Citrus Sinensis ID: 030564

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-----
MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR
cHHHHHHHHcccccccccccccccEEEEEEEccccEEEccccEEcccccccccEEEECccccccEEEEEEEcccccccccccccEEEEEEEcccccccccccccEEEECcccccccccccEEEEEEEccccccccccccccccccHHHHHHHccccccEEEEEEEEEEccccccc
*****DALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLLFKQKRRQ****VPASRDRFNTRKFAEENDLGLPVAAVFFNAQR*******
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MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protein CENTRORADIALIS-like May form complexes with phosphorylated ligands by interfering with kinases and their effectors (By similarity). Can substitute for TERMINAL FLOWER 1 (in vitro).confidentQ9ZNV5
Protein SELF-PRUNING Not known. In plants homozygous for the recessive allele of the SP gene, sympodial segments develop progressively fewer nodes until the shoot is terminated by two consecutive. inflorescences.probableO82088
Protein CENTRORADIALIS Expression of CEN leads to a morphological switch between shoot growth and the development of flower structures (inflorescence). May form complexes with phosphorylated ligands by interfering with kinases and their effectors.probableQ41261

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1WKO, chain A
Confidence level:very confident
Coverage over the Query: 3-169
View the alignment between query and template
View the model in PyMOL