887665   68999999999998753211000  0000011111         112345899999999999875544446


Q ss_pred             EEEec
Q 030406          150 YLCAE  154 (178)
Q Consensus       150 ~~~~~  154 (178)
                      |++.+
T Consensus       234 ~~v~g  238 (254)
T 1sby_A          234 WKLDL  238 (254)
T ss_dssp             EEEET
T ss_pred             EEEeC
Confidence            77754

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=98.83  E-value=3.9e-08  Score=72.01  Aligned_cols=115  Identities=14%  Similarity=0.075  Sum_probs=78.7

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++.    +.+..+||++||.++..+                     ......|+.+|...+.+.+.+
T Consensus       144 ~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~l  202 (287)
T 3rku_A          144 FDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDA---------------------YPTGSIYCASKFAVGAFTDSL  202 (287)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCC---------------------CCCCchHHHHHHHHHHHHHHH
Confidence            6789999999999884    446679999999654322                     124467999999999999988


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA  146 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  146 (178)
                      +.+   .|+++..++||.+..+-..................         ...+.++|+|++++.++..+..
T Consensus       203 a~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~---------~~p~~pedvA~~v~~l~s~~~~  265 (287)
T 3rku_A          203 RKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKD---------TTPLMADDVADLIVYATSRKQN  265 (287)
T ss_dssp             HHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTT---------SCCEEHHHHHHHHHHHHTSCTT
T ss_pred             HHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcc---------cCCCCHHHHHHHHHHHhCCCCC
Confidence            777   58999999999997642100000001111111111         1234899999999999987644

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=98.83  E-value=4.3e-08  Score=69.74  Aligned_cols=128  Identities=13%  Similarity=0.071  Sum_probs=83.2

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..++|++||.++..+..                   ..+...|+.+|...+.+.+.+
T Consensus        98 ~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------------~~~~~~Y~~sK~a~~~~~~~l  158 (239)
T 2ekp_A           98 LYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG-------------------PVPIPAYTTAKTALLGLTRAL  158 (239)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-------------------TSCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC-------------------CCCCccHHHHHHHHHHHHHHH
Confidence            5789999999888874    34678999999954432110                   024568999999999998887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~  151 (178)
                      +.+.   |+++.++|||.+.++..... ... ...........     ....+.+++|+|++++.++..+  ...| .+.
T Consensus       159 a~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~-~~~~~~~~~~~-----p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~  231 (239)
T 2ekp_A          159 AKEWARLGIRVNLLCPGYVETEFTLPL-RQN-PELYEPITARI-----PMGRWARPEEIARVAAVLCGDEAEYLTGQAVA  231 (239)
T ss_dssp             HHHHGGGTEEEEEEEECSBCSGGGHHH-HTC-HHHHHHHHTTC-----TTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHhhhcCcEEEEEEeCCccCchhhcc-ccC-HHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHcCchhcCCCCCEEE
Confidence            6654   89999999999977642110 000 11111111111     1234789999999999988653  2345 445


Q ss_pred             EecC
Q 030406          152 CAES  155 (178)
Q Consensus       152 ~~~~  155 (178)
                      +.+.
T Consensus       232 vdgG  235 (239)
T 2ekp_A          232 VDGG  235 (239)
T ss_dssp             ESTT
T ss_pred             ECCC
Confidence            6543

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=98.83  E-value=3.5e-08  Score=70.97  Aligned_cols=124  Identities=19%  Similarity=0.155  Sum_probs=82.4

Q ss_pred             chhHHHHHHHHHHHHHhC------------CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA------------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAV   69 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~------------~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~   69 (178)
                      +++|+.++.++++++...            +-.++|++||..+..+                     ..+...|+.+|..
T Consensus       111 ~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa  169 (257)
T 3tl3_A          111 VDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG---------------------QIGQAAYSASKGG  169 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC---------------------HHHHHHHHHHHHH
T ss_pred             HHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC---------------------CCCCccHHHHHHH
Confidence            578999999999988752            2348999999644321                     1245689999999


Q ss_pred             HHHHHHHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC
Q 030406           70 AEKAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA  146 (178)
Q Consensus        70 ~E~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  146 (178)
                      .+.+.+.++.+   .|+.+..++||.+..+-..... .   ..........+    ....+.+++|+|++++.++..+..
T Consensus       170 ~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~---~~~~~~~~~~~----~~~r~~~p~dva~~v~~l~s~~~i  241 (257)
T 3tl3_A          170 VVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLP-E---EARASLGKQVP----HPSRLGNPDEYGALAVHIIENPML  241 (257)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---C-H---HHHHHHHHTSS----SSCSCBCHHHHHHHHHHHHHCTTC
T ss_pred             HHHHHHHHHHHhcccCcEEEEEEecCccChhhhhcc-H---HHHHHHHhcCC----CCCCccCHHHHHHHHHHHhcCCCC
Confidence            99998877655   4799999999999765432211 1   11111111111    114578899999999999987666


Q ss_pred             CC-cEEEec
Q 030406          147 SG-RYLCAE  154 (178)
Q Consensus       147 ~~-~~~~~~  154 (178)
                      .| .+++.+
T Consensus       242 tG~~i~vdG  250 (257)
T 3tl3_A          242 NGEVIRLDG  250 (257)
T ss_dssp             CSCEEEEST
T ss_pred             CCCEEEECC
Confidence            66 445644

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=98.82  E-value=3.4e-08  Score=73.35  Aligned_cols=145  Identities=13%  Similarity=0.025  Sum_probs=81.6

Q ss_pred             chhHHHHHHHHHHHHHhC----------CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE   71 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----------~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E   71 (178)
                      +++|+.|+.++++++...          +..+||++||.+++.+.                     .....|+.||...+
T Consensus       115 ~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~---------------------~~~~~Y~aSKaal~  173 (319)
T 3ioy_A          115 LGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA---------------------GSPGIYNTTKFAVR  173 (319)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC---------------------SSSHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC---------------------CCCHHHHHHHHHHH
Confidence            678999999999888643          24589999996554321                     23467999999655


Q ss_pred             HHHHHHHH---hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCC----ccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           72 KAAWEEAV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGS----AKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        72 ~~~~~~~~---~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      .+.+.++.   ..|+.+.+++||.|.++-..... .....+.......    ...........++++|+|+.++.+++.+
T Consensus       174 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~  252 (319)
T 3ioy_A          174 GLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDD-IRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIEAMKAN  252 (319)
T ss_dssp             HHHHHHHHHHGGGTCEEEEECCCCBC------------------------------CCGGGSSBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhhhcCCEEEEEEcCeEccCcccccc-cCchhhcccccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHcC
Confidence            55554432   35899999999999765422210 0000000000000    0001111112389999999999999875


Q ss_pred             CCCCcEEEecCc--cCHHHHHHHHHHhCC
Q 030406          145 SASGRYLCAESV--LHRGEVVEILAKFFP  171 (178)
Q Consensus       145 ~~~~~~~~~~~~--~s~~e~~~~i~~~~~  171 (178)
                      .   .+++.+..  -.+++....+...+|
T Consensus       253 ~---~~i~~~~~~~~~~~~~~~~~~~~~~  278 (319)
T 3ioy_A          253 R---LHIFSHPDHKEELREVFDEIIAEYQ  278 (319)
T ss_dssp             C---SEECCCSTTHHHHHHHHHHHHHTCC
T ss_pred             C---CEEEcCHHHHHHHHHHHHHHHHhhh
Confidence            2   34443322  234555566666666

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=98.82  E-value=1.6e-08  Score=72.39  Aligned_cols=123  Identities=17%  Similarity=0.100  Sum_probs=80.5

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..++|++||..+.++.                     .+...|+.+|...+.+.+.+
T Consensus       109 ~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  167 (247)
T 1uzm_A          109 INANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI---------------------GNQANYAASKAGVIGMARSI  167 (247)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC--------------------------CCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC---------------------CCChhHHHHHHHHHHHHHHH
Confidence            57899999999988753    567899999996554321                     23467999999999998877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~  151 (178)
                      +.+   .|+++.+++||.+.++..... .   ...........     ....+++++|+|++++.++..+  ...| .++
T Consensus       168 a~e~~~~gi~v~~v~PG~v~t~~~~~~-~---~~~~~~~~~~~-----p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~  238 (247)
T 1uzm_A          168 ARELSKANVTANVVAPGYIDTDMTRAL-D---ERIQQGALQFI-----PAKRVGTPAEVAGVVSFLASEDASYISGAVIP  238 (247)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCHHHHHS-C---HHHHHHHGGGC-----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhhhcCcEEEEEEeCCCcccchhhc-C---HHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHcCccccCCcCCEEE
Confidence            655   489999999999965421100 0   01111111111     1234789999999999988653  2345 455


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       239 vdg  241 (247)
T 1uzm_A          239 VDG  241 (247)
T ss_dssp             EST
T ss_pred             ECC
Confidence            644

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=98.82  E-value=6.1e-08  Score=70.71  Aligned_cols=128  Identities=13%  Similarity=0.053  Sum_probs=84.8

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++..    .+..++|++||..+...                    +..+...|+.+|...+.+.+.+
T Consensus       114 ~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--------------------~~~~~~~Y~asKaa~~~l~~~l  173 (280)
T 3tox_A          114 LDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA--------------------GFAGVAPYAASKAGLIGLVQAL  173 (280)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB--------------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC--------------------CCCCchhHHHHHHHHHHHHHHH
Confidence            57899999999988753    45569999999533211                    0124577999999999999887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+.   |+++..++||.+.++.....................     ....+..++|+|++++.++..+.  ..| .++
T Consensus       174 a~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-----p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~  248 (280)
T 3tox_A          174 AVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLH-----ALKRIARPEEIAEAALYLASDGASFVTGAALL  248 (280)
T ss_dssp             HHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTS-----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccC-----ccCCCcCHHHHHHHHHHHhCccccCCcCcEEE
Confidence            7664   899999999999876532211000111112222221     23457889999999999987542  345 556


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       249 vdG  251 (280)
T 3tox_A          249 ADG  251 (280)
T ss_dssp             EST
T ss_pred             ECC
Confidence            644

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=98.81  E-value=2.6e-08  Score=71.19  Aligned_cols=127  Identities=17%  Similarity=0.143  Sum_probs=82.7

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..++|++||.++..+.+                    .+...|+.+|...+.+.+.+
T Consensus       102 ~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~l  161 (246)
T 2ag5_A          102 MNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV--------------------VNRCVYSTTKAAVIGLTKSV  161 (246)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC--------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC--------------------CCCccHHHHHHHHHHHHHHH
Confidence            57899999999988753    4567999999954332110                    14467999999999999887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCCh---hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVN---ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-  148 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-  148 (178)
                      +.+   .|+++.++||+.++++.......   .............      ....+++++|+|++++.++..+.  ..| 
T Consensus       162 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dvA~~v~~l~s~~~~~~tG~  235 (246)
T 2ag5_A          162 AADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQ------KTGRFATAEEIAMLCVYLASDESAYVTGN  235 (246)
T ss_dssp             HHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTC------TTSSCEEHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcC------CCCCCCCHHHHHHHHHHHhCccccCCCCC
Confidence            765   38999999999998864211000   0000111111111      12247899999999999886532  345 


Q ss_pred             cEEEec
Q 030406          149 RYLCAE  154 (178)
Q Consensus       149 ~~~~~~  154 (178)
                      .+.+.+
T Consensus       236 ~i~vdg  241 (246)
T 2ag5_A          236 PVIIDG  241 (246)
T ss_dssp             EEEECT
T ss_pred             EEEECC
Confidence            445644

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=98.81  E-value=1.4e-08  Score=74.70  Aligned_cols=126  Identities=10%  Similarity=-0.050  Sum_probs=82.2

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..++|++||. +.++.                     .....|+.+|...+.+.+.+
T Consensus       128 ~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~-~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  185 (303)
T 1yxm_A          128 LETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP-TKAGF---------------------PLAVHSGAARAGVYNLTKSL  185 (303)
T ss_dssp             HHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCC-CTTCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEee-cccCC---------------------CcchhhHHHHHHHHHHHHHH
Confidence            57899999999999765    235789999995 33210                     13457999999999998887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+.   |+++.++|||.++|+...................     ......+++++|+|++++.++....  ..| .++
T Consensus       186 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-----~~p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~  260 (303)
T 1yxm_A          186 ALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQ-----KIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVD  260 (303)
T ss_dssp             HHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGG-----GSTTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHh-----cCcccCCCCHHHHHHHHHHHhCcccccCCCcEEE
Confidence            7664   8999999999999984211111000000000000     0112347899999999999986532  344 556


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       261 v~g  263 (303)
T 1yxm_A          261 VDG  263 (303)
T ss_dssp             EST
T ss_pred             ECC
Confidence            643

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=98.81  E-value=5.6e-08  Score=69.90  Aligned_cols=133  Identities=15%  Similarity=0.058  Sum_probs=87.1

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...  +-.++|++||.++..+                     ..+...|+.+|...+.+.+.++.
T Consensus       110 ~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~~~~~la~  168 (255)
T 4eso_A          110 FAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGG---------------------HPGMSVYSASKAALVSFASVLAA  168 (255)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSB---------------------CTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCC---------------------CCCchHHHHHHHHHHHHHHHHHH
Confidence            678999999999999863  2358999999644321                     12457899999999999988776


Q ss_pred             hc---CCcEEEecCCceeCCCCCCC--ChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC-CCCCC-cEEE
Q 030406           80 AR---GVDLVVVNPVLVLGPLLQST--VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET-PSASG-RYLC  152 (178)
Q Consensus        80 ~~---~~~~~i~R~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~-~~~~~-~~~~  152 (178)
                      +.   |+++..++||.+..+.....  .......+.......     .....+.+++|+|++++.++.. ....| .+++
T Consensus       169 e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-----~p~~r~~~pedvA~~v~~L~s~~~~itG~~i~v  243 (255)
T 4eso_A          169 ELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNI-----TPMKRNGTADEVARAVLFLAFEATFTTGAKLAV  243 (255)
T ss_dssp             HTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHH-----STTSSCBCHHHHHHHHHHHHHTCTTCCSCEEEE
T ss_pred             HHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhcc-----CCCCCCcCHHHHHHHHHHHcCcCcCccCCEEEE
Confidence            64   89999999999987643221  111111111211111     1223467899999999888764 22345 5566


Q ss_pred             e-cCccCHH
Q 030406          153 A-ESVLHRG  160 (178)
Q Consensus       153 ~-~~~~s~~  160 (178)
                      . |...++.
T Consensus       244 dGG~~~~l~  252 (255)
T 4eso_A          244 DGGLGQKLS  252 (255)
T ss_dssp             STTTTTTBC
T ss_pred             CCCccccCc
Confidence            4 4444443

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=98.81  E-value=5.8e-08  Score=70.38  Aligned_cols=120  Identities=17%  Similarity=0.109  Sum_probs=83.1

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++.    +.+..+||++||.++.++.                     .....|+.+|...+.+.+.+
T Consensus       134 ~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~l~~~l  192 (269)
T 4dmm_A          134 LDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGN---------------------PGQANYSAAKAGVIGLTKTV  192 (269)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC---------------------CCchhHHHHHHHHHHHHHHH
Confidence            5789999999998874    3456799999996555431                     24467999999999988877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC---CCC-cE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS---ASG-RY  150 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~-~~  150 (178)
                      +.+   .|+++..++||.+..+....    ..   .......     .....+.+++|+|++++.++..+.   ..| .+
T Consensus       193 a~e~~~~gi~vn~v~PG~v~T~~~~~----~~---~~~~~~~-----~p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i  260 (269)
T 4dmm_A          193 AKELASRGITVNAVAPGFIATDMTSE----LA---AEKLLEV-----IPLGRYGEAAEVAGVVRFLAADPAAAYITGQVI  260 (269)
T ss_dssp             HHHHGGGTCEEEEEEECCBTTSCSCH----HH---HHHHGGG-----CTTSSCBCHHHHHHHHHHHHHCGGGGGCCSCEE
T ss_pred             HHHHhhhCcEEEEEEECCCcCccccc----cc---HHHHHhc-----CCCCCCCCHHHHHHHHHHHhCCcccCCCcCCEE
Confidence            664   58999999999997654221    11   1111111     123457789999999999987632   235 55


Q ss_pred             EEec
Q 030406          151 LCAE  154 (178)
Q Consensus       151 ~~~~  154 (178)
                      ++.+
T Consensus       261 ~vdG  264 (269)
T 4dmm_A          261 NIDG  264 (269)
T ss_dssp             EEST
T ss_pred             EECC
Confidence            6644

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=98.81  E-value=3.8e-08  Score=70.89  Aligned_cols=131  Identities=12%  Similarity=0.077  Sum_probs=80.1

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..+||++||.++..+.                     .+...|+.+|...+.+.+.+
T Consensus       111 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~l  169 (260)
T 1x1t_A          111 LALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS---------------------ANKSAYVAAKHGVVGFTKVT  169 (260)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC---------------------CCCchHHHHHHHHHHHHHHH
Confidence            57899999998888853    456799999996443321                     24468999999999999887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHH----HHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIH----ILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG  148 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~  148 (178)
                      +.+.   |+++.+++||.+.++............    ........ .........+.+++|+|++++.++..+  ...|
T Consensus       170 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG  248 (260)
T 1x1t_A          170 ALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAAREL-LSEKQPSLQFVTPEQLGGTAVFLASDAAAQITG  248 (260)
T ss_dssp             HHHHTTTTEEEEEEEECCBCC------------------------C-HHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHH-hhccCCCCCCcCHHHHHHHHHHHhChhhcCCCC
Confidence            6653   799999999999876422110000000    00000000 000011245789999999999988653  2344


Q ss_pred             -cEEEec
Q 030406          149 -RYLCAE  154 (178)
Q Consensus       149 -~~~~~~  154 (178)
                       .+++.+
T Consensus       249 ~~~~vdg  255 (260)
T 1x1t_A          249 TTVSVDG  255 (260)
T ss_dssp             CEEEEST
T ss_pred             CEEEECC
Confidence             556654

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=98.81  E-value=6.7e-08  Score=69.99  Aligned_cols=124  Identities=15%  Similarity=0.093  Sum_probs=82.3

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..+||++||..+..+.                     .+...|+.+|...+.+.+.+
T Consensus       131 ~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~~~~~l  189 (269)
T 3gk3_A          131 MRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGA---------------------FGQANYASAKAGIHGFTKTL  189 (269)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCC---------------------CCcchHHHHHHHHHHHHHHH
Confidence            57899999999888753    455799999996554321                     24578999999999998877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+   .|+++..++||.+..+.....    ..   .... ...........+..++|+|++++.++..+.  ..| .++
T Consensus       190 a~e~~~~gi~v~~v~PG~v~T~~~~~~----~~---~~~~-~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~  261 (269)
T 3gk3_A          190 ALETAKRGITVNTVSPGYLATAMVEAV----PQ---DVLE-AKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLA  261 (269)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCTTTTC---------------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEE
T ss_pred             HHHhhhcCCEEEEEecCcccchhhhhh----ch---hHHH-HHhhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEE
Confidence            665   379999999999976542221    00   0000 000011223456789999999999987653  345 556


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +++
T Consensus       262 vdg  264 (269)
T 3gk3_A          262 ING  264 (269)
T ss_dssp             EST
T ss_pred             ECC
Confidence            644

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=98.80  E-value=6e-08  Score=70.05  Aligned_cols=124  Identities=15%  Similarity=0.124  Sum_probs=80.6

Q ss_pred             chhHHHHHHHHHHHHHhC-----CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA-----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++...     +..++|++||..+..+                     ..+...|+.+|...+.+.+.
T Consensus       129 ~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------------~~~~~~Y~~sKaa~~~~~~~  187 (266)
T 3o38_A          129 LNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRA---------------------QHSQSHYAAAKAGVMALTRC  187 (266)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCC---------------------CTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCC---------------------CCCCchHHHHHHHHHHHHHH
Confidence            578999999999888753     4568999999544321                     12457899999999999988


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cE
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY  150 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~  150 (178)
                      ++.+   .|+.+..++||.+..+.......   .........     ......+.+++|+|++++.++..+  ...| .+
T Consensus       188 la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~-----~~~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i  259 (266)
T 3o38_A          188 SAIEAVEFGVRINAVSPSIARHKFLEKTSS---SELLDRLAS-----DEAFGRAAEPWEVAATIAFLASDYSSYMTGEVV  259 (266)
T ss_dssp             HHHHHGGGTEEEEEEEECCCCC-------------------------CCTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHcCcEEEEEeCCcccchhhhccCc---HHHHHHHHh-----cCCcCCCCCHHHHHHHHHHHcCccccCccCCEE
Confidence            7766   58999999999997654221100   001111111     123456789999999999988753  2345 44


Q ss_pred             EEec
Q 030406          151 LCAE  154 (178)
Q Consensus       151 ~~~~  154 (178)
                      ++++
T Consensus       260 ~vdg  263 (266)
T 3o38_A          260 SVSS  263 (266)
T ss_dssp             EESS
T ss_pred             EEcC
Confidence            5644

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=98.80  E-value=2.2e-08  Score=72.65  Aligned_cols=123  Identities=15%  Similarity=0.082  Sum_probs=82.8

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++..    .+..+||++||.++..+.                     .+...|+.+|...+.+.+.+
T Consensus       133 ~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~l  191 (270)
T 3ftp_A          133 IDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGN---------------------PGQVNYAAAKAGVAGMTRAL  191 (270)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC---------------------CCchhHHHHHHHHHHHHHHH
Confidence            57899999999998853    345689999996554321                     24467999999999998877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~  151 (178)
                      +.+   .|+++.+++||.+..+-....    ...........     .....+.+++|+|++++.++..+  ...| .++
T Consensus       192 a~e~~~~gI~vn~v~PG~v~T~~~~~~----~~~~~~~~~~~-----~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~  262 (270)
T 3ftp_A          192 AREIGSRGITVNCVAPGFIDTDMTKGL----PQEQQTALKTQ-----IPLGRLGSPEDIAHAVAFLASPQAGYITGTTLH  262 (270)
T ss_dssp             HHHHGGGTEEEEEEEECSBCSHHHHHS----CHHHHHHHHTT-----CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHhhhCeEEEEEEeCCCcCcchhhc----CHHHHHHHHhc-----CCCCCCCCHHHHHHHHHHHhCCCcCCccCcEEE
Confidence            665   489999999999976421110    00111111111     12345788999999999988543  2345 556


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +++
T Consensus       263 vdG  265 (270)
T 3ftp_A          263 VNG  265 (270)
T ss_dssp             EST
T ss_pred             ECC
Confidence            654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=98.80  E-value=3e-08  Score=71.00  Aligned_cols=125  Identities=14%  Similarity=0.058  Sum_probs=77.6

Q ss_pred             chhHHHHHHHHHHH----HHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVA----AAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.+++++    +++.+..+||++||..+..+                     ..+...|+.+|...+.+.+.+
T Consensus       110 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asK~a~~~~~~~l  168 (249)
T 2ew8_A          110 FEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK---------------------IEAYTHYISTKAANIGFTRAL  168 (249)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC---------------------CSSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC---------------------CCCchhHHHHHHHHHHHHHHH
Confidence            57899998888877    44556789999999544321                     124567999999999999887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~  151 (178)
                      +.+   .|+++.+++||.+.++.........   ...... ...   .....+.+++|+|++++.++..+  ...| .+.
T Consensus       169 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~-~~~---~~~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~  241 (249)
T 2ew8_A          169 ASDLGKDGITVNAIAPSLVRTATTEASALSA---MFDVLP-NML---QAIPRLQVPLDLTGAAAFLASDDASFITGQTLA  241 (249)
T ss_dssp             HHHHGGGTEEEEEEEECCC----------------------CTT---SSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHhcCcEEEEEecCcCcCccchhccccc---hhhHHH-Hhh---CccCCCCCHHHHHHHHHHHcCcccCCCCCcEEE
Confidence            665   4899999999999876422000000   000000 000   11234789999999999998653  2345 445


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       242 vdG  244 (249)
T 2ew8_A          242 VDG  244 (249)
T ss_dssp             ESS
T ss_pred             ECC
Confidence            644

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=98.80  E-value=6.2e-08  Score=70.49  Aligned_cols=116  Identities=15%  Similarity=0.087  Sum_probs=75.9

Q ss_pred             chhHHHH----HHHHHHHHHhCCC--CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHH
Q 030406            2 VEPAVIG----TKNVIVAAAEAKV--RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW   75 (178)
Q Consensus         2 ~~~nv~~----t~~ll~~~~~~~~--~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~   75 (178)
                      +++|+.+    +++++.++++.+.  .+||++||. +.+...                  +..+...|+.+|...+.+.+
T Consensus       139 ~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~-~~~~~~------------------~~~~~~~Y~~sK~a~~~~~~  199 (279)
T 1xg5_A          139 FNVNVLALSICTREAYQSMKERNVDDGHIININSM-SGHRVL------------------PLSVTHFYSATKYAVTALTE  199 (279)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCG-GGTSCC------------------SCGGGHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcCh-hhcccC------------------CCCCCchhHHHHHHHHHHHH
Confidence            5789999    7778888887775  799999995 433110                  11345789999999999888


Q ss_pred             HHHHh-----cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC
Q 030406           76 EEAVA-----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        76 ~~~~~-----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                      .++.+     .++++.+++||.+.++............+...         .....+++++|+|++++.++..+.
T Consensus       200 ~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dvA~~i~~l~~~~~  265 (279)
T 1xg5_A          200 GLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAAT---------YEQMKCLKPEDVAEAVIYVLSTPA  265 (279)
T ss_dssp             HHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHH---------HC---CBCHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhh---------cccccCCCHHHHHHHHHHHhcCCc
Confidence            76553     47999999999997653100000000000000         112347899999999999998653

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=98.79  E-value=2.9e-08  Score=72.27  Aligned_cols=124  Identities=17%  Similarity=0.109  Sum_probs=83.0

Q ss_pred             chhHHHHHHHHHHHHHh----------CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----------AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE   71 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----------~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E   71 (178)
                      +++|+.++.++++++..          .+-.+||++||.++..+                     ......|+.+|.+.+
T Consensus       137 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~  195 (281)
T 3ppi_A          137 IDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEG---------------------QIGQTAYAAAKAGVI  195 (281)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCC---------------------CCCCcccHHHHHHHH
Confidence            57899999999988863          23458999999644321                     124578999999999


Q ss_pred             HHHHHHHHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC
Q 030406           72 KAAWEEAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG  148 (178)
Q Consensus        72 ~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~  148 (178)
                      .+.+.++.+.   |+.+..++||.+..+-.....   ...........+     ....+++++|+|++++.++..+...|
T Consensus       196 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~~~~~-----~~~~~~~pedvA~~v~~l~s~~~~tG  267 (281)
T 3ppi_A          196 GLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVG---EEALAKFAANIP-----FPKRLGTPDEFADAAAFLLTNGYING  267 (281)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTC---HHHHHHHHHTCC-----SSSSCBCHHHHHHHHHHHHHCSSCCS
T ss_pred             HHHHHHHHHHhhcCeEEEEEecCcCCchhhhccc---HHHHHHHHhcCC-----CCCCCCCHHHHHHHHHHHHcCCCcCC
Confidence            9888766654   799999999999654211110   111112222211     12457899999999999998766666


Q ss_pred             -cEEEec
Q 030406          149 -RYLCAE  154 (178)
Q Consensus       149 -~~~~~~  154 (178)
                       .+++++
T Consensus       268 ~~i~vdG  274 (281)
T 3ppi_A          268 EVMRLDG  274 (281)
T ss_dssp             CEEEEST
T ss_pred             cEEEECC
Confidence             445643

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=98.79  E-value=1.8e-08  Score=72.35  Aligned_cols=113  Identities=13%  Similarity=0.054  Sum_probs=81.8

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...  .-.+||++||..+.++                     ..+...|+.+|...+.+.+.++.
T Consensus       116 ~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~~sKaa~~~~~~~la~  174 (251)
T 3orf_A          116 IDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNR---------------------TSGMIAYGATKAATHHIIKDLAS  174 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC---------------------CTTBHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccC---------------------CCCCchhHHHHHHHHHHHHHHHH
Confidence            578999999999999864  1248999999644432                     12456799999999999999887


Q ss_pred             h-----cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC---CCCCC-cE
Q 030406           80 A-----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET---PSASG-RY  150 (178)
Q Consensus        80 ~-----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~---~~~~~-~~  150 (178)
                      +     .|+++.+++||.+..+.            .......     .....+++++|+|++++.++..   ....| .+
T Consensus       175 e~~~~~~gi~v~~v~PG~v~t~~------------~~~~~~~-----~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i  237 (251)
T 3orf_A          175 ENGGLPAGSTSLGILPVTLDTPT------------NRKYMSD-----ANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLV  237 (251)
T ss_dssp             TTSSSCTTCEEEEEEESCBCCHH------------HHHHCTT-----SCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEE
T ss_pred             HhcccCCCcEEEEEecCcCcCcc------------hhhhccc-----ccccccCCHHHHHHHHHHHhcCccccCCcceEE
Confidence            7     57999999999886532            1111111     2345678899999999999987   33445 44


Q ss_pred             EE
Q 030406          151 LC  152 (178)
Q Consensus       151 ~~  152 (178)
                      .+
T Consensus       238 ~v  239 (251)
T 3orf_A          238 KF  239 (251)
T ss_dssp             EE
T ss_pred             EE
Confidence            44

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=98.79  E-value=9.1e-08  Score=68.72  Aligned_cols=126  Identities=17%  Similarity=0.100  Sum_probs=80.6

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++    ++.+ .++|++||.++..+                     ..+...|+.+|...+.+.+.+
T Consensus       107 ~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~---------------------~~~~~~Y~asK~a~~~~~~~l  164 (254)
T 3kzv_A          107 YDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMY---------------------FSSWGAYGSSKAALNHFAMTL  164 (254)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCS---------------------SCCSHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccC---------------------CCCcchHHHHHHHHHHHHHHH
Confidence            578999999999988    4445 79999999544321                     124568999999999999988


Q ss_pred             HHhc-CCcEEEecCCceeCCCCCCCChh-----hHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC---CCC
Q 030406           78 AVAR-GVDLVVVNPVLVLGPLLQSTVNA-----SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS---ASG  148 (178)
Q Consensus        78 ~~~~-~~~~~i~R~~~v~G~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~  148 (178)
                      +.+. ++++..++||.+..+-.......     ............     .....+.+++|+|++++.++..+.   ..|
T Consensus       165 a~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~r~~~p~dva~~v~~L~s~~~~~~itG  239 (254)
T 3kzv_A          165 ANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGL-----KENNQLLDSSVPATVYAKLALHGIPDGVNG  239 (254)
T ss_dssp             HHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHH-----HTTC----CHHHHHHHHHHHHHCCCGGGTT
T ss_pred             HhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHH-----HhcCCcCCcccHHHHHHHHHhhcccCCCCc
Confidence            8765 89999999999977643221000     001111111111     123347889999999999887653   345


Q ss_pred             cE-EEec
Q 030406          149 RY-LCAE  154 (178)
Q Consensus       149 ~~-~~~~  154 (178)
                      .+ ++.+
T Consensus       240 ~~i~vdg  246 (254)
T 3kzv_A          240 QYLSYND  246 (254)
T ss_dssp             CEEETTC
T ss_pred             cEEEecC
Confidence            44 4544

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=98.78  E-value=2.5e-08  Score=73.25  Aligned_cols=124  Identities=15%  Similarity=-0.012  Sum_probs=82.7

Q ss_pred             chhHHHHHHHHHHHHHhCCC--CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKV--RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~--~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.|+.++++++...-.  .+||++||..+..+                     ......|+.+|...+.+.+.++.
T Consensus       157 ~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~la~  215 (294)
T 3r3s_A          157 FAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQP---------------------SPHLLDYAATKAAILNYSRGLAK  215 (294)
T ss_dssp             HHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccC---------------------CCCchHHHHHHHHHHHHHHHHHH
Confidence            67899999999999987533  49999999544321                     12446799999999999888776


Q ss_pred             hc---CCcEEEecCCceeCCCCCC-CChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEEE
Q 030406           80 AR---GVDLVVVNPVLVLGPLLQS-TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLC  152 (178)
Q Consensus        80 ~~---~~~~~i~R~~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~  152 (178)
                      +.   |+++..++||.|.++.... .....      .  ............+..++|+|++++.++....  ..| .+++
T Consensus       216 e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~------~--~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~v  287 (294)
T 3r3s_A          216 QVAEKGIRVNIVAPGPIWTALQISGGQTQD------K--IPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGV  287 (294)
T ss_dssp             HHGGGTCEEEEEEECSBCSHHHHTTTSCGG------G--STTTTTTSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHhhcCeEEEEEecCcCccccccccCCCHH------H--HHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEE
Confidence            64   8999999999998753100 00000      0  0000001123457789999999999886542  344 5566


Q ss_pred             ec
Q 030406          153 AE  154 (178)
Q Consensus       153 ~~  154 (178)
                      .+
T Consensus       288 dG  289 (294)
T 3r3s_A          288 CG  289 (294)
T ss_dssp             ST
T ss_pred             CC
Confidence            44

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=98.78  E-value=2.2e-08  Score=72.11  Aligned_cols=131  Identities=18%  Similarity=0.154  Sum_probs=76.0

Q ss_pred             chhHHHHHHHHHHHHHhC----C----CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----K----VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKA   73 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~----~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~   73 (178)
                      +++|+.++.++++++...    +    ..++|++||..+..+                     ......|+.+|...+.+
T Consensus       112 ~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~~  170 (261)
T 3n74_A          112 VGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRP---------------------RPNLAWYNATKGWVVSV  170 (261)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSC---------------------CTTCHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCC---------------------CCCccHHHHHHHHHHHH
Confidence            578999998888887532    1    346999999543321                     12446799999999999


Q ss_pred             HHHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC
Q 030406           74 AWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG  148 (178)
Q Consensus        74 ~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~  148 (178)
                      .+.++.+   .|+++..++|+.+..+...................     ......+++++|+|++++.++....  ..|
T Consensus       171 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~dva~~~~~l~s~~~~~itG  245 (261)
T 3n74_A          171 TKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRD-----SIPMGRLLKPDDLAEAAAFLCSPQASMITG  245 (261)
T ss_dssp             HHHHHHHHGGGTEEEEEEEEC------------------------------CTTSSCCCHHHHHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhh-----cCCcCCCcCHHHHHHHHHHHcCCcccCcCC
Confidence            9887766   58999999999997654222100000001111111     1123468899999999999886432  345


Q ss_pred             -cEEEec-CccC
Q 030406          149 -RYLCAE-SVLH  158 (178)
Q Consensus       149 -~~~~~~-~~~s  158 (178)
                       .+++.+ ..++
T Consensus       246 ~~i~vdgG~~~~  257 (261)
T 3n74_A          246 VALDVDGGRSIG  257 (261)
T ss_dssp             CEEEESTTTTC-
T ss_pred             cEEEecCCcccC
Confidence             556644 3443

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=98.78  E-value=9.6e-09  Score=76.41  Aligned_cols=136  Identities=13%  Similarity=0.097  Sum_probs=90.1

Q ss_pred             chhHHHHHHHHHHHHHhCC----------CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAK----------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE   71 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~----------~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E   71 (178)
                      +++|+.++.++++++...-          -.+||++||.++..+.                     .....|+.+|...+
T Consensus       142 ~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~---------------------~~~~~Y~asKaal~  200 (322)
T 3qlj_A          142 IAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGS---------------------VGQGNYSAAKAGIA  200 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCB---------------------TTCHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCC---------------------CCCccHHHHHHHHH
Confidence            5789999999999875421          1489999996554321                     24467999999999


Q ss_pred             HHHHHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--C
Q 030406           72 KAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--A  146 (178)
Q Consensus        72 ~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~  146 (178)
                      .+.+.++.+   .|+++..++|| +..+-.........            ......+.++.++|+|++++.++....  .
T Consensus       201 ~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~------------~~~~~~~~~~~pedva~~v~~L~s~~~~~i  267 (322)
T 3qlj_A          201 TLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM------------ATQDQDFDAMAPENVSPLVVWLGSAEARDV  267 (322)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--------------------CCTTCGGGTHHHHHHHTSGGGGGC
T ss_pred             HHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh------------hccccccCCCCHHHHHHHHHHHhCccccCC
Confidence            999887766   58999999999 54332111100000            011223456789999999999886542  2


Q ss_pred             CC-cEEEecC------------------ccCHHHHHHHHHHhCC
Q 030406          147 SG-RYLCAES------------------VLHRGEVVEILAKFFP  171 (178)
Q Consensus       147 ~~-~~~~~~~------------------~~s~~e~~~~i~~~~~  171 (178)
                      .| .+++.+.                  .++..|+++.+.+.++
T Consensus       268 tG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~  311 (322)
T 3qlj_A          268 TGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLG  311 (322)
T ss_dssp             CSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHH
T ss_pred             CCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhh
Confidence            34 4555432                  2377999999988764

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=98.78  E-value=6.4e-08  Score=69.97  Aligned_cols=127  Identities=15%  Similarity=0.131  Sum_probs=81.4

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..+||++||.++..+                     ..+...|+.+|...+.+.+.+
T Consensus       102 ~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~l  160 (264)
T 2dtx_A          102 IDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASII---------------------TKNASAYVTSKHAVIGLTKSI  160 (264)
T ss_dssp             HHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSC---------------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccC---------------------CCCchhHHHHHHHHHHHHHHH
Confidence            57899999888888764    45689999999543321                     124568999999999999988


Q ss_pred             HHhcC--CcEEEecCCceeCCCCCCCC------hh-hHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--C
Q 030406           78 AVARG--VDLVVVNPVLVLGPLLQSTV------NA-SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--A  146 (178)
Q Consensus        78 ~~~~~--~~~~i~R~~~v~G~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~  146 (178)
                      +.+.+  +++.+++||.+.++-.....      .. ............     .....+++++|+|++++.++..+.  .
T Consensus       161 a~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~~~~~p~dvA~~v~~l~s~~~~~~  235 (264)
T 2dtx_A          161 ALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHE-----HPMQRIGKPQEVASAVAFLASREASFI  235 (264)
T ss_dssp             HHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHH-----STTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhc-----CCCCCCcCHHHHHHHHHHHhCchhcCC
Confidence            77655  88999999998654211000      00 000001111000     122358899999999999987542  3


Q ss_pred             CC-cEEEec
Q 030406          147 SG-RYLCAE  154 (178)
Q Consensus       147 ~~-~~~~~~  154 (178)
                      .| .+++.+
T Consensus       236 tG~~i~vdG  244 (264)
T 2dtx_A          236 TGTCLYVDG  244 (264)
T ss_dssp             CSCEEEEST
T ss_pred             CCcEEEECC
Confidence            44 555644

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=98.78  E-value=2.4e-08  Score=71.98  Aligned_cols=127  Identities=15%  Similarity=0.039  Sum_probs=79.3

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..+||++||..+..+                     ..+...|+.+|...+.+.+.+
T Consensus       113 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~l  171 (260)
T 2z1n_A          113 YRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRP---------------------WQDLALSNIMRLPVIGVVRTL  171 (260)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---------------------CTTBHHHHHHTHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCC---------------------CCCCchhHHHHHHHHHHHHHH
Confidence            5789999866666654    456789999999543321                     124468999999999998887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCCh------hhHHHH-HHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--C
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVN------ASIIHI-LKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--S  145 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~  145 (178)
                      +.+.   |+++.+++||.+.++.......      ...... .......     .....+.+++|+|++++.++..+  .
T Consensus       172 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~r~~~~~dva~~v~~l~s~~~~~  246 (260)
T 2z1n_A          172 ALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASR-----IPMGRVGKPEELASVVAFLASEKASF  246 (260)
T ss_dssp             HHHHGGGTEEEEEEEECHHHHCCCC-----------------------C-----CTTSSCCCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhc-----CCCCCccCHHHHHHHHHHHhCccccC
Confidence            6654   8999999999998765321000      000000 0000000     11234779999999999998753  2


Q ss_pred             CCC-cEEEec
Q 030406          146 ASG-RYLCAE  154 (178)
Q Consensus       146 ~~~-~~~~~~  154 (178)
                      ..| .+++.+
T Consensus       247 ~tG~~i~vdG  256 (260)
T 2z1n_A          247 ITGAVIPVDG  256 (260)
T ss_dssp             CCSCEEEEST
T ss_pred             CCCCEEEeCC
Confidence            345 445644

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=98.78  E-value=8.6e-08  Score=68.84  Aligned_cols=122  Identities=16%  Similarity=0.059  Sum_probs=79.1

Q ss_pred             chhHHHHHHHH----HHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNV----IVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~l----l~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++    +..+++.+..+||++||.++..+.                     .+...|+.+|...+.+.+.+
T Consensus       107 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~l  165 (254)
T 1hdc_A          107 VEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL---------------------ALTSSYGASKWGVRGLSKLA  165 (254)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC---------------------CCchhHHHHHHHHHHHHHHH
Confidence            57899998754    445555567899999996443221                     24467999999999998887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCcccc-CC-CCcccc-cHHHHHHHHHHhhcCC--CCCC-
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY-AN-SVQAYV-HVRDVALAHILVYETP--SASG-  148 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~i-~v~D~a~~~~~~~~~~--~~~~-  148 (178)
                      +.+   .|+++.++|||.+.++..        ..   ......... .. ....+. +++|+|++++.++..+  ...| 
T Consensus       166 a~e~~~~gi~v~~v~Pg~v~t~~~--------~~---~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~  234 (254)
T 1hdc_A          166 AVELGTDRIRVNSVHPGMTYTPMT--------AE---TGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGA  234 (254)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCHHH--------HH---HTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHhhhcCeEEEEEecccCcCccc--------cc---cchhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCCC
Confidence            665   479999999999977531        00   000000000 11 122367 9999999999988754  2345 


Q ss_pred             cEEEecC
Q 030406          149 RYLCAES  155 (178)
Q Consensus       149 ~~~~~~~  155 (178)
                      .+.+.+.
T Consensus       235 ~~~vdgG  241 (254)
T 1hdc_A          235 ELAVDGG  241 (254)
T ss_dssp             EEEESTT
T ss_pred             EEEECCC
Confidence            4556443

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=98.77  E-value=3.4e-08  Score=72.06  Aligned_cols=140  Identities=16%  Similarity=0.176  Sum_probs=88.2

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...  +..++|++||.++..+.... +   ..|..      +..+...|+.+|...+.+.+.++.
T Consensus       125 ~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-~---~~~~~------~~~~~~~Y~asK~a~~~~~~~la~  194 (287)
T 3pxx_A          125 FDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQP-P---GAGGP------QGPGGAGYSYAKQLVDSYTLQLAA  194 (287)
T ss_dssp             HHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCC-C--------------CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccc-c---ccccc------CCCccchHHHHHHHHHHHHHHHHH
Confidence            678999999999999874  34689999996555442211 1   22221      223456799999999999988777


Q ss_pred             hc---CCcEEEecCCceeCCCCCCCChhhHHHHH---------HHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--C
Q 030406           80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHIL---------KYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--S  145 (178)
Q Consensus        80 ~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~  145 (178)
                      +.   |+++..++||.+..+.....  .....+.         ..... ..........+.+++|+|++++.++...  .
T Consensus       195 e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~  271 (287)
T 3pxx_A          195 QLAPQSIRANVIHPTNVNTDMLNSA--PMYRQFRPDLEAPSRADALLA-FPAMQAMPTPYVEASDISNAVCFLASDESRY  271 (287)
T ss_dssp             HHGGGTCEEEEEEESSBSSTTTSSH--HHHHHHCTTSSSCCHHHHHHH-GGGGCSSSCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHhhcCcEEEEEecCcccccccccc--chhhhhccccccchhHHHHhh-hhhhcccCCCCCCHHHHHhhHheecchhhcC
Confidence            65   89999999999987653221  0000000         00000 0011122267899999999999988643  2


Q ss_pred             CCC-cEEEec
Q 030406          146 ASG-RYLCAE  154 (178)
Q Consensus       146 ~~~-~~~~~~  154 (178)
                      ..| .+++.+
T Consensus       272 itG~~i~vdG  281 (287)
T 3pxx_A          272 VTGLQFKVDA  281 (287)
T ss_dssp             CCSCEEEEST
T ss_pred             CCCceEeECc
Confidence            345 556644

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=98.77  E-value=5.5e-08  Score=68.86  Aligned_cols=103  Identities=18%  Similarity=0.061  Sum_probs=67.1

Q ss_pred             chhHHHHHHHHHHH----HHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVA----AAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.+++++    +++.+.++||++||.++..+                     ..+...|+.+|...+.+.+.+
T Consensus       106 ~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~l  164 (234)
T 2ehd_A          106 LDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNP---------------------FKGGAAYNASKFGLLGLAGAA  164 (234)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSC---------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCC---------------------CCCCchhhHHHHHHHHHHHHH
Confidence            57899998755544    45667789999999533211                     124568999999999988776


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                      +.+   .|+++.++|||.+..+....     .       ..       . ..+++++|+|++++.++..+.
T Consensus       165 a~e~~~~gi~v~~v~Pg~v~t~~~~~-----~-------~~-------~-~~~~~~~dvA~~~~~l~~~~~  215 (234)
T 2ehd_A          165 MLDLREANVRVVNVLPGSVDTGFAGN-----T-------PG-------Q-AWKLKPEDVAQAVLFALEMPG  215 (234)
T ss_dssp             HHHHGGGTEEEEEEECC------------------------------------CCHHHHHHHHHHHHHSCC
T ss_pred             HHHHhhcCcEEEEEEeCCCcCCcccc-----c-------cc-------c-cCCCCHHHHHHHHHHHhCCCc
Confidence            554   58999999999886542110     0       00       0 115799999999999997653

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=98.77  E-value=4.3e-08  Score=71.42  Aligned_cols=128  Identities=14%  Similarity=0.074  Sum_probs=83.7

Q ss_pred             chhHHHHHHHHHHHHHh------CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE------AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW   75 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~------~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~   75 (178)
                      +++|+.|+.++++++..      .+..+||++||.++..+                     ......|+.+|...+.+.+
T Consensus       129 ~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~  187 (279)
T 3sju_A          129 LDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQG---------------------VMYAAPYTASKHGVVGFTK  187 (279)
T ss_dssp             HHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccC---------------------CCCChhHHHHHHHHHHHHH
Confidence            57899999999998754      35579999999644321                     1244679999999999998


Q ss_pred             HHHHh---cCCcEEEecCCceeCCCCCCC-------ChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC
Q 030406           76 EEAVA---RGVDLVVVNPVLVLGPLLQST-------VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        76 ~~~~~---~~~~~~i~R~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                      .++.+   .|+++..++||.+.++.....       ...............     .....+..++|+|++++.++....
T Consensus       188 ~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~r~~~pedvA~~v~~L~s~~a  262 (279)
T 3sju_A          188 SVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAK-----IPLGRYSTPEEVAGLVGYLVTDAA  262 (279)
T ss_dssp             HHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTT-----CTTSSCBCHHHHHHHHHHHTSSGG
T ss_pred             HHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhc-----CCCCCCCCHHHHHHHHHHHhCccc
Confidence            87766   579999999999976421100       000011111111111     123457889999999999887543


Q ss_pred             --CCC-cEEEecC
Q 030406          146 --ASG-RYLCAES  155 (178)
Q Consensus       146 --~~~-~~~~~~~  155 (178)
                        ..| .+++.+.
T Consensus       263 ~~itG~~i~vdGG  275 (279)
T 3sju_A          263 ASITAQALNVCGG  275 (279)
T ss_dssp             GGCCSCEEEESTT
T ss_pred             cCcCCcEEEECCC
Confidence              345 5566543

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=98.76  E-value=6.7e-08  Score=70.85  Aligned_cols=124  Identities=17%  Similarity=0.088  Sum_probs=84.4

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.|+.++++++...  +..+||++||..+..+.                     .....|+.+|...+.+.+.++.
T Consensus       154 ~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~la~  212 (291)
T 3ijr_A          154 FRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN---------------------ETLIDYSATKGAIVAFTRSLSQ  212 (291)
T ss_dssp             HHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCC---------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCC---------------------CCChhHHHHHHHHHHHHHHHHH
Confidence            678999999999999874  34589999996544321                     2346799999999999988776


Q ss_pred             hc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEEEe
Q 030406           80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLCA  153 (178)
Q Consensus        80 ~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~  153 (178)
                      +.   |+++..++||.+.++......  . .........     ......+.+++|+|++++.++....  ..| .+++.
T Consensus       213 e~~~~gi~vn~v~PG~v~T~~~~~~~--~-~~~~~~~~~-----~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vd  284 (291)
T 3ijr_A          213 SLVQKGIRVNGVAPGPIWTPLIPSSF--D-EKKVSQFGS-----NVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVN  284 (291)
T ss_dssp             HHGGGTCEEEEEEECSBCSTHHHHHS--C-HHHHHHTTT-----TSTTSSCBCGGGTHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHhhcCEEEEEEeeCCCcCCcccccC--C-HHHHHHHHc-----cCCCCCCcCHHHHHHHHHHHhCCccCCCcCCEEEEC
Confidence            64   899999999999875311100  0 001111111     1223457789999999999886542  345 55664


Q ss_pred             c
Q 030406          154 E  154 (178)
Q Consensus       154 ~  154 (178)
                      +
T Consensus       285 G  285 (291)
T 3ijr_A          285 G  285 (291)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=98.76  E-value=2.3e-08  Score=72.43  Aligned_cols=124  Identities=11%  Similarity=0.106  Sum_probs=78.8

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++    ++.+..+||++||..+.++.                     .+...|+.+|...+.+.+.+
T Consensus       129 ~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~~~~~l  187 (266)
T 3grp_A          129 LAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN---------------------PGQTNYCAAKAGLIGFSKAL  187 (266)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC----------------------------CHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCC---------------------CCchhHHHHHHHHHHHHHHH
Confidence            578999966666655    44566799999996554321                     24467999999999988877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+   .|+++..++||.+.++......    ..........     .....+.+++|+|++++.++..+.  ..| .++
T Consensus       188 a~e~~~~gI~vn~v~PG~v~t~~~~~~~----~~~~~~~~~~-----~p~~r~~~~edvA~~v~~L~s~~~~~itG~~i~  258 (266)
T 3grp_A          188 AQEIASRNITVNCIAPGFIKSAMTDKLN----EKQKEAIMAM-----IPMKRMGIGEEIAFATVYLASDEAAYLTGQTLH  258 (266)
T ss_dssp             HHHHGGGTEEEEEEEECSBCSHHHHTCC----HHHHHHHHTT-----CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhhhhCcEEEEEeeCcCCCchhhccC----HHHHHHHHhc-----CCCCCCcCHHHHHHHHHHHhCccccCccCCEEE
Confidence            665   4799999999999765321110    1111111111     123456789999999999886542  345 556


Q ss_pred             EecC
Q 030406          152 CAES  155 (178)
Q Consensus       152 ~~~~  155 (178)
                      +++.
T Consensus       259 vdGG  262 (266)
T 3grp_A          259 INGG  262 (266)
T ss_dssp             ESTT
T ss_pred             ECCC
Confidence            6543

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=98.76  E-value=9.3e-08  Score=69.74  Aligned_cols=129  Identities=15%  Similarity=0.041  Sum_probs=83.2

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.|+.++++++...  +..++|++||..+..+.                    ..+...|+.+|...+.+.+.++.
T Consensus       135 ~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~--------------------~~~~~~Y~asK~a~~~~~~~la~  194 (283)
T 1g0o_A          135 FTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA--------------------VPKHAVYSGSKGAIETFARCMAI  194 (283)
T ss_dssp             HHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS--------------------CSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCC--------------------CCCCcchHHHHHHHHHHHHHHHH
Confidence            678999999999999875  56799999995433210                    01356799999999999887765


Q ss_pred             h---cCCcEEEecCCceeCCCCCCC-------Chh-hHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--C
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQST-------VNA-SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--A  146 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~  146 (178)
                      +   .|+++.+++||.+.++.....       ... ............    ......+.+++|+|++++.++..+.  .
T Consensus       195 e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~p~~r~~~p~dvA~~v~~l~s~~~~~i  270 (283)
T 1g0o_A          195 DMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ----WSPLRRVGLPIDIARVVCFLASNDGGWV  270 (283)
T ss_dssp             HHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHH----SCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhc----CCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence            4   489999999999976521100       000 001111111100    0112347889999999999987542  3


Q ss_pred             CC-cEEEec
Q 030406          147 SG-RYLCAE  154 (178)
Q Consensus       147 ~~-~~~~~~  154 (178)
                      .| .+.+.+
T Consensus       271 tG~~i~vdg  279 (283)
T 1g0o_A          271 TGKVIGIDG  279 (283)
T ss_dssp             CSCEEEEST
T ss_pred             CCCEEEeCC
Confidence            45 445644

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=98.76  E-value=5.4e-08  Score=70.86  Aligned_cols=127  Identities=14%  Similarity=0.115  Sum_probs=81.9

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++.    +.+..+||++||..+..+                     ..+...|+.+|...+.+.+.+
T Consensus       129 ~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~l  187 (277)
T 4dqx_A          129 MSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSA---------------------IADRTAYVASKGAISSLTRAM  187 (277)
T ss_dssp             HHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSC---------------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcC---------------------CCCChhHHHHHHHHHHHHHHH
Confidence            5689999998888874    345569999999544321                     124578999999999998887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCC--hhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-c
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTV--NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-R  149 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~  149 (178)
                      +.+.   |+++..++||.+..+......  ..............     .....+.+++|+|++++.++..+.  ..| .
T Consensus       188 a~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-----~~~~r~~~pedvA~~v~~L~s~~~~~itG~~  262 (277)
T 4dqx_A          188 AMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNAR-----AVMDRMGTAEEIAEAMLFLASDRSRFATGSI  262 (277)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTT-----STTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhc-----CcccCCcCHHHHHHHHHHHhCCccCCCcCCE
Confidence            6654   799999999999654200000  00001111111111     123457789999999999886543  345 5


Q ss_pred             EEEec
Q 030406          150 YLCAE  154 (178)
Q Consensus       150 ~~~~~  154 (178)
                      +++.+
T Consensus       263 i~vdG  267 (277)
T 4dqx_A          263 LTVDG  267 (277)
T ss_dssp             EEESS
T ss_pred             EEECC
Confidence            56644

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=98.76  E-value=3.1e-08  Score=71.62  Aligned_cols=134  Identities=15%  Similarity=0.083  Sum_probs=85.6

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...  +..++|++||.++..+                     ......|+.+|...+.+.+.++.
T Consensus       125 ~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~~~~~la~  183 (271)
T 3ek2_A          125 HDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA---------------------IPNYNTMGLAKAALEASVRYLAV  183 (271)
T ss_dssp             HHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB---------------------CTTTTHHHHHHHHHHHHHHHHHH
T ss_pred             HhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC---------------------CCCccchhHHHHHHHHHHHHHHH
Confidence            578999999999999764  2348999999644322                     12456899999999999888766


Q ss_pred             hc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEEE-
Q 030406           80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYLC-  152 (178)
Q Consensus        80 ~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~-  152 (178)
                      +.   |+.+..++||.+..+..... . ............     .....+..++|+|++++.++...  ...| .+++ 
T Consensus       184 e~~~~gi~v~~v~PG~v~T~~~~~~-~-~~~~~~~~~~~~-----~~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vd  256 (271)
T 3ek2_A          184 SLGAKGVRVNAISAGPIKTLAASGI-K-SFGKILDFVESN-----SPLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVD  256 (271)
T ss_dssp             HHHTTTCEEEEEEECCC-----CCC-H-HHHHHHHHHHHH-----STTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEES
T ss_pred             HHHhcCcEEEEEecCcccchhhhcc-c-chHHHHHHHHhc-----CCcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEEC
Confidence            53   89999999999976543221 1 111111111111     12234678999999999998753  3345 5566 


Q ss_pred             ecCccCHHHHH
Q 030406          153 AESVLHRGEVV  163 (178)
Q Consensus       153 ~~~~~s~~e~~  163 (178)
                      +|..+++.+++
T Consensus       257 gG~~~~~~~~~  267 (271)
T 3ek2_A          257 SGFNAVVGGMA  267 (271)
T ss_dssp             TTGGGBCCCC-
T ss_pred             CCeeeehhhhh
Confidence            44555555543

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=98.75  E-value=4.9e-08  Score=69.69  Aligned_cols=123  Identities=15%  Similarity=0.092  Sum_probs=83.0

Q ss_pred             chhHHHHHHHHHHHHHhCCC--CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKV--RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~--~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...-.  .++|++||..+..+                     ......|+.+|...+.+.+.++.
T Consensus        98 ~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------------------~~~~~~Y~asKaa~~~~~~~la~  156 (244)
T 4e4y_A           98 LDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIA---------------------KPNSFAYTLSKGAIAQMTKSLAL  156 (244)
T ss_dssp             HHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCC---------------------CTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccC---------------------CCCCchhHHHHHHHHHHHHHHHH
Confidence            67899999999999986422  48999999544321                     12446799999999999988776


Q ss_pred             ---hcCCcEEEecCCceeCCCCCCCChhhHHH-----------HHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC
Q 030406           80 ---ARGVDLVVVNPVLVLGPLLQSTVNASIIH-----------ILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        80 ---~~~~~~~i~R~~~v~G~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                         ..|+++..++||.+.++....    ....           ........     .....+.+++|+|++++.++..+.
T Consensus       157 e~~~~gi~v~~v~PG~v~T~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-----~p~~r~~~p~dvA~~v~~l~s~~~  227 (244)
T 4e4y_A          157 DLAKYQIRVNTVCPGTVDTDLYRN----LIQKYANNVGISFDEAQKQEEKE-----FPLNRIAQPQEIAELVIFLLSDKS  227 (244)
T ss_dssp             HHGGGTCEEEEEEESCBCCHHHHH----HHHHHHHHHTCCHHHHHHHHHTT-----STTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHcCeEEEEEecCccCchhhHH----HHHhhhhhcCCCHHHHHHHHhhc-----CCCCCCcCHHHHHHHHHHHhcCcc
Confidence               458999999999997653111    1110           11111111     123457889999999999987543


Q ss_pred             --CCC-cEEEec
Q 030406          146 --ASG-RYLCAE  154 (178)
Q Consensus       146 --~~~-~~~~~~  154 (178)
                        ..| .+++.+
T Consensus       228 ~~itG~~i~vdG  239 (244)
T 4e4y_A          228 KFMTGGLIPIDG  239 (244)
T ss_dssp             TTCCSCEEEEST
T ss_pred             ccccCCeEeECC
Confidence              345 556644

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=98.75  E-value=1.1e-07  Score=68.48  Aligned_cols=115  Identities=14%  Similarity=0.059  Sum_probs=80.7

Q ss_pred             chhHHHHHHHHHHHHHhC----------C-----CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----------K-----VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYG   66 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----------~-----~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s   66 (178)
                      +++|+.++.++++++...          +     ..+||++||..+..+..                  +..+...|+.+
T Consensus       131 ~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------------~~~~~~~Y~~s  192 (267)
T 1sny_A          131 LQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGN------------------TDGGMYAYRTS  192 (267)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTC------------------CSCCCHHHHHH
T ss_pred             HhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccCC------------------CCCCchHHHHH
Confidence            578999999999988643          2     47899999954433211                  01245679999


Q ss_pred             HHHHHHHHHHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           67 KAVAEKAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        67 K~~~E~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      |...+.+++.++.+   .|+++.++|||.+..+-...                        ..++..+|+++.++.++..
T Consensus       193 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------------------~~~~~~~~~a~~~~~~~~~  248 (267)
T 1sny_A          193 KSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS------------------------SAPLDVPTSTGQIVQTISK  248 (267)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT------------------------TCSBCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC------------------------CCCCCHHHHHHHHHHHHHh
Confidence            99999999887766   58999999999986542110                        1347789999999999875


Q ss_pred             CC--CCCcEE-EecCccC
Q 030406          144 PS--ASGRYL-CAESVLH  158 (178)
Q Consensus       144 ~~--~~~~~~-~~~~~~s  158 (178)
                      +.  ..|.|+ +.+..+.
T Consensus       249 ~~~~~~G~~~~~~g~~~~  266 (267)
T 1sny_A          249 LGEKQNGGFVNYDGTPLA  266 (267)
T ss_dssp             CCGGGTTCEECTTSCBCC
T ss_pred             cCcCCCCcEEccCCcCcC
Confidence            42  345554 4554443

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.75  E-value=7.2e-08  Score=70.91  Aligned_cols=141  Identities=17%  Similarity=0.136  Sum_probs=88.2

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+ .+||++||..+..+.                    ..+...|+.+|...+.+.+.+
T Consensus       136 ~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~--------------------~~~~~~Y~asKaa~~~l~~~l  194 (297)
T 1xhl_A          136 FKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA--------------------HSGYPYYACAKAALDQYTRCT  194 (297)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC--------------------CTTSHHHHHHHHHHHHHHHHH
T ss_pred             HhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC--------------------CCCcchHHHHHHHHHHHHHHH
Confidence            57899999999888764    35 799999995433211                    013467999999999998877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCC--Chh-h--HHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC---CC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQST--VNA-S--IIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP---SA  146 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~--~~~-~--~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~  146 (178)
                      +.+   .|+++.+++||.+.++.....  ... .  ...........     .....+..++|+|++++.++..+   ..
T Consensus       195 a~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~r~~~pedvA~~v~~l~s~~~~~~i  269 (297)
T 1xhl_A          195 AIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKEC-----IPVGHCGKPEEIANIIVFLADRNLSSYI  269 (297)
T ss_dssp             HHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT-----CTTSSCBCHHHHHHHHHHHHCHHHHTTC
T ss_pred             HHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhc-----CCCCCCcCHHHHHHHHHHHhCCcccCCc
Confidence            643   589999999999987532110  000 0  00111111111     11234789999999999988643   34


Q ss_pred             CC-cEEEe-cCccCHHHHHHHHHH
Q 030406          147 SG-RYLCA-ESVLHRGEVVEILAK  168 (178)
Q Consensus       147 ~~-~~~~~-~~~~s~~e~~~~i~~  168 (178)
                      .| .+++. +..+.+.+.+..+.+
T Consensus       270 tG~~i~vdGG~~~~~~~~~~~~~~  293 (297)
T 1xhl_A          270 IGQSIVADGGSTLVMGMQTHDLMS  293 (297)
T ss_dssp             CSCEEEESTTGGGCCGGGGSCHHH
T ss_pred             cCcEEEECCCccccccccccchhh
Confidence            45 55664 445555554444433

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=98.75  E-value=1.6e-07  Score=68.40  Aligned_cols=129  Identities=16%  Similarity=0.076  Sum_probs=81.1

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..+||++||..+..+                     ..+...|+.+|...+.+.+.+
T Consensus       131 ~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~l  189 (277)
T 3gvc_A          131 IAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVA---------------------VGGTGAYGMSKAGIIQLSRIT  189 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC---------------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC---------------------CCCchhHHHHHHHHHHHHHHH
Confidence            57899999998888754    45678999999644321                     124578999999999998877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCcc-ccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK-TYANSVQAYVHVRDVALAHILVYETP--SASG-RY  150 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~  150 (178)
                      +.+   .|+++.+++||.+.++...........   ........ ........+.+++|+|++++.++...  ...| .+
T Consensus       190 a~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~~i  266 (277)
T 3gvc_A          190 AAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDG---ALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQ  266 (277)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCHHHHHHHTCC---------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHhcccCeEEEEEeeCCccCchHHHhhhcchh---hHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCccCCccCcEE
Confidence            655   589999999999977531100000000   00000000 00001134678999999999998653  2345 55


Q ss_pred             EEec
Q 030406          151 LCAE  154 (178)
Q Consensus       151 ~~~~  154 (178)
                      ++.+
T Consensus       267 ~vdG  270 (277)
T 3gvc_A          267 IADG  270 (277)
T ss_dssp             EEST
T ss_pred             EECC
Confidence            6644

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=98.74  E-value=1.2e-07  Score=68.46  Aligned_cols=127  Identities=13%  Similarity=0.107  Sum_probs=79.9

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++    ++.+..+||++||..+..+                     ..+...|+.+|...+.+.+.+
T Consensus       121 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asK~a~~~~~~~l  179 (267)
T 1iy8_A          121 VSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG---------------------IGNQSGYAAAKHGVVGLTRNS  179 (267)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB---------------------CSSBHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccC---------------------CCCCccHHHHHHHHHHHHHHH
Confidence            578998887665554    4456789999999644321                     124568999999999998877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCC----ChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQST----VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG  148 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~  148 (178)
                      +.+   .|+++.+++||.+.++.....    ................     ....+.+++|+|++++.++..+  ...|
T Consensus       180 a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-----p~~r~~~~~dvA~~v~~l~s~~~~~~tG  254 (267)
T 1iy8_A          180 AVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVN-----PSKRYGEAPEIAAVVAFLLSDDASYVNA  254 (267)
T ss_dssp             HHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTC-----TTCSCBCHHHHHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccC-----CCCCCcCHHHHHHHHHHHcCccccCCCC
Confidence            654   489999999999976531100    0000000000111111     1234789999999999988654  2345


Q ss_pred             -cEEEec
Q 030406          149 -RYLCAE  154 (178)
Q Consensus       149 -~~~~~~  154 (178)
                       .+.+.+
T Consensus       255 ~~i~vdG  261 (267)
T 1iy8_A          255 TVVPIDG  261 (267)
T ss_dssp             CEEEEST
T ss_pred             CEEEECC
Confidence             445644

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=98.73  E-value=1e-07  Score=69.03  Aligned_cols=128  Identities=10%  Similarity=0.069  Sum_probs=83.6

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..+||++||..+..+                     ......|+.+|...+.+.+.+
T Consensus       109 ~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~l  167 (269)
T 3vtz_A          109 IDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAA---------------------TKNAAAYVTSKHALLGLTRSV  167 (269)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB---------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC---------------------CCCChhHHHHHHHHHHHHHHH
Confidence            57899999999988754    45679999999544321                     124568999999999999988


Q ss_pred             HHhc--CCcEEEecCCceeCCCCCCC-------ChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--C
Q 030406           78 AVAR--GVDLVVVNPVLVLGPLLQST-------VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--A  146 (178)
Q Consensus        78 ~~~~--~~~~~i~R~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~  146 (178)
                      +.+.  ++.+..++||.+.++.....       ..............     ......+.+++|+|++++.++....  .
T Consensus       168 a~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~p~~r~~~pedvA~~v~~L~s~~~~~i  242 (269)
T 3vtz_A          168 AIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGR-----QHPMGRIGRPEEVAEVVAFLASDRSSFI  242 (269)
T ss_dssp             HHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHH-----HSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHh-----cCCCCCCcCHHHHHHHHHHHhCCccCCC
Confidence            7776  78899999999976531100       00000111111100     1123457889999999999887542  3


Q ss_pred             CC-cEEEecC
Q 030406          147 SG-RYLCAES  155 (178)
Q Consensus       147 ~~-~~~~~~~  155 (178)
                      .| .+++.+.
T Consensus       243 tG~~i~vdGG  252 (269)
T 3vtz_A          243 TGACLTVDGG  252 (269)
T ss_dssp             CSCEEEESTT
T ss_pred             cCcEEEECCC
Confidence            44 5566543

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.73  E-value=3.4e-08  Score=71.34  Aligned_cols=127  Identities=18%  Similarity=0.160  Sum_probs=83.5

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+ .++|++||..+..+                     ......|+.+|...+.+.+.+
T Consensus       117 ~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~~~~~l  174 (264)
T 3ucx_A          117 IELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHS---------------------QAKYGAYKMAKSALLAMSQTL  174 (264)
T ss_dssp             HHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCC---------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccC---------------------CCccHHHHHHHHHHHHHHHHH
Confidence            57899999999988753    23 69999999644321                     124467999999999998887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChh-------hHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--C
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNA-------SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--S  145 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~  145 (178)
                      +.+   .|+++..++||.+.++........       ....+.......     .....+.+++|+|++++.++...  .
T Consensus       175 a~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~r~~~p~dvA~~v~~L~s~~~~~  249 (264)
T 3ucx_A          175 ATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAG-----SDLKRLPTEDEVASAILFMASDLASG  249 (264)
T ss_dssp             HHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTT-----SSSSSCCBHHHHHHHHHHHHSGGGTT
T ss_pred             HHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhcc-----CCcccCCCHHHHHHHHHHHcCccccC
Confidence            766   689999999999987532110000       001111111111     23445789999999999988653  2


Q ss_pred             CCC-cEEEecC
Q 030406          146 ASG-RYLCAES  155 (178)
Q Consensus       146 ~~~-~~~~~~~  155 (178)
                      ..| .+++.+.
T Consensus       250 itG~~i~vdGG  260 (264)
T 3ucx_A          250 ITGQALDVNCG  260 (264)
T ss_dssp             CCSCEEEESTT
T ss_pred             CCCCEEEECCC
Confidence            345 5566543

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=98.73  E-value=1.5e-08  Score=73.29  Aligned_cols=134  Identities=13%  Similarity=0.092  Sum_probs=80.4

Q ss_pred             chhHHHHHH----HHHHHHHhCC---CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHH
Q 030406            2 VEPAVIGTK----NVIVAAAEAK---VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAA   74 (178)
Q Consensus         2 ~~~nv~~t~----~ll~~~~~~~---~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~   74 (178)
                      +++|+.++.    .++..+++.+   ..+||++||.++..+                     ..+...|+.+|...+.+.
T Consensus       106 ~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~  164 (267)
T 2gdz_A          106 LQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP---------------------VAQQPVYCASKHGIVGFT  164 (267)
T ss_dssp             HHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCC---------------------CCCCchHHHHHHHHHHHH
Confidence            467887654    4555555432   579999999543321                     023457999999999998


Q ss_pred             HHH-----HHhcCCcEEEecCCceeCCCCCCCChhh-HHH---HHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC
Q 030406           75 WEE-----AVARGVDLVVVNPVLVLGPLLQSTVNAS-IIH---ILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        75 ~~~-----~~~~~~~~~i~R~~~v~G~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                      +.+     ....|+++.+++||.+.++......... ...   +......     +.....+++++|+|++++.++..+.
T Consensus       165 ~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~dvA~~v~~l~s~~~  239 (267)
T 2gdz_A          165 RSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKD-----MIKYYGILDPPLIANGLITLIEDDA  239 (267)
T ss_dssp             HHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHH-----HHHHHCCBCHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHH-----HhccccCCCHHHHHHHHHHHhcCcC
Confidence            764     2346899999999999765311100000 000   0000000     0012347899999999999998765


Q ss_pred             CCC-cEEEe-cCccCHHH
Q 030406          146 ASG-RYLCA-ESVLHRGE  161 (178)
Q Consensus       146 ~~~-~~~~~-~~~~s~~e  161 (178)
                      ..| .++++ ++.+++.|
T Consensus       240 ~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          240 LNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             CSSCEEEEETTTEEEECC
T ss_pred             CCCcEEEecCCCcccccC
Confidence            555 56664 45555544

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=98.73  E-value=4.8e-08  Score=71.10  Aligned_cols=126  Identities=13%  Similarity=0.045  Sum_probs=82.8

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..+||++||..+..+.                     .....|+.+|...+.+.+.+
T Consensus       133 ~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~l  191 (277)
T 4fc7_A          133 MDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQ---------------------ALQVHAGSAKAAVDAMTRHL  191 (277)
T ss_dssp             HHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC---------------------CCcHHHHHHHHHHHHHHHHH
Confidence            57899999999998853    345689999996554321                     24467999999999998887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~  151 (178)
                      +.+.   |+++..++||.+.++....................      ...-+..++|+|++++.++...  ...| .++
T Consensus       192 a~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~------p~~r~~~p~dvA~~v~fL~s~~~~~itG~~i~  265 (277)
T 4fc7_A          192 AVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTAS------PLQRLGNKTEIAHSVLYLASPLASYVTGAVLV  265 (277)
T ss_dssp             HHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTS------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccC------CCCCCcCHHHHHHHHHHHcCCccCCcCCCEEE
Confidence            6654   79999999999987531100000011111111111      2234678999999999998743  2345 556


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       266 vdG  268 (277)
T 4fc7_A          266 ADG  268 (277)
T ss_dssp             EST
T ss_pred             ECC
Confidence            644

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=98.73  E-value=1.4e-07  Score=68.03  Aligned_cols=107  Identities=16%  Similarity=0.046  Sum_probs=73.2

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++.    +.+..+||++||.++..+                     ..+...|+.+|...+.+.+.+
T Consensus       135 ~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~l  193 (262)
T 3rkr_A          135 IAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNP---------------------VADGAAYTASKWGLNGLMTSA  193 (262)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCC---------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCC---------------------CCCCchHHHHHHHHHHHHHHH
Confidence            5789999999988865    356789999999544321                     124578999999999998877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA  146 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  146 (178)
                      +.+   .|+++..++||.+..+-....            ...     .....++..+|+|++++.++..+..
T Consensus       194 a~e~~~~gi~v~~v~PG~v~t~~~~~~------------~~~-----~~~~~~~~p~dvA~~v~~l~s~~~~  248 (262)
T 3rkr_A          194 AEELRQHQVRVSLVAPGSVRTEFGVGL------------SAK-----KSALGAIEPDDIADVVALLATQADQ  248 (262)
T ss_dssp             HHHHGGGTCEEEEEEECCC---------------------------------CCCHHHHHHHHHHHHTCCTT
T ss_pred             HHHhhhcCcEEEEEecCCCcCCccccc------------ccc-----cccccCCCHHHHHHHHHHHhcCccc
Confidence            655   589999999998865321110            000     1223467899999999999987544

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=98.73  E-value=2e-08  Score=72.02  Aligned_cols=121  Identities=11%  Similarity=0.080  Sum_probs=61.6

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++    ++.+..+||++||. +.+.                       +...|+.+|...+.+.+.+
T Consensus       117 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~-----------------------~~~~Y~asK~a~~~~~~~l  172 (253)
T 3qiv_A          117 MSVNLDGALWCTRAVYKKMTKRGGGAIVNQSST-AAWL-----------------------YSNYYGLAKVGINGLTQQL  172 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------------------------CCHHHHHHHHHHH
T ss_pred             HhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCc-cccC-----------------------CCchhHHHHHHHHHHHHHH
Confidence            578999966665554    44566799999995 3321                       2345999999999999988


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+.   |+++..++||.+.++.......   ..+......     +.....+..++|++++++.++..+.  ..| .|+
T Consensus       173 a~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~-----~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~  244 (253)
T 3qiv_A          173 SRELGGRNIRINAIAPGPIDTEANRTTTP---KEMVDDIVK-----GLPLSRMGTPDDLVGMCLFLLSDEASWITGQIFN  244 (253)
T ss_dssp             HHHTTTTTEEEEEEEC---------------------------------------CCHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHhhcCeEEEEEEecCCcccchhhcCc---HHHHHHHhc-----cCCCCCCCCHHHHHHHHHHHcCccccCCCCCEEE
Confidence            8775   7999999999998764322100   001111111     1122345678999999999886543  234 666


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +++
T Consensus       245 vdg  247 (253)
T 3qiv_A          245 VDG  247 (253)
T ss_dssp             C--
T ss_pred             ECC
Confidence            643

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=98.73  E-value=1.1e-07  Score=68.33  Aligned_cols=128  Identities=13%  Similarity=0.110  Sum_probs=79.4

Q ss_pred             chhHHHHHHHHHHH----HHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVA----AAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++.++    +++.+ .+||++||.++..+                     ..+...|+.+|...+.+.+.+
T Consensus       108 ~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~l  165 (253)
T 1hxh_A          108 LKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLP---------------------IEQYAGYSASKAAVSALTRAA  165 (253)
T ss_dssp             HHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSC---------------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred             HHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCC---------------------CCCCccHHHHHHHHHHHHHHH
Confidence            56788877666554    44556 89999999544321                     124467999999999998887


Q ss_pred             HHh---c--CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-c
Q 030406           78 AVA---R--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-R  149 (178)
Q Consensus        78 ~~~---~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~  149 (178)
                      +.+   .  |+++.++||+.++++..........  ..........  ......+.+++|+|++++.++..+.  ..| .
T Consensus       166 a~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~--~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~  241 (253)
T 1hxh_A          166 ALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGV--SKEMVLHDPK--LNRAGRAYMPERIAQLVLFLASDESSVMSGSE  241 (253)
T ss_dssp             HHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTC--CHHHHBCBTT--TBTTCCEECHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHhhhcCCCeEEEEEEeCCccCchhhhccchhh--hHHHHhhhhc--cCccCCCCCHHHHHHHHHHHcCccccCCCCcE
Confidence            655   3  8999999999998764111000000  0010111000  0112347899999999999987542  345 4


Q ss_pred             EEEecC
Q 030406          150 YLCAES  155 (178)
Q Consensus       150 ~~~~~~  155 (178)
                      +.+.+.
T Consensus       242 ~~vdgG  247 (253)
T 1hxh_A          242 LHADNS  247 (253)
T ss_dssp             EEESSS
T ss_pred             EEECCC
Confidence            456543

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=98.73  E-value=8.5e-08  Score=70.04  Aligned_cols=129  Identities=13%  Similarity=0.006  Sum_probs=83.0

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++    ++.+..++|++||.++....                   +..+...|+.+|...+.+.+.+
T Consensus       134 ~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~-------------------~~~~~~~Y~asKaa~~~l~~~l  194 (283)
T 3v8b_A          134 IAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTF-------------------TTPGATAYTATKAAQVAIVQQL  194 (283)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC-------------------CSTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCC-------------------CCCCchHHHHHHHHHHHHHHHH
Confidence            678999999999988    44566799999995443210                   0124578999999999999988


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCcccc-----CCCCcccccHHHHHHHHHHhhcCC--CCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY-----ANSVQAYVHVRDVALAHILVYETP--SAS  147 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~v~D~a~~~~~~~~~~--~~~  147 (178)
                      +.+   .|+++..++||.+..+-.........     .........     +-....+..++|+|++++.++...  ...
T Consensus       195 a~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-----~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a~~it  269 (283)
T 3v8b_A          195 ALELGKHHIRVNAVCPGAIETNISDNTKLRHE-----EETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARHVT  269 (283)
T ss_dssp             HHHTTTTTEEEEEEEECSBSSCTTCCTTBCCH-----HHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGGTTCC
T ss_pred             HHHhCccCcEEEEEEeCCCcCCcccccccccc-----hhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCccccCCc
Confidence            776   47889999999997654322110000     000000000     000134678999999999988653  234


Q ss_pred             C-cEEEec
Q 030406          148 G-RYLCAE  154 (178)
Q Consensus       148 ~-~~~~~~  154 (178)
                      | .+++.+
T Consensus       270 G~~i~vdG  277 (283)
T 3v8b_A          270 GSPVWIDG  277 (283)
T ss_dssp             SCEEEEST
T ss_pred             CCEEEECc
Confidence            5 445644

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=98.72  E-value=2.5e-07  Score=67.11  Aligned_cols=123  Identities=13%  Similarity=0.005  Sum_probs=83.3

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...  +..++|++||..+..+                    +..+...|+.+|...+.+.+.++.
T Consensus       137 ~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~--------------------~~~~~~~Y~asKaa~~~l~~~la~  196 (271)
T 3v2g_A          137 MAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELV--------------------PWPGISLYSASKAALAGLTKGLAR  196 (271)
T ss_dssp             HHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCC--------------------CSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccC--------------------CCCCchHHHHHHHHHHHHHHHHHH
Confidence            578999999999999864  3568999998533221                    012457899999999999888766


Q ss_pred             hc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEEEe
Q 030406           80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYLCA  153 (178)
Q Consensus        80 ~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~  153 (178)
                      +.   |+++..++||.+..+..... ......   .....      ....+..++|+|++++.++...  ...| .+++.
T Consensus       197 e~~~~gIrvn~v~PG~v~T~~~~~~-~~~~~~---~~~~~------~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vd  266 (271)
T 3v2g_A          197 DLGPRGITVNIVHPGSTDTDMNPAD-GDHAEA---QRERI------ATGSYGEPQDIAGLVAWLAGPQGKFVTGASLTID  266 (271)
T ss_dssp             HHGGGTCEEEEEEECSBCSSSSCSS-CSSHHH---HHHTC------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HhhhhCeEEEEEecCCCcCCccccc-chhHHH---HHhcC------CCCCCCCHHHHHHHHHHHhCcccCCccCCEEEeC
Confidence            54   89999999999987653321 111111   11111      1234678999999999988543  3345 45564


Q ss_pred             c
Q 030406          154 E  154 (178)
Q Consensus       154 ~  154 (178)
                      +
T Consensus       267 G  267 (271)
T 3v2g_A          267 G  267 (271)
T ss_dssp             T
T ss_pred             c
Confidence            4

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=98.71  E-value=1.1e-07  Score=67.95  Aligned_cols=125  Identities=14%  Similarity=0.070  Sum_probs=82.2

Q ss_pred             chhHHHHHHHHHHH----HHhCC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVA----AAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~----~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.+++++    +++.+ ..++|++||..+..+.                     .....|+.+|...+.+.+.
T Consensus       108 ~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~~~~~  166 (247)
T 3rwb_A          108 IDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT---------------------PNMAAYVAAKGGVIGFTRA  166 (247)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC---------------------TTCHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC---------------------CCchhhHHHHHHHHHHHHH
Confidence            57899999999888    44444 5799999996544321                     2446799999999999888


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cE
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RY  150 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~  150 (178)
                      ++.+   .|+++..++||.+..+............+....        .....+..++|+++++..++..+.  ..| .+
T Consensus       167 la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~--------~~~~r~~~pedva~~v~~L~s~~~~~itG~~i  238 (247)
T 3rwb_A          167 LATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML--------QAMKGKGQPEHIADVVSFLASDDARWITGQTL  238 (247)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH--------SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc--------cccCCCcCHHHHHHHHHHHhCccccCCCCCEE
Confidence            7766   589999999999976532111011111111110        112345789999999999886542  345 44


Q ss_pred             EEecC
Q 030406          151 LCAES  155 (178)
Q Consensus       151 ~~~~~  155 (178)
                      ++.+.
T Consensus       239 ~vdGG  243 (247)
T 3rwb_A          239 NVDAG  243 (247)
T ss_dssp             EESTT
T ss_pred             EECCC
Confidence            56543

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.71  E-value=1.3e-07  Score=68.38  Aligned_cols=125  Identities=13%  Similarity=0.063  Sum_probs=81.2

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEecccc-ccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIG-AVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~-~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.|+.++++++.    +.+..+||++||.+ +..+                     ..+...|+.+|...+.+.+.
T Consensus       127 ~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------------------~~~~~~Y~asK~a~~~~~~~  185 (267)
T 1vl8_A          127 IEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVT---------------------MPNISAYAASKGGVASLTKA  185 (267)
T ss_dssp             HHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCC---------------------SSSCHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccC---------------------CCCChhHHHHHHHHHHHHHH
Confidence            5789999999988774    45678999999953 2111                     12456799999999999888


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cE
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY  150 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~  150 (178)
                      ++.+   .|+++.+++||.+..+..... ...-..........      ....+++++|+|++++.++..+  ...| .+
T Consensus       186 la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~------p~~~~~~p~dvA~~v~~l~s~~~~~itG~~i  258 (267)
T 1vl8_A          186 LAKEWGRYGIRVNVIAPGWYRTKMTEAV-FSDPEKLDYMLKRI------PLGRTGVPEDLKGVAVFLASEEAKYVTGQII  258 (267)
T ss_dssp             HHHHHGGGTCEEEEEEECCBCSTTTHHH-HTCHHHHHHHHHTC------TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHhcccCeEEEEEEeccCcccccccc-ccChHHHHHHHhhC------CCCCCcCHHHHHHHHHHHcCccccCCcCCeE
Confidence            7665   489999999999976531110 00001111111111      1234788999999999988653  2345 44


Q ss_pred             EEec
Q 030406          151 LCAE  154 (178)
Q Consensus       151 ~~~~  154 (178)
                      .+.+
T Consensus       259 ~vdG  262 (267)
T 1vl8_A          259 FVDG  262 (267)
T ss_dssp             EEST
T ss_pred             EECC
Confidence            5544

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=98.70  E-value=3.2e-08  Score=72.91  Aligned_cols=120  Identities=16%  Similarity=0.107  Sum_probs=74.5

Q ss_pred             chhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.|+.++++++..    .+ ..+||++||.++..+                     ......|+.||...+.+.+.
T Consensus       136 ~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~~~~~  194 (301)
T 3tjr_A          136 IDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP---------------------NAGLGTYGVAKYGVVGLAET  194 (301)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC---------------------CTTBHHHHHHHHHHHHHHHH
T ss_pred             HHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC---------------------CCCchHHHHHHHHHHHHHHH
Confidence            57899999999998753    33 468999999655432                     12456899999999999887


Q ss_pred             HHHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCc-ccc--CCCCcccccHHHHHHHHHHhhcCC
Q 030406           77 EAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA-KTY--ANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        77 ~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      ++.+.   |+++.+++||.+..+-....  .............+ ..+  ......+++++|+|++++.+++.+
T Consensus       195 la~e~~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~  266 (301)
T 3tjr_A          195 LAREVKPNGIGVSVLCPMVVETKLVSNS--ERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILAN  266 (301)
T ss_dssp             HHHHHGGGTEEEEEECCSCCCSSHHHHH--HHHC----------------------CCCHHHHHHHHHHHHHHT
T ss_pred             HHHHhcccCcEEEEEECCcccccccccc--ccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcC
Confidence            76554   79999999999865421100  00000000000000 011  123456899999999999999875

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=98.70  E-value=1.5e-07  Score=68.60  Aligned_cols=124  Identities=16%  Similarity=0.134  Sum_probs=76.2

Q ss_pred             chhHHHHHHHHHHHHHhC----C---CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----K---VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAA   74 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~---~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~   74 (178)
                      +++|+.++.++++++...    +   ..+||++||.++.++.                     .....|+.+|...+.+.
T Consensus       137 ~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~  195 (280)
T 4da9_A          137 VGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS---------------------PERLDYCMSKAGLAAFS  195 (280)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC----------------------------CCHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC---------------------CCccHHHHHHHHHHHHH
Confidence            678999999988887642    2   4589999996544321                     24467999999999999


Q ss_pred             HHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-
Q 030406           75 WEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-  148 (178)
Q Consensus        75 ~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-  148 (178)
                      +.++.+   .|+++..++||.+..+.....    ...........    ......+..++|+|++++.++....  ..| 
T Consensus       196 ~~la~e~~~~gI~vn~v~PG~v~T~~~~~~----~~~~~~~~~~~----~~p~~r~~~pedvA~~v~~L~s~~~~~itG~  267 (280)
T 4da9_A          196 QGLALRLAETGIAVFEVRPGIIRSDMTAAV----SGKYDGLIESG----LVPMRRWGEPEDIGNIVAGLAGGQFGFATGS  267 (280)
T ss_dssp             HHHHHHHTTTTEEEEEEEECCBCC------------------------------CCBCHHHHHHHHHHHHTSTTGGGTTC
T ss_pred             HHHHHHHHHhCcEEEEEeecCCcCCchhhc----chhHHHHHhhc----CCCcCCcCCHHHHHHHHHHHhCccccCCCCC
Confidence            887766   579999999999976542211    00001111010    0122446789999999999987654  244 


Q ss_pred             cEEEec
Q 030406          149 RYLCAE  154 (178)
Q Consensus       149 ~~~~~~  154 (178)
                      .+++.+
T Consensus       268 ~i~vdG  273 (280)
T 4da9_A          268 VIQADG  273 (280)
T ss_dssp             EEEEST
T ss_pred             EEEECC
Confidence            556644

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=98.69  E-value=2.2e-07  Score=67.48  Aligned_cols=125  Identities=17%  Similarity=0.094  Sum_probs=82.6

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...  +-.+||++||.++..+                     ..+...|+.+|...+.+.+.++.
T Consensus       116 ~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asK~a~~~~~~~la~  174 (275)
T 2pd4_A          116 MEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY---------------------MAHYNVMGLAKAALESAVRYLAV  174 (275)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB---------------------CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC---------------------CCCchhhHHHHHHHHHHHHHHHH
Confidence            578999999999999875  1258999999544321                     12346799999999999988766


Q ss_pred             hc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEEEe
Q 030406           80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYLCA  153 (178)
Q Consensus        80 ~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~  153 (178)
                      +.   |+++..++||.+.++..... . .............     ....+.+++|+|++++.++..+  ...| .+++.
T Consensus       175 e~~~~gi~v~~v~PG~v~T~~~~~~-~-~~~~~~~~~~~~~-----p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vd  247 (275)
T 2pd4_A          175 DLGKHHIRVNALSAGPIRTLASSGI-A-DFRMILKWNEINA-----PLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVD  247 (275)
T ss_dssp             HHHTTTCEEEEEEECCCCCTTGGGS-T-THHHHHHHHHHHS-----TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HhhhcCeEEEEEeeCccccchhhhc-c-ccHHHHHHHHhcC-----CcCCCCCHHHHHHHHHHHhCccccCCCCCEEEEC
Confidence            64   89999999999987642211 1 1111111111111     1123578999999999988643  2345 44554


Q ss_pred             c
Q 030406          154 E  154 (178)
Q Consensus       154 ~  154 (178)
                      +
T Consensus       248 g  248 (275)
T 2pd4_A          248 A  248 (275)
T ss_dssp             T
T ss_pred             C
Confidence            4

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=98.69  E-value=1.2e-07  Score=68.67  Aligned_cols=123  Identities=13%  Similarity=0.027  Sum_probs=81.3

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..++|++||..+..+.                     .+...|+.+|...+.+.+.+
T Consensus       135 ~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~l  193 (271)
T 4iin_A          135 IDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGN---------------------MGQTNYSASKGGMIAMSKSF  193 (271)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCC---------------------CCchHhHHHHHHHHHHHHHH
Confidence            57899999888887753    356799999996554321                     24578999999999999887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+   .++.+..++||.+..+-....    .......     .........+.+++|+|++++.++..+.  ..| .++
T Consensus       194 a~e~~~~gi~v~~v~PG~v~T~~~~~~----~~~~~~~-----~~~~~~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~  264 (271)
T 4iin_A          194 AYEGALRNIRFNSVTPGFIETDMNANL----KDELKAD-----YVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLK  264 (271)
T ss_dssp             HHHHHTTTEEEEEEEECSBCCC---------------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHhCcEEEEEEeCcccCCchhhh----cHHHHHH-----HHhcCCcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEE
Confidence            766   589999999999865532110    0000000     0001123457899999999999987543  345 556


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +++
T Consensus       265 vdG  267 (271)
T 4iin_A          265 VNG  267 (271)
T ss_dssp             EST
T ss_pred             eCC
Confidence            654

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=98.69  E-value=1.1e-07  Score=74.64  Aligned_cols=128  Identities=13%  Similarity=0.098  Sum_probs=88.5

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.|+.+|.+++++.+.++||++||++++++..                     ....|+.+|...+.+..+.. ..
T Consensus       334 ~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~---------------------g~~~Yaaaka~l~~la~~~~-~~  391 (486)
T 2fr1_A          334 SRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAP---------------------GLGGYAPGNAYLDGLAQQRR-SD  391 (486)
T ss_dssp             THHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCT---------------------TCTTTHHHHHHHHHHHHHHH-HT
T ss_pred             HHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCC---------------------CCHHHHHHHHHHHHHHHHHH-hc
Confidence            578999999999999988889999999976666421                     33679999999999887654 56


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEEecCccCHHH
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGE  161 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e  161 (178)
                      |+++++++||.+.+++....   .   ..       ..+......+++.+|+++++..++..+..  .+.+.  .+.|..
T Consensus       392 gi~v~~i~pG~~~~~gm~~~---~---~~-------~~~~~~g~~~i~~e~~a~~l~~~l~~~~~--~~~v~--~~d~~~  454 (486)
T 2fr1_A          392 GLPATAVAWGTWAGSGMAEG---P---VA-------DRFRRHGVIEMPPETACRALQNALDRAEV--CPIVI--DVRWDR  454 (486)
T ss_dssp             TCCCEEEEECCBC-------------------------CTTTTEECBCHHHHHHHHHHHHHTTCS--SCEEC--EECHHH
T ss_pred             CCeEEEEECCeeCCCcccch---h---HH-------HHHHhcCCCCCCHHHHHHHHHHHHhCCCC--eEEEE--eCCHHH
Confidence            99999999998876531110   0   00       01112345689999999999999987543  23322  256777


Q ss_pred             HHHHHHH
Q 030406          162 VVEILAK  168 (178)
Q Consensus       162 ~~~~i~~  168 (178)
                      +...+..
T Consensus       455 ~~~~~~~  461 (486)
T 2fr1_A          455 FLLAYTA  461 (486)
T ss_dssp             HHHHHTS
T ss_pred             Hhhhhcc
Confidence            6665443

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=98.69  E-value=1.2e-07  Score=68.28  Aligned_cols=127  Identities=17%  Similarity=0.055  Sum_probs=81.1

Q ss_pred             chhHHHHHHHHHHHHHh----CCC-CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++..    .+. .+||++||.++..+.                     .+...|+.+|...+.+.+.
T Consensus       109 ~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~~sK~a~~~~~~~  167 (258)
T 3a28_C          109 YSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF---------------------PILSAYSTTKFAVRGLTQA  167 (258)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHH
T ss_pred             HHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCC---------------------CCchhHHHHHHHHHHHHHH
Confidence            57899999999988875    355 799999996443211                     2346799999999999887


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChh------h-HHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNA------S-IIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--  144 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--  144 (178)
                      ++.+   .|+++.+++||.+..+........      . ...........     .....+.+++|+|++++.++..+  
T Consensus       168 la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~r~~~p~dvA~~v~~l~s~~~~  242 (258)
T 3a28_C          168 AAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSS-----IALGRPSVPEDVAGLVSFLASENSN  242 (258)
T ss_dssp             HHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTT-----CTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhc-----CCCCCccCHHHHHHHHHHHhCcccC
Confidence            7655   489999999999865421100000      0 00000111111     11234789999999999998654  


Q ss_pred             CCCC-cEEEec
Q 030406          145 SASG-RYLCAE  154 (178)
Q Consensus       145 ~~~~-~~~~~~  154 (178)
                      ...| .+.+.+
T Consensus       243 ~~tG~~i~vdG  253 (258)
T 3a28_C          243 YVTGQVMLVDG  253 (258)
T ss_dssp             TCCSCEEEESS
T ss_pred             CCCCCEEEECC
Confidence            2345 445644

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=98.68  E-value=2.7e-08  Score=72.21  Aligned_cols=103  Identities=16%  Similarity=0.036  Sum_probs=75.1

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..+||++||..+..+                     ..+...|+.+|...|.+.+.+
T Consensus       136 ~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~l~~~l  194 (272)
T 1yb1_A          136 FEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS---------------------VPFLLAYCSSKFAAVGFHKTL  194 (272)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC---------------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC---------------------CCCchhHHHHHHHHHHHHHHH
Confidence            5789999777776664    456789999999543221                     124567999999999999887


Q ss_pred             HHhc------CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVAR------GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~~------~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+.      |+++.++||+.+.++....    ..               .....+++++|+|++++.++..+
T Consensus       195 a~e~~~~~~~gi~v~~v~Pg~v~t~~~~~----~~---------------~~~~~~~~~~dva~~i~~~~~~~  248 (272)
T 1yb1_A          195 TDELAALQITGVKTTCLCPNFVNTGFIKN----PS---------------TSLGPTLEPEEVVNRLMHGILTE  248 (272)
T ss_dssp             HHHHHHTTCTTEEEEEEEETHHHHCSTTC----TH---------------HHHCCCCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHhCCCCeEEEEEeCCcccCCcccc----cc---------------ccccCCCCHHHHHHHHHHHHHcC
Confidence            7654      7999999999987654211    00               01134789999999999999875

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.68  E-value=3.7e-07  Score=65.19  Aligned_cols=122  Identities=15%  Similarity=0.095  Sum_probs=81.1

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..++|++||.+ .++.                     .....|+.+|...+.+.+.+
T Consensus       105 ~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~---------------------~~~~~Y~asK~a~~~~~~~l  162 (245)
T 1uls_A          105 LRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGN---------------------LGQANYAASMAGVVGLTRTL  162 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCC---------------------CCchhHHHHHHHHHHHHHHH
Confidence            57899999999888764    3568999999954 4421                     13467999999999988876


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~  151 (178)
                      +.+   .|+++.+++||.+..+-.... ...  ......... +     ...+++++|+|++++.++..+  ...| .+.
T Consensus       163 a~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~--~~~~~~~~~-p-----~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~  233 (245)
T 1uls_A          163 ALELGRWGIRVNTLAPGFIETRMTAKV-PEK--VREKAIAAT-P-----LGRAGKPLEVAYAALFLLSDESSFITGQVLF  233 (245)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCTTTSSS-CHH--HHHHHHHTC-T-----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHhHhCeEEEEEEeCcCcCcchhhc-CHH--HHHHHHhhC-C-----CCCCcCHHHHHHHHHHHhCchhcCCcCCEEE
Confidence            554   489999999999976542221 111  111111111 1     123789999999999988753  2345 445


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       234 vdg  236 (245)
T 1uls_A          234 VDG  236 (245)
T ss_dssp             EST
T ss_pred             ECC
Confidence            644

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=98.68  E-value=3.8e-07  Score=66.39  Aligned_cols=125  Identities=14%  Similarity=0.087  Sum_probs=83.8

Q ss_pred             chhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.++++++...   +..++|++||.++..+                     ......|+.+|.+.+.+.+.++
T Consensus       136 ~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaal~~~~~~la  194 (280)
T 3nrc_A          136 HDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKA---------------------MPSYNTMGVAKASLEATVRYTA  194 (280)
T ss_dssp             HHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSC---------------------CTTTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccC---------------------CCCchhhHHHHHHHHHHHHHHH
Confidence            578999999999998752   3469999999644321                     1245689999999999988776


Q ss_pred             Hh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEEE
Q 030406           79 VA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLC  152 (178)
Q Consensus        79 ~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~  152 (178)
                      .+   .|+.+..++||.+..+......  ............     .....+..++|+|++++.++....  ..| .+++
T Consensus       195 ~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~-----~p~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~v  267 (280)
T 3nrc_A          195 LALGEDGIKVNAVSAGPIKTLAASGIS--NFKKMLDYNAMV-----SPLKKNVDIMEVGNTVAFLCSDMATGITGEVVHV  267 (280)
T ss_dssp             HHHGGGTCEEEEEEECCCCCSGGGGCT--THHHHHHHHHHH-----STTCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEE
T ss_pred             HHHHHcCcEEEEEeeccccchhhhcCc--chHHHHHHHHhc-----CCCCCCCCHHHHHHHHHHHhCcccCCcCCcEEEE
Confidence            55   5899999999999876432211  111111111111     112346789999999999987532  345 5566


Q ss_pred             ec
Q 030406          153 AE  154 (178)
Q Consensus       153 ~~  154 (178)
                      .+
T Consensus       268 dg  269 (280)
T 3nrc_A          268 DA  269 (280)
T ss_dssp             ST
T ss_pred             CC
Confidence            44

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=98.67  E-value=5.8e-07  Score=65.06  Aligned_cols=128  Identities=13%  Similarity=0.023  Sum_probs=82.5

Q ss_pred             chhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~--~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.|+.++++++...-  -.++|++||..+...                    +..+...|+.+|...+.+.+.++.
T Consensus       124 ~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------------~~~~~~~Y~asKaa~~~~~~~la~  183 (270)
T 3is3_A          124 FSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDF--------------------SVPKHSLYSGSKGAVDSFVRIFSK  183 (270)
T ss_dssp             HHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTC--------------------CCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccC--------------------CCCCCchhHHHHHHHHHHHHHHHH
Confidence            6789999999999998743  348999999531110                    112457799999999999988776


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCC--------hhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CC
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTV--------NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SA  146 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~  146 (178)
                      +   .|+++..++||.+..+......        ..............     .....+.+++|+|++++.++...  ..
T Consensus       184 e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~r~~~p~dvA~~v~~L~s~~~~~i  258 (270)
T 3is3_A          184 DCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHA-----SPLHRNGWPQDVANVVGFLVSKEGEWV  258 (270)
T ss_dssp             HHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHH-----STTCSCBCHHHHHHHHHHHTSGGGTTC
T ss_pred             HhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhc-----CCCCCCCCHHHHHHHHHHHcCCccCCc
Confidence            6   4899999999999765321000        00011111111111     12334678999999999988643  23


Q ss_pred             CC-cEEEec
Q 030406          147 SG-RYLCAE  154 (178)
Q Consensus       147 ~~-~~~~~~  154 (178)
                      .| .+++.+
T Consensus       259 tG~~i~vdG  267 (270)
T 3is3_A          259 NGKVLTLDG  267 (270)
T ss_dssp             CSCEEEEST
T ss_pred             cCcEEEeCC
Confidence            45 445644

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=98.67  E-value=6.9e-07  Score=63.93  Aligned_cols=125  Identities=14%  Similarity=0.105  Sum_probs=83.9

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...  +..++|++||.++..+                     ......|+.+|...+.+.+.++.
T Consensus       119 ~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~~~~~la~  177 (255)
T 3icc_A          119 VSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS---------------------LPDFIAYSMTKGAINTMTFTLAK  177 (255)
T ss_dssp             HHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSC---------------------CTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             HhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccC---------------------CCCcchhHHhHHHHHHHHHHHHH
Confidence            578999999999999875  3458999999544321                     12346799999999999888766


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEEEe
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYLCA  153 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~  153 (178)
                      +   .|+.+..++||.+..+-........  .........     .....+.+++|++++++.++...  ...| .++++
T Consensus       178 e~~~~gi~v~~v~PG~v~t~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vd  250 (255)
T 3icc_A          178 QLGARGITVNAILPGFVKTDMNAELLSDP--MMKQYATTI-----SAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVS  250 (255)
T ss_dssp             HHGGGTCEEEEEEECCBCCSSSTTTTTSH--HHHHHHHHT-----STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHhcCeEEEEEEEeeecccchhhhcccH--HHHHhhhcc-----CCcCCCCCHHHHHHHHHHHhCcccCCccCCEEEec
Confidence            5   4899999999999765432211111  111111111     12345678999999999888643  2345 55565


Q ss_pred             c
Q 030406          154 E  154 (178)
Q Consensus       154 ~  154 (178)
                      +
T Consensus       251 g  251 (255)
T 3icc_A          251 G  251 (255)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=98.67  E-value=7.4e-07  Score=65.44  Aligned_cols=125  Identities=14%  Similarity=0.025  Sum_probs=83.9

Q ss_pred             chhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~--~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...-  ..+||++||.++..+                     ......|+.+|...+.+.+.++.
T Consensus       140 ~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~---------------------~~~~~~Y~asKaal~~l~~~la~  198 (296)
T 3k31_A          140 MHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKV---------------------VPHYNVMGVCKAALEASVKYLAV  198 (296)
T ss_dssp             HHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC---------------------CTTTTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccC---------------------CCCchhhHHHHHHHHHHHHHHHH
Confidence            5789999999999998642  358999999644321                     12446799999999999888766


Q ss_pred             hc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEEEe
Q 030406           80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYLCA  153 (178)
Q Consensus        80 ~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~  153 (178)
                      +.   |+++..++||.+..+..... . .............     ....+..++|+|++++.++...  ...| .+++.
T Consensus       199 e~~~~gIrvn~v~PG~v~T~~~~~~-~-~~~~~~~~~~~~~-----p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vd  271 (296)
T 3k31_A          199 DLGKQQIRVNAISAGPVRTLASSGI-S-DFHYILTWNKYNS-----PLRRNTTLDDVGGAALYLLSDLGRGTTGETVHVD  271 (296)
T ss_dssp             HHHTTTEEEEEEEECCCCCSSCCSC-H-HHHHHHHHHHHHS-----TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHhhcCcEEEEEEECCCcCchhhcc-c-chHHHHHHHHhcC-----CCCCCCCHHHHHHHHHHHcCCccCCccCCEEEEC
Confidence            54   79999999999987653321 1 1111111111111     1234567999999999998753  3345 55664


Q ss_pred             c
Q 030406          154 E  154 (178)
Q Consensus       154 ~  154 (178)
                      +
T Consensus       272 G  272 (296)
T 3k31_A          272 C  272 (296)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=98.67  E-value=4.3e-07  Score=65.52  Aligned_cols=125  Identities=13%  Similarity=0.063  Sum_probs=83.7

Q ss_pred             chhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~--~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...-  -.+||++||.++..+                     ......|+.+|...+.+.+.++.
T Consensus       119 ~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~~~~~la~  177 (266)
T 3oig_A          119 HNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELV---------------------MPNYNVMGVAKASLDASVKYLAA  177 (266)
T ss_dssp             HHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC---------------------CTTTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhHHHHHHHHHHHHhhcCCCceEEEEeccccccc---------------------CCCcchhHHHHHHHHHHHHHHHH
Confidence            5789999999999998642  358999999644332                     12446799999999999887766


Q ss_pred             hc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEEEe
Q 030406           80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLCA  153 (178)
Q Consensus        80 ~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~  153 (178)
                      +.   |+++..++||.+..+...... . ............     ....+.+++|+|++++.++..+.  ..| .+++.
T Consensus       178 e~~~~gi~v~~v~PG~v~T~~~~~~~-~-~~~~~~~~~~~~-----~~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vd  250 (266)
T 3oig_A          178 DLGKENIRVNSISAGPIRTLSAKGIS-D-FNSILKDIEERA-----PLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVD  250 (266)
T ss_dssp             HHGGGTEEEEEEEECCCCSGGGTTCT-T-HHHHHHHHHHHS-----TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHhhcCcEEEEEecCccccccccccc-c-hHHHHHHHHhcC-----CCCCCCCHHHHHHHHHHHcCCchhcCcCCEEEEC
Confidence            53   799999999999775432211 1 111111111111     12346789999999999987532  345 55664


Q ss_pred             c
Q 030406          154 E  154 (178)
Q Consensus       154 ~  154 (178)
                      +
T Consensus       251 G  251 (266)
T 3oig_A          251 S  251 (266)
T ss_dssp             T
T ss_pred             C
Confidence            4

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=98.66  E-value=1.4e-07  Score=70.34  Aligned_cols=128  Identities=22%  Similarity=0.303  Sum_probs=80.2

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++    ++.+..+||++||.++..+.                     .....|+.||...+.+.+.+
T Consensus       111 ~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~---------------------~~~~~Y~aSK~a~~~~~~~l  169 (327)
T 1jtv_A          111 LDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL---------------------PFNDVYCASKFALEGLCESL  169 (327)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC---------------------CCChHHHHHHHHHHHHHHHH
Confidence            678999999999986    34467899999996443321                     13467999999999999887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhh----------HH-HHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNAS----------II-HILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~----------~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      +.+   .|+++.+++||.|..+-........          .. .+...........   .+-.+.++|+|++++.++..
T Consensus       170 a~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~pedvA~~i~~l~~~  246 (327)
T 1jtv_A          170 AVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVF---REAAQNPEEVAEVFLTALRA  246 (327)
T ss_dssp             HHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHH---HHHCBCHHHHHHHHHHHHHC
T ss_pred             HHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhh---hhcCCCHHHHHHHHHHHHcC
Confidence            664   6899999999999765321110000          00 0000000000000   01125799999999999987


Q ss_pred             CCCCCcEEEe
Q 030406          144 PSASGRYLCA  153 (178)
Q Consensus       144 ~~~~~~~~~~  153 (178)
                      +.....|+.+
T Consensus       247 ~~~~~~~~tg  256 (327)
T 1jtv_A          247 PKPTLRYFTT  256 (327)
T ss_dssp             SSCCSEEESC
T ss_pred             CCCCeEEEeC
Confidence            6555566654

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.66  E-value=1.8e-07  Score=68.10  Aligned_cols=127  Identities=13%  Similarity=0.116  Sum_probs=82.2

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+ .++|++||..+..+.                    ..+...|+.+|...+.+.+.+
T Consensus       118 ~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~--------------------~~~~~~Y~asK~a~~~~~~~l  176 (280)
T 1xkq_A          118 LKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA--------------------QPDFLYYAIAKAALDQYTRST  176 (280)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC--------------------CCSSHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC--------------------CCcccHHHHHHHHHHHHHHHH
Confidence            57899999999988864    24 799999995332210                    023467999999999998887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCC--Chh---hHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC---CC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQST--VNA---SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP---SA  146 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~  146 (178)
                      +.+   .|+++.+++||.+.++.....  ...   ............     .....+.+++|+|++++.++..+   ..
T Consensus       177 a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~~~~~pedvA~~v~~l~s~~~~~~~  251 (280)
T 1xkq_A          177 AIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKEC-----IPIGAAGKPEHIANIILFLADRNLSFYI  251 (280)
T ss_dssp             HHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT-----CTTSSCBCHHHHHHHHHHHHCHHHHTTC
T ss_pred             HHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcC-----CCCCCCCCHHHHHHHHHHhcCcccccCc
Confidence            643   589999999999987642111  000   000111111111     11235789999999999988643   33


Q ss_pred             CC-cEEEec
Q 030406          147 SG-RYLCAE  154 (178)
Q Consensus       147 ~~-~~~~~~  154 (178)
                      .| .+++.+
T Consensus       252 tG~~i~vdg  260 (280)
T 1xkq_A          252 LGQSIVADG  260 (280)
T ss_dssp             CSCEEEEST
T ss_pred             cCCeEEECC
Confidence            45 556644

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=98.66  E-value=1.1e-07  Score=68.42  Aligned_cols=129  Identities=16%  Similarity=0.059  Sum_probs=80.5

Q ss_pred             chhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~--~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.|+.++++++...-  -.++|++||..+....                    ......|+.+|...+.+.+.++.
T Consensus       115 ~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------------~~~~~~Y~asKaa~~~l~~~la~  174 (259)
T 3edm_A          115 LDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGG--------------------GPGALAYATSKGAVMTFTRGLAK  174 (259)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCC--------------------STTCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCC--------------------CCCcHHHHHHHHHHHHHHHHHHH
Confidence            5789999999999998753  2489999995443110                    12456799999999999998877


Q ss_pred             hcC--CcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEEEec
Q 030406           80 ARG--VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLCAE  154 (178)
Q Consensus        80 ~~~--~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  154 (178)
                      +.+  +.+..++||.+..+.......   .........     ......+.+++|+|++++.++....  ..| .+++.|
T Consensus       175 e~~~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~-----~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdG  246 (259)
T 3edm_A          175 EVGPKIRVNAVCPGMISTTFHDTFTK---PEVRERVAG-----ATSLKREGSSEDVAGLVAFLASDDAAYVTGACYDING  246 (259)
T ss_dssp             HHTTTCEEEEEEECCBCC------------------------------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESB
T ss_pred             HHCCCCEEEEEEECCCcCcccccccC---hHHHHHHHh-----cCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECC
Confidence            654  788889999886653211100   000111101     1123456789999999999886542  245 567765


Q ss_pred             CccC
Q 030406          155 SVLH  158 (178)
Q Consensus       155 ~~~s  158 (178)
                      ....
T Consensus       247 g~~~  250 (259)
T 3edm_A          247 GVLF  250 (259)
T ss_dssp             CSSB
T ss_pred             CcCC
Confidence            4443

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=98.66  E-value=1.6e-07  Score=69.62  Aligned_cols=128  Identities=16%  Similarity=0.085  Sum_probs=82.5

Q ss_pred             chhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++..    .+ -.+||++||..+..+.                     .....|+.+|...+.+.+.
T Consensus       163 ~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~  221 (317)
T 3oec_A          163 LQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA---------------------PGQSHYAASKHGVQGLMLS  221 (317)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC---------------------TTBHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC---------------------CCCcchHHHHHHHHHHHHH
Confidence            57899999999988853    22 4579999996443321                     2446799999999999988


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCC----------hhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTV----------NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      ++.+   .|+++..++||.+.++......          .............    .......+++++|+|++++.++..
T Consensus       222 la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~pedvA~av~fL~s~  297 (317)
T 3oec_A          222 LANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQ----LTLLPIPWVEPEDVSNAVAWLASD  297 (317)
T ss_dssp             HHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTT----TCSSSSSSBCHHHHHHHHHHHTSG
T ss_pred             HHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhh----hccCCCCCCCHHHHHHHHHHHcCC
Confidence            7766   4899999999999775311100          0000000010000    011225688999999999988864


Q ss_pred             C--CCCC-cEEEec
Q 030406          144 P--SASG-RYLCAE  154 (178)
Q Consensus       144 ~--~~~~-~~~~~~  154 (178)
                      .  ...| .+++.+
T Consensus       298 ~a~~itG~~i~vdG  311 (317)
T 3oec_A          298 EARYIHGAAIPVDG  311 (317)
T ss_dssp             GGTTCCSCEEEEST
T ss_pred             cccCCCCCEEEECc
Confidence            3  2345 556654

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=98.65  E-value=2.2e-07  Score=67.32  Aligned_cols=136  Identities=16%  Similarity=0.134  Sum_probs=84.5

Q ss_pred             chhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.++++++...   +..++|++||..+.++.                     .....|+.+|...+.+.+.++
T Consensus       111 ~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~~~~~la  169 (270)
T 1yde_A          111 LELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ---------------------AQAVPYVATKGAVTAMTKALA  169 (270)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC---------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCC---------------------CCCcccHHHHHHHHHHHHHHH
Confidence            578999999999988631   24799999996555431                     134679999999999998876


Q ss_pred             Hh---cCCcEEEecCCceeCCCCCC---CChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC-CCCC-cE
Q 030406           79 VA---RGVDLVVVNPVLVLGPLLQS---TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP-SASG-RY  150 (178)
Q Consensus        79 ~~---~~~~~~i~R~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-~~~~-~~  150 (178)
                      .+   .|+++.++|||.++++....   ........+.......      ....+...+|+|++++.++... ...| .+
T Consensus       170 ~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------p~~r~~~p~dva~~v~~L~s~~~~itG~~i  243 (270)
T 1yde_A          170 LDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQ------PLGRMGQPAEVGAAAVFLASEANFCTGIEL  243 (270)
T ss_dssp             HHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTS------TTSSCBCHHHHHHHHHHHHHHCTTCCSCEE
T ss_pred             HHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcC------CCCCCcCHHHHHHHHHHHcccCCCcCCCEE
Confidence            54   58999999999998763110   0000011111111111      1123678999999998887642 2345 55


Q ss_pred             EE-ecCccCHHHHHH
Q 030406          151 LC-AESVLHRGEVVE  164 (178)
Q Consensus       151 ~~-~~~~~s~~e~~~  164 (178)
                      .+ ++..+.+.....
T Consensus       244 ~vdGG~~~~~~~~~~  258 (270)
T 1yde_A          244 LVTGGAELGYGCKAS  258 (270)
T ss_dssp             EESTTTTSCC-----
T ss_pred             EECCCeecccCcCcc
Confidence            56 444555544433

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=98.65  E-value=7.1e-07  Score=64.38  Aligned_cols=125  Identities=15%  Similarity=0.074  Sum_probs=83.1

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++    ++.+..++|++||.++.++..                   ..+...|+.+|...+.+.+.+
T Consensus       129 ~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------------~~~~~~Y~~sK~a~~~~~~~l  189 (267)
T 3gdg_A          129 VQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANF-------------------PQEQTSYNVAKAGCIHMARSL  189 (267)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCS-------------------SSCCHHHHHHHHHHHHHHHHH
T ss_pred             HHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCC-------------------CCCCCcchHHHHHHHHHHHHH
Confidence            578999999999888    344567999999965443210                   024567999999999999988


Q ss_pred             HHhcC--CcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEEE
Q 030406           78 AVARG--VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLC  152 (178)
Q Consensus        78 ~~~~~--~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~  152 (178)
                      +.+.+  +.+..+.||.+-.+-.... ..   .........     .....+.+++|++++++.++....  ..| .+++
T Consensus       190 a~e~~~~i~v~~v~PG~v~t~~~~~~-~~---~~~~~~~~~-----~~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~v  260 (267)
T 3gdg_A          190 ANEWRDFARVNSISPGYIDTGLSDFV-PK---ETQQLWHSM-----IPMGRDGLAKELKGAYVYFASDASTYTTGADLLI  260 (267)
T ss_dssp             HHHTTTTCEEEEEEECCEECSCGGGS-CH---HHHHHHHTT-----STTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEE
T ss_pred             HHHhccCcEEEEEECCccccchhhhC-CH---HHHHHHHhc-----CCCCCCcCHHHHHhHhheeecCccccccCCEEEE
Confidence            87765  6777899998865432111 11   111222121     123457789999999999886532  345 4456


Q ss_pred             ec
Q 030406          153 AE  154 (178)
Q Consensus       153 ~~  154 (178)
                      ++
T Consensus       261 dg  262 (267)
T 3gdg_A          261 DG  262 (267)
T ss_dssp             ST
T ss_pred             CC
Confidence            44

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=98.65  E-value=1.9e-07  Score=67.97  Aligned_cols=123  Identities=13%  Similarity=0.059  Sum_probs=79.6

Q ss_pred             chhHHHHHHHHHHHHH----hCCC----CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCc-hHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKV----RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKN-WYCYGKAVAEK   72 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~----~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~-~Y~~sK~~~E~   72 (178)
                      +++|+.++.++++++.    +.+.    .+||++||.++..+.                     .... .|+.+|...+.
T Consensus       133 ~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~---------------------~~~~~~Y~asK~a~~~  191 (276)
T 2b4q_A          133 MQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM---------------------GEQAYAYGPSKAALHQ  191 (276)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC---------------------CCSCTTHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC---------------------CCCccccHHHHHHHHH
Confidence            5789999988887765    3343    799999995443211                     1223 79999999999


Q ss_pred             HHHHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhC--CccccCCCCcccccHHHHHHHHHHhhcCC--C
Q 030406           73 AAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNG--SAKTYANSVQAYVHVRDVALAHILVYETP--S  145 (178)
Q Consensus        73 ~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~  145 (178)
                      +.+.++.+   .|+++.+++||.+..+-...    ...........  ..     ....+.+++|+|++++.++..+  .
T Consensus       192 ~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----~~~~~~~~~~~~~~~-----p~~r~~~p~dvA~~v~~l~s~~~~~  262 (276)
T 2b4q_A          192 LSRMLAKELVGEHINVNVIAPGRFPSRMTRH----IANDPQALEADSASI-----PMGRWGRPEEMAALAISLAGTAGAY  262 (276)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCCCSTTTHH----HHHCHHHHHHHHHTS-----TTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHhcccCeEEEEEEeccCcCcchhh----cchhHHHHHHhhcCC-----CCCCcCCHHHHHHHHHHHhCccccC
Confidence            99887655   48999999999997653211    00001111111  11     1234789999999999998754  2


Q ss_pred             CCC-cEEEec
Q 030406          146 ASG-RYLCAE  154 (178)
Q Consensus       146 ~~~-~~~~~~  154 (178)
                      ..| .+.+.+
T Consensus       263 ~tG~~i~vdG  272 (276)
T 2b4q_A          263 MTGNVIPIDG  272 (276)
T ss_dssp             CCSCEEEEST
T ss_pred             CCCCEEEeCC
Confidence            345 445644

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=98.64  E-value=1.6e-07  Score=68.15  Aligned_cols=125  Identities=11%  Similarity=0.140  Sum_probs=82.6

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..+||++||..+..+                     ..+...|+.+|...+.+.+.+
T Consensus       131 ~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~l  189 (271)
T 4ibo_A          131 IDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELA---------------------RATVAPYTVAKGGIKMLTRAM  189 (271)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB---------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCC---------------------CCCchhHHHHHHHHHHHHHHH
Confidence            67899999999877754    35579999999654432                     124567999999999999887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+   .|+++..++||.+..+...... .. ..........     .....+..++|+|++++.++....  ..| .++
T Consensus       190 a~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~-~~~~~~~~~~-----~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~  262 (271)
T 4ibo_A          190 AAEWAQYGIQANAIGPGYMLTDMNQALI-DN-PEFDAWVKAR-----TPAKRWGKPQELVGTAVFLSASASDYVNGQIIY  262 (271)
T ss_dssp             HHHHGGGTEEEEEEEECSBCSGGGHHHH-HC-HHHHHHHHHH-----STTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHhhhCeEEEEEEeccEeCcchhhcc-cC-HHHHHHHHhc-----CCCCCCcCHHHHHHHHHHHhCccccCCCCcEEE
Confidence            665   5899999999999765321100 00 0111111111     122346789999999998886532  345 556


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       263 vdG  265 (271)
T 4ibo_A          263 VDG  265 (271)
T ss_dssp             EST
T ss_pred             ECC
Confidence            644

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=98.64  E-value=3e-07  Score=65.83  Aligned_cols=114  Identities=18%  Similarity=0.111  Sum_probs=73.4

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++.    +.+..+||++||.++..+                     ..+...|+.+|...+.+.+.+
T Consensus       103 ~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~~~~~l  161 (248)
T 3asu_A          103 IDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP---------------------YAGGNVYGATKAFVRQFSLNL  161 (248)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccC---------------------CCCCchHHHHHHHHHHHHHHH
Confidence            5789999999888876    345689999999544321                     124468999999999999887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   .|+++..++||.+.|......   ....-......   ..  ....++.++|+|++++.++..+
T Consensus       162 a~e~~~~gi~v~~v~PG~v~gT~~~~~---~~~~~~~~~~~---~~--~~~~~~~p~dvA~~v~~l~s~~  223 (248)
T 3asu_A          162 RTDLHGTAVRVTDIEPGLVGGTEFSNV---RFKGDDGKAEK---TY--QNTVALTPEDVSEAVWWVSTLP  223 (248)
T ss_dssp             HHHTTTSCCEEEEEEECSBCC------------------------------CCBCHHHHHHHHHHHHHSC
T ss_pred             HHHhhhcCcEEEEEeccccccCcchhh---cccCchHHHHH---HH--hccCCCCHHHHHHHHHHHhcCC
Confidence            765   379999999999985321110   00000000000   00  1123468999999999998764

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=98.64  E-value=1.3e-07  Score=67.93  Aligned_cols=127  Identities=15%  Similarity=0.039  Sum_probs=80.7

Q ss_pred             chhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++..    .+ ..++|++||..+.++.                     .....|+.+|...+.+.+.
T Consensus       107 ~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~  165 (256)
T 1geg_A          107 YNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN---------------------PELAVYSSSKFAVRGLTQT  165 (256)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------------------TTBHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC---------------------CCchhHHHHHHHHHHHHHH
Confidence            57899999888877764    34 5799999996544321                     1346799999999999888


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChh--h-----HHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNA--S-----IIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--  144 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--  144 (178)
                      ++.+   .|+++.+++||.+.++........  .     ...........     .....+.+++|+|++++.++..+  
T Consensus       166 la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~r~~~p~dvA~~v~~l~s~~~~  240 (256)
T 1geg_A          166 AARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKR-----ITLGRLSEPEDVAACVSYLASPDSD  240 (256)
T ss_dssp             HHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTT-----CTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhc-----CCCCCCcCHHHHHHHHHHHhCcccc
Confidence            7654   489999999999976531100000  0     00000111111     11234789999999999988654  


Q ss_pred             CCCC-cEEEec
Q 030406          145 SASG-RYLCAE  154 (178)
Q Consensus       145 ~~~~-~~~~~~  154 (178)
                      ...| .+.+.+
T Consensus       241 ~~tG~~i~vdG  251 (256)
T 1geg_A          241 YMTGQSLLIDG  251 (256)
T ss_dssp             TCCSCEEEESS
T ss_pred             CCCCCEEEeCC
Confidence            2345 445544

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.63  E-value=4.8e-09  Score=78.25  Aligned_cols=85  Identities=13%  Similarity=-0.007  Sum_probs=63.4

Q ss_pred             chhHHHHHHHHHHHHHhCC-CC-EEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAK-VR-RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~-~~-~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      ++.|+.+++++++++++.+ .+ +++++|+......     +   +.++..    ....|.+.|+.+|+.+|++...+++
T Consensus       102 ~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~-----~---~~~~~~----~~~~p~~~yg~tkl~~er~~~~~a~  169 (327)
T 1y7t_A          102 LQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA-----L---IAYKNA----PGLNPRNFTAMTRLDHNRAKAQLAK  169 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH-----H---HHHHTC----TTSCGGGEEECCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH-----H---HHHHHc----CCCChhheeccchHHHHHHHHHHHH
Confidence            5789999999999999975 54 7888887421110     0   111110    0124567799999999999999998


Q ss_pred             hcCCcEEEecCCceeCCCC
Q 030406           80 ARGVDLVVVNPVLVLGPLL   98 (178)
Q Consensus        80 ~~~~~~~i~R~~~v~G~~~   98 (178)
                      ..|++.+++|+++|||++.
T Consensus       170 ~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          170 KTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             HHTCCGGGEECCEEEBCSS
T ss_pred             HhCcChhheeeeEEEcCCC
Confidence            8999999999999999874

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=98.63  E-value=1.4e-07  Score=67.67  Aligned_cols=120  Identities=15%  Similarity=0.018  Sum_probs=79.5

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++    ++.+..++|++||..+..+.                     .....|+.+|...+.+.+.+
T Consensus       121 ~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~l~~~l  179 (252)
T 3f1l_A          121 MQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGR---------------------ANWGAYAASKFATEGMMQVL  179 (252)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCC---------------------CCCchhHHHHHHHHHHHHHH
Confidence            678999999999988    44566799999996443321                     24467999999999999988


Q ss_pred             HHhcC--CcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEEE
Q 030406           78 AVARG--VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLC  152 (178)
Q Consensus        78 ~~~~~--~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~  152 (178)
                      +.+.+  +.+..+.||.+..+-        .   ......      .....+..++|++++++.++..+.  ..| .+.+
T Consensus       180 a~e~~~~irvn~v~PG~v~t~~--------~---~~~~~~------~~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~v  242 (252)
T 3f1l_A          180 ADEYQQRLRVNCINPGGTRTAM--------R---ASAFPT------EDPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDA  242 (252)
T ss_dssp             HHHTTTTCEEEEEECCSBSSHH--------H---HHHCTT------CCGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEES
T ss_pred             HHHhcCCcEEEEEecCcccCch--------h---hhhCCc------cchhccCCHHHHHHHHHHHcCccccCCCCCEEEe
Confidence            87765  677788888874321        0   111111      112346789999999999886542  345 5556


Q ss_pred             -ecCccCH
Q 030406          153 -AESVLHR  159 (178)
Q Consensus       153 -~~~~~s~  159 (178)
                       +|...++
T Consensus       243 dgG~~~~~  250 (252)
T 3f1l_A          243 QPGRKPGI  250 (252)
T ss_dssp             SCC-----
T ss_pred             CCCcCCCC
Confidence             4444443

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=98.63  E-value=7.5e-07  Score=63.63  Aligned_cols=113  Identities=20%  Similarity=0.143  Sum_probs=76.1

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++..    .+ .++|++||.++..+                     ......|+.+|...+.+.+.+
T Consensus       112 ~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~---------------------~~~~~~Y~asK~a~~~~~~~l  169 (247)
T 2jah_A          112 IDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVN---------------------VRNAAVYQATKFGVNAFSETL  169 (247)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCC---------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCC---------------------CCCCcHHHHHHHHHHHHHHHH
Confidence            57899999999988753    35 79999999544321                     123467999999999988776


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   .|+++.+++||.+..+-..........   ...... +    ....++..+|+|++++.++..+
T Consensus       170 a~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~---~~~~~~-~----~~~~~~~pedvA~~v~~l~s~~  231 (247)
T 2jah_A          170 RQEVTERGVRVVVIEPGTTDTELRGHITHTATK---EMYEQR-I----SQIRKLQAQDIAEAVRYAVTAP  231 (247)
T ss_dssp             HHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHH---HHHHHH-T----TTSCCBCHHHHHHHHHHHHHSC
T ss_pred             HHHhcccCcEEEEEECCCCCCcchhcccchhhH---HHHHhc-c----cccCCCCHHHHHHHHHHHhCCC
Confidence            554   489999999999976532211111111   111110 1    1122689999999999998764

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=98.62  E-value=1.8e-07  Score=67.26  Aligned_cols=123  Identities=21%  Similarity=0.181  Sum_probs=78.9

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..+||++||.++..+                     ......|+.+|...+.+.+.+
T Consensus       115 ~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asK~a~~~~~~~l  173 (253)
T 2nm0_A          115 VETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLG---------------------SAGQANYAASKAGLVGFARSL  173 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCC---------------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC---------------------CCCcHHHHHHHHHHHHHHHHH
Confidence            57899999999987754    35679999999543321                     123467999999999998887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+   .|+++.+++||.+..+..... ..   ..........     ....+++++|+|++++.++..+.  ..| .+.
T Consensus       174 a~e~~~~gi~vn~v~PG~v~T~~~~~~-~~---~~~~~~~~~~-----p~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~  244 (253)
T 2nm0_A          174 ARELGSRNITFNVVAPGFVDTDMTKVL-TD---EQRANIVSQV-----PLGRYARPEEIAATVRFLASDDASYITGAVIP  244 (253)
T ss_dssp             HHHHCSSSEEEEEEEECSBCC-------------CHHHHHTTC-----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhhhcCeEEEEEEeCcCcCcchhhc-CH---HHHHHHHhcC-----CCCCCcCHHHHHHHHHHHhCccccCCcCcEEE
Confidence            665   478999999998865432110 00   0001111111     12347899999999999887542  345 445


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       245 vdG  247 (253)
T 2nm0_A          245 VDG  247 (253)
T ss_dssp             EST
T ss_pred             ECC
Confidence            544

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=98.60  E-value=3e-07  Score=66.80  Aligned_cols=130  Identities=15%  Similarity=0.114  Sum_probs=83.1

Q ss_pred             chhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++..    .+ -.+||++||.++..+                     ......|+.+|...+.+.+.
T Consensus       129 ~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~~~~~  187 (277)
T 3tsc_A          129 MDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM---------------------QPFMIHYTASKHAVTGLARA  187 (277)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC---------------------CSSCHHHHHHHHHHHHHHHH
T ss_pred             HHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC---------------------CCCchhhHHHHHHHHHHHHH
Confidence            67899999999988653    23 458999999644321                     12346799999999999988


Q ss_pred             HHHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCcc---cc-CCCCcccccHHHHHHHHHHhhcCCC--CC
Q 030406           77 EAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK---TY-ANSVQAYVHVRDVALAHILVYETPS--AS  147 (178)
Q Consensus        77 ~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~i~v~D~a~~~~~~~~~~~--~~  147 (178)
                      ++.+.   |+++..++||.+..+.....   ..............   .. .....-+.+++|+|++++.++..+.  ..
T Consensus       188 la~e~~~~gi~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~it  264 (277)
T 3tsc_A          188 FAAELGKHSIRVNSVHPGPVNTPMGSGD---MVTAVGQAMETNPQLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVT  264 (277)
T ss_dssp             HHHHHGGGTEEEEEEEESSBSSGGGSHH---HHHHHHHHHHTCGGGTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHhCccCeEEEEEEeCCCcCCcccch---hhhhhhhcccccHHHHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCc
Confidence            77664   79999999999976542210   11111111111111   01 1111248899999999999986543  34


Q ss_pred             C-cEEEecC
Q 030406          148 G-RYLCAES  155 (178)
Q Consensus       148 ~-~~~~~~~  155 (178)
                      | .+++.+.
T Consensus       265 G~~i~vdGG  273 (277)
T 3tsc_A          265 AAQIPVDQG  273 (277)
T ss_dssp             SCEEEESTT
T ss_pred             CCEEeeCCC
Confidence            5 5566543

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.59  E-value=2e-07  Score=67.37  Aligned_cols=123  Identities=20%  Similarity=0.166  Sum_probs=82.1

Q ss_pred             chhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~--~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...-  ..+||++||.++ ++.                     .....|+.+|...+.+.+.++.
T Consensus       108 ~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~-~~~---------------------~~~~~Y~asK~a~~~~~~~la~  165 (263)
T 2a4k_A          108 LRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG-LGA---------------------FGLAHYAAGKLGVVGLARTLAL  165 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT-CCH---------------------HHHHHHHHCSSHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHhcCCEEEEEecchh-cCC---------------------CCcHHHHHHHHHHHHHHHHHHH
Confidence            5789999999999987632  459999999533 210                     1346799999999988887665


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEEEe
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLCA  153 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~  153 (178)
                      +   .|+++.+++||.+.++..... ...  .........      ....+++++|+|++++.++..+.  ..| .+.+.
T Consensus       166 e~~~~gi~v~~v~PG~v~t~~~~~~-~~~--~~~~~~~~~------p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vd  236 (263)
T 2a4k_A          166 ELARKGVRVNVLLPGLIQTPMTAGL-PPW--AWEQEVGAS------PLGRAGRPEEVAQAALFLLSEESAYITGQALYVD  236 (263)
T ss_dssp             HHTTTTCEEEEEEECSBCCGGGTTS-CHH--HHHHHHHTS------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HhhhhCcEEEEEEeCcCcCchhhhc-CHH--HHHHHHhcC------CCCCCcCHHHHHHHHHHHhCccccCCcCCEEEEC
Confidence            4   489999999999987643221 111  111111111      11247899999999999887542  345 44564


Q ss_pred             cC
Q 030406          154 ES  155 (178)
Q Consensus       154 ~~  155 (178)
                      +.
T Consensus       237 gG  238 (263)
T 2a4k_A          237 GG  238 (263)
T ss_dssp             TT
T ss_pred             CC
Confidence            43

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=98.59  E-value=9.1e-07  Score=63.92  Aligned_cols=130  Identities=14%  Similarity=0.142  Sum_probs=80.8

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..++|++||..+..+                     ..+...|+.+|...+.+.+.+
T Consensus       113 ~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~l  171 (267)
T 3t4x_A          113 FEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMP---------------------SQEMAHYSATKTMQLSLSRSL  171 (267)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccC---------------------CCcchHHHHHHHHHHHHHHHH
Confidence            5789999777766654    456679999999644321                     124578999999999999988


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCC-------CChhhHH-HHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQS-------TVNASII-HILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--  144 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--  144 (178)
                      +.+.   |+.+..++||.+..+....       ....... ..........+  ......+.+++|+|++++.++...  
T Consensus       172 a~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~r~~~pedvA~~v~fL~s~~~~  249 (267)
T 3t4x_A          172 AELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRP--TSIIQRLIRPEEIAHLVTFLSSPLSS  249 (267)
T ss_dssp             HHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCT--TCSSCSCBCTHHHHHHHHHHHSGGGT
T ss_pred             HHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCC--cccccCccCHHHHHHHHHHHcCcccc
Confidence            7765   5888889999886542100       0000000 00011111000  012356889999999999988743  


Q ss_pred             CCCC-cEEEec
Q 030406          145 SASG-RYLCAE  154 (178)
Q Consensus       145 ~~~~-~~~~~~  154 (178)
                      ...| .+++.+
T Consensus       250 ~itG~~i~vdG  260 (267)
T 3t4x_A          250 AINGSALRIDG  260 (267)
T ss_dssp             TCCSCEEEEST
T ss_pred             CccCCeEEECC
Confidence            2345 556644

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=98.59  E-value=2.4e-07  Score=66.47  Aligned_cols=114  Identities=14%  Similarity=-0.008  Sum_probs=68.8

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++.    +.+..++|++||.++..+.                     .....|+.+|...+.+.+.+
T Consensus       111 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~l  169 (252)
T 3h7a_A          111 WEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGG---------------------SGFAAFASAKFGLRAVAQSM  169 (252)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCC---------------------CCCccHHHHHHHHHHHHHHH
Confidence            5789999998888774    3455799999996544321                     24567999999999998887


Q ss_pred             HHhc---CCcE-EEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC
Q 030406           78 AVAR---GVDL-VVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA  146 (178)
Q Consensus        78 ~~~~---~~~~-~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  146 (178)
                      +.+.   |+.+ .++.||.+..+.....    ..........     ..... ++.++|+|++++.++..+..
T Consensus       170 a~e~~~~gi~v~n~v~PG~v~T~~~~~~----~~~~~~~~~~-----~~~~~-~~~pedvA~~~~~l~s~~~~  232 (252)
T 3h7a_A          170 ARELMPKNIHVAHLIIDSGVDTAWVRER----REQMFGKDAL-----ANPDL-LMPPAAVAGAYWQLYQQPKS  232 (252)
T ss_dssp             HHHHGGGTEEEEEEEEC-------------------------------------CCHHHHHHHHHHHHHCCGG
T ss_pred             HHHhhhcCCEEEEEecCCccCChhhhcc----chhhhhhhhh-----cCCcc-CCCHHHHHHHHHHHHhCchh
Confidence            6653   7888 7899998865432111    0000000000     01123 89999999999999987644

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=98.59  E-value=5e-07  Score=65.60  Aligned_cols=115  Identities=15%  Similarity=0.087  Sum_probs=72.2

Q ss_pred             chhHHHHHHHHHHHHHh----CC--CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW   75 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~--~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~   75 (178)
                      +++|+.|+.++++++..    .+  ..+||++||.++..+                     ..+...|+.+|...+.+.+
T Consensus       131 ~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~  189 (272)
T 4dyv_A          131 VDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSP---------------------RPYSAPYTATKHAITGLTK  189 (272)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSC---------------------CTTCHHHHHHHHHHHHHHH
T ss_pred             HHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCC---------------------CCCchHHHHHHHHHHHHHH
Confidence            57899998888887753    32  358999999644321                     1245779999999999988


Q ss_pred             HHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCC
Q 030406           76 EEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSAS  147 (178)
Q Consensus        76 ~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~  147 (178)
                      .++.+   .|+.+..++||.+..+-....    .......      ........+++++|+|++++.++..+...
T Consensus       190 ~la~e~~~~gI~vn~v~PG~v~T~~~~~~----~~~~~~~------~~~~~~~~~~~pedvA~~v~fL~s~~~~~  254 (272)
T 4dyv_A          190 STSLDGRVHDIACGQIDIGNADTPMAQKM----KAGVPQA------DLSIKVEPVMDVAHVASAVVYMASLPLDA  254 (272)
T ss_dssp             HHHHHHGGGTEEEEEEEEEECC----------------------------------CHHHHHHHHHHHHHSCTTS
T ss_pred             HHHHHhCccCEEEEEEEECcccChhhhhh----cccchhh------hhcccccCCCCHHHHHHHHHHHhCCCCcC
Confidence            87665   479999999999865431110    0000000      00112234789999999999999987554

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=98.58  E-value=3.6e-07  Score=66.05  Aligned_cols=114  Identities=19%  Similarity=0.199  Sum_probs=73.3

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++..    .+..+||++||.++..+                     ......|+.+|...+.+.+.+
T Consensus       109 ~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~---------------------~~~~~~Y~asKaal~~l~~~l  167 (264)
T 3tfo_A          109 IDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSV---------------------VPTAAVYCATKFAVRAISDGL  167 (264)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC---------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHccc---------------------CCCChhHHHHHHHHHHHHHHH
Confidence            57899999988887753    45679999999654432                     124467999999999999988


Q ss_pred             HHhc-CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC
Q 030406           78 AVAR-GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA  146 (178)
Q Consensus        78 ~~~~-~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  146 (178)
                      +.+. |+++..++||.+..+-.........   ..       ........++..+|+|++++.++..+..
T Consensus       168 a~e~~gIrvn~v~PG~v~T~~~~~~~~~~~---~~-------~~~~~~~~~~~pedvA~~v~~l~s~~~~  227 (264)
T 3tfo_A          168 RQESTNIRVTCVNPGVVESELAGTITHEET---MA-------AMDTYRAIALQPADIARAVRQVIEAPQS  227 (264)
T ss_dssp             HHHCSSEEEEEEEECCC---------------------------------CCCHHHHHHHHHHHHHSCTT
T ss_pred             HHhCCCCEEEEEecCCCcCcccccccchhH---HH-------HHHhhhccCCCHHHHHHHHHHHhcCCcc
Confidence            7765 7889999999886543211000000   00       0001112247899999999999988755

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=98.57  E-value=1.1e-07  Score=69.37  Aligned_cols=106  Identities=15%  Similarity=0.006  Sum_probs=75.3

Q ss_pred             chhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.|+.++++++...   +..+||++||.++..+                     ..+.+.|+.+|...+.+.+.++
T Consensus       134 ~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asK~a~~~~~~~l~  192 (286)
T 1xu9_A          134 MEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA---------------------YPMVAAYSASKFALDGFFSSIR  192 (286)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC---------------------CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccC---------------------CCCccHHHHHHHHHHHHHHHHH
Confidence            578999999999888642   2469999999543321                     1245689999999999988776


Q ss_pred             Hhc-----CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC
Q 030406           79 VAR-----GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        79 ~~~-----~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                      .+.     ++.+++++||.+..+.        .   .....+      .....+++++|+|+.++.+++.+.
T Consensus       193 ~e~~~~~~~i~v~~v~Pg~v~t~~--------~---~~~~~~------~~~~~~~~~~~vA~~i~~~~~~~~  247 (286)
T 1xu9_A          193 KEYSVSRVNVSITLCVLGLIDTET--------A---MKAVSG------IVHMQAAPKEECALEIIKGGALRQ  247 (286)
T ss_dssp             HHHHHHTCCCEEEEEEECCBCCHH--------H---HHHSCG------GGGGGCBCHHHHHHHHHHHHHTTC
T ss_pred             HHHhhcCCCeEEEEeecCccCChh--------H---HHhccc------cccCCCCCHHHHHHHHHHHHhcCC
Confidence            554     8999999999885431        0   011111      122457899999999999998753

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=98.57  E-value=3e-07  Score=64.96  Aligned_cols=106  Identities=16%  Similarity=0.134  Sum_probs=72.0

Q ss_pred             chhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.++++++...   .-.++|++||..+..+                     ......|+.+|...+.+.+.++
T Consensus       100 ~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~~~~~la  158 (230)
T 3guy_A          100 IENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQP---------------------KAQESTYCAVKWAVKGLIESVR  158 (230)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCC---------------------CCCCchhHHHHHHHHHHHHHHH
Confidence            578999999999988653   1238999999544321                     1245689999999999999887


Q ss_pred             Hhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC
Q 030406           79 VAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        79 ~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                      .+.   |+.+..++||.+..+-....            ...     .....+++++|+|++++.++..+.
T Consensus       159 ~e~~~~gi~v~~v~PG~v~t~~~~~~------------~~~-----~~~~~~~~~~dvA~~i~~l~~~~~  211 (230)
T 3guy_A          159 LELKGKPMKIIAVYPGGMATEFWETS------------GKS-----LDTSSFMSAEDAALMIHGALANIG  211 (230)
T ss_dssp             HHTTTSSCEEEEEEECCC---------------------------------CCCHHHHHHHHHHHCCEET
T ss_pred             HHHHhcCeEEEEEECCcccChHHHhc------------CCC-----CCcccCCCHHHHHHHHHHHHhCcC
Confidence            765   79999999998865421110            000     123467899999999999987653

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=98.57  E-value=1.7e-06  Score=63.59  Aligned_cols=126  Identities=17%  Similarity=0.158  Sum_probs=82.5

Q ss_pred             chhHHHHHHHHHHHHHh----C-CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----A-KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.|+.++++++..    . +..+||++||.++..+                     ......|+.+|...+.+.+.
T Consensus       146 ~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~  204 (299)
T 3t7c_A          146 IDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG---------------------AENIGNYIASKHGLHGLMRT  204 (299)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC---------------------CCCcchHHHHHHHHHHHHHH
Confidence            67899999999998753    2 3568999999644322                     12446799999999999888


Q ss_pred             HHHhc---CCcEEEecCCceeCCCCCCCCh----------hhHHHHHH--HHhCCccccCCCCcccccHHHHHHHHHHhh
Q 030406           77 EAVAR---GVDLVVVNPVLVLGPLLQSTVN----------ASIIHILK--YLNGSAKTYANSVQAYVHVRDVALAHILVY  141 (178)
Q Consensus        77 ~~~~~---~~~~~i~R~~~v~G~~~~~~~~----------~~~~~~~~--~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  141 (178)
                      ++.+.   |+.+..++||.+..+.......          ........  ....      .....+..++|+|++++.++
T Consensus       205 la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~p~r~~~pedvA~~v~fL~  278 (299)
T 3t7c_A          205 MALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMH------VLPIPYVEPADISNAILFLV  278 (299)
T ss_dssp             HHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHS------SSSCSCBCHHHHHHHHHHHH
T ss_pred             HHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhc------ccCcCCCCHHHHHHHHHHHh
Confidence            77664   7999999999998764322100          00000000  0001      11145788999999999998


Q ss_pred             cCCC--CCC-cEEEec
Q 030406          142 ETPS--ASG-RYLCAE  154 (178)
Q Consensus       142 ~~~~--~~~-~~~~~~  154 (178)
                      ....  ..| .+++.+
T Consensus       279 s~~a~~itG~~i~vdG  294 (299)
T 3t7c_A          279 SDDARYITGVSLPVDG  294 (299)
T ss_dssp             SGGGTTCCSCEEEEST
T ss_pred             CcccccCcCCEEeeCC
Confidence            6542  345 556644

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.57  E-value=2.2e-07  Score=65.94  Aligned_cols=102  Identities=11%  Similarity=0.036  Sum_probs=73.1

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...  +..++|++||..+..+                     ..+...|+.+|...+.+.+.++.
T Consensus       101 ~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~la~  159 (236)
T 1ooe_A          101 IKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP---------------------TPSMIGYGMAKAAVHHLTSSLAA  159 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC---------------------CTTBHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC---------------------CCCcHHHHHHHHHHHHHHHHHHH
Confidence            578999999999998763  2258999999544321                     12456799999999999998877


Q ss_pred             hc-----CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhh
Q 030406           80 AR-----GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVY  141 (178)
Q Consensus        80 ~~-----~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  141 (178)
                      +.     |+++.+++||.+.++.        .    ......     .....++..+|+|++++.++
T Consensus       160 e~~~~~~gi~v~~v~Pg~v~t~~--------~----~~~~~~-----~~~~~~~~~~dvA~~i~~~l  209 (236)
T 1ooe_A          160 KDSGLPDNSAVLTIMPVTLDTPM--------N----RKWMPN-----ADHSSWTPLSFISEHLLKWT  209 (236)
T ss_dssp             TTSSCCTTCEEEEEEESCBCCHH--------H----HHHSTT-----CCGGGCBCHHHHHHHHHHHH
T ss_pred             HhcccCCCeEEEEEecCcccCcc--------h----hhcCCC-----ccccccCCHHHHHHHHHHHH
Confidence            65     4999999999986542        1    111011     11234678899999998666

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=98.56  E-value=1.3e-07  Score=68.85  Aligned_cols=127  Identities=17%  Similarity=0.073  Sum_probs=80.4

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++.    +.+..+||++||..+..+                     ..+...|+.+|...+.+.+.+
T Consensus       137 ~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~l  195 (275)
T 4imr_A          137 LAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRP---------------------KSVVTAYAATKAAQHNLIQSQ  195 (275)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---------------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC---------------------CCCchhhHHHHHHHHHHHHHH
Confidence            5789999999998884    345679999999544321                     124567999999999998887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYL  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~  151 (178)
                      +.+.   |+.+..++||.+..+....................     ....-+..++|+|++++.++....  ..| .++
T Consensus       196 a~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-----~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~  270 (275)
T 4imr_A          196 ARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTL-----NWMGRAGRPEEMVGAALFLASEACSFMTGETIF  270 (275)
T ss_dssp             HHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHH-----STTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhc-----CccCCCcCHHHHHHHHHHHcCcccCCCCCCEEE
Confidence            7664   79999999999965421100000000111111110     011235679999999999886532  345 445


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       271 vdG  273 (275)
T 4imr_A          271 LTG  273 (275)
T ss_dssp             ESS
T ss_pred             eCC
Confidence            544

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=98.56  E-value=5.7e-07  Score=64.44  Aligned_cols=107  Identities=14%  Similarity=0.024  Sum_probs=74.2

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..++|++||.++.++.                     .+...|+.+|...+.+.+.+
T Consensus       114 ~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~l  172 (250)
T 3nyw_A          114 MEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF---------------------ADGGIYGSTKFALLGLAESL  172 (250)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC----------------------------CCTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCC---------------------CCCcchHHHHHHHHHHHHHH
Confidence            5789999999998884    3456799999996554321                     23568999999999998887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA  146 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  146 (178)
                      +.+.   |+++..++||.+..+-            .......     .....+++++|++++++.++..+..
T Consensus       173 a~e~~~~gi~vn~v~PG~v~T~~------------~~~~~~~-----~~~~~~~~p~dva~~v~~l~s~~~~  227 (250)
T 3nyw_A          173 YRELAPLGIRVTTLCPGWVNTDM------------AKKAGTP-----FKDEEMIQPDDLLNTIRCLLNLSEN  227 (250)
T ss_dssp             HHHHGGGTEEEEEEEESSBCSHH------------HHHTTCC-----SCGGGSBCHHHHHHHHHHHHTSCTT
T ss_pred             HHHhhhcCcEEEEEecCcccCch------------hhhcCCC-----cccccCCCHHHHHHHHHHHHcCCCc
Confidence            6654   7999999999885421            1111111     1223478999999999999987643

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=98.56  E-value=1e-06  Score=64.26  Aligned_cols=128  Identities=14%  Similarity=0.135  Sum_probs=82.7

Q ss_pred             chhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++...    + ..+||++||..+..+                     ......|+.+|...+.+.+.
T Consensus       133 ~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~~~~~  191 (286)
T 3uve_A          133 IDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKA---------------------YPHTGHYVAAKHGVVGLMRA  191 (286)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccC---------------------CCCccHHHHHHHHHHHHHHH
Confidence            678999999999987642    2 458999999644321                     12446799999999999888


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCCh----------hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVN----------ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      ++.+   .|+.+..++||.+..+.......          ............    .......+.+++|+|++++.++..
T Consensus       192 la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~p~r~~~p~dvA~~v~fL~s~  267 (286)
T 3uve_A          192 FGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQM----FHTLPIPWVEPIDISNAVLFFASD  267 (286)
T ss_dssp             HHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHT----TCSSSCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHh----hhccCCCcCCHHHHHHHHHHHcCc
Confidence            7666   57999999999997764322100          000000010000    011115678999999999998865


Q ss_pred             C--CCCC-cEEEec
Q 030406          144 P--SASG-RYLCAE  154 (178)
Q Consensus       144 ~--~~~~-~~~~~~  154 (178)
                      .  ...| .+++.+
T Consensus       268 ~a~~itG~~i~vdG  281 (286)
T 3uve_A          268 EARYITGVTLPIDA  281 (286)
T ss_dssp             GGTTCCSCEEEEST
T ss_pred             cccCCcCCEEeECC
Confidence            3  2345 556644

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=98.56  E-value=6.7e-07  Score=64.89  Aligned_cols=113  Identities=15%  Similarity=0.123  Sum_probs=71.5

Q ss_pred             chhHHHHHHHHHHHHH----hCCCC-EEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVR-RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~-~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.|+.++++++.    +.+.. +||++||..+..+                     ......|+.+|...+.+.+.
T Consensus       126 ~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~  184 (272)
T 2nwq_A          126 VDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWP---------------------YPGSHVYGGTKAFVEQFSLN  184 (272)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccC---------------------CCCCchHHHHHHHHHHHHHH
Confidence            5789999877776664    44556 9999999544321                     12346799999999999998


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      ++.+   .|+++.+++||.+.++-...............       .  ....++..+|+|++++.++..+
T Consensus       185 la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~-------~--~~~~~~~pedvA~~v~~l~s~~  246 (272)
T 2nwq_A          185 LRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKT-------Y--AGAHPIQPEDIAETIFWIMNQP  246 (272)
T ss_dssp             HHTTCTTSCCEEEEEEECSBC-----------------------------CCCCBCHHHHHHHHHHHHTSC
T ss_pred             HHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHh-------h--ccCCCCCHHHHHHHHHHHhCCC
Confidence            7755   47999999999997653211000000000000       0  0112478999999999999764

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=98.56  E-value=1e-06  Score=65.68  Aligned_cols=122  Identities=12%  Similarity=-0.009  Sum_probs=81.7

Q ss_pred             chhHHHHHHHHHHHHHh----CC------CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE   71 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~------~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E   71 (178)
                      +++|+.++.++++++..    .+      ..+||++||..+..+                     ..+...|+.+|...+
T Consensus       184 ~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~---------------------~~~~~~Y~asKaal~  242 (328)
T 2qhx_A          184 FGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP---------------------LLGYTIYTMAKGALE  242 (328)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSC---------------------CTTCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccC---------------------CCCcHHHHHHHHHHH
Confidence            57899999999888763    34      579999999543321                     124467999999999


Q ss_pred             HHHHHHHHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CC
Q 030406           72 KAAWEEAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SA  146 (178)
Q Consensus        72 ~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~  146 (178)
                      .+.+.++.+.   |+.+.+++||.+..+. .. ..    ..........+ .+   .-+..++|+|++++.++...  ..
T Consensus       243 ~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~-~~----~~~~~~~~~~p-~~---~r~~~pedvA~~v~~l~s~~~~~i  312 (328)
T 2qhx_A          243 GLTRSAALELAPLQIRVNGVGPGLSVLVD-DM-PP----AVWEGHRSKVP-LY---QRDSSAAEVSDVVIFLCSSKAKYI  312 (328)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEESSBSCCC-CS-CH----HHHHHHHTTCT-TT---TSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHhhcCcEEEEEecCcccCCc-cc-cH----HHHHHHHhhCC-CC---CCCCCHHHHHHHHHHHhCccccCc
Confidence            9988876654   8999999999998765 21 11    11111112111 11   14678999999999998642  33


Q ss_pred             CC-cEEEec
Q 030406          147 SG-RYLCAE  154 (178)
Q Consensus       147 ~~-~~~~~~  154 (178)
                      .| .+.+.+
T Consensus       313 tG~~i~vdG  321 (328)
T 2qhx_A          313 TGTCVKVDG  321 (328)
T ss_dssp             CSCEEEEST
T ss_pred             cCcEEEECC
Confidence            45 445644

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=98.54  E-value=1.4e-06  Score=63.90  Aligned_cols=125  Identities=14%  Similarity=0.052  Sum_probs=81.2

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...  +..+||++||.++..+                     ......|+.+|...+.+.+.++.
T Consensus       141 ~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~la~  199 (293)
T 3grk_A          141 MLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKV---------------------MPNYNVMGVAKAALEASVKYLAV  199 (293)
T ss_dssp             HHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSB---------------------CTTTTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccC---------------------CCchHHHHHHHHHHHHHHHHHHH
Confidence            578999999999999763  2358999999644332                     12446799999999999888766


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEEEe
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYLCA  153 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~  153 (178)
                      +   .|+++..++||.+..+......  ............     .....+..++|+|++++.++...  ...| .+++.
T Consensus       200 e~~~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~-----~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vd  272 (293)
T 3grk_A          200 DLGPQNIRVNAISAGPIKTLAASGIG--DFRYILKWNEYN-----APLRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHAD  272 (293)
T ss_dssp             HHGGGTEEEEEEEECCCCC------C--CHHHHHHHHHHH-----STTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHhHhCCEEEEEecCCCcchhhhccc--chHHHHHHHHhc-----CCCCCCCCHHHHHHHHHHHcCccccCCcceEEEEC
Confidence            5   4799999999999875422211  111111111111     11234677999999999988753  2345 55664


Q ss_pred             c
Q 030406          154 E  154 (178)
Q Consensus       154 ~  154 (178)
                      +
T Consensus       273 G  273 (293)
T 3grk_A          273 S  273 (293)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=98.54  E-value=6.7e-07  Score=64.70  Aligned_cols=125  Identities=14%  Similarity=0.084  Sum_probs=80.6

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.|+.++++++...  +..++|++||..+..+.                     .....|+.+|...+.+.+.++.
T Consensus       133 ~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~l~~~la~  191 (267)
T 3u5t_A          133 IAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLH---------------------PSYGIYAAAKAGVEAMTHVLSK  191 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCC---------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCC---------------------CCchHHHHHHHHHHHHHHHHHH
Confidence            569999999999988753  23589999995443321                     2346799999999999998887


Q ss_pred             hc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cEEEe
Q 030406           80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RYLCA  153 (178)
Q Consensus        80 ~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~  153 (178)
                      +.   |+++..++||.+..+-......   ..........     .....+..++|+|++++.++....  ..| .+.+.
T Consensus       192 e~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~-----~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vd  263 (267)
T 3u5t_A          192 ELRGRDITVNAVAPGPTATDLFLEGKS---DEVRDRFAKL-----APLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRAN  263 (267)
T ss_dssp             HTTTSCCEEEEEEECCBC--------------CHHHHHTS-----STTCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEES
T ss_pred             HhhhhCCEEEEEEECCCcCccccccCC---HHHHHHHHhc-----CCCCCCcCHHHHHHHHHHHhCccccCccCCEEEeC
Confidence            75   7999999999986543211100   0011111111     123457789999999999987543  245 44565


Q ss_pred             cC
Q 030406          154 ES  155 (178)
Q Consensus       154 ~~  155 (178)
                      +.
T Consensus       264 GG  265 (267)
T 3u5t_A          264 GG  265 (267)
T ss_dssp             SS
T ss_pred             CC
Confidence            43

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=98.53  E-value=5.8e-07  Score=64.89  Aligned_cols=129  Identities=11%  Similarity=-0.036  Sum_probs=81.7

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..+||++||..+..+                     ......|+.+|...+.+.+.+
T Consensus       115 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~l  173 (265)
T 3lf2_A          115 LQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQP---------------------EPHMVATSAARAGVKNLVRSM  173 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSC---------------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCC---------------------CCCchhhHHHHHHHHHHHHHH
Confidence            57899999999998853    34568999999644321                     124578999999999998877


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCCh------hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CC
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVN------ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SA  146 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~  146 (178)
                      +.+.   |+++..++||.+..+.......      .....+........   ......+..++|+|++++.++...  ..
T Consensus       174 a~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~p~~r~~~pedvA~~v~fL~s~~~~~i  250 (265)
T 3lf2_A          174 AFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNK---QIPLGRLGKPIEAARAILFLASPLSAYT  250 (265)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHT---TCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhcc---CCCcCCCcCHHHHHHHHHHHhCchhcCc
Confidence            6654   7999999999997642110000      00011111111100   011234678999999999988743  23


Q ss_pred             CC-cEEEec
Q 030406          147 SG-RYLCAE  154 (178)
Q Consensus       147 ~~-~~~~~~  154 (178)
                      .| .+++.+
T Consensus       251 tG~~i~vdG  259 (265)
T 3lf2_A          251 TGSHIDVSG  259 (265)
T ss_dssp             CSEEEEESS
T ss_pred             CCCEEEECC
Confidence            45 445644

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=98.53  E-value=6.6e-07  Score=63.51  Aligned_cols=105  Identities=15%  Similarity=0.077  Sum_probs=73.5

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++..    .+ .++|++||..+.++.                     .....|+.+|...+.+.+.+
T Consensus       105 ~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~---------------------~~~~~Y~asKaa~~~~~~~l  162 (235)
T 3l6e_A          105 MESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGK---------------------ANESLYCASKWGMRGFLESL  162 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSC---------------------SSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCC---------------------CCCcHHHHHHHHHHHHHHHH
Confidence            57899999999888853    23 389999996544321                     23467999999999999988


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA  146 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  146 (178)
                      +.+   .|+.+..++||.+-.+-....        ..          .....++.++|+|++++.++..+..
T Consensus       163 a~e~~~~gi~v~~v~PG~v~T~~~~~~--------~~----------~~~~~~~~pedvA~~v~~l~~~~~~  216 (235)
T 3l6e_A          163 RAELKDSPLRLVNLYPSGIRSEFWDNT--------DH----------VDPSGFMTPEDAAAYMLDALEARSS  216 (235)
T ss_dssp             HHHTTTSSEEEEEEEEEEECCCC-----------------------------CBCHHHHHHHHHHHTCCCSS
T ss_pred             HHHhhccCCEEEEEeCCCccCcchhcc--------CC----------CCCcCCCCHHHHHHHHHHHHhCCCC
Confidence            765   378999999998854421110        00          0112578999999999999987643

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=98.51  E-value=4.8e-07  Score=65.38  Aligned_cols=125  Identities=15%  Similarity=0.091  Sum_probs=81.3

Q ss_pred             chhHHHHHHHHHHHHHhC----C-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----K-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++...    + ..++|++||..+..+                     ......|+.+|...+.+.+.
T Consensus       126 ~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asK~a~~~l~~~  184 (266)
T 4egf_A          126 IAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP---------------------LPDHYAYCTSKAGLVMATKV  184 (266)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC---------------------CCCChHHHHHHHHHHHHHHH
Confidence            578999999999888642    2 358999999544321                     12456799999999999888


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cE
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY  150 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~  150 (178)
                      ++.+   .|+++..++||.+..+...... .......... ..     .....+..++|+|++++.++...  ...| .+
T Consensus       185 la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~-~~-----~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i  257 (266)
T 4egf_A          185 LARELGPHGIRANSVCPTVVLTEMGQRVW-GDEAKSAPMI-AR-----IPLGRFAVPHEVSDAVVWLASDAASMINGVDI  257 (266)
T ss_dssp             HHHHHGGGTEEEEEEEESCBCSHHHHHHT-CSHHHHHHHH-TT-----CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHhhhCeEEEEEEeCCCcCchhhhhc-cChHHHHHHH-hc-----CCCCCCcCHHHHHHHHHHHhCchhcCccCcEE
Confidence            7665   4899999999999765311000 0000111111 11     12234678999999999988753  2345 55


Q ss_pred             EEec
Q 030406          151 LCAE  154 (178)
Q Consensus       151 ~~~~  154 (178)
                      ++.+
T Consensus       258 ~vdG  261 (266)
T 4egf_A          258 PVDG  261 (266)
T ss_dssp             EEST
T ss_pred             EECC
Confidence            6644

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=98.51  E-value=1.3e-06  Score=64.02  Aligned_cols=126  Identities=10%  Similarity=0.047  Sum_probs=82.4

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccC-chHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK-NWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.++++++...  .-.++|++||.++..+.                     ... ..|+.+|...+.+.+.++
T Consensus       149 ~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~---------------------~~~~~~Y~asKaa~~~~~~~la  207 (297)
T 1d7o_A          149 ISASSYSFVSLLSHFLPIMNPGGASISLTYIASERII---------------------PGYGGGMSSAKAALESDTRVLA  207 (297)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC---------------------TTCTTTHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhHHHHHHHHHHHHhccCceEEEEeccccccCC---------------------CCcchHHHHHHHHHHHHHHHHH
Confidence            578999999999999864  12589999996443321                     112 469999999999988776


Q ss_pred             Hh----cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEE
Q 030406           79 VA----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL  151 (178)
Q Consensus        79 ~~----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~  151 (178)
                      .+    .|+.+..++||.+.++..... . ....+........     ....+..++|+|++++.++...  ...| .++
T Consensus       208 ~e~~~~~gi~vn~v~PG~v~T~~~~~~-~-~~~~~~~~~~~~~-----p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~  280 (297)
T 1d7o_A          208 FEAGRKQNIRVNTISAGPLGSRAAKAI-G-FIDTMIEYSYNNA-----PIQKTLTADEVGNAAAFLVSPLASAITGATIY  280 (297)
T ss_dssp             HHHHHHHCCEEEEEEECCCBCCCSSCC-S-HHHHHHHHHHHHS-----SSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHhCcccCcEEEEEeccccccchhhhc-c-ccHHHHHHhhccC-----CCCCCCCHHHHHHHHHHHhCccccCCCCCEEE
Confidence            54    589999999999987653321 0 1111111111111     1123568999999999888643  2345 455


Q ss_pred             EecC
Q 030406          152 CAES  155 (178)
Q Consensus       152 ~~~~  155 (178)
                      +.+.
T Consensus       281 vdgG  284 (297)
T 1d7o_A          281 VDNG  284 (297)
T ss_dssp             ESTT
T ss_pred             ECCC
Confidence            6543

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=98.50  E-value=2e-06  Score=61.31  Aligned_cols=126  Identities=13%  Similarity=0.081  Sum_probs=80.1

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..+||++||.++..+.                     .....|+.+|...+.+.+.+
T Consensus       103 ~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~l  161 (244)
T 1zmo_A          103 FEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL---------------------AYNPLYGPARAATVALVESA  161 (244)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC---------------------TTCTTHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCC---------------------CCchHHHHHHHHHHHHHHHH
Confidence            5789999999988875    4556799999995443211                     23467999999999998877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCC--CCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCCcE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQ--STVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASGRY  150 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~  150 (178)
                      +.+   .|+.+..++||.+-.+-..  ...... ...........     ....+...+|+|++++.++..+.  ..|.+
T Consensus       162 a~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~-----p~~r~~~pe~vA~~v~~l~s~~~~~~tG~~  235 (244)
T 1zmo_A          162 AKTLSRDGILLYAIGPNFFNNPTYFPTSDWENN-PELRERVDRDV-----PLGRLGRPDEMGALITFLASRRAAPIVGQF  235 (244)
T ss_dssp             HHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHC-HHHHHHHHHHC-----TTCSCBCHHHHHHHHHHHHTTTTGGGTTCE
T ss_pred             HHHHhhcCcEEEEEeeCCCcCCcccccccccch-HHHHHHHhcCC-----CCCCCcCHHHHHHHHHHHcCccccCccCCE
Confidence            655   4899999999988654310  000000 01111111000     11236789999999999987643  23544


Q ss_pred             -EEec
Q 030406          151 -LCAE  154 (178)
Q Consensus       151 -~~~~  154 (178)
                       .+.+
T Consensus       236 i~vdg  240 (244)
T 1zmo_A          236 FAFTG  240 (244)
T ss_dssp             EEEST
T ss_pred             EEeCC
Confidence             4544

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=98.48  E-value=2.9e-06  Score=61.86  Aligned_cols=114  Identities=17%  Similarity=0.056  Sum_probs=78.5

Q ss_pred             chhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++...    +..++|++||..+..+.                    ..+...|+.+|...+.+.+.+
T Consensus       121 ~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~--------------------~~~~~~Y~asKaal~~~~~~l  180 (285)
T 3sc4_A          121 NGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK--------------------WLRPTPYMMAKYGMTLCALGI  180 (285)
T ss_dssp             HHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG--------------------GSCSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC--------------------CCCCchHHHHHHHHHHHHHHH
Confidence            579999999999988753    55799999995433210                    124478999999999999887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC-CCCcE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS-ASGRY  150 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~  150 (178)
                      +.+   .|+.+..++||.+....       ..   ........     ....+...+|+|++++.++..+. ..|..
T Consensus       181 a~e~~~~gI~vn~v~PG~~v~t~-------~~---~~~~~~~~-----~~~r~~~pedvA~~~~~l~s~~~~~tG~~  242 (285)
T 3sc4_A          181 AEELRDAGIASNTLWPRTTVATA-------AV---QNLLGGDE-----AMARSRKPEVYADAAYVVLNKPSSYTGNT  242 (285)
T ss_dssp             HHHTGGGTCEEEEEECSSCBCCH-------HH---HHHHTSCC-----CCTTCBCTHHHHHHHHHHHTSCTTCCSCE
T ss_pred             HHHhcccCcEEEEEeCCCccccH-------HH---Hhhccccc-----cccCCCCHHHHHHHHHHHhCCcccccceE
Confidence            766   58999999998543221       11   12221211     12346789999999999998764 34444

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=98.47  E-value=6e-07  Score=70.76  Aligned_cols=129  Identities=12%  Similarity=0.007  Sum_probs=90.0

Q ss_pred             chhHHHHHHHHHHHHHhC-CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.|+.++.+++... +.++||++||++++++.                     .....|+.+|...|.+.+++ +.
T Consensus       363 ~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~---------------------~g~~~YaaaKa~ld~la~~~-~~  420 (511)
T 2z5l_A          363 RGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGN---------------------AGQGAYAAANAALDALAERR-RA  420 (511)
T ss_dssp             HHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCC---------------------TTBHHHHHHHHHHHHHHHHH-HT
T ss_pred             HHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCC---------------------CCCHHHHHHHHHHHHHHHHH-HH
Confidence            578999999999999877 78899999997666642                     13467999999999999875 46


Q ss_pred             cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEEecCccCHH
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRG  160 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~  160 (178)
                      .|+++++++||.+-+.+....  .....+ .          .....+++.+|+++++..++..+..  .+.+.  .+.|.
T Consensus       421 ~gi~v~sv~pG~~~~tgm~~~--~~~~~~-~----------~~g~~~l~~e~~a~~l~~al~~~~~--~v~v~--~~d~~  483 (511)
T 2z5l_A          421 AGLPATSVAWGLWGGGGMAAG--AGEESL-S----------RRGLRAMDPDAAVDALLGAMGRNDV--CVTVV--DVDWE  483 (511)
T ss_dssp             TTCCCEEEEECCBCSTTCCCC--HHHHHH-H----------HHTBCCBCHHHHHHHHHHHHHHTCS--EEEEC--CBCHH
T ss_pred             cCCcEEEEECCcccCCccccc--ccHHHH-H----------hcCCCCCCHHHHHHHHHHHHhCCCC--EEEEE--eCCHH
Confidence            699999999997743322211  111111 1          1224578999999999999976532  23333  35677


Q ss_pred             HHHHHHHHh
Q 030406          161 EVVEILAKF  169 (178)
Q Consensus       161 e~~~~i~~~  169 (178)
                      .+...+...
T Consensus       484 ~~~~~~~~~  492 (511)
T 2z5l_A          484 RFAPATNAI  492 (511)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHhhhccc
Confidence            777665543

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=98.47  E-value=2.9e-06  Score=61.94  Aligned_cols=121  Identities=14%  Similarity=0.061  Sum_probs=80.1

Q ss_pred             chhHHHHHHHHHHHHHhC----C------CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----K------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE   71 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~------~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E   71 (178)
                      +++|+.++.++++++...    +      ..+||++||.++..+                     ..+...|+.+|...+
T Consensus       144 ~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~  202 (288)
T 2x9g_A          144 IGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQP---------------------CMAFSLYNMGKHALV  202 (288)
T ss_dssp             HHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTTTTSC---------------------CTTCHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecccccCC---------------------CCCCchHHHHHHHHH
Confidence            578999999999888642    2      458999999533221                     124567999999999


Q ss_pred             HHHHHHHHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCccc-ccHHHHHHHHHHhhcCC--C
Q 030406           72 KAAWEEAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAY-VHVRDVALAHILVYETP--S  145 (178)
Q Consensus        72 ~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~D~a~~~~~~~~~~--~  145 (178)
                      .+.+.++.+.   |+++.+++||.+.++. .. ...   .........+      ...+ ..++|+|++++.++...  .
T Consensus       203 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~-~~~---~~~~~~~~~p------~~r~~~~pedvA~~v~~l~s~~~~~  271 (288)
T 2x9g_A          203 GLTQSAALELAPYGIRVNGVAPGVSLLPV-AM-GEE---EKDKWRRKVP------LGRREASAEQIADAVIFLVSGSAQY  271 (288)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEESSCSCCT-TS-CHH---HHHHHHHTCT------TTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHhhccCeEEEEEEeccccCcc-cc-ChH---HHHHHHhhCC------CCCCCCCHHHHHHHHHHHhCccccC
Confidence            9988776653   8999999999998875 21 111   1112221111      1124 68999999999998753  2


Q ss_pred             CCCcE-EEec
Q 030406          146 ASGRY-LCAE  154 (178)
Q Consensus       146 ~~~~~-~~~~  154 (178)
                      ..|.+ .+.+
T Consensus       272 itG~~i~vdG  281 (288)
T 2x9g_A          272 ITGSIIKVDG  281 (288)
T ss_dssp             CCSCEEEEST
T ss_pred             ccCCEEEECc
Confidence            34544 4544

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=98.45  E-value=3.7e-07  Score=65.86  Aligned_cols=127  Identities=9%  Similarity=-0.016  Sum_probs=77.7

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...  +..++|++||..+..+                     ......|+.+|...+.+.+.++.
T Consensus       119 ~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~la~  177 (262)
T 3ksu_A          119 DTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAY---------------------TGFYSTYAGNKAPVEHYTRAASK  177 (262)
T ss_dssp             HHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHH---------------------HCCCCC-----CHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccC---------------------CCCCchhHHHHHHHHHHHHHHHH
Confidence            578999999999999874  4468999999544432                     12345699999999999998877


Q ss_pred             hc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC-CCCC-cEEEec
Q 030406           80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP-SASG-RYLCAE  154 (178)
Q Consensus        80 ~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-~~~~-~~~~~~  154 (178)
                      +.   |+.+..++||.+..+.........   .......     ......+..++|+|++++.++... ...| .+++.|
T Consensus       178 e~~~~gi~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~-----~~~~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdG  249 (262)
T 3ksu_A          178 ELMKQQISVNAIAPGPMDTSFFYGQETKE---STAFHKS-----QAMGNQLTKIEDIAPIIKFLTTDGWWINGQTIFANG  249 (262)
T ss_dssp             HTTTTTCEEEEEEECCCCTHHHHTCC--------------------CCCCSCCGGGTHHHHHHHHTTTTTCCSCEEEEST
T ss_pred             HHHHcCcEEEEEeeCCCcCccccccCchH---HHHHHHh-----cCcccCCCCHHHHHHHHHHHcCCCCCccCCEEEECC
Confidence            75   799999999988543211100000   0000000     112334678999999999988752 2345 446755


Q ss_pred             Ccc
Q 030406          155 SVL  157 (178)
Q Consensus       155 ~~~  157 (178)
                      ...
T Consensus       250 g~~  252 (262)
T 3ksu_A          250 GYT  252 (262)
T ss_dssp             TCC
T ss_pred             Ccc
Confidence            443

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=98.45  E-value=1.4e-06  Score=64.64  Aligned_cols=103  Identities=15%  Similarity=0.116  Sum_probs=73.6

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++.    +.+..+||++||.++.++.                     .+...|+.+|...+.+.+.+
T Consensus       120 ~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~---------------------~~~~~Y~aSK~a~~~~~~~l  178 (319)
T 1gz6_A          120 QRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN---------------------FGQANYSAAKLGLLGLANTL  178 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC---------------------CCCHHHHHHHHHHHHHHHHH
Confidence            5789999988888874    4456799999997666542                     13467999999999999887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   .|+.+.+++||.+ .+- ...   ..              +.....++.++|++++++.++..+
T Consensus       179 a~el~~~gI~vn~v~PG~~-t~~-~~~---~~--------------~~~~~~~~~p~dvA~~~~~l~s~~  229 (319)
T 1gz6_A          179 VIEGRKNNIHCNTIAPNAG-SRM-TET---VM--------------PEDLVEALKPEYVAPLVLWLCHES  229 (319)
T ss_dssp             HHHTGGGTEEEEEEEEECC-STT-TGG---GS--------------CHHHHHHSCGGGTHHHHHHHTSTT
T ss_pred             HHHhcccCEEEEEEeCCCc-ccc-ccc---cC--------------ChhhhccCCHHHHHHHHHHHhCch
Confidence            765   4899999999976 221 110   00              001123467899999999888764

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=98.45  E-value=7.5e-07  Score=64.77  Aligned_cols=125  Identities=14%  Similarity=0.141  Sum_probs=83.0

Q ss_pred             chhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++..    .+ -.++|++||.++..+..                   ..+...|+.+|...+.+.+.
T Consensus       137 ~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~-------------------~~~~~~Y~asKaa~~~l~~~  197 (276)
T 3r1i_A          137 QDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINI-------------------PQQVSHYCTSKAAVVHLTKA  197 (276)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCC-------------------SSCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCC-------------------CCCcchHHHHHHHHHHHHHH
Confidence            57899999999988764    23 26899999954432210                   12456799999999999998


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC-cE
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG-RY  150 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~  150 (178)
                      ++.+   .|+++..++||.+..+..... ..    .........     ....+..++|+|++++.++....  ..| .+
T Consensus       198 la~e~~~~gIrvn~v~PG~v~T~~~~~~-~~----~~~~~~~~~-----p~~r~~~pedvA~~v~fL~s~~~~~itG~~i  267 (276)
T 3r1i_A          198 MAVELAPHQIRVNSVSPGYIRTELVEPL-AD----YHALWEPKI-----PLGRMGRPEELTGLYLYLASAASSYMTGSDI  267 (276)
T ss_dssp             HHHHHGGGTEEEEEEEECCBCSTTTGGG-GG----GHHHHGGGS-----TTSSCBCGGGSHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHhhcCcEEEEEeeCCCcCCccccc-hH----HHHHHHhcC-----CCCCCcCHHHHHHHHHHHcCccccCccCcEE
Confidence            7766   589999999999976543221 11    111111111     12346789999999999887532  345 55


Q ss_pred             EEecC
Q 030406          151 LCAES  155 (178)
Q Consensus       151 ~~~~~  155 (178)
                      ++.+.
T Consensus       268 ~vdGG  272 (276)
T 3r1i_A          268 VIDGG  272 (276)
T ss_dssp             EESTT
T ss_pred             EECcC
Confidence            66543

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=98.43  E-value=1.1e-06  Score=64.00  Aligned_cols=117  Identities=12%  Similarity=0.069  Sum_probs=77.5

Q ss_pred             chhHHHHHHHHHHHHHh----CC--CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW   75 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~--~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~   75 (178)
                      +++|+.|+.++++++..    .+  ..+||++||.++..+                     ..+...|+.+|...+.+.+
T Consensus       140 ~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~  198 (281)
T 4dry_A          140 VAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP---------------------RPNSAPYTATKHAITGLTK  198 (281)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC---------------------CTTCHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC---------------------CCCChhHHHHHHHHHHHHH
Confidence            57899998888777653    32  468999999644321                     1245779999999999988


Q ss_pred             HHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccC-CCCcccccHHHHHHHHHHhhcCCCCCCcE
Q 030406           76 EEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYA-NSVQAYVHVRDVALAHILVYETPSASGRY  150 (178)
Q Consensus        76 ~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~D~a~~~~~~~~~~~~~~~~  150 (178)
                      .++.+   .|+.+..++||.+..+-...           .......... .....++.++|+|++++.++..+......
T Consensus       199 ~la~e~~~~gI~vn~v~PG~v~T~~~~~-----------~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~i~  266 (281)
T 4dry_A          199 STALDGRMHDIACGQIDIGNAATDMTAR-----------MSTGVLQANGEVAAEPTIPIEHIAEAVVYMASLPLSANVL  266 (281)
T ss_dssp             HHHHHHGGGTEEEEEEEEECBCC------------------CEEECTTSCEEECCCBCHHHHHHHHHHHHHSCTTEEEE
T ss_pred             HHHHHhcccCeEEEEEEECcCcChhhhh-----------hcchhhhhhhcccccCCCCHHHHHHHHHHHhCCCccCccc
Confidence            87655   58999999999886542111           0000000011 11234788999999999999987665433

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=98.41  E-value=3.4e-06  Score=63.31  Aligned_cols=118  Identities=15%  Similarity=0.102  Sum_probs=80.4

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..+||++||..+..+.                   +......|+.+|...+.+.+.+
T Consensus       157 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~-------------------~~~~~~~Y~aSKaal~~l~~~l  217 (346)
T 3kvo_A          157 MNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV-------------------WFKQHCAYTIAKYGMSMYVLGM  217 (346)
T ss_dssp             HHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG-------------------GTSSSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC-------------------CCCCchHHHHHHHHHHHHHHHH
Confidence            6789999999999984    4456799999995433210                   1134578999999999999988


Q ss_pred             HHhc--CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC-CCCcEEEec
Q 030406           78 AVAR--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS-ASGRYLCAE  154 (178)
Q Consensus        78 ~~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~~~~~  154 (178)
                      +.+.  ++.+..+.|+.++...       .    ...+.+..     ....+..++|+|++++.++.... ..|.+++.+
T Consensus       218 a~e~~~gIrvn~v~PG~~i~T~-------~----~~~~~~~~-----~~~r~~~pedvA~~v~~L~s~~~~itG~~ivdg  281 (346)
T 3kvo_A          218 AEEFKGEIAVNALWPKTAIHTA-------A----MDMLGGPG-----IESQCRKVDIIADAAYSIFQKPKSFTGNFVIDE  281 (346)
T ss_dssp             HHHTTTTCEEEEEECSBCBCCH-------H----HHHHCC-------CGGGCBCTHHHHHHHHHHHTSCTTCCSCEEEHH
T ss_pred             HHHhcCCcEEEEEeCCCccccH-------H----HHhhcccc-----ccccCCCHHHHHHHHHHHHhcCCCCCceEEECC
Confidence            7774  7888999999644321       1    12222221     12346689999999999997732 355555533

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=98.41  E-value=4.4e-06  Score=59.01  Aligned_cols=107  Identities=16%  Similarity=0.095  Sum_probs=74.9

Q ss_pred             chhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.++++++...   +..++|++||..+.++.                     .....|+.+|...+.+.+.+.
T Consensus       108 ~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~---------------------~~~~~Y~~sKaa~~~~~~~l~  166 (235)
T 3l77_A          108 IEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLI---------------------PYGGGYVSTKWAARALVRTFQ  166 (235)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCC---------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccC---------------------CCcchHHHHHHHHHHHHHHHh
Confidence            578999999999998642   33577888774443321                     134679999999999998864


Q ss_pred             Hh-cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC
Q 030406           79 VA-RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA  146 (178)
Q Consensus        79 ~~-~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  146 (178)
                      .+ .++++..++||.+-.+-.....            .     ......++.++|+|++++.++..+..
T Consensus       167 ~~~~~i~v~~v~PG~v~T~~~~~~~------------~-----~~~~~~~~~p~dva~~v~~l~~~~~~  218 (235)
T 3l77_A          167 IENPDVRFFELRPGAVDTYFGGSKP------------G-----KPKEKGYLKPDEIAEAVRCLLKLPKD  218 (235)
T ss_dssp             HHCTTSEEEEEEECSBSSSTTTCCS------------C-----CCGGGTCBCHHHHHHHHHHHHTSCTT
T ss_pred             hcCCCeEEEEEeCCccccccccccC------------C-----cccccCCCCHHHHHHHHHHHHcCCCC
Confidence            33 4899999999988554211100            0     01122578899999999999988754

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=98.40  E-value=6.7e-07  Score=63.73  Aligned_cols=105  Identities=14%  Similarity=-0.002  Sum_probs=74.0

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++.    +.+..++|++||..+..+                     ..+...|+.+|...+.+.+.+
T Consensus       123 ~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------------------~~~~~~Y~~sK~a~~~~~~~l  181 (247)
T 3i1j_A          123 MHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKG---------------------RANWGAYGVSKFATEGLMQTL  181 (247)
T ss_dssp             HHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCC---------------------CCCcchhHHHHHHHHHHHHHH
Confidence            5789999999999884    455679999999544321                     124468999999999999887


Q ss_pred             HHh----cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+    .++.+..++||.+-.+-        .   ......      .....+...+|++++++.++...
T Consensus       182 a~e~~~~~~i~v~~v~PG~v~t~~--------~---~~~~~~------~~~~~~~~p~dva~~~~~l~s~~  235 (247)
T 3i1j_A          182 ADELEGVTAVRANSINPGATRTGM--------R---AQAYPD------ENPLNNPAPEDIMPVYLYLMGPD  235 (247)
T ss_dssp             HHHHTTTSSEEEEEEECCCCSSHH--------H---HHHSTT------SCGGGSCCGGGGTHHHHHHHSGG
T ss_pred             HHHhcCCCCeEEEEEecCcccCcc--------c---hhcccc------cCccCCCCHHHHHHHHHHHhCch
Confidence            765    46888899999884321        0   111111      12234567899999999988643

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=98.39  E-value=1.4e-06  Score=61.96  Aligned_cols=105  Identities=10%  Similarity=-0.011  Sum_probs=74.6

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...  +-.+||++||.++..+                     ..+...|+.+|...+.+.+.++.
T Consensus       105 ~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asK~a~~~~~~~la~  163 (241)
T 1dhr_A          105 WKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG---------------------TPGMIGYGMAKGAVHQLCQSLAG  163 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC---------------------CTTBHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccC---------------------CCCchHHHHHHHHHHHHHHHHHH
Confidence            578999999999998763  1258999999544321                     12446799999999999998876


Q ss_pred             hc-----CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           80 AR-----GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        80 ~~-----~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.     |+++..++||.+-.+-        .    ......     .....++..+|+|++++.++...
T Consensus       164 e~~~~~~gi~v~~v~PG~v~T~~--------~----~~~~~~-----~~~~~~~~~~~vA~~v~~l~~~~  216 (241)
T 1dhr_A          164 KNSGMPSGAAAIAVLPVTLDTPM--------N----RKSMPE-----ADFSSWTPLEFLVETFHDWITGN  216 (241)
T ss_dssp             TTSSCCTTCEEEEEEESCEECHH--------H----HHHSTT-----SCGGGSEEHHHHHHHHHHHHTTT
T ss_pred             HhccCCCCeEEEEEecCcccCcc--------c----cccCcc-----hhhccCCCHHHHHHHHHHHhcCC
Confidence            53     5999999999885431        1    111011     11234678899999999988654

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=98.38  E-value=4.3e-06  Score=60.06  Aligned_cols=117  Identities=21%  Similarity=0.144  Sum_probs=70.9

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++.+++.    +.+..++|++||.++..+                      .+...|+.+|...+.+.+.+
T Consensus       118 ~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------------~~~~~Y~asK~a~~~~~~~l  175 (260)
T 2qq5_A          118 NNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY----------------------MFNVPYGVGKAACDKLAADC  175 (260)
T ss_dssp             HTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC----------------------CSSHHHHHHHHHHHHHHHHH
T ss_pred             HhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC----------------------CCCCchHHHHHHHHHHHHHH
Confidence            4578888877666554    456689999999533210                      13467999999999998887


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   .|+++.+++||.+..+-..................    ......-+...+|+|++++.++..+
T Consensus       176 a~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~pe~va~~v~~l~s~~  241 (260)
T 2qq5_A          176 AHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQ----FKSAFSSAETTELSGKCVVALATDP  241 (260)
T ss_dssp             HHHHGGGTCEEEEEECCCSCTTTC--------------------------CHHHHHHHHHHHHHHHHTCT
T ss_pred             HHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHH----HHhhhccCCCHHHHHHHHHHHhcCc
Confidence            654   58999999999997653211000000000000000    0000112467999999999998765

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=98.36  E-value=3.6e-06  Score=65.43  Aligned_cols=123  Identities=15%  Similarity=0.075  Sum_probs=79.5

Q ss_pred             chhHHHHHHHHHHHHHhC----CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++.+++...    +..+||++||+++..+.                     .....|+.+|...+.+.+.+
T Consensus       316 ~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~---------------------~g~~~YaasKaal~~l~~~l  374 (454)
T 3u0b_A          316 IAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGN---------------------RGQTNYATTKAGMIGLAEAL  374 (454)
T ss_dssp             HHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCC---------------------CCCHHHHHHHHHHHHHHHHH
Confidence            678999999999999865    56799999997665532                     24467999999888877766


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~  151 (178)
                      +.+   .|+++..+.||.+..+-.... .....   ......     .....+...+|+++++..++...  ...| .++
T Consensus       375 a~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~---~~~~~~-----~~l~r~g~pedvA~~v~fL~s~~a~~itG~~i~  445 (454)
T 3u0b_A          375 APVLADKGITINAVAPGFIETKMTEAI-PLATR---EVGRRL-----NSLFQGGQPVDVAELIAYFASPASNAVTGNTIR  445 (454)
T ss_dssp             HHHHHTTTCEEEEEEECSBCC-----------C---HHHHHS-----BTTSSCBCHHHHHHHHHHHHCGGGTTCCSCEEE
T ss_pred             HHHhhhcCcEEEEEEcCcccChhhhhc-chhhH---HHHHhh-----ccccCCCCHHHHHHHHHHHhCCccCCCCCcEEE
Confidence            543   489999999999965432110 00000   000000     11233567999999999888643  2345 445


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       446 vdG  448 (454)
T 3u0b_A          446 VCG  448 (454)
T ss_dssp             ESS
T ss_pred             ECC
Confidence            544

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=98.27  E-value=1.7e-05  Score=58.01  Aligned_cols=122  Identities=12%  Similarity=0.002  Sum_probs=80.0

Q ss_pred             chhHHHHHHHHHHHHHh----CC------CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE   71 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~------~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E   71 (178)
                      +++|+.++.++++++..    .+      ..+||++||..+..+                     ......|+.+|...+
T Consensus       147 ~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~  205 (291)
T 1e7w_A          147 FGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP---------------------LLGYTIYTMAKGALE  205 (291)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSC---------------------CTTCHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCC---------------------CCCCchhHHHHHHHH
Confidence            57899999999988763    34      578999999543321                     124467999999999


Q ss_pred             HHHHHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CC
Q 030406           72 KAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SA  146 (178)
Q Consensus        72 ~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~  146 (178)
                      .+.+.++.+   .|+.+..++||.+..+- .  ..   ...........+ .+   .-+..++|+|++++.++..+  ..
T Consensus       206 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--~~---~~~~~~~~~~~p-~~---~r~~~pedvA~~v~~l~s~~~~~i  275 (291)
T 1e7w_A          206 GLTRSAALELAPLQIRVNGVGPGLSVLVD-D--MP---PAVWEGHRSKVP-LY---QRDSSAAEVSDVVIFLCSSKAKYI  275 (291)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--SC---HHHHHHHHTTCT-TT---TSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--CC---HHHHHHHHhhCC-CC---CCCCCHHHHHHHHHHHhCCcccCc
Confidence            998877655   47999999999986543 1  11   111111212111 11   03678999999999998643  23


Q ss_pred             CCc-EEEec
Q 030406          147 SGR-YLCAE  154 (178)
Q Consensus       147 ~~~-~~~~~  154 (178)
                      .|. +.+.+
T Consensus       276 tG~~i~vdG  284 (291)
T 1e7w_A          276 TGTCVKVDG  284 (291)
T ss_dssp             CSCEEEEST
T ss_pred             cCcEEEECC
Confidence            454 45544

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=98.25  E-value=5.7e-06  Score=60.20  Aligned_cols=127  Identities=17%  Similarity=0.080  Sum_probs=79.3

Q ss_pred             chhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.++++++...   +-.++|++||..+.++                     ......|+.+|...+.+.+.++
T Consensus       112 ~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~l~~~la  170 (281)
T 3zv4_A          112 FHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYP---------------------NGGGPLYTATKHAVVGLVRQMA  170 (281)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSS---------------------SSSCHHHHHHHHHHHHHHHHHH
T ss_pred             HhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccC---------------------CCCCchhHHHHHHHHHHHHHHH
Confidence            568999999999988642   2268999999644332                     1244679999999999999887


Q ss_pred             HhcC--CcEEEecCCceeCCCCCCCChhh----HH--HHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC---CC
Q 030406           79 VARG--VDLVVVNPVLVLGPLLQSTVNAS----II--HILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS---AS  147 (178)
Q Consensus        79 ~~~~--~~~~i~R~~~v~G~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~  147 (178)
                      .+.+  +.+..+.||.+..+-........    ..  .+.......     ....-+..++|+|++++.++..+.   ..
T Consensus       171 ~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~r~~~pedvA~~v~fL~s~~~~~~it  245 (281)
T 3zv4_A          171 FELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSV-----LPIGRMPALEEYTGAYVFFATRGDSLPAT  245 (281)
T ss_dssp             HHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHT-----CTTSSCCCGGGGSHHHHHHHSTTTSTTCS
T ss_pred             HHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhc-----CCCCCCCCHHHHHHHHHHhhccccccccc
Confidence            7643  88889999998765321110000    00  011111111     122346789999999999987332   34


Q ss_pred             C-cEEEec
Q 030406          148 G-RYLCAE  154 (178)
Q Consensus       148 ~-~~~~~~  154 (178)
                      | .+++.+
T Consensus       246 G~~i~vdG  253 (281)
T 3zv4_A          246 GALLNYDG  253 (281)
T ss_dssp             SCEEEESS
T ss_pred             CcEEEECC
Confidence            5 445644

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=98.24  E-value=9.5e-06  Score=58.78  Aligned_cols=115  Identities=16%  Similarity=0.073  Sum_probs=77.0

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..++|++||..+..+.                   .......|+.+|...+.+.+.+
T Consensus       118 ~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-------------------~~~~~~~Y~asKaal~~l~~~l  178 (274)
T 3e03_A          118 QQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA-------------------WWGAHTGYTLAKMGMSLVTLGL  178 (274)
T ss_dssp             HHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH-------------------HHHHCHHHHHHHHHHHHHHHHH
T ss_pred             HhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC-------------------CCCCCchHHHHHHHHHHHHHHH
Confidence            57899999999988753    456799999995433210                   0134567999999999998877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCCcEEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASGRYLC  152 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~  152 (178)
                      +.+   .|+.+..++||.+......           ....+      .....+..++|+|++++.++..+.  ..|.+++
T Consensus       179 a~e~~~~gI~vn~v~PG~~v~T~~~-----------~~~~~------~~~~~~~~pedvA~~v~~l~s~~~~~itG~~i~  241 (274)
T 3e03_A          179 AAEFGPQGVAINALWPRTVIATDAI-----------NMLPG------VDAAACRRPEIMADAAHAVLTREAAGFHGQFLI  241 (274)
T ss_dssp             HHHHGGGTCEEEEEECSBCBCC------------------C------CCGGGSBCTHHHHHHHHHHHTSCCTTCCSCEEE
T ss_pred             HHHhhhcCEEEEEEECCcccccchh-----------hhccc------ccccccCCHHHHHHHHHHHhCccccccCCeEEE
Confidence            665   4799999999964433211           11111      112236789999999999987643  2455544

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=98.20  E-value=4e-05  Score=56.13  Aligned_cols=120  Identities=15%  Similarity=0.008  Sum_probs=75.3

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCC--CccCCCCCCc--------------------hhh
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPD--DVVDESCWSD--------------------LEF   55 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~--~~~~E~~~~~--------------------~~~   55 (178)
                      +++|+.|+.++++++.    +.+..+||++||..+.++.......  ...+++.+..                    ...
T Consensus       149 ~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (311)
T 3o26_A          149 LKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNG  228 (311)
T ss_dssp             HHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTT
T ss_pred             eeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhcccccccc
Confidence            6789999888888875    3456799999997655442111000  0000000000                    000


Q ss_pred             hcccCchHHHHHHHHHHHHHHHHHhc-CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHH
Q 030406           56 CKNTKNWYCYGKAVAEKAAWEEAVAR-GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVA  134 (178)
Q Consensus        56 ~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  134 (178)
                      ...+...|+.||.+.+.+.+.++.+. ++.+..++||.|..+-...                        ......++.+
T Consensus       229 ~~~~~~~Y~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~~~~~------------------------~~~~~~~~~a  284 (311)
T 3o26_A          229 WPSFGAAYTTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTEMNYG------------------------IGNYTAEEGA  284 (311)
T ss_dssp             CCSSCHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSGGGTT------------------------CCSBCHHHHH
T ss_pred             CcccchhhHHHHHHHHHHHHHHHhhcCCceEEEecCCceecCCcCC------------------------CCCCCHHHHH
Confidence            01244679999999999999988876 6888899999886432111                        1124678888


Q ss_pred             HHHHHhhcCCC
Q 030406          135 LAHILVYETPS  145 (178)
Q Consensus       135 ~~~~~~~~~~~  145 (178)
                      +.++.++..++
T Consensus       285 ~~~~~~~~~~~  295 (311)
T 3o26_A          285 EHVVRIALFPD  295 (311)
T ss_dssp             HHHHHHHTCCS
T ss_pred             HHHHHHHhCCC
Confidence            88888876553

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=98.17  E-value=1.1e-05  Score=57.79  Aligned_cols=116  Identities=17%  Similarity=0.060  Sum_probs=73.0

Q ss_pred             chhHHHHHHHHHHHHHhC------CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW   75 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~------~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~   75 (178)
                      +++|+.|+.++++++...      +..+||++||.++..+                     ..+...|+.+|...+.+.+
T Consensus       123 ~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------~~~~~~Y~asKaa~~~~~~  181 (259)
T 1oaa_A          123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP---------------------YKGWGLYCAGKAARDMLYQ  181 (259)
T ss_dssp             HHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC---------------------CCCccHHHHHHHHHHHHHH
Confidence            578999999999999753      2357999999544321                     1245679999999999999


Q ss_pred             HHHHhcC-CcEEEecCCceeCCCCCCCChh-hHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           76 EEAVARG-VDLVVVNPVLVLGPLLQSTVNA-SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        76 ~~~~~~~-~~~~i~R~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      .++.+.+ +.+..++||.+-.+-....... .............     ....+..++|+|++++.++..
T Consensus       182 ~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-----p~~~~~~p~dvA~~v~~l~~~  246 (259)
T 1oaa_A          182 VLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLK-----SDGALVDCGTSAQKLLGLLQK  246 (259)
T ss_dssp             HHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHH-----HTTCSBCHHHHHHHHHHHHHH
T ss_pred             HHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhh-----hcCCcCCHHHHHHHHHHHHhh
Confidence            9887763 7777888887743210000000 0000001110000     123467899999999988864

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=98.11  E-value=6.1e-06  Score=59.38  Aligned_cols=74  Identities=18%  Similarity=0.133  Sum_probs=56.4

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++++++..    .+..+||++||..+.++.                     .....|+.+|...+.+.+.+
T Consensus       113 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------~~~~~Y~asK~a~~~~~~~l  171 (262)
T 1zem_A          113 LTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP---------------------PNMAAYGTSKGAIIALTETA  171 (262)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC---------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC---------------------CCCchHHHHHHHHHHHHHHH
Confidence            57899999999988764    356799999996444321                     13467999999999888776


Q ss_pred             HHh---cCCcEEEecCCceeCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGP   96 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~   96 (178)
                      +.+   .|+++.+++||.+..+
T Consensus       172 a~e~~~~gi~vn~v~PG~v~t~  193 (262)
T 1zem_A          172 ALDLAPYNIRVNAISPGYMGPG  193 (262)
T ss_dssp             HHHHGGGTEEEEEEEECSBCSS
T ss_pred             HHHHHhhCeEEEEEecCCcCcc
Confidence            543   4899999999988543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=98.07  E-value=1.8e-05  Score=62.09  Aligned_cols=111  Identities=12%  Similarity=-0.013  Sum_probs=80.0

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.|+.++.++++..+..+||++||++++++.                     .....|+.+|...+.+.++. +..
T Consensus       348 l~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~---------------------~g~~~YaAaKa~ldala~~~-~~~  405 (496)
T 3mje_A          348 MRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGS---------------------GGQPGYAAANAYLDALAEHR-RSL  405 (496)
T ss_dssp             HHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTC---------------------TTCHHHHHHHHHHHHHHHHH-HHT
T ss_pred             HHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCC---------------------CCcHHHHHHHHHHHHHHHHH-Hhc
Confidence            57899999999999999888999999997776642                     13467999999999998875 467


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA  146 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  146 (178)
                      |++++.+.||.+.+.+..... ...   ..+.        ......+..++.++++..++..+..
T Consensus       406 Gi~v~sV~pG~w~~~gm~~~~-~~~---~~l~--------~~g~~~l~pe~~~~~l~~~l~~~~~  458 (496)
T 3mje_A          406 GLTASSVAWGTWGEVGMATDP-EVH---DRLV--------RQGVLAMEPEHALGALDQMLENDDT  458 (496)
T ss_dssp             TCCCEEEEECEESSSCC-------C---HHHH--------HTTEEEECHHHHHHHHHHHHHHTCS
T ss_pred             CCeEEEEECCcccCCccccCh-HHH---HHHH--------hcCCCCCCHHHHHHHHHHHHcCCCc
Confidence            999999999988654422110 000   0111        1123456789999999999876643

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=98.03  E-value=0.00015  Score=51.96  Aligned_cols=127  Identities=13%  Similarity=0.021  Sum_probs=77.8

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+..+.+++..    .+--++|++||+++..+.                     .....|+.+|.....+.+..
T Consensus       113 ~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~---------------------~~~~~Y~asKaal~~ltr~l  171 (254)
T 4fn4_A          113 LAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGG---------------------FAGAPYTVAKHGLIGLTRSI  171 (254)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSS---------------------SSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCC---------------------CCChHHHHHHHHHHHHHHHH
Confidence            67899998888777653    455689999997554321                     23467999999999887776


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCcE-E
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGRY-L  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~-~  151 (178)
                      +.+.   |+++-.+.||.+--+-................. ..+..+    -+...+|+|++++.++...  -..|.. .
T Consensus       172 A~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~-~~~~~~----R~g~pediA~~v~fLaSd~a~~iTG~~i~  246 (254)
T 4fn4_A          172 AAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTK-LMSLSS----RLAEPEDIANVIVFLASDEASFVNGDAVV  246 (254)
T ss_dssp             HHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHH-HHTTCC----CCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHh-cCCCCC----CCcCHHHHHHHHHHHhCchhcCCcCCEEE
Confidence            5544   788999999988654221111111111111111 111111    2456899999999988543  235544 4


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.|
T Consensus       247 VDG  249 (254)
T 4fn4_A          247 VDG  249 (254)
T ss_dssp             EST
T ss_pred             eCC
Confidence            533

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=97.96  E-value=2.3e-05  Score=57.98  Aligned_cols=131  Identities=11%  Similarity=0.021  Sum_probs=64.9

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccC-chHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK-NWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++.++++++...  .-.+||++||.++..+.                     ... ..|+.+|...+.+.+.++
T Consensus       163 ~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~---------------------~~~~~~Y~asKaal~~l~~~la  221 (319)
T 2ptg_A          163 VSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVI---------------------PGYGGGMSSAKAALESDCRTLA  221 (319)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC---------------------------------------THHHHHHHH
T ss_pred             HhHhhHHHHHHHHHHHHHHhcCceEEEEecccccccc---------------------CccchhhHHHHHHHHHHHHHHH
Confidence            578999999999999864  12589999996443211                     112 469999999999988765


Q ss_pred             Hh----cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCcE-E
Q 030406           79 VA----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGRY-L  151 (178)
Q Consensus        79 ~~----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~-~  151 (178)
                      .+    .|+.+..++||.+..+-...........+........ .......-+..++|+|++++.++...  ...|.+ .
T Consensus       222 ~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~  300 (319)
T 2ptg_A          222 FEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYS-EANAPLQKELESDDVGRAALFLLSPLARAVTGATLY  300 (319)
T ss_dssp             HHHHHHHCCEEEEEEECCCC--------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHhccccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHH-hccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEE
Confidence            54    5899999999998654211100000000000000000 00001123568999999999988753  235544 4


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       301 vdG  303 (319)
T 2ptg_A          301 VDN  303 (319)
T ss_dssp             EST
T ss_pred             ECC
Confidence            544

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=97.92  E-value=5.9e-05  Score=59.67  Aligned_cols=129  Identities=12%  Similarity=-0.022  Sum_probs=87.1

Q ss_pred             chhHHHHHHHHHHHHHhCC-----CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAK-----VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~-----~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.|+.+|.+++....     ..+||++||++++++.                     .....|+.+|...+.+..+
T Consensus       370 ~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~---------------------~g~~~YaaaKa~l~~lA~~  428 (525)
T 3qp9_A          370 VTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG---------------------AGQGAYAAGTAFLDALAGQ  428 (525)
T ss_dssp             HHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC---------------------TTCHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC---------------------CCCHHHHHHHHHHHHHHHH
Confidence            5789999999999998765     7899999997766542                     1346799999999998766


Q ss_pred             HHHhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEEecCc
Q 030406           77 EAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAESV  156 (178)
Q Consensus        77 ~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~  156 (178)
                      + ...|++++.+.||.+ +.+....  ....   ..+.       ......+..+++++++..++..+..  ...+  ..
T Consensus       429 ~-~~~gi~v~sI~pG~~-~tgm~~~--~~~~---~~~~-------~~g~~~l~pee~a~~l~~~l~~~~~--~v~v--~~  490 (525)
T 3qp9_A          429 H-RADGPTVTSVAWSPW-EGSRVTE--GATG---ERLR-------RLGLRPLAPATALTALDTALGHGDT--AVTI--AD  490 (525)
T ss_dssp             C-CSSCCEEEEEEECCB-TTSGGGS--SHHH---HHHH-------HTTBCCBCHHHHHHHHHHHHHHTCS--EEEE--CC
T ss_pred             H-HhCCCCEEEEECCcc-ccccccc--hhhH---HHHH-------hcCCCCCCHHHHHHHHHHHHhCCCC--eEEE--Ee
Confidence            4 456899999999988 4332111  1111   1111       1123457899999999999976532  2222  24


Q ss_pred             cCHHHHHHHHHHh
Q 030406          157 LHRGEVVEILAKF  169 (178)
Q Consensus       157 ~s~~e~~~~i~~~  169 (178)
                      +.|..+...+...
T Consensus       491 ~dw~~~~~~~~~~  503 (525)
T 3qp9_A          491 VDWSSFAPGFTTA  503 (525)
T ss_dssp             BCHHHHHHHHHSS
T ss_pred             CCHHHHHhhcccc
Confidence            5666666655443

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=97.87  E-value=6.6e-05  Score=60.51  Aligned_cols=103  Identities=16%  Similarity=0.097  Sum_probs=71.0

Q ss_pred             chhHHHHHHHHHHHH----HhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAA----AEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++++++    ++.+..+||++||.++.++.                     .....|+.+|...+.+.+.+
T Consensus       130 ~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~---------------------~~~~~Y~asKaal~~lt~~l  188 (613)
T 3oml_A          130 NDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGN---------------------FGQVNYTAAKMGLIGLANTV  188 (613)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC---------------------CCChHHHHHHHHHHHHHHHH
Confidence            578999999999888    45566799999997666542                     13467999999999998877


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+.   |+.+..+.|+.+- +-....                  .+......+..+|+|++++.++...
T Consensus       189 a~e~~~~gI~vn~v~Pg~~t-~~~~~~------------------~~~~~~~~~~pedvA~~v~~L~s~~  239 (613)
T 3oml_A          189 AIEGARNNVLCNVIVPTAAS-RMTEGI------------------LPDILFNELKPKLIAPVVAYLCHES  239 (613)
T ss_dssp             HHHHGGGTEEEEEEEEC-------CCC------------------CCHHHHTTCCGGGTHHHHHHTTSTT
T ss_pred             HHHhCccCeEEEEEECCCCC-hhhhhc------------------cchhhhhcCCHHHHHHHHHHhcCCC
Confidence            6554   7888899998541 110000                  0011123357899999999888764

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.79  E-value=0.00021  Score=51.04  Aligned_cols=118  Identities=10%  Similarity=0.035  Sum_probs=75.7

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++..    .+ .++|++||..+..+.                     .....|+.||.....+.+.+
T Consensus       103 ~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~---------------------~~~~~Y~asKaal~~ltk~l  160 (247)
T 3ged_A          103 LSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSE---------------------PDSEAYASAKGGIVALTHAL  160 (247)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCC---------------------CCCHHHHHHHHHHHHHHHHH
Confidence            67899999888877753    34 689999996554321                     13357999999999988776


Q ss_pred             HHhc--CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcE-EEec
Q 030406           78 AVAR--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRY-LCAE  154 (178)
Q Consensus        78 ~~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~-~~~~  154 (178)
                      +.+.  ++++-.+.||.+--+....    ...   ......  ..+    -+...+|+|++++.++...-..|.. .+.|
T Consensus       161 A~ela~~IrVN~I~PG~i~t~~~~~----~~~---~~~~~~--Pl~----R~g~pediA~~v~fL~s~~~iTG~~i~VDG  227 (247)
T 3ged_A          161 AMSLGPDVLVNCIAPGWINVTEQQE----FTQ---EDCAAI--PAG----KVGTPKDISNMVLFLCQQDFITGETIIVDG  227 (247)
T ss_dssp             HHHHTTTSEEEEEEECSBCCCC-------CCH---HHHHTS--TTS----SCBCHHHHHHHHHHHHHCSSCCSCEEEEST
T ss_pred             HHHHCCCCEEEEEecCcCCCCCcHH----HHH---HHHhcC--CCC----CCcCHHHHHHHHHHHHhCCCCCCCeEEECc
Confidence            6554  6777789999884332111    111   111111  111    2456899999999999765556644 4533

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.72  E-value=0.00063  Score=49.26  Aligned_cols=127  Identities=16%  Similarity=0.095  Sum_probs=78.4

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.|+..+++++...  +-.++|++||..+..+.                     .....|+.+|.....+.+.++.
T Consensus       131 ~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~---------------------~~~~~Y~asKaav~~ltr~lA~  189 (273)
T 4fgs_A          131 FDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGT---------------------PAFSVYAASKAALRSFARNWIL  189 (273)
T ss_dssp             HHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCC---------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCC---------------------CCchHHHHHHHHHHHHHHHHHH
Confidence            689999999999998764  23579999996554321                     1345799999999999888766


Q ss_pred             hc---CCcEEEecCCceeCCCCCCCC---hhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCcE-
Q 030406           80 AR---GVDLVVVNPVLVLGPLLQSTV---NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGRY-  150 (178)
Q Consensus        80 ~~---~~~~~i~R~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~-  150 (178)
                      +.   |+++-.+.||.+--+......   ......+...+....| .+    -+...+|+|++++.++...  -..|.. 
T Consensus       190 Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~P-lg----R~g~peeiA~~v~FLaSd~a~~iTG~~i  264 (273)
T 4fgs_A          190 DLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVP-MG----RVGRAEEVAAAALFLASDDSSFVTGAEL  264 (273)
T ss_dssp             HTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHST-TS----SCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCC-CC----CCcCHHHHHHHHHHHhCchhcCccCCeE
Confidence            55   678888999988654321110   0111112222211111 11    2456899999999988543  235544 


Q ss_pred             EEec
Q 030406          151 LCAE  154 (178)
Q Consensus       151 ~~~~  154 (178)
                      .+.|
T Consensus       265 ~VDG  268 (273)
T 4fgs_A          265 FVDG  268 (273)
T ss_dssp             EEST
T ss_pred             eECc
Confidence            4543

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.65  E-value=0.0012  Score=46.90  Aligned_cols=125  Identities=10%  Similarity=0.079  Sum_probs=77.0

Q ss_pred             chhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.|+..+.+++...   +--++|++||+.+..+.                     .....|+.||.....+.+..+
T Consensus       104 ~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~---------------------~~~~~Y~asKaav~~ltr~lA  162 (242)
T 4b79_A          104 LRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGS---------------------ADRPAYSASKGAIVQLTRSLA  162 (242)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCC---------------------SSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCC---------------------CCCHHHHHHHHHHHHHHHHHH
Confidence            678999998888877531   22589999997554321                     234679999999999987765


Q ss_pred             Hh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEEE
Q 030406           79 VA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYLC  152 (178)
Q Consensus        79 ~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~  152 (178)
                      .+   +|+++-.+.||.+--+-.... ..............+  .    .-+...+|+|++++.++...  -..| .+.+
T Consensus       163 ~Ela~~gIrVNaV~PG~i~T~m~~~~-~~~~~~~~~~~~~~P--l----gR~g~peeiA~~v~fLaSd~a~~iTG~~l~V  235 (242)
T 4b79_A          163 CEYAAERIRVNAIAPGWIDTPLGAGL-KADVEATRRIMQRTP--L----ARWGEAPEVASAAAFLCGPGASFVTGAVLAV  235 (242)
T ss_dssp             HHHGGGTEEEEEEEECSBCCC------CCCHHHHHHHHHTCT--T----CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred             HHhhhcCeEEEEEEeCCCCChhhhcc-cCCHHHHHHHHhcCC--C----CCCcCHHHHHHHHHHHhCchhcCccCceEEE
Confidence            54   478888999998865422111 111111122222211  1    12456899999999888543  2345 3345


Q ss_pred             ec
Q 030406          153 AE  154 (178)
Q Consensus       153 ~~  154 (178)
                      .+
T Consensus       236 DG  237 (242)
T 4b79_A          236 DG  237 (242)
T ss_dssp             ST
T ss_pred             Cc
Confidence            44

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=97.65  E-value=0.00013  Score=53.79  Aligned_cols=128  Identities=15%  Similarity=0.080  Sum_probs=78.0

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...  .-.+||++||.++..+.+                    .....|+.+|...+.+.+.++.
T Consensus       150 ~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~--------------------~~~~~Y~asKaal~~l~~~la~  209 (315)
T 2o2s_A          150 SSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVVP--------------------GYGGGMSSAKAALESDTRTLAW  209 (315)
T ss_dssp             HHHHTHHHHHHHHHHSTTEEEEEEEEEEEEGGGTSCCT--------------------TCCTTHHHHHHHHHHHHHHHHH
T ss_pred             HhhhhHHHHHHHHHHHHHHhcCCEEEEEecccccccCC--------------------CccHHHHHHHHHHHHHHHHHHH
Confidence            578999999999999764  125899999964432110                    1114699999999999887655


Q ss_pred             h----cCCcEEEecCCceeCCCCCC----CChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCc
Q 030406           80 A----RGVDLVVVNPVLVLGPLLQS----TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGR  149 (178)
Q Consensus        80 ~----~~~~~~i~R~~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~  149 (178)
                      +    .|+.+..++||.+-.+-...    ........+........     ...-+...+|+|++++.++...  ...|.
T Consensus       210 el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-----p~~r~~~pedvA~~v~~L~s~~~~~itG~  284 (315)
T 2o2s_A          210 EAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNA-----PLRRDLHSDDVGGAALFLLSPLARAVSGV  284 (315)
T ss_dssp             HHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHHHHS-----SSCCCCCHHHHHHHHHHHTSGGGTTCCSC
T ss_pred             HhCcccCeEEEEEecccccchhhhhccccccchhHHHHHHHHhccC-----CCCCCCCHHHHHHHHHHHhCchhccCcCC
Confidence            4    58999999999885431000    00000111111111100     1123568999999999988643  23454


Q ss_pred             E-EEec
Q 030406          150 Y-LCAE  154 (178)
Q Consensus       150 ~-~~~~  154 (178)
                      + .+.+
T Consensus       285 ~i~vdG  290 (315)
T 2o2s_A          285 TLYVDN  290 (315)
T ss_dssp             EEEEST
T ss_pred             EEEECC
Confidence            4 4544

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=97.64  E-value=0.0015  Score=46.92  Aligned_cols=129  Identities=16%  Similarity=0.082  Sum_probs=76.9

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++.    +.+-.++|++||+.+..+.+                    .....|+.+|...+.+.+..
T Consensus       108 ~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~--------------------~~~~~Y~asKaal~~lt~~l  167 (261)
T 4h15_A          108 LSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLP--------------------ESTTAYAAAKAALSTYSKAM  167 (261)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCC--------------------CccHHHHHHHHHHHHHHHHH
Confidence            5789999888877765    34557899999965543211                    13467999999999887776


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCC----------ChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQST----------VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   +|+++-.+.||.+--+.....          ................ .    ..-+...+|+|++++.++...
T Consensus       168 A~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P----lgR~g~peevA~~v~fLaS~~  242 (261)
T 4h15_A          168 SKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGI-P----LGRPAKPEEVANLIAFLASDR  242 (261)
T ss_dssp             HHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCC-T----TSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCC-C----CCCCcCHHHHHHHHHHHhCch
Confidence            554   478899999998843210000          0000000011111110 1    112567999999999888543


Q ss_pred             --CCCC-cEEEecC
Q 030406          145 --SASG-RYLCAES  155 (178)
Q Consensus       145 --~~~~-~~~~~~~  155 (178)
                        -..| .+.+.|.
T Consensus       243 a~~itG~~i~VDGG  256 (261)
T 4h15_A          243 AASITGAEYTIDGG  256 (261)
T ss_dssp             GTTCCSCEEEESTT
T ss_pred             hcCccCcEEEECCc
Confidence              2345 4456554

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.63  E-value=0.0016  Score=46.81  Aligned_cols=128  Identities=19%  Similarity=0.201  Sum_probs=77.7

Q ss_pred             chhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++..+.+++...   +-.++|++||+++..+.                     .....|+.+|.....+.+..+
T Consensus       110 ~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~---------------------~~~~~Y~asKaav~~ltr~lA  168 (258)
T 4gkb_A          110 LERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQ---------------------GNTSGYCASKGAQLALTREWA  168 (258)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCC---------------------SSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCC---------------------CCchHHHHHHHHHHHHHHHHH
Confidence            578999988888877531   22589999997665431                     134679999999999987765


Q ss_pred             Hh---cCCcEEEecCCceeCCCCCCCChh--hHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCcE-
Q 030406           79 VA---RGVDLVVVNPVLVLGPLLQSTVNA--SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGRY-  150 (178)
Q Consensus        79 ~~---~~~~~~i~R~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~-  150 (178)
                      .+   +|+++-.+.||.+--+-.......  .............|.    .+-+...+|+|++++.++...  -..|.. 
T Consensus       169 ~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl----g~R~g~peeiA~~v~fLaS~~a~~iTG~~i  244 (258)
T 4gkb_A          169 VALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL----GRRFTTPDEIADTAVFLLSPRASHTTGEWL  244 (258)
T ss_dssp             HHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT----TTSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC----CCCCcCHHHHHHHHHHHhCchhcCccCCeE
Confidence            54   479999999999865432111000  000011111121111    123566899999999888543  235544 


Q ss_pred             EEec
Q 030406          151 LCAE  154 (178)
Q Consensus       151 ~~~~  154 (178)
                      .+.|
T Consensus       245 ~VDG  248 (258)
T 4gkb_A          245 FVDG  248 (258)
T ss_dssp             EEST
T ss_pred             EECC
Confidence            4544

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.61  E-value=0.00012  Score=52.69  Aligned_cols=127  Identities=12%  Similarity=-0.012  Sum_probs=78.3

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++++++...  .-.++|++||. +.++                     ......|+.+|...+.+.+.++.
T Consensus       120 ~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~-~~~~---------------------~~~~~~Y~asKaa~~~l~~~la~  177 (269)
T 2h7i_A          120 IHISAYSYASMAKALLPIMNPGGSIVGMDFD-PSRA---------------------MPAYNWMTVAKSALESVNRFVAR  177 (269)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEEEEEEEEEECC-CSSC---------------------CTTTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHhhccCCeEEEEcCc-cccc---------------------cCchHHHHHHHHHHHHHHHHHHH
Confidence            578999999999999763  12589999984 3221                     02346799999999999888766


Q ss_pred             h---cCCcEEEecCCceeCCCCCCC----Chhh----HHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--C
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQST----VNAS----IIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--A  146 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~----~~~~----~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~  146 (178)
                      +   .|+.+..++||.+-.+-....    ....    ...+........   + ..+.+...+|+|++++.++....  .
T Consensus       178 e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p-~~rr~~~p~dvA~~v~~L~s~~~~~i  253 (269)
T 2h7i_A          178 EAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRA---P-IGWNMKDATPVAKTVCALLSDWLPAT  253 (269)
T ss_dssp             HHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHC---T-TCCCTTCCHHHHHHHHHHHSSSCTTC
T ss_pred             HhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccC---C-cccCCCCHHHHHHHHHHHhCchhccC
Confidence            5   489999999998854311000    0000    000111111100   0 11136778999999999987532  3


Q ss_pred             CCcE-EEec
Q 030406          147 SGRY-LCAE  154 (178)
Q Consensus       147 ~~~~-~~~~  154 (178)
                      .|.. .+.+
T Consensus       254 tG~~i~vdG  262 (269)
T 2h7i_A          254 TGDIIYADG  262 (269)
T ss_dssp             CSEEEEEST
T ss_pred             cceEEEecC
Confidence            4544 4544

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.41  E-value=0.0046  Score=44.18  Aligned_cols=125  Identities=14%  Similarity=0.067  Sum_probs=77.2

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++..+..++...  +-.++|++||+++..+.                     .....|+.+|...+.+.+.++.
T Consensus       118 ~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~---------------------~~~~~Y~asKaal~~ltr~lA~  176 (256)
T 4fs3_A          118 QDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAV---------------------QNYNVMGVAKASLEANVKYLAL  176 (256)
T ss_dssp             HHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCC---------------------TTTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCc---------------------ccchhhHHHHHHHHHHHHHHHH
Confidence            467888888888777653  23589999996554321                     2346799999999998877655


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCcE-EEe
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGRY-LCA  153 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~-~~~  153 (178)
                      +   +|+++-.+.||.+--+.....  .......+......| .+    -+...+|+|++++.++...  -..|.. .+.
T Consensus       177 Ela~~gIrVN~V~PG~i~T~~~~~~--~~~~~~~~~~~~~~P-l~----R~g~peevA~~v~fL~Sd~a~~iTG~~i~VD  249 (256)
T 4fs3_A          177 DLGPDNIRVNAISAGPIRTLSAKGV--GGFNTILKEIKERAP-LK----RNVDQVEVGKTAAYLLSDLSSGVTGENIHVD  249 (256)
T ss_dssp             HHGGGTEEEEEEEECCCCSGGGTTC--TTHHHHHHHHHHHST-TS----SCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HhCccCeEEEEEecCCCCChhhhhc--cCCHHHHHHHHhcCC-CC----CCcCHHHHHHHHHHHhCchhcCccCCEEEEC
Confidence            4   478999999998865432221  111112222211111 11    2456899999999888543  234544 454


Q ss_pred             c
Q 030406          154 E  154 (178)
Q Consensus       154 ~  154 (178)
                      |
T Consensus       250 G  250 (256)
T 4fs3_A          250 S  250 (256)
T ss_dssp             T
T ss_pred             c
Confidence            4

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.27  E-value=0.0015  Score=46.49  Aligned_cols=125  Identities=14%  Similarity=0.025  Sum_probs=76.3

Q ss_pred             chhHHHHHHHHHHHHHh----CC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.|+..+.+++..    .+ --++|++||+.+..+.                     .....|+.||.....+.+.
T Consensus       107 ~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~---------------------~~~~~Y~asKaav~~ltr~  165 (247)
T 4hp8_A          107 MDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG---------------------IRVPSYTAAKHGVAGLTKL  165 (247)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC---------------------SSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC---------------------CCChHHHHHHHHHHHHHHH
Confidence            67899999888887542    23 4689999996554321                     1335799999999998777


Q ss_pred             HHHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCCcE-
Q 030406           77 EAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASGRY-  150 (178)
Q Consensus        77 ~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~-  150 (178)
                      .+.+.   |+++-.+-||.+--+-.... ... ....+......| .+    -+...+|+|.+++.++....  ..|.. 
T Consensus       166 lA~Ela~~gIrVNaV~PG~i~T~~~~~~-~~~-~~~~~~~~~~~P-lg----R~g~peeiA~~v~fLaSd~a~~iTG~~i  238 (247)
T 4hp8_A          166 LANEWAAKGINVNAIAPGYIETNNTEAL-RAD-AARNKAILERIP-AG----RWGHSEDIAGAAVFLSSAAADYVHGAIL  238 (247)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCSGGGHHH-HTS-HHHHHHHHTTCT-TS----SCBCTHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             HHHHHhhcCeEEEEEeeCCCCCcchhhc-ccC-HHHHHHHHhCCC-CC----CCcCHHHHHHHHHHHhCchhcCCcCCeE
Confidence            65544   78888999998854321100 000 111122222211 11    24568999999998885432  34533 


Q ss_pred             EEec
Q 030406          151 LCAE  154 (178)
Q Consensus       151 ~~~~  154 (178)
                      .+.|
T Consensus       239 ~VDG  242 (247)
T 4hp8_A          239 NVDG  242 (247)
T ss_dssp             EEST
T ss_pred             EECc
Confidence            4544

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=97.14  E-value=0.0011  Score=49.25  Aligned_cols=73  Identities=5%  Similarity=-0.082  Sum_probs=54.7

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCc-hHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKN-WYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.|+..+.+++...  .-.+||++||.++..+.                     .... .|+.||...+.+.+.++
T Consensus       143 ~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~---------------------~~~~~~Y~asKaal~~~~~~la  201 (329)
T 3lt0_A          143 LSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVV---------------------PGYGGGMSSAKAALESDTRVLA  201 (329)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC---------------------TTCTTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHhhCCeEEEEeCccccCCC---------------------CcchHHHHHHHHHHHHHHHHHH
Confidence            678999999999998753  11589999996443221                     1222 79999999998887665


Q ss_pred             Hh----cCCcEEEecCCceeC
Q 030406           79 VA----RGVDLVVVNPVLVLG   95 (178)
Q Consensus        79 ~~----~~~~~~i~R~~~v~G   95 (178)
                      .+    .|+.+..+.||.+-.
T Consensus       202 ~el~~~~gI~vn~v~PG~v~T  222 (329)
T 3lt0_A          202 YHLGRNYNIRINTISAGPLKS  222 (329)
T ss_dssp             HHHHHHHCCEEEEEEECCCCC
T ss_pred             HHhCCccCeEEEEEecceeec
Confidence            44    589999999998854

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=96.94  E-value=0.004  Score=44.61  Aligned_cols=126  Identities=11%  Similarity=0.073  Sum_probs=77.1

Q ss_pred             chhHHHHHHHHHHHHHh-----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE-----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~-----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.|+..+.+++..     .+-.++|++||..+..+.                     .....|+.+|.....+.+.
T Consensus       114 ~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~---------------------~~~~~Y~asKaal~~ltr~  172 (255)
T 4g81_D          114 IDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAAR---------------------PTVAPYTAAKGGIKMLTCS  172 (255)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBC---------------------TTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCC---------------------CCchhHHHHHHHHHHHHHH
Confidence            67899999888877642     344689999996554321                     2346799999999998777


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cE
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY  150 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~  150 (178)
                      .+.+   +|+++-.+.||.+..+-....  ..-..+........| .    .-+...+|+|++++.++...  -..| .+
T Consensus       173 lA~ela~~gIrVN~V~PG~i~T~~~~~~--~~~~~~~~~~~~~~P-l----~R~g~pediA~~v~fL~S~~a~~iTG~~i  245 (255)
T 4g81_D          173 MAAEWAQFNIQTNAIGPGYILTDMNTAL--IEDKQFDSWVKSSTP-S----QRWGRPEELIGTAIFLSSKASDYINGQII  245 (255)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCCGGGHHH--HTCHHHHHHHHHHST-T----CSCBCGGGGHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHhcccCeEEEEEeeCCCCCchhhcc--cCCHHHHHHHHhCCC-C----CCCcCHHHHHHHHHHHhCchhCCCcCCEE
Confidence            6554   478888999998864421110  000111122111111 1    12456899999999888543  2345 44


Q ss_pred             EEecC
Q 030406          151 LCAES  155 (178)
Q Consensus       151 ~~~~~  155 (178)
                      .+.|.
T Consensus       246 ~VDGG  250 (255)
T 4g81_D          246 YVDGG  250 (255)
T ss_dssp             EESTT
T ss_pred             EECCC
Confidence            45443

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.58  E-value=0.0056  Score=50.87  Aligned_cols=111  Identities=14%  Similarity=0.059  Sum_probs=73.5

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.|+.++.+++.. .. +||++||+++..+.                     .....|+.+|...+.+.++.. ..
T Consensus       639 ~~~nv~G~~~l~~~~~~-~l-~iV~~SS~ag~~g~---------------------~g~~~YaAaka~~~alA~~~~-~~  694 (795)
T 3slk_A          639 LRPKVDGARNLLELIDP-DV-ALVLFSSVSGVLGS---------------------GGQGNYAAANSFLDALAQQRQ-SR  694 (795)
T ss_dssp             HCCCCCHHHHHHHHSCT-TS-EEEEEEETHHHHTC---------------------SSCHHHHHHHHHHHHHHHHHH-HT
T ss_pred             HHHHHHHHHHHHHHHhh-CC-EEEEEccHHhcCCC---------------------CCCHHHHHHHHHHHHHHHHHH-Hc
Confidence            57899999999999843 34 89999997776542                     244679999998888877754 56


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCC
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSA  146 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  146 (178)
                      |+++..+-||.+-.+....   .........+.       ......+..++....+..++..+..
T Consensus       695 Gi~v~sI~pG~v~t~g~~~---~~~~~~~~~~~-------~~g~~~l~~~e~~~~~~~~l~~~~~  749 (795)
T 3slk_A          695 GLPTRSLAWGPWAEHGMAS---TLREAEQDRLA-------RSGLLPISTEEGLSQFDAACGGAHT  749 (795)
T ss_dssp             TCCEEEEEECCCSCCCHHH---HHHHHHHHHHH-------HTTBCCCCHHHHHHHHHHHHTSSCS
T ss_pred             CCeEEEEECCeECcchhhc---cccHHHHHHHH-------hcCCCCCCHHHHHHHHHHHHhCCCc
Confidence            9999999999875432110   00011111111       1223446778888888888876543

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=96.21  E-value=0.027  Score=50.62  Aligned_cols=109  Identities=9%  Similarity=0.022  Sum_probs=69.2

Q ss_pred             chhHHHHHHHHHHHHHhCC------CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHH-H
Q 030406            2 VEPAVIGTKNVIVAAAEAK------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKA-A   74 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~------~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~-~   74 (178)
                      +++|+.++.+++++++...      -.+||++||..+..+                       ....|+.+|...+.+ .
T Consensus       795 ~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g-----------------------g~~aYaASKAAL~~Ltt  851 (1887)
T 2uv8_A          795 MLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG-----------------------GDGMYSESKLSLETLFN  851 (1887)
T ss_dssp             HTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS-----------------------CBTTHHHHHHHGGGHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC-----------------------CCchHHHHHHHHHHHHH
Confidence            6789999999999884321      258999999644322                       224699999999998 5


Q ss_pred             HHHHHhcC--CcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           75 WEEAVARG--VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        75 ~~~~~~~~--~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.++.+.+  +.+..+.||++-+....... ....   ......    +   .-+...+|+|++++.++...
T Consensus       852 r~lA~ela~~IrVNaV~PG~V~tT~m~~~~-~~~~---~~~~~~----p---lr~~sPEEVA~avlfLaSd~  912 (1887)
T 2uv8_A          852 RWHSESWANQLTVCGAIIGWTRGTGLMSAN-NIIA---EGIEKM----G---VRTFSQKEMAFNLLGLLTPE  912 (1887)
T ss_dssp             HHHHSSCTTTEEEEEEEECCEECC-----C-CTTH---HHHHTT----S---CCCEEHHHHHHHHHGGGSHH
T ss_pred             HHHHHHhCCCeEEEEEEecccccccccccc-hhHH---HHHHhc----C---CCCCCHHHHHHHHHHHhCCC
Confidence            55554433  78888999999753321110 0111   111111    1   13447999999999988654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.08  E-value=0.016  Score=46.62  Aligned_cols=130  Identities=18%  Similarity=0.171  Sum_probs=83.8

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++.+++.    +.+-.+||++||.++.++.                     .....|+.||.....+.+.+
T Consensus       423 ~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~---------------------~~~~~Y~asKaal~~lt~~l  481 (604)
T 2et6_A          423 QQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGN---------------------FGQANYSSSKAGILGLSKTM  481 (604)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC---------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC---------------------CCChhHHHHHHHHHHHHHHH
Confidence            6789999988887775    3445689999996555431                     13357999999999987776


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC-CCC-cEEE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS-ASG-RYLC  152 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~-~~~~  152 (178)
                      +.+   +|+.+..+.|+ + ......    .   ...          .........+|++++++.++.... ..| .+.+
T Consensus       482 a~El~~~gIrVn~v~PG-~-~T~m~~----~---~~~----------~~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~v  542 (604)
T 2et6_A          482 AIEGAKNNIKVNIVAPH-A-ETAMTL----S---IMR----------EQDKNLYHADQVAPLLVYLGTDDVPVTGETFEI  542 (604)
T ss_dssp             HHHHGGGTEEEEEEEEC-C-CCCC--------------------------CCSSCGGGTHHHHHHTTSTTCCCCSCEEEE
T ss_pred             HHHhCccCeEEEEEcCC-C-CCcccc----c---cCc----------hhhccCCCHHHHHHHHHHHhCCccCCCCcEEEE
Confidence            554   47889999998 2 221110    0   000          011234578999999998886532 344 3333


Q ss_pred             ec------------------CccCHHHHHHHHHHhCC
Q 030406          153 AE------------------SVLHRGEVVEILAKFFP  171 (178)
Q Consensus       153 ~~------------------~~~s~~e~~~~i~~~~~  171 (178)
                      .+                  ..++..++.+...+...
T Consensus       543 dGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  579 (604)
T 2et6_A          543 GGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITD  579 (604)
T ss_dssp             ETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTC
T ss_pred             CCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhc
Confidence            22                  23688888888887663

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=95.62  E-value=0.021  Score=45.92  Aligned_cols=103  Identities=17%  Similarity=0.103  Sum_probs=67.8

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+..+.+++.    +.+-.+||++||.++.++.                     .....|+.+|.....+.+.+
T Consensus       119 ~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~---------------------~~~~~Y~asKaal~~lt~~l  177 (604)
T 2et6_A          119 IDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGN---------------------FGQANYASAKSALLGFAETL  177 (604)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC---------------------CCchHHHHHHHHHHHHHHHH
Confidence            6789999988887765    3344689999997665532                     13357999999999998876


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+   +|+.+..+.|+ + -..       ..    .   ...   ..........+|++.+++.++...
T Consensus       178 a~El~~~gIrVn~v~Pg-~-~T~-------m~----~---~~~---~~~~~~~~~pe~vA~~v~~L~s~~  228 (604)
T 2et6_A          178 AKEGAKYNIKANAIAPL-A-RSR-------MT----E---SIM---PPPMLEKLGPEKVAPLVLYLSSAE  228 (604)
T ss_dssp             HHHHGGGTEEEEEEEEC-C-CCH-------HH----H---TTS---CHHHHTTCSHHHHHHHHHHHTSSS
T ss_pred             HHHhCccCeEEEEEccC-C-cCc-------cc----c---ccC---ChhhhccCCHHHHHHHHHHHhCCc
Confidence            554   47888889996 2 110       00    0   000   000112357899999998888654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=95.04  E-value=0.067  Score=48.20  Aligned_cols=109  Identities=8%  Similarity=-0.041  Sum_probs=68.4

Q ss_pred             chhHHHHHHHHHHHHH--hC----CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA--EA----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW   75 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~--~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~   75 (178)
                      +++|+.++.+++.+++  ..    +..+||++||.++..+                       ....|+.+|...+.+..
T Consensus       770 l~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g-----------------------g~~aYaASKAAL~aLt~  826 (1878)
T 2uv9_A          770 MLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG-----------------------NDGLYSESKLALETLFN  826 (1878)
T ss_dssp             HTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS-----------------------CCSSHHHHHHHHTTHHH
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC-----------------------CchHHHHHHHHHHHHHH
Confidence            6789999999987743  21    2258999999644432                       12469999999999876


Q ss_pred             HHHHh-c--CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           76 EEAVA-R--GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        76 ~~~~~-~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      .+..+ .  ++++..+.||++-|......    ...........    +   .-+...+|++++++.++...
T Consensus       827 ~laAeEla~~IrVNaVaPG~V~gT~m~~~----~~~~~~~~~~~----p---lr~~sPeEVA~avlfLaSd~  887 (1878)
T 2uv9_A          827 RWYSESWGNYLTICGAVIGWTRGTGLMSA----NNLVAEGVEKL----G---VRTFSQQEMAFNLLGLMAPA  887 (1878)
T ss_dssp             HHHHSTTTTTEEEEEEEECCBCCTTSCSH----HHHTHHHHHTT----T---CCCBCHHHHHHHHHHHHSHH
T ss_pred             HHHHHHcCCCeEEEEEEecceecCccccc----chhhHHHHHhc----C---CCCCCHHHHHHHHHHHhCCc
Confidence            55433 1  27888899998863332111    01111111111    1   12347999999998887654

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=95.02  E-value=0.013  Score=51.64  Aligned_cols=109  Identities=8%  Similarity=-0.018  Sum_probs=66.9

Q ss_pred             chhHHHHHHHHHHHHHh--C----CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHH-
Q 030406            2 VEPAVIGTKNVIVAAAE--A----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAA-   74 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~--~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~-   74 (178)
                      +++|+.++.++++++++  .    +-.+||++||.++..+                       ....|+.+|...+.+. 
T Consensus       596 ~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G-----------------------g~saYaASKAAL~aLtt  652 (1688)
T 2pff_A          596 MLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG-----------------------GDGMYSESKLSLETLFN  652 (1688)
T ss_dssp             TTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS-----------------------CBTTHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC-----------------------CchHHHHHHHHHHHHHH
Confidence            67899999999998832  1    2248999999544321                       2246999999999984 


Q ss_pred             HHHHHhcC--CcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           75 WEEAVARG--VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        75 ~~~~~~~~--~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +..+.+.+  +.+..+.||.+-+....... ..          ..........-+...+|+|++++.++...
T Consensus       653 rsLAeEla~~IRVNaVaPG~V~TT~M~~~~-e~----------~~~~l~~iplR~~sPEEVA~aIlFLaSd~  713 (1688)
T 2pff_A          653 RWHSESWANQLTVCGAIIGWTRGTGLMSAN-NI----------IAEGIEKMGVRTFSQKEMAFNLLGLLTPE  713 (1688)
T ss_dssp             HTTTSSCTTTEECCCCCCCCCCCCSSSCTT-TT----------CSTTTSSSSCCCCCCCTTHHHHHHHTSTT
T ss_pred             HHHHHHcCCCeEEEEEEECcCcCCcccCCc-hH----------HHHHHHhCCCCCCCHHHHHHHHHHHhCCC
Confidence            33333222  66777889988653321110 00          00000011112347899999999988665

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=93.04  E-value=0.33  Score=37.03  Aligned_cols=75  Identities=12%  Similarity=-0.121  Sum_probs=48.3

Q ss_pred             hhHHHHHH-HHHHHHHhCC----CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            3 EPAVIGTK-NVIVAAAEAK----VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         3 ~~nv~~t~-~ll~~~~~~~----~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      ++|..++. .++.++....    -.++|.+||+++..+.                   +......|+.+|...+.+.+..
T Consensus       200 ~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~-------------------p~~~~~aY~AaKaal~~ltrsL  260 (405)
T 3zu3_A          200 AVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITH-------------------DIYWNGSIGAAKKDLDQKVLAI  260 (405)
T ss_dssp             HHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGT-------------------TTTTTSHHHHHHHHHHHHHHHH
T ss_pred             HhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcC-------------------CCccchHHHHHHHHHHHHHHHH
Confidence            45655554 4455543211    1479999996543321                   1112367999999999998776


Q ss_pred             HHh---c-CCcEEEecCCceeCC
Q 030406           78 AVA---R-GVDLVVVNPVLVLGP   96 (178)
Q Consensus        78 ~~~---~-~~~~~i~R~~~v~G~   96 (178)
                      +.+   . |+++-++.||.+--+
T Consensus       261 A~Ela~~~GIRVNaVaPG~i~T~  283 (405)
T 3zu3_A          261 RESLAAHGGGDARVSVLKAVVSQ  283 (405)
T ss_dssp             HHHHHTTTSCEEEEEECCCCCCH
T ss_pred             HHHhCcccCeEEEEEEeCCCcCc
Confidence            554   3 788999999988543

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=91.99  E-value=0.69  Score=35.46  Aligned_cols=37  Identities=14%  Similarity=-0.121  Sum_probs=29.7

Q ss_pred             CchHHHHHHHHHHHHHHHHHh----cCCcEEEecCCceeCC
Q 030406           60 KNWYCYGKAVAEKAAWEEAVA----RGVDLVVVNPVLVLGP   96 (178)
Q Consensus        60 ~~~Y~~sK~~~E~~~~~~~~~----~~~~~~i~R~~~v~G~   96 (178)
                      ...|+.+|...+.+.+..+.+    .|+.+.++.||.+--+
T Consensus       257 ~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~  297 (418)
T 4eue_A          257 EGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTK  297 (418)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence            378999999999887766544    5789999999988543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=91.94  E-value=0.35  Score=45.27  Aligned_cols=71  Identities=18%  Similarity=0.180  Sum_probs=54.3

Q ss_pred             CchhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            1 MVEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         1 ~~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      .+++|+.|+.++.+++...  ...+||++||+++..+.                     .....|+.+|...+.+.+.. 
T Consensus      1991 ~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~---------------------~g~~~Y~aaKaal~~l~~~r- 2048 (2512)
T 2vz8_A         1991 VSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGN---------------------AGQANYGFANSAMERICEKR- 2048 (2512)
T ss_dssp             CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTC---------------------TTCHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCC---------------------CCcHHHHHHHHHHHHHHHHH-
Confidence            3688999999998887652  34799999997665432                     13467999999999999864 


Q ss_pred             HhcCCcEEEecCCce
Q 030406           79 VARGVDLVVVNPVLV   93 (178)
Q Consensus        79 ~~~~~~~~i~R~~~v   93 (178)
                      +..|++...+..+.+
T Consensus      2049 r~~Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2049 RHDGLPGLAVQWGAI 2063 (2512)
T ss_dssp             HHTTSCCCEEEECCB
T ss_pred             HHCCCcEEEEEccCc
Confidence            455899888887755

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=91.32  E-value=0.39  Score=36.83  Aligned_cols=74  Identities=18%  Similarity=-0.135  Sum_probs=47.7

Q ss_pred             hHHHHHH-HHHHHHHhCC----CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            4 PAVIGTK-NVIVAAAEAK----VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         4 ~nv~~t~-~ll~~~~~~~----~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +|..++. .++.++....    -.++|.+||+++..+.                   +......|+.||...+.+.+..+
T Consensus       216 Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~-------------------p~~~~~aY~ASKaAl~~lTrsLA  276 (422)
T 3s8m_A          216 VMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITW-------------------PIYWHGALGKAKVDLDRTAQRLN  276 (422)
T ss_dssp             HHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGH-------------------HHHTSHHHHHHHHHHHHHHHHHH
T ss_pred             hhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccC-------------------CCccchHHHHHHHHHHHHHHHHH
Confidence            3444443 5555554322    2479999996443210                   11223689999999999887765


Q ss_pred             Hh---cCCcEEEecCCceeCC
Q 030406           79 VA---RGVDLVVVNPVLVLGP   96 (178)
Q Consensus        79 ~~---~~~~~~i~R~~~v~G~   96 (178)
                      .+   .|+++..+.||.+--+
T Consensus       277 ~Ela~~GIRVNaVaPG~i~T~  297 (422)
T 3s8m_A          277 ARLAKHGGGANVAVLKSVVTQ  297 (422)
T ss_dssp             HHHHTTTCEEEEEEECCCCCT
T ss_pred             HHhCccCEEEEEEEcCCCcCh
Confidence            54   4899999999988644

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=87.95  E-value=0.33  Score=35.91  Aligned_cols=84  Identities=13%  Similarity=0.010  Sum_probs=55.9

Q ss_pred             chhHHHHHHHHHHHHHhCC-CC-EEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAK-VR-RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~-~~-~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      ++.|+.+++++++++++.+ .+ +||++|....+.-.-       ..+..+     -..+...++.+++...++...+++
T Consensus       105 ~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~-------~~~~~~-----~~p~~~v~g~t~Ld~~r~~~~la~  172 (329)
T 1b8p_A          105 LEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYI-------AMKSAP-----SLPAKNFTAMLRLDHNRALSQIAA  172 (329)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHH-------HHHTCT-----TSCGGGEEECCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHH-------HHHHcC-----CCCHHHEEEeecHHHHHHHHHHHH
Confidence            4689999999999999973 55 899988742111000       001000     001234588888888998888888


Q ss_pred             hcCCcEEEecCCceeCCC
Q 030406           80 ARGVDLVVVNPVLVLGPL   97 (178)
Q Consensus        80 ~~~~~~~i~R~~~v~G~~   97 (178)
                      ..|++..-++...|+|.+
T Consensus       173 ~lgv~~~~v~~~~v~G~H  190 (329)
T 1b8p_A          173 KTGKPVSSIEKLFVWGNH  190 (329)
T ss_dssp             HHTCCGGGEESCEEEBCS
T ss_pred             HhCcCHHHceEEEEEecc
Confidence            888887777777778854

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	178
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	3e-14
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	8e-12
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-11
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-09
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	2e-09
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-07
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	7e-05
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	9e-05
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-04

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.0 bits (163), Expect = 3e-14
 Identities = 37/174 (21%), Positives = 63/174 (36%), Gaps = 10/174 (5%)

Query: 1   MVEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 60
            ++   IGT N++  A     R ++  S+   VY DP   P     E  W  +      +
Sbjct: 88  TLKTNTIGTLNMLGLAKRVGAR-LLLAST-SEVYGDPEVHP---QSEDYWGHVNPI-GPR 141

Query: 61  NWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASI-IHILKYLNGSAKT 119
             Y  GK VAE   +      GV++ V       GP +       +   IL+ L G   T
Sbjct: 142 ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLT 201

Query: 120 YANS---VQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFF 170
              S    +A+ +V D+    + +  +  +S   L         E  +++    
Sbjct: 202 VYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLV 255

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 60.2 bits (144), Expect = 8e-12
 Identities = 42/196 (21%), Positives = 63/196 (32%), Gaps = 18/196 (9%)

Query: 1   MVEPAVIGTKNVI-VAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFC--- 56
           +V PA+ GT N +  AAA   V+R V TSS  +  +         +DE  W+        
Sbjct: 103 VVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAK 162

Query: 57  -------KNTKNWYCYGKAVAEKAAWEE--AVARGVDLVVVNPVLVLGPLLQSTVNASII 107
                  + +   Y   K  AE AAW+          L  V P   +G +      +   
Sbjct: 163 TLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGST 222

Query: 108 H--ILKYLNGSAKTYANSVQA--YVHVRDVALAHILVYETPSASGRY-LCAESVLHRGEV 162
              ++   NG        +    YV   D+ L H+     P    R             V
Sbjct: 223 SGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTV 282

Query: 163 VEILAKFFPEYPIPTK 178
           +    K +P    P  
Sbjct: 283 LATFRKLYPSKTFPAD 298

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 59.8 bits (144), Expect = 1e-11
 Identities = 32/147 (21%), Positives = 49/147 (33%), Gaps = 14/147 (9%)

Query: 7   IGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYG 66
            GT+ ++  A +A V RVV   S   VY   +        ES            + Y   
Sbjct: 105 QGTQTLLQCAVDAGVGRVVH-VSTNQVYGSIDSGS---WTESSP------LEPNSPYAAS 154

Query: 67  KAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY---ANS 123
           KA ++  A       G+D+ +       GP  Q       + +   L+G          +
Sbjct: 155 KAGSDLVARAYHRTYGLDVRITRCCNNYGP-YQHPEKLIPLFVTNLLDGGTLPLYGDGAN 213

Query: 124 VQAYVHVRDVALAHILVYETPSASGRY 150
           V+ +VH  D      LV     A   Y
Sbjct: 214 VREWVHTDDHCRGIALVLAGGRAGEIY 240

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 53.2 bits (127), Expect = 2e-09
 Identities = 28/158 (17%), Positives = 49/158 (31%), Gaps = 15/158 (9%)

Query: 6   VIGTKNVIVAAAE---------AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFC 56
           ++GT  ++  A +             R    S+   VY D     +     +     E  
Sbjct: 101 IVGTYALLEVARKYWSALGEDKKNNFRFHHIST-DEVYGDLPHPDEVENSVTLPLFTETT 159

Query: 57  K-NTKNWYCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNG 115
                + Y   KA ++          G+  +V N     GP          + IL  L G
Sbjct: 160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGP-YHFPEKLIPLVILNALEG 218

Query: 116 SAKTY---ANSVQAYVHVRDVALAHILVYETPSASGRY 150
                    + ++ +++V D A A  +V     A   Y
Sbjct: 219 KPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETY 256

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 53.3 bits (127), Expect = 2e-09
 Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 5/91 (5%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCY 65
           ++   N+I AA +  V +++F  S   +Y    + P   + ES        + T   Y  
Sbjct: 83  MMIESNIIHAAHQNDVNKLLFLGS-SCIYPKLAKQP---MAESELLQ-GTLEPTNEPYAI 137

Query: 66  GKAVAEKAAWEEAVARGVDLVVVNPVLVLGP 96
            K    K         G D   V P  + GP
Sbjct: 138 AKIAGIKLCESYNRQYGRDYRSVMPTNLYGP 168

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 47.1 bits (111), Expect = 2e-07
 Identities = 20/150 (13%), Positives = 39/150 (26%), Gaps = 19/150 (12%)

Query: 6   VIGTKNVIVAAAEAKVR---RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNW 62
            +GT  ++ A     +    R    S+   +Y      P     E+           ++ 
Sbjct: 106 AMGTLRLLEAIRFLGLEKKTRFYQAST-SELYGLVQEIP---QKETTP------FYPRSP 155

Query: 63  YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASII--HILKYLNGSAKTY 120
           Y   K  A         + G+            P    T     I   I     G     
Sbjct: 156 YAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCL 215

Query: 121 A----NSVQAYVHVRDVALAHILVYETPSA 146
                +S++ + H +D      ++ +    
Sbjct: 216 YLGNMDSLRDWGHAKDYVKMQWMMLQQEQP 245

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (92), Expect = 7e-05
 Identities = 13/94 (13%), Positives = 23/94 (24%), Gaps = 13/94 (13%)

Query: 6   VIGTKNVIVAAAEAKVR---RVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNW 62
            +GT  ++ A     +    +    S+   +Y      P     E            ++ 
Sbjct: 107 GVGTLRLLDAVKTCGLINSVKFYQAST-SELYGKVQEIP---QKE------TTPFYPRSP 156

Query: 63  YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGP 96
           Y   K  A         A  +  V         P
Sbjct: 157 YGAAKLYAYWIVVNFREAYNLFAVNGILFNHESP 190

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.5 bits (91), Expect = 9e-05
 Identities = 17/168 (10%), Positives = 51/168 (30%), Gaps = 10/168 (5%)

Query: 9   TKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKA 68
           + N+I AA    ++R  + SS             +V   S      +    ++ +   K 
Sbjct: 111 SFNMIEAARINGIKRFFYASSACIYPEFKQLETTNV---SLKESDAWPAEPQDAFGLEKL 167

Query: 69  VAEKAAWEEAVARGVDLVVVNPVLVLGP-------LLQSTVNASIIHILKYLNGSAKTYA 121
             E+         G++  +     + GP         ++                     
Sbjct: 168 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDG 227

Query: 122 NSVQAYVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKF 169
              +++  + +     + + ++       + ++ ++   E+ E++  F
Sbjct: 228 LQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSF 275

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 37.7 bits (86), Expect = 4e-04
 Identities = 32/180 (17%), Positives = 52/180 (28%), Gaps = 10/180 (5%)

Query: 6   VIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDL---EFCKNTKNW 62
            IGT  ++ AA +  +R      S   VY D     D         +    E   N  + 
Sbjct: 101 FIGTYTLLEAARKYDIRF--HHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSP 158

Query: 63  YCYGKAVAEKAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYAN 122
           Y   KA ++        + GV   + N     GP  Q         I   L G       
Sbjct: 159 YSSTKAASDLIVKAWVRSFGVKATISNCSNNYGP-YQHIEKFIPRQITNILAGIKPKLYG 217

Query: 123 SVQA---YVHVRDVALAHILVYETPSASGRYLCAESVLHRG-EVVEILAKFFPEYPIPTK 178
             +    ++H  D +     +         YL          EV+E++ +   +      
Sbjct: 218 EGKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYD 277

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	178
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.96
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.96
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.95
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.95
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.93
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.93
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.93
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.92
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.92
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.92
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.91
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.89
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.88
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.88
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.86
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.86
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.86
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.84
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.81
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.73
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.71
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.67
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.63
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.6
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.57
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.55
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.48
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.41
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.38
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.07
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	98.34
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	98.14
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	98.11
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	98.09
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	98.07
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	98.02
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	98.01
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	97.96
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	97.91
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.89
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.87
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.86
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.85
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.83
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.82
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	97.79
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.78
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.77
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.76
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.75
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.73
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.7
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.66
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.65
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.64
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.62
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.59
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.58
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.58
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.56
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.56
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.55
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	97.54
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.53
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.52
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.49
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.46
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.44
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.42
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.41
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.4
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.4
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	97.35
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.35
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.32
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	97.27
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.26
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.21
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.17
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.01
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.98
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	96.95
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	96.94
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	96.89
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.89
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.88
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	96.82
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.43
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.36
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.34
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	96.33
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	96.14
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	94.06
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	93.06
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	91.64
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	88.61

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.96  E-value=2.4e-29  Score=186.06  Aligned_cols=158  Identities=25%  Similarity=0.266  Sum_probs=134.2

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.||.+++++|++.++++|||+|| +++|+.....+   ++|++      +..|.+.|+.+|..+|.+++.+.+++
T Consensus       100 ~~~N~~gt~~ll~~~~~~~~~~~I~~Ss-~~~yg~~~~~~---~~E~~------~~~p~~~Y~~sK~~~E~~~~~~~~~~  169 (322)
T d1r6da_         100 TETNVQGTQTLLQCAVDAGVGRVVHVST-NQVYGSIDSGS---WTESS------PLEPNSPYAASKAGSDLVARAYHRTY  169 (322)
T ss_dssp             HHHHTHHHHHHHHHHHHTTCCEEEEEEE-GGGGCCCSSSC---BCTTS------CCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHcCCceEEEeec-ceeecCCCCCC---CCCCC------CCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999 78998766555   88887      56788999999999999999999999


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHH-HHHHhCCcc-cc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecCc
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHI-LKYLNGSAK-TY--ANSVQAYVHVRDVALAHILVYETPSASGRYLC-AESV  156 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~-~~~~~~~~~-~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~~  156 (178)
                      +++++++||+++|||+....  ..+..+ .++..++.. .+  |++.++|+|++|+|+++..+++.+..++.||+ ++++
T Consensus       170 ~~~~~~lR~~~vyGp~~~~~--~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~~~~~~ni~~~~~  247 (322)
T d1r6da_         170 GLDVRITRCCNNYGPYQHPE--KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLE  247 (322)
T ss_dssp             CCCEEEEEECEEECTTCCTT--SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCE
T ss_pred             CCCEEEEEeeeEECcCCCcC--cHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCCCCCeeEEeeccc
Confidence            99999999999999975543  344444 455556553 23  57899999999999999999999888889986 6789


Q ss_pred             cCHHHHHHHHHHhCC
Q 030406          157 LHRGEVVEILAKFFP  171 (178)
Q Consensus       157 ~s~~e~~~~i~~~~~  171 (178)
                      +++.|+++.+.+.++
T Consensus       248 ~s~~e~~~~i~~~~~  262 (322)
T d1r6da_         248 LTNRELTGILLDSLG  262 (322)
T ss_dssp             EEHHHHHHHHHHHHT
T ss_pred             chhHHHHHHHHHHhC
Confidence            999999999999874

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=2.6e-28  Score=182.89  Aligned_cols=159  Identities=14%  Similarity=0.073  Sum_probs=129.2

Q ss_pred             chhHHHHHHHHHHHHHhCCC---CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKV---RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~---~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.||.|||++|++.++   +||||+|| +++||.+...+   ++|++      +..|.+.|+.||+.+|.+++.+.
T Consensus       102 ~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS-~~vYG~~~~~~---~~E~~------~~~P~~~Y~~sK~~~E~~~~~~~  171 (357)
T d1db3a_         102 ADVDAMGTLRLLEAIRFLGLEKKTRFYQAST-SELYGLVQEIP---QKETT------PFYPRSPYAVAKLYAYWITVNYR  171 (357)
T ss_dssp             HHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE-GGGGTTCCSSS---BCTTS------CCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCcEEEEEEc-hhhhCCCCCCC---cCCCC------CCCCCChHHHHHHHHHHHHHHHH
Confidence            57899999999999998754   47999999 78998765555   89987      45788999999999999999999


Q ss_pred             HhcCCcEEEecCCceeCCCCCCCCh--hhHHHHHHHHhCCccc----cCCCCcccccHHHHHHHHHHhhcCCCCCCcEEE
Q 030406           79 VARGVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAKT----YANSVQAYVHVRDVALAHILVYETPSASGRYLC  152 (178)
Q Consensus        79 ~~~~~~~~i~R~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~----~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~  152 (178)
                      ++++++++++||+++|||+......  .....+.....+....    .|++.++|+|++|+++++..+++.+ .++.||+
T Consensus       172 ~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~-~~~~yni  250 (357)
T d1db3a_         172 ESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQE-QPEDFVI  250 (357)
T ss_dssp             HHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSS-SCCCEEE
T ss_pred             HHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHhCC-CCCeEEE
Confidence            9999999999999999997544322  2233444555555432    2567899999999999999999875 4568876


Q ss_pred             -ecCccCHHHHHHHHHHhCC
Q 030406          153 -AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       153 -~~~~~s~~e~~~~i~~~~~  171 (178)
                       +++++|++|+++.+.+.++
T Consensus       251 ~sg~~~s~~~~~~~~~~~~g  270 (357)
T d1db3a_         251 ATGVQYSVRQFVEMAAAQLG  270 (357)
T ss_dssp             CCCCCEEHHHHHHHHHHTTT
T ss_pred             CCCCceehHHHHHHHHHHhC
Confidence             6789999999999999874

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=9.9e-28  Score=176.71  Aligned_cols=163  Identities=22%  Similarity=0.327  Sum_probs=132.3

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.|+.+|+++|++.++ ++||+|| .++|+.....+   ++|+.+.+. .+..|.+.|+.+|.++|.+++.+.+++
T Consensus        89 ~~~Nv~g~~~ll~~~~~~~~-k~I~~SS-~~vy~~~~~~~---~~e~~~~~~-~~~~p~~~Y~~sK~~~E~~~~~~~~~~  162 (312)
T d2b69a1          89 LKTNTIGTLNMLGLAKRVGA-RLLLAST-SEVYGDPEVHP---QSEDYWGHV-NPIGPRACYDEGKRVAETMCYAYMKQE  162 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHTC-EEEEEEE-GGGGBSCSSSS---BCTTCCCBC-CSSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCC-cEEEEEC-hheecCCCCCC---CCccccCCC-CCCCCccHHHHHHHHHHHHHHHHHHHh
Confidence            57899999999999999886 7999999 68898766555   677654332 245788999999999999999999999


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHH-HHHHHHhCCccc-c--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-ecCc
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASII-HILKYLNGSAKT-Y--ANSVQAYVHVRDVALAHILVYETPSASGRYLC-AESV  156 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~~  156 (178)
                      |++++++||++||||+........+. .+.+.+.|+... +  |.+.++|+|++|+++++..+++.. .++.||+ ++++
T Consensus       163 ~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~-~~~~~n~~~~~~  241 (312)
T d2b69a1         163 GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN-VSSPVNLGNPEE  241 (312)
T ss_dssp             CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS-CCSCEEESCCCE
T ss_pred             CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhc-cCCceEecCCcc
Confidence            99999999999999986654333443 445666776643 2  567899999999999999988765 4567876 6789


Q ss_pred             cCHHHHHHHHHHhCC
Q 030406          157 LHRGEVVEILAKFFP  171 (178)
Q Consensus       157 ~s~~e~~~~i~~~~~  171 (178)
                      +++.++++.+++.++
T Consensus       242 ~~~~~~~~~i~~~~~  256 (312)
T d2b69a1         242 HTILEFAQLIKNLVG  256 (312)
T ss_dssp             EEHHHHHHHHHHHHT
T ss_pred             cchhhHHHHHHHHhC
Confidence            999999999999874

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=5.9e-27  Score=174.34  Aligned_cols=160  Identities=17%  Similarity=0.135  Sum_probs=131.5

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.||.+|+++|++.+++++||+|| .++||.....+   ++|++      +..|.+.|+.+|.++|++++.+.+++
T Consensus       115 ~~~Nv~gt~~ll~~~~~~~~~~~i~~SS-~~vyg~~~~~~---~~E~~------~~~p~~~Y~~sK~~~E~~~~~~~~~~  184 (341)
T d1sb8a_         115 NATNIDGFLNMLIAARDAKVQSFTYAAS-SSTYGDHPGLP---KVEDT------IGKPLSPYAVTKYVNELYADVFSRCY  184 (341)
T ss_dssp             HHHHTHHHHHHHHHHHHTTCSEEEEEEE-GGGGTTCCCSS---BCTTC------CCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             hheeehhHHHHHHHHHhcCCceEEEccc-ceeeCCCCCCC---ccCCC------CCCCCCcchHHHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999 78998765555   88987      55789999999999999999999999


Q ss_pred             CCcEEEecCCceeCCCCCCCCh--hhHH-HHHHHHhCCcc-cc--CCCCcccccHHHHHHHHHHhhcCCC--CCCcEEE-
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVN--ASII-HILKYLNGSAK-TY--ANSVQAYVHVRDVALAHILVYETPS--ASGRYLC-  152 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~--~~~~-~~~~~~~~~~~-~~--~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~-  152 (178)
                      +++++++||+++||++..+...  ..+. .+..++.|++. .+  |.+.++|+|++|++.++..++....  .++.|++ 
T Consensus       185 ~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~~~~~~  264 (341)
T d1sb8a_         185 GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIA  264 (341)
T ss_dssp             CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEES
T ss_pred             CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhccccccceeeeec
Confidence            9999999999999987654322  2343 34466667653 33  5678999999999999999887653  3448876 


Q ss_pred             ecCccCHHHHHHHHHHhCC
Q 030406          153 AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       153 ~~~~~s~~e~~~~i~~~~~  171 (178)
                      +++.+|++|+++.+++.++
T Consensus       265 ~~~~~si~~i~~~i~~~~~  283 (341)
T d1sb8a_         265 VGGRTSLNQLFFALRDGLA  283 (341)
T ss_dssp             CSCCEEHHHHHHHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHhc
Confidence            5578999999999998764

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.93  E-value=6.5e-26  Score=170.04  Aligned_cols=166  Identities=19%  Similarity=0.144  Sum_probs=127.6

Q ss_pred             chhHHHHHHHHHHHHHhCC---------CCEEEEeccccccccCCCCCCCCccCCCCCC-chhhhcccCchHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAK---------VRRVVFTSSIGAVYMDPNRSPDDVVDESCWS-DLEFCKNTKNWYCYGKAVAE   71 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~---------~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~-~~~~~~~~~~~Y~~sK~~~E   71 (178)
                      +++|+.||.+++++|++.+         +++|||+|| .++||.....+...-.+..+. .+..+..|.+.|+.+|+++|
T Consensus        97 ~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS-~~vyg~~~~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E  175 (361)
T d1kewa_          97 IETNIVGTYALLEVARKYWSALGEDKKNNFRFHHIST-DEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSD  175 (361)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEE-GGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEecc-ceeeCCCccCCccccccCCCCcccCCCCCCCCHHHHHHHHHH
Confidence            5789999999999998753         469999999 789986644321101111111 11224578899999999999


Q ss_pred             HHHHHHHHhcCCcEEEecCCceeCCCCCCCChhhHH-HHHHHHhCCccc---cCCCCcccccHHHHHHHHHHhhcCCCCC
Q 030406           72 KAAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASII-HILKYLNGSAKT---YANSVQAYVHVRDVALAHILVYETPSAS  147 (178)
Q Consensus        72 ~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~~~~~~  147 (178)
                      .+++.+.++++++++++||++||||+....  ..+. .+.++..|++..   .|++.++|+|++|+|+++..+++.+..+
T Consensus       176 ~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~--~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~~~  253 (361)
T d1kewa_         176 HLVRAWRRTYGLPTIVTNCSNNYGPYHFPE--KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAG  253 (361)
T ss_dssp             HHHHHHHHHHCCCEEEEEECEEESTTCCTT--SHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCTT
T ss_pred             HHHHHHHHHhCCCEEEEecCceECcCCCcC--cHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhcCCCC
Confidence            999999999999999999999999976542  2333 344566676532   3578999999999999999999988777


Q ss_pred             CcEEE-ecCccCHHHHHHHHHHhC
Q 030406          148 GRYLC-AESVLHRGEVVEILAKFF  170 (178)
Q Consensus       148 ~~~~~-~~~~~s~~e~~~~i~~~~  170 (178)
                      +.||+ +++++++.|+++.+.+.+
T Consensus       254 ~~~Ni~s~~~~s~~~~~~~i~~~~  277 (361)
T d1kewa_         254 ETYNIGGHNEKKNLDVVFTICDLL  277 (361)
T ss_dssp             CEEEECCCCEEEHHHHHHHHHHHH
T ss_pred             CeEEECCCCCcchHHHHhHhhhhc
Confidence            89987 567899999999998754

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.93  E-value=5.8e-25  Score=163.62  Aligned_cols=176  Identities=24%  Similarity=0.324  Sum_probs=132.4

Q ss_pred             chhHHHHHHHHHHHHHhC-CCCEEEEeccccccccCCCCCCCCccCCCCCCch----------hhhcccCchHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA-KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDL----------EFCKNTKNWYCYGKAVA   70 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~----------~~~~~~~~~Y~~sK~~~   70 (178)
                      ++.|+.||.+++++|++. ++++|||+||++++++..........+|+.|...          ..+..|.+.|+.+|..+
T Consensus       104 ~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~  183 (342)
T d1y1pa1         104 VTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEA  183 (342)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHH
T ss_pred             ccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCCCCCcCcccchhHhH
Confidence            467999999999999986 6999999999655554443333333555554321          22446778899999999


Q ss_pred             HHHHHHHHHhcC--CcEEEecCCceeCCCCCCCCh--hhHHHHHHHHhCCccc--cCCCCcccccHHHHHHHHHHhhcCC
Q 030406           71 EKAAWEEAVARG--VDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAKT--YANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        71 E~~~~~~~~~~~--~~~~i~R~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      |++++.|.++++  ++++++||+.+|||...+...  .....+...+.+....  .+.+.++|+|++|+|++++.+++.+
T Consensus       184 E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~  263 (342)
T d1y1pa1         184 ELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLP  263 (342)
T ss_dssp             HHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCT
T ss_pred             HHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcCc
Confidence            999999987764  678889999999986443222  2334455556665533  3567889999999999999999998


Q ss_pred             CCCCcE-EEecCccCHHHHHHHHHHhCCCCCCCC
Q 030406          145 SASGRY-LCAESVLHRGEVVEILAKFFPEYPIPT  177 (178)
Q Consensus       145 ~~~~~~-~~~~~~~s~~e~~~~i~~~~~~~~~p~  177 (178)
                      ...+.| +++++++|++|+++.+++.+|+..+|.
T Consensus       264 ~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~  297 (342)
T d1y1pa1         264 QIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPA  297 (342)
T ss_dssp             TCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCC
T ss_pred             cccceEEEEcCCceEHHHHHHHHHHHcCCCcCCc
Confidence            887755 567789999999999999998877664

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.2e-24  Score=161.88  Aligned_cols=161  Identities=14%  Similarity=0.034  Sum_probs=125.4

Q ss_pred             chhHHHHHHHHHHHHHhCCC---CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKV---RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~---~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.||.+++++|+++++   ++|||+|| .++||.....+   ++|++      +..|.+.|+.||+++|++++.+.
T Consensus       103 ~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS-~~vyg~~~~~~---~~E~~------~~~P~~~Yg~sK~~aE~~~~~~~  172 (347)
T d1t2aa_         103 ADVDGVGTLRLLDAVKTCGLINSVKFYQAST-SELYGKVQEIP---QKETT------PFYPRSPYGAAKLYAYWIVVNFR  172 (347)
T ss_dssp             HHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE-GGGTCSCSSSS---BCTTS------CCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHcCCCCCcEEEEecc-hheecCCCCCC---CCCCC------CCCCCCHHHHHHHHHHHHHHHHH
Confidence            47899999999999998764   58999999 78998655544   88987      55788999999999999999999


Q ss_pred             HhcCCcEEEecCCceeCCCCCCCCh--hhHHHHHHHHhCCc--ccc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE
Q 030406           79 VARGVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSA--KTY--ANSVQAYVHVRDVALAHILVYETPSASGRYLC  152 (178)
Q Consensus        79 ~~~~~~~~i~R~~~v~G~~~~~~~~--~~~~~~~~~~~~~~--~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~  152 (178)
                      ++++++++++||+++|||+......  .....+.....+..  ...  |++.++|+|++|+++++..+++.......+..
T Consensus       173 ~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~~~  252 (347)
T d1t2aa_         173 EAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIA  252 (347)
T ss_dssp             HHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSSCCCEEEC
T ss_pred             HHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhcCCCccceec
Confidence            9999999999999999987544322  12223333333433  222  56789999999999999999988754433345


Q ss_pred             ecCccCHHHHHHHHHHhCCC
Q 030406          153 AESVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       153 ~~~~~s~~e~~~~i~~~~~~  172 (178)
                      .+...++++....+...+.+
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~  272 (347)
T d1t2aa_         253 TGEVHSVREFVEKSFLHIGK  272 (347)
T ss_dssp             CSCCEEHHHHHHHHHHHTTC
T ss_pred             cccccccchhhhhhhhhhcc
Confidence            67788999999888776643

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=5.5e-25  Score=162.11  Aligned_cols=159  Identities=11%  Similarity=0.027  Sum_probs=127.0

Q ss_pred             chhHHHHHHHHHHHHHhCCC-CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      ++.|+.||.+++++|++.++ ++|+++|| +++|+.....+   .+|++      +..|.+.|+.+|.++|+++..+..+
T Consensus        96 ~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss-~~~~~~~~~~~---~~E~~------~~~p~~~Y~~sK~~~E~~~~~~~~~  165 (321)
T d1rpna_          96 GVVDGLGVTHLLEAIRQFSPETRFYQAST-SEMFGLIQAER---QDENT------PFYPRSPYGVAKLYGHWITVNYRES  165 (321)
T ss_dssp             HHHHTHHHHHHHHHHHHHCTTSEEEEEEE-GGGGCSCSSSS---BCTTS------CCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             HhhhhhchHHHHHHHHHhCCCcccccccc-hhhcCcccCCC---CCCCC------CccccChhHHHHHHHHHHHHHHHhh
Confidence            56799999999999999875 57777777 78887665544   77876      5578899999999999999999999


Q ss_pred             cCCcEEEecCCceeCCCCCCCCh--hhHHHHHHHHhCCccc--c--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-e
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAKT--Y--ANSVQAYVHVRDVALAHILVYETPSASGRYLC-A  153 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~--~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~  153 (178)
                      ++++++++||+++|||.......  .....+.+...++.+.  +  |++.++|+|++|+|+++..+++.+.. +.|++ +
T Consensus       166 ~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~~-~~~ni~~  244 (321)
T d1rpna_         166 FGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDKA-DDYVVAT  244 (321)
T ss_dssp             HCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSSC-CCEEECC
T ss_pred             cCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCCc-CCceecc
Confidence            99999999999999997544321  2234455555555432  2  56789999999999999999998754 45654 6


Q ss_pred             cCccCHHHHHHHHHHhCC
Q 030406          154 ESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       154 ~~~~s~~e~~~~i~~~~~  171 (178)
                      ++..|+.++++.+.+.++
T Consensus       245 ~~~~s~~~~~~~~~~~~~  262 (321)
T d1rpna_         245 GVTTTVRDMCQIAFEHVG  262 (321)
T ss_dssp             SCEEEHHHHHHHHHHTTT
T ss_pred             cccceehhhhHHHHHHhC
Confidence            789999999999999874

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.92  E-value=2.2e-24  Score=160.62  Aligned_cols=162  Identities=20%  Similarity=0.247  Sum_probs=127.8

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCC---------CCCCCccCCCCCCchhhhcccCchHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPN---------RSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEK   72 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~---------~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~   72 (178)
                      +++|+.|+.+++++|++.+. ++|++|| +++|+...         ..+...++|.+      +..|.+.|+.+|+++|.
T Consensus        97 ~~~N~~g~~nll~~~~~~~~-k~i~~ss-~~vyg~~~~~~~~~~~~~~~~~~~~e~~------~~~p~s~Y~~sK~~~E~  168 (346)
T d1oc2a_          97 IHTNFIGTYTLLEAARKYDI-RFHHVST-DEVYGDLPLREDLPGHGEGPGEKFTAET------NYNPSSPYSSTKAASDL  168 (346)
T ss_dssp             HHHHTHHHHHHHHHHHHHTC-EEEEEEE-GGGGCCBCCGGGSTTTTCSTTSSBCTTS------CCCCCSHHHHHHHHHHH
T ss_pred             eeeehHhHHhhhhhhccccc-ccccccc-ceEecccCccccccccccCcccccccCC------CCCCCCHHHHHHHHHHH
Confidence            57899999999999999884 7899999 68886421         11122244443      55788999999999999


Q ss_pred             HHHHHHHhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCcc-cc--CCCCcccccHHHHHHHHHHhhcCCCCCCc
Q 030406           73 AAWEEAVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK-TY--ANSVQAYVHVRDVALAHILVYETPSASGR  149 (178)
Q Consensus        73 ~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~  149 (178)
                      +++.+.++++++++++||+++|||+.... ......+.....+... .+  |++.++|+|++|++++++.+.+.+..++.
T Consensus       169 ~~~~~~~~~~i~~~ilR~~~vyGp~~~~~-~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~  247 (346)
T d1oc2a_         169 IVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRMGET  247 (346)
T ss_dssp             HHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCCTTCE
T ss_pred             HHHHHHHHcCCCEEEEeecceeCCCCCcc-chhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHhhcccCcc
Confidence            99999999999999999999999875433 2233344455566553 33  67899999999999999999998888887


Q ss_pred             EE-EecCccCHHHHHHHHHHhCCC
Q 030406          150 YL-CAESVLHRGEVVEILAKFFPE  172 (178)
Q Consensus       150 ~~-~~~~~~s~~e~~~~i~~~~~~  172 (178)
                      |+ ++++..++.++++.+.+.++.
T Consensus       248 ~~~~~~~~~~~~~~~~~i~~~~~~  271 (346)
T d1oc2a_         248 YLIGADGEKNNKEVLELILEKMGQ  271 (346)
T ss_dssp             EEECCSCEEEHHHHHHHHHHHTTC
T ss_pred             ccccccccccchHHHHHHHHHhCC
Confidence            76 578899999999999998854

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.92  E-value=5.2e-24  Score=159.46  Aligned_cols=165  Identities=11%  Similarity=0.116  Sum_probs=126.0

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCC-CchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCW-SDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~-~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +..|+.+|.+++++|+++++++|||+|| .++|+.....+   .+|... .....+..|.+.|+.+|.++|++++.+.++
T Consensus       104 ~~~n~~gt~~ll~~~~~~~vk~~i~~SS-~~~~~~~~~~~---~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~  179 (363)
T d2c5aa1         104 MYNNTMISFNMIEAARINGIKRFFYASS-ACIYPEFKQLE---TTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKD  179 (363)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCSEEEEEEE-GGGSCGGGSSS---SSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccchhhHHHHhHHhhCccccccccc-ccccccccccc---ccccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999 68887554433   334332 223345678999999999999999999999


Q ss_pred             cCCcEEEecCCceeCCCCCCCCh---hhHHHHHHH-HhCCc-ccc--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTVN---ASIIHILKY-LNGSA-KTY--ANSVQAYVHVRDVALAHILVYETPSASGRYLC-  152 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~~---~~~~~~~~~-~~~~~-~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-  152 (178)
                      +|++++++||+++||++......   ......... ..... ..+  |.+.++|+|++|+++++..+++.+ .++.||+ 
T Consensus       180 ~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~-~~~~~ni~  258 (363)
T d2c5aa1         180 FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-FREPVNIG  258 (363)
T ss_dssp             HCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS-CCSCEEEC
T ss_pred             hCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHhCC-CCCeEEEe
Confidence            99999999999999987543211   111222222 22222 222  567999999999999999998865 5668876 


Q ss_pred             ecCccCHHHHHHHHHHhCC
Q 030406          153 AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       153 ~~~~~s~~e~~~~i~~~~~  171 (178)
                      +++++|+.|+++.+++.+.
T Consensus       259 ~~~~~s~~~l~~~i~~~~g  277 (363)
T d2c5aa1         259 SDEMVSMNEMAEMVLSFEE  277 (363)
T ss_dssp             CCCCEEHHHHHHHHHHTTT
T ss_pred             cCCcccHHHHHHHHHHHhC
Confidence            7789999999999999874

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=1.4e-23  Score=154.25  Aligned_cols=165  Identities=21%  Similarity=0.200  Sum_probs=123.9

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      ++.|+.||.+++++|++.++++|||+|| .++|+.....+   ++|+.+.+.. +..+.+.|+.+|.++|++++.+.+++
T Consensus        79 ~~~Nv~gt~~ll~~a~~~~v~~~i~~SS-~~vyg~~~~~~---~~E~~~~~~~-~~~~~~~Y~~sK~~~E~~~~~~~~~~  153 (315)
T d1e6ua_          79 IYQNMMIESNIIHAAHQNDVNKLLFLGS-SCIYPKLAKQP---MAESELLQGT-LEPTNEPYAIAKIAGIKLCESYNRQY  153 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCEEEEECC-GGGSCTTCCSS---BCGGGTTSSC-CCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEECC-ceEcCCCCCCC---ccCCccccCC-CCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999 68888665544   7777544332 22455689999999999999999999


Q ss_pred             CCcEEEecCCceeCCCCCCCCh--hhHH------HHHHHHhCCccc---cCCCCcccccHHHHHHHHHHhhcCCCC----
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVN--ASII------HILKYLNGSAKT---YANSVQAYVHVRDVALAHILVYETPSA----  146 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~--~~~~------~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~~~~~----  146 (178)
                      |++++++||++||||+......  ....      .......+....   .|.+.++|+|++|+++++..+++....    
T Consensus       154 gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~~~~~~~~  233 (315)
T d1e6ua_         154 GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLE  233 (315)
T ss_dssp             CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHH
T ss_pred             CCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhhhhccccccc
Confidence            9999999999999997543211  1111      122233333322   246789999999999999998866421    


Q ss_pred             -----CCcEEE-ecCccCHHHHHHHHHHhCC
Q 030406          147 -----SGRYLC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       147 -----~~~~~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                           .+.++. .+...++.++++.+.+.++
T Consensus       234 ~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~  264 (315)
T d1e6ua_         234 NTQPMLSHINVGTGVDCTIRELAQTIAKVVG  264 (315)
T ss_dssp             TSBTTBCCEEESCSCCEEHHHHHHHHHHHHT
T ss_pred             cccccccccccCCCcchHHHHHHHHHHHHhC
Confidence                 235554 6778999999999998764

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=3e-22  Score=148.57  Aligned_cols=161  Identities=23%  Similarity=0.216  Sum_probs=120.2

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh-
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA-   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-   80 (178)
                      +++|+.||+++|++|++.+++++|++|| .++|+.....+   ..|.+     ....|.+.|+.+|..+|+++..+... 
T Consensus        97 ~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss-~~vy~~~~~~~---~~e~~-----~~~~p~~~Y~~sK~~~e~~~~~~~~~~  167 (338)
T d1udca_          97 YDNNVNGTLRLISAMRAANVKNFIFSSS-ATVYGDQPKIP---YVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQ  167 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEE-GGGGCSCCSSS---BCTTS-----CCCCCSSHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHhHHHHHHHHHHHHHHhCCCEEEecCc-ceEEccccccc---ccccc-----ccCCCcchHHHHHhhhhHHHHHHHhhc
Confidence            5789999999999999999999999999 68886554443   44443     13468899999999999999865554 


Q ss_pred             cCCcEEEecCCceeCCCCCCC--------ChhhHHHHHHHHhCCc-c--c--------cCCCCcccccHHHHHHHHHHhh
Q 030406           81 RGVDLVVVNPVLVLGPLLQST--------VNASIIHILKYLNGSA-K--T--------YANSVQAYVHVRDVALAHILVY  141 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~--------~~~~~~~~~~~~~~~~-~--~--------~~~~~~~~i~v~D~a~~~~~~~  141 (178)
                      .+++++++|++++||++....        ....+..+.....+.. +  .        .|.+.++|+|++|++.++..+.
T Consensus       168 ~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~~~~~~~~  247 (338)
T d1udca_         168 PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAM  247 (338)
T ss_dssp             TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHH
T ss_pred             cCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehhhhccccc
Confidence            589999999999999865421        1224445555444332 1  1        1467899999999998887766


Q ss_pred             cCC---CCCCcEEE-ecCccCHHHHHHHHHHhCC
Q 030406          142 ETP---SASGRYLC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       142 ~~~---~~~~~~~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                      ...   ..++.||+ +++++|+.|+++.+.+.++
T Consensus       248 ~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g  281 (338)
T d1udca_         248 EKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACG  281 (338)
T ss_dssp             HHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHT
T ss_pred             cccccccCcceeeecCCCCCcHHHHHHHHHHHHC
Confidence            532   22347887 5578999999999999874

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=7.2e-22  Score=146.56  Aligned_cols=165  Identities=18%  Similarity=0.220  Sum_probs=124.8

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCch-hhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDL-EFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~-~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.||.+++++|.+.++ +++|+|| +.+|+......   ..|..+... .....|.+.|+.+|.++|++++.+.++
T Consensus        91 ~~~nv~gt~~ll~~~~~~~~-~~~~~ss-~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~  165 (342)
T d2blla1          91 FELDFEENLRIIRYCVKYRK-RIIFPST-SEVYGMCSDKY---FDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK  165 (342)
T ss_dssp             HHHHTHHHHHHHHHHHHTTC-EEEEECC-GGGGBTCCCSS---BCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccc-ccccccc-ccccccccccc---cccccccccccccCCCcchhhhcccchhhhhhhhhcc
Confidence            57899999999999999886 4678888 67887655443   444332221 123367789999999999999999999


Q ss_pred             cCCcEEEecCCceeCCCCCCCC------h-hhHHHHHHHHhCCccc---cCCCCcccccHHHHHHHHHHhhcCCC--C-C
Q 030406           81 RGVDLVVVNPVLVLGPLLQSTV------N-ASIIHILKYLNGSAKT---YANSVQAYVHVRDVALAHILVYETPS--A-S  147 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~~------~-~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~~~~--~-~  147 (178)
                      +|++++++|++.+||++.....      . .....+.+.+.|+...   .|++.++|+|++|+++++..+++.+.  . +
T Consensus       166 ~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~g  245 (342)
T d2blla1         166 EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDG  245 (342)
T ss_dssp             HCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTT
T ss_pred             cCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhccccCCC
Confidence            9999999999999998644321      1 2233455667777633   35789999999999999999998742  2 3


Q ss_pred             CcEEEe-cC-ccCHHHHHHHHHHhCC
Q 030406          148 GRYLCA-ES-VLHRGEVVEILAKFFP  171 (178)
Q Consensus       148 ~~~~~~-~~-~~s~~e~~~~i~~~~~  171 (178)
                      +.||++ ++ .+|++|+++.+++.++
T Consensus       246 ~~~Nig~~~~~~t~~~l~~~i~~~~~  271 (342)
T d2blla1         246 EIINIGNPENEASIEELGEMLLASFE  271 (342)
T ss_dssp             EEEEECCTTSEEEHHHHHHHHHHHHH
T ss_pred             eEEEEecccchhHHHHHHHHHHHHhC
Confidence            488874 44 5899999999988763

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.88  E-value=3e-22  Score=151.32  Aligned_cols=169  Identities=20%  Similarity=0.254  Sum_probs=120.7

Q ss_pred             chhHHHHHHHHHHHHHhCCCC-EEEEeccccccccCCCCCCC---CccCCCCCCc-hhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKVR-RVVFTSSIGAVYMDPNRSPD---DVVDESCWSD-LEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~-~~i~~Ss~~~~~~~~~~~~~---~~~~E~~~~~-~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.||.+++++|++.+++ +++++|| ..+|+.......   ....|+...+ .+.+..|.+.|+.+|+.+|.+++.
T Consensus       117 ~~~Nv~gt~nll~~~~~~~~~~~~i~~ss-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~  195 (393)
T d1i24a_         117 QHNNVIGTLNVLFAIKEFGEECHLVKLGT-MGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAF  195 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEEEEECC-GGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccccccccHHHHHHHHhccccceeeccc-cccccccccccccccccccccccccccccccccccHHHHHhhhhcccccc
Confidence            468999999999999998754 6777777 677764432110   0011111110 112346788999999999999999


Q ss_pred             HHHhcCCcEEEecCCceeCCCCCCCC---------------hhhHH-HHHHHHhCCccc-c--CCCCcccccHHHHHHHH
Q 030406           77 EAVARGVDLVVVNPVLVLGPLLQSTV---------------NASII-HILKYLNGSAKT-Y--ANSVQAYVHVRDVALAH  137 (178)
Q Consensus        77 ~~~~~~~~~~i~R~~~v~G~~~~~~~---------------~~~~~-~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~~~  137 (178)
                      +.++++++++++||+++||++.....               ...+. .+.+...+.+.. +  +.+.++|+|++|+++++
T Consensus       196 ~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~  275 (393)
T d1i24a_         196 TCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCV  275 (393)
T ss_dssp             HHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHH
T ss_pred             cccccceeeeecccccccCCCccccccccccccccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHH
Confidence            99999999999999999998754221               11223 334555565533 3  56789999999999999


Q ss_pred             HHhhcCCCCCCcE-E--EecCccCHHHHHHHHHHhCC
Q 030406          138 ILVYETPSASGRY-L--CAESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       138 ~~~~~~~~~~~~~-~--~~~~~~s~~e~~~~i~~~~~  171 (178)
                      ..+++.+...+.+ +  .+++.+|++|+++++++..+
T Consensus       276 ~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~  312 (393)
T d1i24a_         276 EIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGS  312 (393)
T ss_dssp             HHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHH
T ss_pred             HHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHH
Confidence            9999988777644 2  45678999999999988654

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.86  E-value=3.2e-21  Score=145.17  Aligned_cols=167  Identities=23%  Similarity=0.260  Sum_probs=120.4

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      ++.|+.+|.+++++|++.++++++++|| .++|+......  ...|..+..++.+..|.+.|+.+|..+|++++.+.+.+
T Consensus       117 ~~~N~~~t~~~l~~~~~~~~~~~~~~~s-~~~~~~~~~~~--~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~  193 (383)
T d1gy8a_         117 YDNNVVGILRLLQAMLLHKCDKIIFSSS-AAIFGNPTMGS--VSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY  193 (383)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCEEEEEEE-GGGTBSCCC-------CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccchhhhccCCcccccccc-ccccccccccc--ccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh
Confidence            4689999999999999999999999999 57776443321  02223333333366899999999999999999999999


Q ss_pred             CCcEEEecCCceeCCCCCCCCh-------hhHHHHH-HHH----------------hCCc-cc--------cCCCCcccc
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVN-------ASIIHIL-KYL----------------NGSA-KT--------YANSVQAYV  128 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~-------~~~~~~~-~~~----------------~~~~-~~--------~~~~~~~~i  128 (178)
                      |++++++||+++||++......       ..++.+. +.+                .+.+ ..        .|.+.++|+
T Consensus       194 gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi  273 (383)
T d1gy8a_         194 GIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYV  273 (383)
T ss_dssp             CCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEE
T ss_pred             CCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeE
Confidence            9999999999999987654211       1122111 111                1111 11        146678999


Q ss_pred             cHHHHHHHHHHhhcCC---------CCCCcEEE-ecCccCHHHHHHHHHHhCC
Q 030406          129 HVRDVALAHILVYETP---------SASGRYLC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       129 ~v~D~a~~~~~~~~~~---------~~~~~~~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                      |++|++++++.+++..         ...++||+ +++++|+.|+++.+.+.++
T Consensus       274 ~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~i~~~~~  326 (383)
T d1gy8a_         274 HVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTG  326 (383)
T ss_dssp             EHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHC
T ss_pred             EHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHHHHHHHhC
Confidence            9999999999988641         11237887 6789999999999999874

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.86  E-value=2.4e-21  Score=143.33  Aligned_cols=159  Identities=11%  Similarity=0.034  Sum_probs=123.1

Q ss_pred             chhHHHHHHHHHHHHHhC-----CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA-----KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~-----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      ++.|+.++.++++++++.     ...++++.|| +.+++... .+   ++|++      +..|.+.|+.+|..+|.++..
T Consensus       103 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss-~~~~~~~~-~~---~~E~~------~~~p~~~Y~~sK~~~E~~~~~  171 (339)
T d1n7ha_         103 ADVVATGALRLLEAVRSHTIDSGRTVKYYQAGS-SEMFGSTP-PP---QSETT------PFHPRSPYAASKCAAHWYTVN  171 (339)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEE-GGGGTTSC-SS---BCTTS------CCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccccccccchhhhhhhhcccccccceeeeeccc-ceecccCC-CC---CCCCC------CCCCcchhhHHHHHHHHHHHH
Confidence            467999999999999753     3457788777 56665432 22   78887      567999999999999999999


Q ss_pred             HHHhcCCcEEEecCCceeCCCCCCCCh--hhHHHHHHHHhCCcc--cc--CCCCcccccHHHHHHHHHHhhcCCCCCCcE
Q 030406           77 EAVARGVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAK--TY--ANSVQAYVHVRDVALAHILVYETPSASGRY  150 (178)
Q Consensus        77 ~~~~~~~~~~i~R~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~--~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~  150 (178)
                      +.++++++++++||++||||.......  .....+.....+..+  ..  +.+.++|+|++|+++++..+++.+...+.+
T Consensus       172 ~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~~~~~~~  251 (339)
T d1n7ha_         172 YREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKPDDYV  251 (339)
T ss_dssp             HHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSSCCEEE
T ss_pred             HHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHhcCCCCccc
Confidence            999999999999999999997544321  122233333434332  22  567999999999999999999998766666


Q ss_pred             EEecCccCHHHHHHHHHHhCC
Q 030406          151 LCAESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       151 ~~~~~~~s~~e~~~~i~~~~~  171 (178)
                      +..+.+.++.++++.+.+.++
T Consensus       252 ~~~~~~~s~~~~~~~~~~~~~  272 (339)
T d1n7ha_         252 VATEEGHTVEEFLDVSFGYLG  272 (339)
T ss_dssp             ECCSCEEEHHHHHHHHHHHTT
T ss_pred             cccccccccchhhhhhhhhhh
Confidence            778889999999999999885

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=8.5e-21  Score=140.95  Aligned_cols=161  Identities=20%  Similarity=0.209  Sum_probs=118.9

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh-
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA-   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-   80 (178)
                      +++|+.||.+++++|++.++++|||+|| +.+|+......   ..+..     ....+.++|+.+|..+|+.+..+++. 
T Consensus       105 ~~~Nv~gt~~l~~~~~~~~v~~~i~~ss-~~~~~~~~~~~---~~~~~-----~~~~~~~~Y~~~k~~~e~~~~~~~~~~  175 (346)
T d1ek6a_         105 YRVNLTGTIQLLEIMKAHGVKNLVFSSS-ATVYGNPQYLP---LDEAH-----PTGGCTNPYGKSKFFIEEMIRDLCQAD  175 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCEEEEEEE-GGGGCSCSSSS---BCTTS-----CCCCCSSHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHhhhcccccccchhhhcCccccccccc-ceeeecccccc---ccccc-----cccccCChHHHHHHHHHHHHHHHHHhc
Confidence            5789999999999999999999999999 67776554332   11111     12357789999999999999987765 


Q ss_pred             cCCcEEEecCCceeCCCCCCC--------ChhhHHHHHHHHhCCc-c----------ccCCCCcccccHHHHHHHHHHhh
Q 030406           81 RGVDLVVVNPVLVLGPLLQST--------VNASIIHILKYLNGSA-K----------TYANSVQAYVHVRDVALAHILVY  141 (178)
Q Consensus        81 ~~~~~~i~R~~~v~G~~~~~~--------~~~~~~~~~~~~~~~~-~----------~~~~~~~~~i~v~D~a~~~~~~~  141 (178)
                      .+++.+++||+.+||+.....        ....+..+.....+.. +          ..|.+.++|+|++|+|.++..++
T Consensus       176 ~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~  255 (346)
T d1ek6a_         176 KTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAAL  255 (346)
T ss_dssp             TTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHH
T ss_pred             cCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhc
Confidence            589999999999999864321        1223444444433322 1          12567889999999999998775


Q ss_pred             cCC---CCCCcEEE-ecCccCHHHHHHHHHHhCC
Q 030406          142 ETP---SASGRYLC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       142 ~~~---~~~~~~~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                      ...   ...+.||+ +++.+++.|+++.+++.++
T Consensus       256 ~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~  289 (346)
T d1ek6a_         256 RKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASG  289 (346)
T ss_dssp             HHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHC
T ss_pred             cccccccCceEEEeCCCCcccHHHHHHHHHHHhC
Confidence            443   22347886 5688999999999999874

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=3.1e-20  Score=138.03  Aligned_cols=163  Identities=20%  Similarity=0.207  Sum_probs=119.5

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCC-CCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSP-DDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~-~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      +++|+.||.+|+++|++.+++++|++|| .++|+.....+ ..+++|+.      +..|.+.|+.+|.++|++++.+.++
T Consensus        98 ~~~N~~~t~~ll~~~~~~~i~~~i~~SS-~~vyg~~~~~~~~~~~~e~~------~~~p~~~Y~~sK~~~E~~~~~~~~~  170 (347)
T d1z45a2          98 YHNNILGTVVLLELMQQYNVSKFVFSSS-ATVYGDATRFPNMIPIPEEC------PLGPTNPYGHTKYAIENILNDLYNS  170 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEE-GGGGCCGGGSTTCCSBCTTS------CCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             cccchhhhHHHHHHHHhcccceEEeecc-eeeecCcccCCCCCcccccc------CCCCCChhHhHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999 57887543321 22356654      5578899999999999999988654


Q ss_pred             --cCCcEEEecCCceeCCCCCCC--------ChhhHHHHHHHHhCCc-c--ccC--------CCCcccccHHHHHHHHHH
Q 030406           81 --RGVDLVVVNPVLVLGPLLQST--------VNASIIHILKYLNGSA-K--TYA--------NSVQAYVHVRDVALAHIL  139 (178)
Q Consensus        81 --~~~~~~i~R~~~v~G~~~~~~--------~~~~~~~~~~~~~~~~-~--~~~--------~~~~~~i~v~D~a~~~~~  139 (178)
                        .+++++++|++++||+.....        ....+..+.....+.. +  .+|        ...+|++++.|++.++..
T Consensus       171 ~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~~~~~~~~~  250 (347)
T d1z45a2         171 DKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIA  250 (347)
T ss_dssp             STTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHH
T ss_pred             hccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeeeecccccccc
Confidence              578999999999999754221        1124555555554432 2  222        346788888899988888


Q ss_pred             hhcCC-------CCCCcEEE-ecCccCHHHHHHHHHHhCC
Q 030406          140 VYETP-------SASGRYLC-AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       140 ~~~~~-------~~~~~~~~-~~~~~s~~e~~~~i~~~~~  171 (178)
                      +++..       ...+.||+ +++++|+.|+++.+.+.++
T Consensus       251 ~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~  290 (347)
T d1z45a2         251 ALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASG  290 (347)
T ss_dssp             HHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHT
T ss_pred             cccccccccccccccccceecCCCcccHHHHHHHHHHHHC
Confidence            76531       12347887 5789999999999999874

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=1.7e-19  Score=131.08  Aligned_cols=158  Identities=18%  Similarity=0.184  Sum_probs=109.6

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      .+.|+.++.++++++++.+++ +++.|| +.++.......   ..|+.      +..|.+.|+.+|..+|.++..+..++
T Consensus        90 ~~~~~~~~~~~l~~~~~~~i~-~v~~ss-~~~~~~~~~~~---~~~~~------~~~~~~~Y~~~K~~~e~~~~~~~~~~  158 (307)
T d1eq2a_          90 MDNNYQYSKELLHYCLEREIP-FLYASS-AATYGGRTSDF---IESRE------YEKPLNVYGYSKFLFDEYVRQILPEA  158 (307)
T ss_dssp             HHHTHHHHHHHHHHHHHHTCC-EEEEEE-GGGGTTCCSCB---CSSGG------GCCCSSHHHHHHHHHHHHHHHHGGGC
T ss_pred             ccccccccccccccccccccc-cccccc-ccccccccccc---ccccc------ccccccccccccchhhhhcccccccc
Confidence            356899999999999998887 555555 34444332222   33332      44788999999999999999999999


Q ss_pred             CCcEEEecCCceeCCCCCCCC--hhhHHHHHHHHh-CCccc--c--CCCCcccccHHHHHHHHHHhhcCCCCCCcEEE-e
Q 030406           82 GVDLVVVNPVLVLGPLLQSTV--NASIIHILKYLN-GSAKT--Y--ANSVQAYVHVRDVALAHILVYETPSASGRYLC-A  153 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~--~~~~~~~~~~~~-~~~~~--~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~  153 (178)
                      +++++++||+++|||+.....  ......+.+.+. ++.+.  .  +...++|+|++|+++++..+++.+. .+.|++ +
T Consensus       159 ~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~-~~~~~~~~  237 (307)
T d1eq2a_         159 NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-SGIFNLGT  237 (307)
T ss_dssp             SSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC-CEEEEESC
T ss_pred             ccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc-cccccccc
Confidence            999999999999999754321  122333444433 43332  2  3568899999999999999998764 457765 7


Q ss_pred             cCccCHHHHHHHHHHhCC
Q 030406          154 ESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       154 ~~~~s~~e~~~~i~~~~~  171 (178)
                      ++..|++|+++.+++..+
T Consensus       238 ~~~~si~~i~~~i~~~~~  255 (307)
T d1eq2a_         238 GRAESFQAVADATLAYHK  255 (307)
T ss_dssp             SCCBCHHHHHHHC-----
T ss_pred             ccchhHHHHHHHHHHhcC
Confidence            889999999999987664

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.73  E-value=1.9e-17  Score=119.04  Aligned_cols=150  Identities=16%  Similarity=0.098  Sum_probs=115.6

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +..|+..+.++.++++..+ .+++++|| ..+|+.....+   .+|.+      +..+...|+.+|..+|+++++    .
T Consensus        76 ~~~n~~~~~~~~~~~~~~~-~~~~~~ss-~~v~~~~~~~~---~~e~~------~~~~~~~~~~~k~~~e~~~~~----~  140 (281)
T d1vl0a_          76 YKINAIGPKNLAAAAYSVG-AEIVQIST-DYVFDGEAKEP---ITEFD------EVNPQSAYGKTKLEGENFVKA----L  140 (281)
T ss_dssp             HHHHTHHHHHHHHHHHHHT-CEEEEEEE-GGGSCSCCSSC---BCTTS------CCCCCSHHHHHHHHHHHHHHH----H
T ss_pred             ccccccccccccccccccc-cccccccc-ceeeecccccc---ccccc------cccchhhhhhhhhHHHHHHHH----h
Confidence            3568888888888888765 46777887 57777665555   77776      457889999999999998765    3


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCc-cccCCCCcccccHHHHHHHHHHhhcCCCCCCcEE-EecCccCH
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA-KTYANSVQAYVHVRDVALAHILVYETPSASGRYL-CAESVLHR  159 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~-~~~~~~s~  159 (178)
                      +.+.+++||+++||++.+.    ....+.....+.. ...+++.++++|++|+++++..+++.... +.|+ .+++.+|+
T Consensus       141 ~~~~~i~R~~~vyG~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~-g~~~~~~~~~~s~  215 (281)
T d1vl0a_         141 NPKYYIVRTAWLYGDGNNF----VKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKNY-GTFHCTCKGICSW  215 (281)
T ss_dssp             CSSEEEEEECSEESSSSCH----HHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTCC-EEEECCCBSCEEH
T ss_pred             CCCccccceeEEeCCCccc----ccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhccc-CceeEeCCCccch
Confidence            7899999999999987321    2222333334443 44578899999999999999999988754 5776 57789999


Q ss_pred             HHHHHHHHHhCC
Q 030406          160 GEVVEILAKFFP  171 (178)
Q Consensus       160 ~e~~~~i~~~~~  171 (178)
                      .|+++.+++.+.
T Consensus       216 ~e~~~~i~~~~g  227 (281)
T d1vl0a_         216 YDFAVEIFRLTG  227 (281)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhC
Confidence            999999999874

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.71  E-value=9.8e-17  Score=117.95  Aligned_cols=170  Identities=17%  Similarity=0.122  Sum_probs=117.4

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCC-------CCCchhhhcccCchHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDES-------CWSDLEFCKNTKNWYCYGKAVAEKAA   74 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~-------~~~~~~~~~~~~~~Y~~sK~~~E~~~   74 (178)
                      +++|+.||+||+++|.+.+++++|+.||.+++++.....+.....+.       .......+..|.+.|+.+|...|.++
T Consensus        96 ~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~  175 (338)
T d1orra_          96 FEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYM  175 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccccccccccccchhhhhh
Confidence            47899999999999999988777777775666665433221000000       00011123468899999999999999


Q ss_pred             HHHHHhcCCcEEEecCCceeCCCCCCCCh-hhHHHH----HHHHh--CCc-ccc--CCCCcccccHHHHHHHHHHhhcCC
Q 030406           75 WEEAVARGVDLVVVNPVLVLGPLLQSTVN-ASIIHI----LKYLN--GSA-KTY--ANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        75 ~~~~~~~~~~~~i~R~~~v~G~~~~~~~~-~~~~~~----~~~~~--~~~-~~~--~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      ..+.+.++....++|++++||+....... .....+    .....  ++. ..+  |.+.++|+|++|++++++.+++..
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~  255 (338)
T d1orra_         176 LDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANV  255 (338)
T ss_dssp             HHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTH
T ss_pred             hhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeecccchhhHHHHHHhcc
Confidence            99999999999999999999876543322 122222    22222  222 223  467899999999999999999774


Q ss_pred             C--CCCcEEE---ecCccCHHHHHHHHHHhCC
Q 030406          145 S--ASGRYLC---AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       145 ~--~~~~~~~---~~~~~s~~e~~~~i~~~~~  171 (178)
                      .  .++.|++   .+..+++.|+++.+.+..+
T Consensus       256 ~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~  287 (338)
T d1orra_         256 SKIRGNAFNIGGTIVNSLSLLELFKLLEDYCN  287 (338)
T ss_dssp             HHHTTCEEEESSCGGGEEEHHHHHHHHHHHHT
T ss_pred             ccccCccccccccccccccHHHHHHHHHHHHC
Confidence            3  2446765   2467899999999998864

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.67  E-value=3.3e-16  Score=116.09  Aligned_cols=160  Identities=18%  Similarity=0.169  Sum_probs=114.3

Q ss_pred             chhHHHHHHHHHHHHHhCC-CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH-
Q 030406            2 VEPAVIGTKNVIVAAAEAK-VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV-   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-   79 (178)
                      +++|+.|+.+++++|++.+ .+.+++.|| +.+++......  ...|+.      +..|.+.|+.+|...|..+..+.. 
T Consensus       103 ~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~-~~~~~~~~~~~--~~~~~~------~~~p~~~y~~~k~~~e~~~~~~~~~  173 (356)
T d1rkxa_         103 YSTNVMGTVYLLEAIRHVGGVKAVVNITS-DKCYDNKEWIW--GYRENE------AMGGYDPYSNSKGCAELVTSSYRNS  173 (356)
T ss_dssp             HHHHTHHHHHHHHHHHHHCCCCEEEEECC-GGGBCCCCSSS--CBCTTS------CBCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccchhhhhhhhccccccccccccc-ccccccccccc--cccccc------ccCCCCccccccccchhhhhHHhhh
Confidence            5689999999999999865 555666655 55554333221  255554      457889999999999999887655 


Q ss_pred             --------hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCcc-cc--CCCCcccccHHHHHHHHHHhhcCCCCCC
Q 030406           80 --------ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAK-TY--ANSVQAYVHVRDVALAHILVYETPSASG  148 (178)
Q Consensus        80 --------~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~  148 (178)
                              ++++.++++||+++|||+.... ...+..+.+...+..+ .+  +.+.++++|++|++.++..++......+
T Consensus       174 ~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a~~~~~~~~~~~~  252 (356)
T d1rkxa_         174 FFNPANYGQHGTAVATVRAGNVIGGGDWAL-DRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDG  252 (356)
T ss_dssp             HSCGGGHHHHCCEEEEEECCCEECTTCCCS-SCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHHHHHHHTC
T ss_pred             cccchhccccCceEEeccCCCeeCCCcchh-hHHHHHHHHHHhCCCceEEeeccccccccccccccchhhhhhhhhcccc
Confidence                    4467899999999999986543 2344445555555443 33  5778999999999999999887643322


Q ss_pred             -----cEEE---ecCccCHHHHHHHHHHhCC
Q 030406          149 -----RYLC---AESVLHRGEVVEILAKFFP  171 (178)
Q Consensus       149 -----~~~~---~~~~~s~~e~~~~i~~~~~  171 (178)
                           ..+.   ....+++.++++.+.+.++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  283 (356)
T d1rkxa_         253 AEYAEGWNFGPNDADATPVKNIVEQMVKYWG  283 (356)
T ss_dssp             GGGCSEEECCCCGGGCEEHHHHHHHHHHHHC
T ss_pred             cccccccccccccccccccchhhhhhHHHhC
Confidence                 2222   2457899999999998874

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=2e-15  Score=105.90  Aligned_cols=122  Identities=17%  Similarity=0.019  Sum_probs=88.6

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.+++++|++.++++|||+||. ..++                      .+.+.|+.+|..+|..+.+    .
T Consensus       101 ~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~-~~~~----------------------~~~~~Y~~~K~~~E~~l~~----~  153 (232)
T d2bkaa1         101 VRVDRDYVLKSAELAKAGGCKHFNLLSSK-GADK----------------------SSNFLYLQVKGEVEAKVEE----L  153 (232)
T ss_dssp             HHHHTHHHHHHHHHHHHTTCCEEEEECCT-TCCT----------------------TCSSHHHHHHHHHHHHHHT----T
T ss_pred             hhhcccccceeeecccccCccccccCCcc-cccc----------------------CccchhHHHHHHhhhcccc----c
Confidence            46899999999999999999999999994 4321                      2457799999999998765    3


Q ss_pred             CCc-EEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcEEEec
Q 030406           82 GVD-LVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRYLCAE  154 (178)
Q Consensus        82 ~~~-~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~  154 (178)
                      +++ ++|+||+.+||++....   ....+........+ .+......||++|+|++++.++..+..++.+++++
T Consensus       154 ~~~~~~IlRP~~i~G~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~I~~~dvA~a~i~~~~~~~~~~~~i~~~  223 (232)
T d2bkaa1         154 KFDRYSVFRPGVLLCDRQESR---PGEWLVRKFFGSLP-DSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLEN  223 (232)
T ss_dssp             CCSEEEEEECCEEECTTGGGS---HHHHHHHHHHCSCC-TTGGGGTEEEHHHHHHHHHHHHTSCCCSSEEEEEH
T ss_pred             cccceEEecCceeecCCCcCc---HHHHHHHHHhhccC-CcccCCCeEEHHHHHHHHHHHHhcCccCCeEEEcH
Confidence            564 89999999999864432   22222222212111 11234457999999999999998887777777765

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.60  E-value=7.6e-16  Score=106.55  Aligned_cols=115  Identities=18%  Similarity=0.132  Sum_probs=82.2

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      .+.|+.++.+++++|++.+++++||+||. ..++                      .+.+.|+.+|..+|+.+.+    .
T Consensus        84 ~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~-~~~~----------------------~~~~~y~~~K~~~E~~l~~----~  136 (212)
T d2a35a1          84 RAVDFDLPLAVGKRALEMGARHYLVVSAL-GADA----------------------KSSIFYNRVKGELEQALQE----Q  136 (212)
T ss_dssp             HHHHTHHHHHHHHHHHHTTCCEEEEECCT-TCCT----------------------TCSSHHHHHHHHHHHHHTT----S
T ss_pred             ccchhhhhhhccccccccccccccccccc-cccc----------------------ccccchhHHHHHHhhhccc----c
Confidence            46799999999999999999999999994 4432                      2457799999999998753    3


Q ss_pred             CC-cEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCcE
Q 030406           82 GV-DLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGRY  150 (178)
Q Consensus        82 ~~-~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~  150 (178)
                      ++ +++|+||+.+||+.......       ..+...........+..||++|+|++++.+++.+..+..|
T Consensus       137 ~~~~~~I~Rp~~v~G~~~~~~~~-------~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~~g~~~  199 (212)
T d2a35a1         137 GWPQLTIARPSLLFGPREEFRLA-------EILAAPIARILPGKYHGIEACDLARALWRLALEEGKGVRF  199 (212)
T ss_dssp             CCSEEEEEECCSEESTTSCEEGG-------GGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCCSEEEE
T ss_pred             ccccceeeCCcceeCCcccccHH-------HHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCCCCCEE
Confidence            56 49999999999986433211       1111111112234456799999999999999887554333

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.57  E-value=2.3e-14  Score=103.21  Aligned_cols=150  Identities=15%  Similarity=0.089  Sum_probs=107.7

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      ++.|+.++.+|+++|++.++ +++++|| +.+|+.....|   ++|++      +..|.+.|+.+|..+|..+..+.   
T Consensus        78 ~~~n~~~~~~l~~~~~~~~~-~~~~~ss-~~~~~~~~~~~---~~E~~------~~~p~~~y~~~k~~~e~~~~~~~---  143 (298)
T d1n2sa_          78 QLLNATSVEAIAKAANETGA-WVVHYST-DYVFPGTGDIP---WQETD------ATSPLNVYGKTKLAGEKALQDNC---  143 (298)
T ss_dssp             HHHHTHHHHHHHHHHTTTTC-EEEEEEE-GGGSCCCTTCC---BCTTS------CCCCSSHHHHHHHHHHHHHHHHC---
T ss_pred             ccccccccccchhhhhcccc-ccccccc-cccccCCCCCC---Ccccc------ccCCCchHhhhhhhhhhhHHhhh---
Confidence            46799999999999999885 6888888 56666555544   78876      55788999999999999987643   


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCc--cccCCCCcccccHHHHHHHHHHhhc----CCCCCCcEEE-ec
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA--KTYANSVQAYVHVRDVALAHILVYE----TPSASGRYLC-AE  154 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~v~D~a~~~~~~~~----~~~~~~~~~~-~~  154 (178)
                       ....++|++..++.....    ....+.+.+....  ...+....+++|++|+++++..+++    .+...+.||+ ++
T Consensus       144 -~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~  218 (298)
T d1n2sa_         144 -PKHLIFRTSWVYAGKGNN----FAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAG  218 (298)
T ss_dssp             -SSEEEEEECSEECSSSCC----HHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCB
T ss_pred             -cccccccccceeeccCCc----cchhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhhccccccccccccCC
Confidence             345667766666443222    2223334333333  3346778899999999999988765    3445668886 56


Q ss_pred             CccCHHHHHHHHHHhC
Q 030406          155 SVLHRGEVVEILAKFF  170 (178)
Q Consensus       155 ~~~s~~e~~~~i~~~~  170 (178)
                      +.++..++++.+.+..
T Consensus       219 ~~~~~~~~~~~i~~~~  234 (298)
T d1n2sa_         219 GTTTWHDYAALVFDEA  234 (298)
T ss_dssp             SCEEHHHHHHHHHHHH
T ss_pred             CceecHHHHHHHHhhh
Confidence            7899999999887643

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=6.7e-14  Score=96.20  Aligned_cols=117  Identities=16%  Similarity=0.158  Sum_probs=86.2

Q ss_pred             hhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcC
Q 030406            3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG   82 (178)
Q Consensus         3 ~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~   82 (178)
                      +.+..+++++++++++++++|||++|| ..++.+....+                .....|...|..+|++++    +.|
T Consensus        85 ~~~~~~~~~l~~aa~~~~v~r~i~~ss-~~~~~~~~~~~----------------~~~~~~~~~~~~~e~~l~----~~~  143 (205)
T d1hdoa_          85 TVMSEGARNIVAAMKAHGVDKVVACTS-AFLLWDPTKVP----------------PRLQAVTDDHIRMHKVLR----ESG  143 (205)
T ss_dssp             CHHHHHHHHHHHHHHHHTCCEEEEECC-GGGTSCTTCSC----------------GGGHHHHHHHHHHHHHHH----HTC
T ss_pred             hhhHHHHHHHHHHHHhcCCCeEEEEee-eeccCCCcccc----------------ccccccchHHHHHHHHHH----hcC
Confidence            568899999999999999999999999 45554332211                234568889999998765    458


Q ss_pred             CcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC-cEEEe
Q 030406           83 VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCA  153 (178)
Q Consensus        83 ~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~  153 (178)
                      ++++++||+.+++....+..             .....+.....+|+++|+|++++.+++.++..+ .+..+
T Consensus       144 ~~~tiirp~~~~~~~~~~~~-------------~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s  202 (205)
T d1hdoa_         144 LKYVAVMPPHIGDQPLTGAY-------------TVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPS  202 (205)
T ss_dssp             SEEEEECCSEEECCCCCSCC-------------EEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEE
T ss_pred             CceEEEecceecCCCCcccE-------------EEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecC
Confidence            99999999999875432210             112235567789999999999999999987655 44444

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.48  E-value=3.9e-15  Score=107.95  Aligned_cols=146  Identities=16%  Similarity=0.145  Sum_probs=99.6

Q ss_pred             hhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcC
Q 030406            3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG   82 (178)
Q Consensus         3 ~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~   82 (178)
                      ..|+.++.+++++|++.+..++++.||. +.++..         +..      +..+...|..+|..+++.    ....+
T Consensus        89 ~~~~~~~~~~l~~a~~~~~~~~v~~Ss~-g~~~~~---------~~~------~~~~~~~~~~~~~~~~~~----~~~~~  148 (312)
T d1qyda_          89 SHHILEQLKLVEAIKEAGNIKRFLPSEF-GMDPDI---------MEH------ALQPGSITFIDKRKVRRA----IEAAS  148 (312)
T ss_dssp             STTTTTHHHHHHHHHHSCCCSEEECSCC-SSCTTS---------CCC------CCSSTTHHHHHHHHHHHH----HHHTT
T ss_pred             ccchhhhhHHHHHHHHhcCCcEEEEeec-cccCCC---------ccc------ccchhhhhhHHHHHHHHh----hcccc
Confidence            4678889999999999887778888873 443221         111      224556677777766664    45668


Q ss_pred             CcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCc-ccc--CCCCcccccHHHHHHHHHHhhcCCCCCC-c-EEE-ecCc
Q 030406           83 VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA-KTY--ANSVQAYVHVRDVALAHILVYETPSASG-R-YLC-AESV  156 (178)
Q Consensus        83 ~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~-~~~-~~~~  156 (178)
                      ++++++||+.+||+..........   .....+.. ..+  |++.++|+|++|+|++++.+++.+...+ . |++ +++.
T Consensus       149 ~~~~i~r~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~  225 (312)
T d1qyda_         149 IPYTYVSSNMFAGYFAGSLAQLDG---HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNI  225 (312)
T ss_dssp             CCBCEEECCEEHHHHTTTSSCTTC---CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGE
T ss_pred             cceEEeccceeecCCccchhhHHH---HhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcC
Confidence            999999999999965332111110   00111222 222  5778999999999999999998876544 4 455 4568


Q ss_pred             cCHHHHHHHHHHhCC
Q 030406          157 LHRGEVVEILAKFFP  171 (178)
Q Consensus       157 ~s~~e~~~~i~~~~~  171 (178)
                      +|++|+++.+++.++
T Consensus       226 ~s~~e~~~~~~~~~g  240 (312)
T d1qyda_         226 LSQKEVIQIWERLSE  240 (312)
T ss_dssp             EEHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHC
Confidence            999999999998763

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.41  E-value=4.7e-14  Score=101.57  Aligned_cols=145  Identities=20%  Similarity=0.169  Sum_probs=99.4

Q ss_pred             hhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcC
Q 030406            3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG   82 (178)
Q Consensus         3 ~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~   82 (178)
                      ..++.++.+++++++.++++++++.|+. ....          ++..      ...+...+...+...+..+.    +.+
T Consensus        86 ~~~~~~~~~~~~a~~~~~~~~~~~~s~~-~~~~----------~~~~------~~~~~~~~~~~~~~~~~~~~----~~~  144 (307)
T d1qyca_          86 SLQIESQVNIIKAIKEVGTVKRFFPSEF-GNDV----------DNVH------AVEPAKSVFEVKAKVRRAIE----AEG  144 (307)
T ss_dssp             GGGSGGGHHHHHHHHHHCCCSEEECSCC-SSCT----------TSCC------CCTTHHHHHHHHHHHHHHHH----HHT
T ss_pred             ccccchhhHHHHHHHHhccccceeeecc-cccc----------cccc------ccccccccccccccccchhh----ccC
Confidence            3567788999999999998899998883 3221          1111      11233456666666666554    458


Q ss_pred             CcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCc---cccCCCCcccccHHHHHHHHHHhhcCCCCCC--cEEE-ecCc
Q 030406           83 VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA---KTYANSVQAYVHVRDVALAHILVYETPSASG--RYLC-AESV  156 (178)
Q Consensus        83 ~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~--~~~~-~~~~  156 (178)
                      ++++++||+++||+........    .....++..   +..+++.++|+|++|+|++++.+++.+...+  .|++ +++.
T Consensus       145 ~~~~i~r~~~v~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~  220 (307)
T d1qyca_         145 IPYTYVSSNCFAGYFLRSLAQA----GLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANT  220 (307)
T ss_dssp             CCBEEEECCEEHHHHTTTTTCT----TCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGE
T ss_pred             CCceecccceecCCCccchhhh----hhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCc
Confidence            9999999999999764331110    111122222   2236789999999999999999999876544  4565 5688


Q ss_pred             cCHHHHHHHHHHhCCC
Q 030406          157 LHRGEVVEILAKFFPE  172 (178)
Q Consensus       157 ~s~~e~~~~i~~~~~~  172 (178)
                      +|+.|+++.+.+.++.
T Consensus       221 ~s~~ei~~~~~~~~G~  236 (307)
T d1qyca_         221 LSLNELVALWEKKIDK  236 (307)
T ss_dssp             EEHHHHHHHHHHHTTS
T ss_pred             cCHHHHHHHHHHHHCC
Confidence            9999999999998853

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.38  E-value=5.5e-13  Score=92.98  Aligned_cols=139  Identities=19%  Similarity=0.113  Sum_probs=93.6

Q ss_pred             hhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcC
Q 030406            3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG   82 (178)
Q Consensus         3 ~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~   82 (178)
                      ++|+.++++++..+.....+++.+.|+. ..+... . +             ........|...+...+.+    ....+
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~~~-~-~-------------~~~~~~~~~~~~~~~~~~~----~~~~~  165 (252)
T d2q46a1         106 QVDWIGQKNQIDAAKVAGVKHIVVVGSM-GGTNPD-H-P-------------LNKLGNGNILVWKRKAEQY----LADSG  165 (252)
T ss_dssp             HHTTHHHHHHHHHHHHHTCSEEEEEEET-TTTCTT-C-G-------------GGGGGGCCHHHHHHHHHHH----HHHSS
T ss_pred             ccccccceeecccccccccccccccccc-ccCCCC-c-c-------------cccccccchhhhhhhhhhh----hhccc
Confidence            5788999999999999888899998873 322110 0 0             0112344555555555544    45678


Q ss_pred             CcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC-cEEEec----Ccc
Q 030406           83 VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG-RYLCAE----SVL  157 (178)
Q Consensus        83 ~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~----~~~  157 (178)
                      ++++++||+++||+.....         ..+.+..........++||++|+|++++.+++.+...+ .|++++    ...
T Consensus       166 ~~~~ilRp~~v~g~~~~~~---------~~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~~~g~~~~i~~~~~~~~~  236 (252)
T d2q46a1         166 TPYTIIRAGGLLDKEGGVR---------ELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTST  236 (252)
T ss_dssp             SCEEEEEECEEECSCTTSS---------CEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSC
T ss_pred             ccceeecceEEECCCcchh---------hhhhccCcccccCCCCeEEHHHHHHHHHHHhCCccccCcEEEEeeCCCCCCh
Confidence            9999999999999874332         11112222334566789999999999999999887666 787643    245


Q ss_pred             CHHHHHHHHHHhC
Q 030406          158 HRGEVVEILAKFF  170 (178)
Q Consensus       158 s~~e~~~~i~~~~  170 (178)
                      +++|+.+++.+.-
T Consensus       237 ~~~~~~~lf~~i~  249 (252)
T d2q46a1         237 PTKDFKALFSQVT  249 (252)
T ss_dssp             CCCCHHHHHTTCC
T ss_pred             hHHHHHHHHHHHH
Confidence            6778877766543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.07  E-value=4.4e-11  Score=88.04  Aligned_cols=144  Identities=12%  Similarity=-0.024  Sum_probs=96.1

Q ss_pred             hhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhcC
Q 030406            3 EPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVARG   82 (178)
Q Consensus         3 ~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~   82 (178)
                      ..|+..+++++++|++.+++++++.||+ ......                  ...+...|..+|...|..+.    +.+
T Consensus        84 ~~~~~~~~~~~~aa~~agv~~~v~~Ss~-~~~~~~------------------~~~~~~~~~~~k~~~~~~~~----~~~  140 (350)
T d1xgka_          84 GDEIAIGKDLADAAKRAGTIQHYIYSSM-PDHSLY------------------GPWPAVPMWAPKFTVENYVR----QLG  140 (350)
T ss_dssp             SCHHHHHHHHHHHHHHHSCCSEEEEEEC-CCGGGT------------------SSCCCCTTTHHHHHHHHHHH----TSS
T ss_pred             chhhhhhhHHHHHHHHhCCCceEEEeec-cccccC------------------CcccchhhhhhHHHHHHHHH----hhc
Confidence            4578899999999999998888888884 222111                  11233456677887777654    457


Q ss_pred             CcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCc----cccCCCCcccccH-HHHHHHHHHhhcCCC--C-CCcEEEec
Q 030406           83 VDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA----KTYANSVQAYVHV-RDVALAHILVYETPS--A-SGRYLCAE  154 (178)
Q Consensus        83 ~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~v-~D~a~~~~~~~~~~~--~-~~~~~~~~  154 (178)
                      ++++++|++.+++............  .....+..    +..++...+++++ +|+++++..++..+.  . +..|++++
T Consensus       141 ~~~~~vr~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g  218 (350)
T d1xgka_         141 LPSTFVYAGIYNNNFTSLPYPLFQM--ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF  218 (350)
T ss_dssp             SCEEEEEECEEGGGCBSSSCSSCBE--EECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS
T ss_pred             cCceeeeeceeeccccccccccccc--cccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeC
Confidence            8999999998877532221110000  00111111    2235677888876 799999999986542  2 34778888


Q ss_pred             CccCHHHHHHHHHHhCC
Q 030406          155 SVLHRGEVVEILAKFFP  171 (178)
Q Consensus       155 ~~~s~~e~~~~i~~~~~  171 (178)
                      +.+|+.|+++.+.+.++
T Consensus       219 ~~~T~~eia~~l~~~~G  235 (350)
T d1xgka_         219 ETLSPVQVCAAFSRALN  235 (350)
T ss_dssp             EEECHHHHHHHHHHHHT
T ss_pred             CcCCHHHHHHHHHHHHC
Confidence            88999999999999874

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=98.34  E-value=2.1e-06  Score=59.99  Aligned_cols=112  Identities=14%  Similarity=0.112  Sum_probs=78.4

Q ss_pred             chhHHHHHHHHHHHHHhCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHhc
Q 030406            2 VEPAVIGTKNVIVAAAEAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVAR   81 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~   81 (178)
                      +++|+.++.++.++++..+..++|++||+++.++.+                     ....|+.+|...+.+.++.. ..
T Consensus       117 ~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~---------------------~~~~YaAaka~l~~la~~~~-~~  174 (259)
T d2fr1a1         117 SRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAP---------------------GLGGYAPGNAYLDGLAQQRR-SD  174 (259)
T ss_dssp             THHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCT---------------------TCTTTHHHHHHHHHHHHHHH-HT
T ss_pred             hhhhccchhHHHHHhhccCCceEeeecchhhccCCc---------------------ccHHHHHHHHhHHHHHHHHH-hC
Confidence            578999999999999888788999999987765432                     33569999999999988765 56


Q ss_pred             CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC
Q 030406           82 GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG  148 (178)
Q Consensus        82 ~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~  148 (178)
                      |+++..+.||.+.+++....   .   +...+       .......+..+++++++..++..+....
T Consensus       175 Gi~v~~I~pg~~~~~g~~~~---~---~~~~~-------~~~G~~~~~~~~~~~~l~~~l~~~~~~~  228 (259)
T d2fr1a1         175 GLPATAVAWGTWAGSGMAEG---P---VADRF-------RRHGVIEMPPETACRALQNALDRAEVCP  228 (259)
T ss_dssp             TCCCEEEEECCBC------------------C-------TTTTEECBCHHHHHHHHHHHHHTTCSSC
T ss_pred             CCCEEECCCCcccCCccccc---h---HHHHH-------HhcCCCCCCHHHHHHHHHHHHhCCCceE
Confidence            89999999998866542111   0   01111       1112345779999999999998865443

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=2.2e-06  Score=60.87  Aligned_cols=129  Identities=22%  Similarity=0.281  Sum_probs=79.3

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++.+++.    +.+-.++|++||+++..+.                     .....|+.+|...+.+.+.+
T Consensus       111 ~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~---------------------~~~~~Y~asKaal~~l~~~l  169 (285)
T d1jtva_         111 LDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL---------------------PFNDVYCASKFALEGLCESL  169 (285)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             hhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCC---------------------CCchHHHHHHHHHHHHHHHH
Confidence            6789999888887764    4456789999997554321                     23467999999999998776


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChh-----------hHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNA-----------SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      +.+   .|+.+..+.||.+--+-.......           ....+.........   -........+|+|++++.+++.
T Consensus       170 a~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~PeeVA~~v~~~~~~  246 (285)
T d1jtva_         170 AVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQ---VFREAAQNPEEVAEVFLTALRA  246 (285)
T ss_dssp             HHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHH---HHHHHCBCHHHHHHHHHHHHHC
T ss_pred             HHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhh---hhcccCCCHHHHHHHHHHHHhC
Confidence            554   489999999998843211110000           00001110000000   0011245689999999999998


Q ss_pred             CCCCCcEEEec
Q 030406          144 PSASGRYLCAE  154 (178)
Q Consensus       144 ~~~~~~~~~~~  154 (178)
                      +.+.-+|..+.
T Consensus       247 ~~p~~ry~~g~  257 (285)
T d1jtva_         247 PKPTLRYFTTE  257 (285)
T ss_dssp             SSCCSEEESCS
T ss_pred             CCCCeEEecHH
Confidence            86665776554

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=98.11  E-value=6.6e-05  Score=52.50  Aligned_cols=129  Identities=22%  Similarity=0.208  Sum_probs=79.1

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++.    +.+-.++|++||+.+..+..                    .....|+.+|...+.+.+.+
T Consensus       112 ~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~--------------------~~~~~Y~asKaal~~lt~~l  171 (268)
T d2bgka1         112 MDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE--------------------GVSHVYTATKHAVLGLTTSL  171 (268)
T ss_dssp             HHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT--------------------TSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccc--------------------ccccccchhHHHHHhCHHHH
Confidence            5789999888887765    34556899999965543211                    12246999999999998876


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCc-EE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGR-YL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~  151 (178)
                      +.+   +|+++-.+.||.+-.+........................    .-+...+|+|++++.++...  -..|. +.
T Consensus       172 A~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~----gr~~~pedvA~~v~fL~S~~s~~itGq~i~  247 (268)
T d2bgka1         172 CTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLK----GTLLRAEDVADAVAYLAGDESKYVSGLNLV  247 (268)
T ss_dssp             HHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSC----SCCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccC----CCCcCHHHHHHHHHHHhChhhCCccCceEE
Confidence            554   4788999999988665432211111111122111111111    12567999999999988543  34554 45


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.|
T Consensus       248 VDG  250 (268)
T d2bgka1         248 IDG  250 (268)
T ss_dssp             EST
T ss_pred             ECc
Confidence            543

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.09  E-value=2.2e-05  Score=54.48  Aligned_cols=123  Identities=13%  Similarity=0.075  Sum_probs=78.1

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++.    +.+-.++|++||+.+..+.                     .....|+.+|...+.+.+.+
T Consensus       115 ~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~---------------------~~~~~Y~asKaal~~ltr~l  173 (251)
T d2c07a1         115 LRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN---------------------VGQANYSSSKAGVIGFTKSL  173 (251)
T ss_dssp             HHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             heeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCC---------------------CCCHHHHHHHHHHHHHHHHH
Confidence            5789999888877664    3455689999997654421                     13457999999999998877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCcE-E
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGRY-L  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~-~  151 (178)
                      +.+   +|+++-.+.||.+-.+.....    .....+......|     ..-+...+|+|++++.++...  -..|.. .
T Consensus       174 A~el~~~gIrVN~V~PG~v~T~~~~~~----~~~~~~~~~~~~p-----l~R~~~pedvA~~v~fL~S~~s~~itG~~i~  244 (251)
T d2c07a1         174 AKELASRNITVNAIAPGFISSDMTDKI----SEQIKKNIISNIP-----AGRMGTPEEVANLACFLSSDKSGYINGRVFV  244 (251)
T ss_dssp             HHHHGGGTEEEEEEEECSBCC-----C----CHHHHHHHHTTCT-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhhhhCeEEEEEccCCEeccccccc----CHHHHHHHHhcCC-----CCCCcCHHHHHHHHHHHhCchhCCCcCcEEE
Confidence            554   478899999999865432221    1112222222221     112667999999999888543  235544 4


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.|
T Consensus       245 vDG  247 (251)
T d2c07a1         245 IDG  247 (251)
T ss_dssp             EST
T ss_pred             ECC
Confidence            543

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=1.6e-05  Score=54.98  Aligned_cols=118  Identities=20%  Similarity=0.181  Sum_probs=73.9

Q ss_pred             chhHHHHHHHHHHHHHhC----------CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE   71 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----------~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E   71 (178)
                      +++|+.++.++.+++...          +-.++|++||+++..+.                     .....|+.+|...+
T Consensus       113 ~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~---------------------~~~~~Y~asKaal~  171 (248)
T d2o23a1         113 LDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ---------------------VGQAAYSASKGGIV  171 (248)
T ss_dssp             HHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC---------------------TTCHHHHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC---------------------CCchHHHHHHHHHH
Confidence            578999999998887531          22379999997554321                     23467999999999


Q ss_pred             HHHHHHHHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC
Q 030406           72 KAAWEEAVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG  148 (178)
Q Consensus        72 ~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~  148 (178)
                      .+.+.++.+.   |+++..+.||.+-.+....    .............+..+    -+...+|+|++++.+++.+-..|
T Consensus       172 ~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~----~~~~~~~~~~~~~pl~~----R~g~peevA~~v~fL~s~~~itG  243 (248)
T d2o23a1         172 GMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS----LPEKVCNFLASQVPFPS----RLGDPAEYAHLVQAIIENPFLNG  243 (248)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBCCC--------------CHHHHTCSSSC----SCBCHHHHHHHHHHHHHCTTCCS
T ss_pred             HHHHHHHHHhcccCcceeeeccCceecchhhc----CCHHHHHHHHhcCCCCC----CCcCHHHHHHHHHHHHhCCCCCc
Confidence            9988776554   6888889999885332111    11111111112212111    25579999999999887543344

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.02  E-value=1.8e-05  Score=54.54  Aligned_cols=123  Identities=17%  Similarity=0.084  Sum_probs=75.4

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++.    +.+-.++|++||.++..+.                     .....|+.+|...+.+.+.+
T Consensus       101 ~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~l  159 (237)
T d1uzma1         101 INANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI---------------------GNQANYAASKAGVIGMARSI  159 (237)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC--------------------------CCHHHHHHHHHHHHHHHHH
T ss_pred             HHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCC---------------------cccHHHHHHHHHHHHHHHHH
Confidence            6789999877766554    4566799999996554321                     23467999999999988876


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCcE-E
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGRY-L  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~-~  151 (178)
                      +.+   +|+++-.+.||.+..+-...    .............     ...-+...+|+|+++..++...  -..|.. .
T Consensus       160 A~e~~~~gIrVN~I~PG~v~T~~~~~----~~~~~~~~~~~~~-----pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~  230 (237)
T d1uzma1         160 ARELSKANVTANVVAPGYIDTDMTRA----LDERIQQGALQFI-----PAKRVGTPAEVAGVVSFLASEDASYISGAVIP  230 (237)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCHHHHH----SCHHHHHHHGGGC-----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HhhhhcCCceeeeeeeCcCCChhhhc----cCHHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHhCchhcCCcCCeEE
Confidence            554   47888899999885332100    0011111111111     1122567999999999888543  235544 4


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.|
T Consensus       231 vdG  233 (237)
T d1uzma1         231 VDG  233 (237)
T ss_dssp             EST
T ss_pred             ECC
Confidence            543

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=98.01  E-value=1.7e-05  Score=54.80  Aligned_cols=123  Identities=13%  Similarity=0.069  Sum_probs=78.3

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++.    +.+-.++|++||.++..+.                     .....|+.+|...+.+.+.+
T Consensus       106 ~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~l  164 (243)
T d1q7ba_         106 IETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGN---------------------GGQANYAAAKAGLIGFSKSL  164 (243)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             cceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCC---------------------CCCHHHHHHHHHHHHHHHHH
Confidence            5789999888888775    3355689999996554321                     13467999999999998876


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCcE-E
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGRY-L  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~-~  151 (178)
                      +.+   +|+++-.+.||.+-.+-....    ............|     ..-+...+|+|+++..++...  -..|.. .
T Consensus       165 A~ela~~gIrVN~I~PG~i~T~~~~~~----~~~~~~~~~~~~p-----l~R~~~pedvA~~v~fL~S~~s~~itGq~i~  235 (243)
T d1q7ba_         165 AREVASRGITVNVVAPGFIETDMTRAL----SDDQRAGILAQVP-----AGRLGGAQEIANAVAFLASDEAAYITGETLH  235 (243)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCHHHHTS----CHHHHHHHHTTCT-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhCccCeEEEEEecceEechhhhhh----hhhHHHHHHhcCC-----CCCCCCHHHHHHHHHHHhCchhcCCcCCeEE
Confidence            554   478899999998843221111    1111111222211     123567999999999988543  235544 4


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.|
T Consensus       236 vdG  238 (243)
T d1q7ba_         236 VNG  238 (243)
T ss_dssp             EST
T ss_pred             ECC
Confidence            544

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=97.96  E-value=5.7e-05  Score=52.00  Aligned_cols=105  Identities=18%  Similarity=0.183  Sum_probs=72.2

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+..+.+++.    +.+-.++|++||.++..+.                     .....|+.+|...+.+.+.+
T Consensus       113 ~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~---------------------~~~~~Y~asK~al~~lt~~l  171 (240)
T d2bd0a1         113 MNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF---------------------RHSSIYCMSKFGQRGLVETM  171 (240)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             CCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCC---------------------CCChHHHHHHHHHHHHHHHH
Confidence            6789999888777765    3455689999996554321                     13467999999999888776


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS  145 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  145 (178)
                      +.+   .|+++..+.||.+--+-....                  .......+...+|+|++++.++..+.
T Consensus       172 a~el~~~gIrvn~i~PG~v~T~~~~~~------------------~~~~~~~~~~PedvA~~v~~l~s~~~  224 (240)
T d2bd0a1         172 RLYARKCNVRITDVQPGAVYTPMWGKV------------------DDEMQALMMMPEDIAAPVVQAYLQPS  224 (240)
T ss_dssp             HHHHTTTTEEEEEEEECCBCSTTTCCC------------------CSTTGGGSBCHHHHHHHHHHHHTSCT
T ss_pred             HHHhCcCCeEEEEeeeCcccCchhhhc------------------CHhhHhcCCCHHHHHHHHHHHHcCCc
Confidence            544   578899999998843321110                  00112235668999999999987753

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.91  E-value=3.1e-05  Score=53.54  Aligned_cols=112  Identities=15%  Similarity=0.090  Sum_probs=73.5

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++.    +.+-.++|++||+++..+.                     .....|+.+|...+.+.+.+
T Consensus       107 ~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~---------------------~~~~~Y~asKaal~~ltk~l  165 (244)
T d1edoa_         107 IDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN---------------------IGQANYAAAKAGVIGFSKTA  165 (244)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCC---------------------CCCHHHHHHHHHHHHChHHH
Confidence            5789999888877765    3455689999997665431                     13467999999999998876


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      +.+   +|+++-.+.||.+-.+-...    ......+......|     ..-+...+|+|+++..+...
T Consensus       166 A~el~~~gIrvN~I~PG~i~T~~~~~----~~~~~~~~~~~~~p-----l~R~~~p~dvA~~v~fLa~S  225 (244)
T d1edoa_         166 AREGASRNINVNVVCPGFIASDMTAK----LGEDMEKKILGTIP-----LGRTGQPENVAGLVEFLALS  225 (244)
T ss_dssp             HHHHHTTTEEEEEEEECSBCSHHHHT----TCHHHHHHHHTSCT-----TCSCBCHHHHHHHHHHHHHC
T ss_pred             HHHHhhhCcEEEEEecceeccHHHHH----hhHHHHHHHHhcCC-----CCCCcCHHHHHHHHHHHHCC
Confidence            655   47899999999884321111    11112222222211     12256789999999988543

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.89  E-value=0.00012  Score=50.52  Aligned_cols=126  Identities=13%  Similarity=0.063  Sum_probs=74.0

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++.    +.+-.++|++||..+..+.                     .....|+.+|...+.+.+.+
T Consensus       108 ~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~ltk~l  166 (247)
T d2ew8a1         108 FEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI---------------------EAYTHYISTKAANIGFTRAL  166 (247)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC---------------------SSCHHHHHHHHHHHHHHHHH
T ss_pred             heeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccC---------------------cccccchhhhccHHHHHHHH
Confidence            6789999888887765    3455689999996543221                     23467999999999998876


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCc-EE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGR-YL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~  151 (178)
                      +.+   +|+++-.+.||.+-.+.....   ..............    ...-+...+|+|++++.++...  -..|. ..
T Consensus       167 A~ela~~gIrVN~I~PG~i~T~~~~~~---~~~~~~~~~~~~~~----~l~r~~~pedvA~~v~fL~S~~s~~itG~~i~  239 (247)
T d2ew8a1         167 ASDLGKDGITVNAIAPSLVRTATTEAS---ALSAMFDVLPNMLQ----AIPRLQVPLDLTGAAAFLASDDASFITGQTLA  239 (247)
T ss_dssp             HHHHGGGTEEEEEEEECCC---------------------CTTS----SSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHhcccCeEEEEEeeCCCCCcccccc---ccchhHHHHHHHhc----cCCCCCCHHHHHHHHHHHhCchhcCCcCCeEE
Confidence            654   478899999998854321111   00000111111111    1112557899999999888543  23554 44


Q ss_pred             EecC
Q 030406          152 CAES  155 (178)
Q Consensus       152 ~~~~  155 (178)
                      +.|.
T Consensus       240 vDGG  243 (247)
T d2ew8a1         240 VDGG  243 (247)
T ss_dssp             ESSS
T ss_pred             ECCC
Confidence            5443

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.87  E-value=0.00017  Score=49.74  Aligned_cols=118  Identities=15%  Similarity=0.127  Sum_probs=76.3

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++.    +.+-.++|++||+.+..+.                     .....|+.+|...+.+.+.+
T Consensus       108 ~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~---------------------~~~~~Y~asKaal~~ltk~l  166 (244)
T d1nffa_         108 LDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT---------------------VACHGYTATKFAVRGLTKST  166 (244)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred             hhcccchhhHHHHHHHhHHHhcCcceEEecccccccccc---------------------ccccchhhHHHHHHHHHHHH
Confidence            6789999888887664    3345689999996543221                     13467999999999998876


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~  151 (178)
                      +.+.   |+++-.+.||.+-.+-....            ......  ....-+..++|+|++++.++...  -..| .+.
T Consensus       167 A~el~~~gIrVN~I~PG~i~T~~~~~~------------~~~~~~--~pl~R~~~p~diA~~v~fL~s~~s~~itG~~i~  232 (244)
T d1nffa_         167 ALELGPSGIRVNSIHPGLVKTPMTDWV------------PEDIFQ--TALGRAAEPVEVSNLVVYLASDESSYSTGAEFV  232 (244)
T ss_dssp             HHHHGGGTEEEEEEEECCBCSGGGTTS------------CTTCSC--CSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhcccCEEEEEEeeCCccChhHhhh------------hHHHHh--ccccCCCCHHHHHHHHHHHhChhhCCCcCCEEE
Confidence            6544   78888999998854321100            000000  11223678999999999888543  3455 445


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.+
T Consensus       233 vDG  235 (244)
T d1nffa_         233 VDG  235 (244)
T ss_dssp             EST
T ss_pred             ECC
Confidence            544

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.86  E-value=0.00037  Score=47.86  Aligned_cols=122  Identities=15%  Similarity=0.116  Sum_probs=75.6

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++.+    .+...++++|| .+..+.                     .....|+.+|...+.+.+.+
T Consensus       105 ~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~---------------------~~~~~Y~asKaal~~ltk~l  162 (242)
T d1ulsa_         105 LRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGN---------------------LGQANYAASMAGVVGLTRTL  162 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhccccccccccceeeeecc-ccccCC---------------------CCCcchHHHHHHHHHHHHHH
Confidence            67899999888877764    34566777777 343211                     13467999999999998876


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCcE-E
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGRY-L  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~-~  151 (178)
                      +.+.   |+++-.+.||.+-.+-.... ...  .........      ...-+...+|+|+++..++...  -..|.. .
T Consensus       163 A~ela~~gIrVN~I~PG~v~T~~~~~~-~~~--~~~~~~~~~------pl~R~~~pedia~~v~fL~S~~s~~itG~~i~  233 (242)
T d1ulsa_         163 ALELGRWGIRVNTLAPGFIETRMTAKV-PEK--VREKAIAAT------PLGRAGKPLEVAYAALFLLSDESSFITGQVLF  233 (242)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCTTTSSS-CHH--HHHHHHHTC------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHhhhCcEEEEEeeCcccChhhhcC-CHH--HHHHHHhcC------CCCCCCCHHHHHHHHHHHhchhhCCCCCcEEE
Confidence            5444   78899999999865432221 111  111222111      1122556899999999888543  345544 4


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.|
T Consensus       234 vDG  236 (242)
T d1ulsa_         234 VDG  236 (242)
T ss_dssp             EST
T ss_pred             ECC
Confidence            533

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.85  E-value=0.00013  Score=50.55  Aligned_cols=127  Identities=17%  Similarity=0.147  Sum_probs=79.1

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++..    .+-.++|++||.++..+.                     .....|+.+|...+.+.+.+
T Consensus       115 ~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~l  173 (255)
T d1fmca_         115 YELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN---------------------INMTSYASSKAAASHLVRNM  173 (255)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhHHHHHhhhccccccccccccccchhccc---------------------cccccchhHHHHHHHHHHHH
Confidence            57899998888876653    345579999996443211                     23467999999999998876


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCc-EE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGR-YL  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~  151 (178)
                      +.+   +|+++-.+.||.+-.+.........  ......... |     ..-+..++|+|++++.++...  -..|. ..
T Consensus       174 A~el~~~gIrVN~I~PG~i~T~~~~~~~~~e--~~~~~~~~~-p-----l~R~g~pedvA~~v~fL~S~~s~~itG~~i~  245 (255)
T d1fmca_         174 AFDLGEKNIRVNGIAPGAILTDALKSVITPE--IEQKMLQHT-P-----IRRLGQPQDIANAALFLCSPAASWVSGQILT  245 (255)
T ss_dssp             HHHHHTTTEEEEEEEECSBCSHHHHTTCCHH--HHHHHHHTC-S-----SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhCccCeEEEEeeeCcCcChHhhccCCHH--HHHHHHhcC-C-----CCCCcCHHHHHHHHHHHhCchhcCCcCCEEE
Confidence            654   4788999999988543211111111  111222111 1     112467899999999988543  34554 45


Q ss_pred             EecCcc
Q 030406          152 CAESVL  157 (178)
Q Consensus       152 ~~~~~~  157 (178)
                      +.|..+
T Consensus       246 vDGG~~  251 (255)
T d1fmca_         246 VSGGGV  251 (255)
T ss_dssp             ESTTSC
T ss_pred             ECcCcc
Confidence            655443

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.83  E-value=0.00021  Score=49.66  Aligned_cols=125  Identities=14%  Similarity=0.159  Sum_probs=76.5

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++.    +.+..++|++||+++..+.                     .....|+.+|...+.+.+.+
T Consensus       112 ~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~---------------------~~~~~Y~~sK~al~~lt~~l  170 (258)
T d1ae1a_         112 MGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL---------------------PSVSLYSASKGAINQMTKSL  170 (258)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             hhhcccccccccccccccccccccccccccccccccccc---------------------ccchhHHHHHHHHHHHHHHH
Confidence            5789999888877665    3456799999996543221                     13467999999999998877


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCCh---hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC--CCCCCc
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVN---ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET--PSASGR  149 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~~~  149 (178)
                      +.+.   |+.+-.+.||.+..+.......   .....+.......      ...-+...+|+|+++..++..  .-..|.
T Consensus       171 A~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~------plgR~~~pediA~~v~fL~S~~s~~itG~  244 (258)
T d1ae1a_         171 ACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT------PMGRAGKPQEVSALIAFLCFPAASYITGQ  244 (258)
T ss_dssp             HHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHS------TTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcC------CCCCCcCHHHHHHHHHHHhChhhCCCcCc
Confidence            6554   6888899999996543211100   0111111111111      112267899999999999843  334564


Q ss_pred             E-EEe
Q 030406          150 Y-LCA  153 (178)
Q Consensus       150 ~-~~~  153 (178)
                      . .+.
T Consensus       245 ~i~vD  249 (258)
T d1ae1a_         245 IIWAD  249 (258)
T ss_dssp             EEEES
T ss_pred             EEEeC
Confidence            4 443

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.82  E-value=0.00013  Score=50.52  Aligned_cols=127  Identities=12%  Similarity=0.036  Sum_probs=77.9

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++.    +.+-.++|++||.++..+.                     .....|+.+|...+.+.+.+
T Consensus       100 ~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~l  158 (252)
T d1zmta1         100 VEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW---------------------KELSTYTSARAGACTLANAL  158 (252)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHhhcccccceeeccccccccccc---------------------ccccccccccccHHHHHHHH
Confidence            5688888888777664    3455689999996443211                     13357999999999998876


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChh----hHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNA----SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASG  148 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~  148 (178)
                      +.+   +|+++-.+.||.+-.+........    ............. ..+    -+...+|+|++++.++....  ..|
T Consensus       159 A~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~-pl~----R~g~pedvA~~v~fL~S~~s~~iTG  233 (252)
T d1zmta1         159 SKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVT-ALQ----RLGTQKELGELVAFLASGSCDYLTG  233 (252)
T ss_dssp             HHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHS-SSS----SCBCHHHHHHHHHHHHTTSCGGGTT
T ss_pred             HHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcC-CCC----CCcCHHHHHHHHHHHhCchhcCCcC
Confidence            544   479999999999865432221100    0011111111111 111    25679999999999986543  345


Q ss_pred             cE-EEec
Q 030406          149 RY-LCAE  154 (178)
Q Consensus       149 ~~-~~~~  154 (178)
                      .. .+.|
T Consensus       234 ~~i~vdG  240 (252)
T d1zmta1         234 QVFWLAG  240 (252)
T ss_dssp             CEEEEST
T ss_pred             CeEEECC
Confidence            44 4543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.79  E-value=0.00013  Score=49.89  Aligned_cols=124  Identities=23%  Similarity=0.166  Sum_probs=77.5

Q ss_pred             chhHHHHHHHHHHHHHh----------CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----------AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE   71 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----------~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E   71 (178)
                      +++|+.++..++..+..          .+-.++|++||..+..+.                     .....|+.+|...+
T Consensus        97 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~---------------------~~~~~Y~asKaal~  155 (241)
T d1uaya_          97 LEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ---------------------IGQAAYAASKGGVV  155 (241)
T ss_dssp             HHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC---------------------TTCHHHHHHHHHHH
T ss_pred             HHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCC---------------------CCchhhHHHHHHHH
Confidence            46777777776665532          133589999997554431                     23467999999999


Q ss_pred             HHHHHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCC
Q 030406           72 KAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASG  148 (178)
Q Consensus        72 ~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~  148 (178)
                      .+.+.++.+   +|+++-.+.||.+-.+.....   ... .........+..+    -+...+|+|++++.++...-..|
T Consensus       156 ~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~---~~~-~~~~~~~~~~~~~----R~g~pedvA~~v~fL~s~~~iTG  227 (241)
T d1uaya_         156 ALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL---PEK-AKASLAAQVPFPP----RLGRPEEYAALVLHILENPMLNG  227 (241)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS---CHH-HHHHHHTTCCSSC----SCCCHHHHHHHHHHHHHCTTCCS
T ss_pred             HHHHHHHHHHhhcCCceeeecCCcccccccchh---hhh-HHHHHHhcCCCCC----CCcCHHHHHHHHHHHHhCCCCCC
Confidence            998877654   478899999998854321111   111 1122222222222    24468999999999988655566


Q ss_pred             cE-EEec
Q 030406          149 RY-LCAE  154 (178)
Q Consensus       149 ~~-~~~~  154 (178)
                      .. .+.|
T Consensus       228 ~~i~VDG  234 (241)
T d1uaya_         228 EVVRLDG  234 (241)
T ss_dssp             CEEEEST
T ss_pred             CEEEECC
Confidence            44 4543

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.78  E-value=5.7e-05  Score=52.49  Aligned_cols=124  Identities=12%  Similarity=0.040  Sum_probs=78.5

Q ss_pred             chhHHHHHHHHHHHHHh----C---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----A---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAA   74 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~   74 (178)
                      +++|+.|+.++..++..    .   ...++|++||.++..+.                     .....|+.+|.....+.
T Consensus       104 ~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~---------------------~~~~~Y~asKaal~~~t  162 (254)
T d1sbya1         104 IAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI---------------------HQVPVYSASKAAVVSFT  162 (254)
T ss_dssp             HHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC---------------------TTSHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCC---------------------CCCHHHHHHHHHHHHHH
Confidence            57899998888877653    1   23579999996554321                     23467999999999988


Q ss_pred             HHHHHh---cCCcEEEecCCceeCCCCC--CCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCCCCCc
Q 030406           75 WEEAVA---RGVDLVVVNPVLVLGPLLQ--STVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPSASGR  149 (178)
Q Consensus        75 ~~~~~~---~~~~~~i~R~~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~  149 (178)
                      +.++.+   .|+.+..+.||.|..+-..  .........+...         ...+.....+++|++++.+++....+..
T Consensus       163 ~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~e~va~~~~~~~~~~~tG~v  233 (254)
T d1sbya1         163 NSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAEL---------LLSHPTQTSEQCGQNFVKAIEANKNGAI  233 (254)
T ss_dssp             HHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHH---------HTTSCCEEHHHHHHHHHHHHHHCCTTCE
T ss_pred             HHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhc---------cccCCCCCHHHHHHHHHHhhhCCCCCCE
Confidence            776554   4799999999999643100  0000000000111         1122345789999999988877654446


Q ss_pred             EEEecC
Q 030406          150 YLCAES  155 (178)
Q Consensus       150 ~~~~~~  155 (178)
                      +.+.+.
T Consensus       234 i~vdgG  239 (254)
T d1sbya1         234 WKLDLG  239 (254)
T ss_dssp             EEEETT
T ss_pred             EEECCC
Confidence            667553

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.77  E-value=0.00018  Score=49.86  Aligned_cols=121  Identities=16%  Similarity=0.070  Sum_probs=75.4

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++.    +.+-.++|++||.++..+.                     .....|+.+|...+.+.+.+
T Consensus       107 ~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~l  165 (254)
T d1hdca_         107 VEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL---------------------ALTSSYGASKWGVRGLSKLA  165 (254)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             hhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccc---------------------cchhhHHHHHHHHHHHHHHH
Confidence            5789999888887775    3455799999996554321                     23467999999999998877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCc-cccCCC--CcccccHHHHHHHHHHhhcCC--CCCC-
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSA-KTYANS--VQAYVHVRDVALAHILVYETP--SASG-  148 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~i~v~D~a~~~~~~~~~~--~~~~-  148 (178)
                      +.+   +|+++-.+.||.+-.+-        .   ........ ......  .+-....+|+|++++.++...  -..| 
T Consensus       166 A~e~a~~gIrVN~I~PG~v~T~~--------~---~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG~  234 (254)
T d1hdca_         166 AVELGTDRIRVNSVHPGMTYTPM--------T---AETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGA  234 (254)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCHH--------H---HHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHhCCCceEEEEeeeCcccCcc--------c---hhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCCc
Confidence            654   47888999999884321        1   11110110 001111  111235799999999888543  2455 


Q ss_pred             cEEEec
Q 030406          149 RYLCAE  154 (178)
Q Consensus       149 ~~~~~~  154 (178)
                      .+.+.+
T Consensus       235 ~i~vDG  240 (254)
T d1hdca_         235 ELAVDG  240 (254)
T ss_dssp             EEEEST
T ss_pred             eEEeCC
Confidence            445544

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.76  E-value=9.7e-05  Score=51.41  Aligned_cols=120  Identities=15%  Similarity=0.182  Sum_probs=66.4

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++.    +.+-.++|++||+.+..+.                     .....|+.+|...+.+.+.+
T Consensus       114 ~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~l  172 (259)
T d1xq1a_         114 ISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA---------------------SVGSIYSATKGALNQLARNL  172 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------------------------------CCHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhheeeehhhhhcccccccccccccccccccccc---------------------cccccccccccchhhhhHHH
Confidence            5789999888887765    3455689999996543321                     23467999999999988776


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC--CCCCCcE
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET--PSASGRY  150 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~~~~  150 (178)
                      +.+   +|+++-.+.||.+-.+-.....   .....+......     ...-+...+|+|++++.++..  .-..|..
T Consensus       173 A~e~~~~gIrVN~V~PG~i~T~~~~~~~---~~~~~~~~~~~~-----pl~R~~~pedvA~~v~fL~S~~s~~iTG~~  242 (259)
T d1xq1a_         173 ACEWASDGIRANAVAPAVIATPLAEAVY---DDEFKKVVISRK-----PLGRFGEPEEVSSLVAFLCMPAASYITGQT  242 (259)
T ss_dssp             HHHHGGGTCEEEEEECCSCC---------------------------------CCGGGGHHHHHHHTSGGGTTCCSCE
T ss_pred             HHHhcccCeEEEEeccCcccCHHhhhhc---hHHHHHHHHhCC-----CCCCCcCHHHHHHHHHHHhCchhcCCcCcE
Confidence            554   4789999999988543211100   000111111111     011245689999999988843  3335544

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.75  E-value=0.00042  Score=47.74  Aligned_cols=127  Identities=11%  Similarity=0.079  Sum_probs=76.7

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++.++.+++..    .+-.++|++||.++..+.                     .....|+.+|...+.+.+.+
T Consensus       104 ~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~---------------------~~~~~Y~asKaal~~ltk~l  162 (248)
T d2d1ya1         104 LEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE---------------------QENAAYNASKGGLVNLTRSL  162 (248)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC---------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred             HHhhhhhHhhhhhhhcccccccccccccccccccccccc---------------------cccchhHHHHHHHHHHHHHH
Confidence            57899999888887753    455689999996554321                     24467999999999998776


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCC--ChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCc-
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQST--VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGR-  149 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-  149 (178)
                      +.+   +|+++-.+.||.+-.+.....  .........+......     ...-+...+|+++++..++...  -..|. 
T Consensus       163 A~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-----pl~R~~~pedia~~v~fL~S~~s~~itG~~  237 (248)
T d2d1ya1         163 ALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLH-----ALRRLGKPEEVAEAVLFLASEKASFITGAI  237 (248)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTS-----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHhCchhcCCCCcE
Confidence            554   478888999998843210000  0000000111111111     1123567999999999988543  23554 


Q ss_pred             EEEec
Q 030406          150 YLCAE  154 (178)
Q Consensus       150 ~~~~~  154 (178)
                      +.+.|
T Consensus       238 i~vDG  242 (248)
T d2d1ya1         238 LPVDG  242 (248)
T ss_dssp             EEEST
T ss_pred             EEcCc
Confidence            45543

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.73  E-value=0.00067  Score=46.96  Aligned_cols=127  Identities=13%  Similarity=0.117  Sum_probs=77.6

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++.    +.+-.++|++||.++..+.                     .....|+.+|...+.+.+.+
T Consensus       112 ~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~l  170 (258)
T d1iy8a_         112 VSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI---------------------GNQSGYAAAKHGVVGLTRNS  170 (258)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC---------------------SSBHHHHHHHHHHHHHHHHH
T ss_pred             hhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCC---------------------CCchHHHHHHHHHHHHHHHH
Confidence            6789999998888764    3355689999996554321                     23467999999999998876


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCC----hhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTV----NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG  148 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~  148 (178)
                      +.+   +|+++-.+.||.+..+-.....    ...............     ...-+...+|+|++++.++...  -..|
T Consensus       171 A~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-----pl~R~~~p~dvA~~v~fL~S~~s~~itG  245 (258)
T d1iy8a_         171 AVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVN-----PSKRYGEAPEIAAVVAFLLSDDASYVNA  245 (258)
T ss_dssp             HHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTC-----TTCSCBCHHHHHHHHHHHTSGGGTTCCS
T ss_pred             HHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence            554   4799999999988533100000    000011111111111     1122567999999999888543  3355


Q ss_pred             cE-EEec
Q 030406          149 RY-LCAE  154 (178)
Q Consensus       149 ~~-~~~~  154 (178)
                      .. .+.|
T Consensus       246 ~~i~VDG  252 (258)
T d1iy8a_         246 TVVPIDG  252 (258)
T ss_dssp             CEEEEST
T ss_pred             ceEEcCc
Confidence            43 4533

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.70  E-value=0.00019  Score=49.91  Aligned_cols=131  Identities=12%  Similarity=0.091  Sum_probs=74.7

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++.    +.+-.++|++||.++..+.                     .....|+.+|...+.+.+.+
T Consensus       111 ~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~l  169 (260)
T d1x1ta1         111 LALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS---------------------ANKSAYVAAKHGVVGFTKVT  169 (260)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             hhccccccccccchhhhhHhhcCCceEeecccccceecc---------------------CCcchhhhhhhhHHHhHHHH
Confidence            5789888887777664    3455689999996554321                     13467999999999998877


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHH--HHH--HHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASII--HIL--KYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG  148 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~  148 (178)
                      +.+   +|+.+..+.||.+-.+-..........  ...  ....... .......-+...+|+|++++.++...  -..|
T Consensus       170 A~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Pl~R~g~pediA~~v~fL~S~~a~~itG  248 (260)
T d1x1ta1         170 ALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELL-SEKQPSLQFVTPEQLGGTAVFLASDAAAQITG  248 (260)
T ss_dssp             HHHHTTTTEEEEEEEECCBCC------------------------CH-HHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHH-HhcCCCCCCcCHHHHHHHHHHHhChhhCCCcC
Confidence            655   478888999998854321110000000  000  0000000 00001123567999999999888543  3455


Q ss_pred             cE-EEec
Q 030406          149 RY-LCAE  154 (178)
Q Consensus       149 ~~-~~~~  154 (178)
                      .. .+.|
T Consensus       249 ~~i~vDG  255 (260)
T d1x1ta1         249 TTVSVDG  255 (260)
T ss_dssp             CEEEEST
T ss_pred             CEEEECc
Confidence            44 4543

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.66  E-value=0.00033  Score=48.39  Aligned_cols=124  Identities=14%  Similarity=0.095  Sum_probs=75.9

Q ss_pred             chhHHHHHHHHHHHHH----hCCC-CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++..+.+++.    +.+. .++|++||+.+..+.                     .....|+.+|...+.+.+.
T Consensus       110 ~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~  168 (251)
T d1zk4a1         110 LAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD---------------------PSLGAYNASKGAVRIMSKS  168 (251)
T ss_dssp             HHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHH
T ss_pred             ccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccC---------------------CCchhHHHHHHHHhcchHH
Confidence            6789999988888765    3343 378999996543221                     1346799999999998776


Q ss_pred             HHH-----hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCc
Q 030406           77 EAV-----ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGR  149 (178)
Q Consensus        77 ~~~-----~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~  149 (178)
                      ++.     .+|+++-.+.||.+-.+......  ....... .... ..    ..-+...+|+|++++.++...  -..|.
T Consensus       169 lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~--~~~~~~~-~~~~-~p----l~R~~~pedvA~~v~fL~S~~s~~itG~  240 (251)
T d1zk4a1         169 AALDCALKDYDVRVNTVHPGYIKTPLVDDLP--GAEEAMS-QRTK-TP----MGHIGEPNDIAYICVYLASNESKFATGS  240 (251)
T ss_dssp             HHHHHHHTTCSEEEEEEEECCBCCHHHHTST--THHHHHT-STTT-CT----TSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHhcCCCcEEEEEEeCCCCCChhHHhcC--CHHHHHH-HHhC-CC----CCCCcCHHHHHHHHHHHhCchhCCCcCc
Confidence            553     45789999999988543211100  0000000 0011 11    122667999999999888543  23554


Q ss_pred             E-EEec
Q 030406          150 Y-LCAE  154 (178)
Q Consensus       150 ~-~~~~  154 (178)
                      . .+.|
T Consensus       241 ~i~vDG  246 (251)
T d1zk4a1         241 EFVVDG  246 (251)
T ss_dssp             EEEEST
T ss_pred             EEEECc
Confidence            4 4543

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.65  E-value=0.00072  Score=46.88  Aligned_cols=125  Identities=11%  Similarity=0.044  Sum_probs=75.6

Q ss_pred             chhHHHHHHHHHHHHH----hCCC-CEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKV-RRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++..+.+++.    +.+. ..+|++||.++..+.                     .....|+.+|...+.+.+.
T Consensus       113 ~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~  171 (261)
T d1geea_         113 IDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW---------------------PLFVHYAASKGGMKLMTET  171 (261)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHH
T ss_pred             HHHhcccchhHHHHHhhhhccccccccccccccchhcccC---------------------ccccccccCCccchhhHHH
Confidence            6789999888776654    4443 458899996443211                     1346799999999999877


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cE
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RY  150 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~  150 (178)
                      ++.+   +|+.+-.+.||.+-.+-....  ..-...........|     ..-+...+|+|++++.++...  -..| .+
T Consensus       172 lA~e~~~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~~~~p-----l~R~~~pediA~~v~fL~S~~s~~itG~~i  244 (261)
T d1geea_         172 LALEYAPKGIRVNNIGPGAINTPINAEK--FADPEQRADVESMIP-----MGYIGEPEEIAAVAAWLASSEASYVTGITL  244 (261)
T ss_dssp             HHHHHGGGTCEEEEEEECSBCSGGGHHH--HHSHHHHHHHHTTCT-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHhhhhCcEEEEEeeCcCcCHhHhhh--cCCHHHHHHHHhcCC-----CCCCCCHHHHHHHHHHHhCchhcCCcCCeE
Confidence            6544   478999999998854321100  000111122222211     112567899999999888543  2355 44


Q ss_pred             EEec
Q 030406          151 LCAE  154 (178)
Q Consensus       151 ~~~~  154 (178)
                      .+.+
T Consensus       245 ~vDG  248 (261)
T d1geea_         245 FADG  248 (261)
T ss_dssp             EEST
T ss_pred             EECC
Confidence            4543

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.64  E-value=0.00075  Score=46.50  Aligned_cols=126  Identities=12%  Similarity=0.062  Sum_probs=76.7

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++..    .+-.++|++||..+...                    +......|+.+|...+.+.+.+
T Consensus       111 ~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~--------------------~~~~~~~Y~asKaal~~lt~~l  170 (251)
T d1vl8a_         111 IEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV--------------------TMPNISAYAASKGGVASLTKAL  170 (251)
T ss_dssp             HHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC--------------------CSSSCHHHHHHHHHHHHHHHHH
T ss_pred             HHhhhhhhhhhhhhhhhcccccccccccccccchhccc--------------------cCccccchHHHHHhHHHHHHHH
Confidence            57899998888877653    45569999998433211                    0123467999999999998876


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCcE-E
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGRY-L  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~-~  151 (178)
                      +.+   +|+++-.+.||.+-.+..... .............. |     ..-+..++|+|++++.++...  -..|.. .
T Consensus       171 A~e~~~~gIrVN~I~PG~i~T~~~~~~-~~~~~~~~~~~~~~-p-----l~R~~~pedvA~~v~fL~S~~a~~itG~~i~  243 (251)
T d1vl8a_         171 AKEWGRYGIRVNVIAPGWYRTKMTEAV-FSDPEKLDYMLKRI-P-----LGRTGVPEDLKGVAVFLASEEAKYVTGQIIF  243 (251)
T ss_dssp             HHHHGGGTCEEEEEEECCBCSTTTHHH-HTCHHHHHHHHHTC-T-----TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhcccCeEEEEEeeCcccCHHHHhc-cCCHHHHHHHHhcC-C-----CCCCCCHHHHHHHHHHHhCchhCCCcCcEEE
Confidence            554   479999999998854321110 00011111222211 1     112456899999999888543  235544 4


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.|
T Consensus       244 vDG  246 (251)
T d1vl8a_         244 VDG  246 (251)
T ss_dssp             EST
T ss_pred             eCc
Confidence            543

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.62  E-value=0.0012  Score=45.59  Aligned_cols=127  Identities=17%  Similarity=0.098  Sum_probs=75.4

Q ss_pred             chhHHHHHHHHHHHHHh----C-CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----A-KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++.++++++..    . +..++|++||.++..+                     ......|+.+|...+.+.+.
T Consensus       106 ~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~---------------------~~~~~~Y~asKaal~~ltk~  164 (255)
T d1gega_         106 YNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG---------------------NPELAVYSSSKFAVRGLTQT  164 (255)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC---------------------CTTBHHHHHHHHHHHHHHHH
T ss_pred             hhhcccchhhhhhhhcchhhhhccccccccccchhhccc---------------------CcccccchhCHHHHHhhHHH
Confidence            67899999988877542    2 3467999999644321                     12346799999999999887


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCcccc------CC-CCcccccHHHHHHHHHHhhcCC--
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTY------AN-SVQAYVHVRDVALAHILVYETP--  144 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~i~v~D~a~~~~~~~~~~--  144 (178)
                      ++.+   +|+++-.+.||.+-.+-..    ......... .+.....      .. ...-+...+|+|++++.++...  
T Consensus       165 lA~el~~~gIrVN~I~PG~i~T~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~  239 (255)
T d1gega_         165 AARDLAPLGITVNGYCPGIVKTPMWA----EIDRQVSEA-AGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSD  239 (255)
T ss_dssp             HHHHHGGGTEEEEEEEECSBSSHHHH----HHHHHHHHH-HTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHhhhhCcEEEEEecCcccChHHh----hhhhhhHhh-hcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhC
Confidence            6544   4788889999988432100    000111111 1111000      00 1122567999999999888543  


Q ss_pred             CCCCcE-EEec
Q 030406          145 SASGRY-LCAE  154 (178)
Q Consensus       145 ~~~~~~-~~~~  154 (178)
                      -..|.. .+.|
T Consensus       240 ~itG~~i~vDG  250 (255)
T d1gega_         240 YMTGQSLLIDG  250 (255)
T ss_dssp             TCCSCEEEESS
T ss_pred             CccCcEEEecC
Confidence            235544 4544

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.59  E-value=0.00064  Score=46.88  Aligned_cols=124  Identities=12%  Similarity=0.032  Sum_probs=74.5

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++..+++++...  +-.++|++||..+..+.                     .....|+.+|...+.+.+.++.
T Consensus       118 ~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~ltr~lA~  176 (256)
T d1ulua_         118 LEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV---------------------PKYNVMAIAKAALEASVRYLAY  176 (256)
T ss_dssp             HHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC---------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCC---------------------CCchHHHHHHHHHHHHHHHHHH
Confidence            578899999988887653  22579999996443221                     2346799999999999887665


Q ss_pred             h---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--CCCcE-EEe
Q 030406           80 A---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--ASGRY-LCA  153 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~-~~~  153 (178)
                      +   +|+++-.+.||.+..+...... ..........+.. |     ..-+...+|+|++++.++....  ..|.. .+.
T Consensus       177 ela~~gIrVN~I~PG~i~t~~~~~~~-~~~~~~~~~~~~~-p-----l~R~~~pedvA~~v~fL~S~~s~~itG~~i~VD  249 (256)
T d1ulua_         177 ELGPKGVRVNAISAGPVRTVAARSIP-GFTKMYDRVAQTA-P-----LRRNITQEEVGNLGLFLLSPLASGITGEVVYVD  249 (256)
T ss_dssp             HHGGGTCEEEEEEECCC-----------CHHHHHHHHHHS-T-----TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HhcccCCEEeeeccceeeeccccchh-hhHHHHHHHHhcC-C-----CCCCcCHHHHHHHHHHHhCchhCCccCCeEEEC
Confidence            4   4789999999988654322110 0111111111111 1     1225568999999998886432  35544 453

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.58  E-value=0.00025  Score=50.39  Aligned_cols=129  Identities=13%  Similarity=0.064  Sum_probs=83.4

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+++++.    +.+-.+||++||.++.++.                     .....|+.+|...+.+.+.+
T Consensus       118 ~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~l  176 (302)
T d1gz6a_         118 QRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN---------------------FGQANYSAAKLGLLGLANTL  176 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             hceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCC---------------------CCcHHHHHHHHHHHHHHHHH
Confidence            6789999988888765    3455699999997666542                     13467999999999998876


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC-CCCC-cEEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP-SASG-RYLC  152 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-~~~~-~~~~  152 (178)
                      +.+.   |+.+..+.|+.+--... ..   ...               ....++..+|+|++++.++... ...| .+.+
T Consensus       177 a~E~~~~gIrVN~I~PG~~~t~~~-~~---~~~---------------~~~~~~~PedvA~~v~fL~S~~a~itG~~i~v  237 (302)
T d1gz6a_         177 VIEGRKNNIHCNTIAPNAGSRMTE-TV---MPE---------------DLVEALKPEYVAPLVLWLCHESCEENGGLFEV  237 (302)
T ss_dssp             HHHTGGGTEEEEEEEEECCSTTTG-GG---SCH---------------HHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEE
T ss_pred             HHHHhccCCceeeeCCCCCCcchh-hc---CcH---------------hhHhcCCHHHHHHHHHHHcCCCcCCCCcEEEe
Confidence            6554   78888899986621110 00   000               1112334789999998887532 1222 2222


Q ss_pred             e--------------------cCccCHHHHHHHHHHhC
Q 030406          153 A--------------------ESVLHRGEVVEILAKFF  170 (178)
Q Consensus       153 ~--------------------~~~~s~~e~~~~i~~~~  170 (178)
                      .                    +.+.|..++++...+..
T Consensus       238 dGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~  275 (302)
T d1gz6a_         238 GAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKIC  275 (302)
T ss_dssp             ETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHT
T ss_pred             CCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHh
Confidence            1                    23567788888887754

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=0.0009  Score=45.88  Aligned_cols=125  Identities=17%  Similarity=0.140  Sum_probs=77.0

Q ss_pred             chhHHHHHHHHHHHHHh-----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE-----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~-----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++..+.+++.+     .+-.++|++||.++..+                     ......|+.+|...+.+.+.
T Consensus       104 ~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~---------------------~~~~~~Y~asKaal~~lt~~  162 (244)
T d1pr9a_         104 FEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA---------------------VTNHSVYCSTKGALDMLTKV  162 (244)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC---------------------CTTBHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccc---------------------ccchhhhhhhHHHHHHHHHH
Confidence            57889988877776542     34568999999644321                     12346799999999999887


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCcE-
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGRY-  150 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~-  150 (178)
                      ++.+   .|+++-.+.||.+-.+-..... .... ..+......|     ..-+...+|+|+++..++...  -..|.. 
T Consensus       163 lA~el~~~gIrvN~I~PG~v~T~~~~~~~-~~~~-~~~~~~~~~p-----l~R~~~peevA~~v~fL~S~~a~~itG~~i  235 (244)
T d1pr9a_         163 MALELGPHKIRVNAVNPTVVMTSMGQATW-SDPH-KAKTMLNRIP-----LGKFAEVEHVVNAILFLLSDRSGMTTGSTL  235 (244)
T ss_dssp             HHHHHGGGTEEEEEEEECCBCSHHHHTTS-CSHH-HHHHHHTTCT-----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHhCCCcEEEEEEeeCcCcChHHhhhc-cChH-HHHHHHhcCC-----CCCCcCHHHHHHHHHHHhCchhCCcCCcEE
Confidence            7654   4788999999988543211110 0111 1122222211     123667999999999888543  345544 


Q ss_pred             EEec
Q 030406          151 LCAE  154 (178)
Q Consensus       151 ~~~~  154 (178)
                      .+.|
T Consensus       236 ~vDG  239 (244)
T d1pr9a_         236 PVEG  239 (244)
T ss_dssp             EEST
T ss_pred             EECc
Confidence            4543

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.56  E-value=0.00047  Score=47.82  Aligned_cols=126  Identities=13%  Similarity=0.118  Sum_probs=77.5

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++.    +.+-.++|++||..+..+.                     .....|+.+|...+.+.+.+
T Consensus       114 ~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~l  172 (259)
T d2ae2a_         114 MSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV---------------------PYEAVYGATKGAMDQLTRCL  172 (259)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HhcccceeEEEEeeccchhhhhccccccccccccccccc---------------------ccccchHHHHHHHHHHHHHH
Confidence            5789999888877665    3455689999996443211                     23467999999999998887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCC--CChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCcE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQS--TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGRY  150 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~  150 (178)
                      +.+.   |+++-.+.||.+-.+....  ........+.+.....+      ..-+...+|+|++++.++...  -..|..
T Consensus       173 A~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~p------l~R~g~pedvA~~v~fL~S~~s~~itG~~  246 (259)
T d2ae2a_         173 AFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA------LRRMGEPKELAAMVAFLCFPAASYVTGQI  246 (259)
T ss_dssp             HHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST------TCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCchhCCCcCcE
Confidence            6654   7888889999885332100  00001111122221111      112567899999999888543  235544


Q ss_pred             -EEec
Q 030406          151 -LCAE  154 (178)
Q Consensus       151 -~~~~  154 (178)
                       .+.+
T Consensus       247 i~VDG  251 (259)
T d2ae2a_         247 IYVDG  251 (259)
T ss_dssp             EEEST
T ss_pred             EEECC
Confidence             4544

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.56  E-value=0.0017  Score=44.71  Aligned_cols=127  Identities=15%  Similarity=0.151  Sum_probs=75.8

Q ss_pred             chhHHHHHHHHHHHHHh-----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE-----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~-----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++..+.+++..     .+-.++|++||.++..+.                     .....|+.+|...+.+.+.
T Consensus       107 ~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~  165 (256)
T d1k2wa_         107 FAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGE---------------------ALVGVYCATKAAVISLTQS  165 (256)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHHH
T ss_pred             hceeeeccccchhhccchhHHhccCCccccccchhhcccc---------------------ccccchhhhhhHHHHHHHH
Confidence            67899999888876442     234689999996443221                     2346799999999999877


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccc-----c--CCCCcccccHHHHHHHHHHhhcCC--
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKT-----Y--ANSVQAYVHVRDVALAHILVYETP--  144 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~i~v~D~a~~~~~~~~~~--  144 (178)
                      ++.+   +|+++-.+.||.+-.+....    ........ .+....     .  .....-+...+|+|++++.++...  
T Consensus       166 lA~el~~~gIrVN~V~PG~i~T~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S~~a~  240 (256)
T d1k2wa_         166 AGLNLIRHGINVNAIAPGVVDGEHWDG----VDAKFADY-ENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEAD  240 (256)
T ss_dssp             HHHHHGGGTEEEEEEEECCBCCTTHHH----HHHHHHHH-HTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTSGGGT
T ss_pred             HHHHhcccCeEEEEEecCCCCchhhhh----hhhhhhhh-ccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhC
Confidence            6644   47889999999885432110    11111110 010000     0  001122567999999999887543  


Q ss_pred             CCCC-cEEEec
Q 030406          145 SASG-RYLCAE  154 (178)
Q Consensus       145 ~~~~-~~~~~~  154 (178)
                      -..| .+.+.|
T Consensus       241 ~iTG~~i~vDG  251 (256)
T d1k2wa_         241 YIVAQTYNVDG  251 (256)
T ss_dssp             TCCSCEEEEST
T ss_pred             CccCceEEECc
Confidence            3355 445644

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.55  E-value=0.00031  Score=48.68  Aligned_cols=127  Identities=17%  Similarity=0.121  Sum_probs=77.4

Q ss_pred             chhHHHHHHHHHHHHHh------CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE------AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW   75 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~------~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~   75 (178)
                      +++|+.++..+.+++..      .+..++|++||..+..+.                     .....|+.+|...+.+.+
T Consensus       107 ~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~---------------------~~~~~Y~asKaal~~ltk  165 (257)
T d2rhca1         107 VETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV---------------------VHAAPYSASKHGVVGFTK  165 (257)
T ss_dssp             HHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccc---------------------ccchhHHHHHHHHHHHHH
Confidence            68999999999998854      244589999996443321                     134679999999999998


Q ss_pred             HHHHhc---CCcEEEecCCceeCCCCCCC-------ChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC-
Q 030406           76 EEAVAR---GVDLVVVNPVLVLGPLLQST-------VNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP-  144 (178)
Q Consensus        76 ~~~~~~---~~~~~i~R~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-  144 (178)
                      .++.+.   |+++-.+.||.+-.+-....       ................     ...-+...+|+|++++.++... 
T Consensus       166 ~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-----PlgR~~~pedia~~v~fL~S~~s  240 (257)
T d2rhca1         166 ALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARV-----PIGRYVQPSEVAEMVAYLIGPGA  240 (257)
T ss_dssp             HHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS-----TTSSCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHhCchh
Confidence            877764   57788899998842210000       0000011111111111     1112567999999999988533 


Q ss_pred             -CCCCcE-EEec
Q 030406          145 -SASGRY-LCAE  154 (178)
Q Consensus       145 -~~~~~~-~~~~  154 (178)
                       -..|.. .+.|
T Consensus       241 ~~itG~~i~vDG  252 (257)
T d2rhca1         241 AAVTAQALNVCG  252 (257)
T ss_dssp             TTCCSCEEEEST
T ss_pred             cCCcCceEEECc
Confidence             345544 4544

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.54  E-value=0.00024  Score=48.47  Aligned_cols=104  Identities=12%  Similarity=0.054  Sum_probs=69.4

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++..+.+++...  +-.++|++||.++..+.                     .....|+.+|.+.+.+.+.++.
T Consensus       100 ~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~l~~~la~  158 (235)
T d1ooea_         100 IKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT---------------------PSMIGYGMAKAAVHHLTSSLAA  158 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC---------------------TTBHHHHHHHHHHHHHHHHHHS
T ss_pred             hhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCc---------------------ccccchHHHHHHHHHHHHHHHH
Confidence            578999998888888653  22589999996544321                     1346799999999999999876


Q ss_pred             hc-----CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           80 AR-----GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        80 ~~-----~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      +.     ++.+..+.|+.+--+        .   .......      .....++..+|+++.++..+..
T Consensus       159 e~~~~~~~i~v~~i~Pg~~~T~--------~---~~~~~~~------~~~~~~~~~~~va~~~~~~l~~  210 (235)
T d1ooea_         159 KDSGLPDNSAVLTIMPVTLDTP--------M---NRKWMPN------ADHSSWTPLSFISEHLLKWTTE  210 (235)
T ss_dssp             TTSSCCTTCEEEEEEESCBCCH--------H---HHHHSTT------CCGGGCBCHHHHHHHHHHHHHC
T ss_pred             HhccCCCceEEEEEecCcCcCc--------c---hhhhCcC------CccccCCCHHHHHHHHHHHhcC
Confidence            53     556667888877321        1   1111111      1234577899999998755543

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=5.5e-05  Score=52.50  Aligned_cols=128  Identities=15%  Similarity=0.102  Sum_probs=75.0

Q ss_pred             chhHHHHHHHHHHHHH----hCC---CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAK---VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAA   74 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~---~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~   74 (178)
                      +++|+.++.++..++.    +.+   -.++|++||.++..+.                     .....|+.+|...+.+.
T Consensus       102 ~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt  160 (254)
T d2gdza1         102 LQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV---------------------AQQPVYCASKHGIVGFT  160 (254)
T ss_dssp             HHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC---------------------TTCHHHHHHHHHHHHHH
T ss_pred             eeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCC---------------------CCccchHHHHHHHHHHH
Confidence            4678887776666654    322   2469999996554321                     23457999999999886


Q ss_pred             HH--H---HHhcCCcEEEecCCceeCCCCCCCC--------hhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhh
Q 030406           75 WE--E---AVARGVDLVVVNPVLVLGPLLQSTV--------NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVY  141 (178)
Q Consensus        75 ~~--~---~~~~~~~~~i~R~~~v~G~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  141 (178)
                      +.  .   ....|+++..+.||.+--+-.....        ......+.+..         ...-+...+|+|++++.++
T Consensus       161 rs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~fL~  231 (254)
T d2gdza1         161 RSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMI---------KYYGILDPPLIANGLITLI  231 (254)
T ss_dssp             HHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHH---------HHHCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHH
Confidence            64  1   2356899999999988422100000        00000010000         0112456899999999999


Q ss_pred             cCCCCCCcE-EE-ecCccCH
Q 030406          142 ETPSASGRY-LC-AESVLHR  159 (178)
Q Consensus       142 ~~~~~~~~~-~~-~~~~~s~  159 (178)
                      ..+...|.. .+ +|..+.+
T Consensus       232 s~~~itG~~i~VdGG~~~~~  251 (254)
T d2gdza1         232 EDDALNGAIMKITTSKGIHF  251 (254)
T ss_dssp             HCTTCSSCEEEEETTTEEEE
T ss_pred             cCCCCCCCEEEECCCCeeec
Confidence            876666644 45 4444443

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=0.00069  Score=46.70  Aligned_cols=125  Identities=16%  Similarity=0.134  Sum_probs=76.4

Q ss_pred             chhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++..+.+++...   +-.++|++||.++..+.                     .....|+.+|...+.+.+.++
T Consensus       108 ~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~lA  166 (250)
T d1ydea1         108 LELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ---------------------AQAVPYVATKGAVTAMTKALA  166 (250)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC---------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccc---------------------cCcchhHHHHhhHHHHHHHHH
Confidence            578999998888877632   22589999996554321                     234679999999999988765


Q ss_pred             Hh---cCCcEEEecCCceeCCCCC---CCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC-CCCCCc-E
Q 030406           79 VA---RGVDLVVVNPVLVLGPLLQ---STVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET-PSASGR-Y  150 (178)
Q Consensus        79 ~~---~~~~~~i~R~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~-~~~~~~-~  150 (178)
                      .+   +|+++-.+.||.|--+-..   .........+.......      ...-+...+|+|++++.++.. .-..|. +
T Consensus       167 ~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~------pl~R~g~p~eva~~v~fL~Sda~~itG~~i  240 (250)
T d1ydea1         167 LDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQ------PLGRMGQPAEVGAAAVFLASEANFCTGIEL  240 (250)
T ss_dssp             HHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTS------TTSSCBCHHHHHHHHHHHHHHCTTCCSCEE
T ss_pred             HHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcC------CCCCCCCHHHHHHHHHHHhCccCCCcCCeE
Confidence            54   4789999999988432100   00000111122222111      112356799999999888742 223453 3


Q ss_pred             EEe
Q 030406          151 LCA  153 (178)
Q Consensus       151 ~~~  153 (178)
                      .+.
T Consensus       241 ~vD  243 (250)
T d1ydea1         241 LVT  243 (250)
T ss_dssp             EES
T ss_pred             EEC
Confidence            453

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.49  E-value=0.00081  Score=45.80  Aligned_cols=124  Identities=8%  Similarity=0.052  Sum_probs=75.6

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++.    +.+..++|++||..+..+                     ......|+.+|...+.+.+.+
T Consensus        94 ~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~---------------------~~~~~~Y~asKaal~~ltk~l  152 (234)
T d1o5ia_          94 IDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISP---------------------IENLYTSNSARMALTGFLKTL  152 (234)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---------------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhhhccccccccccccccccccccccccc---------------------ccccccchhHHHHHHHHHHHH
Confidence            5688888777776664    445568999999533211                     124467999999999887766


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCcE-E
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGRY-L  151 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~-~  151 (178)
                      +.+   +|+++-.+.||.+-.+.......   ....+......|     ..-+...+|+|+++..++...  -..|.. .
T Consensus       153 A~ela~~gIrVN~I~PG~v~T~~~~~~~~---~~~~~~~~~~~p-----l~R~~~pediA~~v~fL~S~~s~~itG~~i~  224 (234)
T d1o5ia_         153 SFEVAPYGITVNCVAPGWTETERVKELLS---EEKKKQVESQIP-----MRRMAKPEEIASVVAFLCSEKASYLTGQTIV  224 (234)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCTTHHHHSC---HHHHHHHHTTST-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhcccCeEEeecccCccchhhhhhhcC---HHHHHHHHhcCC-----CCCCcCHHHHHHHHHHHhChhhcCCcCcEEE
Confidence            554   47888899999885432111000   111122222211     123567999999999888543  235544 4


Q ss_pred             Eec
Q 030406          152 CAE  154 (178)
Q Consensus       152 ~~~  154 (178)
                      +.|
T Consensus       225 vDG  227 (234)
T d1o5ia_         225 VDG  227 (234)
T ss_dssp             EST
T ss_pred             ECc
Confidence            544

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.46  E-value=0.0012  Score=45.75  Aligned_cols=73  Identities=18%  Similarity=0.140  Sum_probs=54.6

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++..    .+-.++|++||.++..+.                     .....|+.+|...+.+.+.+
T Consensus       111 ~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~---------------------~~~~~Y~asKaal~~ltk~l  169 (260)
T d1zema1         111 LTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP---------------------PNMAAYGTSKGAIIALTETA  169 (260)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC---------------------TTBHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccchhhHHhhhhhhcCCCCCeeechhhccCC---------------------cchHHHHHHHHHHHHHHHHH
Confidence            57899998888877653    345689999996554321                     13357999999999998876


Q ss_pred             HHhc---CCcEEEecCCceeC
Q 030406           78 AVAR---GVDLVVVNPVLVLG   95 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G   95 (178)
                      +.+.   |+++..+.||.|-.
T Consensus       170 A~el~~~gIrVN~I~PG~v~T  190 (260)
T d1zema1         170 ALDLAPYNIRVNAISPGYMGP  190 (260)
T ss_dssp             HHHHGGGTEEEEEEEECSBCS
T ss_pred             HHHhhhhCCEEEEeccCcccC
Confidence            5554   68888999998854

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=0.00051  Score=47.21  Aligned_cols=128  Identities=15%  Similarity=0.088  Sum_probs=78.2

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++..    .+-.++|++||..+...                    +......|+.+|...+.+.+.+
T Consensus       102 ~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~--------------------~~~~~~~Y~~sKaal~~l~r~l  161 (245)
T d2ag5a1         102 MNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVK--------------------GVVNRCVYSTTKAAVIGLTKSV  161 (245)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB--------------------CCTTBHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhccchhHHHhhCcccccCCCceeeeeechhhccC--------------------CccchhHHHHHHHHHHHHHHHH
Confidence            57899999888877763    34468999998533110                    1134577999999999998877


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCCh--hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCcE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVN--ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGRY  150 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~  150 (178)
                      +.+.   |+++-.+.||.+-.+.......  .......+......     ...-+...+|+++++..++..+  ...|..
T Consensus       162 A~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~-----pl~R~~~pedva~~v~fL~s~~s~~iTG~~  236 (245)
T d2ag5a1         162 AADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQ-----KTGRFATAEEIAMLCVYLASDESAYVTGNP  236 (245)
T ss_dssp             HHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTC-----TTSSCEEHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHhChhhCCCcCce
Confidence            6654   7888899999886532110000  00011111111111     1223667899999999998643  345544


Q ss_pred             -EEec
Q 030406          151 -LCAE  154 (178)
Q Consensus       151 -~~~~  154 (178)
                       .+.+
T Consensus       237 i~VDG  241 (245)
T d2ag5a1         237 VIIDG  241 (245)
T ss_dssp             EEECT
T ss_pred             EEeCC
Confidence             4533

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.42  E-value=0.0016  Score=45.31  Aligned_cols=129  Identities=16%  Similarity=0.054  Sum_probs=76.5

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++..+++++...  .-.++++++|..+..+                    +......|+.+|...+.+.+.++.
T Consensus       124 ~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~--------------------~~~~~~~Y~asKaal~~ltk~lA~  183 (272)
T d1g0oa_         124 FTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK--------------------AVPKHAVYSGSKGAIETFARCMAI  183 (272)
T ss_dssp             HHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS--------------------SCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhccceeeeeccccccccccccccccccccccccc--------------------cccchhhHHHHHHHHHHHHHHHHH
Confidence            578999999999888752  3357888877433211                    112446699999999999887655


Q ss_pred             h---cCCcEEEecCCceeCCCC--------CCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--C
Q 030406           80 A---RGVDLVVVNPVLVLGPLL--------QSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--A  146 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~  146 (178)
                      +   .|+++-.+.||.+-.+..        ....................    ...-+...+|+|+++..++....  .
T Consensus       184 e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----PlgR~~~peevA~~v~fL~s~~s~~i  259 (272)
T d1g0oa_         184 DMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS----PLRRVGLPIDIARVVCFLASNDGGWV  259 (272)
T ss_dssp             HHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSC----TTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccC----CCCCCcCHHHHHHHHHHHhCchhcCc
Confidence            4   589999999998843210        00000001111111000000    11236778999999999986533  3


Q ss_pred             CCcE-EEec
Q 030406          147 SGRY-LCAE  154 (178)
Q Consensus       147 ~~~~-~~~~  154 (178)
                      .|.. .+.|
T Consensus       260 tG~~i~vDG  268 (272)
T d1g0oa_         260 TGKVIGIDG  268 (272)
T ss_dssp             CSCEEEEST
T ss_pred             cCceEeECC
Confidence            5544 4544

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.41  E-value=0.00025  Score=48.50  Aligned_cols=105  Identities=10%  Similarity=0.004  Sum_probs=73.1

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++.++..++...  +-.++|++||.++..+                     ......|+.||...+.+.+.++.
T Consensus       100 ~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~---------------------~~~~~~Y~asKaal~~lt~~la~  158 (236)
T d1dhra_         100 WKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG---------------------TPGMIGYGMAKGAVHQLCQSLAG  158 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC---------------------CTTBHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHcchHHHHHHHHHHHhcccccceeEEccHHHcCC---------------------ccCCcccHHHHHHHHHHHHHHHH
Confidence            678999998888888752  2358999999644321                     12346799999999999999876


Q ss_pred             h-----cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           80 A-----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        80 ~-----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +     .|+.+..+.||.+--+-        .   .+....      ...-.++..+|+++.+..++...
T Consensus       159 El~~~~~gI~vn~v~PG~v~T~~--------~---~~~~~~------~~~~~~~~pe~va~~~~~l~s~~  211 (236)
T d1dhra_         159 KNSGMPSGAAAIAVLPVTLDTPM--------N---RKSMPE------ADFSSWTPLEFLVETFHDWITGN  211 (236)
T ss_dssp             TTSSCCTTCEEEEEEESCEECHH--------H---HHHSTT------SCGGGSEEHHHHHHHHHHHHTTT
T ss_pred             HhccCCCcEEEEEEEeccCcCCc--------c---hhhCcc------chhhcCCCHHHHHHHHHHHhCCC
Confidence            5     36889999999885321        1   111100      11234677999999999888654

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=0.00052  Score=48.56  Aligned_cols=125  Identities=11%  Similarity=0.010  Sum_probs=74.6

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++..    .+..++|++|+ +...+.                     .....|+.+|...+.+.+..
T Consensus       122 ~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~---------------------~~~~~Y~asKaal~~ltk~l  179 (297)
T d1yxma1         122 LETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGF---------------------PLAVHSGAARAGVYNLTKSL  179 (297)
T ss_dssp             HHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCC---------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             hcccccchhhHHHHHHHhhccccccccccccc-cccccc---------------------cccccchhHHHHHHHHHHHH
Confidence            67899999988887753    34556887766 332110                     13467999999999998887


Q ss_pred             HHhc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCC-cEE
Q 030406           78 AVAR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASG-RYL  151 (178)
Q Consensus        78 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~  151 (178)
                      +.+.   |+++-.+.||.+..+...........   ..........+  ..-+...+|+|++++.++...  -..| ...
T Consensus       180 A~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~---~~~~~~~~~~p--lgR~g~pedvA~~v~fL~Sd~s~~iTG~~i~  254 (297)
T d1yxma1         180 ALEWACSGIRINCVAPGVIYSQTAVENYGSWGQ---SFFEGSFQKIP--AKRIGVPEEVSSVVCFLLSPAASFITGQSVD  254 (297)
T ss_dssp             HHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGG---GGGTTGGGGST--TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHhcccCceEEEeeeCcCcCcchhhhccccCH---HHHHHHHhcCC--CCCCcCHHHHHHHHHHHhCchhcCcCCcEEE
Confidence            6554   78888999998865432111110000   00001000001  122556899999999988543  3355 334


Q ss_pred             Ee
Q 030406          152 CA  153 (178)
Q Consensus       152 ~~  153 (178)
                      +.
T Consensus       255 VD  256 (297)
T d1yxma1         255 VD  256 (297)
T ss_dssp             ES
T ss_pred             eC
Confidence            53

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.40  E-value=0.0015  Score=45.09  Aligned_cols=129  Identities=19%  Similarity=0.117  Sum_probs=76.9

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.+...+++++...  +-.++++++|.++...   .                 ......|+.+|...+.+.+.++.
T Consensus       112 ~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~---~-----------------~~~~~~Y~asK~al~~l~r~lA~  171 (259)
T d1ja9a_         112 FNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT---G-----------------IPNHALYAGSKAAVEGFCRAFAV  171 (259)
T ss_dssp             HHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC---S-----------------CCSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HhhccceeeeehhhhhhhhhcCCccccccccccccc---C-----------------CCCchhHHHHHHHHHHHHHHHHH
Confidence            578999988888888752  2246666666434321   0                 01335699999999988887655


Q ss_pred             h---cCCcEEEecCCceeCCC---------CCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCCC--
Q 030406           80 A---RGVDLVVVNPVLVLGPL---------LQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETPS--  145 (178)
Q Consensus        80 ~---~~~~~~i~R~~~v~G~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--  145 (178)
                      +   .|+++-.+.||.+--+-         ...........+........     ...-+...+|+++++..++....  
T Consensus       172 e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----pl~R~g~p~eVa~~v~fL~S~~a~~  246 (259)
T d1ja9a_         172 DCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN-----PLKRIGYPADIGRAVSALCQEESEW  246 (259)
T ss_dssp             HHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS-----TTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCC-----CCCCCcCHHHHHHHHHHHhCchhcC
Confidence            4   47999999999884321         00000111122222222221     12236779999999999987543  


Q ss_pred             CCCcE-EEecC
Q 030406          146 ASGRY-LCAES  155 (178)
Q Consensus       146 ~~~~~-~~~~~  155 (178)
                      ..|.. .+.+.
T Consensus       247 itG~~i~vDGG  257 (259)
T d1ja9a_         247 INGQVIKLTGG  257 (259)
T ss_dssp             CCSCEEEESTT
T ss_pred             CcCceEEeCCC
Confidence            35544 45544

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=97.35  E-value=0.0016  Score=44.67  Aligned_cols=124  Identities=15%  Similarity=0.046  Sum_probs=76.1

Q ss_pred             hhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHHh
Q 030406            3 EPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAVA   80 (178)
Q Consensus         3 ~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~   80 (178)
                      ++|+.+...++.++...  +-+.+|++||.++..+.                     .....|+.+|...+.+.+..+.+
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~---------------------~~~~~Y~~sKaal~~ltr~lA~e  175 (258)
T d1qsga_         117 DISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI---------------------PNYNVMGLAKASLEANVRYMANA  175 (258)
T ss_dssp             HHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC---------------------TTTTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCC---------------------CCcHHHHHHHHHHHHHHHHHHHH
Confidence            56777788888877653  23568888885443211                     13467999999999998876655


Q ss_pred             c---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCcE-EEec
Q 030406           81 R---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGRY-LCAE  154 (178)
Q Consensus        81 ~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~-~~~~  154 (178)
                      .   |+++-.++||.|..+..... . .............| .    .-+..++|+++++..++...  -..|.. .+.+
T Consensus       176 l~~~gIrVN~I~PG~i~T~~~~~~-~-~~~~~~~~~~~~~p-l----~R~~~peeia~~v~fL~s~~s~~itG~~i~vDG  248 (258)
T d1qsga_         176 MGPEGVRVNAISAGPIRTLAASGI-K-DFRKMLAHCEAVTP-I----RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDG  248 (258)
T ss_dssp             HTTTTEEEEEEEECCCCCTTGGGS-T-THHHHHHHHHHHST-T----SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             hCccCceeeccccccccccccccc-c-hhhhHHHHHHhCCC-C----CCCcCHHHHHHHHHHHhCchhcCccCceEEECc
Confidence            4   68888999999965432221 1 11111111111111 1    12566999999999988543  345644 4543

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=0.00017  Score=49.70  Aligned_cols=103  Identities=16%  Similarity=0.052  Sum_probs=69.6

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.|+.++.+++.    +.+-.++|++||..+..+                     ......|+.||.+.+.+.+.+
T Consensus       112 ~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~---------------------~~~~~~Y~asKaal~~~~~~L  170 (244)
T d1yb1a_         112 FEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS---------------------VPFLLAYCSSKFAAVGFHKTL  170 (244)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC---------------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCC---------------------CCCcHHHHHHHHHHHHHHHHH
Confidence            6789999888777654    456678999999644321                     123467999999999998887


Q ss_pred             HHh------cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           78 AVA------RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        78 ~~~------~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      +.+      .|+.+..+.||.|--+-...               ..    .....++..+|+++.+...+..+
T Consensus       171 a~El~~~~~~gI~V~~i~PG~v~T~~~~~---------------~~----~~~~~~~~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         171 TDELAALQITGVKTTCLCPNFVNTGFIKN---------------PS----TSLGPTLEPEEVVNRLMHGILTE  224 (244)
T ss_dssp             HHHHHHTTCTTEEEEEEEETHHHHCSTTC---------------TH----HHHCCCCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHhhcCCCEEEEEEEcCCCCChhhhC---------------cC----ccccCCCCHHHHHHHHHHHHhcC
Confidence            654      37899999999773221110               00    01113346899999998877664

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.32  E-value=0.00088  Score=45.88  Aligned_cols=125  Identities=18%  Similarity=0.151  Sum_probs=75.5

Q ss_pred             chhHHHHHHHHHHHHHh-----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE-----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~-----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++..+.+++..     .+-.++|++||..+..+                     ......|+.+|...+.+.+.
T Consensus       102 ~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~---------------------~~~~~~Y~asKaal~~lt~~  160 (242)
T d1cyda_         102 FSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT---------------------FPNLITYSSTKGAMTMLTKA  160 (242)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC---------------------CTTBHHHHHHHHHHHHHHHH
T ss_pred             HHHHhccchHHHHHhchhhhhhcccCcccccchhhcccc---------------------CCccccccchHHHHHHHHHH
Confidence            67899999888876542     23458999999533221                     12346799999999999887


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCc-E
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGR-Y  150 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~  150 (178)
                      ++.+   +|+++-.+.||.+-.+..... ... ....+......     ...-+...+|+++++..++...  -..|. +
T Consensus       161 lA~e~~~~gIrvN~I~PG~i~T~~~~~~-~~~-~~~~~~~~~~~-----pl~R~~~peeva~~v~fL~S~~s~~itG~~i  233 (242)
T d1cyda_         161 MAMELGPHKIRVNSVNPTVVLTDMGKKV-SAD-PEFARKLKERH-----PLRKFAEVEDVVNSILFLLSDRSASTSGGGI  233 (242)
T ss_dssp             HHHHHGGGTEEEEEEEECCBTTHHHHHH-TCC-HHHHHHHHHHS-----TTSSCBCHHHHHHHHHHHHSGGGTTCCSSEE
T ss_pred             HHHHhCccCeecccCCCCCccCHHHHhh-cCC-HHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHhCchhcCcCCceE
Confidence            7654   478888999998853311000 000 01111111111     1223567999999999888543  23553 4


Q ss_pred             EEec
Q 030406          151 LCAE  154 (178)
Q Consensus       151 ~~~~  154 (178)
                      .+.|
T Consensus       234 ~vDG  237 (242)
T d1cyda_         234 LVDA  237 (242)
T ss_dssp             EEST
T ss_pred             EeCc
Confidence            4544

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.27  E-value=0.0008  Score=46.49  Aligned_cols=113  Identities=18%  Similarity=0.063  Sum_probs=71.7

Q ss_pred             chhHHHHHHHHHHHHHhC----C--CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA----K--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW   75 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~----~--~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~   75 (178)
                      +++|+.++..+.+++...    +  ..++|++||.++..+                     ......|+.+|...+.+.+
T Consensus       123 ~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~---------------------~~~~~~Y~asKaal~~lt~  181 (259)
T d1oaaa_         123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP---------------------YKGWGLYCAGKAARDMLYQ  181 (259)
T ss_dssp             HHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC---------------------CTTCHHHHHHHHHHHHHHH
T ss_pred             HHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC---------------------CccchHHHHHHHHHHHHHH
Confidence            578999999999988753    2  248999999654332                     1234679999999999988


Q ss_pred             HHHHh-cCCcEEEecCCceeCCCCCC-----CChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           76 EEAVA-RGVDLVVVNPVLVLGPLLQS-----TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        76 ~~~~~-~~~~~~i~R~~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      .++.+ .|+++..+.||.+-.+....     ........+....         ..--+..++|+|++++.++...
T Consensus       182 ~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~---------~~~r~~~p~evA~~i~~ll~~~  247 (259)
T d1oaaa_         182 VLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLK---------SDGALVDCGTSAQKLLGLLQKD  247 (259)
T ss_dssp             HHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHH---------HTTCSBCHHHHHHHHHHHHHHC
T ss_pred             HHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhhhc
Confidence            77654 37888889999885431000     0000001111110         0112467899999998888643

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=0.0016  Score=44.98  Aligned_cols=115  Identities=14%  Similarity=0.053  Sum_probs=68.9

Q ss_pred             chhHHHHHHHHHHHHH----hCC--CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAW   75 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~--~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~   75 (178)
                      +++|+.++..+.+++.    +.+  -.++|++||+++....                   +......|+.+|...+.+.+
T Consensus       117 ~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~-------------------p~~~~~~Y~~sKaal~~ltr  177 (257)
T d1xg5a_         117 FNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL-------------------PLSVTHFYSATKYAVTALTE  177 (257)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC-------------------SCGGGHHHHHHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC-------------------CCcccHHHHHHHHHHHhCHH
Confidence            5788888877766653    333  3689999995432110                   11234569999999999988


Q ss_pred             HHHH-----hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           76 EEAV-----ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        76 ~~~~-----~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      .++.     ..++.+..+-||.+-.+................         .....++..+|+|++++.++..+
T Consensus       178 ~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~---------~~~~r~~~pedvA~~v~fL~s~~  242 (257)
T d1xg5a_         178 GLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAAT---------YEQMKCLKPEDVAEAVIYVLSTP  242 (257)
T ss_dssp             HHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHH---------HC---CBCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCCh
Confidence            7764     357888889898763221000000001111110         01233577999999999988765

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.21  E-value=0.0026  Score=43.44  Aligned_cols=122  Identities=20%  Similarity=0.127  Sum_probs=75.5

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++..+.+++...  +-+.++++|| .+...                    . .....|+.+|...|.+.+..+.
T Consensus       107 ~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss-~a~~~--------------------~-~~~~~Y~~sK~al~~lt~~lA~  164 (241)
T d2a4ka1         107 LRVNLTGSFLVARKAGEVLEEGGSLVLTGS-VAGLG--------------------A-FGLAHYAAGKLGVVGLARTLAL  164 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCTTCEEEEECC-CTTCC--------------------H-HHHHHHHHCSSHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccceeeccc-ccccc--------------------c-cCccccchhhHHHHHHHHHHHH
Confidence            678999999999887653  3455665555 33210                    1 2345699999999999988766


Q ss_pred             hc---CCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCcE-EEe
Q 030406           80 AR---GVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGRY-LCA  153 (178)
Q Consensus        80 ~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~-~~~  153 (178)
                      +.   |+++-.+.||.+-.+.....   .-.......+.. |     ..-+...+|+|++++.++...  -..|.. .+.
T Consensus       165 el~~~gIrvN~I~PG~v~T~~~~~~---~~~~~~~~~~~~-p-----~~r~~~p~dva~~v~fL~S~~s~~itG~~i~vD  235 (241)
T d2a4ka1         165 ELARKGVRVNVLLPGLIQTPMTAGL---PPWAWEQEVGAS-P-----LGRAGRPEEVAQAALFLLSEESAYITGQALYVD  235 (241)
T ss_dssp             HHTTTTCEEEEEEECSBCCGGGTTS---CHHHHHHHHHTS-T-----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHhHhCCEEeeeccCcCCCHHHHhh---hHhHHHHHHhCC-C-----CCCCcCHHHHHHHHHHHhcchhCCCcCceEEeC
Confidence            65   58899999998844322111   111122222221 1     122557999999999998643  245544 454


Q ss_pred             c
Q 030406          154 E  154 (178)
Q Consensus       154 ~  154 (178)
                      |
T Consensus       236 G  236 (241)
T d2a4ka1         236 G  236 (241)
T ss_dssp             T
T ss_pred             C
Confidence            3

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.17  E-value=0.0042  Score=43.18  Aligned_cols=130  Identities=12%  Similarity=0.140  Sum_probs=75.1

Q ss_pred             chhHHHHHHHHHHHHHh----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++..    .+-.+++++||.++..+                     ......|+.+|...+.+.+..
T Consensus       114 ~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~---------------------~~~~~~Y~asKaal~~ltk~l  172 (274)
T d1xhla_         114 FKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA---------------------HSGYPYYACAKAALDQYTRCT  172 (274)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC---------------------CTTSHHHHHHHHHHHHHHHHH
T ss_pred             Hhhcccccccccccccccccccccccccchhhhhcccc---------------------CCCCceehhhhhHHHHHHHHH
Confidence            57899998888777753    44557777777432211                     013457999999999998765


Q ss_pred             HHh---cCCcEEEecCCceeCCCCCC--CChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC---CCCCC-
Q 030406           78 AVA---RGVDLVVVNPVLVLGPLLQS--TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET---PSASG-  148 (178)
Q Consensus        78 ~~~---~~~~~~i~R~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~---~~~~~-  148 (178)
                      +.+   +|+++-.+.||.+--+-...  ........+...........+  ..-+...+|+|++++.++..   .-..| 
T Consensus       173 A~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iP--lgR~g~pediA~~v~fL~S~d~s~~itG~  250 (274)
T d1xhla_         173 AIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIP--VGHCGKPEEIANIIVFLADRNLSSYIIGQ  250 (274)
T ss_dssp             HHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT--TSSCBCHHHHHHHHHHHHCHHHHTTCCSC
T ss_pred             HHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCC--CCCCcCHHHHHHHHHHHcCCccccCccCc
Confidence            544   47999999999985432110  000111112222221111111  11245699999999988852   23456 


Q ss_pred             cEEEec
Q 030406          149 RYLCAE  154 (178)
Q Consensus       149 ~~~~~~  154 (178)
                      .+.+.|
T Consensus       251 ~i~vDG  256 (274)
T d1xhla_         251 SIVADG  256 (274)
T ss_dssp             EEEEST
T ss_pred             EEEeCc
Confidence            445643

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.01  E-value=0.0021  Score=44.51  Aligned_cols=128  Identities=13%  Similarity=0.133  Sum_probs=71.5

Q ss_pred             chhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++..+.+++...   +-.++|+++|..+...                    +......|+.+|...+.+.+.++
T Consensus       117 ~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~--------------------~~~~~~~Y~asKaal~~lt~~lA  176 (264)
T d1spxa_         117 LNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLH--------------------ATPDFPYYSIAKAAIDQYTRNTA  176 (264)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSS--------------------CCTTSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhHHHHHHHHhhhCCccccccCcceeeeeeccccc--------------------cCCCchhhhhhhhhHHHHHHHHH
Confidence            578999988888777642   2245666666333210                    01133569999999999987765


Q ss_pred             Hh---cCCcEEEecCCceeCCCCCCCC-----hhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC---CCC
Q 030406           79 VA---RGVDLVVVNPVLVLGPLLQSTV-----NASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP---SAS  147 (178)
Q Consensus        79 ~~---~~~~~~i~R~~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~  147 (178)
                      .+   +|+++-.+.||.+--+......     ............... .    ..-+...+|+|++++.++..+   -..
T Consensus       177 ~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-P----l~R~g~pedvA~~v~fL~S~~~s~~it  251 (264)
T d1spxa_         177 IDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECV-P----AGVMGQPQDIAEVIAFLADRKTSSYII  251 (264)
T ss_dssp             HHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHC-T----TSSCBCHHHHHHHHHHHHCHHHHTTCC
T ss_pred             HHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcC-C----CCCCcCHHHHHHHHHHHhCCcccCCcc
Confidence            54   4799999999988543211100     000000111111110 1    112556899999999888532   245


Q ss_pred             Cc-EEEec
Q 030406          148 GR-YLCAE  154 (178)
Q Consensus       148 ~~-~~~~~  154 (178)
                      |. +.+.|
T Consensus       252 G~~i~vDG  259 (264)
T d1spxa_         252 GHQLVVDG  259 (264)
T ss_dssp             SCEEEEST
T ss_pred             CceEEeCC
Confidence            54 44543

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.98  E-value=0.0052  Score=42.28  Aligned_cols=131  Identities=17%  Similarity=0.157  Sum_probs=74.2

Q ss_pred             chhHHHHHHHHHHHHHh-----CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE-----AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~-----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +++|+.++..+.+++.+     .+...++..||. ........      .-.       .......|+.+|...+.+.+.
T Consensus       115 ~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~-~~~~~~~~------~~~-------~~~~~~~Y~asKaal~~lt~~  180 (260)
T d1h5qa_         115 YDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSM-SSQIINQS------SLN-------GSLTQVFYNSSKAACSNLVKG  180 (260)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG-GGTSCCEE------ETT-------EECSCHHHHHHHHHHHHHHHH
T ss_pred             ccccccchhhhhhhhcccccccccceEEEEeecc-cccccccc------ccc-------cCccccchhhhhhhHHHHHHH
Confidence            57899998887766542     234456666663 32211100      000       112446799999999999887


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCc-E
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGR-Y  150 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~  150 (178)
                      ++.+   +|+++-.+.||.+-.+.....    ............|     ..-+...+|+|++++.++...  -..|. +
T Consensus       181 lA~el~~~gIrvN~I~PG~i~T~~~~~~----~~~~~~~~~~~~p-----l~R~g~pedvA~~v~fL~S~~s~~itG~~i  251 (260)
T d1h5qa_         181 LAAEWASAGIRVNALSPGYVNTDQTAHM----DKKIRDHQASNIP-----LNRFAQPEEMTGQAILLLSDHATYMTGGEY  251 (260)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCCGGGGGS----CHHHHHHHHHTCT-----TSSCBCGGGGHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHhchhCeEEeecCCCcccCcchhcc----CHHHHHHHHhcCC-----CCCCcCHHHHHHHHHHHhcchhCCCcCceE
Confidence            6544   478899999998854332111    1111122211111     112556899999999888543  23554 4


Q ss_pred             EEecC
Q 030406          151 LCAES  155 (178)
Q Consensus       151 ~~~~~  155 (178)
                      .+.|.
T Consensus       252 ~VDGG  256 (260)
T d1h5qa_         252 FIDGG  256 (260)
T ss_dssp             EECTT
T ss_pred             EECCC
Confidence            45443

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=96.95  E-value=0.0086  Score=41.40  Aligned_cols=122  Identities=12%  Similarity=-0.007  Sum_probs=72.1

Q ss_pred             chhHHHHHHHHHHHHHh----------CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----------AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAE   71 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----------~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E   71 (178)
                      +.+|+.++..+.+++.+          .+...+|+++|.....                     +......|+.+|...+
T Consensus       140 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~s~~~~~---------------------~~~~~~~Y~asKaal~  198 (284)
T d1e7wa_         140 FGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ---------------------PLLGYTIYTMAKGALE  198 (284)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTS---------------------CCTTCHHHHHHHHHHH
T ss_pred             HhhheeeeeeeeccccchhhhhHHHhcCCCCcccccccccccC---------------------Cccceeeeccccccch
Confidence            46788888877776532          2234677777632211                     1123467999999999


Q ss_pred             HHHHHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CC
Q 030406           72 KAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SA  146 (178)
Q Consensus        72 ~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~  146 (178)
                      .+.+.++.+   +|+++-.+.||.+--...      .............+..+    -+...+|++++++.++...  -.
T Consensus       199 ~lt~~lA~el~~~gIrvN~I~PG~t~~~~~------~~~~~~~~~~~~~pl~~----R~~~peeiA~~v~fL~S~~s~~i  268 (284)
T d1e7wa_         199 GLTRSAALELAPLQIRVNGVGPGLSVLVDD------MPPAVWEGHRSKVPLYQ----RDSSAAEVSDVVIFLCSSKAKYI  268 (284)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEESSBCCGGG------SCHHHHHHHHTTCTTTT----SCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             hhhHHHHHHhCCcccccccccccccccccc------CCHHHHHHHHhcCCCCC----CCCCHHHHHHHHHHHhCchhcCc
Confidence            998876654   478888899986421111      11112223333333222    2456999999999888543  23


Q ss_pred             CCcE-EEec
Q 030406          147 SGRY-LCAE  154 (178)
Q Consensus       147 ~~~~-~~~~  154 (178)
                      .|.. .+.|
T Consensus       269 tG~~i~VDG  277 (284)
T d1e7wa_         269 TGTCVKVDG  277 (284)
T ss_dssp             CSCEEEEST
T ss_pred             cCCeEEECc
Confidence            5544 4533

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=96.94  E-value=0.0015  Score=45.03  Aligned_cols=128  Identities=11%  Similarity=0.064  Sum_probs=75.1

Q ss_pred             chhHHHHHHHHHHHHHh---CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE---AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++..+++++..   .+-.++|++||.++..+.                     .....|+.+|...+.+.+..+
T Consensus       108 ~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~---------------------~~~~~Y~asKaal~~lt~~lA  166 (253)
T d1hxha_         108 LKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPI---------------------EQYAGYSASKAAVSALTRAAA  166 (253)
T ss_dssp             HHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCC---------------------TTBHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCc---------------------cccccccchhHHHHHHHHHHH
Confidence            57899998888777653   123689999996553321                     234679999999999987665


Q ss_pred             Hh-----cCCcEEEecCCceeCCCCCCCCh-hhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCc-
Q 030406           79 VA-----RGVDLVVVNPVLVLGPLLQSTVN-ASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGR-  149 (178)
Q Consensus        79 ~~-----~~~~~~i~R~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-  149 (178)
                      .+     +++++-.+.||.+-.+-...... ...   ........+.  ...--+...+|+|++++.++...  -..|. 
T Consensus       167 ~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~---~~~~~~~~~~--~~~gr~~~pedvA~~v~fL~S~~s~~itG~~  241 (253)
T d1hxha_         167 LSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVS---KEMVLHDPKL--NRAGRAYMPERIAQLVLFLASDESSVMSGSE  241 (253)
T ss_dssp             HHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCC---HHHHBCBTTT--BTTCCEECHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhh---HHHHHhCccc--cccCCCCCHHHHHHHHHHHhChhhCCCcCcE
Confidence            44     34788889999885321000000 000   0111111000  01123677899999999888543  23554 


Q ss_pred             EEEecC
Q 030406          150 YLCAES  155 (178)
Q Consensus       150 ~~~~~~  155 (178)
                      ..+.+.
T Consensus       242 i~VDGG  247 (253)
T d1hxha_         242 LHADNS  247 (253)
T ss_dssp             EEESSS
T ss_pred             EEECcc
Confidence            455443

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.89  E-value=0.0027  Score=43.39  Aligned_cols=75  Identities=15%  Similarity=0.049  Sum_probs=52.0

Q ss_pred             chhHHHHHHHHHHHHHh---------------CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE---------------AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYG   66 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~---------------~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s   66 (178)
                      +++|+.|+..+.+++..               .+..++|.+||..+.....                  +......|+.|
T Consensus       112 ~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~~------------------~~~~~~~Y~aS  173 (248)
T d1snya_         112 LQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGN------------------TDGGMYAYRTS  173 (248)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTC------------------CSCCCHHHHHH
T ss_pred             HHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCCC------------------CCCChHHHHHH
Confidence            57899998888776542               1346899999954332110                  11234579999


Q ss_pred             HHHHHHHHHHHHH---hcCCcEEEecCCcee
Q 030406           67 KAVAEKAAWEEAV---ARGVDLVVVNPVLVL   94 (178)
Q Consensus        67 K~~~E~~~~~~~~---~~~~~~~i~R~~~v~   94 (178)
                      |.+...+.+.++.   ..|+.+..+.||.|-
T Consensus       174 Kaal~~lt~~la~e~~~~gI~vn~v~PG~v~  204 (248)
T d1snya_         174 KSALNAATKSLSVDLYPQRIMCVSLHPGWVK  204 (248)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEECCCSBC
T ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEcCCCccc
Confidence            9999998776543   347999999999884

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.89  E-value=0.0079  Score=41.64  Aligned_cols=130  Identities=12%  Similarity=0.116  Sum_probs=72.3

Q ss_pred             chhHHHHHHHHHHHHHhC---CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA---KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++..+.+++...   +-..+|+++|..+...                    +......|+.+|...+.+.+.++
T Consensus       117 ~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~--------------------~~~~~~~Y~asKaal~~ltk~lA  176 (272)
T d1xkqa_         117 LKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQ--------------------AQPDFLYYAIAKAALDQYTRSTA  176 (272)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSS--------------------CCCSSHHHHHHHHHHHHHHHHHH
T ss_pred             HHhhhhHHHHHHHhhcccccccCCccccccchhcccc--------------------CCCCcchhhhHHHHHHHHHHHHH
Confidence            568999988888876542   2235555555222110                    01234679999999999988765


Q ss_pred             Hh---cCCcEEEecCCceeCCCCCC--CChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC---CCCCCcE
Q 030406           79 VA---RGVDLVVVNPVLVLGPLLQS--TVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET---PSASGRY  150 (178)
Q Consensus        79 ~~---~~~~~~i~R~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~---~~~~~~~  150 (178)
                      .+   +|+++-.+.||.|-.+-...  ....................+  ..-+...+|+|++++.++..   .-..|..
T Consensus       177 ~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~P--lgR~g~pediA~~v~fL~S~~as~~iTG~~  254 (272)
T d1xkqa_         177 IDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIP--IGAAGKPEHIANIILFLADRNLSFYILGQS  254 (272)
T ss_dssp             HHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT--TSSCBCHHHHHHHHHHHHCHHHHTTCCSCE
T ss_pred             HHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCC--CCCCcCHHHHHHHHHHHhCcchhCCccCeE
Confidence            44   47999999999884331100  000111111111111111111  11256799999999988853   2245544


Q ss_pred             -EEe
Q 030406          151 -LCA  153 (178)
Q Consensus       151 -~~~  153 (178)
                       .+.
T Consensus       255 i~vD  258 (272)
T d1xkqa_         255 IVAD  258 (272)
T ss_dssp             EEES
T ss_pred             EEeC
Confidence             453

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.0016  Score=45.23  Aligned_cols=105  Identities=15%  Similarity=0.016  Sum_probs=67.1

Q ss_pred             chhHHHHHHHHHHHHHh---CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE---AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEA   78 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~   78 (178)
                      +++|+.++..+..++..   .+-.++|++||.++..+.                     .....|+.||...+.+.+.++
T Consensus       120 ~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~---------------------p~~~~Y~asKaal~~~~~~La  178 (269)
T d1xu9a_         120 MEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY---------------------PMVAAYSASKFALDGFFSSIR  178 (269)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC---------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             eeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCC---------------------CCchHHHHHHHHHHHHHHHHH
Confidence            57788888777776653   123589999996443321                     234689999999999988776


Q ss_pred             Hh-----cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC
Q 030406           79 VA-----RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP  144 (178)
Q Consensus        79 ~~-----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  144 (178)
                      .+     .++.+..+.||.|--+        .   ..+...+.      ........+++++.++......
T Consensus       179 ~El~~~~~~I~V~~v~PG~v~T~--------~---~~~~~~~~------~~~~~~~~e~~a~~i~~~~~~~  232 (269)
T d1xu9a_         179 KEYSVSRVNVSITLCVLGLIDTE--------T---AMKAVSGI------VHMQAAPKEECALEIIKGGALR  232 (269)
T ss_dssp             HHHHHHTCCCEEEEEEECCBCCH--------H---HHHHSCGG------GGGGCBCHHHHHHHHHHHHHTT
T ss_pred             HHhhhcCCCEEEEEEecCcCCCc--------H---HHHhccCC------ccccCCCHHHHHHHHHHHhhcC
Confidence            54     3577888999988311        1   11211111      1223456788998888776554

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.82  E-value=0.0071  Score=43.08  Aligned_cols=72  Identities=7%  Similarity=-0.031  Sum_probs=51.8

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEEAV   79 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~   79 (178)
                      +++|+.++..+++++...  +-.++|.+||.++..+.    |                ...+.|+.+|...+.+.+.++.
T Consensus       143 ~~vn~~~~~~~~k~~~~~m~~~GsIv~iss~~~~~~~----p----------------~y~~~y~asKaal~~ltr~lA~  202 (329)
T d1uh5a_         143 LSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVV----P----------------GYGGGMSSAKAALESDTRVLAY  202 (329)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC----T----------------TCTTTHHHHHHHHHHHHHHHHH
T ss_pred             cccchhHHHHHHHHHHhhcccccccccceeehhcccc----c----------------ccchhhhhhhccccccchhhHH
Confidence            567888888888888764  23578888884332110    1                2345699999999999887654


Q ss_pred             ----hcCCcEEEecCCce
Q 030406           80 ----ARGVDLVVVNPVLV   93 (178)
Q Consensus        80 ----~~~~~~~i~R~~~v   93 (178)
                          ++|+++-.+.||.+
T Consensus       203 Ela~~~gIRVNaI~PG~i  220 (329)
T d1uh5a_         203 HLGRNYNIRINTISAGPL  220 (329)
T ss_dssp             HHHHHHCCEEEEEEECCC
T ss_pred             HHhcccCcEEEEEecCcc
Confidence                35899999999976

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.43  E-value=0.012  Score=40.14  Aligned_cols=118  Identities=19%  Similarity=0.087  Sum_probs=67.9

Q ss_pred             chhHHHHHHHHHHHHHh----C-----------CCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHH
Q 030406            2 VEPAVIGTKNVIVAAAE----A-----------KVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYG   66 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~----~-----------~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s   66 (178)
                      +++|+.|+..+.+++..    .           ...+++.+|+..........       ..       ...+...|+.|
T Consensus       110 ~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~-------~~-------~~~~~~aY~aS  175 (250)
T d1yo6a1         110 LDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS-------GS-------AQFPVLAYRMS  175 (250)
T ss_dssp             HHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCS-------TT-------SSSCBHHHHHH
T ss_pred             HHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCcc-------cc-------cchhHHHHHHH
Confidence            67899999888777641    1           12467777774222211111       10       12345679999


Q ss_pred             HHHHHHHHHHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC
Q 030406           67 KAVAEKAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET  143 (178)
Q Consensus        67 K~~~E~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  143 (178)
                      |.+...+.+.++.+   .|+.+..+.||.|--+- .               +        ....+..++.++.++..+..
T Consensus       176 Kaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m-~---------------~--------~~~~~~~e~~a~~~~~~~~~  231 (250)
T d1yo6a1         176 KAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL-G---------------G--------KNAALTVEQSTAELISSFNK  231 (250)
T ss_dssp             HHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------------HHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCC-C---------------C--------CCCCCCHHHHHHHHHHHHhc
Confidence            99999998876654   47899999999872110 0               0        01124567888888888865


Q ss_pred             CC--CCCcEEE-ecCcc
Q 030406          144 PS--ASGRYLC-AESVL  157 (178)
Q Consensus       144 ~~--~~~~~~~-~~~~~  157 (178)
                      ..  ..|.|+. .+.++
T Consensus       232 ~~~~~sG~f~~~~g~p~  248 (250)
T d1yo6a1         232 LDNSHNGRFFMRNLKPY  248 (250)
T ss_dssp             CCGGGTTCEEETTEEEC
T ss_pred             CCCCCCeEEECCCCeeC
Confidence            43  3455643 34444

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.36  E-value=0.051  Score=37.66  Aligned_cols=125  Identities=15%  Similarity=0.017  Sum_probs=69.1

Q ss_pred             chhHHHHHHHHHHHHH----h-CCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----E-AKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWE   76 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~-~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~   76 (178)
                      +.+|..+...+...+.    . .+...++.+||..+..+                     ......|+.+|...+.+.+.
T Consensus       131 ~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~---------------------~~~~~~YsasKaal~~ltk~  189 (294)
T d1w6ua_         131 TDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG---------------------SGFVVPSASAKAGVEAMSKS  189 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC---------------------CTTCHHHHHHHHHHHHHHHH
T ss_pred             eeeecccchhhhhhhhcccccccccccccccccchhhhc---------------------ccccchHHHHHHHHHHHHHH
Confidence            3456666555554432    2 23456777776433221                     12345699999999999887


Q ss_pred             HHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcCC--CCCCcE-
Q 030406           77 EAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYETP--SASGRY-  150 (178)
Q Consensus        77 ~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~-  150 (178)
                      ++.+   +|+++-.+.||.+-.+.........-. .........|     ..-+...+|+|+++..++...  -..|.. 
T Consensus       190 lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~-~~~~~~~~~p-----l~R~~~pediA~~v~fL~sd~s~~itG~~i  263 (294)
T d1w6ua_         190 LAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGT-FEKEMIGRIP-----CGRLGTVEELANLAAFLCSDYASWINGAVI  263 (294)
T ss_dssp             HHHHHGGGTEEEEEEEECCBCC------CCTTSH-HHHHHHTTCT-----TSSCBCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             HHHHHhHhCeEEEEEccCccccchhhhccCCcHH-HHHHHhhcCC-----CCCCCCHHHHHHHHHHHhCchhcCCCCcEE
Confidence            7654   478899999999865432111111101 1111112111     122556899999999988543  245544 


Q ss_pred             EEe
Q 030406          151 LCA  153 (178)
Q Consensus       151 ~~~  153 (178)
                      .+.
T Consensus       264 ~vD  266 (294)
T d1w6ua_         264 KFD  266 (294)
T ss_dssp             EES
T ss_pred             EEC
Confidence            453

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.34  E-value=0.0059  Score=42.41  Aligned_cols=126  Identities=17%  Similarity=0.093  Sum_probs=72.7

Q ss_pred             chhHHHHHHHHHHHHH----hCCCCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH
Q 030406            2 VEPAVIGTKNVIVAAA----EAKVRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~   77 (178)
                      +++|+.++..+.+++.    +.+ .++|++||..+..+.                     .....|+.+|...+.+.+.+
T Consensus       112 ~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~---------------------~~~~~Y~asKaal~~ltr~l  169 (276)
T d1bdba_         112 FHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPN---------------------GGGPLYTAAKHAIVGLVREL  169 (276)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTT---------------------SSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCC---------------------CCCchHHHHHHHHHHHHHHH
Confidence            5789999888877764    334 578888885443321                     13356999999999998877


Q ss_pred             HHhc--CCcEEEecCCceeCCCCCCCChh------hHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC---CCC
Q 030406           78 AVAR--GVDLVVVNPVLVLGPLLQSTVNA------SIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET---PSA  146 (178)
Q Consensus        78 ~~~~--~~~~~i~R~~~v~G~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~---~~~  146 (178)
                      +.+.  ++++-.+.||.|--+-.......      ....+........| .    .-+...+|+|++++.++..   .-.
T Consensus       170 A~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-l----gR~g~peeva~~v~fL~S~~~a~~i  244 (276)
T d1bdba_         170 AFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLP-I----GRMPEVEEYTGAYVFFATRGDAAPA  244 (276)
T ss_dssp             HHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCT-T----SSCCCGGGGSHHHHHHHCHHHHTTC
T ss_pred             HHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCC-C----CCCcCHHHHHHHHHHHcCCcccCCe
Confidence            6654  36777889998843321110000      00011122222211 1    1245689999998877642   334


Q ss_pred             CC-cEEEec
Q 030406          147 SG-RYLCAE  154 (178)
Q Consensus       147 ~~-~~~~~~  154 (178)
                      .| .+.+.|
T Consensus       245 tG~~i~VDG  253 (276)
T d1bdba_         245 TGALLNYDG  253 (276)
T ss_dssp             SSCEEEESS
T ss_pred             eCcEEEECc
Confidence            55 445533

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.33  E-value=0.0033  Score=43.63  Aligned_cols=93  Identities=20%  Similarity=0.070  Sum_probs=56.0

Q ss_pred             chhHHHHHHHHHHHHHhC--CCCEEEEeccccccccCCCCCC-------CCccCCCC-------------CCchhhhccc
Q 030406            2 VEPAVIGTKNVIVAAAEA--KVRRVVFTSSIGAVYMDPNRSP-------DDVVDESC-------------WSDLEFCKNT   59 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~-------~~~~~E~~-------------~~~~~~~~~~   59 (178)
                      +++|+.|+..+++++...  .-.++|++||+++..+.+...+       .....+..             .........+
T Consensus       109 ~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (275)
T d1wmaa1         109 MKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWP  188 (275)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccchhhhccccccchhcccccccccCCCc
Confidence            578999999999998753  2358999999765443221110       00000000             0000001235


Q ss_pred             CchHHHHHHHHHHHHHHHHHh-------cCCcEEEecCCcee
Q 030406           60 KNWYCYGKAVAEKAAWEEAVA-------RGVDLVVVNPVLVL   94 (178)
Q Consensus        60 ~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~i~R~~~v~   94 (178)
                      ...|+.||.....+.+.++.+       .++.+..+.||.|-
T Consensus       189 ~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~  230 (275)
T d1wmaa1         189 SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR  230 (275)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeccccc
Confidence            567999999988876554433       37889999999883

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.14  E-value=0.07  Score=36.84  Aligned_cols=126  Identities=9%  Similarity=0.032  Sum_probs=74.7

Q ss_pred             chhHHHHHHHHHHHHHhCC--CCEEEEeccccccccCCCCCCCCccCCCCCCchhhhcccCchHHHHHHHHHHHHHHH--
Q 030406            2 VEPAVIGTKNVIVAAAEAK--VRRVVFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTKNWYCYGKAVAEKAAWEE--   77 (178)
Q Consensus         2 ~~~nv~~t~~ll~~~~~~~--~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~--   77 (178)
                      +++|+.++..++.++....  -...+.+++.+....                    .......|..+|...+.+.+..  
T Consensus       149 ~~vn~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--------------------~~~~~~~y~~aKaa~~~l~~~~a~  208 (297)
T d1d7oa_         149 ISASSYSFVSLLSHFLPIMNPGGASISLTYIASERI--------------------IPGYGGGMSSAKAALESDTRVLAF  208 (297)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSC--------------------CTTCTTTHHHHHHHHHHHHHHHHH
T ss_pred             ccchhhhhhhhhhHHHHHhhcCCcceeeeehhhccc--------------------ccccccceecccccccccccccch
Confidence            5789999999998887542  234555555332211                    0123456999998888776543  


Q ss_pred             --HHhcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHHHHhhcC--CCCCCcE-EE
Q 030406           78 --AVARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAHILVYET--PSASGRY-LC  152 (178)
Q Consensus        78 --~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~~~~-~~  152 (178)
                        +.++|+++-.+.||.+-.+.....  .....+.+......| .    .-+...+|++++++.++..  .-..|.. .+
T Consensus       209 e~~~~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~~~P-l----gR~~~peevA~~v~fL~S~~a~~itGq~i~v  281 (297)
T d1d7oa_         209 EAGRKQNIRVNTISAGPLGSRAAKAI--GFIDTMIEYSYNNAP-I----QKTLTADEVGNAAAFLVSPLASAITGATIYV  281 (297)
T ss_dssp             HHHHHHCCEEEEEEECCCBCCCSSCC--SHHHHHHHHHHHHSS-S----CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred             hccccceEEecccccccccchhhhhc--cCCHHHHHHHHhCCC-C----CCCCCHHHHHHHHHHHhCchhcCCcCceEEE
Confidence              344689999999999965543321  112222222222211 1    1246799999999999854  3345644 45


Q ss_pred             ec
Q 030406          153 AE  154 (178)
Q Consensus       153 ~~  154 (178)
                      .+
T Consensus       282 DG  283 (297)
T d1d7oa_         282 DN  283 (297)
T ss_dssp             ST
T ss_pred             Cc
Confidence            43

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=94.06  E-value=0.17  Score=34.15  Aligned_cols=91  Identities=15%  Similarity=0.063  Sum_probs=52.5

Q ss_pred             CchHHHHHHHHHHHHHHHHHh---cCCcEEEecCCceeCCCCC----CCCh----hhHHHHHHHHhCCccccCCCCcccc
Q 030406           60 KNWYCYGKAVAEKAAWEEAVA---RGVDLVVVNPVLVLGPLLQ----STVN----ASIIHILKYLNGSAKTYANSVQAYV  128 (178)
Q Consensus        60 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~R~~~v~G~~~~----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i  128 (178)
                      ...|+.+|...+.+.+.++.+   .|+++-.+.||.+-.+...    ....    .....+.......    ....+.+.
T Consensus       157 ~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~pl~rr~~  232 (268)
T d2h7ma1         157 YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQR----APIGWNMK  232 (268)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHH----CTTCCCTT
T ss_pred             cchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhc----CCCCCCCC
Confidence            467999999999998876554   3788889999988543110    0000    0011111111100    01234467


Q ss_pred             cHHHHHHHHHHhhcCC--CCCCcE-EEec
Q 030406          129 HVRDVALAHILVYETP--SASGRY-LCAE  154 (178)
Q Consensus       129 ~v~D~a~~~~~~~~~~--~~~~~~-~~~~  154 (178)
                      .++|+++++..++...  ...|.. .+.+
T Consensus       233 ~p~dva~~v~fL~Sd~a~~iTG~~i~vDG  261 (268)
T d2h7ma1         233 DATPVAKTVCALLSDWLPATTGDIIYADG  261 (268)
T ss_dssp             CCHHHHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred             CHHHHHHHHHHHhCchhcCccCCEEEECc
Confidence            7999999999988532  235544 4544

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=93.06  E-value=0.75  Score=30.68  Aligned_cols=86  Identities=15%  Similarity=0.066  Sum_probs=54.6

Q ss_pred             cCchHHHHHHHHHHHHHHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHH
Q 030406           59 TKNWYCYGKAVAEKAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVAL  135 (178)
Q Consensus        59 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  135 (178)
                      ....|+.+|...+.+.+..+.+   .|+++..+.||.+.-+....     .. .........+ .   .+-+...+|+++
T Consensus       168 ~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~-----~~-~~~~~~~~~p-l---~r~~~~peeva~  237 (266)
T d1mxha_         168 GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP-----QE-TQEEYRRKVP-L---GQSEASAAQIAD  237 (266)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC-----HH-HHHHHHTTCT-T---TSCCBCHHHHHH
T ss_pred             chhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC-----HH-HHHHHHhcCC-C---CCCCCCHHHHHH
Confidence            4577999999999998876554   57899999999875433211     11 1222222221 1   123457999999


Q ss_pred             HHHHhhcCCC--CCCc-EEEec
Q 030406          136 AHILVYETPS--ASGR-YLCAE  154 (178)
Q Consensus       136 ~~~~~~~~~~--~~~~-~~~~~  154 (178)
                      +++.++....  ..|. +.+.|
T Consensus       238 ~v~fL~s~~s~~itG~~i~vDG  259 (266)
T d1mxha_         238 AIAFLVSKDAGYITGTTLKVDG  259 (266)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhCchhCCccCCeEEECc
Confidence            9999996543  4564 45644

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=91.64  E-value=1.2  Score=29.83  Aligned_cols=89  Identities=18%  Similarity=0.133  Sum_probs=53.5

Q ss_pred             cCchHHHHHHHHHHHHHHHHHh---cCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHH
Q 030406           59 TKNWYCYGKAVAEKAAWEEAVA---RGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVAL  135 (178)
Q Consensus        59 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  135 (178)
                      ....|+.+|...+.+.+..+.+   .|+++-.+.||.+.-+.......  ...........     ....-+...+|+++
T Consensus       153 ~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~--~~~~~~~~~~~-----~p~~r~~~pedIA~  225 (274)
T d2pd4a1         153 HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD--FRMILKWNEIN-----APLRKNVSLEEVGN  225 (274)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT--HHHHHHHHHHH-----STTSSCCCHHHHHH
T ss_pred             cchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCc--hHHHHHHHhhh-----hhccCCcCHHHHHH
Confidence            4467999999999987765443   47899999999886543222111  11111111111     11234567999999


Q ss_pred             HHHHhhcCCC--CCCc-EEEec
Q 030406          136 AHILVYETPS--ASGR-YLCAE  154 (178)
Q Consensus       136 ~~~~~~~~~~--~~~~-~~~~~  154 (178)
                      ++..++....  ..|. +.+.+
T Consensus       226 ~v~fL~S~~s~~itG~~i~vDG  247 (274)
T d2pd4a1         226 AGMYLLSSLSSGVSGEVHFVDA  247 (274)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhChhhCCCcCceEEECC
Confidence            9999886532  3554 44543

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=88.61  E-value=0.75  Score=30.53  Aligned_cols=88  Identities=16%  Similarity=0.108  Sum_probs=47.0

Q ss_pred             chHHHHHHHHHHHHHHHHH---hcCCcEEEecCCceeCCCCCCCChhhHHHHHHHHhCCccccCCCCcccccHHHHHHHH
Q 030406           61 NWYCYGKAVAEKAAWEEAV---ARGVDLVVVNPVLVLGPLLQSTVNASIIHILKYLNGSAKTYANSVQAYVHVRDVALAH  137 (178)
Q Consensus        61 ~~Y~~sK~~~E~~~~~~~~---~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  137 (178)
                      ..|+.+|...+.+.+.++.   .+|+++-.+.||.+-.+.......  -.............    ..-+...+|+++++
T Consensus       153 ~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~--~~~~~~~~~~~~~P----lgR~g~p~eva~~v  226 (257)
T d1fjha_         153 LAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ--DPRYGESIAKFVPP----MGRRAEPSEMASVI  226 (257)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------CCCS----TTSCCCTHHHHHHH
T ss_pred             HHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcC--CHHHHHHHHhcCCC----CCCCcCHHHHHHHH
Confidence            4599999999999887653   447999999999885432111000  00001111111101    11245789999999


Q ss_pred             HHhhcCC--CCCCcE-EEec
Q 030406          138 ILVYETP--SASGRY-LCAE  154 (178)
Q Consensus       138 ~~~~~~~--~~~~~~-~~~~  154 (178)
                      ..++...  -..|.. .+.|
T Consensus       227 ~fL~S~~s~~itG~~i~vDG  246 (257)
T d1fjha_         227 AFLMSPAASYVHGAQIVIDG  246 (257)
T ss_dssp             HHHTSGGGTTCCSCEEEEST
T ss_pred             HHHhCchhCCccCceEEeCC
Confidence            9988543  345644 4544