Citrus Sinensis ID: 030564

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-----
Protein Sequence
MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR
Secondary Structure (PSIPRED)
cHHHHHHHHcccccccccccccccEEEEEEEccccEEEccccEEcccccccccEEEEEccccccEEEEEEEcccccccccccccEEEEEEEcccccccccccccEEEEEcccccccccccEEEEEEEccccccccccccccccccHHHHHHHHcccccEEEEEEEEEEccccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEcEEEccccccccccEEEEEEEccccEEEEcccEEccccEccccEEEEcccccccEEEEEEEcccccccccccHHHHHHEEEEccccccccccccEEEEccccccccccEEEEEEEEEcccccEEEccccccccccHHHHHHHccccccEEEEEEEcccccccccc
Coil and Loop (DISEMBL)
MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQvynghemfpsqvtqkpkvevlggdmRSFFTLImtdpdvpgpsdpylrEHLHWIVtdipgttdasfgkevvnyeiprpnigiHRFVFLLFKQKRrqtemsvpasrdrfntrkfaeendlglpvAAVFFNAQRETAARRR
Flexible Loop (DISEMBL)
makmsdalvLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYeiprpnigiHRFVFLLFKQKrrqtemsvpasrdrfntrkfaeendlglpvaavffnaqretaarrr
Low Complexity Region (SEG)
MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR
Disordered region (IsUnstruct)
******ALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLLFKQ*************************DLGLPVAAVFFN**********
Disordered Region (DISOPRED)
*****DALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLLFKQKRRQ****VPASRDRFNTRKFAEENDLGLPVAAVFFNAQRET*****
Disordered Region (DISEMBL)
MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLLFKQKR*********SRDRFNTRKFAEENDLGLPVAAVFFNAQ********
Disordered Region (DISPRO)
*****DALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQR*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	175	2.2.26 [Sep-21-2011]
Q9XH43	175	CEN-like protein 2 OS=Nic	N/A	no	0.988	0.988	0.816	5e-83
Q9XH42	175	CEN-like protein 4 OS=Nic	N/A	no	0.988	0.988	0.810	2e-82
O82088	175	Protein SELF-PRUNING OS=S	N/A	no	0.988	0.988	0.775	9e-79
Q9ZNV5	175	Protein CENTRORADIALIS-li	yes	no	0.994	0.994	0.772	1e-76
Q41261	181	Protein CENTRORADIALIS OS	N/A	no	0.977	0.944	0.76	6e-75
P93003	177	Protein TERMINAL FLOWER 1	no	no	0.982	0.971	0.695	3e-70
Q9XH44	174	CEN-like protein 1 OS=Nic	N/A	no	0.982	0.988	0.649	1e-64
Q9FIT4	177	Protein BROTHER of FT and	no	no	0.994	0.983	0.582	7e-57
Q93WI9	179	Protein HEADING DATE 3A O	no	no	0.954	0.932	0.594	5e-53
Q9SXZ2	175	Protein FLOWERING LOCUS T	no	no	0.971	0.971	0.543	2e-50

>sp|Q9XH43|CET2_TOBAC CEN-like protein 2 OS=Nicotiana tabacum GN=CET2 PE=2 SV=1

 Score =  306 bits (784), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 142/174 (81%), Positives = 159/174 (91%), Gaps = 1/174 (0%)

Query: 2   AKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGD 61
           +KMSD LV+GRV+GEV+DYFTPSVKM++TY+S K  VYNGHE+FPS VT KP+VEV GGD
Sbjct: 3   SKMSDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKH-VYNGHELFPSSVTSKPRVEVHGGD 61

Query: 62  MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRF 121
           +RSFFT+IM DPDVPGPSDPYLREHLHWIVTDIPGTTD SFGKE+V YE+PRPNIGIHRF
Sbjct: 62  LRSFFTMIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGKEIVGYEMPRPNIGIHRF 121

Query: 122 VFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           VFLLFKQK+RQT ++ P SRDRFNTRKFAEEN+LG PVAAVFFN QRETAARRR
Sbjct: 122 VFLLFKQKKRQTVLTAPLSRDRFNTRKFAEENELGSPVAAVFFNCQRETAARRR 175

May form complexes with phosphorylated ligands by interfering with kinases and their effectors.
Nicotiana tabacum (taxid: 4097)

>sp|Q9XH42|CET4_TOBAC CEN-like protein 4 OS=Nicotiana tabacum GN=CET4 PE=2 SV=1

 Score =  304 bits (779), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 141/174 (81%), Positives = 158/174 (90%), Gaps = 1/174 (0%)

Query: 2   AKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGD 61
           +KMSD LV+GRV+GEV+DYFTPSVKM++TY+S K  VYNGHE+FPS VT KP+VEV GGD
Sbjct: 3   SKMSDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKH-VYNGHELFPSSVTSKPRVEVHGGD 61

Query: 62  MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRF 121
           +RSFFTLIM DPDVPGPSDPYLREHLHWIVTDIPGTTD SFG+E+V YE+PRPNIGIHRF
Sbjct: 62  LRSFFTLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREIVGYEMPRPNIGIHRF 121

Query: 122 VFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           VFLLFKQK+RQT +S P SRDRFNTRKF+EEN+LG PVAA FFN QRETAARRR
Sbjct: 122 VFLLFKQKKRQTLLSAPLSRDRFNTRKFSEENELGSPVAAAFFNCQRETAARRR 175

May form complexes with phosphorylated ligands by interfering with kinases and their effectors.

Nicotiana tabacum (taxid: 4097)

>sp|O82088|SELFP_SOLLC Protein SELF-PRUNING OS=Solanum lycopersicum GN=SP PE=2 SV=1

 Score =  292 bits (747), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 135/174 (77%), Positives = 154/174 (88%), Gaps = 1/174 (0%)

Query: 2   AKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGD 61
           +KM + LV+GRV+GEV+DYF PSVKM++ Y++ K  VYNGHE FPS VT KP+VEV GGD
Sbjct: 3   SKMCEPLVIGRVIGEVVDYFCPSVKMSVVYNNNKH-VYNGHEFFPSSVTSKPRVEVHGGD 61

Query: 62  MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRF 121
           +RSFFTLIM DPDVPGPSDPYLREHLHWIVTDIPGTTD SFG+EVV YE+PRPNIGIHRF
Sbjct: 62  LRSFFTLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREVVGYEMPRPNIGIHRF 121

Query: 122 VFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           VFLLFKQK+RQT  S P SRD+F++RKF+EEN+LG PVAAVFFN QRETAARRR
Sbjct: 122 VFLLFKQKKRQTISSAPVSRDQFSSRKFSEENELGSPVAAVFFNCQRETAARRR 175

Not known. In plants homozygous for the recessive allele of the SP gene, sympodial segments develop progressively fewer nodes until the shoot is terminated by two consecutive. inflorescences.

Solanum lycopersicum (taxid: 4081)

>sp|Q9ZNV5|CEN_ARATH Protein CENTRORADIALIS-like OS=Arabidopsis thaliana GN=CEN PE=2 SV=1

 Score =  285 bits (729), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 136/176 (77%), Positives = 157/176 (89%), Gaps = 2/176 (1%)

Query: 1   MAKMS-DALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLG 59
           MA++S D L++GRV+G+V+D    +VKMT+TY+S KQ VYNGHE+FPS VT KPKVEV G
Sbjct: 1   MARISSDPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQ-VYNGHELFPSVVTYKPKVEVHG 59

Query: 60  GDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIH 119
           GDMRSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTD SFGKE++ YE+PRPNIGIH
Sbjct: 60  GDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIH 119

Query: 120 RFVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           RFV+LLFKQ RR + +SVP+ RD+FNTR+FA ENDLGLPVAAVFFN QRETAARRR
Sbjct: 120 RFVYLLFKQTRRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRETAARRR 175

May form complexes with phosphorylated ligands by interfering with kinases and their effectors (By similarity). Can substitute for TERMINAL FLOWER 1 (in vitro).

Arabidopsis thaliana (taxid: 3702)

>sp|Q41261|CEN_ANTMA Protein CENTRORADIALIS OS=Antirrhinum majus GN=CEN PE=1 SV=1

 Score =  279 bits (714), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 133/175 (76%), Positives = 151/175 (86%), Gaps = 4/175 (2%)

Query: 5   SDALVLGRVVGEVIDYFTPSVKMTITYSSIK--QQVYNGHEMFPSQVTQKPKVEVLGGDM 62
           SD LV+GRV+G+V+D+FT +VKM++ Y+S    + VYNGHE+FPS VT  P+VEV GGDM
Sbjct: 7   SDPLVIGRVIGDVVDHFTSTVKMSVIYNSNNSIKHVYNGHELFPSAVTSTPRVEVHGGDM 66

Query: 63  RSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFV 122
           RSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTD+SFGKEVV+YE+PRPNIGIHRFV
Sbjct: 67  RSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSSFGKEVVSYEMPRPNIGIHRFV 126

Query: 123 FLLFKQKRRQTEMSVP--ASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           FLLFKQK+R   M  P    RD FNTRKF +EN+LGLPVAAVFFN QRETAARRR
Sbjct: 127 FLLFKQKKRGQAMLSPPVVCRDGFNTRKFTQENELGLPVAAVFFNCQRETAARRR 181

Expression of CEN leads to a morphological switch between shoot growth and the development of flower structures (inflorescence). May form complexes with phosphorylated ligands by interfering with kinases and their effectors.

Antirrhinum majus (taxid: 4151)

>sp|P93003|TFL1_ARATH Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana GN=TFL1 PE=1 SV=1

 Score =  264 bits (674), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 121/174 (69%), Positives = 152/174 (87%), Gaps = 2/174 (1%)

Query: 2   AKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGD 61
            ++ + L++GRVVG+V+D+FTP+ KM ++Y+  K+QV NGHE+FPS V+ KP+VE+ GGD
Sbjct: 6   TRVIEPLIMGRVVGDVLDFFTPTTKMNVSYN--KKQVSNGHELFPSSVSSKPRVEIHGGD 63

Query: 62  MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRF 121
           +RSFFTL+M DPDVPGPSDP+L+EHLHWIVT+IPGTTDA+FGKEVV+YE+PRP+IGIHRF
Sbjct: 64  LRSFFTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRF 123

Query: 122 VFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           VF+LF+QK+R+       SRD FNTRKFA E DLGLPVAAVFFNAQRETAAR+R
Sbjct: 124 VFVLFRQKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177

Controls inflorescence meristem identity and is required for maintenance of a indeterminate inflorescence. Prevents the expression of 'APETALA1' and 'LEAFY'. Also plays a role in the regulation of the time of flowering in the long-day flowering pathway. May form complexes with phosphorylated ligands by interfering with kinases and their effectors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9XH44|CET1_TOBAC CEN-like protein 1 OS=Nicotiana tabacum GN=CET1 PE=2 SV=1

 Score =  245 bits (625), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 113/174 (64%), Positives = 143/174 (82%), Gaps = 2/174 (1%)

Query: 2   AKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGD 61
           +++ + LV+ RV+GEV+D F PSVK+ + Y+  KQ V+NGHE+ P+ +  KP+VE+ G D
Sbjct: 3   SRVVEPLVVARVIGEVVDSFNPSVKLNVIYNGSKQ-VFNGHELMPAVIAAKPRVEIGGED 61

Query: 62  MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRF 121
           MRS +TLIMTDPDVPGPSDPYLREHLHWIVTDIPG+TD+SFG+E+V+YE P+P IGIHR+
Sbjct: 62  MRSAYTLIMTDPDVPGPSDPYLREHLHWIVTDIPGSTDSSFGREIVSYESPKPVIGIHRY 121

Query: 122 VFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           V LL+KQ  RQT +   A+RD FNTR++  EN LG PVAAV+FNAQRETAARRR
Sbjct: 122 VLLLYKQSGRQT-VKPAATRDHFNTRRYTAENGLGSPVAAVYFNAQRETAARRR 174

May form complexes with phosphorylated ligands by interfering with kinases and their effectors.

Nicotiana tabacum (taxid: 4097)

>sp|Q9FIT4|BFT_ARATH Protein BROTHER of FT and TFL 1 OS=Arabidopsis thaliana GN=BFT PE=3 SV=1

 Score =  219 bits (558), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 102/175 (58%), Positives = 133/175 (76%), Gaps = 1/175 (0%)

Query: 1   MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGG 60
           M++  + L++GRV+G+V++ F PSV M +T++S    V NGHE+ PS +  KP+VE+ G 
Sbjct: 1   MSREIEPLIVGRVIGDVLEMFNPSVTMRVTFNS-NTIVSNGHELAPSLLLSKPRVEIGGQ 59

Query: 61  DMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHR 120
           D+RSFFTLIM DPD P PS+PY+RE+LHW+VTDIPGTTDASFG+E+V YE P+P  GIHR
Sbjct: 60  DLRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHR 119

Query: 121 FVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           +VF LFKQ+ RQ   + P +R+ FNT  F+    L  PVAAV+FNAQRETA RRR
Sbjct: 120 YVFALFKQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRETAPRRR 174

May form complexes with phosphorylated ligands by interfering with kinases and their effectors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q93WI9|HD3A_ORYSJ Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica GN=HD3A PE=1 SV=1

 Score =  206 bits (525), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 101/170 (59%), Positives = 125/170 (73%), Gaps = 3/170 (1%)

Query: 6   DALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSF 65
           D LV+GRVVG+V+D F  S  + +TY S  + V NG E+ PS VT +P+VEV G DMR+F
Sbjct: 9   DPLVVGRVVGDVLDAFVRSTNLKVTYGS--KTVSNGCELKPSMVTHQPRVEVGGNDMRTF 66

Query: 66  FTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLL 125
           +TL+M DPD P PSDP LRE+LHW+VTDIPGTT ASFG+EV+ YE PRP +GIHR VF+L
Sbjct: 67  YTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRPTMGIHRLVFVL 126

Query: 126 FKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           F+Q  RQT +  P  R  FNT+ FAE  +LG PVAAV+FN QRE  +  R
Sbjct: 127 FQQLGRQT-VYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGR 175

Probable mobile flower-promoting signal (florigen) that moves from the leaf to the shoot apical meristem (SAM) and induces flowering. Promotes the transition from vegetative growth to flowering downstream of HD1 and EHD1 under short day (SD) conditions. Acts upstream of MADS14 and MADS15.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SXZ2|FT_ARATH Protein FLOWERING LOCUS T OS=Arabidopsis thaliana GN=FT PE=1 SV=2

 Score =  198 bits (503), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 94/173 (54%), Positives = 126/173 (72%), Gaps = 3/173 (1%)

Query: 3   KMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDM 62
            + D L++ RVVG+V+D F  S+ + +TY   +++V NG ++ PSQV  KP+VE+ G D+
Sbjct: 4   NIRDPLIVSRVVGDVLDPFNRSITLKVTYG--QREVTNGLDLRPSQVQNKPRVEIGGEDL 61

Query: 63  RSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFV 122
           R+F+TL+M DPDVP PS+P+LRE+LHW+VTDIP TT  +FG E+V YE P P  GIHR V
Sbjct: 62  RNFYTLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVV 121

Query: 123 FLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           F+LF+Q  RQT +  P  R  FNTR+FAE  +LGLPVAAVF+N QRE+    R
Sbjct: 122 FILFRQLGRQT-VYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGR 173

Probable component of the mobile flower-promoting signal (floral stimulus or florigen). Promotes the transition from vegetative growth to flowering. Required for 'SEPALLATA3' (SEP3) and 'FRUITFULL' (FUL) accumulation in mature rosette leaves. Seems to acts in parallel with 'LEAFY' to induce flowering by regulating 'APETALA1'. May play a role in both the autonomous and the long-day flowering pathways.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
48474130	174	terminal flower 1 [Populus nigra] gi|484	0.994	1.0	0.822	4e-82
224132402	174	predicted protein [Populus trichocarpa]	0.994	1.0	0.822	4e-82
224102813	173	predicted protein [Populus trichocarpa]	0.988	1.0	0.84	1e-81
48474134	173	flowering locus T like protein [Populus	0.988	1.0	0.834	2e-81
17367231	175	RecName: Full=CEN-like protein 2 gi|5453	0.988	0.988	0.816	2e-81
17367229	175	RecName: Full=CEN-like protein 4 gi|5453	0.988	0.988	0.810	7e-81
158267646	174	terminal flower 1a [Gossypium hirsutum]	0.994	1.0	0.817	1e-80
339778485	173	terminal flowering 1 protein 1 [Populus	0.988	1.0	0.828	1e-80
158267638	174	terminal flower 1a [Gossypium hirsutum]	0.994	1.0	0.811	3e-80
158267642	174	terminal flower 1a [Gossypium raimondii]	0.994	1.0	0.817	3e-80

>gi|48474130|dbj|BAD22599.1| terminal flower 1 [Populus nigra] gi|48474132|dbj|BAD22600.1| terminal flower 1 [Populus nigra] gi|169990896|dbj|BAG12897.1| terminal flower 1 [Populus nigra]

 Score =  308 bits (790), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 144/175 (82%), Positives = 165/175 (94%), Gaps = 1/175 (0%)

Query: 1   MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGG 60
           MAKMS+ LV+GRV+G+VID+FT +VKMT+TY S ++QV+NGHE+FPS VT KPKVEV GG
Sbjct: 1   MAKMSEPLVVGRVIGDVIDHFTANVKMTVTYQSSRKQVFNGHELFPSAVTNKPKVEVHGG 60

Query: 61  DMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHR 120
           DMRSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTDA+FG+EV+NYE+PRPNIGIHR
Sbjct: 61  DMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVMNYEMPRPNIGIHR 120

Query: 121 FVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           FVFLLFKQK RQT ++ PASRD+FNTRKFAEEN+LGLPVAAVFFNAQRETAAR+R
Sbjct: 121 FVFLLFKQKGRQT-VTTPASRDKFNTRKFAEENELGLPVAAVFFNAQRETAARKR 174

Source: Populus nigra

Species: Populus nigra

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224132402|ref|XP_002328260.1| predicted protein [Populus trichocarpa] gi|37181069|gb|AAQ88444.1| CEN-like protein 1 [Populus trichocarpa] gi|38347690|dbj|BAD01610.1| terminal flower 1 [Populus nigra] gi|38347692|dbj|BAD01611.1| terminal flower 1 [Populus nigra] gi|222837775|gb|EEE76140.1| predicted protein [Populus trichocarpa]

 Score =  308 bits (790), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 144/175 (82%), Positives = 165/175 (94%), Gaps = 1/175 (0%)

Query: 1   MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGG 60
           MAKMS+ LV+GRV+G+VID+FT +VKMT+TY S ++QV+NGHE+FPS VT KPKVEV GG
Sbjct: 1   MAKMSEPLVVGRVIGDVIDHFTANVKMTVTYQSNRKQVFNGHELFPSAVTHKPKVEVHGG 60

Query: 61  DMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHR 120
           DMRSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTDA+FG+EV+NYE+PRPNIGIHR
Sbjct: 61  DMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVMNYEMPRPNIGIHR 120

Query: 121 FVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           FVFLLFKQK RQT ++ PASRD+FNTRKFAEEN+LGLPVAAVFFNAQRETAAR+R
Sbjct: 121 FVFLLFKQKGRQT-VTTPASRDKFNTRKFAEENELGLPVAAVFFNAQRETAARKR 174

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224102813|ref|XP_002312811.1| predicted protein [Populus trichocarpa] gi|222849219|gb|EEE86766.1| predicted protein [Populus trichocarpa]

 Score =  307 bits (786), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 147/175 (84%), Positives = 164/175 (93%), Gaps = 2/175 (1%)

Query: 1   MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGG 60
           MA +SD LV+GRV+G+VIDYFTP+VKMT+TY+S KQ VYNGHE+FPS VT KPKVEV GG
Sbjct: 1   MANLSDPLVVGRVIGDVIDYFTPNVKMTVTYNSNKQ-VYNGHELFPSAVTHKPKVEVHGG 59

Query: 61  DMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHR 120
           DMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDA+FG+EVVNYE+PRPNIGIHR
Sbjct: 60  DMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVVNYEMPRPNIGIHR 119

Query: 121 FVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           FV+LLF+QK RQT +S P+SRD+FNTRKFAEEN+L LPVAAVFFNAQRETAARRR
Sbjct: 120 FVYLLFRQKGRQT-VSTPSSRDKFNTRKFAEENELDLPVAAVFFNAQRETAARRR 173

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|48474134|dbj|BAD22601.1| flowering locus T like protein [Populus nigra] gi|48474136|dbj|BAD22602.1| flowering locus T like protein [Populus nigra] gi|48474189|dbj|BAD22675.1| flowering locus T like protein [Populus nigra] gi|48474191|dbj|BAD22676.1| flowering locus T like protein [Populus nigra] gi|339778465|gb|AEK06114.1| terminal flowering 1 protein 1 [Populus balsamifera] gi|339778467|gb|AEK06115.1| terminal flowering 1 protein 1 [Populus balsamifera] gi|339778469|gb|AEK06116.1| terminal flowering 1 protein 1 [Populus balsamifera] gi|339778471|gb|AEK06117.1| terminal flowering 1 protein 1 [Populus balsamifera] gi|339778473|gb|AEK06118.1| terminal flowering 1 protein 1 [Populus balsamifera] gi|339778475|gb|AEK06119.1| terminal flowering 1 protein 1 [Populus balsamifera] gi|339778477|gb|AEK06120.1| terminal flowering 1 protein 1 [Populus balsamifera] gi|339778479|gb|AEK06121.1| terminal flowering 1 protein 1 [Populus balsamifera] gi|339778481|gb|AEK06122.1| terminal flowering 1 protein 1 [Populus balsamifera] gi|339778483|gb|AEK06123.1| terminal flowering 1 protein 1 [Populus balsamifera]

 Score =  306 bits (784), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 146/175 (83%), Positives = 164/175 (93%), Gaps = 2/175 (1%)

Query: 1   MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGG 60
           MA +SD LV+GRV+G+VIDYFTP+VKMT+TY+S KQ VYNGHE+FPS VT KPKVEV GG
Sbjct: 1   MANLSDPLVVGRVIGDVIDYFTPNVKMTVTYNSNKQ-VYNGHELFPSAVTHKPKVEVHGG 59

Query: 61  DMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHR 120
           DMRSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTDA+FG+EVVNYE+PRPNIGIHR
Sbjct: 60  DMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVVNYEMPRPNIGIHR 119

Query: 121 FVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           FV+LLF+QK RQT +S P+SRD+FNTRKFAEEN+L LPVAAVFFNAQRETAARRR
Sbjct: 120 FVYLLFRQKGRQT-VSTPSSRDKFNTRKFAEENELDLPVAAVFFNAQRETAARRR 173

Source: Populus nigra

Species: Populus nigra

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|17367231|sp|Q9XH43.1|CET2_TOBAC RecName: Full=CEN-like protein 2 gi|5453316|gb|AAD43529.1|AF145260_1 CEN-like protein 2 [Nicotiana tabacum]

 Score =  306 bits (784), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 142/174 (81%), Positives = 159/174 (91%), Gaps = 1/174 (0%)

Query: 2   AKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGD 61
           +KMSD LV+GRV+GEV+DYFTPSVKM++TY+S K  VYNGHE+FPS VT KP+VEV GGD
Sbjct: 3   SKMSDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKH-VYNGHELFPSSVTSKPRVEVHGGD 61

Query: 62  MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRF 121
           +RSFFT+IM DPDVPGPSDPYLREHLHWIVTDIPGTTD SFGKE+V YE+PRPNIGIHRF
Sbjct: 62  LRSFFTMIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGKEIVGYEMPRPNIGIHRF 121

Query: 122 VFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           VFLLFKQK+RQT ++ P SRDRFNTRKFAEEN+LG PVAAVFFN QRETAARRR
Sbjct: 122 VFLLFKQKKRQTVLTAPLSRDRFNTRKFAEENELGSPVAAVFFNCQRETAARRR 175

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|17367229|sp|Q9XH42.1|CET4_TOBAC RecName: Full=CEN-like protein 4 gi|5453318|gb|AAD43530.1|AF145261_1 CEN-like protein 4 [Nicotiana tabacum]

 Score =  304 bits (779), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 141/174 (81%), Positives = 158/174 (90%), Gaps = 1/174 (0%)

Query: 2   AKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGD 61
           +KMSD LV+GRV+GEV+DYFTPSVKM++TY+S K  VYNGHE+FPS VT KP+VEV GGD
Sbjct: 3   SKMSDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKH-VYNGHELFPSSVTSKPRVEVHGGD 61

Query: 62  MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRF 121
           +RSFFTLIM DPDVPGPSDPYLREHLHWIVTDIPGTTD SFG+E+V YE+PRPNIGIHRF
Sbjct: 62  LRSFFTLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREIVGYEMPRPNIGIHRF 121

Query: 122 VFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           VFLLFKQK+RQT +S P SRDRFNTRKF+EEN+LG PVAA FFN QRETAARRR
Sbjct: 122 VFLLFKQKKRQTLLSAPLSRDRFNTRKFSEENELGSPVAAAFFNCQRETAARRR 175

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|158267646|gb|ABW24967.1| terminal flower 1a [Gossypium hirsutum] gi|164609093|gb|ABY62769.1| terminal flower 1a [Gossypium hirsutum]

 Score =  304 bits (778), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 143/175 (81%), Positives = 163/175 (93%), Gaps = 1/175 (0%)

Query: 1   MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGG 60
           MAK+SD LVLGRV+G+VID  +PSVKM++T+++ KQ VYNGHE FPS VT KPKVEV GG
Sbjct: 1   MAKLSDPLVLGRVIGDVIDALSPSVKMSVTFNTNKQ-VYNGHEFFPSAVTNKPKVEVHGG 59

Query: 61  DMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHR 120
           DMRSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTDA+FG+E+VNYE+PRPNIGIHR
Sbjct: 60  DMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREMVNYEMPRPNIGIHR 119

Query: 121 FVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           FVFLLFKQK RQT  S+P+SRDRF+TRKFAEEN+LG+PVAAV+FNAQRETAARRR
Sbjct: 120 FVFLLFKQKGRQTVRSIPSSRDRFDTRKFAEENELGVPVAAVYFNAQRETAARRR 174

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|339778485|gb|AEK06124.1| terminal flowering 1 protein 1 [Populus balsamifera] gi|339778487|gb|AEK06125.1| terminal flowering 1 protein 1 [Populus balsamifera] gi|339778489|gb|AEK06126.1| terminal flowering 1 protein 1 [Populus balsamifera] gi|339778491|gb|AEK06127.1| terminal flowering 1 protein 1 [Populus balsamifera] gi|339778493|gb|AEK06128.1| terminal flowering 1 protein 1 [Populus balsamifera] gi|339778495|gb|AEK06129.1| terminal flowering 1 protein 1 [Populus balsamifera] gi|339778497|gb|AEK06130.1| terminal flowering 1 protein 1 [Populus balsamifera] gi|339778499|gb|AEK06131.1| terminal flowering 1 protein 1 [Populus balsamifera]

 Score =  303 bits (777), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 145/175 (82%), Positives = 163/175 (93%), Gaps = 2/175 (1%)

Query: 1   MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGG 60
           MA +SD LV+GRV+G+VIDYFT +VKMT+TY+S KQ VYNGHE+FPS VT KPKVEV GG
Sbjct: 1   MANLSDPLVVGRVIGDVIDYFTQNVKMTVTYNSNKQ-VYNGHELFPSAVTHKPKVEVHGG 59

Query: 61  DMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHR 120
           DMRSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTDA+FG+EVVNYE+PRPNIGIHR
Sbjct: 60  DMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVVNYEMPRPNIGIHR 119

Query: 121 FVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           FV+LLF+QK RQT +S P+SRD+FNTRKFAEEN+L LPVAAVFFNAQRETAARRR
Sbjct: 120 FVYLLFRQKGRQT-VSTPSSRDKFNTRKFAEENELDLPVAAVFFNAQRETAARRR 173

Source: Populus balsamifera

Species: Populus balsamifera

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|158267638|gb|ABW24963.1| terminal flower 1a [Gossypium hirsutum] gi|158267652|gb|ABW24970.1| terminal flower 1a [Gossypium hirsutum]

 Score =  302 bits (774), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 142/175 (81%), Positives = 163/175 (93%), Gaps = 1/175 (0%)

Query: 1   MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGG 60
           MAK+SD LV+GRV+G+VID  +PSVKM++T+++ KQ VYNGHE FPS VT KPKVEV GG
Sbjct: 1   MAKLSDPLVVGRVIGDVIDALSPSVKMSVTFNTNKQ-VYNGHEFFPSAVTNKPKVEVHGG 59

Query: 61  DMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHR 120
           DMRSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTDA+FG+E+VNYE+PRPNIGIHR
Sbjct: 60  DMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREMVNYEMPRPNIGIHR 119

Query: 121 FVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           FVFLLFKQK RQT  S+P+SRDRF+TRKFAEEN+LG+PVAAV+FNAQRETAARRR
Sbjct: 120 FVFLLFKQKGRQTVRSIPSSRDRFDTRKFAEENELGVPVAAVYFNAQRETAARRR 174

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|158267642|gb|ABW24965.1| terminal flower 1a [Gossypium raimondii]

 Score =  302 bits (774), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 143/175 (81%), Positives = 162/175 (92%), Gaps = 1/175 (0%)

Query: 1   MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGG 60
           MAK+SD LVLGRV+G+VID  +PSVKM++T+++ KQ VYNGHE FPS VT KPKVEV GG
Sbjct: 1   MAKLSDPLVLGRVIGDVIDALSPSVKMSVTFNTNKQ-VYNGHEFFPSAVTNKPKVEVHGG 59

Query: 61  DMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHR 120
           DMRSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTDA+FG+E+VNYE+PRPNIGIHR
Sbjct: 60  DMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREMVNYEMPRPNIGIHR 119

Query: 121 FVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           FVFLLFKQK RQT  S+P+SRDRF TRKFAEEN+LG+PVAAV+FNAQRETAARRR
Sbjct: 120 FVFLLFKQKGRQTVRSIPSSRDRFYTRKFAEENELGVPVAAVYFNAQRETAARRR 174

Source: Gossypium raimondii

Species: Gossypium raimondii

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
TAIR|locus:2038643	175	ATC "centroradialis" [Arabidop	0.994	0.994	0.772	2.3e-71
UNIPROTKB|Q9XGS5	173	Fdr2 "Cen-like protein FDR2" [	0.988	1.0	0.748	3.3e-70
UNIPROTKB|Q6ESF8	173	P0605D08.14 "Os02g0531600 prot	0.988	1.0	0.748	7e-70
UNIPROTKB|Q9XGS4	173	Fdr1 "Cen-like protein FDR1" [	0.988	1.0	0.748	1.8e-69
TAIR|locus:2150595	177	TFL1 "TERMINAL FLOWER 1" [Arab	0.971	0.960	0.701	1.2e-65
TAIR|locus:2174058	177	BFT "brother of FT and TFL1" [	0.994	0.983	0.582	4.9e-53
UNIPROTKB|Q93WI9	179	HD3A "Protein HEADING DATE 3A"	0.954	0.932	0.594	6.7e-49
UNIPROTKB|Q93WM7	179	Hd3a "Hd3a protein" [Oryza sat	0.954	0.932	0.594	6.7e-49
TAIR|locus:2034168	175	FT "AT1G65480" [Arabidopsis th	0.954	0.954	0.552	4.2e-47
UNIPROTKB|Q8VWH2	178	HD3B "Protein HEADING DATE 3B"	0.954	0.938	0.552	7.9e-46

TAIR|locus:2038643 ATC "centroradialis" [Arabidopsis thaliana (taxid:3702)]

 Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
 Identities = 136/176 (77%), Positives = 157/176 (89%)

Query:     1 MAKMS-DALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLG 59
             MA++S D L++GRV+G+V+D    +VKMT+TY+S KQ VYNGHE+FPS VT KPKVEV G
Sbjct:     1 MARISSDPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQ-VYNGHELFPSVVTYKPKVEVHG 59

Query:    60 GDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIH 119
             GDMRSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTD SFGKE++ YE+PRPNIGIH
Sbjct:    60 GDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIH 119

Query:   120 RFVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
             RFV+LLFKQ RR + +SVP+ RD+FNTR+FA ENDLGLPVAAVFFN QRETAARRR
Sbjct:   120 RFVYLLFKQTRRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRETAARRR 175

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0005634 "nucleus" evidence=IDA

GO:0009910 "negative regulation of flower development" evidence=IMP

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IMP

UNIPROTKB|Q9XGS5 Fdr2 "Cen-like protein FDR2" [Oryza sativa (taxid:4530)]

 Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
 Identities = 131/175 (74%), Positives = 156/175 (89%)

Query:     1 MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGG 60
             M++  + LV+GRV+GEV+D F P +KM +TY+S K  V+NGHE++PS V  KP+VEV GG
Sbjct:     1 MSRSVEPLVVGRVIGEVLDTFNPCMKMIVTYNSNKL-VFNGHELYPSAVVSKPRVEVQGG 59

Query:    61 DMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHR 120
             D+RSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFG+EV++YE P+PNIGIHR
Sbjct:    60 DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREVISYESPKPNIGIHR 119

Query:   121 FVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
             F+F+LFKQKRRQT + VP+ RD FNTR+FAEENDLGLPVAAV+FNAQRETAARRR
Sbjct:   120 FIFVLFKQKRRQTVI-VPSFRDHFNTRRFAEENDLGLPVAAVYFNAQRETAARRR 173

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0010229 "inflorescence development" evidence=IGI

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IGI

UNIPROTKB|Q6ESF8 P0605D08.14 "Os02g0531600 protein" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
 Identities = 131/175 (74%), Positives = 156/175 (89%)

Query:     1 MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGG 60
             M+++ + L++G+V+GEV+D F P+VKMT TY + KQ V+NGHE FPS V  KP+VEV GG
Sbjct:     1 MSRVLEPLIVGKVIGEVLDNFNPTVKMTATYGANKQ-VFNGHEFFPSAVAGKPRVEVQGG 59

Query:    61 DMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHR 120
             D+RSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFG+EVV+YE PRPNIGIHR
Sbjct:    60 DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREVVSYESPRPNIGIHR 119

Query:   121 FVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
             F+ +LF+QKRRQ  +S P SRDRF+TR+FAE+NDLGLPVAAV+FNAQRETAARRR
Sbjct:   120 FILVLFRQKRRQA-VSPPPSRDRFSTRQFAEDNDLGLPVAAVYFNAQRETAARRR 173

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0010229 "inflorescence development" evidence=IMP

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

UNIPROTKB|Q9XGS4 Fdr1 "Cen-like protein FDR1" [Oryza sativa (taxid:4530)]

 Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
 Identities = 131/175 (74%), Positives = 154/175 (88%)

Query:     1 MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGG 60
             M++  + LV+GRV+GEVID F P  KM +TY+S K  V+NGHE +PS V  KP+VEV GG
Sbjct:     1 MSRSVEPLVVGRVIGEVIDSFNPCTKMIVTYNSNKL-VFNGHEFYPSAVVSKPRVEVQGG 59

Query:    61 DMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHR 120
             DMRSFFTL+MTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFG+E+++YE P+P+IGIHR
Sbjct:    60 DMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREIISYESPKPSIGIHR 119

Query:   121 FVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
             FVF+LFKQKRRQ  + VP+SRD FNTR+FAEEN+LGLPVAAV+FNAQRETAARRR
Sbjct:   120 FVFVLFKQKRRQAVV-VPSSRDHFNTRQFAEENELGLPVAAVYFNAQRETAARRR 173

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

TAIR|locus:2150595 TFL1 "TERMINAL FLOWER 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
 Identities = 122/174 (70%), Positives = 155/174 (89%)

Query:     3 KMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDM 62
             ++ + L++GRVVG+V+D+FTP+ KM ++Y+  K+QV NGHE+FPS V+ KP+VE+ GGD+
Sbjct:     7 RVIEPLIMGRVVGDVLDFFTPTTKMNVSYN--KKQVSNGHELFPSSVSSKPRVEIHGGDL 64

Query:    63 RSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFV 122
             RSFFTL+M DPDVPGPSDP+L+EHLHWIVT+IPGTTDA+FGKEVV+YE+PRP+IGIHRFV
Sbjct:    65 RSFFTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFV 124

Query:   123 FLLFKQKRRQTEM-SVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
             F+LF+QK+R+    ++P SRD FNTRKFA E DLGLPVAAVFFNAQRETAAR+R
Sbjct:   125 FVLFRQKQRRVIFPNIP-SRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0009744 "response to sucrose stimulus" evidence=IMP

GO:0009910 "negative regulation of flower development" evidence=IMP

GO:0005773 "vacuole" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006623 "protein targeting to vacuole" evidence=IMP

GO:0031982 "vesicle" evidence=IDA

GO:0090344 "negative regulation of cell aging" evidence=IMP

GO:0003712 "transcription cofactor activity" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

TAIR|locus:2174058 BFT "brother of FT and TFL1" [Arabidopsis thaliana (taxid:3702)]

 Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
 Identities = 102/175 (58%), Positives = 133/175 (76%)

Query:     1 MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGG 60
             M++  + L++GRV+G+V++ F PSV M +T++S    V NGHE+ PS +  KP+VE+ G 
Sbjct:     1 MSREIEPLIVGRVIGDVLEMFNPSVTMRVTFNS-NTIVSNGHELAPSLLLSKPRVEIGGQ 59

Query:    61 DMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHR 120
             D+RSFFTLIM DPD P PS+PY+RE+LHW+VTDIPGTTDASFG+E+V YE P+P  GIHR
Sbjct:    60 DLRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHR 119

Query:   121 FVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
             +VF LFKQ+ RQ   + P +R+ FNT  F+    L  PVAAV+FNAQRETA RRR
Sbjct:   120 YVFALFKQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRETAPRRR 174

GO:0005737 "cytoplasm" evidence=ISM

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0009908 "flower development" evidence=IMP

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IMP

UNIPROTKB|Q93WI9 HD3A "Protein HEADING DATE 3A" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
 Identities = 101/170 (59%), Positives = 125/170 (73%)

Query:     6 DALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSF 65
             D LV+GRVVG+V+D F  S  + +TY S  + V NG E+ PS VT +P+VEV G DMR+F
Sbjct:     9 DPLVVGRVVGDVLDAFVRSTNLKVTYGS--KTVSNGCELKPSMVTHQPRVEVGGNDMRTF 66

Query:    66 FTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLL 125
             +TL+M DPD P PSDP LRE+LHW+VTDIPGTT ASFG+EV+ YE PRP +GIHR VF+L
Sbjct:    67 YTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRPTMGIHRLVFVL 126

Query:   126 FKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
             F+Q  RQT +  P  R  FNT+ FAE  +LG PVAAV+FN QRE  +  R
Sbjct:   127 FQQLGRQT-VYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGR 175

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0009909 "regulation of flower development" evidence=IMP

GO:0010229 "inflorescence development" evidence=IMP

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0048572 "short-day photoperiodism" evidence=IMP

GO:0048575 "short-day photoperiodism, flowering" evidence=IMP

UNIPROTKB|Q93WM7 Hd3a "Hd3a protein" [Oryza sativa Indica Group (taxid:39946)]

 Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
 Identities = 101/170 (59%), Positives = 125/170 (73%)

Query:     6 DALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSF 65
             D LV+GRVVG+V+D F  S  + +TY S  + V NG E+ PS VT +P+VEV G DMR+F
Sbjct:     9 DPLVVGRVVGDVLDAFVRSTNLKVTYGS--KTVSNGCELKPSMVTHQPRVEVGGNDMRTF 66

Query:    66 FTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLL 125
             +TL+M DPD P PSDP LRE+LHW+VTDIPGTT ASFG+EV+ YE PRP +GIHR VF+L
Sbjct:    67 YTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRPTMGIHRLVFVL 126

Query:   126 FKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
             F+Q  RQT +  P  R  FNT+ FAE  +LG PVAAV+FN QRE  +  R
Sbjct:   127 FQQLGRQT-VYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGR 175

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0010229 "inflorescence development" evidence=IMP

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0048572 "short-day photoperiodism" evidence=IMP

TAIR|locus:2034168 FT "AT1G65480" [Arabidopsis thaliana (taxid:3702)]

 Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
 Identities = 94/170 (55%), Positives = 125/170 (73%)

Query:     6 DALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSF 65
             D L++ RVVG+V+D F  S+ + +TY   +++V NG ++ PSQV  KP+VE+ G D+R+F
Sbjct:     7 DPLIVSRVVGDVLDPFNRSITLKVTYG--QREVTNGLDLRPSQVQNKPRVEIGGEDLRNF 64

Query:    66 FTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLL 125
             +TL+M DPDVP PS+P+LRE+LHW+VTDIP TT  +FG E+V YE P P  GIHR VF+L
Sbjct:    65 YTLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFIL 124

Query:   126 FKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
             F+Q  RQT +  P  R  FNTR+FAE  +LGLPVAAVF+N QRE+    R
Sbjct:   125 FRQLGRQT-VYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGR 173

GO:0009911 "positive regulation of flower development" evidence=IMP

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0048573 "photoperiodism, flowering" evidence=IEP;RCA

GO:0009909 "regulation of flower development" evidence=IGI;RCA

GO:0010119 "regulation of stomatal movement" evidence=IMP

UNIPROTKB|Q8VWH2 HD3B "Protein HEADING DATE 3B" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
 Identities = 94/170 (55%), Positives = 124/170 (72%)

Query:     6 DALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSF 65
             D LV+GR+VG+V+D F     ++++Y +  + V NG E+ PS VTQ+P+V V G DMR+F
Sbjct:     8 DPLVVGRIVGDVLDPFVRITNLSVSYGA--RIVSNGCELKPSMVTQQPRVVVGGNDMRTF 65

Query:    66 FTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLL 125
             +TL+M DPD P PS+P LRE+LHW+VTDIPGTT A+FG+EV+ YE PRP +GIHR VF+L
Sbjct:    66 YTLVMVDPDAPSPSNPNLREYLHWLVTDIPGTTGATFGQEVMCYESPRPTMGIHRLVFVL 125

Query:   126 FKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
             F+Q  RQT +  P  R  F+TR FAE  +LG PVA V+FN QRE  +  R
Sbjct:   126 FQQLGRQT-VYAPGWRQNFSTRNFAELYNLGSPVATVYFNCQREAGSGGR 174

GO:0009909 "regulation of flower development" evidence=IMP

GO:0010229 "inflorescence development" evidence=IMP

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0048573 "photoperiodism, flowering" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9XH43	CET2_TOBAC	No assigned EC number	0.8160	0.9885	0.9885	N/A	no
Q9ZNV5	CEN_ARATH	No assigned EC number	0.7727	0.9942	0.9942	yes	no
O82088	SELFP_SOLLC	No assigned EC number	0.7758	0.9885	0.9885	N/A	no
Q9XH42	CET4_TOBAC	No assigned EC number	0.8103	0.9885	0.9885	N/A	no
Q9XH44	CET1_TOBAC	No assigned EC number	0.6494	0.9828	0.9885	N/A	no
Q41261	CEN_ANTMA	No assigned EC number	0.76	0.9771	0.9447	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	175
PLN00169	175	PLN00169, PLN00169, CETS family protein; Provision	2e-77
cd00866	154	cd00866, PEBP_euk, PhosphatidylEthanolamine-Bindin	4e-43
pfam01161	147	pfam01161, PBP, Phosphatidylethanolamine-binding p	9e-27
cd00457	159	cd00457, PEBP, PhosphatidylEthanolamine-Binding Pr	2e-22
COG1881	174	COG1881, COG1881, Phospholipid-binding protein [Ge	1e-04
cd00865	150	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-	2e-04

>gnl|CDD|177765 PLN00169, PLN00169, CETS family protein; Provisional

 Score =  227 bits (581), Expect = 2e-77
 Identities = 100/177 (56%), Positives = 130/177 (73%), Gaps = 5/177 (2%)

Query: 1   MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGG 60
             +  D LV+GRVVG+V+D FT S+ + +TY S  ++V NG E+ PSQV  +P+V++ G 
Sbjct: 2   SPRDRDPLVVGRVVGDVLDPFTRSISLRVTYGS--REVNNGCELKPSQVVNQPRVDIGGE 59

Query: 61  DMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHR 120
           D+R+F+TL+M DPD P PS+P LRE+LHW+VTDIP TT A+FG+EVV YE PRP  GIHR
Sbjct: 60  DLRTFYTLVMVDPDAPSPSNPNLREYLHWLVTDIPATTGATFGQEVVCYESPRPTAGIHR 119

Query: 121 FVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAA--RRR 175
           FVF+LF+Q  RQT +  P  R  FNTR FAE  +LG PVAAV+FN QRE+ +  RR 
Sbjct: 120 FVFVLFRQLGRQT-VYAPGWRQNFNTRDFAELYNLGSPVAAVYFNCQRESGSGGRRP 175

Length = 175

>gnl|CDD|176644 cd00866, PEBP_euk, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in eukaryotes

 Score =  140 bits (354), Expect = 4e-43
 Identities = 60/155 (38%), Positives = 80/155 (51%), Gaps = 14/155 (9%)

Query: 25  VKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRS-FFTLIMTDPDVPGPSDPYL 83
           V +T++Y S    V  G+ + PS+  + P V     D     +TL+M DPD P   DP  
Sbjct: 1   VDLTVSYGSSGV-VTPGNLLTPSETQKAPTVSFSSEDPPDKLYTLVMVDPDAPSRDDPKF 59

Query: 84  REHLHWIVTDIPGTTD----ASFGKEVVNYE--IPRPNIGIHRFVFLLFKQKRRQTE--- 134
           RE LHW+VT+IPG+       S G+ +V Y    P    G HR+VFLLFKQ         
Sbjct: 60  REWLHWLVTNIPGSDTTTGLVSKGEVLVPYLGPGPPKGTGPHRYVFLLFKQPGGLDFPES 119

Query: 135 ---MSVPASRDRFNTRKFAEENDLGLPVAAVFFNA 166
               +    R  F+ R+FA++N LGLPVAA FF  
Sbjct: 120 KLPPTSGLGRRGFDVREFAKKNGLGLPVAANFFQV 154

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in eukaryotes. Members here include those in plants such as Arabidopsis thaliana FLOWERING LOCUS (FT) and TERMINAL FLOWER1 (FT1) which function as a promoter and a repressor of the floral transitions, respectively as well as the mammalian Raf kinase inhibitory protein (RKIP) which inhibits MAP kinase (Raf-MEK-ERK), G protein-coupled receptor (GPCR) kinase and NFkappaB signaling cascades. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer). Length = 154

>gnl|CDD|216338 pfam01161, PBP, Phosphatidylethanolamine-binding protein

 Score = 98.3 bits (245), Expect = 9e-27
 Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 23/156 (14%)

Query: 24  SVKMTITYSSIKQQVYNGHEMFPSQVTQK-PKVEVLGGDMRSFFTLIMTDPDVPGPSDPY 82
              + + Y+     V  G+ + P       P +     D    + L+M DPD P  SDP 
Sbjct: 1   GGPLPVEYTGA--FVCPGNNLSPPLSWSDAPTIS----DGTKSYALVMVDPDAPSRSDPK 54

Query: 83  LREHLHWIVTDIPGTTDA----------SFGKEVVNYEIPRP--NIGIHRFVFLLFKQKR 130
             E LHW+VT+IP +              FG+ +  Y  P P    G HR+VFLL+    
Sbjct: 55  GSEFLHWLVTNIPASVTELPGGGVQGVNDFGQTLAGYIGPCPPPGTGPHRYVFLLYALD- 113

Query: 131 RQTEMSVPASRDRFNTRKFAEENDLGLP-VAAVFFN 165
              ++ +PA   R   R+  + + LG   +A  FF 
Sbjct: 114 --EKLDLPAGVTRAELREAFKGHVLGPATLAGNFFR 147

Length = 147

>gnl|CDD|176642 cd00457, PEBP, PhosphatidylEthanolamine-Binding Protein (PEBP) domain

 Score = 87.5 bits (217), Expect = 2e-22
 Identities = 34/155 (21%), Positives = 50/155 (32%), Gaps = 35/155 (22%)

Query: 41  GHEMFP----SQVTQKPKVEVLGGD-MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIP 95
           G  + P      V + P +   G       + L+M DPD P       R  +H +V  IP
Sbjct: 11  GSVLPPEYSFEGVGRFPSLSWDGPPPDVKEYVLVMEDPDAP-----LGRPIVHGLVYGIP 65

Query: 96  GTT------------DASFGKEVVN----------YEIPRPNI--GIHRFVFLLFKQKRR 131
                          +   G +             Y  PRP +  G HR+ F ++     
Sbjct: 66  ANKTSLSNDDFVVTDNGKGGLQGGFKYGKNRGGTVYIGPRPPLGHGPHRYFFQVYALDEP 125

Query: 132 QTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNA 166
                +   R +F   +FAE N LG  V       
Sbjct: 126 LDRSKLGDGRTKFEVARFAEGNVLG-AVGEWVGQF 159

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). A number of biological roles for members of the PEBP family include serine protease inhibition, membrane biogenesis, regulation of flowering plant stem architecture, and Raf-1 kinase inhibition. Although their overall structures are similar, the members of the PEBP family bind very different substrates including phospholipids, opioids, and hydrophobic odorant molecules as well as having different oligomerization states (monomer/dimer/tetramer). Length = 159

>gnl|CDD|224793 COG1881, COG1881, Phospholipid-binding protein [General function prediction only]

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 20/82 (24%), Positives = 27/82 (32%), Gaps = 26/82 (31%)

Query: 66  FTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDA------------------SFGKEVV 107
           F L + DPD P          +HW+V +IP                        FG    
Sbjct: 63  FALTVDDPDAPTGG-----GWVHWVVANIPADVTELPEGSGPKSKIGIVQGINDFGS--R 115

Query: 108 NYEIPRPNIG-IHRFVFLLFKQ 128
            Y  P P  G  HR+ F ++  
Sbjct: 116 GYGGPCPPKGHGHRYYFTVYAL 137

Length = 174

>gnl|CDD|176643 cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 27/81 (33%)

Query: 66  FTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDA-------------------SFGKEV 106
             LI+ DPD P           HW+V +IP  T                      FG+  
Sbjct: 42  LALIVEDPDAPTGGGFV-----HWVVWNIPADTTELPEGASRGALPAGAVQGRNDFGE-- 94

Query: 107 VNYEIPRP-NIGIHRFVFLLF 126
             Y  P P + G HR+VF ++
Sbjct: 95  AGYGGPCPPDGGPHRYVFTVY 115

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in bacterial and archaea. Members here include Escherichia coli YBHB and YBCL which are thought to regulate protein phosphorylation as well as Sulfolobus solfataricus SsCEI which inhibits serine proteases alpha-chymotrypsin and elastase. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer). In a few of the bacterial members present here the dimerization interface is proposed to form the ligand binding site, unlike in other PEBP members. Length = 150

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	175
PLN00169	175	CETS family protein; Provisional	100.0
KOG3346	185	consensus Phosphatidylethanolamine binding protein	100.0
cd00866	154	PEBP_euk PhosphatidylEthanolamine-Binding Protein	100.0
PF01161	146	PBP: Phosphatidylethanolamine-binding protein; Int	99.96
cd00457	159	PEBP PhosphatidylEthanolamine-Binding Protein (PEB	99.92
cd00865	150	PEBP_bact_arch PhosphatidylEthanolamine-Binding Pr	99.72
PRK10257	158	putative kinase inhibitor protein; Provisional	99.65
PRK09818	183	putative kinase inhibitor; Provisional	99.64
TIGR00481	141	Raf kinase inhibitor-like protein, YbhB/YbcL famil	99.63
COG1881	174	Phospholipid-binding protein [General function pre	99.62

>PLN00169 CETS family protein; Provisional

Probab=100.00  E-value=1e-53  Score=330.02  Aligned_cols=172  Identities=58%  Similarity=0.977  Sum_probs=160.9

Q ss_pred             CcccchhhhcCCcccccCCCCCCCeEEEEEECCCCeeecCCceeCCcccCCCCeEEEecCCCCcEEEEEEEcCCCCCCCC
Q 030564            1 MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSFFTLIMTDPDVPGPSD   80 (175)
Q Consensus         1 ~~~~~~~l~~~~iipdvl~~f~P~~~L~V~f~~~~~~v~~G~~l~~~~~~~~P~i~~~~~~~~~~ytlvmvDpD~p~~~~   80 (175)
                      |.+++++|.+++||||||+.|.|+..|.|.|++  ..|.+|+.|++++++++|+|+|.+.+.+++|||+|+|||+|++++
T Consensus         2 ~~~~~~~l~~~~iipdvid~f~P~~~L~V~y~s--~~V~~G~~l~p~~t~~~P~i~~~~~~~~~~ytlim~DpDaP~~~~   79 (175)
T PLN00169          2 SPRDRDPLVVGRVVGDVLDPFTRSISLRVTYGS--REVNNGCELKPSQVVNQPRVDIGGEDLRTFYTLVMVDPDAPSPSN   79 (175)
T ss_pred             CcccccchhhCCcCCcccCCcCCceEEEEEECC--cCcCCcCCCCHHHhccCCEEEEccCCCCceeEEEEECCCCCCCCC
Confidence            789999999999999999999999999999988  789999999999999999999988776899999999999999999


Q ss_pred             CCCceEEEEEEEccCCCcCCCCCeeeeeecCCCCCCCCCcEEEEEeeeCCCccccCCCCCCCCcCHHHHHHHhCCCCceE
Q 030564           81 PYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVA  160 (175)
Q Consensus        81 ~~~~~~lHwlv~ni~~~~~~~~g~~~~~Y~~P~P~~g~HRYvflL~~Q~~~~~~~~~~~~R~~F~~~~F~~~~~L~~Pva  160 (175)
                      +++++||||+++||+++.....|+++++|+||.|++|.|||+|+||+|++.+... .+..|.+||+++|++++||+.|||
T Consensus        80 ~~~~~~~HW~v~nip~~~~~~~g~~~~~Y~~P~Pp~G~HRYvflly~Q~~~~~~~-~~~~R~~F~~~~Fa~~~~L~~PvA  158 (175)
T PLN00169         80 PNLREYLHWLVTDIPATTGATFGQEVVCYESPRPTAGIHRFVFVLFRQLGRQTVY-APGWRQNFNTRDFAELYNLGSPVA  158 (175)
T ss_pred             CCcccEEEEEEeCCccccccccCccceeecCCCCCCCceeEEEEEEEcCCCcccC-CcccCCCcCHHHHHHHhCCCCceE
Confidence            9999999999999998755567999999999999999999999999999887654 467899999999999999999999


Q ss_pred             EEEEEEeeCCCCCCC
Q 030564          161 AVFFNAQRETAARRR  175 (175)
Q Consensus       161 ~~~f~~~~d~~~~~~  175 (175)
                      ||||+++|++..++|
T Consensus       159 ~nfF~a~~~~~~~~~  173 (175)
T PLN00169        159 AVYFNCQRESGSGGR  173 (175)
T ss_pred             EEEEEEecCCcCCcc
Confidence            999999999988775

>KOG3346 consensus Phosphatidylethanolamine binding protein [General function prediction only]

Probab=100.00  E-value=8e-54  Score=330.64  Aligned_cols=174  Identities=48%  Similarity=0.771  Sum_probs=164.0

Q ss_pred             CcccchhhhcCCcccccCCCCCCCeEEEEEECCCCeeecCCceeCCcccCCCCeEEEecC-CCCcEEEEEEEcCCCCCCC
Q 030564            1 MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGG-DMRSFFTLIMTDPDVPGPS   79 (175)
Q Consensus         1 ~~~~~~~l~~~~iipdvl~~f~P~~~L~V~f~~~~~~v~~G~~l~~~~~~~~P~i~~~~~-~~~~~ytlvmvDpD~p~~~   79 (175)
                      |....+.+.+++|++|+|+.+.|++.|+|.|+++ ..|++|+.|++++++++|+|+|.+. +.+++|||+|+|||||+++
T Consensus         1 ~~~~~~~~~~~~iv~Dvl~~~~p~~~l~V~y~~~-~~v~~G~~l~pt~~~~~P~v~~~~~a~~~~~yTLvm~DPDaPsr~   79 (185)
T KOG3346|consen    1 MSDIRDPLNKHRIVPDVLDDFEPSVKLNVTYNSD-IVVENGNELTPTQVKNRPIVSWDGFADPGSLYTLVMTDPDAPSRS   79 (185)
T ss_pred             CcchhhhhhccCcchhhhccCCCceEEEEEeCCC-eeecCCCEeCchhhccCCeEEEcCcCCCCCeEEEEEeCCCCCCCC
Confidence            6678899999999999999999999999999997 8999999999999999999999985 7789999999999999999


Q ss_pred             CCCCceEEEEEEEccCCCcCCCCCeeeeeecCCCC--CCCCCcEEEEEeeeCCCccccC-CCCCCCCcCHHHHHHHhCCC
Q 030564           80 DPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRP--NIGIHRFVFLLFKQKRRQTEMS-VPASRDRFNTRKFAEENDLG  156 (175)
Q Consensus        80 ~~~~~~~lHwlv~ni~~~~~~~~g~~~~~Y~~P~P--~~g~HRYvflL~~Q~~~~~~~~-~~~~R~~F~~~~F~~~~~L~  156 (175)
                      +|++++|||||++||+++.++++|++++.|+||.|  |+|.|||+|+||+|+.+..... .+..|.+|++++|+++++|+
T Consensus        80 ~p~~rE~lHWlV~nIPg~~~~~~G~~i~~Y~~P~Pp~~tG~HRyVfll~rQ~~~~~~~~~~~~~R~~F~~~~F~~~~~lg  159 (185)
T KOG3346|consen   80 DPKFREWLHWLVTNIPGTDGISKGQEISEYLGPGPPKGTGLHRYVFLLYRQPGRLDSDEPSPLSRGNFNTRKFAKKYELG  159 (185)
T ss_pred             CCcceeEEEEEEEeecCCccccCCeEeeeeeCCCCCCCCCceEEEEEEEEcCCccccccCCCCcccceeHHHHHHHhccC
Confidence            99999999999999999977999999999999999  7999999999999999988754 46899999999999999999


Q ss_pred             CceEEEEEEEeeCCCCCCC
Q 030564          157 LPVAAVFFNAQRETAARRR  175 (175)
Q Consensus       157 ~Pva~~~f~~~~d~~~~~~  175 (175)
                      .|||++||+++||+..++|
T Consensus       160 ~PvA~~~f~aq~d~~~~~~  178 (185)
T KOG3346|consen  160 TPVAGNFFQAQWDDYVPKL  178 (185)
T ss_pred             CchhhheehhhcchhhHHH
Confidence            9999999999999987653

>cd00866 PEBP_euk PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in eukaryotes

Probab=100.00  E-value=3.9e-39  Score=244.26  Aligned_cols=140  Identities=43%  Similarity=0.726  Sum_probs=128.3

Q ss_pred             EEEEEECCCCeeecCCceeCCcccCCCCeEEEecCC-CCcEEEEEEEcCCCCCCCCCCCceEEEEEEEccCCCcC----C
Q 030564           26 KMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGD-MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTD----A  100 (175)
Q Consensus        26 ~L~V~f~~~~~~v~~G~~l~~~~~~~~P~i~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwlv~ni~~~~~----~  100 (175)
                      .|.|.|+++ ..+.+|+.|++++++.+|+|+|.... .+++|+|+|+|||+|.+.++.+++|||||++||+++..    .
T Consensus         2 ~l~v~y~~~-~~v~~G~~l~~~~~~~~P~i~~~~~~~~~~~y~lvm~DpD~p~~~~~~~~~~lHwl~~ni~~~~~~~~~~   80 (154)
T cd00866           2 DLTVSYGSS-GVVTPGNLLTPSETQKAPTVSFSSEDPPDKLYTLVMVDPDAPSRDDPKFREWLHWLVTNIPGSDTTTGLV   80 (154)
T ss_pred             eEEEEECCC-cCcCCCCCCCHHHhCcCCeEEEecCCCCCCeEEEEEECCCCCCCCCCCCCCEEEEEEeCcCCcccccccc
Confidence            689999985 78999999999999999999999886 68999999999999999999999999999999998743    4


Q ss_pred             CCCeeeeeecCCCC--CCCCCcEEEEEeeeCCCccccC------CCCCCCCcCHHHHHHHhCCCCceEEEEEEE
Q 030564          101 SFGKEVVNYEIPRP--NIGIHRFVFLLFKQKRRQTEMS------VPASRDRFNTRKFAEENDLGLPVAAVFFNA  166 (175)
Q Consensus       101 ~~g~~~~~Y~~P~P--~~g~HRYvflL~~Q~~~~~~~~------~~~~R~~F~~~~F~~~~~L~~Pva~~~f~~  166 (175)
                      +.|..+++|+||+|  |+|.|||+|+||+|+..+....      ....|.+||+++|++++||+.|||+|||++
T Consensus        81 ~~~~~~~~Y~~P~Pp~g~g~HRY~fll~~q~~~~~~~~~~~~~~~~~~r~~F~~~~F~~~~~L~~pva~~~f~~  154 (154)
T cd00866          81 SKGEVLVPYLGPGPPKGTGPHRYVFLLFKQPGGLDFPESKLPPTSGLGRRGFDVREFAKKNGLGLPVAANFFQV  154 (154)
T ss_pred             CCCCCcceeeCCCCCCCCCCccEEEEEEEeCCccCccccccccCCccccCCcCHHHHHHHhCCCCcEEEEEEeC
Confidence            56889999999999  7899999999999999988764      257899999999999999999999999985

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in eukaryotes. Members here include those in plants such as Arabidopsis thaliana FLOWERING LOCUS (FT) and TERMINAL FLOWER1 (FT1) which function as a promoter and a repressor of the floral transitions, respectively as well as the mammalian Raf kinase inhibitory protein (RKIP) which inhibits MAP kinase (Raf-MEK-ERK), G protein-coupled receptor (GPCR) kinase and NFkappaB signaling cascades. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer).

>PF01161 PBP: Phosphatidylethanolamine-binding protein; InterPro: IPR008914 The PEBP (PhosphatidylEthanolamine-Binding Protein) family is a highly conserved group of proteins that have been identified in numerous tissues in a wide variety of organisms, including bacteria, yeast, nematodes, plants, drosophila and mammals

Probab=99.96  E-value=2.7e-29  Score=188.64  Aligned_cols=130  Identities=31%  Similarity=0.585  Sum_probs=106.4

Q ss_pred             eEEEEEECCCCeeecCCceeCCcc-cCCCCeEEEecCCCCcEEEEEEEcCCCCCCCCCCCceEEEEEEEccC--------
Q 030564           25 VKMTITYSSIKQQVYNGHEMFPSQ-VTQKPKVEVLGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIP--------   95 (175)
Q Consensus        25 ~~L~V~f~~~~~~v~~G~~l~~~~-~~~~P~i~~~~~~~~~~ytlvmvDpD~p~~~~~~~~~~lHwlv~ni~--------   95 (175)
                      ..|.|.|.++ ..+.+|+.+++.. ++..|+       .+++|+|+|+|||+|++.+++.++|||||++||+        
T Consensus         2 ~~L~v~f~~~-~~~~~G~~~sp~~~~~~~P~-------~~~~y~lim~D~D~P~~~~~~~~~~~Hwl~~ni~~~~~~~~~   73 (146)
T PF01161_consen    2 GKLPVKFTGN-KSVCPGNNVSPPLSWQNAPT-------GTKSYTLIMVDPDAPSRENPSFGPFLHWLVTNIPSTELPEGS   73 (146)
T ss_dssp             CEEEEEECTT-EECSTTEEEEGGGECSS-TC-------TTSEEEEEEEETTSSBTTSCTTTSEEEEEEEEEETSEE-TTS
T ss_pred             cCcCceeEcc-cccCCCCCCCcCcccccCCC-------CCcEEEEEEECCCCCccccCCCCcEEEEEEcCCCCccCCCCC
Confidence            4799999543 8999999999999 889988       4789999999999999999999999999999999        


Q ss_pred             -CC-cCCC-CCeeeeeecCCCC--CCCCCcEEEEEeeeCCCccccCCCCCCCCcCHHHHHHHhCCCCc-eEEEEEE
Q 030564           96 -GT-TDAS-FGKEVVNYEIPRP--NIGIHRFVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLP-VAAVFFN  165 (175)
Q Consensus        96 -~~-~~~~-~g~~~~~Y~~P~P--~~g~HRYvflL~~Q~~~~~~~~~~~~R~~F~~~~F~~~~~L~~P-va~~~f~  165 (175)
                       .. ...+ .|..+++|.||+|  |+|.|||+|+||+|+..+.+   ......+++++.+++++|+.+ +|++||+
T Consensus        74 ~~~~~~~~~~g~~~~~Y~~P~Pp~g~g~HrY~f~ly~q~~~~~l---~~~~~~~~~~~~~~~~~L~~~~l~~~y~r  146 (146)
T PF01161_consen   74 DGARQGINSSGQVIAPYLGPCPPKGSGPHRYVFLLYAQPSPLPL---SDGATKFDLREAFKGHGLGPASLAGNYFR  146 (146)
T ss_dssp             STCETSBGGTSEEEES--SB-SSTTSSCEEEEEEEEEESSSSTS---GBSSTHHTHHHHHHHTTEESEESEEEEEE
T ss_pred             CccEecccccCccccEEcCCcCcCcCCCceEEEEEEEcCCCCCC---CCCCCHHHHHHHHHcCCCCCceEEEEEEC
Confidence             10 0122 3677999999999  68899999999999996654   335556889999999999987 8999997

The various functions described for members of this family include lipid binding, neuronal development [], serine protease inhibition [], the control of the morphological switch between shoot growth and flower structures [], and the regulation of several signalling pathways such as the MAP kinase pathway [], and the NF-kappaB pathway []. The control of the latter two pathways involves the PEBP protein RKIP, which interacts with MEK and Raf-1 to inhibit the MAP kinase pathway, and with TAK1, NIK, IKKalpha and IKKbeta to inhibit the NF-kappaB pathway. Other PEBP-like proteins that show strong structural homology to PEBP include Escherichia coli YBHB and YBCL, the Rattus norvegicus (Rat) neuropeptide HCNP, and Antirrhinum majus (Garden snapdragon) protein centroradialis (CEN). Structures have been determined for several members of the PEBP-like family, all of which show extensive fold conservation. The structure consists of a large central beta-sheet flanked by a smaller beta-sheet on one side, and an alpha helix on the other. Sequence alignments show two conserved central regions, CR1 and CR2, that form a consensus signature for the PEBP family. These two regions form part of the ligand-binding site, which can accommodate various anionic groups. The N- and C-terminal regions are the least conserved, and may be involved in interactions with different protein partners. The N-terminal residues 2-12 form the natural cleavage peptide HCNP involved in neuronal development. The C-terminal region is deleted in plant and bacterial PEBP homologues, and may help control accessibility to the active site. ; PDB: 1BD9_A 1BEH_A 2QYQ_A 2L7W_A 3AXY_A 2IQX_C 2IQY_A 1KN3_A 1FUX_A 1B7A_A ....

>cd00457 PEBP PhosphatidylEthanolamine-Binding Protein (PEBP) domain

Probab=99.92  E-value=6.7e-25  Score=167.52  Aligned_cols=123  Identities=28%  Similarity=0.391  Sum_probs=98.9

Q ss_pred             eecC-CceeCC----cccCCCCeEEEecCC-CCcEEEEEEEcCCCCCCCCCCCceEEEEEEEccCCCcCC----------
Q 030564           37 QVYN-GHEMFP----SQVTQKPKVEVLGGD-MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDA----------  100 (175)
Q Consensus        37 ~v~~-G~~l~~----~~~~~~P~i~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwlv~ni~~~~~~----------  100 (175)
                      .+.. |+.|+.    .....+|.|+|++.. .+++|+|+|+|||+|.     .++|+||+++||+.+...          
T Consensus         6 ~~~~~g~~lp~~~~~~g~~~sP~l~w~~~p~~t~s~ali~~DpDap~-----~~~~~HWvv~nIp~~~~~~~~~~~~~~~   80 (159)
T cd00457           6 EVGPSGSVLPPEYSFEGVGRFPSLSWDGPPPDVKEYVLVMEDPDAPL-----GRPIVHGLVYGIPANKTSLSNDDFVVTD   80 (159)
T ss_pred             CcCCCCCccChhhccCCCCcCCceEecCCCCCCeEEEEEEECCCCCC-----CCCceEEEEeccCcccccccccccccCC
Confidence            3455 777777    666778999999886 5799999999999983     357999999999976311          


Q ss_pred             --CCCe----------eeeeecCCCC--CCCCCcEEEEEeeeCCCccccCCCCCCCCcCHHHHHHHhCCCCceEEEEEE
Q 030564          101 --SFGK----------EVVNYEIPRP--NIGIHRFVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFN  165 (175)
Q Consensus       101 --~~g~----------~~~~Y~~P~P--~~g~HRYvflL~~Q~~~~~~~~~~~~R~~F~~~~F~~~~~L~~Pva~~~f~  165 (175)
                        ..+.          ....|.||+|  |+|.|||+|+||+|+..+........+..|++.+|++.+.|+ ++|.++++
T Consensus        81 ~~~~~~~~~n~~g~~~~~~~Y~GP~PP~G~g~HrY~f~lyald~~~~~~~~~~~~~~~~~~~~~~~~vL~-~~a~~~~~  158 (159)
T cd00457          81 NGKGGLQGGFKYGKNRGGTVYIGPRPPLGHGPHRYFFQVYALDEPLDRSKLGDGRTKFEVARFAEGNVLG-AVGEWVGQ  158 (159)
T ss_pred             CCccceeccccccccCCCcCCcCCCCCCCCCCeeEEEEEEEecCccccccccCCCCHHHHHHHHHhCeee-EEEEEEEE
Confidence              1111          2349999999  678999999999999988764224689999999999999997 68999886

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). A number of biological roles for members of the PEBP family include serine protease inhibition, membrane biogenesis, regulation of flowering plant stem architecture, and Raf-1 kinase inhibition. Although their overall structures are similar, the members of the PEBP family bind very different substrates including phospholipids, opioids, and hydrophobic odorant molecules as well as having different oligomerization states (monomer/dimer/tetramer).

>cd00865 PEBP_bact_arch PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea

Probab=99.72  E-value=7.2e-17  Score=122.08  Aligned_cols=94  Identities=24%  Similarity=0.356  Sum_probs=74.4

Q ss_pred             CCCCeEEEecCC-CCcEEEEEEEcCCCCCCCCCCCceEEEEEEEccCCCc-CCCCC----------------eeeeeecC
Q 030564           50 TQKPKVEVLGGD-MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTT-DASFG----------------KEVVNYEI  111 (175)
Q Consensus        50 ~~~P~i~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwlv~ni~~~~-~~~~g----------------~~~~~Y~~  111 (175)
                      ..+|.|+|.+.. .+++|+|+|+|+|+|.     ..+|+||+++||+.+. .+..|                .....|.|
T Consensus        25 ~~SP~l~w~~~p~~t~s~al~m~D~Dap~-----~~~~~HW~~~nIp~~~~~i~~g~~~~~~~~~~~~g~n~~~~~~Y~g   99 (150)
T cd00865          25 NVSPPLSWSGVPAGTKSLALIVEDPDAPT-----GGGFVHWVVWNIPADTTELPEGASRGALPAGAVQGRNDFGEAGYGG   99 (150)
T ss_pred             CcCCCeEEcCCCCCCeEEEEEEEcCCCCC-----CCCEEEEEEeccCcccccccCCcccccCCCCCeEeecCCCCCeecC
Confidence            578999999885 5799999999999983     3679999999999862 22211                25789999


Q ss_pred             CCC-CCCCCcEEEEEeeeCCCccccCCCCCCCCcCHHHHHHHhC
Q 030564          112 PRP-NIGIHRFVFLLFKQKRRQTEMSVPASRDRFNTRKFAEEND  154 (175)
Q Consensus       112 P~P-~~g~HRYvflL~~Q~~~~~~~~~~~~R~~F~~~~F~~~~~  154 (175)
                      |+| ..+.|||+|.||+++..+..      ...+...+++++..
T Consensus       100 P~Pp~~~~HrY~f~vyAld~~l~~------~~~~~~~~l~~ai~  137 (150)
T cd00865         100 PCPPDGGPHRYVFTVYALDVPLLL------PPGATRAELLFAMK  137 (150)
T ss_pred             CCCcCCCceEEEEEEEEeCCccCC------CCCCCHHHHHHHHh
Confidence            999 55899999999999988765      25677777776643

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in bacterial and archaea. Members here include Escherichia coli YBHB and YBCL which are thought to regulate protein phosphorylation as well as Sulfolobus solfataricus SsCEI which inhibits serine proteases alpha-chymotrypsin and elastase. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer). In a few of the bacterial members present here the dimerization interface is proposed to form the ligand binding site, unlike in other PEBP members.

>PRK10257 putative kinase inhibitor protein; Provisional

Probab=99.65  E-value=1.2e-15  Score=116.25  Aligned_cols=80  Identities=24%  Similarity=0.383  Sum_probs=62.4

Q ss_pred             CCCeEEEecCC-CCcEEEEEEEcCCCCCCCCCCCceEEEEEEEccCCCcC-C----C-------CCe-------eeeeec
Q 030564           51 QKPKVEVLGGD-MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTD-A----S-------FGK-------EVVNYE  110 (175)
Q Consensus        51 ~~P~i~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwlv~ni~~~~~-~----~-------~g~-------~~~~Y~  110 (175)
                      .+|.|+|.+.. .+++|+|+|.|||+|..     ..|+||++.||+++.. +    .       .|.       ....|.
T Consensus        30 ~SP~L~w~~~P~~t~s~ali~~DpDap~~-----~~~~HWvv~nIP~~~~~l~eg~~~~~~~~p~g~~~g~n~~g~~gY~  104 (158)
T PRK10257         30 ISPHLAWDDVPAGTKSFVVTCYDPDAPTG-----SGWWHWVVVNLPADTRVLPQGFGSGLVALPDGVLQTRTDFGKAGYG  104 (158)
T ss_pred             CCceEEEcCCCCCceEEEEEEECCCCCCC-----CcEEEEEEEcCCCCcccccCCCCcccccCCCCceeccccCCCccCc
Confidence            48999999875 46999999999999864     3699999999997521 1    1       111       246899


Q ss_pred             CCCCCCC-CCcEEEEEeeeC-CCcccc
Q 030564          111 IPRPNIG-IHRFVFLLFKQK-RRQTEM  135 (175)
Q Consensus       111 ~P~P~~g-~HRYvflL~~Q~-~~~~~~  135 (175)
                      ||+|+.| .|||+|.||+++ ..+.+.
T Consensus       105 GP~PP~g~~HrY~f~vyALd~~~L~l~  131 (158)
T PRK10257        105 GAAPPKGETHRYIFTVHALDVERIDVD  131 (158)
T ss_pred             CCCCccCCCceEEEEEEEecCcccCCC
Confidence            9999544 799999999999 467764

>PRK09818 putative kinase inhibitor; Provisional

Probab=99.64  E-value=1.6e-15  Score=117.92  Aligned_cols=95  Identities=22%  Similarity=0.382  Sum_probs=71.1

Q ss_pred             eeecCCceeCCccc---------CCCCeEEEecCC-CCcEEEEEEEcCCCCCCCCCCCceEEEEEEEccCCCcC-CC---
Q 030564           36 QQVYNGHEMFPSQV---------TQKPKVEVLGGD-MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTD-AS---  101 (175)
Q Consensus        36 ~~v~~G~~l~~~~~---------~~~P~i~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwlv~ni~~~~~-~~---  101 (175)
                      ..+..|..|+.+.+         ..+|.++|.+.. .+++|+|+|.|||+|..     ..|+||+++||+.+.. +.   
T Consensus        27 ~~f~~G~~ip~~~~~~~~~~~G~n~SP~L~W~~~P~gtks~aLi~~DpDaP~g-----~~~~HWvv~nIP~~~~~l~eg~  101 (183)
T PRK09818         27 NEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGAPEGTKSFAVTVYDPDAPTG-----SGWWHWTVANIPATVTYLPADA  101 (183)
T ss_pred             cCccCcCCCCHHHcccccCCCCCCcceeEEEccCCCCcEEEEEEEECCCCCCC-----CcEEEEEEEcCCCCccccCCCC
Confidence            34567777775432         258999999875 46999999999999864     3699999999986521 10   


Q ss_pred             ---------CC-------eeeeeecCCCC--CCCCCcEEEEEeeeC-CCcccc
Q 030564          102 ---------FG-------KEVVNYEIPRP--NIGIHRFVFLLFKQK-RRQTEM  135 (175)
Q Consensus       102 ---------~g-------~~~~~Y~~P~P--~~g~HRYvflL~~Q~-~~~~~~  135 (175)
                               .|       -....|.||+|  |.|.|||+|.||+.+ +.+.+.
T Consensus       102 ~~~~~~~~~~g~~~g~N~~g~~gY~GP~PP~G~g~HrY~F~vyALd~~~l~l~  154 (183)
T PRK09818        102 GRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTDKIPVD  154 (183)
T ss_pred             cccccccCCCCCEEeecCCCCCceECCCCccCCCCEEEEEEEEEecCcccCCC
Confidence                     11       12458999999  677999999999998 456654

>TIGR00481 Raf kinase inhibitor-like protein, YbhB/YbcL family

Probab=99.63  E-value=3.8e-15  Score=111.65  Aligned_cols=94  Identities=26%  Similarity=0.389  Sum_probs=71.4

Q ss_pred             CCCCeEEEecCC-CCcEEEEEEEcCCCCCCCCCCCceEEEEEEEccCCCc-C----CC-------CC--------eeeee
Q 030564           50 TQKPKVEVLGGD-MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTT-D----AS-------FG--------KEVVN  108 (175)
Q Consensus        50 ~~~P~i~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwlv~ni~~~~-~----~~-------~g--------~~~~~  108 (175)
                      ..+|.|+|.+.. .+++|+|+|.|||+|...     .|+||++.||+.+. .    +.       .|        -....
T Consensus        13 n~SP~l~w~~~P~~t~s~al~~~D~Dap~~~-----~~~HWv~~nIp~~~~~l~e~~~~~~~~~~~g~~~~g~n~~g~~~   87 (141)
T TIGR00481        13 NISPPLSWDGVPEGAKSLALTCIDPDAPTGC-----GWWHWVVVNIPADTTVLPENASSDDKRLPQGVPLQGRNDFGKSG   87 (141)
T ss_pred             CCCcEEEEcCCCCCceEEEEEEECCCCCCCC-----CeEEEEEecCCCCcccccCCccccccccCCcceeEeeccCCCcc
Confidence            358999999874 468999999999998754     39999999999742 1    11       12        12568


Q ss_pred             ecCCCCCCCCCcEEEEEeeeCCC-ccccCCCCCCCCcCHHHHHHHhC
Q 030564          109 YEIPRPNIGIHRFVFLLFKQKRR-QTEMSVPASRDRFNTRKFAEEND  154 (175)
Q Consensus       109 Y~~P~P~~g~HRYvflL~~Q~~~-~~~~~~~~~R~~F~~~~F~~~~~  154 (175)
                      |.||+|+.|.|||+|.||+.+.. +.+.      .++...+++++..
T Consensus        88 Y~GP~PP~g~HrY~f~vyALd~~~l~l~------~~~~~~~l~~ai~  128 (141)
T TIGR00481        88 YIGPCPPKGDHRYLFTVYALDTEKLDLD------PGFSLADLGDAME  128 (141)
T ss_pred             EeCCCCcCCCEEEEEEEEEecCCCCCCC------CCCCHHHHHHHHh
Confidence            99999966679999999999976 7653      2567777766543

>COG1881 Phospholipid-binding protein [General function prediction only]

Probab=99.62  E-value=1.8e-15  Score=116.73  Aligned_cols=112  Identities=22%  Similarity=0.349  Sum_probs=78.9

Q ss_pred             eeecCCceeCCccc----CCCCeEEEecCC-CCcEEEEEEEcCCCCCCCCCCCceEEEEEEEccCCCc-C-----CC---
Q 030564           36 QQVYNGHEMFPSQV----TQKPKVEVLGGD-MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTT-D-----AS---  101 (175)
Q Consensus        36 ~~v~~G~~l~~~~~----~~~P~i~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwlv~ni~~~~-~-----~~---  101 (175)
                      ..+..|+.++...+    ...|.++|++.. .+++|.|+|.|||||+     ...|+||+++||+... .     ..   
T Consensus        28 ~~f~~g~~ip~~~t~~g~~~sPpl~ws~~P~~tkS~AL~v~DpDAP~-----g~~~~HWvv~nIp~~~~~~~~~~~~~~~  102 (174)
T COG1881          28 NAFADGAPIPDEYTCGGPNISPPLSWSGVPEGTKSFALTVDDPDAPT-----GGGWVHWVVANIPADVTELPEGSGPKSK  102 (174)
T ss_pred             hhhhCCCccchhhhcCCCCcCCceeecCCCCCCeeEEEEEECCCCCC-----CCcEEEEEEEccCCcccccccccccccc
Confidence            46677888776653    578999999874 5799999999999997     3579999999999731 1     10   


Q ss_pred             C-------CeeeeeecCCCCCCCC-CcEEEEEeeeCCCccccCCCCCCCCcCHH---HHHHHhCCCC
Q 030564          102 F-------GKEVVNYEIPRPNIGI-HRFVFLLFKQKRRQTEMSVPASRDRFNTR---KFAEENDLGL  157 (175)
Q Consensus       102 ~-------g~~~~~Y~~P~P~~g~-HRYvflL~~Q~~~~~~~~~~~~R~~F~~~---~F~~~~~L~~  157 (175)
                      .       +-.-..|.||+|+.|. |||.|.||+++......  +   .+|.-.   +-++.|.|..
T Consensus       103 ~~~~qg~Nd~g~~~Y~Gp~PP~g~~HrY~f~vyALd~~~~~~--~---~g~~~~~~~~~~~~hil~~  164 (174)
T COG1881         103 IGIVQGINDFGSRGYGGPCPPKGHGHRYYFTVYALDVELLLL--P---AGASGAELGKAMEGHILAQ  164 (174)
T ss_pred             cceEEeeccccccCcccCCCCCCCCeEEEEEEEEcccccccC--C---CCCCHHHHHHHHHHHHHHH
Confidence            0       1233459999995555 99999999999865432  1   344433   3345555553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	175
1qou_A	181	Cen (Centroradialis) Protein From Antirrhinum Lengt		5e-76
1wko_A	180	Terminal Flower 1 (Tfl1) From Arabidopsis Thaliana		2e-71
3axy_A	170	Structure Of Florigen Activation Complex Consisting		1e-53
1wkp_A	171	Flowering Locus T (Ft) From Arabidopsis Thaliana Le		3e-51
2jyz_A	179	Cg7054 Solution Structure Length = 179		7e-21
1kn3_A	183	Murine Pebp-2 (Phosphatidylethanolamine-Binding Pro		4e-12
2iqx_A	187	Rat Phosphatidylethanolamine-Binding Protein Contai		5e-12
2iqy_A	190	Rat Phosphatidylethanolamine-Binding Protein Length		6e-12
1bd9_A	187	Human Phosphatidylethanolamine Binding Protein Leng		2e-11
1b7a_A	186	Structure Of The Phosphatidylethanolamine-Binding P		5e-11
1a44_A	185	Phosphatidylethanolamine Binding Protein From Calf		6e-11
1wpx_B	220	Crystal Structure Of Carboxypeptidase Y Inhibitor C		6e-08

>pdb|1QOU|A Chain A, Cen (Centroradialis) Protein From Antirrhinum Length = 181

Iteration: 1
 Score =  279 bits (714), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 133/175 (76%), Positives = 151/175 (86%), Gaps = 4/175 (2%)
Query: 5   SDALVLGRVVGEVIDYFTPSVKMTITYSSIK--QQVYNGHEMFPSQVTQKPKVEVLGGDM 62
           SD LV+GRV+G+V+D+FT +VKM++ Y+S    + VYNGHE+FPS VT  P+VEV GGDM
Sbjct: 7   SDPLVIGRVIGDVVDHFTSTVKMSVIYNSNNSIKHVYNGHELFPSAVTSTPRVEVHGGDM 66
Query: 63  RSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFV 122
           RSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTD+SFGKEVV+YE+PRPNIGIHRFV
Sbjct: 67  RSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSSFGKEVVSYEMPRPNIGIHRFV 126
Query: 123 FLLFKQKRRQTEMSVP--ASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           FLLFKQK+R   M  P    RD FNTRKF +EN+LGLPVAAVFFN QRETAARRR
Sbjct: 127 FLLFKQKKRGQAMLSPPVVCRDGFNTRKFTQENELGLPVAAVFFNCQRETAARRR 181

>pdb|1WKO|A Chain A, Terminal Flower 1 (Tfl1) From Arabidopsis Thaliana Length = 180

Iteration: 1
 Score =  264 bits (674), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 121/174 (69%), Positives = 152/174 (87%), Gaps = 2/174 (1%)
Query: 2   AKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGD 61
            ++ + L++GRVVG+V+D+FTP+ KM ++Y+  K+QV NGHE+FPS V+ KP+VE+ GGD
Sbjct: 9   TRVIEPLIMGRVVGDVLDFFTPTTKMNVSYN--KKQVSNGHELFPSSVSSKPRVEIHGGD 66
Query: 62  MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRF 121
           +RSFFTL+M DPDVPGPSDP+L+EHLHWIVT+IPGTTDA+FGKEVV+YE+PRP+IGIHRF
Sbjct: 67  LRSFFTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRF 126
Query: 122 VFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           VF+LF+QK+R+       SRD FNTRKFA E DLGLPVAAVFFNAQRETAAR+R
Sbjct: 127 VFVLFRQKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 180

>pdb|3AXY|A Chain A, Structure Of Florigen Activation Complex Consisting Of Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd Homolog Osfd1 Length = 170

Iteration: 1
 Score =  204 bits (520), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 100/164 (60%), Positives = 125/164 (76%), Gaps = 3/164 (1%)
Query: 6   DALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSF 65
           D LV+GRVVG+V+D F  S  + +TY S  + V NG E+ PS VT +P+VEV G DMR+F
Sbjct: 9   DPLVVGRVVGDVLDAFVRSTNLKVTYGS--KTVSNGLELKPSMVTHQPRVEVGGNDMRTF 66
Query: 66  FTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLL 125
           +TL+M DPD P PSDP LRE+LHW+VTDIPGTT ASFG+EV++YE PRP +GIHR VF+L
Sbjct: 67  YTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMSYESPRPTMGIHRLVFVL 126
Query: 126 FKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRE 169
           F+Q  RQT +  P  R  FNT+ FAE  +LG PVAAV+FN+QRE
Sbjct: 127 FQQLGRQT-VYAPGWRQNFNTKDFAELYNLGSPVAAVYFNSQRE 169

>pdb|1WKP|A Chain A, Flowering Locus T (Ft) From Arabidopsis Thaliana Length = 171

Iteration: 1
 Score =  197 bits (501), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 93/168 (55%), Positives = 126/168 (75%), Gaps = 3/168 (1%)
Query: 3   KMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDM 62
            + D L++ RVVG+V+D F  S+ + +TY   +++V NG  + PSQV  KP+VE+ G D+
Sbjct: 7   NIRDPLIVSRVVGDVLDPFNRSITLKVTYG--QREVTNGLNLRPSQVQNKPRVEIGGEDL 64
Query: 63  RSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFV 122
           R+F+TL+M DPDVP PS+P+LRE+LHW+VTDIP TT  +FG E+V+YE P P  GIHR V
Sbjct: 65  RNFYTLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVSYENPSPTAGIHRVV 124
Query: 123 FLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRET 170
           F+LF+Q  RQT +  P  R  FNTR+FAE  +LGLPVAAVF+N+QRE+
Sbjct: 125 FILFRQLGRQT-VYAPGWRQNFNTREFAEIYNLGLPVAAVFYNSQRES 171

>pdb|2JYZ|A Chain A, Cg7054 Solution Structure Length = 179

Iteration: 1
 Score = 96.7 bits (239), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 93/166 (56%), Gaps = 11/166 (6%)
Query: 13  VVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRS-FFTLIMT 71
           +V +V+D   P+  + + Y     +V  G+E+ P+QV  +P V   G + +S   TL+M 
Sbjct: 4   IVPDVLD-AVPAGTIKVIYGD-DLEVKQGNELTPTQVKDQPIVSWSGLEGKSNLLTLLMV 61
Query: 72  DPDVPGPSDPYLREHLHWIVTDIPGTT-DASFGKEVVNY--EIPRPNIGIHRFVFLLFKQ 128
           DPD P   DP  RE LHW V +IPG+  + S G  + +Y    P  + G+HR++FLL++Q
Sbjct: 62  DPDAPTRQDPKYREILHWSVVNIPGSNENPSGGHSLADYVGSGPPKDTGLHRYIFLLYRQ 121
Query: 129 KRRQTEMSVPASRDR-----FNTRKFAEENDLGLPVAAVFFNAQRE 169
           + +  E    ++  R     FN R FA ++ LG P+AA ++ AQ +
Sbjct: 122 ENKIEETPTISNTTRTGRLNFNARDFAAKHGLGEPIAANYYQAQYD 167

>pdb|1KN3|A Chain A, Murine Pebp-2 (Phosphatidylethanolamine-Binding Protein-2) Length = 183

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 23  PSVKMTITYSSIKQQVYNGHEMFPSQVTQKP-KVEVLGGDMRSFFTLIMTDPDVPGPSDP 81
           P   + +TY+  + +   G  + P+QV  +P  +   G D    +TLI+TDPD P    P
Sbjct: 17  PQHLLRVTYTEAEVEEL-GQVLTPTQVKHRPGSISWDGLDPGKLYTLILTDPDAPSRKKP 75
Query: 82  YLREHLHWIVTDIPGTTDASFGKEVVNY--EIPRPNIGIHRFVFLLFKQKR--RQTEMSV 137
             RE  H++V ++ G  D S G  + +Y    P    G+HR+V+L+++Q +  R  E  +
Sbjct: 76  VYREWHHFLVVNMKG-NDISSGNVLSDYVGSGPPKGTGLHRYVWLVYQQDKPLRCDEPIL 134
Query: 138 PA----SRDRFNTRKFAEENDLGLPVAAVFFNAQRET 170
                  R +F T  F ++  LG PVA   + A+ ++
Sbjct: 135 TNRSGDHRGKFKTAAFRKKYHLGAPVAGTCYQAEWDS 171

>pdb|2IQX|A Chain A, Rat Phosphatidylethanolamine-Binding Protein Containing The S153e Mutation In The Complex With O-Phosphorylethanolamine Length = 187

Iteration: 1
 Score = 67.0 bits (162), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 75/140 (53%), Gaps = 10/140 (7%)
Query: 41  GHEMFPSQVTQKPK-VEVLGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTD 99
           G  + P+QV  +P  +   G D    +TL++TDPD P   DP  RE  H++V ++ G  D
Sbjct: 38  GKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKG-ND 96
Query: 100 ASFGKEVVNY--EIPRPNIGIHRFVFLLFKQKR----RQTEMSVPA--SRDRFNTRKFAE 151
            S G  +  Y    P  + G+HR+V+L+++Q++     +  +S  +  +R +F   +F +
Sbjct: 97  ISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKSGDNRGKFKVEEFRK 156
Query: 152 ENDLGLPVAAVFFNAQRETA 171
           +  LG PVA   F A+ + +
Sbjct: 157 KYHLGAPVAGTCFQAEWDDS 176

>pdb|2IQY|A Chain A, Rat Phosphatidylethanolamine-Binding Protein Length = 190

Iteration: 1
 Score = 67.0 bits (162), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 74/140 (52%), Gaps = 10/140 (7%)
Query: 41  GHEMFPSQVTQKPK-VEVLGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTD 99
           G  + P+QV  +P  +   G D    +TL++TDPD P   DP  RE  H++V ++ G  D
Sbjct: 41  GKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKG-ND 99
Query: 100 ASFGKEVVNY--EIPRPNIGIHRFVFLLFKQKR----RQTEMSVPA--SRDRFNTRKFAE 151
            S G  +  Y    P  + G+HR+V+L+++Q++     +  +S  +  +R +F    F +
Sbjct: 100 ISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKSGDNRGKFKVESFRK 159
Query: 152 ENDLGLPVAAVFFNAQRETA 171
           +  LG PVA   F A+ + +
Sbjct: 160 KYHLGAPVAGTCFQAEWDDS 179

>pdb|1BD9|A Chain A, Human Phosphatidylethanolamine Binding Protein Length = 187

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 10/138 (7%)
Query: 41  GHEMFPSQVTQKP-KVEVLGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTD 99
           G  + P+QV  +P  +   G D    +TL++TDPD P   DP  RE  H++V ++ G  D
Sbjct: 38  GKVLTPTQVKNRPTSISWDGLDSGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKG-ND 96
Query: 100 ASFGKEVVNY--EIPRPNIGIHRFVFLLFKQKR-RQTEMSVPASRD-----RFNTRKFAE 151
            S G  + +Y    P    G+HR+V+L+++Q R  + +  + ++R      +F    F +
Sbjct: 97  ISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQDRPLKCDEPILSNRSGDHRGKFKVASFRK 156
Query: 152 ENDLGLPVAAVFFNAQRE 169
           + +L  PVA   + A+ +
Sbjct: 157 KYELRAPVAGTCYQAEWD 174

>pdb|1B7A|A Chain A, Structure Of The Phosphatidylethanolamine-Binding Protein From Bovine Brain Length = 186

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 10/138 (7%)
Query: 41  GHEMFPSQVTQKP-KVEVLGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTD 99
           G  + P+QV  +P  +   G D    +TL++TDPD P   DP  RE  H++V ++ G  +
Sbjct: 37  GKVLTPTQVKNRPTSITWDGLDPGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKG-NN 95
Query: 100 ASFGKEVVNY--EIPRPNIGIHRFVFLLFKQ----KRRQTEMSVPAS--RDRFNTRKFAE 151
            S G  + +Y    P    G+HR+V+L+++Q    K  +  +S  +   R +F    F +
Sbjct: 96  ISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQEGPLKCDEPILSNRSGDHRGKFKVASFRK 155
Query: 152 ENDLGLPVAAVFFNAQRE 169
           + +LG PVA   + A+ +
Sbjct: 156 KYELGAPVAGTCYQAEWD 173

>pdb|1A44|A Chain A, Phosphatidylethanolamine Binding Protein From Calf Brain Length = 185

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 10/138 (7%)
Query: 41  GHEMFPSQVTQKP-KVEVLGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTD 99
           G  + P+QV  +P  +   G D    +TL++TDPD P   DP  RE  H++V ++ G  +
Sbjct: 37  GKVLTPTQVKNRPTSITWDGLDPGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKG-NN 95
Query: 100 ASFGKEVVNY--EIPRPNIGIHRFVFLLFKQ----KRRQTEMSVPAS--RDRFNTRKFAE 151
            S G  + +Y    P    G+HR+V+L+++Q    K  +  +S  +   R +F    F +
Sbjct: 96  ISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQEGPLKCDEPILSNRSGDHRGKFKVASFRK 155
Query: 152 ENDLGLPVAAVFFNAQRE 169
           + +LG PVA   + A+ +
Sbjct: 156 KYELGAPVAGTCYQAEWD 173

>pdb|1WPX|B Chain B, Crystal Structure Of Carboxypeptidase Y Inhibitor Complexed With The Cognate Proteinase Length = 220

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 29/131 (22%)
Query: 65  FFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDAS---------FGKE--------VV 107
            FTL+MTDPD P  +D    E  H +  D+    +A+         F  E        ++
Sbjct: 89  LFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSNTLI 148
Query: 108 NYEIPRP--NIGIHRFVFLLFKQKRRQTEMSVPASRDRFN---------TRKFAEENDLG 156
            Y  P P    G HR+VFLL+KQ +          +DR N           K+A+EN+L 
Sbjct: 149 EYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFSKIKDRPNWGYGTPATGVGKWAKENNLQ 208
Query: 157 LPVAAVFFNAQ 167
           L VA+ FF A+
Sbjct: 209 L-VASNFFYAE 218

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	175
1wko_A	180	Terminal flower 1 protein; CIS-peptide, PEBP, sign	3e-71
3axy_A	170	Protein heading DATE 3A; phosphatidylethanolamine-	1e-67
2jyz_A	179	CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular mo	9e-54
1wpx_B	220	Carboxypeptidase Y inhibitor; carboxypeptidase inh	4e-53
2iqy_A	190	Phosphatidylethanolamine-binding protein 1; alpha-	3e-51
2gzq_A	200	Phosphatidylethanolamine-binding protein; structur	3e-51
3n08_A	153	Putative phosphatidylethanolamine-binding protein;	5e-07

>1wko_A Terminal flower 1 protein; CIS-peptide, PEBP, signaling protein; 1.80A {Arabidopsis thaliana} PDB: 1qou_A Length = 180

 Score =  212 bits (540), Expect = 3e-71
 Identities = 121/176 (68%), Positives = 150/176 (85%), Gaps = 3/176 (1%)

Query: 1   MAKMS-DALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLG 59
           M     + L++GRVVG+V+D+FTP+ KM ++Y+   +QV NGHE+FPS V+ KP+VE+ G
Sbjct: 7   MGTRVIEPLIMGRVVGDVLDFFTPTTKMNVSYNK--KQVSNGHELFPSSVSSKPRVEIHG 64

Query: 60  GDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIH 119
           GD+RSFFTL+M DPDVPGPSDP+L+EHLHWIVT+IPGTTDA+FGKEVV+YE+PRP+IGIH
Sbjct: 65  GDLRSFFTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIH 124

Query: 120 RFVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRETAARRR 175
           RFVF+LF+QK+R+       SRD FNTRKFA E DLGLPVAAVFFNAQRETAAR+R
Sbjct: 125 RFVFVLFRQKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 180

>3axy_A Protein heading DATE 3A; phosphatidylethanolamine-binding protein, 14-3-3 protein, BZ protein, floral induction; HET: SEP; 2.40A {Oryza sativa japonica group} PDB: 1wkp_A Length = 170

 Score =  202 bits (515), Expect = 1e-67
 Identities = 100/167 (59%), Positives = 126/167 (75%), Gaps = 3/167 (1%)

Query: 3   KMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDM 62
           +  D LV+GRVVG+V+D F  S  + +TY S  + V NG E+ PS VT +P+VEV G DM
Sbjct: 6   RDRDPLVVGRVVGDVLDAFVRSTNLKVTYGS--KTVSNGLELKPSMVTHQPRVEVGGNDM 63

Query: 63  RSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFV 122
           R+F+TL+M DPD P PSDP LRE+LHW+VTDIPGTT ASFG+EV++YE PRP +GIHR V
Sbjct: 64  RTFYTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMSYESPRPTMGIHRLV 123

Query: 123 FLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRE 169
           F+LF+Q  RQT +  P  R  FNT+ FAE  +LG PVAAV+FN+QRE
Sbjct: 124 FVLFQQLGRQT-VYAPGWRQNFNTKDFAELYNLGSPVAAVYFNSQRE 169

>2jyz_A CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular modeling, chemical shift variations, titration, unknown function; NMR {Drosophila melanogaster} Length = 179

 Score =  167 bits (425), Expect = 9e-54
 Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)

Query: 10  LGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMR-SFFTL 68
           +  +V +V+D   P+  + + Y     +V  G+E+ P+QV  +P V   G + + +  TL
Sbjct: 1   MDDIVPDVLDAV-PAGTIKVIYGD-DLEVKQGNELTPTQVKDQPIVSWSGLEGKSNLLTL 58

Query: 69  IMTDPDVPGPSDPYLREHLHWIVTDIPGTTD-ASFGKEVVNYEIPR--PNIGIHRFVFLL 125
           +M DPD P   DP  RE LHW V +IPG+ +  S G  + +Y       + G+HR++FLL
Sbjct: 59  LMVDPDAPTRQDPKYREILHWSVVNIPGSNENPSGGHSLADYVGSGPPKDTGLHRYIFLL 118

Query: 126 FKQKRRQTEM-----SVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRE 169
           ++Q+ +  E      +    R  FN R FA ++ LG P+AA ++ AQ +
Sbjct: 119 YRQENKIEETPTISNTTRTGRLNFNARDFAAKHGLGEPIAANYYQAQYD 167

>1wpx_B Carboxypeptidase Y inhibitor; carboxypeptidase inhibitor, serine proteinase inhibitor, Pro inhibitor complex; HET: NAG NDG; 2.70A {Saccharomyces cerevisiae} SCOP: b.17.1.1 Length = 220

 Score =  167 bits (424), Expect = 4e-53
 Identities = 49/209 (23%), Positives = 76/209 (36%), Gaps = 47/209 (22%)

Query: 6   DALVLGRVVGEVID--YFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMR 63
           D+     ++ +VI    F PS  + + YSS    V  G+ +   +   KP+ +       
Sbjct: 14  DSYKKHGILEDVIHDTSFQPSGILAVEYSS-SAPVAMGNTLPTEKARSKPQFQFTFNKQM 72

Query: 64  ---------------SFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDA-------- 100
                            FTL+MTDPD P  +D    E  H +  D+    +A        
Sbjct: 73  QKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGAT 132

Query: 101 ---------SFGKEVVNYEIPRP--NIGIHRFVFLLFKQKRRQTEMSVPA---------S 140
                         ++ Y  P P    G HR+VFLL+KQ +                   
Sbjct: 133 EFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFSKIKDRPNWGYG 192

Query: 141 RDRFNTRKFAEENDLGLPVAAVFFNAQRE 169
                  K+A+EN+L   VA+ FF A+ +
Sbjct: 193 TPATGVGKWAKENNLQ-LVASNFFYAETK 220

>2iqy_A Phosphatidylethanolamine-binding protein 1; alpha-beta, hydrolase inhibitor; 1.40A {Rattus norvegicus} PDB: 2iqx_A 1b7a_A* 1a44_A 1beh_A 1bd9_A 2l7w_A 2qyq_A* 1kn3_A Length = 190

 Score =  162 bits (410), Expect = 3e-51
 Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 12/168 (7%)

Query: 11  GRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPK-VEVLGGDMRSFFTLI 69
           G +  + +D   P   + + Y         G  + P+QV  +P  +   G D    +TL+
Sbjct: 13  GPLSLQEVD-EPPQHALRVDYGG-VTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLV 70

Query: 70  MTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNY--EIPRPNIGIHRFVFLLFK 127
           +TDPD P   DP  RE  H++V ++ G  D S G  +  Y    P  + G+HR+V+L+++
Sbjct: 71  LTDPDAPSRKDPKFREWHHFLVVNMKGN-DISSGTVLSEYVGSGPPKDTGLHRYVWLVYE 129

Query: 128 QKRRQT------EMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQRE 169
           Q++               +R +F    F ++  LG PVA   F A+ +
Sbjct: 130 QEQPLNCDEPILSNKSGDNRGKFKVESFRKKYHLGAPVAGTCFQAEWD 177

>2gzq_A Phosphatidylethanolamine-binding protein; structural genomics, PSI, protein structure initiative; HET: MSE; 1.30A {Plasmodium vivax} PDB: 2r77_A Length = 200

 Score =  162 bits (410), Expect = 3e-51
 Identities = 38/187 (20%), Positives = 69/187 (36%), Gaps = 25/187 (13%)

Query: 6   DALVLGRVVGEVI--DYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGG--D 61
           + L   +++  V   +    +V M I++ S K+ V +G+ +  +     P+         
Sbjct: 16  EELKREKIIPHVFPDENVDLTVDMYISFKSGKE-VNHGNILDLAGTGSVPRNIKFSEEPP 74

Query: 62  MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTT----DASFGKEVVNYEIPRP--N 115
               + L M DPD P    P  R+++HW V+ I               ++ Y  P     
Sbjct: 75  EDYCYILFMIDPDFPSRRRPDGRDYVHWAVSGIKSKELVKGTDKNCITLLPYVGPSIKKG 134

Query: 116 IGIHRFVFLLFKQKRRQT---------EMSVPASRDRFNTRKFA----EENDLGLPVAAV 162
            G+HR  F+L   K                   +R +FN  + A    + ND+   V   
Sbjct: 135 TGLHRISFILSLVKEENKGNVTGVPLYRGEHYITRVKFNNCQSAYNVIQMNDMK-IVGFN 193

Query: 163 FFNAQRE 169
           +   +R+
Sbjct: 194 WCQMRRK 200

>3n08_A Putative phosphatidylethanolamine-binding protein; eukarytic homolog RAF kinase inhibitor protein (RKIP). csgid structural genomics; 1.25A {Chlamydia trachomatis} Length = 153

 Score = 46.2 bits (110), Expect = 5e-07
 Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 17/75 (22%)

Query: 66  FTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDA--------------SFGKEVVNYEI 111
             LI+ DPDVP          +HWIV ++                    + G+  + Y  
Sbjct: 44  LVLIVEDPDVPPSVRE-DGLWIHWIVYNLSPVVSNLAEGAQIFAVQGLNTAGE--IGYCP 100

Query: 112 PRPNIGIHRFVFLLF 126
           P P    HR+ F  +
Sbjct: 101 PCPPDAKHRYYFYAY 115

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	175
1wko_A	180	Terminal flower 1 protein; CIS-peptide, PEBP, sign	100.0
3axy_A	170	Protein heading DATE 3A; phosphatidylethanolamine-	100.0
2iqy_A	190	Phosphatidylethanolamine-binding protein 1; alpha-	100.0
2jyz_A	179	CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular mo	100.0
2gzq_A	200	Phosphatidylethanolamine-binding protein; structur	100.0
1wpx_B	220	Carboxypeptidase Y inhibitor; carboxypeptidase inh	100.0
1fux_A	166	Hypothetical 19.5 kDa protein in EMRE-RUS intergen	99.88
3n08_A	153	Putative phosphatidylethanolamine-binding protein;	99.86
1fjj_A	159	Hypothetical 17.1 kDa protein in MODC-BIOA interge	99.83
2evv_A	207	Hypothetical protein HP0218; alpha-beta structure,	99.79

>1wko_A Terminal flower 1 protein; CIS-peptide, PEBP, signaling protein; 1.80A {Arabidopsis thaliana} PDB: 1qou_A

Probab=100.00  E-value=1.9e-54  Score=335.40  Aligned_cols=173  Identities=69%  Similarity=1.215  Sum_probs=156.7

Q ss_pred             CcccchhhhcCCcccccCCCCCCCeEEEEEECCCCeeecCCceeCCcccCCCCeEEEecCCCCcEEEEEEEcCCCCCCCC
Q 030564            1 MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSFFTLIMTDPDVPGPSD   80 (175)
Q Consensus         1 ~~~~~~~l~~~~iipdvl~~f~P~~~L~V~f~~~~~~v~~G~~l~~~~~~~~P~i~~~~~~~~~~ytlvmvDpD~p~~~~   80 (175)
                      |+++.++|++++||||+++.|.|++.|+|.|++  ..|.+|+.|+++++..+|+|+|.+.+.+.+|||+|+|||+|++++
T Consensus         8 ~~~~~~~l~~~~vipdvl~~f~P~~~l~V~y~s--~~v~~G~~l~~~~~~~~P~l~~~~~~~~~~ytlvm~DPDaP~~~~   85 (180)
T 1wko_A            8 GTRVIEPLIMGRVVGDVLDFFTPTTKMNVSYNK--KQVSNGHELFPSSVSSKPRVEIHGGDLRSFFTLVMIDPDVPGPSD   85 (180)
T ss_dssp             --CTTHHHHHTTHHHHTBCCCCCCSEEEEEETT--EECCTTCBCCGGGGSSCCEEEEESSCTTCEEEEEEEECSCSBTTB
T ss_pred             HHHHHHHHHhCCCCCCccCCcCCCeeEEEEECC--eEcCCCCCcCHHHhCcCCeEEEecCCCCceEEEEEeCCCCCCCcc
Confidence            789999999999999999999999999999988  899999999999999999999999876679999999999999999


Q ss_pred             CCCceEEEEEEEccCCCcCCCCCeeeeeecCCCCCCCCCcEEEEEeeeCCCccccCCCCCCCCcCHHHHHHHhCCCCceE
Q 030564           81 PYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVA  160 (175)
Q Consensus        81 ~~~~~~lHwlv~ni~~~~~~~~g~~~~~Y~~P~P~~g~HRYvflL~~Q~~~~~~~~~~~~R~~F~~~~F~~~~~L~~Pva  160 (175)
                      +++++|||||++||+++.+...|..+++|.||+|++|.|||+|+||+|+..+.+...+..|.+||+++|+++++|+.|||
T Consensus        86 p~~~~~~HWlv~nIp~~~~~~~G~~~~~Y~gP~Pp~G~HRYvf~ly~q~~~l~~~~~~~~R~~F~~~~F~~~~~Lg~PVa  165 (180)
T 1wko_A           86 PFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLFRQKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVA  165 (180)
T ss_dssp             CTTCCEEEEEEEEEETTSBGGGSEEEECCCCCCCCSSCEEEEEEEEECCTTCCCCCCCCCSTTCCHHHHHHHTTCCSEEE
T ss_pred             CCCccEEEEEEeccCcCccccCCceeeeeCCCCCCCCceEEEEEEEecCCccCCCCCccccCCcCHHHHHHHhCCCCcEE
Confidence            99999999999999998666678999999999999999999999999999888764478999999999999999999999


Q ss_pred             EEEEEEeeCCCCCCC
Q 030564          161 AVFFNAQRETAARRR  175 (175)
Q Consensus       161 ~~~f~~~~d~~~~~~  175 (175)
                      +|||+++||+.+|||
T Consensus       166 ~~fF~~q~d~~~r~~  180 (180)
T 1wko_A          166 AVFFNAQRETAARKR  180 (180)
T ss_dssp             EEEEEECCC------
T ss_pred             EEEEEEEECCcccCC
Confidence            999999999999997

>3axy_A Protein heading DATE 3A; phosphatidylethanolamine-binding protein, 14-3-3 protein, BZ protein, floral induction; HET: SEP; 2.40A {Oryza sativa japonica group} PDB: 1wkp_A

Probab=100.00  E-value=3.8e-52  Score=319.80  Aligned_cols=166  Identities=61%  Similarity=1.017  Sum_probs=156.4

Q ss_pred             CcccchhhhcCCcccccCCCCCCCeEEEEEECCCCeeecCCceeCCcccCCCCeEEEecCCCCcEEEEEEEcCCCCCCCC
Q 030564            1 MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSFFTLIMTDPDVPGPSD   80 (175)
Q Consensus         1 ~~~~~~~l~~~~iipdvl~~f~P~~~L~V~f~~~~~~v~~G~~l~~~~~~~~P~i~~~~~~~~~~ytlvmvDpD~p~~~~   80 (175)
                      |+. +++|++++||||||+.|.|++.|+|.|++  ..|.+|+.|+++++..+|+|+|.+.+.+++|||+|+|||+|++++
T Consensus         5 m~~-~~~l~~~~vipdvl~~F~P~~~l~v~y~s--~~v~~G~~l~~~~~~~~P~l~~~~~~~~~~ytlvm~DpDaP~~~~   81 (170)
T 3axy_A            5 MRD-RDPLVVGRVVGDVLDAFVRSTNLKVTYGS--KTVSNGLELKPSMVTHQPRVEVGGNDMRTFYTLVMVDPDAPSPSD   81 (170)
T ss_dssp             CCT-TCHHHHTTHHHHTBCCCCCCSCEEEEETT--EECCTTEECCGGGSSSCCEEEECCSCTTCEEEEEEEETTCSCTTS
T ss_pred             cch-hchhhhCCccccccCCcCCceEEEEEECC--eEcCCCCEeCHHHhCcCCeEEEeCCCCCcEEEEEEECCCCCCCcc
Confidence            653 79999999999999999999999999997  899999999999999999999998876899999999999999999


Q ss_pred             CCCceEEEEEEEccCCCcCCCCCeeeeeecCCCCCCCCCcEEEEEeeeCCCccccCCCCCCCCcCHHHHHHHhCCCCceE
Q 030564           81 PYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVA  160 (175)
Q Consensus        81 ~~~~~~lHwlv~ni~~~~~~~~g~~~~~Y~~P~P~~g~HRYvflL~~Q~~~~~~~~~~~~R~~F~~~~F~~~~~L~~Pva  160 (175)
                      +++++|||||++||+++.+.+.|+.+++|.||+|++|.|||+|+||+|+..+.+. .+..|.+||+++|+++++|+.|||
T Consensus        82 p~~~~~~HWlv~nIp~~~~~~~G~~~~~Y~gP~Pp~G~HRY~f~ly~q~~~l~~~-~p~~R~~F~~~~F~~~~~Lg~Pva  160 (170)
T 3axy_A           82 PNLREYLHWLVTDIPGTTAASFGQEVMSYESPRPTMGIHRLVFVLFQQLGRQTVY-APGWRQNFNTKDFAELYNLGSPVA  160 (170)
T ss_dssp             CTTCSEEEEEEEEEETTSBGGGSEEEECCCCCCCCSSCEEEEEEEEECSSCCCCC-CCSCSTTCCHHHHHHHTTCCSCSE
T ss_pred             CCCccEEEEEEeCCCCCccccCCceeceecCCCCCCCcEEEEEEEEecCCccCCC-CccccCCcCHHHHHHHhCCCCcEE
Confidence            9999999999999999866778999999999999999999999999999988776 578999999999999999999999


Q ss_pred             EEEEEEeeCC
Q 030564          161 AVFFNAQRET  170 (175)
Q Consensus       161 ~~~f~~~~d~  170 (175)
                      +|||+++||.
T Consensus       161 ~~fF~~q~d~  170 (170)
T 3axy_A          161 AVYFNSQREA  170 (170)
T ss_dssp             EEEEEECCCC
T ss_pred             EEEEEEEecC
Confidence            9999999985

>2iqy_A Phosphatidylethanolamine-binding protein 1; alpha-beta, hydrolase inhibitor; 1.40A {Rattus norvegicus} PDB: 2iqx_A 1b7a_A* 1a44_A 1beh_A 1bd9_A 2l7w_A 2qyq_A* 1kn3_A

Probab=100.00  E-value=4.3e-48  Score=302.01  Aligned_cols=166  Identities=28%  Similarity=0.538  Sum_probs=153.4

Q ss_pred             cchhhhc--CCcccccCCCCCCCeEEEEEECCCCeeecCCceeCCcccCCCCe-EEEecCCCCcEEEEEEEcCCCCCCCC
Q 030564            4 MSDALVL--GRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPK-VEVLGGDMRSFFTLIMTDPDVPGPSD   80 (175)
Q Consensus         4 ~~~~l~~--~~iipdvl~~f~P~~~L~V~f~~~~~~v~~G~~l~~~~~~~~P~-i~~~~~~~~~~ytlvmvDpD~p~~~~   80 (175)
                      +.++|++  ++||||||+. .|+..|.|.|+++ ..|.+|+.|+++++...|+ |+|.+.+.+++|||+|+|||+|++++
T Consensus         4 ~~~~~~~~~~~vipdvl~~-~p~~~l~v~~~~~-~~v~~G~~l~~~~~~~~P~~l~~~~~~~~~~ytlvm~DpDaP~~~~   81 (190)
T 2iqy_A            4 MAADISQWAGPLSLQEVDE-PPQHALRVDYGGV-TVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKD   81 (190)
T ss_dssp             SSCCGGGTTSTTCGGGTSS-CCSEECEEECSSC-BCCSTTEECCGGGGSSCCSEEECTTCCTTSEEEEEEEESSSSCSSS
T ss_pred             HHHHHHHhcCccCCcCcCC-CCCceEEEEECCC-cccCCCCEECHHHHhCCCceEEEccCCCCCEEEEEEECCCCCCCCC
Confidence            5678999  9999999998 9999999999765 7899999999999999999 99988776799999999999999999


Q ss_pred             CCCceEEEEEEEccCCCcCCCCCeeeeeecCCCC--CCCCCcEEEEEeeeCCCccccC------CCCCCCCcCHHHHHHH
Q 030564           81 PYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRP--NIGIHRFVFLLFKQKRRQTEMS------VPASRDRFNTRKFAEE  152 (175)
Q Consensus        81 ~~~~~~lHwlv~ni~~~~~~~~g~~~~~Y~~P~P--~~g~HRYvflL~~Q~~~~~~~~------~~~~R~~F~~~~F~~~  152 (175)
                      +++++|||||++||+++ ++..|..+++|.||+|  |+|.|||+|+||+|+..+.+.+      ....|.+||+++|+++
T Consensus        82 p~~~~~~HWlv~nIp~~-~~~~G~~~~~Y~gP~Pp~g~g~HRY~f~ly~q~~~l~~~~~~l~~~~~~~R~~F~~~~F~~~  160 (190)
T 2iqy_A           82 PKFREWHHFLVVNMKGN-DISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKSGDNRGKFKVESFRKK  160 (190)
T ss_dssp             CTTCCEEEEEEEEEETT-BGGGSEEEECCCCCCCCTTSCCEEEEEEEEECSSCCCCCSCCBCTTCCTTCSSCCHHHHHHH
T ss_pred             CCcCCEEEEEEeCCChh-ccccCccccceeCCCCcCCCCceEEEEEEEEeCCccCcchhhccCCCcccCCCcCHHHHHHH
Confidence            99999999999999988 7888999999999999  7899999999999999877653      3578999999999999


Q ss_pred             hCCCCceEEEEEEEeeCCCC
Q 030564          153 NDLGLPVAAVFFNAQRETAA  172 (175)
Q Consensus       153 ~~L~~Pva~~~f~~~~d~~~  172 (175)
                      ++|+.|||+|||+++||++.
T Consensus       161 ~~Lg~pVA~~fF~~q~d~~v  180 (190)
T 2iqy_A          161 YHLGAPVAGTCFQAEWDDSV  180 (190)
T ss_dssp             TTCCSCSEEEEEEECCCTTH
T ss_pred             hCCCCeeEEEEEEEEccCch
Confidence            99998999999999999853

>2jyz_A CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular modeling, chemical shift variations, titration, unknown function; NMR {Drosophila melanogaster}

Probab=100.00  E-value=2.4e-47  Score=295.33  Aligned_cols=158  Identities=35%  Similarity=0.669  Sum_probs=145.3

Q ss_pred             CCcccccCCCCCCCeEEEEEECCCCeeecCCceeCCcccCCCCeEEEecCCC-CcEEEEEEEcCCCCCCCCCCCceEEEE
Q 030564           11 GRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDM-RSFFTLIMTDPDVPGPSDPYLREHLHW   89 (175)
Q Consensus        11 ~~iipdvl~~f~P~~~L~V~f~~~~~~v~~G~~l~~~~~~~~P~i~~~~~~~-~~~ytlvmvDpD~p~~~~~~~~~~lHw   89 (175)
                      ++||||||+. .|+..|+|.|+++ ..|.+|+.|+++++..+|+|+|.+.+. +++|||+|+|||+|+++++++++||||
T Consensus         2 ~~vipdvl~~-~P~~~l~V~y~~~-~~v~~G~~l~~~~~~~~P~l~~~~~p~~t~~ytlvm~DpDaP~~~~p~~~~~~HW   79 (179)
T 2jyz_A            2 DDIVPDVLDA-VPAGTIKVIYGDD-LEVKQGNELTPTQVKDQPIVSWSGLEGKSNLLTLLMVDPDAPTRQDPKYREILHW   79 (179)
T ss_dssp             CCBTTTTBSS-CCSEECEEESSSS-CCBCTTEECCSSCTTSCCEEECTTTCCSCSEEEEEEECCCSSCTTCCSSCCCSCC
T ss_pred             CcccCcCcCC-CCcCeEEEEECCC-cccCCCCEeCHHHhccCCeEEEeCCCCCceeEEEEEeCCCCCCCccCCCccEEEE
Confidence            6899999999 9999999999864 789999999999999999999988754 499999999999999999999999999


Q ss_pred             EEEccCCCc-CCCCCeeeeeecCCCC--CCCCCcEEEEEeeeCCCccccC------CCCCCCCcCHHHHHHHhCCCCceE
Q 030564           90 IVTDIPGTT-DASFGKEVVNYEIPRP--NIGIHRFVFLLFKQKRRQTEMS------VPASRDRFNTRKFAEENDLGLPVA  160 (175)
Q Consensus        90 lv~ni~~~~-~~~~g~~~~~Y~~P~P--~~g~HRYvflL~~Q~~~~~~~~------~~~~R~~F~~~~F~~~~~L~~Pva  160 (175)
                      |++||+++. ++..|..+++|.||+|  |+|.|||+|+||+|+..+. ..      .+..|.+||+++|+++++|+.|||
T Consensus        80 lv~nIp~~~~~l~~g~~~~~Y~gP~Pp~g~g~HRY~f~ly~q~~~l~-~~~~l~~~~~~~R~~F~~~~F~~~~~Lg~pvA  158 (179)
T 2jyz_A           80 SVVNIPGSNENPSGGHSLADYVGSGPPKDTGLHRYIFLLYRQENKIE-ETPTISNTTRTGRLNFNARDFAAKHGLGEPIA  158 (179)
T ss_dssp             EEECCCTTSSSTTSSEEEECCCSCCSCGGGCSEEEEEEEEEECSCCC-CSSCBCTTCCSSSCCCCTHHHHHHTTCCSCSE
T ss_pred             EEECCCCCccccCcccccccccCCCCCCCCCceEEEEEEEEcCCcCC-chhhccCCCcccCCCcCHHHHHHHhCCCCccE
Confidence            999999875 6788999999999999  7899999999999998876 21      357899999999999999998999


Q ss_pred             EEEEEEeeCCC
Q 030564          161 AVFFNAQRETA  171 (175)
Q Consensus       161 ~~~f~~~~d~~  171 (175)
                      +|||+++||++
T Consensus       159 ~~~F~~q~d~~  169 (179)
T 2jyz_A          159 ANYYQAQYDDY  169 (179)
T ss_dssp             EEEEEECCCTH
T ss_pred             EEEEEEEecCc
Confidence            99999999984

>2gzq_A Phosphatidylethanolamine-binding protein; structural genomics, PSI, protein structure initiative; HET: MSE; 1.30A {Plasmodium vivax} PDB: 2r77_A

Probab=100.00  E-value=3.7e-46  Score=293.13  Aligned_cols=165  Identities=22%  Similarity=0.362  Sum_probs=146.0

Q ss_pred             cccchhhhcCCcccccCCC--CCCCeEEEEEECCCCeeecCCceeCCcccCCCCe-EEEecCCC-CcEEEEEEEcCCCCC
Q 030564            2 AKMSDALVLGRVVGEVIDY--FTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPK-VEVLGGDM-RSFFTLIMTDPDVPG   77 (175)
Q Consensus         2 ~~~~~~l~~~~iipdvl~~--f~P~~~L~V~f~~~~~~v~~G~~l~~~~~~~~P~-i~~~~~~~-~~~ytlvmvDpD~p~   77 (175)
                      +.++++|++++|||||||.  |+|++.|+|.|+++ ..|.+|+.|+++++..+|+ |+|++.+. +++|||+|+|||+|+
T Consensus        12 ~~~~~~l~~~~IipDvl~~~~f~p~~~L~V~y~~~-~~v~~G~~l~~~~~~~~P~~l~~~~~~~~~~~ytLvm~DPDaP~   90 (200)
T 2gzq_A           12 PPTIEELKREKIIPHVFPDENVDLTVDMYISFKSG-KEVNHGNILDLAGTGSVPRNIKFSEEPPEDYCYILFMIDPDFPS   90 (200)
T ss_dssp             SCCHHHHHHTTHHHHTSSSSCCCCCCCEEEEEETT-EEECSSCEEESTTCSSCCSEEEESSCCCTTEEEEEEEEETTCSC
T ss_pred             HHHHHHHHhCCccCcccCCCCCcceeEEEEEECCC-cccCCCCEeCHHHHhCCCceEEEccCCCCCceEEEEEECCCCCC
Confidence            4578999999999999964  99999999999965 8999999999999999998 99998753 799999999999999


Q ss_pred             CCCCCCceEEEEEEEccCCCcCCCCC-----eeeeeecCCCC--CCCCCcEEEEEe--eeCCCccccC-------CCCCC
Q 030564           78 PSDPYLREHLHWIVTDIPGTTDASFG-----KEVVNYEIPRP--NIGIHRFVFLLF--KQKRRQTEMS-------VPASR  141 (175)
Q Consensus        78 ~~~~~~~~~lHwlv~ni~~~~~~~~g-----~~~~~Y~~P~P--~~g~HRYvflL~--~Q~~~~~~~~-------~~~~R  141 (175)
                      ++++++++|||||++||+++ ++..|     ..+++|.||+|  |+|.|||+|+||  +|+..+.+..       ...+|
T Consensus        91 ~~~~~~~~~~HWlv~nIp~~-~~~~g~~~~~~~~~~Y~gP~Pp~g~g~HRYvF~l~~fkQ~~~~~~~~~p~~~~~~~~~R  169 (200)
T 2gzq_A           91 RRRPDGRDYVHWAVSGIKSK-ELVKGTDKNCITLLPYVGPSIKKGTGLHRISFILSLVKEENKGNVTGVPLYRGEHYITR  169 (200)
T ss_dssp             SSCCTTCSEEEEEEEEECSS-EEETTCCTTCEEEECCCCCCCCTTSCCEEEEEEEEEEEGGGTTCBTTBCCCCCGGGCCT
T ss_pred             CCCCCCCCEEEEEEeCCCcC-cccCCccCCCcceeeeeCCCCcCCCCcceEEEEEEEecccCcccccccCcccccccccc
Confidence            99999999999999999986 33333     48999999999  899999999985  9998877542       12389


Q ss_pred             CCcCHH----HHHHHhCCCCceEEEEEEEeeC
Q 030564          142 DRFNTR----KFAEENDLGLPVAAVFFNAQRE  169 (175)
Q Consensus       142 ~~F~~~----~F~~~~~L~~Pva~~~f~~~~d  169 (175)
                      .+||++    +|++++||+ |||+|||+++++
T Consensus       170 ~~F~~~~gv~~F~~~~gL~-pVganfF~~~n~  200 (200)
T 2gzq_A          170 VKFNNCQSAYNVIQMNDMK-IVGFNWCQMRRK  200 (200)
T ss_dssp             THHHHTCCHHHHHHHTTCE-EEEEEEEEEECC
T ss_pred             CccccchhhHHHHHHcCCE-EEEEEEEEEecC
Confidence            999987    899999997 899999999974

>1wpx_B Carboxypeptidase Y inhibitor; carboxypeptidase inhibitor, serine proteinase inhibitor, Pro inhibitor complex; HET: NAG NDG; 2.70A {Saccharomyces cerevisiae} SCOP: b.17.1.1

Probab=100.00  E-value=4.1e-45  Score=291.09  Aligned_cols=165  Identities=30%  Similarity=0.474  Sum_probs=146.5

Q ss_pred             ccchhhhcCCcccccCCC--CCCCeEEEEEECCCCeeecCCceeCCcccCCCCeEEEec----------C-----CCCcE
Q 030564            3 KMSDALVLGRVVGEVIDY--FTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLG----------G-----DMRSF   65 (175)
Q Consensus         3 ~~~~~l~~~~iipdvl~~--f~P~~~L~V~f~~~~~~v~~G~~l~~~~~~~~P~i~~~~----------~-----~~~~~   65 (175)
                      .++++|++++||||||+.  |.|++.|+|.|+++ ..|.+|+.|+++++...|.|+|..          .     +.+++
T Consensus        11 ~~~~~l~~~~IipDvl~~~~F~P~~~L~V~y~~~-~~v~~G~~l~~~~t~~~P~v~~~~~~~~~~~~~~~~~~~p~~~~~   89 (220)
T 1wpx_B           11 ASIDSYKKHGILEDVIHDTSFQPSGILAVEYSSS-APVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQANAYVPQDDDL   89 (220)
T ss_dssp             HHHHHHHHTTHHHHTSCCTTCCCSEEEEEEEETT-EEECSSCBCCGGGGSSCCEEEEEEETTCC------CCCCCCSSCC
T ss_pred             HHHHHHHhCCCCccccCCcCCCCceEEEEEECCC-cEeCCCCCcCHHHhcCCCeeEeCCCCCcccccccccccCCCCCce
Confidence            578999999999999998  99999999999985 679999999999999999999982          2     24799


Q ss_pred             EEEEEEcCCCCCCCCCCCceEEEEEEEccCCCcC--------C--------CCC-eeeeeecCCCC--CCCCCcEEEEEe
Q 030564           66 FTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTD--------A--------SFG-KEVVNYEIPRP--NIGIHRFVFLLF  126 (175)
Q Consensus        66 ytlvmvDpD~p~~~~~~~~~~lHwlv~ni~~~~~--------~--------~~g-~~~~~Y~~P~P--~~g~HRYvflL~  126 (175)
                      |+|+|+|||+|++.++++++||||+++||+++..        .        +.| ...++|.||+|  |+|.|||+|+||
T Consensus        90 ~~lvm~DpDaP~~~~p~~~~~~HW~v~nIp~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~Y~gP~Pp~g~g~HRY~f~ly  169 (220)
T 1wpx_B           90 FTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLY  169 (220)
T ss_dssp             EEEEEEESSSSCSSCCTTCSEEEEEEEEEEECC---------CCEEEEEEECTTCEEEECCCCCCCCTTSCCEEEEEEEE
T ss_pred             EEEEEECCCCCCCCCCCcCcEEEEEEEccCCCccccccccCCCCccceEeecCCccccccccCCCCccCCCCceEEEEEE
Confidence            9999999999999999999999999999987521        1        346 78999999999  688999999999


Q ss_pred             eeCCCccccC--CCCCCCCcC-------HHHHHHHhCCCCceEEEEEEEeeC
Q 030564          127 KQKRRQTEMS--VPASRDRFN-------TRKFAEENDLGLPVAAVFFNAQRE  169 (175)
Q Consensus       127 ~Q~~~~~~~~--~~~~R~~F~-------~~~F~~~~~L~~Pva~~~f~~~~d  169 (175)
                      +|+..+.+..  .+..|.+|+       +++|+++++|+ |||+|||++|||
T Consensus       170 a~~~~l~~~~~~~~~~R~~f~~~~~~f~~~~F~~~~~L~-pVAanfF~~q~~  220 (220)
T 1wpx_B          170 KQPKGVDSSKFSKIKDRPNWGYGTPATGVGKWAKENNLQ-LVASNFFYAETK  220 (220)
T ss_dssp             ECCTTCCGGGSCCCCCSBGGGCCSSSCSHHHHHHTTTCE-EEEEEEEEECCC
T ss_pred             ecCCcCCccccCCcccccCCCccccchhHHHHHHHhCCe-EEEEEEEEEecC
Confidence            9999877542  567888898       99999999995 899999999996

>1fux_A Hypothetical 19.5 kDa protein in EMRE-RUS intergenic region; beta protein, unknown function; 1.81A {Escherichia coli} SCOP: b.17.1.2

Probab=99.88  E-value=1.3e-22  Score=154.81  Aligned_cols=106  Identities=19%  Similarity=0.280  Sum_probs=82.1

Q ss_pred             eeecCCceeCCcccCC---------CCeEEEecCC-CCcEEEEEEEcCCCCCCCCCCCceEEEEEEEccCCCc-CCCCC-
Q 030564           36 QQVYNGHEMFPSQVTQ---------KPKVEVLGGD-MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTT-DASFG-  103 (175)
Q Consensus        36 ~~v~~G~~l~~~~~~~---------~P~i~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwlv~ni~~~~-~~~~g-  103 (175)
                      ..+..|+.|+.+.+..         +|.|+|.+.. .+++|+|+|+|||+|++     ++|+||+++||+++. .+..| 
T Consensus         8 ~~~~~g~~ip~~~~~~~~~~~G~n~sP~l~w~~~P~~t~s~ali~~DPDAP~~-----~~~~HW~v~nIp~~~~~l~~g~   82 (166)
T 1fux_A            8 NEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTG-----SGWWHWTVVNIPATVTYLPVDA   82 (166)
T ss_dssp             SSCCTTSBCCGGGBCEETTEECCCCCCCEEEECCCTTCCEEEEEEEETTSTTT-----TCEEEEEEEEEETTCCEECTTT
T ss_pred             cCcCCcCCCCHHHhccccccCCCCcCCeEEEeCCCCCCeEEEEEEECCCCCCC-----CcEEEeEEeCcCCCcccccCCc
Confidence            4577899999988766         9999999874 46999999999999964     479999999998753 12111 


Q ss_pred             -----------e-------eeeeecCCCC--CCCCCcEEEEEeeeCC-CccccCCCCCCCCcCHHHHHHH
Q 030564          104 -----------K-------EVVNYEIPRP--NIGIHRFVFLLFKQKR-RQTEMSVPASRDRFNTRKFAEE  152 (175)
Q Consensus       104 -----------~-------~~~~Y~~P~P--~~g~HRYvflL~~Q~~-~~~~~~~~~~R~~F~~~~F~~~  152 (175)
                                 .       ....|.||+|  |+|.|||+|+||+|+. .+.++      .++...++.+.
T Consensus        83 ~~~~~~~l~~g~~~g~nd~g~~~Y~GP~PP~g~g~HRY~F~lyald~~~l~l~------~~~~~~~l~~a  146 (166)
T 1fux_A           83 GRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVD------SNSSGALVGYM  146 (166)
T ss_dssp             TCTTCTTSCTTCEECCCTTSSSSCCCBCCCTTCCCEECEEEEEEESCSCCCCC------TTCCHHHHHHH
T ss_pred             cccccccCCCCcEEeecCCCCccccCCCCcCCCCcEEEEEEEeEeccccCCCC------CCCCHHHHHHH
Confidence                       1       4789999999  6779999999999997 57764      34455555433

>3n08_A Putative phosphatidylethanolamine-binding protein; eukarytic homolog RAF kinase inhibitor protein (RKIP). csgid structural genomics; 1.25A {Chlamydia trachomatis} SCOP: b.17.1.0

Probab=99.86  E-value=7.1e-21  Score=143.25  Aligned_cols=112  Identities=20%  Similarity=0.286  Sum_probs=85.5

Q ss_pred             eecCCceeCCccc----CCCCeEEEecCC-CCcEEEEEEEcCCCCCCCCCCCceEEEEEEEccCCCc-CCCCCe------
Q 030564           37 QVYNGHEMFPSQV----TQKPKVEVLGGD-MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTT-DASFGK------  104 (175)
Q Consensus        37 ~v~~G~~l~~~~~----~~~P~i~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwlv~ni~~~~-~~~~g~------  104 (175)
                      .+..|..|+...+    ..+|.|+|.+.. .+++|+|+|+|||+|++.++ .++|+||+++||+++. .+..|.      
T Consensus        10 ~f~~g~~ip~~~t~~G~n~SP~l~w~~~P~~tks~ali~~DpDAPs~~~~-~~~~~HWvv~nIp~~~~~l~~g~~~g~~~   88 (153)
T 3n08_A           10 AFSYGRPIPKKYSCQGVGISPPLSFSDVPREAKSLVLIVEDPDVPPSVRE-DGLWIHWIVYNLSPVVSNLAEGAQIFAVQ   88 (153)
T ss_dssp             TBCTTEECCGGGSTTSCCCCCCEEEECCCTTCCEEEEEEEETTSCTTTCT-TSCEEEEEEEEECTTCCEECTTCCCSSEE
T ss_pred             CcCCCCCCCHHHcCCCCCcCcEEEEcCCCCCCeEEEEEEECCCCCCccCC-CCcEEEEEEEcCCCCcccccCCCCCCceE
Confidence            3455666666543    468999999875 46999999999999998875 4799999999999853 222221      


Q ss_pred             -----eeeeecCCCCCCCCCcEEEEEeeeCCCccccCCCCCCCCcCHHHHHHHhCC
Q 030564          105 -----EVVNYEIPRPNIGIHRFVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDL  155 (175)
Q Consensus       105 -----~~~~Y~~P~P~~g~HRYvflL~~Q~~~~~~~~~~~~R~~F~~~~F~~~~~L  155 (175)
                           ....|.||+|+.|.|||+|+||+|+..+.++      .++...++.+...-
T Consensus        89 g~n~~g~~~Y~GP~PP~g~HrY~F~vyAld~~L~l~------~~~~~~~l~~a~~g  138 (153)
T 3n08_A           89 GLNTAGEIGYCPPCPPDAKHRYYFYAYALDVVLSDE------EGVTKEQLLEAMDG  138 (153)
T ss_dssp             CBCTTSSBSCCCCCCSSSCEEEEEEEEEESSCCCCC------SSCCHHHHHHHHTT
T ss_pred             eecCCCCccccCCcCcCCCEEEEEEEEEECCcCCCC------CCCCHHHHHHHhhh
Confidence                 4689999999766799999999999987664      25666776665443

>1fjj_A Hypothetical 17.1 kDa protein in MODC-BIOA intergenic region; PEPB family, lipid binding protein; HET: MSE EPE; 1.66A {Escherichia coli} SCOP: b.17.1.2 PDB: 1vi3_A*

Probab=99.83  E-value=1.4e-20  Score=142.65  Aligned_cols=81  Identities=23%  Similarity=0.374  Sum_probs=64.9

Q ss_pred             CCCCeEEEecCC-CCcEEEEEEEcCCCCCCCCCCCceEEEEEEEccCCCc-CCCCCe------------------eeeee
Q 030564           50 TQKPKVEVLGGD-MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTT-DASFGK------------------EVVNY  109 (175)
Q Consensus        50 ~~~P~i~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwlv~ni~~~~-~~~~g~------------------~~~~Y  109 (175)
                      ..+|.|+|.+.. .+++|+|+|+|||+|++     ++|+||+++||+++. .+..|.                  ....|
T Consensus        30 n~sP~l~w~~~P~~t~s~ali~~DPDAP~~-----~~~~HW~v~nIp~~~~~l~~g~~~~~~~~~~g~~~g~n~~g~~~Y  104 (159)
T 1fjj_A           30 NISPHLAWDDVPAGTKSFVVTCYDPDAPTG-----SGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGY  104 (159)
T ss_dssp             CCCCCEEEECCCTTCCEEEEEEEETTSTTT-----TCEEEEEEEEEETTCCEECTTGGGTSSCCCTTCEECBCTTSSBSC
T ss_pred             CcCCeEEEcCCCCCCeEEEEEEECCCCCCC-----CcEEEEEEEccCCCccccCCCcccccccCCCCcEEeecCCCCCcc
Confidence            568999999874 57999999999999974     469999999998753 122111                  47899


Q ss_pred             cCCCCCCC-CCcEEEEEeeeCC-Ccccc
Q 030564          110 EIPRPNIG-IHRFVFLLFKQKR-RQTEM  135 (175)
Q Consensus       110 ~~P~P~~g-~HRYvflL~~Q~~-~~~~~  135 (175)
                      .||+|+.| .|||+|+||+|+. .+.++
T Consensus       105 ~GP~PP~g~~HRY~F~lyald~~~l~l~  132 (159)
T 1fjj_A          105 DGAAPPKGETHRYIFTVHALDIERIDVD  132 (159)
T ss_dssp             CCBCCSTTCCEEEEEEEEEESSSCCSCC
T ss_pred             cCCCCcCCCceEEEEEEEEccCcccCCC
Confidence            99999555 8999999999997 67764

>2evv_A Hypothetical protein HP0218; alpha-beta structure, dimer, structural genomics, PSI, prote structure initiative; HET: MSE; 2.59A {Helicobacter pylori}

Probab=99.79  E-value=3.5e-19  Score=139.86  Aligned_cols=108  Identities=17%  Similarity=0.182  Sum_probs=78.1

Q ss_pred             CCCCeEEEecCCCCcEEEEEEEcCCCCCCCCCCCceEEEEEEEccCCCcCCC--------------------CCeee---
Q 030564           50 TQKPKVEVLGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDAS--------------------FGKEV---  106 (175)
Q Consensus        50 ~~~P~i~~~~~~~~~~ytlvmvDpD~p~~~~~~~~~~lHwlv~ni~~~~~~~--------------------~g~~~---  106 (175)
                      ...|.|+|.+.+.+++|+|+|+|||+|++.   .++|+||+++||+.+ .+.                    .|...   
T Consensus        58 ~~Sp~L~W~~~~gtks~aLvm~DPDAP~~~---g~~~~HWvv~NI~~~-~l~eg~~~~~~g~~qG~N~~~~~~g~~~~~~  133 (207)
T 2evv_A           58 TYSPKISWQKVEGAQSYALELIDHDAQKVC---GMPFVHWVVGNIAHN-VLEENASMMDKRIVQGVNSLTQGFIRSPLNE  133 (207)
T ss_dssp             CCCCCEEECCCTTCSEEEEEEEETTHHHHH---SSCEEEEEEEEECSS-EECTTHHHHCSSSEECCCTTCSCSTTCSSCH
T ss_pred             CccceEEEecCCCCeEEEEEEECCCCCCCC---CCcEEEEEEeCCCCC-ccccCcccCCCCceecccccccccccccccc
Confidence            345679998876689999999999999864   368999999999533 221                    12211   


Q ss_pred             ----------eeecCCCCCCCCCcEEEEEeeeCC-CccccCCCCCCCCcCHHHHHHHhCCCCceEEEEEEEee
Q 030564          107 ----------VNYEIPRPNIGIHRFVFLLFKQKR-RQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQR  168 (175)
Q Consensus       107 ----------~~Y~~P~P~~g~HRYvflL~~Q~~-~~~~~~~~~~R~~F~~~~F~~~~~L~~Pva~~~f~~~~  168 (175)
                                ..|.||+|+.|.|||+|+||+|+. .+.+.      .+|...++.+...-.. +|-.-+....
T Consensus       134 ~~k~~~~~~~~~Y~GP~PP~G~HRYvF~vyALd~~~L~l~------~~~~~~~l~~am~gHv-La~a~l~g~y  199 (207)
T 2evv_A          134 SEKQRSNLNNSVYIGPMPPNGDHHYLIQVYALDIPKLALK------APFFLGDLHDKMRNHI-IAIGRKEFLY  199 (207)
T ss_dssp             HHHHHHHHHTCSCCCCCCSSSCEEEEEEEEEESSSCCCCC------SSCCHHHHHHHHTTCE-EEEEEEEEEE
T ss_pred             cccccccccccccCCCCCCCCcEEEEEEEEEecCccCCCC------CCCCHHHHHHHhhcCe-EEEEEEEEEE
Confidence                      889999998889999999999997 66653      4577777766654332 4444444333

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	175
d1qoua_	164	b.17.1.1 (A:) Centroradialis protein Cen {Garden s	3e-67
d1a44a_	185	b.17.1.1 (A:) Phosphatidylethanolamine binding pro	6e-51
d1wpxb1	219	b.17.1.1 (B:501-719) Carboxypeptidase Y inhibitor	5e-45
d1fjja_	159	b.17.1.2 (A:) Hypothetical protein YbhB {Escherich	2e-05
d1fuxa_	165	b.17.1.2 (A:) Hypothetical protein YbcL {Escherich	3e-05

>d1qoua_ b.17.1.1 (A:) Centroradialis protein Cen {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]} Length = 164

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Centroradialis protein Cen
species: Garden snapdragon (Antirrhinum majus) [TaxId: 4151]

 Score =  200 bits (509), Expect = 3e-67
 Identities = 124/164 (75%), Positives = 141/164 (85%), Gaps = 4/164 (2%)

Query: 11  GRVVGEVIDYFTPSVKMTITYSS--IKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSFFTL 68
           GRV+G+V+D+FT +VKM++ Y+S    + VYNGHE+FPS VT  P+VEV GGDMRSFFTL
Sbjct: 1   GRVIGDVVDHFTSTVKMSVIYNSNNSIKHVYNGHELFPSAVTSTPRVEVHGGDMRSFFTL 60

Query: 69  IMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLLFKQ 128
           IMTDPDVPGPSDPYLREHLHWIVTDIPGTTD+SFGKEVV+YE+PRPNIGIHRFVFLLFKQ
Sbjct: 61  IMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSSFGKEVVSYEMPRPNIGIHRFVFLLFKQ 120

Query: 129 KRRQTEMSVP--ASRDRFNTRKFAEENDLGLPVAAVFFNAQRET 170
           K+R   M  P    RD FNTRKF +EN+LGLPVAAVFFN QRET
Sbjct: 121 KKRGQAMLSPPVVCRDGFNTRKFTQENELGLPVAAVFFNCQRET 164

>d1a44a_ b.17.1.1 (A:) Phosphatidylethanolamine binding protein, PEBP {Cow (Bos taurus) [TaxId: 9913]} Length = 185

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Phosphatidylethanolamine binding protein, PEBP
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  159 bits (404), Expect = 6e-51
 Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 17/176 (9%)

Query: 1   MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKP-KVEVLG 59
           ++K S  L L       +D   P   + + Y    +    G  + P+QV  +P  +   G
Sbjct: 4   LSKWSGPLSLQE-----VD-ERPQHPLQVKYGG-AEVDELGKVLTPTQVKNRPTSITWDG 56

Query: 60  GDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGKEVVNYEIPR--PNIG 117
            D    +TL++TDPD P   DP  RE  H++V ++ G  + S G  + +Y         G
Sbjct: 57  LDPGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKG-NNISSGTVLSDYVGSGPPKGTG 115

Query: 118 IHRFVFLLFKQKRRQT------EMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQ 167
           +HR+V+L+++Q+                 R +F    F ++ +LG PVA   + A+
Sbjct: 116 LHRYVWLVYEQEGPLKCDEPILSNRSGDHRGKFKVASFRKKYELGAPVAGTCYQAE 171

>d1wpxb1 b.17.1.1 (B:501-719) Carboxypeptidase Y inhibitor {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 219

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Carboxypeptidase Y inhibitor
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  145 bits (367), Expect = 5e-45
 Identities = 48/209 (22%), Positives = 75/209 (35%), Gaps = 47/209 (22%)

Query: 6   DALVLGRVVGEVID--YFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMR 63
           D+     ++ +VI    F PS  + + YSS    V  G+ +   +   KP+ +       
Sbjct: 13  DSYKKHGILEDVIHDTSFQPSGILAVEYSS-SAPVAMGNTLPTEKARSKPQFQFTFNKQM 71

Query: 64  ---------------SFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTT---------- 98
                            FTL+MTDPD P  +D    E  H +  D+              
Sbjct: 72  QKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGAT 131

Query: 99  -------DASFGKEVVNYEIPRP--NIGIHRFVFLLFKQKRRQTEMSVPA---------S 140
                  +      ++ Y  P P    G HR+VFLL+KQ +                   
Sbjct: 132 EFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFSKIKDRPNWGYG 191

Query: 141 RDRFNTRKFAEENDLGLPVAAVFFNAQRE 169
                  K+A+EN+L   VA+ FF A+ +
Sbjct: 192 TPATGVGKWAKENNLQ-LVASNFFYAETK 219

>d1fjja_ b.17.1.2 (A:) Hypothetical protein YbhB {Escherichia coli [TaxId: 562]} Length = 159

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Prokaryotic PEBP-like proteins
domain: Hypothetical protein YbhB
species: Escherichia coli [TaxId: 562]

 Score = 40.3 bits (94), Expect = 2e-05
 Identities = 19/99 (19%), Positives = 31/99 (31%), Gaps = 25/99 (25%)

Query: 66  FTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDA-------------------SFGKEV 106
           F +   DPD P  S  +     HW+V ++P  T                           
Sbjct: 47  FVVTCYDPDAPTGSGWW-----HWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGK 101

Query: 107 VNYEIPRPNIG-IHRFVFLLFKQKRRQTEMSVPASRDRF 144
             Y+   P  G  HR++F +      + ++   AS    
Sbjct: 102 TGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMV 140

>d1fuxa_ b.17.1.2 (A:) Hypothetical protein YbcL {Escherichia coli [TaxId: 562]} Length = 165

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Prokaryotic PEBP-like proteins
domain: Hypothetical protein YbcL
species: Escherichia coli [TaxId: 562]

 Score = 40.1 bits (93), Expect = 3e-05
 Identities = 18/101 (17%), Positives = 30/101 (29%), Gaps = 27/101 (26%)

Query: 66  FTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDA--------------SFGKEVVNYE- 110
           F + + DPD P  S  +     HW V +IP T                 +   +  N   
Sbjct: 47  FAVTVYDPDAPTGSGWW-----HWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFG 101

Query: 111 -------IPRPNIGIHRFVFLLFKQKRRQTEMSVPASRDRF 144
                   P      H + F ++  K  +  +   +S    
Sbjct: 102 YAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGALV 142

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	175
d1qoua_	164	Centroradialis protein Cen {Garden snapdragon (Ant	100.0
d1wpxb1	219	Carboxypeptidase Y inhibitor {Baker's yeast (Sacch	100.0
d1a44a_	185	Phosphatidylethanolamine binding protein, PEBP {Co	100.0
d1fuxa_	165	Hypothetical protein YbcL {Escherichia coli [TaxId	99.66
d1fjja_	159	Hypothetical protein YbhB {Escherichia coli [TaxId	99.6

>d1qoua_ b.17.1.1 (A:) Centroradialis protein Cen {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Centroradialis protein Cen
species: Garden snapdragon (Antirrhinum majus) [TaxId: 4151]

Probab=100.00  E-value=4.3e-52  Score=316.09  Aligned_cols=160  Identities=77%  Similarity=1.280  Sum_probs=144.2

Q ss_pred             CCcccccCCCCCCCeEEEEEECCCC--eeecCCceeCCcccCCCCeEEEecCCCCcEEEEEEEcCCCCCCCCCCCceEEE
Q 030564           11 GRVVGEVIDYFTPSVKMTITYSSIK--QQVYNGHEMFPSQVTQKPKVEVLGGDMRSFFTLIMTDPDVPGPSDPYLREHLH   88 (175)
Q Consensus        11 ~~iipdvl~~f~P~~~L~V~f~~~~--~~v~~G~~l~~~~~~~~P~i~~~~~~~~~~ytlvmvDpD~p~~~~~~~~~~lH   88 (175)
                      .+||||||+.|.|++.|+|.|+++.  ..|.+|+.|++++++.+|+|+|...+.+++|||+|+|||+|++.++++++|||
T Consensus         1 ~~vipdvld~F~P~~~l~V~y~~~~~~~~V~~G~~l~~~~t~~~P~v~~~~~~~~~~YtlvMvDpDap~~~~~~~~~~lH   80 (164)
T d1qoua_           1 GRVIGDVVDHFTSTVKMSVIYNSNNSIKHVYNGHELFPSAVTSTPRVEVHGGDMRSFFTLIMTDPDVPGPSDPYLREHLH   80 (164)
T ss_dssp             CTTCTTTSCCCCCCSCEEEEECC---CEECCTTCBCCGGGSSSCCEEEECCCCTTCEEEEEEEECSCSCSSSCTTCCEEE
T ss_pred             CcCCCcccCCCCCCcEEEEEECCCccceEecCCCEeCHHHhccCCEEEEecCCCCceEEEEEECCCCCCCCCCccceEEE
Confidence            4799999999999999999999852  35899999999999999999999888789999999999999999999999999


Q ss_pred             EEEEccCCCcCCCCCeeeeeecCCCCCCCCCcEEEEEeeeCCCccccC--CCCCCCCcCHHHHHHHhCCCCceEEEEEEE
Q 030564           89 WIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLLFKQKRRQTEMS--VPASRDRFNTRKFAEENDLGLPVAAVFFNA  166 (175)
Q Consensus        89 wlv~ni~~~~~~~~g~~~~~Y~~P~P~~g~HRYvflL~~Q~~~~~~~~--~~~~R~~F~~~~F~~~~~L~~Pva~~~f~~  166 (175)
                      ||++||++......|+.+++|.+|.|++|+|||+||||+|+.......  ...+|.+||+++|+++++|+.|||+|||+|
T Consensus        81 Wlv~nip~~~~~~~~~~~~~Y~~P~P~tG~HRYvflLf~Q~~~~~~~~~~~~~~R~~F~~~~F~~~~~L~~Pva~n~F~~  160 (164)
T d1qoua_          81 WIVTDIPGTTDSSFGKEVVSYEMPRPNIGIHRFVFLLFKQKKRGQAMLSPPVVCRDGFNTRKFTQENELGLPVAAVFFNC  160 (164)
T ss_dssp             EEEEEEETTSBGGGSEEEECCCCCCCCSSCEEEEEEEEECSSCC-------CCCSBTCCHHHHHHHTTCCSCSEEEEEEE
T ss_pred             EEEecCCCCccccCCceecccCCCCCCCceeEEEEEEEEcCCCcccccCCCccccCCcCHHHHHHHhCCCCceeEEEEEe
Confidence            999999987667778999999999999999999999999998765432  456899999999999999998999999999


Q ss_pred             eeCC
Q 030564          167 QRET  170 (175)
Q Consensus       167 ~~d~  170 (175)
                      |+|+
T Consensus       161 q~~~  164 (164)
T d1qoua_         161 QRET  164 (164)
T ss_dssp             CCCC
T ss_pred             ecCC
Confidence            9985

>d1wpxb1 b.17.1.1 (B:501-719) Carboxypeptidase Y inhibitor {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Carboxypeptidase Y inhibitor
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.4e-48  Score=309.01  Aligned_cols=165  Identities=29%  Similarity=0.430  Sum_probs=145.4

Q ss_pred             ccchhhhcCCcccccCC--CCCCCeEEEEEECCCCeeecCCceeCCcccCCCCeEEEecC---------------CCCcE
Q 030564            3 KMSDALVLGRVVGEVID--YFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGG---------------DMRSF   65 (175)
Q Consensus         3 ~~~~~l~~~~iipdvl~--~f~P~~~L~V~f~~~~~~v~~G~~l~~~~~~~~P~i~~~~~---------------~~~~~   65 (175)
                      .++++|++++||||||+  .|+|++.|+|.|+++ ..|.+|+.|++++++.+|+|+|...               +.+++
T Consensus        10 ~~~~~~~~~~Iipdvl~~~~F~P~~~L~V~y~~~-~~V~~G~~l~p~~t~~~P~i~~~~~~~~~~~~~~~~~~~~~~~~~   88 (219)
T d1wpxb1          10 ASIDSYKKHGILEDVIHDTSFQPSGILAVEYSSS-APVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQANAYVPQDDDL   88 (219)
T ss_dssp             HHHHHHHHTTHHHHTSCCTTCCCSEEEEEEEETT-EEECSSCBCCGGGGSSCCEEEEEEETTCC------CCCCCCSSCC
T ss_pred             HHHHHHHhcCCCCccCCCCCCCCcEEEEEEECCC-cCcCCCCEeCHHHhccCCEEEEecCccccccccccccccCCCCCe
Confidence            36789999999999998  599999999999875 7899999999999999999999642               23678


Q ss_pred             EEEEEEcCCCCCCCCCCCceEEEEEEEccCCCcC-----------------CCCCeeeeeecCCCC--CCCCCcEEEEEe
Q 030564           66 FTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTD-----------------ASFGKEVVNYEIPRP--NIGIHRFVFLLF  126 (175)
Q Consensus        66 ytlvmvDpD~p~~~~~~~~~~lHwlv~ni~~~~~-----------------~~~g~~~~~Y~~P~P--~~g~HRYvflL~  126 (175)
                      |||+|+|||+|+++++++++|||||++||+.+..                 ...|..+++|+||+|  |+|+|||+|+||
T Consensus        89 ytlvm~DPDaP~~~~~~~~~~~HWlv~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~gP~Pp~gtg~HRYvf~l~  168 (219)
T d1wpxb1          89 FTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLY  168 (219)
T ss_dssp             EEEEEEESSSSCSSCCTTCSEEEEEEEEEEECC---------CCEEEEEEECTTCEEEECCCCCCCCTTSCCEEEEEEEE
T ss_pred             EEEEEECCCCCCCCCCCcceEEEEEEecCCccccccccccCccccCcccccccCCceeecccCCCCCCCCCceEEEEEEE
Confidence            9999999999999999999999999999986421                 245788999999999  789999999999


Q ss_pred             eeCCCccccC---------CCCCCCCcCHHHHHHHhCCCCceEEEEEEEeeC
Q 030564          127 KQKRRQTEMS---------VPASRDRFNTRKFAEENDLGLPVAAVFFNAQRE  169 (175)
Q Consensus       127 ~Q~~~~~~~~---------~~~~R~~F~~~~F~~~~~L~~Pva~~~f~~~~d  169 (175)
                      +|+..++...         ....|.+||+++|++++||+ |||+|||++|+.
T Consensus       169 ~Q~~~~~~~~~~~~~~~~~~~~~R~~F~~~~F~~~~~L~-pVa~n~F~~q~~  219 (219)
T d1wpxb1         169 KQPKGVDSSKFSKIKDRPNWGYGTPATGVGKWAKENNLQ-LVASNFFYAETK  219 (219)
T ss_dssp             ECCTTCCGGGSCCCCCSBGGGCCSSSCSHHHHHHTTTCE-EEEEEEEEECCC
T ss_pred             EccCCCCcccccccccccccccccCCCCHHHHHHHhCCE-EEEEEEEEEecC
Confidence            9998876542         12479999999999999998 999999999974

>d1a44a_ b.17.1.1 (A:) Phosphatidylethanolamine binding protein, PEBP {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Phosphatidylethanolamine binding protein, PEBP
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.3e-47  Score=296.15  Aligned_cols=150  Identities=28%  Similarity=0.521  Sum_probs=137.1

Q ss_pred             CCCCCeEEEEEECCCCeeecCCceeCCcccCCCCe-EEEecCCCCcEEEEEEEcCCCCCCCCCCCceEEEEEEEccCCCc
Q 030564           20 YFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPK-VEVLGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTT   98 (175)
Q Consensus        20 ~f~P~~~L~V~f~~~~~~v~~G~~l~~~~~~~~P~-i~~~~~~~~~~ytlvmvDpD~p~~~~~~~~~~lHwlv~ni~~~~   98 (175)
                      .+.|++.|+|.|+++ ..+.+|+.|++++++.+|+ +.|...+.+++|||+|+|||+|+++++++++|||||++||++. 
T Consensus        17 d~~P~~~L~V~y~~~-~~v~~G~~l~p~~~~~~P~~v~~~~~~~~~~YtlvMvDPDaPs~~~~~~~e~lHWlv~Ni~~~-   94 (185)
T d1a44a_          17 DERPQHPLQVKYGGA-EVDELGKVLTPTQVKNRPTSITWDGLDPGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKGN-   94 (185)
T ss_dssp             SCCCSEECEEEETTE-EECSTTEECCTTTTSSCCSEEECTTCCTTSEEEEEEEETTSSCSSSCTTCCEEEEEEEEEETT-
T ss_pred             ccCCCceEEEEECCc-eecCCCCEECHHHHhcCCceEEecCCCCCCeEEEEEECCCCCCCCCCCcceEEEEEEeCCCCC-
Confidence            569999999999985 5678999999999999995 7777777789999999999999999999999999999999987 


Q ss_pred             CCCCCeeeeeecCCCC--CCCCCcEEEEEeeeCCCccccC------CCCCCCCcCHHHHHHHhCCCCceEEEEEEEeeCC
Q 030564           99 DASFGKEVVNYEIPRP--NIGIHRFVFLLFKQKRRQTEMS------VPASRDRFNTRKFAEENDLGLPVAAVFFNAQRET  170 (175)
Q Consensus        99 ~~~~g~~~~~Y~~P~P--~~g~HRYvflL~~Q~~~~~~~~------~~~~R~~F~~~~F~~~~~L~~Pva~~~f~~~~d~  170 (175)
                      ++..|+.+++|+||.|  |+|+|||+|+||+|++++.+..      ....|.+||+++|+++++|+.|||+|||+++||+
T Consensus        95 ~~~~g~~l~~Y~~P~Pp~gtg~HRYvflLf~Q~~~~~~~~~~~~~~~~~~R~~f~~~~F~~~~~L~~Pva~nfF~~~~D~  174 (185)
T d1a44a_          95 NISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQEGPLKCDEPILSNRSGDHRGKFKVASFRKKYELGAPVAGTCYQAEWDD  174 (185)
T ss_dssp             CGGGSEEEECCCCCCCCTTSCCEEEEEEEEECSSCCCCCCCCBCTTCCTTCTTCCHHHHHHHTTCCSCSEEEEEEECCCT
T ss_pred             cCCCCeEeeeEecCcCCCCCCceEEEEEEEEccCCCCccccccCCCCccccCCCCHHHHHHHcCCCCCeEEEEEEEecCc
Confidence            6788999999999999  8999999999999998877642      3467999999999999999999999999999998


Q ss_pred             C
Q 030564          171 A  171 (175)
Q Consensus       171 ~  171 (175)
                      +
T Consensus       175 ~  175 (185)
T d1a44a_         175 Y  175 (185)
T ss_dssp             T
T ss_pred             H
Confidence            6

>d1fuxa_ b.17.1.2 (A:) Hypothetical protein YbcL {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Prokaryotic PEBP-like proteins
domain: Hypothetical protein YbcL
species: Escherichia coli [TaxId: 562]

Probab=99.66  E-value=1.2e-16  Score=119.78  Aligned_cols=94  Identities=22%  Similarity=0.354  Sum_probs=70.0

Q ss_pred             eeecCCceeCCccc---------CCCCeEEEecCC-CCcEEEEEEEcCCCCCCCCCCCceEEEEEEEccCCCcC-C----
Q 030564           36 QQVYNGHEMFPSQV---------TQKPKVEVLGGD-MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTD-A----  100 (175)
Q Consensus        36 ~~v~~G~~l~~~~~---------~~~P~i~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwlv~ni~~~~~-~----  100 (175)
                      ..+..|..|+.+.+         ..+|.|+|.+.. .++.|+|+|.|||+|...     .|+||++.||+.+.. +    
T Consensus         7 ~~f~~g~~ip~~~~~~~~tc~G~n~SP~L~w~~~P~gtks~ali~~D~Dap~~~-----~~~HWlv~nIp~~~~~l~~~~   81 (165)
T d1fuxa_           7 NEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGS-----GWWHWTVVNIPATVTYLPVDA   81 (165)
T ss_dssp             SSCCTTSBCCGGGBCEETTEECCCCCCCEEEECCCTTCCEEEEEEEETTSTTTT-----CEEEEEEEEEETTCCEECTTT
T ss_pred             CCcCCcCCCCHhHhccCCCCCCCccCccEEecCCCCCCeEEEEEEeCCCCCCCC-----cceEEEEEccCccccccccCc
Confidence            34566777776532         358999999874 479999999999998653     599999999986421 1    


Q ss_pred             --C-------------CCeeeeeecCCCC--CCCCCcEEEEEeeeCCC-ccc
Q 030564          101 --S-------------FGKEVVNYEIPRP--NIGIHRFVFLLFKQKRR-QTE  134 (175)
Q Consensus       101 --~-------------~g~~~~~Y~~P~P--~~g~HRYvflL~~Q~~~-~~~  134 (175)
                        .             .+.....|.||+|  |.|.|||+|.||+.+.. +.+
T Consensus        82 ~~~~~~~~~~g~~~g~n~~g~~~Y~gP~PP~G~~~H~Y~f~vyAL~~~~l~l  133 (165)
T d1fuxa_          82 GRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPV  133 (165)
T ss_dssp             TCTTCTTSCTTCEECCCTTSSSSCCCBCCCTTCCCEECEEEEEEESCSCCCC
T ss_pred             CccccccCCCCeEEecccCCCcCCCCCCCcCCCCcEEEEEEEEEcCCccCCC
Confidence              0             0123457999998  67899999999999753 444

>d1fjja_ b.17.1.2 (A:) Hypothetical protein YbhB {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Prokaryotic PEBP-like proteins
domain: Hypothetical protein YbhB
species: Escherichia coli [TaxId: 562]

Probab=99.60  E-value=2.5e-15  Score=111.89  Aligned_cols=112  Identities=21%  Similarity=0.292  Sum_probs=77.0

Q ss_pred             eecCCceeCCcccC---------CCCeEEEecCC-CCcEEEEEEEcCCCCCCCCCCCceEEEEEEEccCCCcC-CC----
Q 030564           37 QVYNGHEMFPSQVT---------QKPKVEVLGGD-MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTD-AS----  101 (175)
Q Consensus        37 ~v~~G~~l~~~~~~---------~~P~i~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwlv~ni~~~~~-~~----  101 (175)
                      .+..|..|+...+.         .+|.|+|.+.. .++.|.|+|.|||+|...     .|+||++.||+.... +.    
T Consensus         8 ~f~~g~~iP~~~t~~~~~~~G~n~SP~l~w~~~P~~tks~ali~~D~dap~~~-----~~~HW~~~nIp~~~~~l~~g~~   82 (159)
T d1fjja_           8 DLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGS-----GWWHWVVVNLPADTRVLPQGFG   82 (159)
T ss_dssp             SCCTTSBCCGGGBCSSTTCCCCCCCCCEEEECCCTTCCEEEEEEEETTSTTTT-----CEEEEEEEEEETTCCEECTTGG
T ss_pred             ccCCcCCCCHHHhcCCCCCCCCccCceEEecCCCCCCeEEEEEEECCCCCCCC-----CceEEEEEccCCCccccccccc
Confidence            45667777776662         57999999874 479999999999998653     599999999986531 10    


Q ss_pred             -------CC-------eeeeeecCCCCCCC-CCcEEEEEeeeC-CCccccCCCCCCCCcCHHHHHHHhCCC
Q 030564          102 -------FG-------KEVVNYEIPRPNIG-IHRFVFLLFKQK-RRQTEMSVPASRDRFNTRKFAEENDLG  156 (175)
Q Consensus       102 -------~g-------~~~~~Y~~P~P~~g-~HRYvflL~~Q~-~~~~~~~~~~~R~~F~~~~F~~~~~L~  156 (175)
                             .|       .....|.||+|+.| .|||+|.||+.+ +.+.+..   ....-++.+-++.+-|.
T Consensus        83 ~~~~~~~~g~~~g~n~~g~~~Y~gPcPP~g~~H~Y~f~vyALd~~~l~l~~---~~~~~~l~~ai~g~vl~  150 (159)
T d1fjja_          83 SGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDE---GASGAMVGFNVHFHSLA  150 (159)
T ss_dssp             GTSSCCCTTCEECBCTTSSBSCCCBCCSTTCCEEEEEEEEEESSSCCSCCT---TCCHHHHHHHHHHHEEE
T ss_pred             CccccCCCccEEecccCCCcceeCCCCcCCCcEEEEEEEEEecCccCCCCC---CCCHHHHHHHHhhCEEE
Confidence                   11       12456999999443 799999999998 4566541   11222344445555443