Citrus Sinensis ID: 030574

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-----
Protein Sequence
MAPQIDSARRRMTAVANHLVPVISSDSNSGFIGLNNASMNDSYHRIHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccEEEEEEccccccccccHHHHHHHHHHHHHHcccccccEEEEEccccccEEccccccccccccccccHHHccccHHHHHHHHHcccccEEEEEccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHccccccccccccccccccccccccccEEcccccccccccEEccccccccHHHEEEEEcccccEEEEEEccccHcccccHHHHHHHHHHHHHHHcccccEEEEEEccccccEEccccccEccccccccccccccccHHHHHHHHHcccccEEEEEccc
Coil and Loop (DISEMBL)
MAPQIDSARRRMTAVANHLvpvissdsnsgfiglnnasmndsyhrihgevpshdvvwriacdesgtefTDIIYEKAVGEGIAkitinrpdrrnafrpHTVKELIRAFndarddssvGVIILTgkgteafcsggdqalrtrdgyadyenfgrlnvLDLQVQIRRLPKPVIAMVHLP
Flexible Loop (DISEMBL)
MAPQIDSARRRMTAVANHLVpvissdsnsgFIGLNNASMNDSYHRIHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIakitinrpdrrnafRPHTVKELIrafndarddssVGVIILtgkgteafcsggdQALRTRDGYADYENFGRlnvldlqvqirrlpkpviamvhlp
Low Complexity Region (SEG)
MAPQIDSARRRMTAVANHLVPVISSDSNSGFIGLNNASMNDSYHRIHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP
Disordered region (IsUnstruct)
**************VANHLVPVIS****SGFIGLNNASMNDSYHRIHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV***
Disordered Region (DISOPRED)
***********MTAVANH********************************PSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR***ADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP
Disordered Region (DISEMBL)
**********RMTAVANHLVPVISSDSNSGFIGLNNASMNDSYHRIHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP
Disordered Region (DISPRO)
******************************************YHRIHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAPQIDSARRRMTAVANHLVPVISSDSNSGFIGLNNASMNDSYHRIHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	175	2.2.26 [Sep-21-2011]
Q8GYN9	337	1,4-Dihydroxy-2-naphthoyl	yes	no	0.965	0.501	0.687	1e-63
Q9CLV5	285	1,4-Dihydroxy-2-naphthoyl	yes	no	0.691	0.424	0.564	7e-31
Q7CQ56	285	1,4-Dihydroxy-2-naphthoyl	yes	no	0.668	0.410	0.570	1e-29
P0ABU0	285	1,4-Dihydroxy-2-naphthoyl	N/A	no	0.668	0.410	0.570	2e-29
P0ABU1	285	1,4-Dihydroxy-2-naphthoyl	yes	no	0.668	0.410	0.570	2e-29
P44960	285	1,4-Dihydroxy-2-naphthoyl	yes	no	0.594	0.364	0.603	1e-28
Q5HQC3	272	1,4-Dihydroxy-2-naphthoyl	yes	no	0.617	0.397	0.6	1e-28
Q4L549	272	1,4-Dihydroxy-2-naphthoyl	yes	no	0.617	0.397	0.6	2e-28
Q8CPQ4	272	1,4-Dihydroxy-2-naphthoyl	yes	no	0.594	0.382	0.613	2e-28
Q49WG8	272	1,4-Dihydroxy-2-naphthoyl	yes	no	0.617	0.397	0.581	2e-28

>sp|Q8GYN9|MENB_ARATH 1,4-Dihydroxy-2-naphthoyl-CoA synthase, peroxisomal OS=Arabidopsis thaliana GN=MENB PE=1 SV=2

 Score =  241 bits (616), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 119/173 (68%), Positives = 143/173 (82%), Gaps = 4/173 (2%)

Query: 4   QIDSARRRMTAVANHLVPVISSDSNSGFIGLNNAS-MNDSYHRIHGEVPSHDVVWR---I 59
           ++ SA RR++ V NHL+P+  S + +  + L +AS M+D +H++HGEVP+H+VVW+    
Sbjct: 6   ELGSASRRLSVVTNHLIPIGFSPARADSVELCSASSMDDRFHKVHGEVPTHEVVWKKTDF 65

Query: 60  ACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVI 119
             +    EF DIIYEKA+ EGIAKITINRP+RRNAFRP TVKEL+RAFNDARDDSSVGVI
Sbjct: 66  FGEGDNKEFVDIIYEKALDEGIAKITINRPERRNAFRPQTVKELMRAFNDARDDSSVGVI 125

Query: 120 ILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           ILTGKGT+AFCSGGDQALRT+DGYAD  + GRLNVLDLQVQIRRLPKPVIAMV
Sbjct: 126 ILTGKGTKAFCSGGDQALRTQDGYADPNDVGRLNVLDLQVQIRRLPKPVIAMV 178

Involved in the biosynthesis of phylloquinone (vitamin K1). Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA).
Arabidopsis thaliana (taxid: 3702)
EC: 4EC: .EC: 1EC: .EC: 3EC: .EC: 3EC: 6

>sp|Q9CLV5|MENB_PASMU 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Pasteurella multocida (strain Pm70) GN=menB PE=3 SV=1

 Score =  133 bits (334), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 70/124 (56%), Positives = 87/124 (70%), Gaps = 3/124 (2%)

Query: 51  PSHDVVWR-IACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFND 109
           P  DV++  I   +    +TDI+Y K++ +GIAKITINRP+ RNAFRP TVKE+I+AF D
Sbjct: 4   PKDDVLYAPIEWQDHSEGYTDILYHKSL-DGIAKITINRPEVRNAFRPQTVKEMIQAFAD 62

Query: 110 ARDDSSVGVIILTGKGTEAFCSGGDQALRT-RDGYADYENFGRLNVLDLQVQIRRLPKPV 168
           AR D  +GVI+LTG+G +AFCSGGDQ +R    GY D      LNVLD Q  IR  PKPV
Sbjct: 63  ARFDEQIGVIVLTGQGEKAFCSGGDQKVRGDYGGYQDESGVHHLNVLDFQRDIRTCPKPV 122

Query: 169 IAMV 172
           +AMV
Sbjct: 123 VAMV 126

Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA).

Pasteurella multocida (strain Pm70) (taxid: 272843)

EC: 4

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

EC: 6

>sp|Q7CQ56|MENB_SALTY 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=menB PE=1 SV=1

 Score =  129 bits (324), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/128 (57%), Positives = 86/128 (67%), Gaps = 11/128 (8%)

Query: 46  IHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIR 105
           ++  V  HD      C E    +TDI YEK+  +GIAKITINRP  RNAFRP TVKE+I+
Sbjct: 9   LYAPVEWHD------CSEG---YTDIRYEKST-DGIAKITINRPQVRNAFRPLTVKEMIQ 58

Query: 106 AFNDARDDSSVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIRRL 164
           A  DAR D +VGVIILTG+G +AFC+GGDQ +R    GY D      LNVLD Q QIR  
Sbjct: 59  ALADARYDDNVGVIILTGEGDKAFCAGGDQKVRGDYGGYQDDSGVHHLNVLDFQRQIRTC 118

Query: 165 PKPVIAMV 172
           PKPV+AMV
Sbjct: 119 PKPVVAMV 126

Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA).

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 4

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

EC: 6

>sp|P0ABU0|MENB_ECOLI 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Escherichia coli (strain K12) GN=menB PE=1 SV=1

 Score =  128 bits (321), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/128 (57%), Positives = 84/128 (65%), Gaps = 11/128 (8%)

Query: 46  IHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIR 105
           ++  V  HD      C E    F DI YEK+  +GIAKITINRP  RNAFRP TVKE+I+
Sbjct: 9   LYAPVEWHD------CSEG---FEDIRYEKST-DGIAKITINRPQVRNAFRPLTVKEMIQ 58

Query: 106 AFNDARDDSSVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIRRL 164
           A  DAR D ++GVIILTG G +AFCSGGDQ +R    GY D      LNVLD Q QIR  
Sbjct: 59  ALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTC 118

Query: 165 PKPVIAMV 172
           PKPV+AMV
Sbjct: 119 PKPVVAMV 126

Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA).

Escherichia coli (strain K12) (taxid: 83333)

EC: 4

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

EC: 6

>sp|P0ABU1|MENB_ECOL6 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=menB PE=3 SV=1

 Score =  128 bits (321), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/128 (57%), Positives = 84/128 (65%), Gaps = 11/128 (8%)

Query: 46  IHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIR 105
           ++  V  HD      C E    F DI YEK+  +GIAKITINRP  RNAFRP TVKE+I+
Sbjct: 9   LYAPVEWHD------CSEG---FEDIRYEKST-DGIAKITINRPQVRNAFRPLTVKEMIQ 58

Query: 106 AFNDARDDSSVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIRRL 164
           A  DAR D ++GVIILTG G +AFCSGGDQ +R    GY D      LNVLD Q QIR  
Sbjct: 59  ALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTC 118

Query: 165 PKPVIAMV 172
           PKPV+AMV
Sbjct: 119 PKPVVAMV 126

Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA).

Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310)

EC: 4

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

EC: 6

>sp|P44960|MENB_HAEIN 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=menB PE=3 SV=1

 Score =  125 bits (315), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/106 (60%), Positives = 79/106 (74%), Gaps = 2/106 (1%)

Query: 68  FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
           ++DI Y K+  +GIAKITINRP+ RNAFRP TVKE++ AF+DAR D ++GVI+LTG+G +
Sbjct: 22  YSDIRYHKST-DGIAKITINRPEVRNAFRPQTVKEMMTAFSDARFDENIGVIVLTGEGEK 80

Query: 128 AFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           AFCSGGDQ +R    GY D      LNVLD Q  IR  PKPV+AMV
Sbjct: 81  AFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRDIRSCPKPVVAMV 126

Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA).

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

EC: 4

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

EC: 6

>sp|Q5HQC3|MENB_STAEQ 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=menB PE=3 SV=1

 Score =  125 bits (314), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/110 (60%), Positives = 80/110 (72%), Gaps = 2/110 (1%)

Query: 63  ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
           E+  E+ +I YE    EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LT
Sbjct: 6   ETLREYDEIKYE--FFEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLT 63

Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           G+G +AFCSGGDQ  R   GY   ++  RLNVLDLQ  IR +PKPVIAMV
Sbjct: 64  GEGDKAFCSGGDQKKRGHGGYVGEDDIPRLNVLDLQRLIRVIPKPVIAMV 113

Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA).

Staphylococcus epidermidis (strain ATCC 35984 / RP62A) (taxid: 176279)

EC: 4

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

EC: 6

>sp|Q4L549|MENB_STAHJ 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=menB PE=3 SV=1

 Score =  125 bits (313), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/110 (60%), Positives = 79/110 (71%), Gaps = 2/110 (1%)

Query: 63  ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
           E+  E+ +I YE    EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD ++ VIILT
Sbjct: 6   ETLREYDEIKYE--FYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNISVIILT 63

Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           G+G +AFCSGGDQ  R   GY   +   RLNVLDLQ  IR +PKPVIAMV
Sbjct: 64  GEGDKAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRVIPKPVIAMV 113

Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA).

Staphylococcus haemolyticus (strain JCSC1435) (taxid: 279808)

EC: 4

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

EC: 6

>sp|Q8CPQ4|MENB_STAES 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=menB PE=3 SV=1

 Score =  125 bits (313), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/106 (61%), Positives = 78/106 (73%), Gaps = 2/106 (1%)

Query: 67  EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
           E+ +I YE    EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LTG+G 
Sbjct: 10  EYDEIKYE--FFEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGD 67

Query: 127 EAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           +AFCSGGDQ  R   GY   ++  RLNVLDLQ  IR +PKPVIAMV
Sbjct: 68  KAFCSGGDQKKRGHGGYVGEDDIPRLNVLDLQRLIRVIPKPVIAMV 113

Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA).

Staphylococcus epidermidis (strain ATCC 12228) (taxid: 176280)

EC: 4

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

EC: 6

>sp|Q49WG8|MENB_STAS1 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=menB PE=3 SV=1

 Score =  125 bits (313), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/110 (58%), Positives = 81/110 (73%), Gaps = 2/110 (1%)

Query: 63  ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
           E+  E+ +I YE  + +GIAK+TINRP+ RNAF P+TV+E+I AF  ARDD  + VIILT
Sbjct: 6   ETIREYKEIKYE--LYDGIAKVTINRPEVRNAFTPNTVQEMIDAFTRARDDQRISVIILT 63

Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           G+G +AFCSGGDQ +R   GY   +   RLNVLDLQ  IR +PKPV+AMV
Sbjct: 64  GEGDKAFCSGGDQKVRGHGGYVGDDQIPRLNVLDLQRLIRVIPKPVVAMV 113

Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA).

Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) (taxid: 342451)

EC: 4

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
225425573	336	PREDICTED: 1,4-Dihydroxy-2-naphthoyl-CoA	0.948	0.494	0.759	2e-69
147771137	336	hypothetical protein VITISV_034257 [Viti	0.948	0.494	0.759	2e-69
307135970	333	naphthoate synthase [Cucumis melo subsp.	0.925	0.486	0.766	6e-67
255568782	335	Naphthoate synthase, putative [Ricinus c	0.965	0.504	0.727	1e-66
449517563	333	PREDICTED: 1,4-Dihydroxy-2-naphthoyl-CoA	0.925	0.486	0.754	5e-66
449434935	333	PREDICTED: 1,4-Dihydroxy-2-naphthoyl-CoA	0.925	0.486	0.748	7e-65
359806589	339	uncharacterized protein LOC100807101 [Gl	0.965	0.498	0.686	6e-63
388495372	184	unknown [Medicago truncatula]	0.92	0.875	0.723	2e-62
259490362	336	uncharacterized protein LOC100304279 [Ze	0.96	0.5	0.689	4e-62
30696431	337	naphthoate synthase [Arabidopsis thalian	0.965	0.501	0.687	7e-62

>gi|225425573|ref|XP_002267500.1| PREDICTED: 1,4-Dihydroxy-2-naphthoyl-CoA synthase, peroxisomal [Vitis vinifera] gi|297739062|emb|CBI28551.3| unnamed protein product [Vitis vinifera]

 Score =  266 bits (681), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 126/166 (75%), Positives = 143/166 (86%)

Query: 7   SARRRMTAVANHLVPVISSDSNSGFIGLNNASMNDSYHRIHGEVPSHDVVWRIACDESGT 66
           +ARRR+ +VA+HL P+ S+  N   +G +  S  DSY R+HGEVP+HDV W  ACDESG 
Sbjct: 12  NARRRLASVAHHLTPLHSTTPNCSSLGFHTTSAPDSYRRVHGEVPTHDVTWNPACDESGK 71

Query: 67  EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
            FTDIIYEKAVGE IAKITINRP+RRNAFRP+TVKELIRAFNDARDDSSVGVII TGKGT
Sbjct: 72  AFTDIIYEKAVGEAIAKITINRPERRNAFRPNTVKELIRAFNDARDDSSVGVIIFTGKGT 131

Query: 127 EAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           +AFCSGGDQA R RDGYAD+++FGRLNVLDLQ+QIRRLPKPVIAMV
Sbjct: 132 KAFCSGGDQAFRGRDGYADHDDFGRLNVLDLQMQIRRLPKPVIAMV 177

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147771137|emb|CAN74179.1| hypothetical protein VITISV_034257 [Vitis vinifera]

 Score =  266 bits (681), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 126/166 (75%), Positives = 143/166 (86%)

Query: 7   SARRRMTAVANHLVPVISSDSNSGFIGLNNASMNDSYHRIHGEVPSHDVVWRIACDESGT 66
           +ARRR+ +VA+HL P+ S+  N   +G +  S  DSY R+HGEVP+HDV W  ACDESG 
Sbjct: 12  NARRRLASVAHHLTPLHSTTPNCSSLGFHTTSAPDSYRRVHGEVPTHDVTWNPACDESGK 71

Query: 67  EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
            FTDIIYEKAVGE IAKITINRP+RRNAFRP+TVKELIRAFNDARDDSSVGVII TGKGT
Sbjct: 72  AFTDIIYEKAVGEAIAKITINRPERRNAFRPNTVKELIRAFNDARDDSSVGVIIFTGKGT 131

Query: 127 EAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           +AFCSGGDQA R RDGYAD+++FGRLNVLDLQ+QIRRLPKPVIAMV
Sbjct: 132 KAFCSGGDQAFRGRDGYADHDDFGRLNVLDLQMQIRRLPKPVIAMV 177

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307135970|gb|ADN33829.1| naphthoate synthase [Cucumis melo subsp. melo]

 Score =  258 bits (659), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 125/163 (76%), Positives = 142/163 (87%), Gaps = 1/163 (0%)

Query: 10  RRMTAVANHLVPVISSDSNSGFIGLNNASMNDSYHRIHGEVPSHDVVWRIACDESGTEFT 69
           RR+ ++++HLVP I    N   I L++AS++DSYHR HG V +H VVW IA DE G EFT
Sbjct: 13  RRVASISSHLVP-IPQTPNPDSIHLSSASIDDSYHRKHGTVSTHPVVWSIAGDEFGKEFT 71

Query: 70  DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAF 129
           DIIYEKAVGE IAKITINRP+RRNAFRP T+KELIRAFNDARDDSS+GVIILTGKGTEAF
Sbjct: 72  DIIYEKAVGEAIAKITINRPERRNAFRPQTIKELIRAFNDARDDSSIGVIILTGKGTEAF 131

Query: 130 CSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           CSGGDQALR +DGY+DY++FGRLNVLDLQVQIRRLPKPVIAMV
Sbjct: 132 CSGGDQALRKKDGYSDYDDFGRLNVLDLQVQIRRLPKPVIAMV 174

Source: Cucumis melo subsp. melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255568782|ref|XP_002525362.1| Naphthoate synthase, putative [Ricinus communis] gi|223535325|gb|EEF37000.1| Naphthoate synthase, putative [Ricinus communis]

 Score =  257 bits (657), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 123/169 (72%), Positives = 143/169 (84%)

Query: 4   QIDSARRRMTAVANHLVPVISSDSNSGFIGLNNASMNDSYHRIHGEVPSHDVVWRIACDE 63
           ++D+  RR+  V NHL PV  S ++S     N +S+++SYHRIHGEV +  V+W+ ACDE
Sbjct: 8   EMDALGRRLATVTNHLNPVAPSSNHSPIDLSNTSSIDNSYHRIHGEVSNEQVIWKNACDE 67

Query: 64  SGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG 123
            G EFTDIIYEKAVGEGIAKITINRP+RRNAFRP TVKE+IRAFNDARDDSS+GVIILTG
Sbjct: 68  YGKEFTDIIYEKAVGEGIAKITINRPERRNAFRPQTVKEMIRAFNDARDDSSIGVIILTG 127

Query: 124 KGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           KGT+AFCSGGDQ+LRT DGYAD  + GRLNVLDLQVQIRRLPKP+IAMV
Sbjct: 128 KGTKAFCSGGDQSLRTADGYADPNDMGRLNVLDLQVQIRRLPKPIIAMV 176

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449517563|ref|XP_004165815.1| PREDICTED: 1,4-Dihydroxy-2-naphthoyl-CoA synthase, peroxisomal-like [Cucumis sativus]

 Score =  255 bits (651), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 123/163 (75%), Positives = 141/163 (86%), Gaps = 1/163 (0%)

Query: 10  RRMTAVANHLVPVISSDSNSGFIGLNNASMNDSYHRIHGEVPSHDVVWRIACDESGTEFT 69
           RR+ ++++HLVP I    N   I L++AS++DSYHR HG V +H VVW  A DE G EFT
Sbjct: 13  RRVASISSHLVP-IPQTPNPDSIHLSSASIDDSYHRKHGTVSTHPVVWSKAGDEFGKEFT 71

Query: 70  DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAF 129
           DIIYEKAVGE IAKITINRP+RRNAFRP T+KELIRAFNDARDDSS+GV+ILTGKGTEAF
Sbjct: 72  DIIYEKAVGEAIAKITINRPERRNAFRPQTIKELIRAFNDARDDSSIGVVILTGKGTEAF 131

Query: 130 CSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           CSGGDQALR +DGY+DY++FGRLNVLDLQVQIRRLPKPVIAMV
Sbjct: 132 CSGGDQALRKKDGYSDYDDFGRLNVLDLQVQIRRLPKPVIAMV 174

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434935|ref|XP_004135251.1| PREDICTED: 1,4-Dihydroxy-2-naphthoyl-CoA synthase, peroxisomal-like [Cucumis sativus]

 Score =  251 bits (641), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 122/163 (74%), Positives = 140/163 (85%), Gaps = 1/163 (0%)

Query: 10  RRMTAVANHLVPVISSDSNSGFIGLNNASMNDSYHRIHGEVPSHDVVWRIACDESGTEFT 69
           RR+ ++++HLVP I    N   I L++AS++DSYHR HG V +  VVW  A DE G EFT
Sbjct: 13  RRVASISSHLVP-IPQTPNPDSIHLSSASIDDSYHRKHGTVSTLPVVWSKAGDEFGKEFT 71

Query: 70  DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAF 129
           DIIYEKAVGE IAKITINRP+RRNAFRP T+KELIRAFNDARDDSS+GV+ILTGKGTEAF
Sbjct: 72  DIIYEKAVGEAIAKITINRPERRNAFRPQTIKELIRAFNDARDDSSIGVVILTGKGTEAF 131

Query: 130 CSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           CSGGDQALR +DGY+DY++FGRLNVLDLQVQIRRLPKPVIAMV
Sbjct: 132 CSGGDQALRKKDGYSDYDDFGRLNVLDLQVQIRRLPKPVIAMV 174

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806589|ref|NP_001241269.1| uncharacterized protein LOC100807101 [Glycine max] gi|255639630|gb|ACU20109.1| unknown [Glycine max]

 Score =  245 bits (625), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 118/172 (68%), Positives = 138/172 (80%), Gaps = 3/172 (1%)

Query: 4   QIDSARRRMTAVANHLVPVISSDSNSGFIGLNNASMNDSYHRIHGEVPSHDVVWRIAC-- 61
            +++A RR+ +V NHL P    ++         +  N+S+ R+HGEVPSHDVVWRI    
Sbjct: 9   HLETATRRLASVTNHLTPSSYHNAPGELAPCLTSGGNNSFRRVHGEVPSHDVVWRIVASD 68

Query: 62  -DESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVII 120
            D SG +FTDI+YEKAVGEGIAKI+INRP+RRNAFRPHTVKEL+RAF DARDDSS+GV+I
Sbjct: 69  HDNSGKDFTDIVYEKAVGEGIAKISINRPERRNAFRPHTVKELMRAFTDARDDSSIGVVI 128

Query: 121 LTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           LTGKGTEAFCSGGDQALRT DGY+D  +F  LNVLDLQVQIRRLPKPVIAMV
Sbjct: 129 LTGKGTEAFCSGGDQALRTNDGYSDNGSFSSLNVLDLQVQIRRLPKPVIAMV 180

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388495372|gb|AFK35752.1| unknown [Medicago truncatula]

 Score =  243 bits (620), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 123/170 (72%), Positives = 142/170 (83%), Gaps = 9/170 (5%)

Query: 5   IDSARRRMTAVANHLVPVISSDSNSGFIGLNNASMNDSYHRIHGEVPSHDVVWRI--ACD 62
           I++  RR+T+V NHLV    S S    I L + S   +Y R+HG+VPSHDVVW++  + D
Sbjct: 7   IETVIRRVTSVTNHLV----SSSPPQLISLCHTS---TYQRVHGDVPSHDVVWKVVPSDD 59

Query: 63  ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
           + G  FTDI+YEK+VGEGIAKI+INRP+RRNAFRPHTVKELIRAFNDARDD SVGVIILT
Sbjct: 60  DEGKVFTDILYEKSVGEGIAKISINRPERRNAFRPHTVKELIRAFNDARDDPSVGVIILT 119

Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           GKGT+AFCSGGDQALRT DGY+D+EN GRLNVLDLQVQIRRLPKPVIAMV
Sbjct: 120 GKGTDAFCSGGDQALRTPDGYSDHENIGRLNVLDLQVQIRRLPKPVIAMV 169

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|259490362|ref|NP_001159194.1| uncharacterized protein LOC100304279 [Zea mays] gi|223942561|gb|ACN25364.1| unknown [Zea mays] gi|414881113|tpg|DAA58244.1| TPA: hypothetical protein ZEAMMB73_624046 [Zea mays]

 Score =  242 bits (618), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 122/177 (68%), Positives = 136/177 (76%), Gaps = 9/177 (5%)

Query: 5   IDSARRRMTAVANHLVPVISSDSNSGFIGLNNASM---------NDSYHRIHGEVPSHDV 55
           +D+A RR+  VA HLVP       +G     + +           DSY R+HG+VPS   
Sbjct: 1   MDAAERRLARVAAHLVPSFPVPHATGPPLAPSPAAASSSSSSPAGDSYRRVHGDVPSEPP 60

Query: 56  VWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSS 115
            WR A DESG EF DIIYEKAVGEGIAKITINRPDRRNAFRP TVKEL+RAFNDARDDSS
Sbjct: 61  EWRTATDESGKEFVDIIYEKAVGEGIAKITINRPDRRNAFRPLTVKELMRAFNDARDDSS 120

Query: 116 VGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           +GVIILTGKGT+AFCSGGDQALR  DGY D+++FGRLNVLDLQVQIRRLPKPVIAMV
Sbjct: 121 IGVIILTGKGTKAFCSGGDQALRDSDGYVDFDSFGRLNVLDLQVQIRRLPKPVIAMV 177

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30696431|ref|NP_176255.2| naphthoate synthase [Arabidopsis thaliana] gi|327488386|sp|Q8GYN9.2|MENB_ARATH RecName: Full=1,4-Dihydroxy-2-naphthoyl-CoA synthase, peroxisomal; Short=DHNS; AltName: Full=Enoyl-CoA hydratase/isomerase D; Short=ECHID; AltName: Full=Naphthoate synthase gi|192571726|gb|ACF04808.1| At1g60550 [Arabidopsis thaliana] gi|332195575|gb|AEE33696.1| naphthoate synthase [Arabidopsis thaliana]

 Score =  241 bits (616), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 119/173 (68%), Positives = 143/173 (82%), Gaps = 4/173 (2%)

Query: 4   QIDSARRRMTAVANHLVPVISSDSNSGFIGLNNAS-MNDSYHRIHGEVPSHDVVWR---I 59
           ++ SA RR++ V NHL+P+  S + +  + L +AS M+D +H++HGEVP+H+VVW+    
Sbjct: 6   ELGSASRRLSVVTNHLIPIGFSPARADSVELCSASSMDDRFHKVHGEVPTHEVVWKKTDF 65

Query: 60  ACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVI 119
             +    EF DIIYEKA+ EGIAKITINRP+RRNAFRP TVKEL+RAFNDARDDSSVGVI
Sbjct: 66  FGEGDNKEFVDIIYEKALDEGIAKITINRPERRNAFRPQTVKELMRAFNDARDDSSVGVI 125

Query: 120 ILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           ILTGKGT+AFCSGGDQALRT+DGYAD  + GRLNVLDLQVQIRRLPKPVIAMV
Sbjct: 126 ILTGKGTKAFCSGGDQALRTQDGYADPNDVGRLNVLDLQVQIRRLPKPVIAMV 178

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
TAIR|locus:2036626	337	ECHID "enoyl-CoA hydratase/iso	0.965	0.501	0.687	9.3e-59
UNIPROTKB|P0ABU0	285	menB [Escherichia coli K-12 (t	0.645	0.396	0.605	1.5e-28
TIGR_CMR|BA_5109	272	BA_5109 "naphthoate synthase"	0.588	0.378	0.638	5e-28
UNIPROTKB|P23966	271	menB "1,4-Dihydroxy-2-naphthoy	0.588	0.380	0.6	4.5e-27
UNIPROTKB|Q9KQM5	296	VC_1973 "Naphthoate synthase"	0.645	0.381	0.588	1.2e-26
TIGR_CMR|VC_1973	296	VC_1973 "naphthoate synthase"	0.645	0.381	0.588	1.2e-26
UNIPROTKB|O06414	314	menB "1,4-Dihydroxy-2-naphthoy	0.657	0.366	0.421	1.3e-20
TIGR_CMR|SO_4739	300	SO_4739 "naphthoate synthase"	0.622	0.363	0.479	2.1e-20
UNIPROTKB|A0QRD3	309	menB "1,4-Dihydroxy-2-naphthoy	0.611	0.346	0.448	1.4e-18
TIGR_CMR|CHY_1293	257	CHY_1293 "3-hydroxybutyryl-CoA	0.577	0.392	0.333	4.4e-10

TAIR|locus:2036626 ECHID "enoyl-CoA hydratase/isomerase D" [Arabidopsis thaliana (taxid:3702)]

 Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
 Identities = 119/173 (68%), Positives = 143/173 (82%)

Query:     4 QIDSARRRMTAVANHLVPVISSDSNSGFIGLNNAS-MNDSYHRIHGEVPSHDVVWR---I 59
             ++ SA RR++ V NHL+P+  S + +  + L +AS M+D +H++HGEVP+H+VVW+    
Sbjct:     6 ELGSASRRLSVVTNHLIPIGFSPARADSVELCSASSMDDRFHKVHGEVPTHEVVWKKTDF 65

Query:    60 ACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVI 119
               +    EF DIIYEKA+ EGIAKITINRP+RRNAFRP TVKEL+RAFNDARDDSSVGVI
Sbjct:    66 FGEGDNKEFVDIIYEKALDEGIAKITINRPERRNAFRPQTVKELMRAFNDARDDSSVGVI 125

Query:   120 ILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
             ILTGKGT+AFCSGGDQALRT+DGYAD  + GRLNVLDLQVQIRRLPKPVIAMV
Sbjct:   126 ILTGKGTKAFCSGGDQALRTQDGYADPNDVGRLNVLDLQVQIRRLPKPVIAMV 178

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0008935 "1,4-dihydroxy-2-naphthoyl-CoA synthase activity" evidence=IEA;ISS

GO:0009234 "menaquinone biosynthetic process" evidence=IEA

GO:0042371 "vitamin K biosynthetic process" evidence=ISS

GO:0005777 "peroxisome" evidence=IDA

UNIPROTKB|P0ABU0 menB [Escherichia coli K-12 (taxid:83333)]

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 72/119 (60%), Positives = 81/119 (68%)

Query:    55 VVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDS 114
             V W   C E    F DI YEK+  +GIAKITINRP  RNAFRP TVKE+I+A  DAR D 
Sbjct:    13 VEWH-DCSEG---FEDIRYEKST-DGIAKITINRPQVRNAFRPLTVKEMIQALADARYDD 67

Query:   115 SVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
             ++GVIILTG G +AFCSGGDQ +R    GY D      LNVLD Q QIR  PKPV+AMV
Sbjct:    68 NIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMV 126

GO:0008935 "1,4-dihydroxy-2-naphthoyl-CoA synthase activity" evidence=IEA;IDA

GO:0071890 "bicarbonate binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009234 "menaquinone biosynthetic process" evidence=IEA;IMP

TIGR_CMR|BA_5109 BA_5109 "naphthoate synthase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 67/105 (63%), Positives = 77/105 (73%)

Query:    68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
             + DIIY  +   GIAKI+INRP+  NAFRP TV ELI AF  ARDD++VGVIILTG+G  
Sbjct:    11 YEDIIY--STYNGIAKISINRPEVHNAFRPKTVMELIDAFAHARDDANVGVIILTGEGGR 68

Query:   128 AFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
             AFCSGGDQ +R   GY   +   RLNVLDLQ  IR +PKPVIAMV
Sbjct:    69 AFCSGGDQKVRGHGGYVGDDQIPRLNVLDLQRLIRAIPKPVIAMV 113

GO:0008935 "1,4-dihydroxy-2-naphthoyl-CoA synthase activity" evidence=ISS

GO:0009234 "menaquinone biosynthetic process" evidence=ISS

UNIPROTKB|P23966 menB "1,4-Dihydroxy-2-naphthoyl-CoA synthase" [Bacillus subtilis subsp. subtilis str. 168 (taxid:224308)]

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 63/105 (60%), Positives = 75/105 (71%)

Query:    68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
             + +I+YE     GIAKITINRP+  NAF P TV E+I AF DARDD +VGVI+L G G +
Sbjct:    10 YDEILYETY--NGIAKITINRPEVHNAFTPKTVAEMIDAFADARDDQNVGVIVLAGAGDK 67

Query:   128 AFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
             AFCSGGDQ +R   GY   +   RLNVLDLQ  IR +PKPV+AMV
Sbjct:    68 AFCSGGDQKVRGHGGYVGDDQIPRLNVLDLQRLIRVIPKPVVAMV 112

GO:0008935 "1,4-dihydroxy-2-naphthoyl-CoA synthase activity" evidence=IDA

GO:0009234 "menaquinone biosynthetic process" evidence=IGC

GO:0071890 "bicarbonate binding" evidence=IDA

UNIPROTKB|Q9KQM5 VC_1973 "Naphthoate synthase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 70/119 (58%), Positives = 80/119 (67%)

Query:    55 VVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDS 114
             V+W+   D +G ++ DI Y K+  +GIAKITI RP  RNAFRP TVKE+I A  DAR D 
Sbjct:    24 VIWQ---DCTG-DYQDIHYHKS-DDGIAKITIARPQVRNAFRPLTVKEMIHALADARYDD 78

Query:   115 SVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
              VGVIILTG G +AFCSGGDQ +R    GY D      LNVLD Q QIR  PKPVIA V
Sbjct:    79 KVGVIILTGLGEDAFCSGGDQKIRGDYGGYRDDSGTHHLNVLDFQRQIRTCPKPVIAAV 137

GO:0008935 "1,4-dihydroxy-2-naphthoyl-CoA synthase activity" evidence=ISS

GO:0009234 "menaquinone biosynthetic process" evidence=ISS

TIGR_CMR|VC_1973 VC_1973 "naphthoate synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 70/119 (58%), Positives = 80/119 (67%)

Query:    55 VVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDS 114
             V+W+   D +G ++ DI Y K+  +GIAKITI RP  RNAFRP TVKE+I A  DAR D 
Sbjct:    24 VIWQ---DCTG-DYQDIHYHKS-DDGIAKITIARPQVRNAFRPLTVKEMIHALADARYDD 78

Query:   115 SVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
              VGVIILTG G +AFCSGGDQ +R    GY D      LNVLD Q QIR  PKPVIA V
Sbjct:    79 KVGVIILTGLGEDAFCSGGDQKIRGDYGGYRDDSGTHHLNVLDFQRQIRTCPKPVIAAV 137

GO:0008935 "1,4-dihydroxy-2-naphthoyl-CoA synthase activity" evidence=ISS

GO:0009234 "menaquinone biosynthetic process" evidence=ISS

UNIPROTKB|O06414 menB "1,4-Dihydroxy-2-naphthoyl-CoA synthase" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
 Identities = 56/133 (42%), Positives = 75/133 (56%)

Query:    57 WRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSV 116
             WR+   +   + TDI Y + V +   ++  NRP+ RNAFRPHTV EL R  + AR    V
Sbjct:    25 WRLV--DGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDV 82

Query:   117 GVIILTGKGTE------AFCSGGDQALRTRDGY----------ADYENFGRLNVLDLQVQ 160
             GV++LTG G        AFCSGGDQ +R R GY           D    GRL++L++Q  
Sbjct:    83 GVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRL 142

Query:   161 IRRLPKPVIAMVH 173
             IR +PK VI +V+
Sbjct:   143 IRFMPKVVICLVN 155

GO:0005886 "plasma membrane" evidence=IDA

GO:0008935 "1,4-dihydroxy-2-naphthoyl-CoA synthase activity" evidence=IDA

GO:0009234 "menaquinone biosynthetic process" evidence=IDA

GO:0034214 "protein hexamerization" evidence=IDA

GO:0051260 "protein homooligomerization" evidence=IPI

TIGR_CMR|SO_4739 SO_4739 "naphthoate synthase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 59/123 (47%), Positives = 72/123 (58%)

Query:    64 SGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG 123
             +G  FTDI Y +A   G  +I INRPD  NAFRP TV EL  A + AR  S VG  +LTG
Sbjct:    18 NGFNFTDITYHRAKAHGTVRIAINRPDCLNAFRPKTVDELYIALDHARQWSDVGCALLTG 77

Query:   124 KGTEA-----FCSGGDQALRTRDGY---------ADYENFGRLNVLDLQVQIRRLPKPVI 169
              G  A     F SGGDQ +R +DGY         AD    GRL++L++Q  IR +PK VI
Sbjct:    78 NGPSAKGQYSFSSGGDQRIRGKDGYKYEGAEEGKADLARMGRLHILEVQRLIRFMPKVVI 137

Query:   170 AMV 172
             A+V
Sbjct:   138 AVV 140

GO:0008935 "1,4-dihydroxy-2-naphthoyl-CoA synthase activity" evidence=ISS

GO:0009234 "menaquinone biosynthetic process" evidence=ISS

UNIPROTKB|A0QRD3 menB "1,4-Dihydroxy-2-naphthoyl-CoA synthase" [Mycobacterium smegmatis str. MC2 155 (taxid:246196)]

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 57/127 (44%), Positives = 74/127 (58%)

Query:    67 EFTDIIYEKAVGEGIAKITI----NRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
             + TDI Y + V +G  + T+    +RP+ RNAFRPHTV EL R  + AR  S VGVI+LT
Sbjct:    24 DLTDITYHRHVLDGARQPTVRVAFDRPEVRNAFRPHTVDELYRVLDHARMSSDVGVILLT 83

Query:   123 GKGTE------AFCSGGDQALRTRDGY----------ADYENFGRLNVLDLQVQIRRLPK 166
             G G        AFCSGGDQ +R R GY           D    GRL++L++Q  IR +PK
Sbjct:    84 GNGPSPKDGGWAFCSGGDQRIRGRTGYQYASGETAETVDPARAGRLHILEVQRLIRFMPK 143

Query:   167 PVIAMVH 173
              VI +V+
Sbjct:   144 VVICLVN 150

GO:0008935 "1,4-dihydroxy-2-naphthoyl-CoA synthase activity" evidence=ISS;IDA

GO:0009234 "menaquinone biosynthetic process" evidence=ISS

TIGR_CMR|CHY_1293 CHY_1293 "3-hydroxybutyryl-CoA dehydratase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 146 (56.5 bits), Expect = 4.4e-10, P = 4.4e-10
 Identities = 34/102 (33%), Positives = 56/102 (54%)

Query:    72 IYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCS 131
             + E    EGIA +TINR +  NA     + EL +  +  ++D+S+ V+I+TG G +AF +
Sbjct:     3 VIEMVREEGIAILTINRANVLNALNTEVLLELKKVLSQIKEDTSIKVVIITGAGEKAFVA 62

Query:   132 GGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
             G D +   +    +   + RL   ++   I  LP+PVIA V+
Sbjct:    63 GADISEMVKQSVDEGYRYSRLGQ-EVLALIENLPQPVIAAVN 103

GO:0003859 "3-hydroxybutyryl-CoA dehydratase activity" evidence=ISS

GO:0019626 "short-chain fatty acid catabolic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	175
PLN02921	327	PLN02921, PLN02921, naphthoate synthase	2e-97
PRK07396	273	PRK07396, PRK07396, dihydroxynaphthoic acid synthe	2e-63
COG0447	282	COG0447, MenB, Dihydroxynaphthoic acid synthase [C	4e-52
TIGR01929	259	TIGR01929, menB, naphthoate synthase (dihydroxynap	5e-47
PRK08321	302	PRK08321, PRK08321, naphthoate synthase; Validated	4e-40
TIGR03210	256	TIGR03210, badI, 2-ketocyclohexanecarboxyl-CoA hyd	2e-27
cd06558	195	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme	6e-26
pfam00378	245	pfam00378, ECH, Enoyl-CoA hydratase/isomerase fami	2e-22
COG1024	257	COG1024, CaiD, Enoyl-CoA hydratase/carnithine race	5e-22
PRK05995	262	PRK05995, PRK05995, enoyl-CoA hydratase; Provision	1e-19
PRK06688	259	PRK06688, PRK06688, enoyl-CoA hydratase; Provision	9e-18
PRK08260	296	PRK08260, PRK08260, enoyl-CoA hydratase; Provision	1e-15
PRK08139	266	PRK08139, PRK08139, enoyl-CoA hydratase; Validated	2e-14
PRK08290	288	PRK08290, PRK08290, enoyl-CoA hydratase; Provision	2e-14
PRK05809	260	PRK05809, PRK05809, 3-hydroxybutyryl-CoA dehydrata	4e-14
PRK06210	272	PRK06210, PRK06210, enoyl-CoA hydratase; Provision	2e-13
PRK07511	260	PRK07511, PRK07511, enoyl-CoA hydratase; Provision	1e-12
PRK06494	259	PRK06494, PRK06494, enoyl-CoA hydratase; Provision	2e-12
PRK08140	262	PRK08140, PRK08140, enoyl-CoA hydratase; Provision	3e-12
PRK08272	302	PRK08272, PRK08272, enoyl-CoA hydratase; Provision	5e-12
PRK09120	275	PRK09120, PRK09120, p-hydroxycinnamoyl CoA hydrata	6e-12
PRK06144	262	PRK06144, PRK06144, enoyl-CoA hydratase; Provision	6e-12
PRK07468	262	PRK07468, PRK07468, enoyl-CoA hydratase; Provision	7e-12
PLN02888	265	PLN02888, PLN02888, enoyl-CoA hydratase	1e-11
PRK07657	260	PRK07657, PRK07657, enoyl-CoA hydratase; Provision	1e-11
PRK06142	272	PRK06142, PRK06142, enoyl-CoA hydratase; Provision	3e-11
PRK05870	249	PRK05870, PRK05870, enoyl-CoA hydratase; Provision	8e-11
PRK07854	243	PRK07854, PRK07854, enoyl-CoA hydratase; Provision	9e-11
PRK08258	277	PRK08258, PRK08258, enoyl-CoA hydratase; Provision	9e-11
PRK07827	260	PRK07827, PRK07827, enoyl-CoA hydratase; Provision	1e-10
PRK06127	269	PRK06127, PRK06127, enoyl-CoA hydratase; Provision	1e-10
PRK09245	266	PRK09245, PRK09245, enoyl-CoA hydratase; Provision	2e-10
PRK05980	260	PRK05980, PRK05980, enoyl-CoA hydratase; Provision	2e-10
PRK07110	249	PRK07110, PRK07110, polyketide biosynthesis enoyl-	5e-10
PRK07509	262	PRK07509, PRK07509, enoyl-CoA hydratase; Provision	5e-10
PRK07260	255	PRK07260, PRK07260, enoyl-CoA hydratase; Provision	6e-10
PRK06190	258	PRK06190, PRK06190, enoyl-CoA hydratase; Provision	7e-10
TIGR03200	360	TIGR03200, dearomat_oah, 6-oxocyclohex-1-ene-1-car	2e-09
PRK05617	342	PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrol	2e-09
PRK05864	276	PRK05864, PRK05864, enoyl-CoA hydratase; Provision	2e-09
PRK08138	261	PRK08138, PRK08138, enoyl-CoA hydratase; Provision	7e-09
PRK07658	257	PRK07658, PRK07658, enoyl-CoA hydratase; Provision	1e-08
PRK06072	248	PRK06072, PRK06072, enoyl-CoA hydratase; Provision	2e-08
PRK07327	268	PRK07327, PRK07327, enoyl-CoA hydratase; Provision	2e-08
PRK05674	265	PRK05674, PRK05674, gamma-carboxygeranoyl-CoA hydr	2e-08
TIGR02280	256	TIGR02280, PaaB1, phenylacetate degradation probab	2e-08
PRK07799	263	PRK07799, PRK07799, enoyl-CoA hydratase; Provision	3e-08
PRK03580	261	PRK03580, PRK03580, carnitinyl-CoA dehydratase; Pr	4e-08
PRK07659	260	PRK07659, PRK07659, enoyl-CoA hydratase; Provision	6e-08
PRK12478	298	PRK12478, PRK12478, enoyl-CoA hydratase; Provision	7e-08
PRK08259	254	PRK08259, PRK08259, enoyl-CoA hydratase; Provision	9e-08
PLN02988	381	PLN02988, PLN02988, 3-hydroxyisobutyryl-CoA hydrol	2e-07
PRK05862	257	PRK05862, PRK05862, enoyl-CoA hydratase; Provision	3e-07
PLN02664	275	PLN02664, PLN02664, enoyl-CoA hydratase/delta3,5-d	4e-07
PRK08150	255	PRK08150, PRK08150, enoyl-CoA hydratase; Provision	5e-07
PRK05981	266	PRK05981, PRK05981, enoyl-CoA hydratase; Provision	5e-07
PRK08252	254	PRK08252, PRK08252, enoyl-CoA hydratase; Provision	7e-07
PRK06495	257	PRK06495, PRK06495, enoyl-CoA hydratase; Provision	1e-06
PRK06563	255	PRK06563, PRK06563, enoyl-CoA hydratase; Provision	2e-06
PRK11423	261	PRK11423, PRK11423, methylmalonyl-CoA decarboxylas	2e-06
PRK09674	255	PRK09674, PRK09674, enoyl-CoA hydratase-isomerase;	4e-06
PRK11154	708	PRK11154, fadJ, multifunctional fatty acid oxidati	2e-05
PLN02157	401	PLN02157, PLN02157, 3-hydroxyisobutyryl-CoA hydrol	3e-05
PLN02874	379	PLN02874, PLN02874, 3-hydroxyisobutyryl-CoA hydrol	6e-05
PRK07938	249	PRK07938, PRK07938, enoyl-CoA hydratase; Provision	1e-04
PLN02600	251	PLN02600, PLN02600, enoyl-CoA hydratase	1e-04
PLN02851	407	PLN02851, PLN02851, 3-hydroxyisobutyryl-CoA hydrol	2e-04
TIGR02437	714	TIGR02437, FadB, fatty oxidation complex, alpha su	0.004

>gnl|CDD|178509 PLN02921, PLN02921, naphthoate synthase

 Score =  284 bits (728), Expect = 2e-97
 Identities = 120/167 (71%), Positives = 135/167 (80%)

Query: 6   DSARRRMTAVANHLVPVISSDSNSGFIGLNNASMNDSYHRIHGEVPSHDVVWRIACDESG 65
           D+ARRR+  VANHLVP  +  S +     +  +  DSY R+HG+V S  VVWR   D SG
Sbjct: 2   DAARRRLARVANHLVPSANPASMAAARSSSATAPPDSYRRVHGDVSSEPVVWRKVPDGSG 61

Query: 66  TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
            EFTDIIYEKAVGEGIAKITINRP+RRNAFRP TVKEL RAFNDARDDSSVGVIILTGKG
Sbjct: 62  KEFTDIIYEKAVGEGIAKITINRPERRNAFRPRTVKELQRAFNDARDDSSVGVIILTGKG 121

Query: 126 TEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           T+AFCSGGDQA+R +DGY   ++ GRLNVLDLQ+QIRRLPKPVIAMV
Sbjct: 122 TKAFCSGGDQAVRGKDGYVGPDDAGRLNVLDLQIQIRRLPKPVIAMV 168

Length = 327

>gnl|CDD|180958 PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated

 Score =  196 bits (500), Expect = 2e-63
 Identities = 71/106 (66%), Positives = 82/106 (77%), Gaps = 2/106 (1%)

Query: 67  EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
           E+ DI+Y+ A  +GIAKITINRP+ RNAFRP TVKE+I AF DARDD ++GVIILTG G 
Sbjct: 11  EYEDILYKSA--DGIAKITINRPEVRNAFRPKTVKEMIDAFADARDDDNIGVIILTGAGD 68

Query: 127 EAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           +AFCSGGDQ +R   GY D +   RLNVLDLQ  IR  PKPVIAMV
Sbjct: 69  KAFCSGGDQKVRGYGGYVDDDGVPRLNVLDLQRLIRTCPKPVIAMV 114

Length = 273

>gnl|CDD|223524 COG0447, MenB, Dihydroxynaphthoic acid synthase [Coenzyme metabolism]

 Score =  167 bits (424), Expect = 4e-52
 Identities = 71/109 (65%), Positives = 81/109 (74%), Gaps = 4/109 (3%)

Query: 67  EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGK-- 124
            + DI YEK+V  GIAKITINRP+ RNAFRP TV E+I AF DARDD +VGVI+LTG   
Sbjct: 16  GYEDITYEKSVD-GIAKITINRPEVRNAFRPKTVDEMIDAFADARDDPNVGVILLTGNGD 74

Query: 125 GTEAFCSGGDQALRTRD-GYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           G +AFCSGGDQ +R    GY D +   RLNVLDLQ  IR +PKPVIAMV
Sbjct: 75  GDKAFCSGGDQKVRGDSGGYVDDDGIPRLNVLDLQRLIRTMPKPVIAMV 123

Length = 282

>gnl|CDD|200143 TIGR01929, menB, naphthoate synthase (dihydroxynaphthoic acid synthetase)

 Score =  153 bits (389), Expect = 5e-47
 Identities = 69/105 (65%), Positives = 80/105 (76%), Gaps = 1/105 (0%)

Query: 68  FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
           F DI YEK+  +GIAKITINRP  RNAFRP TVKE+I+A +DAR+D  +GV+ILTG G +
Sbjct: 1   FEDIRYEKST-DGIAKITINRPQVRNAFRPLTVKEIIQALDDAREDPDIGVVILTGAGDK 59

Query: 128 AFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           AFCSGGDQ +R   GY D     RLNVLD+Q QIR  PKPVIAMV
Sbjct: 60  AFCSGGDQKVRGDYGYIDDSGVHRLNVLDVQRQIRTCPKPVIAMV 104

This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 259

>gnl|CDD|181386 PRK08321, PRK08321, naphthoate synthase; Validated

 Score =  137 bits (346), Expect = 4e-40
 Identities = 60/125 (48%), Positives = 76/125 (60%), Gaps = 16/125 (12%)

Query: 64  SGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG 123
            G +FTDI Y +AV +G  +I  +RP+ RNAFRPHTV EL RA + AR    VG ++LTG
Sbjct: 18  PGFDFTDITYHRAVDQGTVRIAFDRPEVRNAFRPHTVDELYRALDHARMSPDVGCVLLTG 77

Query: 124 KGTE------AFCSGGDQALRTRDGY----------ADYENFGRLNVLDLQVQIRRLPKP 167
            G        AFCSGGDQ +R RDGY           D    GRL++L++Q  IR +PK 
Sbjct: 78  NGPSPKDGGWAFCSGGDQRIRGRDGYQYAEGDEADTVDPARAGRLHILEVQRLIRFMPKV 137

Query: 168 VIAMV 172
           VIA+V
Sbjct: 138 VIAVV 142

Length = 302

>gnl|CDD|132254 TIGR03210, badI, 2-ketocyclohexanecarboxyl-CoA hydrolase

 Score =  103 bits (257), Expect = 2e-27
 Identities = 53/106 (50%), Positives = 64/106 (60%), Gaps = 4/106 (3%)

Query: 68  FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
           + DI+YEK    GIA I INRP + NAFR  T  ELI A  DA  D  +GVI+L G G +
Sbjct: 1   YEDILYEKR--NGIAWIMINRPAKMNAFRGQTCDELIHALKDAGYDRQIGVIVLAGAGDK 58

Query: 128 AFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           AFC+GGDQ+  T DG  D      L + +L   IR +PKPVIA V 
Sbjct: 59  AFCTGGDQS--THDGGYDGRGTIGLPMEELHSAIRDVPKPVIARVQ 102

Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen. Length = 256

>gnl|CDD|119339 cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily

 Score = 97.6 bits (244), Expect = 6e-26
 Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 4/104 (3%)

Query: 71  IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFC 130
           ++ E+    G+A IT+NRP++RNA     + EL  A ++A  D  V V++LTG G +AFC
Sbjct: 1   VLVER--DGGVATITLNRPEKRNALSLEMLDELAAALDEAEADPDVRVVVLTGAG-KAFC 57

Query: 131 SGGD-QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           +G D + L       +        + +L   + RLPKPVIA V+
Sbjct: 58  AGADLKELAALSDAGEEARAFIRELQELLRALLRLPKPVIAAVN 101

This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole. Length = 195

>gnl|CDD|201191 pfam00378, ECH, Enoyl-CoA hydratase/isomerase family

 Score = 90.0 bits (224), Expect = 2e-22
 Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 77  VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
           +  G+A I ++RP+  NA     + ELI+A      D SV  I+LTG    AF +G D  
Sbjct: 4   LEAGVAVIKLDRPEAVNALSAELLTELIQALEKLEQDPSVKAIVLTGGP-GAFSAGADIK 62

Query: 137 LRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
               +  A    F  L   DL  ++  LPKPVIA V
Sbjct: 63  EMAAEPLAQQAQF-SLEAQDLWSRLEDLPKPVIAAV 97

This family contains a diverse set of enzymes including: Enoyl-CoA hydratase. Napthoate synthase. Carnitate racemase. 3-hydoxybutyryl-CoA dehydratase. Dodecanoyl-CoA delta-isomerase. Length = 245

>gnl|CDD|223955 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]

 Score = 89.0 bits (221), Expect = 5e-22
 Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 5/109 (4%)

Query: 66  TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
           T +  I+ E    +GIA IT+NRP++ NA     + EL  A ++A  D  V V++LTG G
Sbjct: 2   TTYETILVE--REDGIAVITLNRPEKLNALNLEMLDELAEALDEAEADPDVRVVVLTGAG 59

Query: 126 TEAFCSGGD-QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
             AF +G D + L + +     EN  +     L+  +  LPKPVIA V+
Sbjct: 60  K-AFSAGADLKELLSPEDGNAAENLMQPGQDLLR-ALADLPKPVIAAVN 106

Length = 257

>gnl|CDD|235664 PRK05995, PRK05995, enoyl-CoA hydratase; Provisional

 Score = 82.7 bits (205), Expect = 1e-19
 Identities = 42/100 (42%), Positives = 54/100 (54%), Gaps = 3/100 (3%)

Query: 76  AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD- 134
                +A +T+NRPD RNAF    + EL  AF     D SV  ++L G G +AFC+G D 
Sbjct: 9   EQRGQVATVTLNRPDVRNAFNETVIAELTAAFRALDADDSVRAVVLAGAG-KAFCAGADL 67

Query: 135 QALRTRDGYADYENFGRLNVL-DLQVQIRRLPKPVIAMVH 173
             ++   GY+D EN      L D+   I R PKPVIA VH
Sbjct: 68  NWMKKMAGYSDDENRADARRLADMLRAIYRCPKPVIARVH 107

Length = 262

>gnl|CDD|235852 PRK06688, PRK06688, enoyl-CoA hydratase; Provisional

 Score = 77.6 bits (192), Expect = 9e-18
 Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 15/110 (13%)

Query: 69  TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEA 128
           TD++ E    +G+  ITINRPD++NA      + L  A   A  D +V V++LTG G  A
Sbjct: 5   TDLLVELE--DGVLTITINRPDKKNALTAAMYQALADALEAAATDPAVRVVVLTGAG-RA 61

Query: 129 FCSGGDQALRTRDGYADYENFGRLNVLDLQV-----QIRRLPKPVIAMVH 173
           F +GGD            +   +       V      I  LPKPV+A V+
Sbjct: 62  FSAGGDIK-------DFPKAPPKPPDELAPVNRFLRAIAALPKPVVAAVN 104

Length = 259

>gnl|CDD|236206 PRK08260, PRK08260, enoyl-CoA hydratase; Provisional

 Score = 72.0 bits (177), Expect = 1e-15
 Identities = 43/127 (33%), Positives = 59/127 (46%), Gaps = 29/127 (22%)

Query: 67  EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
            +  I Y+  V +GIA IT+NRPD+ NAF     +ELI AF+ A  D +V  +I+TG G 
Sbjct: 2   TYETIRYD--VADGIATITLNRPDKLNAFTVTMARELIEAFDAADADDAVRAVIVTGAG- 58

Query: 127 EAFCSGGD---------------QALRTRDGYADY------ENFGRLNVLDLQVQIRRLP 165
            AFC+G D                     +  AD       +  GR+      ++I    
Sbjct: 59  RAFCAGADLSAGGNTFDLDAPRTPVEADEEDRADPSDDGVRDGGGRVT-----LRIFDSL 113

Query: 166 KPVIAMV 172
           KPVIA V
Sbjct: 114 KPVIAAV 120

Length = 296

>gnl|CDD|181249 PRK08139, PRK08139, enoyl-CoA hydratase; Validated

 Score = 68.8 bits (169), Expect = 2e-14
 Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 9/98 (9%)

Query: 80  GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD----Q 135
           G+A +T+NRP   NA     +  L  A +    D SV V++L   G +AFC+G D    +
Sbjct: 20  GVATLTLNRPQAFNALSEAMLAALQAALDAIAADPSVRVVVLAAAG-KAFCAGHDLKEMR 78

Query: 136 ALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           A R    +     F R +   +   I  LP+PVIA VH
Sbjct: 79  AARGLAYFRAL--FARCS--RVMQAIVALPQPVIARVH 112

Length = 266

>gnl|CDD|236220 PRK08290, PRK08290, enoyl-CoA hydratase; Provisional

 Score = 68.8 bits (169), Expect = 2e-14
 Identities = 43/129 (33%), Positives = 58/129 (44%), Gaps = 24/129 (18%)

Query: 66  TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
            E+  + YE  V   IA+IT+NRP+ RNA     + EL  AF  A  D +V VI+L G G
Sbjct: 1   MEYEYVRYE--VAGRIARITLNRPEARNAQNRQMLYELDAAFRRAEADDAVRVIVLAGAG 58

Query: 126 TEAFCSGGD----QALRTRDGYAD------YENFGRLNV-----------LDLQVQIRRL 164
            + F +G D       R RD   D      ++   +  V           L +  + R L
Sbjct: 59  -KHFSAGHDLGSGTPGRDRDPGPDQHPTLWWDGATKPGVEQRYAREWEVYLGMCRRWRDL 117

Query: 165 PKPVIAMVH 173
           PKP IA V 
Sbjct: 118 PKPTIAQVQ 126

Length = 288

>gnl|CDD|180270 PRK05809, PRK05809, 3-hydroxybutyryl-CoA dehydratase; Validated

 Score = 67.8 bits (166), Expect = 4e-14
 Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 7/108 (6%)

Query: 67  EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
           E  ++I EK     IA +TINRP   NA    T+KEL    +D  +D +V  +ILTG G 
Sbjct: 2   ELKNVILEKE--GHIAVVTINRPKALNALNSETLKELDTVLDDIENDDNVYAVILTGAGE 59

Query: 127 EAFCSGGDQALRTRDGYADYENFGRLNVLDLQV--QIRRLPKPVIAMV 172
           +AF +G D +        +   FG   +L  +V  ++  L KPVIA +
Sbjct: 60  KAFVAGADISEMKDLNEEEGRKFG---LLGNKVFRKLENLDKPVIAAI 104

Length = 260

>gnl|CDD|180472 PRK06210, PRK06210, enoyl-CoA hydratase; Provisional

 Score = 65.9 bits (161), Expect = 2e-13
 Identities = 43/119 (36%), Positives = 57/119 (47%), Gaps = 19/119 (15%)

Query: 67  EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
            +  ++YE A   G+A IT+NRPDR NA+ P    E+  A + A  D +V VI+LTG G 
Sbjct: 3   AYDAVLYEVA-DSGVAVITLNRPDRLNAWTPVMEAEVYAAMDRAEADPAVRVIVLTGAG- 60

Query: 127 EAFCSGGD-QALRTRDGYADYENFGRLNVLDLQVQIRR------------LPKPVIAMV 172
             FC+G D   L+T D         R   +   V  RR            L KPVIA +
Sbjct: 61  RGFCAGADMGELQTIDPSDG----RRDTDVRPFVGNRRPDYQTRYHFLTALRKPVIAAI 115

Length = 272

>gnl|CDD|181009 PRK07511, PRK07511, enoyl-CoA hydratase; Provisional

 Score = 63.9 bits (156), Expect = 1e-12
 Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 7/93 (7%)

Query: 84  ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD----QALRT 139
           +T++ P  RNA  P      I A N A  D S+  ++LTG G   FC+GG+       R 
Sbjct: 16  LTLSNPGARNALHPDMYAAGIEALNTAERDPSIRAVVLTGAG-GFFCAGGNLNRLLENRA 74

Query: 140 RDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           +       +   L+  D    IR  PKPVIA V
Sbjct: 75  KPPSVQAASIDGLH--DWIRAIRAFPKPVIAAV 105

Length = 260

>gnl|CDD|180591 PRK06494, PRK06494, enoyl-CoA hydratase; Provisional

 Score = 63.1 bits (154), Expect = 2e-12
 Identities = 33/99 (33%), Positives = 43/99 (43%), Gaps = 14/99 (14%)

Query: 79  EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD---Q 135
             +  +T+NRP+  NA       EL   F+D   D    V I+TG G +AF +G D   Q
Sbjct: 12  GHVTIVTLNRPEVMNALHLDAHFELEEVFDDFAADPEQWVAIVTGAGDKAFSAGNDLKEQ 71

Query: 136 ALRTRDGYADYENFGRLNVLDLQVQIRR--LPKPVIAMV 172
           A   + G      FG L          R  L KP+IA V
Sbjct: 72  AAGGKRG-WPESGFGGLT--------SRFDLDKPIIAAV 101

Length = 259

>gnl|CDD|236163 PRK08140, PRK08140, enoyl-CoA hydratase; Provisional

 Score = 62.6 bits (153), Expect = 3e-12
 Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 9/102 (8%)

Query: 76  AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQ 135
           A+  G+A +T+NRPD+ N+F     +EL  A +   DD     ++LTG G   FC+G D 
Sbjct: 9   AIEAGVATLTLNRPDKLNSFTREMHRELREALDQVEDD-GARALLLTGAG-RGFCAGQDL 66

Query: 136 ALRTRDGYADYENFGRLNVLD-----LQVQIRRLPKPVIAMV 172
           A R         + G    ++     L  ++R LP PVIA V
Sbjct: 67  ADRDVTPGGAMPDLG--ESIETFYNPLVRRLRALPLPVIAAV 106

Length = 262

>gnl|CDD|236213 PRK08272, PRK08272, enoyl-CoA hydratase; Provisional

 Score = 62.0 bits (151), Expect = 5e-12
 Identities = 38/132 (28%), Positives = 54/132 (40%), Gaps = 27/132 (20%)

Query: 66  TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
                + YE  V   IA+IT+NRP++ NA    T  EL  A   A  D  V VI+++G G
Sbjct: 7   DNLKTMTYE--VTGRIARITLNRPEKGNAITADTPLELRAAVERADLDPGVHVILVSGAG 64

Query: 126 TEAFCSGGD------QALRTRDGYADYENFGRLN---------VLDLQVQIR-------- 162
            + FC+G D       +     G A       +N         ++D Q+  R        
Sbjct: 65  -KGFCAGYDLSAYAEGSSSGGGGGAYPGKRQAVNHLPDDPWDPMIDYQMMSRFVRGFMSL 123

Query: 163 -RLPKPVIAMVH 173
               KP +A VH
Sbjct: 124 WHAHKPTVAKVH 135

Length = 302

>gnl|CDD|236383 PRK09120, PRK09120, p-hydroxycinnamoyl CoA hydratase/lyase; Validated

 Score = 61.6 bits (150), Expect = 6e-12
 Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 20/107 (18%)

Query: 77  VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
           V +GIA +T+NRP++RNA  P   +E+I   +    D   GV++LTG G +A+ +G D  
Sbjct: 14  VEDGIAWVTLNRPEKRNAMSPTLNREMIDVLDALEFDDDAGVLVLTGAG-DAWSAGMDLK 72

Query: 137 LRTRDGYADYENFGRLNVLDLQVQIRR-----------LPKPVIAMV 172
              R+  A  E         LQ +IRR             KP IAMV
Sbjct: 73  EYFRETDAQPE--------ILQERIRREAYGWWRRLRWYQKPTIAMV 111

Length = 275

>gnl|CDD|180424 PRK06144, PRK06144, enoyl-CoA hydratase; Provisional

 Score = 61.5 bits (150), Expect = 6e-12
 Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 10/112 (8%)

Query: 66  TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
           T   +++ E  V  GIA+IT NRP  RNA      + L         D S+  ++L G G
Sbjct: 5   TSTDELLLE--VRGGIARITFNRPAARNAMTWAMYEGLAEICEAIAADPSIRAVVLRGAG 62

Query: 126 TEAFCSGGD----QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
            +AF +G D    +A  T +    YE      VL     + +L  P IA + 
Sbjct: 63  DKAFVAGTDIAQFRAFSTAEDAVAYERRID-RVLGA---LEQLRVPTIAAIA 110

Length = 262

>gnl|CDD|180987 PRK07468, PRK07468, enoyl-CoA hydratase; Provisional

 Score = 61.6 bits (150), Expect = 7e-12
 Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 7/98 (7%)

Query: 80  GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD----Q 135
           G+A +T+NRP++ NA     + EL  A      D++V V++LTG G ++FC+GGD    +
Sbjct: 14  GVATLTLNRPEKHNALSARMIAELTTAARRLAADAAVRVVVLTGAG-KSFCAGGDLGWMR 72

Query: 136 ALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           A  T D     E   RL ++ L+  +  LPKP+I  + 
Sbjct: 73  AQMTADRATRIEEARRLAMM-LKA-LNDLPKPLIGRIQ 108

Length = 262

>gnl|CDD|215480 PLN02888, PLN02888, enoyl-CoA hydratase

 Score = 61.3 bits (149), Expect = 1e-11
 Identities = 31/55 (56%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 80  GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD 134
           GIA ITINRP   NA     + EL  AF    +D SV VIILTG G  AFCSG D
Sbjct: 19  GIATITINRPKALNALTRPMMVELAAAFKRLDEDDSVKVIILTGSG-RAFCSGVD 72

Length = 265

>gnl|CDD|181069 PRK07657, PRK07657, enoyl-CoA hydratase; Provisional

 Score = 60.5 bits (147), Expect = 1e-11
 Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 7/95 (7%)

Query: 79  EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR 138
             + KIT+NRP   NA     ++EL        ++++V V+ILTG G +AFC+G D  L+
Sbjct: 12  PHVVKITLNRPRAANALSLALLEELQNILTQINEEANVRVVILTGAGEKAFCAGAD--LK 69

Query: 139 TRDGYADYENFGRLNVLDLQ---VQIRRLPKPVIA 170
            R G  + +   R  V  ++     + +LP+PVIA
Sbjct: 70  ERAGMNEEQ--VRHAVSLIRTTMEMVEQLPQPVIA 102

Length = 260

>gnl|CDD|235714 PRK06142, PRK06142, enoyl-CoA hydratase; Provisional

 Score = 59.6 bits (145), Expect = 3e-11
 Identities = 34/121 (28%), Positives = 47/121 (38%), Gaps = 15/121 (12%)

Query: 64  SGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG 123
             T +     E A  + +A++T+NRP + NA  P    EL   F     D  V  ++L+G
Sbjct: 1   MMTTYESFTVELA--DHVAQVTLNRPGKGNAMNPAFWSELPEIFRWLDADPEVRAVVLSG 58

Query: 124 KGTEAFCSGGD--------QALRTRDGYADYENFGRLNVLDLQVQIR---RLPKPVIAMV 172
            G + F  G D          L          +  R  +L LQ  I       KPVIA V
Sbjct: 59  SG-KHFSYGIDLPAMAGVFGQLGKDGLARPRTDLRRE-ILRLQAAINAVADCRKPVIAAV 116

Query: 173 H 173
            
Sbjct: 117 Q 117

Length = 272

>gnl|CDD|180298 PRK05870, PRK05870, enoyl-CoA hydratase; Provisional

 Score = 58.6 bits (142), Expect = 8e-11
 Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 4/101 (3%)

Query: 73  YEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSG 132
               V +G+A IT+N PDRRNA       +L  A   A  D  V  +++TG G  AFC+G
Sbjct: 5   VLLDVDDGVALITVNDPDRRNAVTAEMSAQLRAAVAAAEADPDVHALVVTGAGK-AFCAG 63

Query: 133 GD-QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
            D  AL    G    +   R  + D  + +   P P IA V
Sbjct: 64  ADLTALGAAPGRPAEDGLRR--IYDGFLAVASCPLPTIAAV 102

Length = 249

>gnl|CDD|236115 PRK07854, PRK07854, enoyl-CoA hydratase; Provisional

 Score = 58.1 bits (141), Expect = 9e-11
 Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 8/97 (8%)

Query: 79  EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR 138
             +  I + RP+RRNA      +EL  A   A  D S   I+LTG+GT  FC+G D +  
Sbjct: 8   GQVLTIELQRPERRNALNAELCEELREAVRKA-VDESARAIVLTGQGT-VFCAGADLS-- 63

Query: 139 TRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP 175
             D YAD  +F    ++++   I   P PVIA ++ P
Sbjct: 64  -GDVYAD--DFPD-ALIEMLHAIDAAPVPVIAAINGP 96

Length = 243

>gnl|CDD|181329 PRK08258, PRK08258, enoyl-CoA hydratase; Provisional

 Score = 58.4 bits (142), Expect = 9e-11
 Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 14/106 (13%)

Query: 76  AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD- 134
            V +G+A IT+NRP+R+N     +  EL   F +      V  ++LTG G   FCSGGD 
Sbjct: 22  EVDDGVATITLNRPERKNPLTFESYAELRDLFRELVYADDVKAVVLTGAG-GNFCSGGDV 80

Query: 135 -------QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
                    +   +  A    F R+   DL   +R  P+P+IA V 
Sbjct: 81  HEIIGPLTKMDMPELLA----FTRMTG-DLVKAMRACPQPIIAAVD 121

Length = 277

>gnl|CDD|236109 PRK07827, PRK07827, enoyl-CoA hydratase; Provisional

 Score = 58.2 bits (141), Expect = 1e-10
 Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 3/99 (3%)

Query: 76  AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD- 134
           AV  G+A +T++ P  RNA     V +L      A  D +V  ++LT  G   FC+G D 
Sbjct: 11  AVDGGVATLTLDSPHNRNALSARLVAQLHDGLRAAAADPAVRAVVLTHTGG-TFCAGADL 69

Query: 135 -QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
            +A        D        +  L   I  LPKPVIA +
Sbjct: 70  SEAGGGGGDPYDAAVARAREMTALLRAIVELPKPVIAAI 108

Length = 260

>gnl|CDD|235705 PRK06127, PRK06127, enoyl-CoA hydratase; Provisional

 Score = 57.8 bits (140), Expect = 1e-10
 Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 11/107 (10%)

Query: 71  IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFC 130
           ++ EK    G+ +IT N P R NA      + L +A   A DD ++ V++LTG G +AF 
Sbjct: 13  LLAEKT--GGLGRITFNNPARHNAMSLDMWEALPQALAAAEDDDAIRVVVLTGAGEKAFV 70

Query: 131 SGGD----QALR-TRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           SG D    +  R   +  A YE      V   Q  +    KP IA +
Sbjct: 71  SGADISQFEESRSDAEAVAAYEQ----AVEAAQAALADYAKPTIACI 113

Length = 269

>gnl|CDD|181723 PRK09245, PRK09245, enoyl-CoA hydratase; Provisional

 Score = 57.7 bits (140), Expect = 2e-10
 Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 5/74 (6%)

Query: 71  IIYEKAVGEGIAKITINRPDRRNAF-RPHTVKELIRAFNDARDDSSVGVIILTGKGTEAF 129
           ++ E+     I  +T+NRP+ RNA      V  L+ A      D SV  +ILTG GT AF
Sbjct: 5   LLVERD--GHIVTLTMNRPETRNALSDNDAVDALVAACAAINADRSVRAVILTGAGT-AF 61

Query: 130 CSGGD-QALRTRDG 142
            SGG+ + +R R G
Sbjct: 62  SSGGNVKDMRARVG 75

Length = 266

>gnl|CDD|180335 PRK05980, PRK05980, enoyl-CoA hydratase; Provisional

 Score = 57.5 bits (139), Expect = 2e-10
 Identities = 35/96 (36%), Positives = 46/96 (47%), Gaps = 3/96 (3%)

Query: 80  GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRT 139
           GIA +T+NRP++ NA     +  L+   +    D SV  +ILTG G  AF +G D    +
Sbjct: 12  GIALLTLNRPEKLNALNYALIDRLLARLDAIEVDESVRAVILTGAGDRAFSAGADIHEFS 71

Query: 140 RDGYADYENFGRLNVLDLQVQIRRL---PKPVIAMV 172
               A  +   R  V   Q    RL   PKPVIA V
Sbjct: 72  ASVAAGADVALRDFVRRGQAMTARLEAFPKPVIAAV 107

Length = 260

>gnl|CDD|235936 PRK07110, PRK07110, polyketide biosynthesis enoyl-CoA hydratase; Validated

 Score = 56.1 bits (136), Expect = 5e-10
 Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 9/104 (8%)

Query: 69  TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEA 128
             ++  + V EGIA++T+     +NAF      +L  AF+    D    V+ILTG     
Sbjct: 3   MKVVELREVEEGIAQVTMQDRVNKNAFSDELCDQLHEAFDTIAQDPRYKVVILTGYPN-Y 61

Query: 129 FCSGGDQA--LRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIA 170
           F +GG Q   L  + G       G     +L       P PVIA
Sbjct: 62  FATGGTQEGLLSLQTGK------GTFTEANLYSLALNCPIPVIA 99

Length = 249

>gnl|CDD|181008 PRK07509, PRK07509, enoyl-CoA hydratase; Provisional

 Score = 56.4 bits (137), Expect = 5e-10
 Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 9/102 (8%)

Query: 79  EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA-L 137
           +GIA + +NRPD+ NA      +ELI      + D  +  +IL+G+G  AFC+G D   +
Sbjct: 11  DGIADVRLNRPDKMNALDFAMFEELIATIKRLKKDRGIRAVILSGEGG-AFCAGLDVKSV 69

Query: 138 RTRDGYADYENFGRL----NVLDLQVQI--RRLPKPVIAMVH 173
            +  G A    F RL    N L  +V +  RRLP PVIA + 
Sbjct: 70  ASSPGNAVKLLFKRLPGNAN-LAQRVSLGWRRLPVPVIAALE 110

Length = 262

>gnl|CDD|180910 PRK07260, PRK07260, enoyl-CoA hydratase; Provisional

 Score = 55.9 bits (135), Expect = 6e-10
 Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 8/106 (7%)

Query: 68  FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
           F  IIYE  V + +A +T+NRP+  N F     +E++ A   A +D SV  +++   G +
Sbjct: 1   FEHIIYE--VEDDLATLTLNRPEVSNGFNIPMCQEILEALRLAEEDPSVRFLLINANG-K 57

Query: 128 AFCSGGD----QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVI 169
            F  GGD    +     D          L V ++   I++LPKPVI
Sbjct: 58  VFSVGGDLVEMKRAVDEDDVQSLVKIAEL-VNEISFAIKQLPKPVI 102

Length = 255

>gnl|CDD|235733 PRK06190, PRK06190, enoyl-CoA hydratase; Provisional

 Score = 55.8 bits (135), Expect = 7e-10
 Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 4/91 (4%)

Query: 79  EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR 138
           + +  +T+NRP+ RNA      + L  A  +A  D  V V++LTG    AFC+G D    
Sbjct: 12  DRVRTLTLNRPEARNALSAALRRALFAALAEADADDDVDVVVLTGAD-PAFCAGLDLKEL 70

Query: 139 TRDGYADYENFGRLNVLDLQVQIRRLPKPVI 169
             DG A        N          + KPVI
Sbjct: 71  GGDGSAYGAQDALPNPS---PAWPAMRKPVI 98

Length = 258

>gnl|CDD|132244 TIGR03200, dearomat_oah, 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase

 Score = 55.3 bits (133), Expect = 2e-09
 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 15/95 (15%)

Query: 62  DESGTEFTDIIYEK--------AVGEGI--AKITINRPDRRNAFRPHTVKELIRAFNDAR 111
           +   T    ++YEK         V  G+  A I ++ P + N++    VK +I AF  A 
Sbjct: 9   EHPETVCPGVLYEKRPAKRPDGNVVPGLYNAWIILDNPKQYNSYTTDMVKAIILAFRRAS 68

Query: 112 DDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADY 146
            D  V  ++ T  G +AFC+GG+        YA+Y
Sbjct: 69  SDRDVVAVVFTAVGDKAFCTGGNTK-----EYAEY 98

Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 360

>gnl|CDD|235533 PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional

 Score = 54.8 bits (133), Expect = 2e-09
 Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 15/109 (13%)

Query: 70  DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAF 129
           +++ E   G G+  IT+NRP   NA     ++ +  A +   DD +V  +++ G G   F
Sbjct: 4   EVLAEVEGGVGV--ITLNRPKALNALSLEMIRAIDAALDAWEDDDAVAAVVIEGAGERGF 61

Query: 130 CSGGD-----QALRTRDGYADYENFG---RLNVLDLQVQIRRLPKPVIA 170
           C+GGD     +A R  D  A    F    RLN L     I R PKP IA
Sbjct: 62  CAGGDIRALYEAARAGDPLAADRFFREEYRLNAL-----IARYPKPYIA 105

Length = 342

>gnl|CDD|168278 PRK05864, PRK05864, enoyl-CoA hydratase; Provisional

 Score = 54.5 bits (131), Expect = 2e-09
 Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 15/106 (14%)

Query: 80  GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR- 138
            IA IT+NRP+R N+     +  L  A  +   D+SV V++LTG G   F SG D     
Sbjct: 19  EIALITLNRPERMNSMAFDVMVPLKEALAEVSYDNSVRVVVLTGAG-RGFSSGADHKSAG 77

Query: 139 --------TRDGYADYENFGRLNVLD-LQVQIRRLPKPVIAMVHLP 175
                   TR  YA       + +LD + + +RRL +PVIA V+ P
Sbjct: 78  VVPHVEGLTRPTYA----LRSMELLDDVILALRRLHQPVIAAVNGP 119

Length = 276

>gnl|CDD|236162 PRK08138, PRK08138, enoyl-CoA hydratase; Provisional

 Score = 53.1 bits (128), Expect = 7e-09
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 4/94 (4%)

Query: 79  EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR 138
           +G+A + +NRP+ RNA      ++L   F +  +D  +  I+LTG G + F +G D  ++
Sbjct: 16  DGVALLRLNRPEARNALNMEVRQQLAEHFTELSEDPDIRAIVLTG-GEKVFAAGAD--IK 72

Query: 139 TRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
                   E + R +       I + PKPVIA V
Sbjct: 73  EFATAGAIEMYLR-HTERYWEAIAQCPKPVIAAV 105

Length = 261

>gnl|CDD|181070 PRK07658, PRK07658, enoyl-CoA hydratase; Provisional

 Score = 52.7 bits (127), Expect = 1e-08
 Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 6/100 (6%)

Query: 76  AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQ 135
            V + +A IT+N P   NA     + EL    +    D +V V+++ G+G   F +G D 
Sbjct: 7   RVEDHVAVITLNHPPA-NALSSQVLHELSELLDQVEKDDNVRVVVIHGEG-RFFSAGAD- 63

Query: 136 ALRTRDGYADYENFGRLNVLDLQV--QIRRLPKPVIAMVH 173
            ++      + E    L  L      ++ +  KPVIA +H
Sbjct: 64  -IKEFTSVTEAEQATELAQLGQVTFERVEKFSKPVIAAIH 102

Length = 257

>gnl|CDD|168377 PRK06072, PRK06072, enoyl-CoA hydratase; Provisional

 Score = 52.1 bits (125), Expect = 2e-08
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 79  EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR 138
           EG A +T++RPD+ NA       E I        D  + V+I+TG+G  AFC G D +  
Sbjct: 8   EGYAIVTMSRPDKLNALNLEMRNEFISKLKQINADPKIRVVIVTGEG-RAFCVGADLSEF 66

Query: 139 TRDGYADYEN 148
             D   D   
Sbjct: 67  APDFAIDLRE 76

Length = 248

>gnl|CDD|235991 PRK07327, PRK07327, enoyl-CoA hydratase; Provisional

 Score = 51.9 bits (125), Expect = 2e-08
 Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 8/102 (7%)

Query: 78  GEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQAL 137
             G+ +I +N P   NA      +EL   + D   D  V V+++ G+G +AF +GGD AL
Sbjct: 19  PPGVLEIVLNGPGALNAADARMHRELADIWRDVDRDPDVRVVLIRGEG-KAFSAGGDLAL 77

Query: 138 RTRDGYADYENFGRLNVL----DLQVQIRRLPKPVIAMVHLP 175
              +   D+E   R  V     DL   +    KP+++ +H P
Sbjct: 78  -VEEMADDFE--VRARVWREARDLVYNVINCDKPIVSAIHGP 116

Length = 268

>gnl|CDD|168168 PRK05674, PRK05674, gamma-carboxygeranoyl-CoA hydratase; Validated

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)

Query: 66  TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
           ++F  I   +    G A + ++R D+ NAF    ++ELI A +  + D+S+  ++L G+G
Sbjct: 2   SDFQTIELIRD-PRGFATLWLSRADKNNAFNAQMIRELILALDQVQSDASLRFLLLRGRG 60

Query: 126 TEAFCSGGDQALRTRDGYADYE-NFGRLNVL-DLQVQIRRLPKPVIAMV 172
              F +G D A   +    DY  N      L +L   + RL  P +A+V
Sbjct: 61  RH-FSAGADLAWMQQSADLDYNTNLDDARELAELMYNLYRLKIPTLAVV 108

Length = 265

>gnl|CDD|131333 TIGR02280, PaaB1, phenylacetate degradation probable enoyl-CoA hydratase paaB

 Score = 51.8 bits (124), Expect = 2e-08
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 4/100 (4%)

Query: 76  AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQ 135
           A+  G+A++T+NRPD+ N+F      EL  A      D     ++LTG G   FC+G D 
Sbjct: 4   ALEAGVARLTLNRPDKLNSFTAEMHLELREALERVERD-DARALMLTGAG-RGFCAGQDL 61

Query: 136 ALR--TRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           + R  T  G  D           L  ++R LP PV+  V+
Sbjct: 62  SERNPTPGGAPDLGRTIETFYNPLVRRLRALPLPVVCAVN 101

This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE). Length = 256

>gnl|CDD|181122 PRK07799, PRK07799, enoyl-CoA hydratase; Provisional

 Score = 51.3 bits (123), Expect = 3e-08
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 3/94 (3%)

Query: 84  ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY 143
           +T+NRP+ RNA     ++ ++ A++   +D  +   ILTG G  AFC+G D    T+   
Sbjct: 18  VTMNRPEARNALSTEMLRIMVDAWDRVDNDPDIRSCILTGAGG-AFCAGMDLKAATKKPP 76

Query: 144 ADYENFGRLNVLDLQVQI--RRLPKPVIAMVHLP 175
            D    G  +   +   +  RRL KP+IA V  P
Sbjct: 77  GDSFKDGSYDPSRIDALLKGRRLTKPLIAAVEGP 110

Length = 263

>gnl|CDD|179599 PRK03580, PRK03580, carnitinyl-CoA dehydratase; Provisional

 Score = 50.8 bits (122), Expect = 4e-08
 Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 5/94 (5%)

Query: 80  GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-QALR 138
            I +IT++RP + NA    T   +   F + RDD  + V I+TG G + F +G D +A  
Sbjct: 12  SILEITLDRP-KANAIDAKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAA- 69

Query: 139 TRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
             +G A   +FG      L  +I  L KPVIA V
Sbjct: 70  -AEGEAPDADFGPGGFAGLT-EIFDLDKPVIAAV 101

Length = 261

>gnl|CDD|236073 PRK07659, PRK07659, enoyl-CoA hydratase; Provisional

 Score = 50.4 bits (121), Expect = 6e-08
 Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 12/114 (10%)

Query: 66  TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
           ++   ++ +      +A I +NRP+  NA     +KEL++A      +SS  +++L G G
Sbjct: 3   SKMESVVVKYE--GRVATIMLNRPEALNALDEPMLKELLQAL-KEVAESSAHIVVLRGNG 59

Query: 126 TEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQI----RRLPKPVIAMVHLP 175
              F +GGD  +       D   F    V++   +I      +PK  I+ +H P
Sbjct: 60  -RGFSAGGDIKMMLSSN--DESKFDG--VMNTISEIVVTLYTMPKLTISAIHGP 108

Length = 260

>gnl|CDD|183548 PRK12478, PRK12478, enoyl-CoA hydratase; Provisional

 Score = 50.3 bits (120), Expect = 7e-08
 Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 17/122 (13%)

Query: 66  TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
            +F  ++Y  A    +A IT+NRP++ N   P    E+  A   A  D  + VI+L G G
Sbjct: 2   PDFQTLLYTTA--GPVATITLNRPEQLNTIVPPMPDEIEAAIGLAERDQDIKVIVLRGAG 59

Query: 126 TEAFCSGGD---------QALRTRDGYADYENFGRLNVLDLQ-----VQIRRLPKPVIAM 171
             AF  G D         +A+ T   +   ++F  +   +       + I R  KPVIA 
Sbjct: 60  -RAFSGGYDFGGGFQHWGEAMMTDGRWDPGKDFAMVTARETGPTQKFMAIWRASKPVIAQ 118

Query: 172 VH 173
           VH
Sbjct: 119 VH 120

Length = 298

>gnl|CDD|236205 PRK08259, PRK08259, enoyl-CoA hydratase; Provisional

 Score = 49.9 bits (120), Expect = 9e-08
 Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 22/102 (21%)

Query: 80  GIAKITINRPDRRNAFRPHTVKELIRAFN--DARDDSSVGVIILTGKGTEAFCSGGD-QA 136
            +  + +NRP+ RNA    T   L  AF   DA D +SV V  L G G   FC+G D +A
Sbjct: 12  PVTTVILNRPEVRNAVDGPTAAALADAFRAFDADDAASVAV--LWGAG-GTFCAGADLKA 68

Query: 137 LRTRDGYADYENFGRLNVLDLQ------VQIRRLPKPVIAMV 172
           + T          GR N L             RL KPVIA V
Sbjct: 69  VGT----------GRGNRLHPSGDGPMGPSRMRLSKPVIAAV 100

Length = 254

>gnl|CDD|178568 PLN02988, PLN02988, 3-hydroxyisobutyryl-CoA hydrolase

 Score = 49.3 bits (117), Expect = 2e-07
 Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 84  ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRD 141
           +T+NRP + NA   H +  L++ F    +D SV ++IL G G  AFC+GGD A   RD
Sbjct: 22  LTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHG-RAFCAGGDVAAVVRD 78

Length = 381

>gnl|CDD|180295 PRK05862, PRK05862, enoyl-CoA hydratase; Provisional

 Score = 48.5 bits (116), Expect = 3e-07
 Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 16/95 (16%)

Query: 84  ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD----QALRT 139
           IT+NRP   NA     + EL  A      D  +G I++TG   +AF +G D      L  
Sbjct: 17  ITLNRPKALNALNDALMDELGAALAAFDADEGIGAIVITGS-EKAFAAGADIKEMADLSF 75

Query: 140 RDGY-ADY-ENFGRLNVLDLQVQIRRLPKPVIAMV 172
            D Y  DY  N+ +         + R+ KPVIA V
Sbjct: 76  MDVYKGDYITNWEK---------VARIRKPVIAAV 101

Length = 257

>gnl|CDD|178269 PLN02664, PLN02664, enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase

 Score = 48.0 bits (114), Expect = 4e-07
 Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 11/112 (9%)

Query: 72  IYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCS 131
           I +K+    +  + +NRP +RNA       E  +A +    + +V VIIL+G G + FCS
Sbjct: 9   IIQKSPNSSVFHLNLNRPSQRNALSLDFFTEFPKALSSLDQNPNVSVIILSGAG-DHFCS 67

Query: 132 GGD----QALRTRDGYADYENFG---RLNVLDLQ---VQIRRLPKPVIAMVH 173
           G D     ++  +    D    G   R  +  LQ     I +  KPVIA +H
Sbjct: 68  GIDLKTLNSISEQSSSGDRGRSGERLRRKIKFLQDAITAIEQCRKPVIAAIH 119

Length = 275

>gnl|CDD|181254 PRK08150, PRK08150, enoyl-CoA hydratase; Provisional

 Score = 47.7 bits (114), Expect = 5e-07
 Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 20/104 (19%)

Query: 78  GEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA- 136
             G+A I +NRP +RNA     +  L  AF    +   V  ++L G+G + FC+G D + 
Sbjct: 9   DGGVATIGLNRPAKRNALNDGLIAALRAAFARLPEG--VRAVVLHGEG-DHFCAGLDLSE 65

Query: 137 LRTRDGYAD-------YENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           LR RD           +  F +         I+    PVIA +H
Sbjct: 66  LRERDAGEGMHHSRRWHRVFDK---------IQYGRVPVIAALH 100

Length = 255

>gnl|CDD|235661 PRK05981, PRK05981, enoyl-CoA hydratase; Provisional

 Score = 47.8 bits (114), Expect = 5e-07
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 7/102 (6%)

Query: 80  GIAKITINRPDRRNAFRPHTVKELIRAFNDARDD-SSVGVIILTGKGTEAFCSGGDQALR 138
           G+A +T++ P+  NA     +  L  A +   D  + V  ++LTG G   FC+G +   R
Sbjct: 13  GVAILTLDHPEVMNAVSIDMLGGLAEALDAIEDGKAEVRCLVLTGAG-RGFCTGANLQGR 71

Query: 139 TRDGYADYENFGRLNVLD-----LQVQIRRLPKPVIAMVHLP 175
              G            L+        ++R LP P++  V+ P
Sbjct: 72  GSGGRESDSGGDAGAALETAYHPFLRRLRNLPCPIVTAVNGP 113

Length = 266

>gnl|CDD|181325 PRK08252, PRK08252, enoyl-CoA hydratase; Provisional

 Score = 47.3 bits (113), Expect = 7e-07
 Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 5/58 (8%)

Query: 79  EGIAKITINRPDRRNAFRPHTVKELIRAFN--DARDDSSVGVIILTGKGTEAFCSGGD 134
             +  ITINRP+ RNA      + L  A +  DA  D SVG  ILTG G   FC+G D
Sbjct: 11  GRVLIITINRPEARNAVNAAVAQGLAAALDELDADPDLSVG--ILTGAGG-TFCAGMD 65

Length = 254

>gnl|CDD|168580 PRK06495, PRK06495, enoyl-CoA hydratase; Provisional

 Score = 47.0 bits (112), Expect = 1e-06
 Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 9/104 (8%)

Query: 76  AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQ 135
            V + +A +T++ P   NA       ELI  F++  +   V V++LTG G + FC+G D 
Sbjct: 9   EVSDHVAVVTLDNPPV-NALSRELRDELIAVFDEISERPDVRVVVLTGAG-KVFCAGAD- 65

Query: 136 ALRTR----DGYADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP 175
            L+ R     G  D     R    +    IR   KPVIA V+ P
Sbjct: 66  -LKGRPDVIKGPGDLRAHNRR-TRECFHAIRECAKPVIAAVNGP 107

Length = 257

>gnl|CDD|180625 PRK06563, PRK06563, enoyl-CoA hydratase; Provisional

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 24/103 (23%), Positives = 37/103 (35%), Gaps = 21/103 (20%)

Query: 81  IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSG-------- 132
           +  I ++RP +RNAF    + +L  A  +   D  + V +L   G E F +G        
Sbjct: 9   VLLIGLDRPAKRNAFDSAMLDDLALALGEYEADDELRVAVLFAHG-EHFTAGLDLADVAP 67

Query: 133 --GDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
                     +G  D                RRL KP++  V 
Sbjct: 68  KLAAGGFPFPEGGID----------PWGTVGRRLSKPLVVAVQ 100

Length = 255

>gnl|CDD|236908 PRK11423, PRK11423, methylmalonyl-CoA decarboxylase; Provisional

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 14/99 (14%)

Query: 81  IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-----Q 135
           IA IT N P +RNA     + +L++A +D        VI+    G++ + +G D      
Sbjct: 14  IATITFNNPAKRNALSKVLIDDLMQALSDLNRPEIRVVILRAPSGSKVWSAGHDIHELPS 73

Query: 136 ALRTRDGYAD-YENFGRLNVLDLQVQIRRLPKPVIAMVH 173
             R    Y D      R         I++ PKPVIAMV 
Sbjct: 74  GGRDPLSYDDPLRQILR--------MIQKFPKPVIAMVE 104

Length = 261

>gnl|CDD|182026 PRK09674, PRK09674, enoyl-CoA hydratase-isomerase; Provisional

 Score = 45.1 bits (107), Expect = 4e-06
 Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 12/101 (11%)

Query: 76  AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQ 135
           +  + +  +T+NRP+ RNA     + +L+     A  D+S+GV ++TG     F +G D 
Sbjct: 7   SRQQRVLLLTLNRPEARNALNNALLTQLVNELEAAATDTSIGVCVITGNA-RFFAAGAD- 64

Query: 136 ALRTRDGYADYENFGRLNVLDLQVQ----IRRLPKPVIAMV 172
            L      A+ +    LN  D + Q    ++   KP+IA V
Sbjct: 65  -LNE---MAEKDLAATLN--DPRPQLWQRLQAFNKPLIAAV 99

Length = 255

>gnl|CDD|236864 PRK11154, fadJ, multifunctional fatty acid oxidation complex subunit alpha; Reviewed

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 15/103 (14%)

Query: 79  EGIAKITINRPDRR-NAFRPHTVKELIRAFNDARDDSSV-GVIILTGKGTEAFCSGGD-- 134
           + IA ITI+ P  + N  +    +++       R+D  + GV+ ++GK  + F +G D  
Sbjct: 14  DNIAVITIDVPGEKMNTLKAEFAEQVRAILKQLREDKELKGVVFISGK-PDNFIAGADIN 72

Query: 135 --QALRTRDGYADYENFGRL--NVLDLQVQIRRLPKPVIAMVH 173
              A +T     + E   R    +     +I  LP PV+A +H
Sbjct: 73  MLAACKTA---QEAEALARQGQQLFA---EIEALPIPVVAAIH 109

Length = 708

>gnl|CDD|177817 PLN02157, PLN02157, 3-hydroxyisobutyryl-CoA hydrolase-like protein

 Score = 42.7 bits (100), Expect = 3e-05
 Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 11/97 (11%)

Query: 54  DVVWRIACDESGTEFT----DIIYEKAV-GEGIAKITI-NRPDRRNAFRPHTVKELIRAF 107
           D +WR     S         D+ Y+  V G G ++  I NRP   NA   H    L + +
Sbjct: 14  DKLWRFGYRRSFCSLKLTPEDLDYQVLVEGSGCSRTAILNRPPALNALTTHMGYRLQKLY 73

Query: 108 NDARDDSSVGVIILTGKGTEAFCSGGDQA----LRTR 140
            +  +D ++G +++ G G  AFC+GGD      LR R
Sbjct: 74  KNWEEDPNIGFVMMKGSG-RAFCAGGDIVSLYHLRKR 109

Length = 401

>gnl|CDD|178462 PLN02874, PLN02874, 3-hydroxyisobutyryl-CoA hydrolase-like protein

 Score = 42.1 bits (99), Expect = 6e-05
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 84  ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD 134
           IT+NRP + N      V  L         D SV +II+ G G  AF +GGD
Sbjct: 24  ITLNRPRQLNVISLSVVSLLAEFLEQWEKDDSVELIIIKGAG-RAFSAGGD 73

Length = 379

>gnl|CDD|181174 PRK07938, PRK07938, enoyl-CoA hydratase; Provisional

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 20/111 (18%)

Query: 72  IYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCS 131
           I       GIA++T++ P   NA        L  A   A  D    V++L  +G   F +
Sbjct: 3   ITSTTPEPGIAEVTVDYPPV-NALPSAGWFALADAITAAGADPDTRVVVLRAEG-RGFNA 60

Query: 132 GGD-QALRTRDGYA--------DYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           G D + L+   G+          +  F           +     PVIA VH
Sbjct: 61  GVDIKELQATPGFTALIDANRGCFAAFR---------AVYECAVPVIAAVH 102

Length = 249

>gnl|CDD|178210 PLN02600, PLN02600, enoyl-CoA hydratase

 Score = 40.9 bits (96), Expect = 1e-04
 Identities = 17/55 (30%), Positives = 30/55 (54%)

Query: 80  GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD 134
           GI ++ ++RP+ +NA     ++ L  AF   + D+S  V++L       FC+G D
Sbjct: 4   GIVELRLDRPEAKNAIGKEMLRGLRSAFEKIQADASARVVMLRSSVPGVFCAGAD 58

Length = 251

>gnl|CDD|178443 PLN02851, PLN02851, 3-hydroxyisobutyryl-CoA hydrolase-like protein

 Score = 40.7 bits (95), Expect = 2e-04
 Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 13/96 (13%)

Query: 51  PSHDVVW-RIACDESGTEFT--------DIIYEKAVGEGIAK---ITINRPDRRNAFRPH 98
            +  + W R      G  F+        D + ++ + EG AK     +NRP   NA    
Sbjct: 10  VAVPLQWVRFGSVSYGRSFSALPNYAANDDLQDQVLVEGRAKSRAAILNRPSSLNALTIP 69

Query: 99  TVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD 134
            V  L R +    ++  +G +++ G G  AFCSG D
Sbjct: 70  MVARLKRLYESWEENPDIGFVLMKGSG-RAFCSGAD 104

Length = 407

>gnl|CDD|131490 TIGR02437, FadB, fatty oxidation complex, alpha subunit FadB

 Score = 36.7 bits (85), Expect = 0.004
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 70  DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAF 129
             I   A+ +GIA++  + P   N F   T+  L +A +  +  SS+  +ILT  G +AF
Sbjct: 6   KTIQVTALEDGIAELKFDAPGSVNKFDRATLASLDQALDAIKAQSSLKGVILT-SGKDAF 64

Query: 130 CSGGD 134
             G D
Sbjct: 65  IVGAD 69

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399 [Fatty acid and phospholipid metabolism, Degradation]. Length = 714

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	175
PLN02921	327	naphthoate synthase	100.0
COG0447	282	MenB Dihydroxynaphthoic acid synthase [Coenzyme me	99.9
PRK07396	273	dihydroxynaphthoic acid synthetase; Validated	99.9
PRK06143	256	enoyl-CoA hydratase; Provisional	99.9
PRK05809	260	3-hydroxybutyryl-CoA dehydratase; Validated	99.9
PRK06144	262	enoyl-CoA hydratase; Provisional	99.9
TIGR03210	256	badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Memb	99.9
PRK05674	265	gamma-carboxygeranoyl-CoA hydratase; Validated	99.9
PRK05995	262	enoyl-CoA hydratase; Provisional	99.9
COG1024	257	CaiD Enoyl-CoA hydratase/carnithine racemase [Lipi	99.9
PRK06142	272	enoyl-CoA hydratase; Provisional	99.9
TIGR01929	259	menB naphthoate synthase (dihydroxynaphthoic acid	99.9
PRK09120	275	p-hydroxycinnamoyl CoA hydratase/lyase; Validated	99.9
PRK05870	249	enoyl-CoA hydratase; Provisional	99.9
PRK08139	266	enoyl-CoA hydratase; Validated	99.9
PRK05981	266	enoyl-CoA hydratase; Provisional	99.89
PRK05980	260	enoyl-CoA hydratase; Provisional	99.89
PRK12478	298	enoyl-CoA hydratase; Provisional	99.89
PRK07468	262	enoyl-CoA hydratase; Provisional	99.89
PRK05862	257	enoyl-CoA hydratase; Provisional	99.89
PRK06190	258	enoyl-CoA hydratase; Provisional	99.89
PRK07657	260	enoyl-CoA hydratase; Provisional	99.89
PRK08140	262	enoyl-CoA hydratase; Provisional	99.89
PRK07327	268	enoyl-CoA hydratase; Provisional	99.89
PRK05864	276	enoyl-CoA hydratase; Provisional	99.89
PRK08290	288	enoyl-CoA hydratase; Provisional	99.89
PRK06495	257	enoyl-CoA hydratase; Provisional	99.89
PLN02851	407	3-hydroxyisobutyryl-CoA hydrolase-like protein	99.89
PRK08272	302	enoyl-CoA hydratase; Provisional	99.89
PRK06563	255	enoyl-CoA hydratase; Provisional	99.89
PRK06127	269	enoyl-CoA hydratase; Provisional	99.89
PRK09674	255	enoyl-CoA hydratase-isomerase; Provisional	99.89
PRK06210	272	enoyl-CoA hydratase; Provisional	99.89
PRK09076	258	enoyl-CoA hydratase; Provisional	99.89
PRK07260	255	enoyl-CoA hydratase; Provisional	99.89
PRK07659	260	enoyl-CoA hydratase; Provisional	99.89
PRK07799	263	enoyl-CoA hydratase; Provisional	99.89
PRK07658	257	enoyl-CoA hydratase; Provisional	99.89
PRK07827	260	enoyl-CoA hydratase; Provisional	99.89
PLN02664	275	enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA	99.89
PLN02600	251	enoyl-CoA hydratase	99.89
PRK06072	248	enoyl-CoA hydratase; Provisional	99.88
PRK08260	296	enoyl-CoA hydratase; Provisional	99.88
PRK08258	277	enoyl-CoA hydratase; Provisional	99.88
PRK07509	262	enoyl-CoA hydratase; Provisional	99.88
KOG1680	290	consensus Enoyl-CoA hydratase [Lipid transport and	99.88
PRK08138	261	enoyl-CoA hydratase; Provisional	99.88
PRK11423	261	methylmalonyl-CoA decarboxylase; Provisional	99.88
PRK06023	251	enoyl-CoA hydratase; Provisional	99.88
PRK06688	259	enoyl-CoA hydratase; Provisional	99.88
PRK06494	259	enoyl-CoA hydratase; Provisional	99.88
PRK09245	266	enoyl-CoA hydratase; Provisional	99.88
PRK08150	255	enoyl-CoA hydratase; Provisional	99.88
PRK05869	222	enoyl-CoA hydratase; Validated	99.88
PRK08321	302	naphthoate synthase; Validated	99.88
TIGR02280	256	PaaB1 phenylacetate degradation probable enoyl-CoA	99.88
PRK07511	260	enoyl-CoA hydratase; Provisional	99.88
PLN02157	401	3-hydroxyisobutyryl-CoA hydrolase-like protein	99.88
PRK07938	249	enoyl-CoA hydratase; Provisional	99.88
PRK07110	249	polyketide biosynthesis enoyl-CoA hydratase; Valid	99.87
PLN02888	265	enoyl-CoA hydratase	99.87
PLN02874	379	3-hydroxyisobutyryl-CoA hydrolase-like protein	99.87
PRK07112	255	polyketide biosynthesis enoyl-CoA hydratase; Valid	99.87
PRK05617	342	3-hydroxyisobutyryl-CoA hydrolase; Provisional	99.87
TIGR03189	251	dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hy	99.87
PRK08259	254	enoyl-CoA hydratase; Provisional	99.87
PRK03580	261	carnitinyl-CoA dehydratase; Provisional	99.86
PLN02988	381	3-hydroxyisobutyryl-CoA hydrolase	99.86
PRK08252	254	enoyl-CoA hydratase; Provisional	99.86
PRK07854	243	enoyl-CoA hydratase; Provisional	99.86
KOG1681	292	consensus Enoyl-CoA isomerase [Lipid transport and	99.85
PF00378	245	ECH: Enoyl-CoA hydratase/isomerase family; InterPr	99.85
PLN03214	278	probable enoyl-CoA hydratase/isomerase; Provisiona	99.85
PRK08788	287	enoyl-CoA hydratase; Validated	99.84
PLN02267	239	enoyl-CoA hydratase/isomerase family protein	99.84
TIGR03200	360	dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hy	99.83
PRK06213	229	enoyl-CoA hydratase; Provisional	99.83
PRK11730	715	fadB multifunctional fatty acid oxidation complex	99.83
cd06558	195	crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hy	99.82
TIGR03222	546	benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the p	99.81
TIGR03222	546	benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the p	99.81
PRK11154	708	fadJ multifunctional fatty acid oxidation complex	99.81
TIGR02437	714	FadB fatty oxidation complex, alpha subunit FadB.	99.8
PRK08184	550	benzoyl-CoA-dihydrodiol lyase; Provisional	99.8
TIGR02441	737	fa_ox_alpha_mit fatty acid oxidation complex, alph	99.8
PRK08184	550	benzoyl-CoA-dihydrodiol lyase; Provisional	99.8
TIGR02440	699	FadJ fatty oxidation complex, alpha subunit FadJ.	99.79
KOG1684	401	consensus Enoyl-CoA hydratase [Lipid transport and	99.75
KOG0016	266	consensus Enoyl-CoA hydratase/isomerase [Lipid tra	99.74
KOG1679	291	consensus Enoyl-CoA hydratase [Lipid transport and	99.72
KOG1682	287	consensus Enoyl-CoA isomerase [Lipid transport and	99.63
cd07019	211	S49_SppA_1 Signal peptide peptidase A (SppA), a se	98.66
cd07014	177	S49_SppA Signal peptide peptidase A. Signal peptid	98.46
cd07023	208	S49_Sppa_N_C Signal peptide peptidase A (SppA), a	98.2
cd07022	214	S49_Sppa_36K_type Signal peptide peptidase A (SppA	98.15
cd07018	222	S49_SppA_67K_type Signal peptide peptidase A (SppA	97.59
TIGR00706	207	SppA_dom signal peptide peptidase SppA, 36K type.	97.58
cd00394	161	Clp_protease_like Caseinolytic protease (ClpP) is	97.57
TIGR00705	584	SppA_67K signal peptide peptidase SppA, 67K type.	96.56
KOG1683	380	consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA	96.52
cd07020	187	Clp_protease_NfeD_1 Nodulation formation efficienc	96.41
cd07021	178	Clp_protease_NfeD_like Nodulation formation effici	94.61
COG0074	293	SucD Succinyl-CoA synthetase, alpha subunit [Energ	91.0
cd07016	160	S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-	89.22
PRK10949	618	protease 4; Provisional	88.48
TIGR00705	584	SppA_67K signal peptide peptidase SppA, 67K type.	88.21
PF13607	138	Succ_CoA_lig: Succinyl-CoA ligase like flavodoxin	87.38
TIGR00237	432	xseA exodeoxyribonuclease VII, large subunit. This	85.92
PTZ00187	317	succinyl-CoA synthetase alpha subunit; Provisional	85.14
PF02601	319	Exonuc_VII_L: Exonuclease VII, large subunit; Inte	84.71
PLN02522	608	ATP citrate (pro-S)-lyase	81.9
PRK10949	618	protease 4; Provisional	80.8

>PLN02921 naphthoate synthase

Probab=100.00  E-value=1.8e-34  Score=242.49  Aligned_cols=171  Identities=70%  Similarity=1.041  Sum_probs=139.5

Q ss_pred             hHHHHHHHHHhhhccccCCcCCCCCCcccccCCCCCCccccccCCCccccchhhhhccCCCCCcccEEEEEEeCCCEEEE
Q 030574            5 IDSARRRMTAVANHLVPVISSDSNSGFIGLNNASMNDSYHRIHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKI   84 (175)
Q Consensus         5 ~~~~~~r~~~i~~hl~~~~~~~~~~~~~~~~~~~~~~sy~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~e~~~~~~V~~I   84 (175)
                      |+++.||++++++||.+.....+..+....+....+++|++.|+.++.+|..|...++++..+|+.|.++++.+++|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Va~I   80 (327)
T PLN02921          1 MDAARRRLARVANHLVPSANPASMAAARSSSATAPPDSYRRVHGDVSSEPVVWRKVPDGSGKEFTDIIYEKAVGEGIAKI   80 (327)
T ss_pred             CchhhhHHHHHhcccCcccccccccccccccccCCCCchhhhccccCCCCccccccccCCccCCceEEEEEecCCCEEEE
Confidence            78999999999999986644444444333344478899999999999999999998888888999999987335899999


Q ss_pred             EEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHHHHHHhcC
Q 030574           85 TINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRL  164 (175)
Q Consensus        85 tLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  164 (175)
                      +||||+++|+|+.+|+.+|.++|+.++.|+++++|||+|.|+++||+|+|++++.................+++.+|.++
T Consensus        81 tLnrP~~~Nal~~~~~~eL~~al~~~~~d~~vrvVVLtg~G~k~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  160 (327)
T PLN02921         81 TINRPERRNAFRPRTVKELQRAFNDARDDSSVGVIILTGKGTKAFCSGGDQAVRGKDGYVGPDDAGRLNVLDLQIQIRRL  160 (327)
T ss_pred             EECCCCCCCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceecCcChhhhhcccccchhHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999998779999999997753221111111111234567789999


Q ss_pred             CCcEEEEeeCC
Q 030574          165 PKPVIAMVHLP  175 (175)
Q Consensus       165 ~kPvIAaV~G~  175 (175)
                      +||+||+|||+
T Consensus       161 ~kPvIAaVnG~  171 (327)
T PLN02921        161 PKPVIAMVAGY  171 (327)
T ss_pred             CCCEEEEECCE
Confidence            99999999996

>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism]

Probab=99.90  E-value=3.5e-24  Score=167.96  Aligned_cols=109  Identities=64%  Similarity=0.995  Sum_probs=97.1

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecC--CCCcccCCCCCCcccc-CC
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGK--GTEAFCSGGDQALRTR-DG  142 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~--g~~~FcaG~Dl~~~~~-~~  142 (175)
                      ..|+.|.+++. -++|+.|+||||+++|+|.+.++.||.++|..++.|++|.||||||.  |+++||+|+|.+.... .+
T Consensus        15 ~~y~dI~Y~~~-~~giakItinRPevrNAfrP~TV~Em~~Af~~Ar~d~~vGvi~lTG~~~G~~AFCsGGDQ~vRg~~~g   93 (282)
T COG0447          15 EGYEDITYEKS-VDGIAKITINRPEVRNAFRPKTVDEMIDAFADARDDPNVGVILLTGNGDGDKAFCSGGDQKVRGDSGG   93 (282)
T ss_pred             CCcceeEEeec-cCceEEEEecChhhhccCCCccHHHHHHHHHhhhcCCCccEEEEecCCCCCeeeecCCCceecccCCC
Confidence            46899999995 48999999999999999999999999999999999999999999975  8899999999997766 55


Q ss_pred             ccchhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          143 YADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      +...+...+..+.++++.|+.+||||||+|+|+
T Consensus        94 Y~~d~~~~rLnvLdlQrlIR~~PKpViA~V~G~  126 (282)
T COG0447          94 YVDDDGIPRLNVLDLQRLIRTMPKPVIAMVAGY  126 (282)
T ss_pred             ccCCccCcccchhhHHHHHHhCCcceEEEEeeE
Confidence            555555566677888999999999999999995

>PRK07396 dihydroxynaphthoic acid synthetase; Validated

Probab=99.90  E-value=1.3e-23  Score=172.65  Aligned_cols=108  Identities=65%  Similarity=1.007  Sum_probs=87.4

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccc
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYAD  145 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~  145 (175)
                      .+++.+.++.  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.|+++||+|+|++++.......
T Consensus        10 ~~~~~i~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~   87 (273)
T PRK07396         10 KEYEDILYKS--ADGIAKITINRPEVRNAFRPKTVKEMIDAFADARDDDNIGVIILTGAGDKAFCSGGDQKVRGYGGYVD   87 (273)
T ss_pred             CCCcceEEEe--cCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEeCCCCceEeCcChhhhhcccccc
Confidence            4567889987  89999999999999999999999999999999999999999999999856999999999864321111


Q ss_pred             hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ...........++..+.++|||+||+|||+
T Consensus        88 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  117 (273)
T PRK07396         88 DDGVPRLNVLDLQRLIRTCPKPVIAMVAGY  117 (273)
T ss_pred             hhhhhhhHHHHHHHHHHhCCCCEEEEECCE
Confidence            111111123456678999999999999996

>PRK06143 enoyl-CoA hydratase; Provisional

Probab=99.90  E-value=1.2e-23  Score=171.49  Aligned_cols=106  Identities=25%  Similarity=0.273  Sum_probs=87.6

Q ss_pred             cccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchh
Q 030574           68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYE  147 (175)
Q Consensus        68 ~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~  147 (175)
                      ..++.++.. +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|+++||+|+|++++.........
T Consensus         5 ~~~~~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~   83 (256)
T PRK06143          5 NAHAGVTRD-DRGVATLTIRNAGSLNILGTPVILALTQALRWLAADPDVRVLVLRGAGEKAFIGGADIKEMATLDQASAE   83 (256)
T ss_pred             cccceeeec-CCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEeCCCCcccCCcCHHHHhhcChhhHH
Confidence            345777764 7899999999999999999999999999999999999999999999986799999999987543222221


Q ss_pred             hhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          148 NFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       148 ~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      . ....++.++.+|.++|||+||+|||+
T Consensus        84 ~-~~~~~~~~~~~l~~~~kPvIAav~G~  110 (256)
T PRK06143         84 A-FISRLRDLCDAVRHFPVPVIARIPGW  110 (256)
T ss_pred             H-HHHHHHHHHHHHHhCCCCEEEEECCE
Confidence            1 22234677888999999999999996

>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated

Probab=99.90  E-value=1.6e-23  Score=170.94  Aligned_cols=107  Identities=34%  Similarity=0.411  Sum_probs=89.3

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccc
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYAD  145 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~  145 (175)
                      |+|+.+.++.  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.|+++||+|+|++++.......
T Consensus         1 ~~~~~i~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~~F~aG~Dl~~~~~~~~~~   78 (260)
T PRK05809          1 MELKNVILEK--EGHIAVVTINRPKALNALNSETLKELDTVLDDIENDDNVYAVILTGAGEKAFVAGADISEMKDLNEEE   78 (260)
T ss_pred             CCcceEEEEE--eCCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEcCCCCceeeCcChHhHhccChHH
Confidence            3567788887  79999999999999999999999999999999999999999999999878999999999875432211


Q ss_pred             hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ... .......++.+|.++|||+||+|||+
T Consensus        79 ~~~-~~~~~~~~~~~l~~~~kPvIaav~G~  107 (260)
T PRK05809         79 GRK-FGLLGNKVFRKLENLDKPVIAAINGF  107 (260)
T ss_pred             HHH-HHHHHHHHHHHHHcCCCCEEEEEcCe
Confidence            111 12224567788999999999999996

>PRK06144 enoyl-CoA hydratase; Provisional

Probab=99.90  E-value=1.7e-23  Score=171.05  Aligned_cols=107  Identities=26%  Similarity=0.311  Sum_probs=87.9

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccch
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADY  146 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~  146 (175)
                      ..+.+.++.  +++|++|+||||+++|+|+.+|+++|.++++.++.|+++|+|||+|.|+++||+|+|++++........
T Consensus         6 ~~~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVltg~g~~~F~aG~Dl~~~~~~~~~~~   83 (262)
T PRK06144          6 STDELLLEV--RGGIARITFNRPAARNAMTWAMYEGLAEICEAIAADPSIRAVVLRGAGDKAFVAGTDIAQFRAFSTAED   83 (262)
T ss_pred             CCCceEEEe--eCCEEEEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcCHHHHhhccchhH
Confidence            345688887  899999999999999999999999999999999999999999999998679999999998754322111


Q ss_pred             hhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          147 ENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       147 ~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .......+..++.+|.++|||+||+|||+
T Consensus        84 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~  112 (262)
T PRK06144         84 AVAYERRIDRVLGALEQLRVPTIAAIAGA  112 (262)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence            11122234567778999999999999996

>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase

Probab=99.90  E-value=1.7e-23  Score=170.51  Aligned_cols=104  Identities=47%  Similarity=0.697  Sum_probs=86.2

Q ss_pred             cccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchh
Q 030574           68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYE  147 (175)
Q Consensus        68 ~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~  147 (175)
                      |+.|.++.  +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.|+++||+|+|++++..... ...
T Consensus         1 ~~~i~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~-~~~   77 (256)
T TIGR03210         1 YEDILYEK--RNGIAWIMINRPAKMNAFRGQTCDELIHALKDAGYDRQIGVIVLAGAGDKAFCTGGDQSTHDGGYD-GRG   77 (256)
T ss_pred             CCceEEEe--eCCEEEEEEcCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcChHHHhcccc-chh
Confidence            34578887  799999999999999999999999999999999999999999999998679999999998743111 111


Q ss_pred             hhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          148 NFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       148 ~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                       .....+..++.+|..+|||+||+|||+
T Consensus        78 -~~~~~~~~~~~~l~~~~kPvIaav~G~  104 (256)
T TIGR03210        78 -TIGLPMEELHSAIRDVPKPVIARVQGY  104 (256)
T ss_pred             -HHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence             112224567788999999999999996

Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.

>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated

Probab=99.90  E-value=2.1e-23  Score=170.86  Aligned_cols=108  Identities=27%  Similarity=0.461  Sum_probs=87.9

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccc
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYAD  145 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~  145 (175)
                      ++|+++.++.+ +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++.......
T Consensus         2 ~~~~~l~~~~~-~~~v~~itlnrp~~~Nal~~~~~~el~~al~~~~~d~~vr~vVl~g~g-~~F~aG~Dl~~~~~~~~~~   79 (265)
T PRK05674          2 SDFQTIELIRD-PRGFATLWLSRADKNNAFNAQMIRELILALDQVQSDASLRFLLLRGRG-RHFSAGADLAWMQQSADLD   79 (265)
T ss_pred             CCcceEEEEEc-CCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCC-CCcccCcCHHHHhhccccc
Confidence            35778999873 478999999999999999999999999999999999999999999999 8999999999764321111


Q ss_pred             --hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 --YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 --~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                        ........+..++.++.++|||+||+|||+
T Consensus        80 ~~~~~~~~~~~~~~~~~l~~~~kPvIaaV~G~  111 (265)
T PRK05674         80 YNTNLDDARELAELMYNLYRLKIPTLAVVQGA  111 (265)
T ss_pred             chhhhHHHHHHHHHHHHHHcCCCCEEEEEcCE
Confidence              010111224567788999999999999996

>PRK05995 enoyl-CoA hydratase; Provisional

Probab=99.90  E-value=2.3e-23  Score=170.09  Aligned_cols=106  Identities=36%  Similarity=0.542  Sum_probs=87.6

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc-c-
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY-A-  144 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~-~-  144 (175)
                      .|+.+.++.  +++|++||||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++..... . 
T Consensus         2 ~~~~i~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~   78 (262)
T PRK05995          2 MYETLEIEQ--RGQVATVTLNRPDVRNAFNETVIAELTAAFRALDADDSVRAVVLAGAG-KAFCAGADLNWMKKMAGYSD   78 (262)
T ss_pred             CCceEEEEe--eCCEEEEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCC-CccccCcCHHHHhhhcccCc
Confidence            466788887  799999999999999999999999999999999999999999999999 89999999998643211 1 


Q ss_pred             chhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          145 DYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       145 ~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .........+.+++.+|.++|||+||+|||+
T Consensus        79 ~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~  109 (262)
T PRK05995         79 DENRADARRLADMLRAIYRCPKPVIARVHGD  109 (262)
T ss_pred             hhhhhHHHHHHHHHHHHHcCCCCEEEEECCE
Confidence            1111111234677888999999999999996

>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]

Probab=99.90  E-value=2.4e-23  Score=169.59  Aligned_cols=106  Identities=35%  Similarity=0.485  Sum_probs=88.3

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccch
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADY  146 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~  146 (175)
                      .+..+.++.  +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+||+++........
T Consensus         3 ~~~~~~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvltg~g-~~FsaG~Dl~~~~~~~~~~~   79 (257)
T COG1024           3 TYETILVER--EDGIAVITLNRPEKLNALNLEMLDELAEALDEAEADPDVRVVVLTGAG-KAFSAGADLKELLSPEDGNA   79 (257)
T ss_pred             CCCeeEEEe--eCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCC-CceecccCHHHHhcccchhH
Confidence            455677777  677999999999999999999999999999999999999999999999 99999999998875111111


Q ss_pred             hhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          147 ENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       147 ~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ........+.++.++.+++|||||+|||+
T Consensus        80 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~  108 (257)
T COG1024          80 AENLMQPGQDLLRALADLPKPVIAAVNGY  108 (257)
T ss_pred             HHHHHhHHHHHHHHHHhCCCCEEEEEcce
Confidence            11222334668899999999999999996

>PRK06142 enoyl-CoA hydratase; Provisional

Probab=99.90  E-value=2.9e-23  Score=170.39  Aligned_cols=107  Identities=26%  Similarity=0.309  Sum_probs=87.8

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc--
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY--  143 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~--  143 (175)
                      +.++.|.+++  +++|++|+||||+++|+||.+|+.+|.++|++++.|+++|+|||+|.| ++||+|+|++++.....  
T Consensus         3 ~~~~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g-~~FcaG~Dl~~~~~~~~~~   79 (272)
T PRK06142          3 TTYESFTVEL--ADHVAQVTLNRPGKGNAMNPAFWSELPEIFRWLDADPEVRAVVLSGSG-KHFSYGIDLPAMAGVFGQL   79 (272)
T ss_pred             CCcceEEEEe--cCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCC-CceecccCHHHHhhhcccc
Confidence            3456788987  899999999999999999999999999999999999999999999999 89999999998743110  


Q ss_pred             ------cchhhh--hHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          144 ------ADYENF--GRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       144 ------~~~~~~--~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                            ......  ....+.+++.+|.+||||+||+|||+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvIAav~G~  119 (272)
T PRK06142         80 GKDGLARPRTDLRREILRLQAAINAVADCRKPVIAAVQGW  119 (272)
T ss_pred             cccccccchHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc
Confidence                  001111  12234567788999999999999996

>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase)

Probab=99.90  E-value=3.4e-23  Score=169.06  Aligned_cols=106  Identities=65%  Similarity=0.978  Sum_probs=84.4

Q ss_pred             ccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhh
Q 030574           69 TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYEN  148 (175)
Q Consensus        69 ~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~  148 (175)
                      +.+.+++. +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||||.|+++||+|+|++++..........
T Consensus         2 ~~i~~~~~-~~~v~~itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~   80 (259)
T TIGR01929         2 TDIRYEKS-TDGIAKITINRPQVRNAFRPLTVKEIIQALDDAREDPDIGVVILTGAGDKAFCSGGDQKVRGDYGYIDDSG   80 (259)
T ss_pred             ceEEEEEc-CCCEEEEEecCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEeCCCCceEeCcChHhHhhccccchhh
Confidence            45677652 68899999999999999999999999999999999999999999999867999999998764321111111


Q ss_pred             hhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          149 FGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       149 ~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .....+..++.++..+|||+||+|||+
T Consensus        81 ~~~~~~~~~~~~l~~~~kPvIAav~G~  107 (259)
T TIGR01929        81 VHRLNVLDVQRQIRTCPKPVIAMVNGY  107 (259)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEEcCE
Confidence            111123456778999999999999996

This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.

>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated

Probab=99.90  E-value=3.6e-23  Score=170.34  Aligned_cols=107  Identities=31%  Similarity=0.443  Sum_probs=87.7

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc-c
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY-A  144 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~-~  144 (175)
                      .+|++|.++.  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++..... .
T Consensus         5 ~~~~~i~~~~--~~~va~itlnrp~~~Nal~~~m~~el~~al~~~~~d~~vr~vVl~g~g-~~F~aG~Dl~~~~~~~~~~   81 (275)
T PRK09120          5 NRWDTVKVEV--EDGIAWVTLNRPEKRNAMSPTLNREMIDVLDALEFDDDAGVLVLTGAG-DAWSAGMDLKEYFRETDAQ   81 (275)
T ss_pred             cccccEEEEE--ECCEEEEEecCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCC-CceecCcCHHHHhhccccc
Confidence            3567899988  799999999999999999999999999999999999999999999999 89999999997643111 1


Q ss_pred             ch--hhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          145 DY--ENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       145 ~~--~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ..  .......++.++.+|..|||||||+|||+
T Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  114 (275)
T PRK09120         82 PEILQERIRREAYGWWRRLRWYQKPTIAMVNGW  114 (275)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCE
Confidence            11  11111224566788999999999999996

>PRK05870 enoyl-CoA hydratase; Provisional

Probab=99.90  E-value=4.7e-23  Score=167.29  Aligned_cols=102  Identities=30%  Similarity=0.435  Sum_probs=85.2

Q ss_pred             cEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhh
Q 030574           70 DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENF  149 (175)
Q Consensus        70 ~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~  149 (175)
                      .+.++.  +++|++|+||||+++|+||.+|+++|.++++.++.|+++|+|||+|.| +.||+|+|++++...........
T Consensus         4 ~i~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~   80 (249)
T PRK05870          4 PVLLDV--DDGVALITVNDPDRRNAVTAEMSAQLRAAVAAAEADPDVHALVVTGAG-KAFCAGADLTALGAAPGRPAEDG   80 (249)
T ss_pred             cEEEEc--cCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCC-CCeecCcChHHHhcccccchHHH
Confidence            477777  899999999999999999999999999999999999999999999999 89999999998754322111111


Q ss_pred             hHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          150 GRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       150 ~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      . ..+++++..+.++|||+||+|||+
T Consensus        81 ~-~~~~~~~~~l~~~~kPvIaav~G~  105 (249)
T PRK05870         81 L-RRIYDGFLAVASCPLPTIAAVNGA  105 (249)
T ss_pred             H-HHHHHHHHHHHhCCCCEEEEECCE
Confidence            2 224566778999999999999996

>PRK08139 enoyl-CoA hydratase; Validated

Probab=99.90  E-value=4.4e-23  Score=169.05  Aligned_cols=107  Identities=32%  Similarity=0.403  Sum_probs=88.2

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccc
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYAD  145 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~  145 (175)
                      +....+.++.  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++.......
T Consensus         8 ~~~~~~~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~   84 (266)
T PRK08139          8 TEAPLLLRED--RDGVATLTLNRPQAFNALSEAMLAALQAALDAIAADPSVRVVVLAAAG-KAFCAGHDLKEMRAARGLA   84 (266)
T ss_pred             ccCCceEEEe--eCCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEecCC-CcceeccCHHHHhcccchh
Confidence            4456688887  899999999999999999999999999999999999999999999999 8999999999875422111


Q ss_pred             hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ........+.+++.+|.++|||+||+|||+
T Consensus        85 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  114 (266)
T PRK08139         85 YFRALFARCSRVMQAIVALPQPVIARVHGI  114 (266)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEEEECce
Confidence            111111224567788999999999999996

>PRK05981 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=5.8e-23  Score=168.08  Aligned_cols=107  Identities=25%  Similarity=0.446  Sum_probs=87.5

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCC-CceEEEEecCCCCcccCCCCCCccccCCcc
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDS-SVGVIILTGKGTEAFCSGGDQALRTRDGYA  144 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~-~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~  144 (175)
                      |+|+.+.+++  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+ ++|+|||+|.| ++||+|+|++++......
T Consensus         1 ~~~~~v~~~~--~~~i~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~~v~vvvl~g~g-~~F~aG~Dl~~~~~~~~~   77 (266)
T PRK05981          1 MQFKKVTLDF--DGGVAILTLDHPEVMNAVSIDMLGGLAEALDAIEDGKAEVRCLVLTGAG-RGFCTGANLQGRGSGGRE   77 (266)
T ss_pred             CCcceEEEEe--ECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-CCcccccCHHhhhccccc
Confidence            4577788988  7999999999999999999999999999999999876 49999999999 899999999987542111


Q ss_pred             -----chhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          145 -----DYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       145 -----~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                           .........+.+++.+|.++|||+||+|||+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~  113 (266)
T PRK05981         78 SDSGGDAGAALETAYHPFLRRLRNLPCPIVTAVNGP  113 (266)
T ss_pred             ccccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence                 1111112224667888999999999999996

>PRK05980 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=4.2e-23  Score=168.39  Aligned_cols=104  Identities=31%  Similarity=0.399  Sum_probs=85.4

Q ss_pred             cEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc--cc-h
Q 030574           70 DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY--AD-Y  146 (175)
Q Consensus        70 ~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~--~~-~  146 (175)
                      .|.++.  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.|+++||+|+|++++.....  .. .
T Consensus         4 ~i~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~   81 (260)
T PRK05980          4 TVLIEI--RDGIALLTLNRPEKLNALNYALIDRLLARLDAIEVDESVRAVILTGAGDRAFSAGADIHEFSASVAAGADVA   81 (260)
T ss_pred             eEEEEE--ECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEEeCCCCceEcCcCHHHHhhhccccchhh
Confidence            477877  899999999999999999999999999999999999999999999998679999999997644211  11 1


Q ss_pred             hhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          147 ENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       147 ~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .......++.++.+|.++|||+||+|||+
T Consensus        82 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~  110 (260)
T PRK05980         82 LRDFVRRGQAMTARLEAFPKPVIAAVNGL  110 (260)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEEcCE
Confidence            11122224567788999999999999996

>PRK12478 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=5.6e-23  Score=170.99  Aligned_cols=107  Identities=32%  Similarity=0.434  Sum_probs=84.0

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCc-ccc---C
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQAL-RTR---D  141 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~-~~~---~  141 (175)
                      +.++.+.++.  +++|++|+||||+++|+|+.+|+.+|.++|+.++.|+++|+|||||.| ++||+|+||++ +..   .
T Consensus         2 ~~~~~v~~~~--~~~Va~ItLnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvvVLtG~G-~~FcaG~Dl~~~~~~~~~~   78 (298)
T PRK12478          2 PDFQTLLYTT--AGPVATITLNRPEQLNTIVPPMPDEIEAAIGLAERDQDIKVIVLRGAG-RAFSGGYDFGGGFQHWGEA   78 (298)
T ss_pred             CCceEEEEec--cCCEEEEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCcccCcCccccccccchh
Confidence            3456788887  899999999999999999999999999999999999999999999999 89999999986 321   0


Q ss_pred             ----Cc-cchhhhh---Hh--hHHHHHHHHhcCCCcEEEEeeCC
Q 030574          142 ----GY-ADYENFG---RL--NVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       142 ----~~-~~~~~~~---~~--~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                          .. .....+.   ..  .....+.+|.+++||+||+|||+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~  122 (298)
T PRK12478         79 MMTDGRWDPGKDFAMVTARETGPTQKFMAIWRASKPVIAQVHGW  122 (298)
T ss_pred             cccccccCchhhhhhhhhhhcchHHHHHHHHhCCCCEEEEEccE
Confidence                00 0011110   00  11234667899999999999996

>PRK07468 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=5.6e-23  Score=167.95  Aligned_cols=106  Identities=28%  Similarity=0.468  Sum_probs=85.7

Q ss_pred             cccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc-c-c
Q 030574           68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY-A-D  145 (175)
Q Consensus        68 ~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~-~-~  145 (175)
                      |+.+.++++ +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++..... . .
T Consensus         3 ~~~~~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~   80 (262)
T PRK07468          3 FETIRIAVD-ARGVATLTLNRPEKHNALSARMIAELTTAARRLAADAAVRVVVLTGAG-KSFCAGGDLGWMRAQMTADRA   80 (262)
T ss_pred             cceEEEEEc-CCcEEEEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCC-CcccCCcCHHHHHhhcccchh
Confidence            456888773 468999999999999999999999999999999999999999999999 89999999998643111 1 1


Q ss_pred             hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ........+..++.+|..+|||+||+|||+
T Consensus        81 ~~~~~~~~~~~~~~~l~~~~kPvIaav~G~  110 (262)
T PRK07468         81 TRIEEARRLAMMLKALNDLPKPLIGRIQGQ  110 (262)
T ss_pred             hHHHHHHHHHHHHHHHHcCCCCEEEEECCE
Confidence            111111224567788999999999999996

>PRK05862 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=5.8e-23  Score=167.40  Aligned_cols=102  Identities=28%  Similarity=0.386  Sum_probs=85.7

Q ss_pred             cccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchh
Q 030574           68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYE  147 (175)
Q Consensus        68 ~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~  147 (175)
                      ++.+.+++  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++.......  
T Consensus         3 ~~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g-~~F~aG~Dl~~~~~~~~~~--   77 (257)
T PRK05862          3 YETILVET--RGRVGLITLNRPKALNALNDALMDELGAALAAFDADEGIGAIVITGSE-KAFAAGADIKEMADLSFMD--   77 (257)
T ss_pred             CceEEEEe--eCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCC-CceECCcChHhHhccchhH--
Confidence            45688887  789999999999999999999999999999999999999999999999 8999999999875432111  


Q ss_pred             hhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          148 NFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       148 ~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      . ....+..++.+|.++|||+||+|||+
T Consensus        78 ~-~~~~~~~~~~~l~~~~kpvIaav~G~  104 (257)
T PRK05862         78 V-YKGDYITNWEKVARIRKPVIAAVAGY  104 (257)
T ss_pred             H-HHHHHHHHHHHHHhCCCCEEEEEccE
Confidence            1 11223456778999999999999996

>PRK06190 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=5.3e-23  Score=167.94  Aligned_cols=103  Identities=28%  Similarity=0.395  Sum_probs=87.3

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccch
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADY  146 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~  146 (175)
                      .++.+.++.  +++|++|+||||+++|+|+.+|+++|.++++.++.|+++|+|||+|.| ++||+|+|++++........
T Consensus         2 ~~~~v~~~~--~~~va~Itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~~~~~   78 (258)
T PRK06190          2 TEPILLVET--HDRVRTLTLNRPEARNALSAALRRALFAALAEADADDDVDVVVLTGAD-PAFCAGLDLKELGGDGSAYG   78 (258)
T ss_pred             CCceEEEEe--eCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCC-CCccCCcCHHHHhcccchhh
Confidence            456688887  899999999999999999999999999999999999999999999999 89999999998754321111


Q ss_pred             hhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          147 ENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       147 ~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .   ...+++++.+|.++|||+||+|||+
T Consensus        79 ~---~~~~~~~~~~i~~~~kPvIAaV~G~  104 (258)
T PRK06190         79 A---QDALPNPSPAWPAMRKPVIGAINGA  104 (258)
T ss_pred             H---HHHHHHHHHHHHhCCCCEEEEECCE
Confidence            1   1224567788999999999999996

>PRK07657 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=6.1e-23  Score=167.54  Aligned_cols=104  Identities=29%  Similarity=0.441  Sum_probs=86.3

Q ss_pred             cEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhh
Q 030574           70 DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENF  149 (175)
Q Consensus        70 ~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~  149 (175)
                      .|.+++. +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.|+++||+|+|++++.......... 
T Consensus         4 ~v~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~-   81 (260)
T PRK07657          4 NISVDYV-TPHVVKITLNRPRAANALSLALLEELQNILTQINEEANVRVVILTGAGEKAFCAGADLKERAGMNEEQVRH-   81 (260)
T ss_pred             eEEEEEc-cCCEEEEEEeCCcccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCceEcCcChHhhhcCChhhHHH-
Confidence            5777753 68999999999999999999999999999999999999999999999956999999999875422211111 


Q ss_pred             hHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          150 GRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       150 ~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ....++.++.+|.+||||+||+|||+
T Consensus        82 ~~~~~~~~~~~l~~~~kPvIaav~G~  107 (260)
T PRK07657         82 AVSLIRTTMEMVEQLPQPVIAAINGI  107 (260)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEEcCE
Confidence            12234677888999999999999996

>PRK08140 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=6.7e-23  Score=167.40  Aligned_cols=105  Identities=32%  Similarity=0.478  Sum_probs=85.4

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc---
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY---  143 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~---  143 (175)
                      .|+.+.++.  +++|++||||||+++|+|+.+|+.+|.++++.++ |+++++|||+|.| ++||+|+|++++.....   
T Consensus         2 ~~~~i~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~-d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~   77 (262)
T PRK08140          2 MYETILLAI--EAGVATLTLNRPDKLNSFTREMHRELREALDQVE-DDGARALLLTGAG-RGFCAGQDLADRDVTPGGAM   77 (262)
T ss_pred             CCceEEEEe--ECCEEEEEecCCcccCCCCHHHHHHHHHHHHHhc-CCCceEEEEECCC-CCcccCcChHHHhccccccc
Confidence            456688887  7999999999999999999999999999999999 9999999999999 89999999998743211   


Q ss_pred             cchhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          144 ADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       144 ~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ..........+..++.++.++|||+||+|||+
T Consensus        78 ~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~  109 (262)
T PRK08140         78 PDLGESIETFYNPLVRRLRALPLPVIAAVNGV  109 (262)
T ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence            11111111223456778999999999999996

>PRK07327 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=8.8e-23  Score=167.36  Aligned_cols=107  Identities=25%  Similarity=0.457  Sum_probs=87.3

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCcc-c
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYA-D  145 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~-~  145 (175)
                      .|+.|.++.. +++|++|+||||+++|+|+.+|+.+|.++|+.++.|+++|+|||||.| ++||+|+||+++...... .
T Consensus         9 ~~~~i~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~   86 (268)
T PRK07327          9 DYPALRFDRP-PPGVLEIVLNGPGALNAADARMHRELADIWRDVDRDPDVRVVLIRGEG-KAFSAGGDLALVEEMADDFE   86 (268)
T ss_pred             CCCeEEEEec-CCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHhhhCCCceEEEEECCC-CCcccccCHHHHhhccCcHH
Confidence            4667888763 578999999999999999999999999999999999999999999999 899999999977542211 1


Q ss_pred             hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ........+..++..|..+|||+||+|||+
T Consensus        87 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  116 (268)
T PRK07327         87 VRARVWREARDLVYNVINCDKPIVSAIHGP  116 (268)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCEEEEEcCe
Confidence            111111224567788999999999999996

>PRK05864 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=1.1e-22  Score=167.43  Aligned_cols=109  Identities=31%  Similarity=0.424  Sum_probs=87.2

Q ss_pred             CCCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc-
Q 030574           65 GTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY-  143 (175)
Q Consensus        65 ~~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~-  143 (175)
                      ..+++.|.++.. +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++..... 
T Consensus         5 ~~~~~~v~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vrvvVl~g~g-~~FcaG~Dl~~~~~~~~~   82 (276)
T PRK05864          5 RSTMSLVLVDHP-RPEIALITLNRPERMNSMAFDVMVPLKEALAEVSYDNSVRVVVLTGAG-RGFSSGADHKSAGVVPHV   82 (276)
T ss_pred             CCCCCceEEeee-cCCEEEEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCeecCcchhhhhccccc
Confidence            345666888763 689999999999999999999999999999999999999999999999 89999999997643110 


Q ss_pred             -----cchhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          144 -----ADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       144 -----~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                           ..........++.++.+|.+++||+||+|||+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~  119 (276)
T PRK05864         83 EGLTRPTYALRSMELLDDVILALRRLHQPVIAAVNGP  119 (276)
T ss_pred             ccccchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence                 00000111224566778899999999999996

>PRK08290 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=1.1e-22  Score=168.48  Aligned_cols=107  Identities=36%  Similarity=0.493  Sum_probs=86.6

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc--
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY--  143 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~--  143 (175)
                      |+++.+.++.  +++|++|+||||+++|+|+.+|+.+|.++++.+++|+++|+|||||.| ++||+|+|++++.....  
T Consensus         1 ~~~~~v~~~~--~~~Va~ItlnrP~~~Nal~~~~~~eL~~~l~~~~~d~~vrvvVltg~G-~~FcaG~Dl~~~~~~~~~~   77 (288)
T PRK08290          1 MEYEYVRYEV--AGRIARITLNRPEARNAQNRQMLYELDAAFRRAEADDAVRVIVLAGAG-KHFSAGHDLGSGTPGRDRD   77 (288)
T ss_pred             CCCceEEEEe--eCCEEEEEecCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCC-CccccCCCccccccccccc
Confidence            3566788887  899999999999999999999999999999999999999999999999 89999999997632111  


Q ss_pred             ----------------cchhh-h--hHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          144 ----------------ADYEN-F--GRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       144 ----------------~~~~~-~--~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                                      ..... .  ....+.+++.+|.++|||+||+|||+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvIAaVnG~  128 (288)
T PRK08290         78 PGPDQHPTLWWDGATKPGVEQRYAREWEVYLGMCRRWRDLPKPTIAQVQGA  128 (288)
T ss_pred             cccccccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence                            00000 1  11124566778999999999999996

>PRK06495 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=9.9e-23  Score=166.09  Aligned_cols=105  Identities=29%  Similarity=0.408  Sum_probs=85.9

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc-cc
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY-AD  145 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~-~~  145 (175)
                      .|+.|.+++  +++|++||||||+ .|+|+.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++..... ..
T Consensus         2 ~~~~i~~~~--~~~v~~itlnrp~-~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g-~~FcaG~Dl~~~~~~~~~~~   77 (257)
T PRK06495          2 MMSQLKLEV--SDHVAVVTLDNPP-VNALSRELRDELIAVFDEISERPDVRVVVLTGAG-KVFCAGADLKGRPDVIKGPG   77 (257)
T ss_pred             CcceEEEEe--eCCEEEEEECCCc-cccCCHHHHHHHHHHHHHHhhCCCceEEEEECCC-CCcccCcCHHhHhhccCCch
Confidence            456788887  7999999999998 5999999999999999999999999999999999 89999999998754211 11


Q ss_pred             hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ........+.+++.++.++|||+||+|||+
T Consensus        78 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  107 (257)
T PRK06495         78 DLRAHNRRTRECFHAIRECAKPVIAAVNGP  107 (257)
T ss_pred             hHHHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence            111112234567788999999999999996

>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein

Probab=99.89  E-value=1e-22  Score=175.27  Aligned_cols=103  Identities=22%  Similarity=0.326  Sum_probs=86.0

Q ss_pred             ccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc----c
Q 030574           69 TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY----A  144 (175)
Q Consensus        69 ~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~----~  144 (175)
                      ..|.++.  .+++++||||||+++|+|+.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++.....    .
T Consensus        42 ~~v~~e~--~~~~~~ItLNRP~~lNALs~~m~~eL~~al~~~~~D~~vrvVVL~G~G-kaFcAGgDl~~l~~~~~~~~~~  118 (407)
T PLN02851         42 DQVLVEG--RAKSRAAILNRPSSLNALTIPMVARLKRLYESWEENPDIGFVLMKGSG-RAFCSGADVVSLYHLINEGNVE  118 (407)
T ss_pred             CCeEEEE--ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCccCCcCHHHHHhhccccchH
Confidence            4578887  789999999999999999999999999999999999999999999999 99999999998754211    1


Q ss_pred             chhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          145 DYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       145 ~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ....++ ...+++...|.++|||+||+|||+
T Consensus       119 ~~~~~f-~~~~~l~~~i~~~pKPvIA~v~G~  148 (407)
T PLN02851        119 ECKLFF-ENLYKFVYLQGTYLKPNVAIMDGI  148 (407)
T ss_pred             HHHHHH-HHHHHHHHHHHhCCCCEEEEEcCE
Confidence            111222 234667778899999999999995

>PRK08272 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=9.3e-23  Score=169.86  Aligned_cols=108  Identities=29%  Similarity=0.403  Sum_probs=88.5

Q ss_pred             CCCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCcc
Q 030574           65 GTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYA  144 (175)
Q Consensus        65 ~~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~  144 (175)
                      ...++.|.++.  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+||+++......
T Consensus         6 ~~~~~~v~~e~--~~~V~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~G~G-~~FcaG~Dl~~~~~~~~~   82 (302)
T PRK08272          6 LDNLKTMTYEV--TGRIARITLNRPEKGNAITADTPLELRAAVERADLDPGVHVILVSGAG-KGFCAGYDLSAYAEGSSS   82 (302)
T ss_pred             cCCCCeEEEEe--ECCEEEEEecCccccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCC-CCcccCcCHHHHhhcccc
Confidence            35677899988  789999999999999999999999999999999999999999999999 899999999976432110


Q ss_pred             ----c----------------hh---h-hhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          145 ----D----------------YE---N-FGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       145 ----~----------------~~---~-~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                          .                ..   . .....++.++.+|.++|||+||+|||+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~  137 (302)
T PRK08272         83 GGGGGAYPGKRQAVNHLPDDPWDPMIDYQMMSRFVRGFMSLWHAHKPTVAKVHGY  137 (302)
T ss_pred             cccccccccccccccccccccccchhhHHHHHHHHHHHHHHHhCCCCEEEEEccE
Confidence                0                00   0 011234567778999999999999996

>PRK06563 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=7.5e-23  Score=166.57  Aligned_cols=102  Identities=26%  Similarity=0.303  Sum_probs=80.3

Q ss_pred             EEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhh
Q 030574           71 IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFG  150 (175)
Q Consensus        71 v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~  150 (175)
                      |.++.  +++|++||||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| +.||+|+|++++............
T Consensus         1 ~~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vrvvvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~   77 (255)
T PRK06563          1 VSRER--RGHVLLIGLDRPAKRNAFDSAMLDDLALALGEYEADDELRVAVLFAHG-EHFTAGLDLADVAPKLAAGGFPFP   77 (255)
T ss_pred             CeEEE--ECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCC-CCCcCCcCHHHHhhccccchhhhh
Confidence            34666  799999999999999999999999999999999999999999999999 899999999987542111111111


Q ss_pred             HhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          151 RLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       151 ~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ......+...+.++||||||+|||+
T Consensus        78 ~~~~~~~~~~l~~~~kPvIAav~G~  102 (255)
T PRK06563         78 EGGIDPWGTVGRRLSKPLVVAVQGY  102 (255)
T ss_pred             hhhhHHHHHHHhcCCCCEEEEEcCe
Confidence            1111222235889999999999996

>PRK06127 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=9e-23  Score=167.39  Aligned_cols=105  Identities=30%  Similarity=0.401  Sum_probs=86.1

Q ss_pred             ccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc-cchh
Q 030574           69 TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY-ADYE  147 (175)
Q Consensus        69 ~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~-~~~~  147 (175)
                      +.|.+++  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++++|||+|.|+++||+|+|++++..... ....
T Consensus        11 ~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~   88 (269)
T PRK06127         11 GKLLAEK--TGGLGRITFNNPARHNAMSLDMWEALPQALAAAEDDDAIRVVVLTGAGEKAFVSGADISQFEESRSDAEAV   88 (269)
T ss_pred             CceEEEE--ECCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecCcCHHHHhhcccchHHH
Confidence            3478887  799999999999999999999999999999999999999999999998679999999998754211 1111


Q ss_pred             hhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          148 NFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       148 ~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .........++.+|..+|||+||+|||+
T Consensus        89 ~~~~~~~~~~~~~i~~~~kPvIaav~G~  116 (269)
T PRK06127         89 AAYEQAVEAAQAALADYAKPTIACIRGY  116 (269)
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence            1112224567788999999999999996

>PRK09674 enoyl-CoA hydratase-isomerase; Provisional

Probab=99.89  E-value=9.2e-23  Score=166.10  Aligned_cols=100  Identities=25%  Similarity=0.404  Sum_probs=84.0

Q ss_pred             cEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhh
Q 030574           70 DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENF  149 (175)
Q Consensus        70 ~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~  149 (175)
                      .|.+++  +++|++||||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++......   ..
T Consensus         3 ~i~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~~~~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~---~~   76 (255)
T PRK09674          3 ELLVSR--QQRVLLLTLNRPEARNALNNALLTQLVNELEAAATDTSIGVCVITGNA-RFFAAGADLNEMAEKDLA---AT   76 (255)
T ss_pred             eEEEEe--ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCC-CceecccChHhHhccchh---hh
Confidence            467776  799999999999999999999999999999999999999999999999 899999999987542111   11


Q ss_pred             hHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          150 GRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       150 ~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .......++.+|..+|||+||+|||+
T Consensus        77 ~~~~~~~~~~~l~~~~kPvIAav~G~  102 (255)
T PRK09674         77 LNDPRPQLWQRLQAFNKPLIAAVNGY  102 (255)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEECCE
Confidence            11223456778999999999999996

>PRK06210 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=1.2e-22  Score=166.68  Aligned_cols=107  Identities=35%  Similarity=0.521  Sum_probs=87.2

Q ss_pred             CCcccEEEEEEeCC-CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCcc
Q 030574           66 TEFTDIIYEKAVGE-GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYA  144 (175)
Q Consensus        66 ~~~~~v~~e~~~~~-~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~  144 (175)
                      |.|+.|.++.  ++ +|++|+||||+++|+||.+|+.+|.++|+.++.|+++++|||+|.| ++||+|+|++++......
T Consensus         2 ~~~~~i~~~~--~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g-~~FcaG~Dl~~~~~~~~~   78 (272)
T PRK06210          2 MAYDAVLYEV--ADSGVAVITLNRPDRLNAWTPVMEAEVYAAMDRAEADPAVRVIVLTGAG-RGFCAGADMGELQTIDPS   78 (272)
T ss_pred             CCcceEEEEE--CCCCEEEEEeCCcccccCCCHHHHHHHHHHHHHhccCCCeeEEEEECCC-CCcccccCHHHHhccCcc
Confidence            5677889987  77 9999999999999999999999999999999999999999999999 899999999987542211


Q ss_pred             ch------hhhhH---hhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          145 DY------ENFGR---LNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       145 ~~------~~~~~---~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ..      ..+..   ..+++++.+|.++|||+||+|||+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~  118 (272)
T PRK06210         79 DGRRDTDVRPFVGNRRPDYQTRYHFLTALRKPVIAAINGA  118 (272)
T ss_pred             cccccccchhhhhhhhhhHHHHHHHHHhCCCCEEEEECCe
Confidence            10      00111   123455678999999999999996

>PRK09076 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=1e-22  Score=166.11  Aligned_cols=102  Identities=19%  Similarity=0.230  Sum_probs=84.5

Q ss_pred             cEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhh
Q 030574           70 DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENF  149 (175)
Q Consensus        70 ~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~  149 (175)
                      .+.++.  +++|++||||||++ |+|+.+|+.+|.++++.++.|+++|+|||+|.|+++||+|+|++++.......... 
T Consensus         4 ~v~~~~--~~~v~~itlnrp~~-Nal~~~~~~~l~~al~~~~~d~~vrvvVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~-   79 (258)
T PRK09076          4 ELDLEI--DGHVAILTLNNPPA-NTWTADSLQALKQLVLELNADKDVYALVITGDGEKFFSAGADLNLFADGDKAVARE-   79 (258)
T ss_pred             EEEEEE--ECCEEEEEECCCCc-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceEeCcCHHHHhhcChhhHHH-
Confidence            477777  79999999999986 99999999999999999999999999999999867899999999875422211111 


Q ss_pred             hHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          150 GRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       150 ~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ....+..++.+|.++|||+||+|||+
T Consensus        80 ~~~~~~~~~~~l~~~~kPvIAav~G~  105 (258)
T PRK09076         80 MARRFGEAFEALSAFRGVSIAAINGY  105 (258)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEECCE
Confidence            12234567788999999999999996

>PRK07260 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=1.1e-22  Score=165.51  Aligned_cols=104  Identities=32%  Similarity=0.490  Sum_probs=86.1

Q ss_pred             ccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc-cchh
Q 030574           69 TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY-ADYE  147 (175)
Q Consensus        69 ~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~-~~~~  147 (175)
                      +++.++.  +++|++|+||||++.|+||.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++..... ....
T Consensus         2 ~~i~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~   78 (255)
T PRK07260          2 EHIIYEV--EDDLATLTLNRPEVSNGFNIPMCQEILEALRLAEEDPSVRFLLINANG-KVFSVGGDLVEMKRAVDEDDVQ   78 (255)
T ss_pred             CceEEEE--ECCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCcccccCHHHHHhhccccchh
Confidence            4577877  789999999999999999999999999999999999999999999999 89999999998753211 1111


Q ss_pred             h--hhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          148 N--FGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       148 ~--~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .  .....+++++.+|.++|||+||+|||+
T Consensus        79 ~~~~~~~~~~~~~~~l~~~~kPvIaav~G~  108 (255)
T PRK07260         79 SLVKIAELVNEISFAIKQLPKPVIMCVDGA  108 (255)
T ss_pred             hHHHHHHHHHHHHHHHHcCCCCEEEEecCe
Confidence            1  112234667788999999999999996

>PRK07659 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=1.6e-22  Score=165.15  Aligned_cols=106  Identities=25%  Similarity=0.444  Sum_probs=87.0

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccc
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYAD  145 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~  145 (175)
                      .+++.+.++.  +++|++|+||||+++|+++.+|+.+|.++++.+ .|+++|+|||+|.| ++||+|+|++++.......
T Consensus         3 ~~~~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~-~d~~vrvvvl~g~g-~~F~aG~Dl~~~~~~~~~~   78 (260)
T PRK07659          3 SKMESVVVKY--EGRVATIMLNRPEALNALDEPMLKELLQALKEV-AESSAHIVVLRGNG-RGFSAGGDIKMMLSSNDES   78 (260)
T ss_pred             CCCceEEEEe--eCCEEEEEeCCcccccCCCHHHHHHHHHHHHHh-cCCCeeEEEEECCC-CCcccccCHHHHhhccCch
Confidence            3455688887  899999999999999999999999999999999 58899999999999 8999999999875432211


Q ss_pred             hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ........+++++.++.++|||+||+|||+
T Consensus        79 ~~~~~~~~~~~~~~~l~~~~~pvIaav~G~  108 (260)
T PRK07659         79 KFDGVMNTISEIVVTLYTMPKLTISAIHGP  108 (260)
T ss_pred             hHHHHHHHHHHHHHHHHhCCCCEEEEecCc
Confidence            111122235677888999999999999996

>PRK07799 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=1.3e-22  Score=165.90  Aligned_cols=105  Identities=30%  Similarity=0.464  Sum_probs=83.6

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccch
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADY  146 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~  146 (175)
                      .++.+.+++  +++|++|+||||+++|+|+.+|+++|.++++.++.|+++|+|||+|.| ++||+|+|++++........
T Consensus         3 ~~~~i~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~   79 (263)
T PRK07799          3 GGPHALVEQ--RGHTLIVTMNRPEARNALSTEMLRIMVDAWDRVDNDPDIRSCILTGAG-GAFCAGMDLKAATKKPPGDS   79 (263)
T ss_pred             CCceEEEEE--ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CccccccCHHHHhhccccch
Confidence            345688887  799999999999999999999999999999999999999999999999 89999999998754321111


Q ss_pred             -h-h-hhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          147 -E-N-FGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       147 -~-~-~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                       . . .....+. .+.++..+|||+||+|||+
T Consensus        80 ~~~~~~~~~~~~-~~~~~~~~~kpvIaav~G~  110 (263)
T PRK07799         80 FKDGSYDPSRID-ALLKGRRLTKPLIAAVEGP  110 (263)
T ss_pred             hhhhhhhhhHHH-HHHHHhcCCCCEEEEECCe
Confidence             1 0 0011122 2345789999999999996

>PRK07658 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=1.6e-22  Score=164.74  Aligned_cols=102  Identities=25%  Similarity=0.308  Sum_probs=84.6

Q ss_pred             cEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhh
Q 030574           70 DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENF  149 (175)
Q Consensus        70 ~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~  149 (175)
                      .+.+++  +++|++|+||||++ |+|+.+|+++|.++++.++.|+++|+|||+|.| ++||+|+|++++...........
T Consensus         3 ~i~~~~--~~~v~~itl~rp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~   78 (257)
T PRK07658          3 FLSVRV--EDHVAVITLNHPPA-NALSSQVLHELSELLDQVEKDDNVRVVVIHGEG-RFFSAGADIKEFTSVTEAEQATE   78 (257)
T ss_pred             eEEEEe--eCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CceEeCcCHHHHhccCchhhHHH
Confidence            577877  89999999999986 999999999999999999999999999999999 89999999998754322111111


Q ss_pred             hHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          150 GRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       150 ~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ....+..++.+|.++|||+||+|||+
T Consensus        79 ~~~~~~~~~~~l~~~~kpvIAav~G~  104 (257)
T PRK07658         79 LAQLGQVTFERVEKFSKPVIAAIHGA  104 (257)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEEcCe
Confidence            12234567888999999999999996

>PRK07827 enoyl-CoA hydratase; Provisional

Probab=99.89  E-value=1.9e-22  Score=164.57  Aligned_cols=106  Identities=30%  Similarity=0.417  Sum_probs=86.9

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCC-c-c
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDG-Y-A  144 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~-~-~  144 (175)
                      ....+.++.  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++.... . .
T Consensus         4 ~~~~i~~~~--~~~v~~i~lnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~   80 (260)
T PRK07827          4 VDTLVRYAV--DGGVATLTLDSPHNRNALSARLVAQLHDGLRAAAADPAVRAVVLTHTG-GTFCAGADLSEAGGGGGDPY   80 (260)
T ss_pred             CCcceEEEe--eCCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCcChHHHhhcccCch
Confidence            344577777  789999999999999999999999999999999999999999999999 8999999999875421 1 1


Q ss_pred             chhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          145 DYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       145 ~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .........+.+++.+|.++|||+||+|||+
T Consensus        81 ~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~  111 (260)
T PRK07827         81 DAAVARAREMTALLRAIVELPKPVIAAIDGH  111 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCCEEEEEcCe
Confidence            1111112235667888999999999999996

>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase

Probab=99.89  E-value=1.9e-22  Score=165.93  Aligned_cols=97  Identities=31%  Similarity=0.427  Sum_probs=80.3

Q ss_pred             CCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCcc----c----hh--
Q 030574           78 GEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYA----D----YE--  147 (175)
Q Consensus        78 ~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~----~----~~--  147 (175)
                      +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++......    .    ..  
T Consensus        15 ~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~   93 (275)
T PLN02664         15 NSSVFHLNLNRPSQRNALSLDFFTEFPKALSSLDQNPNVSVIILSGAG-DHFCSGIDLKTLNSISEQSSSGDRGRSGERL   93 (275)
T ss_pred             CCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCC-CceeeCcChHHhhhcccccccccchhhHHHH
Confidence            799999999999999999999999999999999999999999999999 899999999987532110    0    00  


Q ss_pred             hhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          148 NFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       148 ~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ......+++++.+|.++|||+||+|||+
T Consensus        94 ~~~~~~~~~~~~~l~~~~kPvIaav~G~  121 (275)
T PLN02664         94 RRKIKFLQDAITAIEQCRKPVIAAIHGA  121 (275)
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEECCc
Confidence            1111224567778999999999999996

>PLN02600 enoyl-CoA hydratase

Probab=99.89  E-value=1e-22  Score=165.54  Aligned_cols=97  Identities=25%  Similarity=0.437  Sum_probs=81.2

Q ss_pred             CCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHH
Q 030574           78 GEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDL  157 (175)
Q Consensus        78 ~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~  157 (175)
                      +++|++||||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.++++||+|+|++++..........+ ...++.+
T Consensus         2 ~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~vr~vVl~g~~g~~F~aG~Dl~~~~~~~~~~~~~~-~~~~~~~   80 (251)
T PLN02600          2 DSGIVELRLDRPEAKNAIGKEMLRGLRSAFEKIQADASARVVMLRSSVPGVFCAGADLKERRKMSPSEVQKF-VNSLRST   80 (251)
T ss_pred             CCcEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceeeCcCHHHHhccChHHHHHH-HHHHHHH
Confidence            688999999999999999999999999999999999999999999985589999999998754322111112 2234667


Q ss_pred             HHHHhcCCCcEEEEeeCC
Q 030574          158 QVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       158 ~~~i~~~~kPvIAaV~G~  175 (175)
                      +.++.++|||+||+|||+
T Consensus        81 ~~~l~~~~kPvIAav~G~   98 (251)
T PLN02600         81 FSSLEALSIPTIAVVEGA   98 (251)
T ss_pred             HHHHHhCCCCEEEEecCe
Confidence            788999999999999996

>PRK06072 enoyl-CoA hydratase; Provisional

Probab=99.88  E-value=1.4e-22  Score=164.40  Aligned_cols=98  Identities=31%  Similarity=0.402  Sum_probs=83.1

Q ss_pred             EEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhh
Q 030574           71 IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFG  150 (175)
Q Consensus        71 v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~  150 (175)
                      |.++.  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| +.||+|+|++++....   ... .
T Consensus         2 i~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~a~~~~~~d~~vr~vVl~g~g-~~F~aG~Dl~~~~~~~---~~~-~   74 (248)
T PRK06072          2 IKVES--REGYAIVTMSRPDKLNALNLEMRNEFISKLKQINADPKIRVVIVTGEG-RAFCVGADLSEFAPDF---AID-L   74 (248)
T ss_pred             eEEEE--ECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCC-CCcccCcCHHHHhhhh---HHH-H
Confidence            45666  799999999999999999999999999999999999999999999999 8999999999765321   111 1


Q ss_pred             HhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          151 RLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       151 ~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ...+..++..|..+|||+||+|||+
T Consensus        75 ~~~~~~~~~~l~~~~kPvIaav~G~   99 (248)
T PRK06072         75 RETFYPIIREIRFSDKIYISAINGV   99 (248)
T ss_pred             HHHHHHHHHHHHhCCCCEEEEECCe
Confidence            2234567778999999999999996

>PRK08260 enoyl-CoA hydratase; Provisional

Probab=99.88  E-value=2e-22  Score=167.44  Aligned_cols=106  Identities=38%  Similarity=0.566  Sum_probs=86.2

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccC-Cc--
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRD-GY--  143 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~-~~--  143 (175)
                      .++.|.+++  +++|++|+||||+++|+|+.+|+.+|.++|+.++.|+++|+|||+|.| ++||+|+|++++... ..  
T Consensus         2 ~~~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~   78 (296)
T PRK08260          2 TYETIRYDV--ADGIATITLNRPDKLNAFTVTMARELIEAFDAADADDAVRAVIVTGAG-RAFCAGADLSAGGNTFDLDA   78 (296)
T ss_pred             CcceEEEee--eCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCC-CCeecCcChHHhhhcccccc
Confidence            355688887  899999999999999999999999999999999999999999999999 899999999976421 00  


Q ss_pred             -------------cchhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          144 -------------ADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       144 -------------~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                                   ..........+..++.+|..+|||+||+|||+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvIAav~G~  123 (296)
T PRK08260         79 PRTPVEADEEDRADPSDDGVRDGGGRVTLRIFDSLKPVIAAVNGP  123 (296)
T ss_pred             cccccccccccccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence                         00011112223456778999999999999996

>PRK08258 enoyl-CoA hydratase; Provisional

Probab=99.88  E-value=2.7e-22  Score=165.24  Aligned_cols=106  Identities=31%  Similarity=0.404  Sum_probs=86.7

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCC---c
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDG---Y  143 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~---~  143 (175)
                      .-+.+.++.  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++....   .
T Consensus        15 ~~~~~~~~~--~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~~~~~   91 (277)
T PRK08258         15 EARHFLWEV--DDGVATITLNRPERKNPLTFESYAELRDLFRELVYADDVKAVVLTGAG-GNFCSGGDVHEIIGPLTKMD   91 (277)
T ss_pred             cccceEEEE--ECCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEeCCC-CCcccccCHHHHhccccccC
Confidence            334688887  899999999999999999999999999999999999999999999999 8999999999874311   1


Q ss_pred             cchhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          144 ADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       144 ~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ..........+.+++.+|.++|||+||+|||+
T Consensus        92 ~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~  123 (277)
T PRK08258         92 MPELLAFTRMTGDLVKAMRACPQPIIAAVDGV  123 (277)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence            11111122224567888999999999999996

>PRK07509 enoyl-CoA hydratase; Provisional

Probab=99.88  E-value=2.2e-22  Score=164.30  Aligned_cols=104  Identities=29%  Similarity=0.415  Sum_probs=84.8

Q ss_pred             ccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhh
Q 030574           69 TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYEN  148 (175)
Q Consensus        69 ~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~  148 (175)
                      +.+.+++  +++|++|+||||+++|+|+.+|+++|.++++.++.|+++|+|||+|.| ++||+|+|++++..........
T Consensus         3 ~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~   79 (262)
T PRK07509          3 DRVSVTI--EDGIADVRLNRPDKMNALDFAMFEELIATIKRLKKDRGIRAVILSGEG-GAFCAGLDVKSVASSPGNAVKL   79 (262)
T ss_pred             ceEEEEe--eCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCC-CCcCCCcCHHHHhcccchhhhh
Confidence            4678887  899999999999999999999999999999999999999999999999 8999999999875422111111


Q ss_pred             hh------HhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          149 FG------RLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       149 ~~------~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ..      ...+..++.++.++|||+||+|||+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~kpvIaav~G~  112 (262)
T PRK07509         80 LFKRLPGNANLAQRVSLGWRRLPVPVIAALEGV  112 (262)
T ss_pred             HhhhhHHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence            11      1123455667889999999999996

>KOG1680 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]

Probab=99.88  E-value=6.2e-23  Score=165.85  Aligned_cols=94  Identities=44%  Similarity=0.596  Sum_probs=80.6

Q ss_pred             CCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHH
Q 030574           78 GEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDL  157 (175)
Q Consensus        78 ~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~  157 (175)
                      +++|+.|+||||+++|+|+..|+.||.++|..+++|+.++++||||.| ++||+|+||+++......+......   ...
T Consensus        44 d~~I~lItlNRP~~~Nal~~~~m~eL~~A~~~~e~D~s~~viVltG~g-ksFcsG~Dl~e~~~~~~~~~~~~~~---~~~  119 (290)
T KOG1680|consen   44 DNGIALITLNRPKALNALCRATMLELAEAFKDFESDDSVGVIVLTGSG-KSFCSGADLKEMKKDEFQDVSDGIF---LRV  119 (290)
T ss_pred             CCCeEEEEeCChHHhccccHHHHHHHHHHHHHhhccCcccEEEEEcCC-CccccccCHHHHhhccccccccccc---cch
Confidence            899999999999999999999999999999999999999999999999 9999999999988765554322221   222


Q ss_pred             HHHHhcCCCcEEEEeeCC
Q 030574          158 QVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       158 ~~~i~~~~kPvIAaV~G~  175 (175)
                      +..+.+++||+||+||||
T Consensus       120 ~~~~~~~~KPvIaainG~  137 (290)
T KOG1680|consen  120 WDLVSRLKKPVIAAINGF  137 (290)
T ss_pred             hhhhhhcccceeEeeece
Confidence            444558999999999996

>PRK08138 enoyl-CoA hydratase; Provisional

Probab=99.88  E-value=2.9e-22  Score=163.68  Aligned_cols=103  Identities=28%  Similarity=0.429  Sum_probs=85.7

Q ss_pred             cccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchh
Q 030574           68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYE  147 (175)
Q Consensus        68 ~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~  147 (175)
                      -+.+.++.. +++|++|+||||+++|+||.+|+.+|.++++.+++|+++|+|||+|.| ++||+|+|++++.....  ..
T Consensus         6 ~~~~~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g-~~F~aG~Dl~~~~~~~~--~~   81 (261)
T PRK08138          6 TDVVLLERP-ADGVALLRLNRPEARNALNMEVRQQLAEHFTELSEDPDIRAIVLTGGE-KVFAAGADIKEFATAGA--IE   81 (261)
T ss_pred             CCCEEEEEc-cCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCC-CCeeCCcCHHHHhccch--hH
Confidence            345777764 789999999999999999999999999999999999999999999998 89999999998754221  11


Q ss_pred             hhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          148 NFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       148 ~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                       .....+.+++.++.++|||+||+|||+
T Consensus        82 -~~~~~~~~~~~~l~~~~kPvIaav~G~  108 (261)
T PRK08138         82 -MYLRHTERYWEAIAQCPKPVIAAVNGY  108 (261)
T ss_pred             -HHHHHHHHHHHHHHhCCCCEEEEEccE
Confidence             112234567788999999999999996

>PRK11423 methylmalonyl-CoA decarboxylase; Provisional

Probab=99.88  E-value=2.4e-22  Score=164.26  Aligned_cols=105  Identities=26%  Similarity=0.346  Sum_probs=86.0

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCC-CCcccCCCCCCccccCCcc
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG-TEAFCSGGDQALRTRDGYA  144 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g-~~~FcaG~Dl~~~~~~~~~  144 (175)
                      |.++.+.++.  +++|++||||||+++|+||.+|+.+|.++++.++.|+ +|+|||+|.| +++||+|+|++++......
T Consensus         1 ~~~~~~~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~-v~~vvltg~~~~~~FcaG~Dl~~~~~~~~~   77 (261)
T PRK11423          1 MSMQYVNVVT--INKIATITFNNPAKRNALSKVLIDDLMQALSDLNRPE-IRVVILRAPSGSKVWSAGHDIHELPSGGRD   77 (261)
T ss_pred             CCccceEEEe--ECCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhcCC-ceEEEEECCCCCCeeECCcCHHHHhhcccc
Confidence            3566788887  8999999999999999999999999999999999887 9999999963 4899999999986432111


Q ss_pred             chhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          145 DYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       145 ~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                       ... ....+.+++.+|..+|||+||+|||+
T Consensus        78 -~~~-~~~~~~~l~~~i~~~~kPvIaav~G~  106 (261)
T PRK11423         78 -PLS-YDDPLRQILRMIQKFPKPVIAMVEGS  106 (261)
T ss_pred             -HHH-HHHHHHHHHHHHHhCCCCEEEEEecE
Confidence             111 12234567888999999999999996

>PRK06023 enoyl-CoA hydratase; Provisional

Probab=99.88  E-value=2.4e-22  Score=163.36  Aligned_cols=101  Identities=22%  Similarity=0.399  Sum_probs=83.6

Q ss_pred             cEEEEEEeCC---CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccch
Q 030574           70 DIIYEKAVGE---GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADY  146 (175)
Q Consensus        70 ~v~~e~~~~~---~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~  146 (175)
                      .|.+++  ++   +|++|+||||+++|+|+.+|+++|.++++.+++|+++|+|||+|.| ++||+|+|++++....... 
T Consensus         4 ~i~~~~--~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g-~~FcaG~Dl~~~~~~~~~~-   79 (251)
T PRK06023          4 HILVER--PGAHPGVQVIRFNRPEKKNAITRAMYATMAKALKAADADDAIRAHVFLGTE-GCFSAGNDMQDFLAAAMGG-   79 (251)
T ss_pred             eEEEEe--ecCcCcEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCeecCcCHHHHhhccccc-
Confidence            477777  44   5999999999999999999999999999999999999999999999 8999999999765421111 


Q ss_pred             hhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          147 ENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       147 ~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ..+ ...+++++.+|.++|||+||+|||+
T Consensus        80 ~~~-~~~~~~~~~~l~~~~kPvIAav~G~  107 (251)
T PRK06023         80 TSF-GSEILDFLIALAEAEKPIVSGVDGL  107 (251)
T ss_pred             hhh-HHHHHHHHHHHHhCCCCEEEEeCCc
Confidence            111 1234567788999999999999996

>PRK06688 enoyl-CoA hydratase; Provisional

Probab=99.88  E-value=3.2e-22  Score=162.97  Aligned_cols=102  Identities=37%  Similarity=0.547  Sum_probs=86.9

Q ss_pred             ccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhh
Q 030574           69 TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYEN  148 (175)
Q Consensus        69 ~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~  148 (175)
                      +.+.+++  +++|++|+||||++.|+|+.+|+++|.++++.++.|+++++|||+|.| ++||+|+|++++....... ..
T Consensus         5 ~~i~~~~--~~~v~~i~lnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~-~~   80 (259)
T PRK06688          5 TDLLVEL--EDGVLTITINRPDKKNALTAAMYQALADALEAAATDPAVRVVVLTGAG-RAFSAGGDIKDFPKAPPKP-PD   80 (259)
T ss_pred             CceEEEE--ECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCccCccCHHHHhccCcch-HH
Confidence            4578887  789999999999999999999999999999999999999999999999 8999999999875432221 11


Q ss_pred             hhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          149 FGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       149 ~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                       ....+++++.+|.++|||+||+|||+
T Consensus        81 -~~~~~~~~~~~l~~~~kp~Iaav~G~  106 (259)
T PRK06688         81 -ELAPVNRFLRAIAALPKPVVAAVNGP  106 (259)
T ss_pred             -HHHHHHHHHHHHHcCCCCEEEEECCe
Confidence             22235677888999999999999996

>PRK06494 enoyl-CoA hydratase; Provisional

Probab=99.88  E-value=2.4e-22  Score=164.01  Aligned_cols=103  Identities=28%  Similarity=0.344  Sum_probs=83.1

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccch
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADY  146 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~  146 (175)
                      .++.+.++.  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.|+++||+|+|++++........
T Consensus         2 ~~~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~   79 (259)
T PRK06494          2 ALPFSTVER--KGHVTIVTLNRPEVMNALHLDAHFELEEVFDDFAADPEQWVAIVTGAGDKAFSAGNDLKEQAAGGKRGW   79 (259)
T ss_pred             CCceeEEEe--ECCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEEcCCCCceeccccHHhHhhcCcchh
Confidence            456788887  799999999999999999999999999999999999999999999998679999999997653221111


Q ss_pred             hhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          147 ENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       147 ~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .   ...+..+ ..+.+||||+||+|||+
T Consensus        80 ~---~~~~~~~-~~~~~~~kPvIaav~G~  104 (259)
T PRK06494         80 P---ESGFGGL-TSRFDLDKPIIAAVNGV  104 (259)
T ss_pred             h---hHHHHHH-HHHhcCCCCEEEEECCE
Confidence            0   1112222 34568999999999996

>PRK09245 enoyl-CoA hydratase; Provisional

Probab=99.88  E-value=2.7e-22  Score=164.19  Aligned_cols=103  Identities=33%  Similarity=0.446  Sum_probs=84.2

Q ss_pred             cEEEEEEeCCCEEEEEEcCCCCCCCCCH-HHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc-----
Q 030574           70 DIIYEKAVGEGIAKITINRPDRRNAFRP-HTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY-----  143 (175)
Q Consensus        70 ~v~~e~~~~~~V~~ItLnrp~~~Nal~~-~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~-----  143 (175)
                      .+.+++  +++|++||||||+++|+|+. +|+++|.++++.++.|+++|+|||+|.| ++||+|+|++++.....     
T Consensus         4 ~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~   80 (266)
T PRK09245          4 FLLVER--DGHIVTLTMNRPETRNALSDNDAVDALVAACAAINADRSVRAVILTGAG-TAFSSGGNVKDMRARVGAFGGS   80 (266)
T ss_pred             ceEEEE--ECCEEEEEECCcccccCCChHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCcccCcCHHHHhhcccccccc
Confidence            477877  79999999999999999995 9999999999999999999999999999 89999999998753211     


Q ss_pred             c-chhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          144 A-DYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       144 ~-~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      . .........+..++.++.++|||+||+|||+
T Consensus        81 ~~~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~  113 (266)
T PRK09245         81 PADIRQGYRHGIQRIPLALYNLEVPVIAAVNGP  113 (266)
T ss_pred             chhHHHHHHHHHHHHHHHHHcCCCCEEEEECCE
Confidence            0 1111122223566778999999999999996

>PRK08150 enoyl-CoA hydratase; Provisional

Probab=99.88  E-value=2.5e-22  Score=163.62  Aligned_cols=100  Identities=28%  Similarity=0.391  Sum_probs=82.8

Q ss_pred             cEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhh
Q 030574           70 DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENF  149 (175)
Q Consensus        70 ~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~  149 (175)
                      .|.++.  +++|++|+||||+++|+||.+|+.+|.++++.++  +++|+|||||.| ++||+|+|++++...........
T Consensus         3 ~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~--~~vr~vvltg~g-~~F~aG~Dl~~~~~~~~~~~~~~   77 (255)
T PRK08150          3 LVSYEL--DGGVATIGLNRPAKRNALNDGLIAALRAAFARLP--EGVRAVVLHGEG-DHFCAGLDLSELRERDAGEGMHH   77 (255)
T ss_pred             eEEEEe--eCCEEEEEEcCCccccCCCHHHHHHHHHHHHHhh--cCCeEEEEECCC-CceecCcCHHHHhhccchhHHHH
Confidence            467777  7899999999999999999999999999999997  789999999999 89999999998754322111111


Q ss_pred             hHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          150 GRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       150 ~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                       ...++.++.+|.++|||+||+|||+
T Consensus        78 -~~~~~~~~~~l~~~~kPvIaav~G~  102 (255)
T PRK08150         78 -SRRWHRVFDKIQYGRVPVIAALHGA  102 (255)
T ss_pred             -HHHHHHHHHHHHhCCCCEEEEECCE
Confidence             2234667788999999999999996

>PRK05869 enoyl-CoA hydratase; Validated

Probab=99.88  E-value=2e-22  Score=161.25  Aligned_cols=95  Identities=22%  Similarity=0.330  Sum_probs=80.3

Q ss_pred             CCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHH
Q 030574           78 GEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDL  157 (175)
Q Consensus        78 ~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~  157 (175)
                      +++|++|+||||++ |+|+.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.......... ....++++
T Consensus        15 ~~~i~~itlnrp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~~~~~~~-~~~~~~~~   91 (222)
T PRK05869         15 DAGLATLLLSRPPT-NALTRQVYREIVAAANELGRRDDVAAVILYGGH-EIFSAGDDMPELRTLSAQEADT-AARVRQQA   91 (222)
T ss_pred             cCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCcCcCcCHHHHhccChhhHHH-HHHHHHHH
Confidence            58899999999985 999999999999999999999999999999998 8999999999875432222111 12234678


Q ss_pred             HHHHhcCCCcEEEEeeCC
Q 030574          158 QVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       158 ~~~i~~~~kPvIAaV~G~  175 (175)
                      +.+|.++|||+||+|||+
T Consensus        92 ~~~i~~~~kPvIAav~G~  109 (222)
T PRK05869         92 VDAVAAIPKPTVAAITGY  109 (222)
T ss_pred             HHHHHhCCCCEEEEEcCE
Confidence            889999999999999996

>PRK08321 naphthoate synthase; Validated

Probab=99.88  E-value=4.7e-22  Score=165.72  Aligned_cols=120  Identities=52%  Similarity=0.860  Sum_probs=91.8

Q ss_pred             ccchhhhhccCCCCCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCC------
Q 030574           53 HDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT------  126 (175)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~------  126 (175)
                      .++.|....   ...+..+.++++.+++|++||||||+++|+|+.+|+.+|.++++.++.|+++++|||+|.|+      
T Consensus        10 ~~~~~~~~~---~~~~~~i~~~~~~~~~va~itlnrP~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~~~~~~   86 (302)
T PRK08321         10 DPDLWRPVP---GFDFTDITYHRAVDQGTVRIAFDRPEVRNAFRPHTVDELYRALDHARMSPDVGCVLLTGNGPSPKDGG   86 (302)
T ss_pred             CcccccCcC---CCCceeEEEEEecCCCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCC
Confidence            477886432   23577788887556889999999999999999999999999999999999999999999983      


Q ss_pred             CcccCCCCCCccccCCc-----c--c-hh--hhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          127 EAFCSGGDQALRTRDGY-----A--D-YE--NFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       127 ~~FcaG~Dl~~~~~~~~-----~--~-~~--~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ++||+|+|++++.....     .  . ..  ........++...+..+|||+||+|||+
T Consensus        87 ~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkP~IAaV~G~  145 (302)
T PRK08321         87 WAFCSGGDQRIRGRDGYQYAEGDEADTVDPARAGRLHILEVQRLIRFMPKVVIAVVPGW  145 (302)
T ss_pred             CeeecCcChhhhccccccccccccccchhhhHHHHHHHHHHHHHHHcCCCCEEEEEcCe
Confidence            59999999987532110     0  0 00  1111112345667889999999999996

>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB

Probab=99.88  E-value=2.7e-22  Score=163.38  Aligned_cols=101  Identities=31%  Similarity=0.462  Sum_probs=81.9

Q ss_pred             EEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCcc--chhh
Q 030574           71 IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYA--DYEN  148 (175)
Q Consensus        71 v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~--~~~~  148 (175)
                      |.+++  +++|++||||||+++|+|+.+|+.+|.++++.++.|+ +|+|||+|.| ++||+|+|++++......  ....
T Consensus         1 ~~~e~--~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~-v~~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~~~~   76 (256)
T TIGR02280         1 ILSAL--EAGVARLTLNRPDKLNSFTAEMHLELREALERVERDD-ARALMLTGAG-RGFCAGQDLSERNPTPGGAPDLGR   76 (256)
T ss_pred             CeEEE--ECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCC-cEEEEEECCC-CCcccCcCHHHHhhccccchhHHH
Confidence            35666  7999999999999999999999999999999999998 9999999999 899999999987542211  1111


Q ss_pred             hhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          149 FGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       149 ~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .....+..++.++..+|||+||+|||+
T Consensus        77 ~~~~~~~~~~~~l~~~~kPvIaav~G~  103 (256)
T TIGR02280        77 TIETFYNPLVRRLRALPLPVVCAVNGV  103 (256)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence            111223456778999999999999996

This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).

>PRK07511 enoyl-CoA hydratase; Provisional

Probab=99.88  E-value=3.9e-22  Score=162.71  Aligned_cols=103  Identities=29%  Similarity=0.452  Sum_probs=85.5

Q ss_pred             cEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCC--ccchh
Q 030574           70 DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDG--YADYE  147 (175)
Q Consensus        70 ~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~--~~~~~  147 (175)
                      .+.++.  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| +.||+|+|++++....  .....
T Consensus         4 ~~~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~Dl~~~~~~~~~~~~~~   80 (260)
T PRK07511          4 ELLSRR--EGSTLVLTLSNPGARNALHPDMYAAGIEALNTAERDPSIRAVVLTGAG-GFFCAGGNLNRLLENRAKPPSVQ   80 (260)
T ss_pred             eeEEEe--ECCEEEEEECCcccccCCCHHHHHHHHHHHHHhccCCCeEEEEEECCC-CCcccCcCHHHHhhcccccchhH
Confidence            367776  899999999999999999999999999999999999999999999999 8999999999875421  11111


Q ss_pred             hhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          148 NFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       148 ~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ......+++++.++.++|||+||+|||+
T Consensus        81 ~~~~~~~~~~~~~l~~~~kpvIAav~G~  108 (260)
T PRK07511         81 AASIDGLHDWIRAIRAFPKPVIAAVEGA  108 (260)
T ss_pred             HHHHHHHHHHHHHHHcCCCCEEEEECCe
Confidence            1122235677888999999999999996

>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein

Probab=99.88  E-value=3.6e-22  Score=171.76  Aligned_cols=103  Identities=22%  Similarity=0.388  Sum_probs=84.8

Q ss_pred             ccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc-c--c
Q 030574           69 TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY-A--D  145 (175)
Q Consensus        69 ~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~-~--~  145 (175)
                      ..|.++.  +++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++..... .  .
T Consensus        37 ~~V~~e~--~g~v~~ItLNRP~~lNALs~~m~~~L~~al~~~~~D~~vrvVVl~G~G-kaFcAGgDl~~l~~~~~~~~~~  113 (401)
T PLN02157         37 YQVLVEG--SGCSRTAILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSG-RAFCAGGDIVSLYHLRKRGSPD  113 (401)
T ss_pred             CceEEEE--ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCC-CCccCCcCHHHHHhhccccchH
Confidence            3577887  799999999999999999999999999999999999999999999999 89999999998753211 1  1


Q ss_pred             -hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 -YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 -~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                       ...++. ..+.+..+|.++|||+||+|||+
T Consensus       114 ~~~~~~~-~~~~l~~~i~~~pkPvIA~v~G~  143 (401)
T PLN02157        114 AIREFFS-SLYSFIYLLGTYLKPHVAILNGV  143 (401)
T ss_pred             HHHHHHH-HHHHHHHHHHhCCCCEEEEEeCe
Confidence             111221 23446678999999999999995

>PRK07938 enoyl-CoA hydratase; Provisional

Probab=99.88  E-value=3.9e-22  Score=162.00  Aligned_cols=96  Identities=24%  Similarity=0.207  Sum_probs=79.2

Q ss_pred             CCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHH
Q 030574           78 GEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDL  157 (175)
Q Consensus        78 ~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~  157 (175)
                      +++|++|+||||++ |+|+.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++...............+..+
T Consensus         9 ~~~v~~itlnrp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~G-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~   86 (249)
T PRK07938          9 EPGIAEVTVDYPPV-NALPSAGWFALADAITAAGADPDTRVVVLRAEG-RGFNAGVDIKELQATPGFTALIDANRGCFAA   86 (249)
T ss_pred             CCCEEEEEECCCCc-ccCCHHHHHHHHHHHHHhhcCCCeEEEEEECCC-CceecCcCHHHHhhccchhHHHHHHHHHHHH
Confidence            78999999999975 999999999999999999999999999999999 8999999999865422111111111224567


Q ss_pred             HHHHhcCCCcEEEEeeCC
Q 030574          158 QVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       158 ~~~i~~~~kPvIAaV~G~  175 (175)
                      +.+|.++|||+||+|||+
T Consensus        87 ~~~i~~~~kPvIAav~G~  104 (249)
T PRK07938         87 FRAVYECAVPVIAAVHGF  104 (249)
T ss_pred             HHHHHhCCCCEEEEEcCE
Confidence            778999999999999996

>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated

Probab=99.87  E-value=6.6e-22  Score=160.62  Aligned_cols=102  Identities=27%  Similarity=0.275  Sum_probs=86.1

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccch
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADY  146 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~  146 (175)
                      -+..+.++.  +++|++|+||||++.|+|+.+|+.+|.+++++++.|+++|+|||+|.| ++||+|+|++++....... 
T Consensus         3 ~~~~~~~~~--~~~v~~i~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vvl~g~g-~~F~aG~Dl~~~~~~~~~~-   78 (249)
T PRK07110          3 MKVVELREV--EEGIAQVTMQDRVNKNAFSDELCDQLHEAFDTIAQDPRYKVVILTGYP-NYFATGGTQEGLLSLQTGK-   78 (249)
T ss_pred             CCceEEEEe--eCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCeeCCcChHHHhhccchh-
Confidence            456677877  899999999999999999999999999999999999999999999999 8999999999775432211 


Q ss_pred             hhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          147 ENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       147 ~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .. +..  .+++.++.++|||+||+|||+
T Consensus        79 ~~-~~~--~~~~~~l~~~~kPvIaav~G~  104 (249)
T PRK07110         79 GT-FTE--ANLYSLALNCPIPVIAAMQGH  104 (249)
T ss_pred             hh-Hhh--HHHHHHHHcCCCCEEEEecCc
Confidence            11 111  467788999999999999996

>PLN02888 enoyl-CoA hydratase

Probab=99.87  E-value=7.1e-22  Score=161.85  Aligned_cols=103  Identities=39%  Similarity=0.456  Sum_probs=84.2

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccch
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADY  146 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~  146 (175)
                      ..+.|.++.. +++|++|+||||+++|+|+.+|+.+|.++|+.++.|+++|+|||+|.| ++||+|+|++++........
T Consensus         7 ~~~~i~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~   84 (265)
T PLN02888          7 SENLILVPKS-RNGIATITINRPKALNALTRPMMVELAAAFKRLDEDDSVKVIILTGSG-RAFCSGVDLTAAEEVFKGDV   84 (265)
T ss_pred             CCCeEEEEec-cCCEEEEEEcCCCcccCCCHHHHHHHHHHHHHHhhCCCceEEEEECCC-CcccCCCCHHHHHhhccchh
Confidence            3456777753 689999999999999999999999999999999999999999999999 89999999987643111111


Q ss_pred             hhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          147 ENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       147 ~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .    ....+++..|.++|||+||+|||+
T Consensus        85 ~----~~~~~~~~~i~~~~kPvIaav~G~  109 (265)
T PLN02888         85 K----DVETDPVAQMERCRKPIIGAINGF  109 (265)
T ss_pred             h----HHHHHHHHHHHhCCCCEEEEECCe
Confidence            1    112455667899999999999996

>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein

Probab=99.87  E-value=5.3e-22  Score=170.03  Aligned_cols=107  Identities=26%  Similarity=0.270  Sum_probs=86.8

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc-c
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY-A  144 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~-~  144 (175)
                      +.+..+.++.  +++|++|+||||+++|+|+.+|+.+|.++++.++.|++||+|||+|.| ++||+|+|++++..... .
T Consensus         8 ~~~~~v~~~~--~~~v~~ItLnrP~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~g~g-~~FcaG~Dl~~~~~~~~~~   84 (379)
T PLN02874          8 PAEEVVLGEE--KGRVRVITLNRPRQLNVISLSVVSLLAEFLEQWEKDDSVELIIIKGAG-RAFSAGGDLKMFYDGRESD   84 (379)
T ss_pred             CCCCceEEEE--ECCEEEEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCC-CCccCccCHHHHHhhcccc
Confidence            4556788887  799999999999999999999999999999999999999999999999 89999999998743211 1


Q ss_pred             chhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          145 DYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       145 ~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .........++.+..+|.+++||+||+|||+
T Consensus        85 ~~~~~~~~~~~~l~~~i~~~~kPvIAaV~G~  115 (379)
T PLN02874         85 DSCLEVVYRMYWLCYHIHTYKKTQVALVHGL  115 (379)
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCCEEEEecCe
Confidence            1111111123455678899999999999996

>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated

Probab=99.87  E-value=8.3e-22  Score=160.54  Aligned_cols=104  Identities=18%  Similarity=0.303  Sum_probs=84.3

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccch
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADY  146 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~  146 (175)
                      +|+.+.++.  +++|++|+||||+++|+|+.+|+.+|.++++.++  +++|+|||+|.| ++||+|+|++++........
T Consensus         2 ~~~~i~~~~--~~~i~~itlnrp~~~Nal~~~~~~~L~~~l~~~~--~~vr~vVl~g~g-~~FsaG~Dl~~~~~~~~~~~   76 (255)
T PRK07112          2 DYQTIRVRQ--QGDVCFLQLHRPEAQNTINDRLIAECMDVLDRCE--HAATIVVLEGLP-EVFCFGADFSAIAEKPDAGR   76 (255)
T ss_pred             CCceEEEEe--eCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHhh--cCceEEEEEcCC-CCcccCcCHHHHhhccccch
Confidence            456788887  8999999999999999999999999999999998  369999999999 89999999998754211111


Q ss_pred             h-hhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          147 E-NFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       147 ~-~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      . ......+..++.+|.++|||+||+|||+
T Consensus        77 ~~~~~~~~~~~~~~~l~~~~kPvIaav~G~  106 (255)
T PRK07112         77 ADLIDAEPLYDLWHRLATGPYVTIAHVRGK  106 (255)
T ss_pred             hhhhhHHHHHHHHHHHHcCCCCEEEEEecE
Confidence            1 1112223567788999999999999996

>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional

Probab=99.87  E-value=6.9e-22  Score=167.29  Aligned_cols=103  Identities=29%  Similarity=0.485  Sum_probs=85.2

Q ss_pred             cEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc---cch
Q 030574           70 DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY---ADY  146 (175)
Q Consensus        70 ~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~---~~~  146 (175)
                      .+.+++  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.|+++||+|+|++++.....   ...
T Consensus         4 ~v~~~~--~~~v~~itLnrP~~~Nal~~~m~~~L~~~l~~~~~d~~vrvvVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~   81 (342)
T PRK05617          4 EVLAEV--EGGVGVITLNRPKALNALSLEMIRAIDAALDAWEDDDAVAAVVIEGAGERGFCAGGDIRALYEAARAGDPLA   81 (342)
T ss_pred             eEEEEE--ECCEEEEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEcCCCCceeCCcCHHHHHhhhccCCchh
Confidence            477877  799999999999999999999999999999999999999999999998789999999998643211   111


Q ss_pred             h-hhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          147 E-NFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       147 ~-~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      . .... ...+++.++.+++||+||+|||+
T Consensus        82 ~~~~~~-~~~~~~~~i~~~~kPvIAaVnG~  110 (342)
T PRK05617         82 ADRFFR-EEYRLNALIARYPKPYIALMDGI  110 (342)
T ss_pred             HHHHHH-HHHHHHHHHHhCCCCEEEEEcCE
Confidence            1 1121 23467778999999999999996

>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase

Probab=99.87  E-value=1.6e-21  Score=158.57  Aligned_cols=97  Identities=19%  Similarity=0.349  Sum_probs=81.2

Q ss_pred             EEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhh
Q 030574           71 IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFG  150 (175)
Q Consensus        71 v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~  150 (175)
                      |.++.  +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|+.++...   ..... 
T Consensus         3 v~~~~--~~~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~~~~vr~vVl~g~g-~~FcaG~Dl~~~~~~---~~~~~-   74 (251)
T TIGR03189         3 VWLER--DGKLLRLRLARPK-ANIVDAAMIAALSAALGEHLEDSALRAVLLDAEG-PHFSFGASVAEHMPD---QCAAM-   74 (251)
T ss_pred             EEEEe--eCCEEEEEeCCCC-cCCCCHHHHHHHHHHHHHHHcCCCceEEEEECCC-CceecCcChhhhCch---hHHHH-
Confidence            66776  7899999999997 5999999999999999999999999999999999 899999999875321   11111 


Q ss_pred             HhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          151 RLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       151 ~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ...+.+++.++.++|||+||+|||+
T Consensus        75 ~~~~~~~~~~l~~~~kPvIaav~G~   99 (251)
T TIGR03189        75 LASLHKLVIAMLDSPVPILVAVRGQ   99 (251)
T ss_pred             HHHHHHHHHHHHhCCCCEEEEecCe
Confidence            1224567788999999999999996

This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.

>PRK08259 enoyl-CoA hydratase; Provisional

Probab=99.87  E-value=8.9e-22  Score=160.30  Aligned_cols=100  Identities=28%  Similarity=0.357  Sum_probs=79.5

Q ss_pred             cEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhh
Q 030574           70 DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENF  149 (175)
Q Consensus        70 ~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~  149 (175)
                      .+.++.  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++.......... 
T Consensus         4 ~i~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvltg~g-~~FcaG~Dl~~~~~~~~~~~~~-   79 (254)
T PRK08259          4 SVRVER--NGPVTTVILNRPEVRNAVDGPTAAALADAFRAFDADDAASVAVLWGAG-GTFCAGADLKAVGTGRGNRLHP-   79 (254)
T ss_pred             eEEEEE--ECCEEEEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCccCCcChHHHhcccchhhhh-
Confidence            477877  799999999999999999999999999999999999999999999999 8999999999875422111110 


Q ss_pred             hHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          150 GRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       150 ~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ..  ...+...+.++|||+||+|||+
T Consensus        80 ~~--~~~~~~~~~~~~kPvIaav~G~  103 (254)
T PRK08259         80 SG--DGPMGPSRMRLSKPVIAAVSGY  103 (254)
T ss_pred             hh--cchhhhHHhcCCCCEEEEECCE
Confidence            00  0111223347999999999996

>PRK03580 carnitinyl-CoA dehydratase; Provisional

Probab=99.86  E-value=1.6e-21  Score=159.26  Aligned_cols=101  Identities=31%  Similarity=0.397  Sum_probs=82.2

Q ss_pred             cEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhh
Q 030574           70 DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENF  149 (175)
Q Consensus        70 ~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~  149 (175)
                      .+.++.  +++|++|+||||+ .|+|+.+|+.+|.++++.++.|+++|+|||+|.|+++||+|+|++++........ ..
T Consensus         4 ~i~~~~--~~~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~~F~aG~Dl~~~~~~~~~~~-~~   79 (261)
T PRK03580          4 SLHTTR--NGSILEITLDRPK-ANAIDAKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEGEAPDA-DF   79 (261)
T ss_pred             eEEEEE--ECCEEEEEECCcc-ccCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecccCHHHHhccCcchh-hh
Confidence            377777  7999999999995 5999999999999999999999999999999998679999999998754322111 11


Q ss_pred             hHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          150 GRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       150 ~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .. .....+.++..+|||+||+|||+
T Consensus        80 ~~-~~~~~~~~l~~~~kPvIaav~G~  104 (261)
T PRK03580         80 GP-GGFAGLTEIFDLDKPVIAAVNGY  104 (261)
T ss_pred             hh-hhhHHHHHHHhCCCCEEEEECCe
Confidence            11 12345678899999999999996

>PLN02988 3-hydroxyisobutyryl-CoA hydrolase

Probab=99.86  E-value=1.7e-21  Score=166.79  Aligned_cols=104  Identities=29%  Similarity=0.446  Sum_probs=84.5

Q ss_pred             cccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc-cc-
Q 030574           68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY-AD-  145 (175)
Q Consensus        68 ~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~-~~-  145 (175)
                      ...|.++.  +++|++|+||||+++|+|+.+|+.+|.++|+.++.|+++++|||+|.| ++||+|+|++++..... .. 
T Consensus         8 ~~~v~~~~--~~~i~~ItLnRP~~lNALs~~m~~~L~~al~~~~~d~~v~~VVl~G~G-~~FcAGgDl~~l~~~~~~~~~   84 (381)
T PLN02988          8 QSQVLVEE--KSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHG-RAFCAGGDVAAVVRDIEQGNW   84 (381)
T ss_pred             CCceEEEE--ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCC-CCcccCcCHHHHHhhhcccch
Confidence            34588877  799999999999999999999999999999999999999999999999 89999999998753211 11 


Q ss_pred             --hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 --YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 --~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                        ...++.. .+.+...|.++|||+||+|||+
T Consensus        85 ~~~~~~f~~-~~~l~~~i~~~pKPvIa~v~G~  115 (381)
T PLN02988         85 RLGANFFSD-EYMLNYVMATYSKAQVSILNGI  115 (381)
T ss_pred             hHHHHHHHH-HHHHHHHHHHCCCCEEEEecCe
Confidence              1111221 2345567899999999999995

>PRK08252 enoyl-CoA hydratase; Provisional

Probab=99.86  E-value=2.2e-21  Score=157.89  Aligned_cols=98  Identities=32%  Similarity=0.425  Sum_probs=79.3

Q ss_pred             cEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhh
Q 030574           70 DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENF  149 (175)
Q Consensus        70 ~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~  149 (175)
                      .+.+++  +++|++|+||||+++|+|+.+|+.+|.+++++++.|+++|+|||+|.| ++||+|+|++++.......   .
T Consensus         4 ~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g-~~F~aG~Dl~~~~~~~~~~---~   77 (254)
T PRK08252          4 EVLVER--RGRVLIITINRPEARNAVNAAVAQGLAAALDELDADPDLSVGILTGAG-GTFCAGMDLKAFARGERPS---I   77 (254)
T ss_pred             eEEEEE--ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCC-CceEcCcCHHHHhcccchh---h
Confidence            477877  799999999999999999999999999999999999999999999999 8999999999875422111   1


Q ss_pred             hHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          150 GRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       150 ~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ....+..+.  ...+|||+||+|||+
T Consensus        78 ~~~~~~~~~--~~~~~kPvIaav~G~  101 (254)
T PRK08252         78 PGRGFGGLT--ERPPRKPLIAAVEGY  101 (254)
T ss_pred             hHHHHHHHH--HhcCCCCEEEEECCE
Confidence            111112222  247999999999996

>PRK07854 enoyl-CoA hydratase; Provisional

Probab=99.86  E-value=3.6e-21  Score=155.84  Aligned_cols=95  Identities=32%  Similarity=0.505  Sum_probs=79.3

Q ss_pred             EEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhh
Q 030574           71 IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFG  150 (175)
Q Consensus        71 v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~  150 (175)
                      +.++.  +++|++||||||+++|+||.+|+.+|.++++.++++ ++|+|||+|.| +.||+|+|+++...     ... .
T Consensus         2 ~~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~~-~vr~vvl~g~g-~~F~aG~Dl~~~~~-----~~~-~   71 (243)
T PRK07854          2 IGVTR--DGQVLTIELQRPERRNALNAELCEELREAVRKAVDE-SARAIVLTGQG-TVFCAGADLSGDVY-----ADD-F   71 (243)
T ss_pred             ceEEE--eCCEEEEEeCCCccccCCCHHHHHHHHHHHHHHhcC-CceEEEEECCC-CceecccCCccchh-----HHH-H
Confidence            45666  789999999999999999999999999999999865 89999999999 89999999985211     111 1


Q ss_pred             HhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          151 RLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       151 ~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ...+..++.+|.++|||+||+|||+
T Consensus        72 ~~~~~~~~~~l~~~~kP~Iaav~G~   96 (243)
T PRK07854         72 PDALIEMLHAIDAAPVPVIAAINGP   96 (243)
T ss_pred             HHHHHHHHHHHHhCCCCEEEEecCc
Confidence            1224567788999999999999996

>KOG1681 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]

Probab=99.85  E-value=7.5e-22  Score=155.85  Aligned_cols=109  Identities=28%  Similarity=0.355  Sum_probs=85.9

Q ss_pred             CCcccEEEEE-EeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccC---
Q 030574           66 TEFTDIIYEK-AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRD---  141 (175)
Q Consensus        66 ~~~~~v~~e~-~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~---  141 (175)
                      ..|+.+.+.. ..+.-|.++.||||.|+|+|+..||.|+.++|+.+.+||++++|||.|+| |.||+|.|+..+...   
T Consensus        16 ~s~ksl~v~vk~~~~~V~hv~lnRPsk~Nal~~~~w~E~~~cf~~l~~dpdcr~iilsg~G-KhFcaGIDl~~~~~~~~~   94 (292)
T KOG1681|consen   16 HSYKSLEVSVKSAQPFVYHVQLNRPSKLNALNKVFWREFKECFDSLDRDPDCRAIILSGAG-KHFCAGIDLNDMASDRIL   94 (292)
T ss_pred             cccceeeeeecCCCCeEEEEEecCcchhhhhhHHHHHHHHHHHHhhccCCCceEEEEecCC-cceecccCcchhhhhhcc
Confidence            3455444431 13677999999999999999999999999999999999999999999999 999999998754322   


Q ss_pred             ---Cccch-----hhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          142 ---GYADY-----ENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       142 ---~~~~~-----~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                         +....     .......+|+.+..|.+||||+||+|||+
T Consensus        95 ~~~~dd~aR~g~~lrr~Ik~~Q~~~t~ie~CpKPVIaavHg~  136 (292)
T KOG1681|consen   95 QPEGDDVARKGRSLRRIIKRYQDTFTAIERCPKPVIAAVHGA  136 (292)
T ss_pred             ccccchHhhhhHHHHHHHHHHHHHHHHHHhCChhHHHHHHhh
Confidence               11111     11223346888999999999999999985

>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix

Probab=99.85  E-value=1.5e-21  Score=157.70  Aligned_cols=99  Identities=34%  Similarity=0.572  Sum_probs=85.5

Q ss_pred             EEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHh
Q 030574           73 YEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRL  152 (175)
Q Consensus        73 ~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~  152 (175)
                      ++.  +++|++|+||||++.|+||.+|+.+|.++|+.++.|+++|+||++|.+ +.||+|+|++++... ..........
T Consensus         2 ~~~--~~~v~~i~ln~p~~~N~l~~~~~~~l~~~l~~~~~d~~v~vvv~~~~~-~~F~~G~Dl~~~~~~-~~~~~~~~~~   77 (245)
T PF00378_consen    2 YEI--EDGVATITLNRPEKRNALNPEMLDELEEALDEAEADPDVKVVVISGGG-KAFCAGADLKEFLNS-DEEEAREFFR   77 (245)
T ss_dssp             EEE--ETTEEEEEEECGGGTTEBSHHHHHHHHHHHHHHHHSTTESEEEEEEST-SESBESB-HHHHHHH-HHHHHHHHHH
T ss_pred             EEE--ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhcCCccEEEEeecc-cccccccchhhhhcc-ccccccccch
Confidence            555  899999999999999999999999999999999999999999999998 899999999988765 2222233344


Q ss_pred             hHHHHHHHHhcCCCcEEEEeeCC
Q 030574          153 NVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       153 ~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .++.++.++..+|||+||+|||+
T Consensus        78 ~~~~l~~~l~~~~kp~Iaav~G~  100 (245)
T PF00378_consen   78 RFQELLSRLANFPKPTIAAVNGH  100 (245)
T ss_dssp             HHHHHHHHHHHSSSEEEEEESSE
T ss_pred             hhccccccchhhhhheeeccccc
Confidence            57889999999999999999995

Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A ....

>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional

Probab=99.85  E-value=1.4e-20  Score=155.29  Aligned_cols=106  Identities=14%  Similarity=0.120  Sum_probs=83.5

Q ss_pred             cccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCC-CcccCCCCCCccccCCccc-
Q 030574           68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT-EAFCSGGDQALRTRDGYAD-  145 (175)
Q Consensus        68 ~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~-~~FcaG~Dl~~~~~~~~~~-  145 (175)
                      .+.|.++.. +++|++||||||+ .|+|+.+|+.+|.++++.+++|+++|+|||||.|+ ++||+|+|++++....... 
T Consensus        10 ~~~i~~~~~-~~~Va~itlnr~~-~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~~~FcaG~Dl~~~~~~~~~~~   87 (278)
T PLN03214         10 TPGVRVDRR-PGGIAVVWLAKEP-VNSMTLAMWRSLDDALTALENDPTVRGVVFASGLRRDVFTAGNDIAELYAPKTSAA   87 (278)
T ss_pred             CCceEEEEc-CCCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHcCCCceEEEEeCCCCCCcccCccCHHHHhccccchH
Confidence            346888763 5889999999985 69999999999999999999999999999999873 6999999999865321111 


Q ss_pred             hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ...........++.+|.++|||+||+|||+
T Consensus        88 ~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~  117 (278)
T PLN03214         88 RYAEFWLTQTTFLVRLLRSRLATVCAIRGA  117 (278)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCEEEEEcCc
Confidence            111111123456778999999999999996

>PRK08788 enoyl-CoA hydratase; Validated

Probab=99.84  E-value=2.1e-20  Score=154.83  Aligned_cols=110  Identities=15%  Similarity=0.129  Sum_probs=81.1

Q ss_pred             CCCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhc-----CCCceEEEEecCCCCcccCCCCCCccc
Q 030574           65 GTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARD-----DSSVGVIILTGKGTEAFCSGGDQALRT  139 (175)
Q Consensus        65 ~~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~-----d~~vkvvVltG~g~~~FcaG~Dl~~~~  139 (175)
                      ..+++.++++.+.+++|++|+|| |+++|+|+.+|+.+|.+++++++.     |+++|+|||+|.+++.||+|+|++++.
T Consensus        11 ~~~~~~~~i~~e~~~~ia~itl~-p~~~Nal~~~~~~eL~~al~~~~~~~~~~d~~vrvVVltg~~gk~FcaG~Dl~~~~   89 (287)
T PRK08788         11 AGELSQLRVYYEEERNVMWMYMR-AQPRPCFNLELLDDIMNLQRAIRQRLDDSGLPVDFWVLASDVPGVFNLGGDLALFA   89 (287)
T ss_pred             ccccCceEEEEEccCCEEEEEEC-CCCCCCCCHHHHHHHHHHHHHHHhhccCCCCCeEEEEEEcCCCCceEeCcCHHHHh
Confidence            34556666655558999999995 999999999999999999999998     899999999999338999999999864


Q ss_pred             cCC-ccchhhh--hHhhHHHHHHHHh---cCCCcEEEEeeCC
Q 030574          140 RDG-YADYENF--GRLNVLDLQVQIR---RLPKPVIAMVHLP  175 (175)
Q Consensus       140 ~~~-~~~~~~~--~~~~~~~~~~~i~---~~~kPvIAaV~G~  175 (175)
                      ... .......  ....+.+.+.++.   .+|||+||+|||+
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pkPvIAaV~G~  131 (287)
T PRK08788         90 ELIRAGDRDALLAYARACVDGVHAFHRGFGAGAISIALVQGD  131 (287)
T ss_pred             hhccccchHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECCe
Confidence            311 1111111  1111223333333   7999999999996

>PLN02267 enoyl-CoA hydratase/isomerase family protein

Probab=99.84  E-value=1.7e-20  Score=151.62  Aligned_cols=101  Identities=22%  Similarity=0.308  Sum_probs=80.5

Q ss_pred             EEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCce-EEEEecCCCCcccCCCCCCccccCCc-cchhh
Q 030574           71 IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVG-VIILTGKGTEAFCSGGDQALRTRDGY-ADYEN  148 (175)
Q Consensus        71 v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vk-vvVltG~g~~~FcaG~Dl~~~~~~~~-~~~~~  148 (175)
                      +.++.  +++|++|+||||++ |+|+.+|+.+|.++++.++.|++++ +||++|.| +.||+|+|++++..... .....
T Consensus         2 ~~~~~--~~~v~~i~Lnrp~~-Nal~~~~~~eL~~al~~~~~d~~~~~vVV~~g~g-~~FsaG~Dl~~~~~~~~~~~~~~   77 (239)
T PLN02267          2 CTLEK--RGNLFILTLTGDGE-HRLNPTLIDSIRSALRQVKSQATPGSVLITTAEG-KFFSNGFDLAWAQAAGSAPSRLH   77 (239)
T ss_pred             ceeEe--cCCEEEEEeCCCCc-CcCCHHHHHHHHHHHHHHHhCCCCceEEEEcCCC-CceeCCcCHHHHhccccCHHHHH
Confidence            45665  78999999999986 9999999999999999999998865 77789988 89999999997643211 11111


Q ss_pred             hhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          149 FGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       149 ~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .....+.+++.+|.++|||+||+|||+
T Consensus        78 ~~~~~~~~~~~~l~~~~kPvIAaV~G~  104 (239)
T PLN02267         78 LMVAKLRPLVADLISLPMPTIAAVTGH  104 (239)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEECCc
Confidence            122235677888999999999999996

>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase

Probab=99.83  E-value=2.2e-20  Score=157.62  Aligned_cols=95  Identities=27%  Similarity=0.320  Sum_probs=77.1

Q ss_pred             EEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc--cchhhhhHhhHHHHH
Q 030574           81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY--ADYENFGRLNVLDLQ  158 (175)
Q Consensus        81 V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~--~~~~~~~~~~~~~~~  158 (175)
                      +++|+||||+++|+|+.+|+.+|.++++.++.|+++++|||||.|+++||+|+|++++.....  ..........+++++
T Consensus        38 ~A~ItLNRP~k~NAls~~ml~eL~~al~~~~~D~dVrvVVLTG~G~kaFCAG~DLke~~~~~~~~~~~~~~~~~~~~~l~  117 (360)
T TIGR03200        38 NAWIILDNPKQYNSYTTDMVKAIILAFRRASSDRDVVAVVFTAVGDKAFCTGGNTKEYAEYYAGNPQEYRQYMRLFNDMV  117 (360)
T ss_pred             EEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCCcCHHHHhhhcccChhHHHHHHHHHHHHH
Confidence            456999999999999999999999999999999999999999999669999999998754211  111111112245677


Q ss_pred             HHHhcCCCcEEEEeeCC
Q 030574          159 VQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       159 ~~i~~~~kPvIAaV~G~  175 (175)
                      .+|..|+|||||+|||+
T Consensus       118 ~~i~~~pKPVIAAVnG~  134 (360)
T TIGR03200       118 SAILGCDKPVICRVNGM  134 (360)
T ss_pred             HHHHhCCCCEEEEECCE
Confidence            78999999999999995

Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK06213 enoyl-CoA hydratase; Provisional

Probab=99.83  E-value=5.3e-20  Score=147.61  Aligned_cols=98  Identities=24%  Similarity=0.305  Sum_probs=80.2

Q ss_pred             cEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhh
Q 030574           70 DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENF  149 (175)
Q Consensus        70 ~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~  149 (175)
                      .+.++.  +++|++|+|||| +.|+|+.+|+.+|.++++.++  +++++||++|.| ++||+|+|++++... ...... 
T Consensus         4 ~i~~~~--~~~v~~itln~~-~~Nal~~~~~~~l~~~l~~~~--~~~~vvvl~g~g-~~F~~G~Dl~~~~~~-~~~~~~-   75 (229)
T PRK06213          4 LVSYTL--EDGVATITLDDG-KVNALSPAMIDALNAALDQAE--DDRAVVVITGQP-GIFSGGFDLKVMTSG-AQAAIA-   75 (229)
T ss_pred             eEEEEe--cCCEEEEEeCCC-CCCCCCHHHHHHHHHHHHHhh--ccCcEEEEeCCC-CceEcCcCHHHHhcc-hHhHHH-
Confidence            477877  799999999998 569999999999999999998  457999999999 999999999987542 111111 


Q ss_pred             hHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          150 GRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       150 ~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ....+.+++.++.++|||+||+|||+
T Consensus        76 ~~~~~~~l~~~l~~~~kPvIAav~G~  101 (229)
T PRK06213         76 LLTAGSTLARRLLSHPKPVIVACTGH  101 (229)
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEEcCe
Confidence            22234667888999999999999996

>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=99.83  E-value=5e-20  Score=168.79  Aligned_cols=104  Identities=18%  Similarity=0.173  Sum_probs=85.2

Q ss_pred             cEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCC--ccchh
Q 030574           70 DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDG--YADYE  147 (175)
Q Consensus        70 ~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~--~~~~~  147 (175)
                      .+.++.. +++|++||||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++....  .....
T Consensus         7 ~i~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~~~~~~~~   84 (715)
T PRK11730          7 TLQVDWL-EDGIAELVFDAPGSVNKLDRATLASLGEALDALEAQSDLKGLLLTSAK-DAFIVGADITEFLSLFAAPEEEL   84 (715)
T ss_pred             eEEEEEc-CCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCcEEEEEECCC-CccccCcCHHHHhhhccCCHHHH
Confidence            4677643 789999999999999999999999999999999999999999999999 8999999999875321  11111


Q ss_pred             hhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          148 NFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       148 ~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ......+++++.+|..||||+||+|||+
T Consensus        85 ~~~~~~~~~~~~~i~~~~kPvIAav~G~  112 (715)
T PRK11730         85 SQWLHFANSIFNRLEDLPVPTVAAINGY  112 (715)
T ss_pred             HHHHHHHHHHHHHHHcCCCCEEEEECCE
Confidence            1122235667888999999999999996

>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily

Probab=99.82  E-value=8.5e-20  Score=142.02  Aligned_cols=101  Identities=38%  Similarity=0.557  Sum_probs=86.0

Q ss_pred             EEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccch-hhhh
Q 030574           72 IYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADY-ENFG  150 (175)
Q Consensus        72 ~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~-~~~~  150 (175)
                      .+++  +++|++|+||+|++.|+||.+|+++|.++++.++.|+++++|||+|.+ +.||+|+|++++........ ....
T Consensus         2 ~~~~--~~~i~~i~l~~~~~~N~~~~~~~~~l~~~l~~~~~d~~~~~vvl~~~~-~~Fs~G~dl~~~~~~~~~~~~~~~~   78 (195)
T cd06558           2 LVER--DGGVATITLNRPEKRNALSLEMLDELAAALDEAEADPDVRVVVLTGAG-KAFCAGADLKELAALSDAGEEARAF   78 (195)
T ss_pred             EEEE--ECCEEEEEECCccccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CceEeCcCHHHHhcccccchhHHHH
Confidence            4566  789999999999989999999999999999999999999999999997 99999999998876443321 1223


Q ss_pred             HhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          151 RLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       151 ~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ...+++++.++..++||+||+|||+
T Consensus        79 ~~~~~~~~~~i~~~~~p~Ia~v~G~  103 (195)
T cd06558          79 IRELQELLRALLRLPKPVIAAVNGA  103 (195)
T ss_pred             HHHHHHHHHHHHcCCCCEEEEECCe
Confidence            3346788889999999999999995

This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.

>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase

Probab=99.81  E-value=1.9e-19  Score=159.99  Aligned_cols=109  Identities=17%  Similarity=0.194  Sum_probs=84.8

Q ss_pred             CCCcccEEEEEEeCCCEEEEEEcCCC----------CCCCCCHHHHHHHHHHHHHhh-cCCCceEEEEecCCCCcccCCC
Q 030574           65 GTEFTDIIYEKAVGEGIAKITINRPD----------RRNAFRPHTVKELIRAFNDAR-DDSSVGVIILTGKGTEAFCSGG  133 (175)
Q Consensus        65 ~~~~~~v~~e~~~~~~V~~ItLnrp~----------~~Nal~~~~~~eL~~al~~~~-~d~~vkvvVltG~g~~~FcaG~  133 (175)
                      .++++.|.++.  +++|++|+||||+          |+|+|+.+|+.+|.++|+.++ .|+++|+|||||.++++||+|+
T Consensus         7 ~~~~~~v~~~~--~g~Va~ItLnrpe~~~~~p~~~~k~Nal~~~~l~eL~~al~~~~~~d~~vRvVVLtg~~Gk~FcaG~   84 (546)
T TIGR03222         7 PSQYRHWKLTF--DGPVATLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDAVQRIRFEHPEVRTVVMTSGKDRVFCSGA   84 (546)
T ss_pred             CCCCceEEEEe--eCCEEEEEEecccccccCccccccCCCCCHHHHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcCCc
Confidence            35677899988  7999999999976          899999999999999999999 7899999999998548999999


Q ss_pred             CCCccccCCccchhhh---hHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          134 DQALRTRDGYADYENF---GRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       134 Dl~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      |++++...........   .......+...+..||||+||+|||+
T Consensus        85 DL~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~pkPvIAAVnG~  129 (546)
T TIGR03222        85 NIFMLGLSTHAWKVNFCKFTNETRNGIEDSSRHSGLKFLAAVNGT  129 (546)
T ss_pred             CHHHHhccccchhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence            9998753211111111   11111234456788999999999996

In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.

>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase

Probab=99.81  E-value=2.7e-19  Score=159.05  Aligned_cols=110  Identities=15%  Similarity=0.178  Sum_probs=84.9

Q ss_pred             CCCCcccEEEEEEeCCCEEEEEEcCCCCC-------------CCCCHHHHHHHHHHHHHhh-cCCCceEEEEecCCCCc-
Q 030574           64 SGTEFTDIIYEKAVGEGIAKITINRPDRR-------------NAFRPHTVKELIRAFNDAR-DDSSVGVIILTGKGTEA-  128 (175)
Q Consensus        64 ~~~~~~~v~~e~~~~~~V~~ItLnrp~~~-------------Nal~~~~~~eL~~al~~~~-~d~~vkvvVltG~g~~~-  128 (175)
                      .+..|.+|.+..+.+++|++||||||+++             |+|+.+|+.+|.+++..++ +|+++|+|||||.| +. 
T Consensus       251 ~~~~~~~~~v~~~~~~~va~itlnrP~~~~~~~~~~~~~~~~Nal~~~~~~~L~~a~~~~~~~d~~vr~vVl~g~G-~~~  329 (546)
T TIGR03222       251 DGVRYPTVDVAIDRAARTATITLKGPKAAQPADIAAIVAQGANWWPLKLARELDDAILHLRTNELDIGLWVFRTQG-DAE  329 (546)
T ss_pred             CCcceeeEEEEEeccCCEEEEEecChhhcCccccccccccccCcCCHHHHHHHHHHHHHHhhCCCCeEEEEEEcCC-CCc
Confidence            34556666655444899999999999999             9999999999999999998 56999999999999 66 


Q ss_pred             ccCCCCCCccccCCccchhhhhHhhHHHHHHHHhcCCCcEEEEe-eCC
Q 030574          129 FCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV-HLP  175 (175)
Q Consensus       129 FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV-~G~  175 (175)
                      ||+|+|++.............. ...+.++.+|.+++||+||+| ||+
T Consensus       330 F~aG~Dl~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~kpviAav~~G~  376 (546)
T TIGR03222       330 LVLAADALLEAHKDHWFVRETI-GYLRRTLARLDVSSRSLFALIEPGS  376 (546)
T ss_pred             eecCcCccccccccchhHHHHH-HHHHHHHHHHHcCCCCEEEEECCCe
Confidence            9999999843211111111111 223457788999999999999 896

In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.

>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=99.81  E-value=2.2e-19  Score=164.41  Aligned_cols=104  Identities=20%  Similarity=0.303  Sum_probs=84.9

Q ss_pred             EEEEEEeCCCEEEEEEcCC-CCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhh
Q 030574           71 IIYEKAVGEGIAKITINRP-DRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENF  149 (175)
Q Consensus        71 v~~e~~~~~~V~~ItLnrp-~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~  149 (175)
                      +.++.. +++|++|+|||| +++|+|+.+|+.+|.++++.++.|+++|+|||+|.++++||+|+|++++...........
T Consensus         7 ~~~~~~-~~~va~itlnrp~~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~~~~~~~F~aG~Dl~~~~~~~~~~~~~~   85 (708)
T PRK11154          7 FTLNVR-EDNIAVITIDVPGEKMNTLKAEFAEQVRAILKQLREDKELKGVVFISGKPDNFIAGADINMLAACKTAQEAEA   85 (708)
T ss_pred             EEEEEc-CCCEEEEEECCCCCCCcCCCHHHHHHHHHHHHHHHhCCCceEEEEecCCCCCcccCcChHHhhccCCHHHHHH
Confidence            566664 789999999999 689999999999999999999999999999999976589999999998754222111112


Q ss_pred             hHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          150 GRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       150 ~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ....++.++.+|.+||||+||+|||+
T Consensus        86 ~~~~~~~~~~~i~~~~kPvIAaV~G~  111 (708)
T PRK11154         86 LARQGQQLFAEIEALPIPVVAAIHGA  111 (708)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEECCe
Confidence            22234667889999999999999996

>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB

Probab=99.80  E-value=2.5e-19  Score=164.15  Aligned_cols=104  Identities=23%  Similarity=0.212  Sum_probs=85.8

Q ss_pred             cEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCC--ccchh
Q 030574           70 DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDG--YADYE  147 (175)
Q Consensus        70 ~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~--~~~~~  147 (175)
                      .+.++.. +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++....  .....
T Consensus         7 ~i~~~~~-~~gva~Itlnrp~~~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~~~   84 (714)
T TIGR02437         7 TIQVTAL-EDGIAELKFDAPGSVNKFDRATLASLDQALDAIKAQSSLKGVILTSGK-DAFIVGADITEFLGLFALPDAEL   84 (714)
T ss_pred             eEEEEEc-cCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CccccCcCHHHHhhcccCCHHHH
Confidence            5777754 789999999999999999999999999999999999999999999999 8999999999875421  11111


Q ss_pred             hhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          148 NFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       148 ~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .......++++.+|..||||+||+|||+
T Consensus        85 ~~~~~~~~~~~~~i~~~pkPvIAai~G~  112 (714)
T TIGR02437        85 IQWLLFANSIFNKLEDLPVPTVAAINGI  112 (714)
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence            1122235677889999999999999996

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.

>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional

Probab=99.80  E-value=8.2e-19  Score=156.25  Aligned_cols=111  Identities=16%  Similarity=0.180  Sum_probs=85.8

Q ss_pred             CCCCcccEEEEEEeCCCEEEEEEcCCCCC-------------CCCCHHHHHHHHHHHHHhhc-CCCceEEEEecCCCCcc
Q 030574           64 SGTEFTDIIYEKAVGEGIAKITINRPDRR-------------NAFRPHTVKELIRAFNDARD-DSSVGVIILTGKGTEAF  129 (175)
Q Consensus        64 ~~~~~~~v~~e~~~~~~V~~ItLnrp~~~-------------Nal~~~~~~eL~~al~~~~~-d~~vkvvVltG~g~~~F  129 (175)
                      .+..|.+|.++.+.+++|++||||||+++             |+|+.+|+.+|.++++.++. |+++|+|||||.|+++|
T Consensus       255 ~~~~~~~~~v~~~~~~~va~itlnrP~~~Na~~~~~~~~~~~Nal~~~~~~eL~~al~~~~~~d~~vr~vVltg~G~~~F  334 (550)
T PRK08184        255 DGLRYRHVDVEIDRAARTATITVKAPTAAQPADIAGIVAAGAAWWPLQMARELDDAILHLRTNELDIGTWVLKTEGDAAA  334 (550)
T ss_pred             CceeeEEEEEEEEccCCEEEEEEeCcccccccccccccccccccCCHHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCCcE
Confidence            35677777776654789999999999998             68999999999999999985 79999999999983399


Q ss_pred             cCCCCCCccccCCccchhhhhHhhHHHHHHHHhcCCCcEEEEee-CC
Q 030574          130 CSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH-LP  175 (175)
Q Consensus       130 caG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~-G~  175 (175)
                      |+|+|++............ ....++.++.+|.++|||+||+|| |+
T Consensus       335 ~aG~Dl~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~kPvIAaV~~G~  380 (550)
T PRK08184        335 VLAADATLLAHKDHWLVRE-TRGYLRRTLKRLDVTSRSLFALIEPGS  380 (550)
T ss_pred             EeCCChhhhcccchHHHHH-HHHHHHHHHHHHHhCCCCEEEEECCCc
Confidence            9999987432211101111 112345567789999999999997 96

>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial

Probab=99.80  E-value=3.3e-19  Score=163.77  Aligned_cols=107  Identities=18%  Similarity=0.258  Sum_probs=87.4

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEE-EEecCCCCcccCCCCCCccccCCc
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPD-RRNAFRPHTVKELIRAFNDARDDSSVGVI-ILTGKGTEAFCSGGDQALRTRDGY  143 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~-~~Nal~~~~~~eL~~al~~~~~d~~vkvv-VltG~g~~~FcaG~Dl~~~~~~~~  143 (175)
                      +.++.+.++.  +++|++|+||||+ +.|+|+.+|+.+|.++++.++.|+++|+| |++|.| ++||+|+||+++.....
T Consensus        10 ~~~~~~~~~~--~~gVa~itlnrP~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVvltg~g-~~F~aG~Dl~~~~~~~~   86 (737)
T TIGR02441        10 MARTHRHYEV--KGDVAVVKIDSPNSKVNTLSKELFAEFKEVMNELWTNEAIKSAVLISGKP-GSFVAGADIQMIAACKT   86 (737)
T ss_pred             CCCCeEEEEE--ECCEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHhhCCCCEEEEEEECCC-CcceeCcCHHHHhccCC
Confidence            4556788887  7999999999998 58999999999999999999999999965 579999 89999999998864222


Q ss_pred             cchhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          144 ADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       144 ~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ..........+++++.+|.+++||+||+|||+
T Consensus        87 ~~~~~~~~~~~~~l~~~i~~~~kPvIAav~G~  118 (737)
T TIGR02441        87 AQEVTQLSQEGQEMFERIEKSQKPIVAAISGS  118 (737)
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence            11111222335678889999999999999996

Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).

>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional

Probab=99.80  E-value=5.8e-19  Score=157.21  Aligned_cols=109  Identities=18%  Similarity=0.201  Sum_probs=84.8

Q ss_pred             CCCcccEEEEEEeCCCEEEEEEcCC-------C---CCCCCCHHHHHHHHHHHHHhh-cCCCceEEEEecCCCCcccCCC
Q 030574           65 GTEFTDIIYEKAVGEGIAKITINRP-------D---RRNAFRPHTVKELIRAFNDAR-DDSSVGVIILTGKGTEAFCSGG  133 (175)
Q Consensus        65 ~~~~~~v~~e~~~~~~V~~ItLnrp-------~---~~Nal~~~~~~eL~~al~~~~-~d~~vkvvVltG~g~~~FcaG~  133 (175)
                      .+.++.+.++.  +++|++|+||||       +   ++|+|+.+|+.+|.++++.++ .|+++++|||+|.++++||+|+
T Consensus        11 ~~~~~~~~~e~--~~~Va~ItLnrpe~~~~rP~~~~~~Nal~~~m~~eL~~al~~~~~~d~~vrvVVLtg~ggk~FcaG~   88 (550)
T PRK08184         11 PSQYRHWKLSF--DGPVATLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDALQRIRFEHPEVRTVVVTSAKDRVFCSGA   88 (550)
T ss_pred             CCCCceEEEEe--eCCEEEEEEcCccccccCcccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCcc
Confidence            36788899998  799999999965       4   899999999999999999999 7899999999998658999999


Q ss_pred             CCCccccCCccchhhhh---HhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          134 DQALRTRDGYADYENFG---RLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       134 Dl~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      |++++............   ......+..++.++|||+||+|||+
T Consensus        89 DL~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~pkPvIAAVnG~  133 (550)
T PRK08184         89 NIFMLGGSSHAWKVNFCKFTNETRNGIEDSSRHSGLKFIAAVNGT  133 (550)
T ss_pred             CHHhHhccccchhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence            99987542211111111   1111224456788999999999996

>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ

Probab=99.79  E-value=6.6e-19  Score=161.08  Aligned_cols=97  Identities=24%  Similarity=0.376  Sum_probs=79.6

Q ss_pred             CCCEEEEEEcCC-CCCCCCCHHHHHHHHHHHHHhhcCCCceEEEE-ecCCCCcccCCCCCCccccCCccchhhhhHhhHH
Q 030574           78 GEGIAKITINRP-DRRNAFRPHTVKELIRAFNDARDDSSVGVIIL-TGKGTEAFCSGGDQALRTRDGYADYENFGRLNVL  155 (175)
Q Consensus        78 ~~~V~~ItLnrp-~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVl-tG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~  155 (175)
                      +++|++|||||| +++|+||.+|+.+|.++|+.++.|+++|+||| +|.| ++||+|+|++++...............++
T Consensus         8 ~~~Va~itlnrp~~~~Nal~~~~~~eL~~~l~~~~~d~~vr~VVl~~g~g-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~   86 (699)
T TIGR02440         8 EDGIAILTIDVPGEKMNTLKAEFADQVSEILSQLKRDKSIRGLVLVSGKP-DNFIAGADISMLAACQTAGEAKALAQQGQ   86 (699)
T ss_pred             CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-CceeeccCchhhhccCChhHHHHHHHHHH
Confidence            789999999999 68999999999999999999999999999987 5777 89999999998754221111111122346


Q ss_pred             HHHHHHhcCCCcEEEEeeCC
Q 030574          156 DLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       156 ~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .++.+|.++|||+||+|||+
T Consensus        87 ~~~~~l~~~~kPvIAaVnG~  106 (699)
T TIGR02440        87 VLFAELEALPIPVVAAIHGA  106 (699)
T ss_pred             HHHHHHHhCCCCEEEEECCE
Confidence            67888999999999999996

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.

>KOG1684 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]

Probab=99.75  E-value=6.4e-18  Score=140.95  Aligned_cols=103  Identities=26%  Similarity=0.371  Sum_probs=87.7

Q ss_pred             ccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCcccc---CCcc-
Q 030574           69 TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR---DGYA-  144 (175)
Q Consensus        69 ~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~---~~~~-  144 (175)
                      ..|.++.  .+....||||||+++||||.+|+..+.-.+..++.++.+++||+.|.++++||||+|++....   .+.. 
T Consensus        38 ~~VL~e~--~~~~r~itLNRPKaLNAlnleMv~~~~~~L~~we~s~~~k~vIlkgs~~raFCAGgDI~~~ae~~~d~~~~  115 (401)
T KOG1684|consen   38 DQVLVEG--KGCARVITLNRPKALNALNLEMVLSIYPKLVEWEKSPLVKLVILKGSGGRAFCAGGDIKAVAESIKDKETP  115 (401)
T ss_pred             CceEEec--CCceeEEEecCchhhccccHHHHHHHHHHHHhhccCCCceEEEEecCCCceeecCccHHHHHHHhhcCCch
Confidence            4688988  899999999999999999999999999999999999999999999998899999999985433   2222 


Q ss_pred             chhhhhHhhHHHHHHHHhcCCCcEEEEeeC
Q 030574          145 DYENFGRLNVLDLQVQIRRLPKPVIAMVHL  174 (175)
Q Consensus       145 ~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G  174 (175)
                      ....++.. -+.+...|.++.||+||.+||
T Consensus       116 ~~~~fF~~-eYsl~~~igtY~KP~ValmdG  144 (401)
T KOG1684|consen  116 EVKKFFTE-EYSLNHLIGTYLKPYVALMDG  144 (401)
T ss_pred             HHHHHHHH-HHHHHHHHHHhcCceEEEeec
Confidence            22334443 467788999999999999998

>KOG0016 consensus Enoyl-CoA hydratase/isomerase [Lipid transport and metabolism]

Probab=99.74  E-value=2.2e-17  Score=132.52  Aligned_cols=108  Identities=29%  Similarity=0.434  Sum_probs=89.8

Q ss_pred             CCCcccEEEEEEeCCCEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc
Q 030574           65 GTEFTDIIYEKAVGEGIAKITIN-RPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY  143 (175)
Q Consensus        65 ~~~~~~v~~e~~~~~~V~~ItLn-rp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~  143 (175)
                      .+.+..+.+++  +||+.+|.++ ||++.|+++.+++.++..+++...+|+++..++++|.| ++||+|.|+..+.....
T Consensus         3 ~~~~~~~vv~~--~~g~~~I~~~~~Pkk~Nal~~e~y~~i~~al~~a~~dds~~~tv~s~~G-~~f~sG~Df~~~~~~~~   79 (266)
T KOG0016|consen    3 AMRYREIVVTR--ENGPFFIALNIRPKKKNALNREDYVYIQRALEEANDDDSVSITVLSSNG-SYFCSGLDFSPFAKALD   79 (266)
T ss_pred             cccccceEEEe--cCCcEEEEecCCCcccccccHHHHHHHHHHHHHhhcccceEEEEEecCc-cEEeeccccchhhhcCC
Confidence            46788899988  8999999999 99999999999999999999999999999999999999 99999999997754322


Q ss_pred             cch------hhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          144 ADY------ENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       144 ~~~------~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .+.      .......+..+..++..++||+||.||||
T Consensus        80 ~d~~~~~~~~~~~v~~~~~~v~~fi~f~Kplia~vNGP  117 (266)
T KOG0016|consen   80 DDANEESDKASKFVKNVSCFVNTFINFPKPLVALVNGP  117 (266)
T ss_pred             CcccccchhhHHHHHHHHHHHHHHhcCCCCEEEEecCC
Confidence            221      11112223346778899999999999998

>KOG1679 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]

Probab=99.72  E-value=1.5e-17  Score=130.69  Aligned_cols=105  Identities=29%  Similarity=0.478  Sum_probs=91.3

Q ss_pred             cEEEEEE--eCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchh
Q 030574           70 DIIYEKA--VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYE  147 (175)
Q Consensus        70 ~v~~e~~--~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~  147 (175)
                      .|.+++-  .+.||..|-+|||.+.|+|..-|+++|.++|+++..|+.+|+|+|.+.-+..||+|+||++...++..+..
T Consensus        28 Ev~v~~L~g~~~GItvl~mNRpa~kNsl~r~~~~~l~~~l~~lk~D~~~RvvilrS~vpgvFCaGADLKER~~Ms~~Ev~  107 (291)
T KOG1679|consen   28 EVFVRRLTGKDEGITILNMNRPAKKNSLGRVFVKQLREVLDELKYDNKVRVVILRSLVPGVFCAGADLKERKTMSPSEVT  107 (291)
T ss_pred             eeeeeeccCCCCCeEEEecCChhhhccHHHHHHHHHHHHHHHHhhCCceeEEEEecCCCceeecCcchHhhhcCCHHHHH
Confidence            3555432  36789999999999999999999999999999999999999999999988999999999999888777665


Q ss_pred             hhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          148 NFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       148 ~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .|.. .+..++..|.++|.|+||||+|.
T Consensus       108 ~fV~-~lR~~~~dIe~Lp~P~IAAidG~  134 (291)
T KOG1679|consen  108 RFVN-GLRGLFNDIERLPQPVIAAIDGA  134 (291)
T ss_pred             HHHH-HHHHHHHHHHhCCccceehhcch
Confidence            4443 46788899999999999999984

>KOG1682 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]

Probab=99.63  E-value=1.3e-15  Score=118.95  Aligned_cols=102  Identities=25%  Similarity=0.339  Sum_probs=85.8

Q ss_pred             EEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhh
Q 030574           71 IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFG  150 (175)
Q Consensus        71 v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~  150 (175)
                      .+++.  +++|..|+|++|+|+|+|+.+|+.+|.+.+....++-++|+|||+..| +.|++|-||+++......+-....
T Consensus        34 g~~~~--~~gvR~i~l~npKk~NtLSLaM~~~Lq~~ll~d~d~~dlr~viita~G-kifSaGH~LKELt~e~g~d~haev  110 (287)
T KOG1682|consen   34 GLVKE--HNGVREITLNNPKKLNTLSLAMMCALQDALLKDKDNLDLRCVIITAQG-KIFSAGHNLKELTNEPGSDIHAEV  110 (287)
T ss_pred             ccccc--ccceeeeeecCccccchhhHHHHHHHHHHHhhcccccceeEEEEecCC-ccccccccHHHhhcCccchHHHHH
Confidence            44544  799999999999999999999999999999999888899999999999 999999999999875543322222


Q ss_pred             HhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          151 RLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       151 ~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .....++..-|+++|+|+||.|||+
T Consensus       111 Fqtc~dvmn~Irn~pVPVia~VNG~  135 (287)
T KOG1682|consen  111 FQTCTDVMNDIRNLPVPVIAKVNGY  135 (287)
T ss_pred             HHHHHHHHHHHhcCCCceEEEecch
Confidence            2235677888999999999999995

>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad

Probab=98.66  E-value=7.1e-08  Score=76.58  Aligned_cols=77  Identities=21%  Similarity=0.173  Sum_probs=56.8

Q ss_pred             EEEEEEcCC--CCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHHH
Q 030574           81 IAKITINRP--DRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQ  158 (175)
Q Consensus        81 V~~ItLnrp--~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~  158 (175)
                      |++|.++-+  ...+..+...+.+|.++|+.+..|+++++|||+     .||+|+|+..+.             .+.+.+
T Consensus         2 i~v~~~~g~i~~~~~~~~~~~~~~l~~~l~~a~~d~~v~~ivL~-----~~s~Gg~~~~~~-------------~~~~~l   63 (211)
T cd07019           2 IGVVFANGAIVDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLR-----VNSPGGSVTASE-------------VIRAEL   63 (211)
T ss_pred             EEEEEEEEEEeCCCCCCCccCHHHHHHHHHHHhhCCCceEEEEE-----EcCCCcCHHHHH-------------HHHHHH
Confidence            455555433  122333455689999999999999999999997     789999986542             123445


Q ss_pred             HHHhcCCCcEEEEeeCC
Q 030574          159 VQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       159 ~~i~~~~kPvIAaV~G~  175 (175)
                      ..+..++||+||+++|+
T Consensus        64 ~~~~~~~kpVia~v~g~   80 (211)
T cd07019          64 AAARAAGKPVVVSAGGA   80 (211)
T ss_pred             HHHHhCCCCEEEEECCe
Confidence            66788999999999985

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te

>cd07014 S49_SppA Signal peptide peptidase A

Probab=98.46  E-value=5.1e-07  Score=69.65  Aligned_cols=60  Identities=23%  Similarity=0.150  Sum_probs=47.8

Q ss_pred             HHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574           98 HTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus        98 ~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      -.+.+|.++|+.+++|+++|+|||++     ||.|+|+...             ..+.+...++.+++||+||+|+|+
T Consensus        22 ~~~~~l~~~l~~a~~d~~v~~vvl~~-----~~~gg~~~~~-------------~~~~~~i~~~~~~~kpVia~v~G~   81 (177)
T cd07014          22 VSGDTTAAQIRDARLDPKVKAIVLRV-----NSPGGSVTAS-------------EVIRAELAAARAAGKPVVASGGGN   81 (177)
T ss_pred             cCHHHHHHHHHHHhcCCCceEEEEEe-----eCCCcCHHHH-------------HHHHHHHHHHHhCCCCEEEEECCc
Confidence            35689999999999999999999986     5888876532             123445667888999999999985

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p

>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad

Probab=98.20  E-value=4e-06  Score=66.26  Aligned_cols=61  Identities=25%  Similarity=0.314  Sum_probs=49.0

Q ss_pred             HHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574           97 PHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus        97 ~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ..++.+|.++|+.++.|+++++|||.+     +|.|+|+...             ..+.+....+..++||+||+++|+
T Consensus        16 ~~~~~~l~~~l~~a~~d~~i~~ivl~~-----~s~Gg~~~~~-------------~~i~~~i~~~~~~~kpvia~v~g~   76 (208)
T cd07023          16 GIGADSLIEQLRKAREDDSVKAVVLRI-----NSPGGSVVAS-------------EEIYREIRRLRKAKKPVVASMGDV   76 (208)
T ss_pred             CCCHHHHHHHHHHHHhCCCCcEEEEEE-----ECCCCCHHHH-------------HHHHHHHHHHHhcCCcEEEEECCc
Confidence            678999999999999999999999987     3778887541             113345667788899999999984

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad

>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad

Probab=98.15  E-value=7e-06  Score=65.26  Aligned_cols=70  Identities=24%  Similarity=0.220  Sum_probs=48.1

Q ss_pred             cCCCCCCC-CCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHHHHHHhcCC
Q 030574           87 NRPDRRNA-FRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLP  165 (175)
Q Consensus        87 nrp~~~Na-l~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  165 (175)
                      +++...|+ ++..++.+|.++|+.+++|+++++|||+.     +|.|+++...             ..+.+....+.. +
T Consensus        13 ~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~i~~Vvl~~-----~s~gg~~~~~-------------~~l~~~l~~~~~-~   73 (214)
T cd07022          13 PRGSWLEASSGLTSYEGIAAAIRAALADPDVRAIVLDI-----DSPGGEVAGV-------------FELADAIRAARA-G   73 (214)
T ss_pred             CCCCcccCCCCcccHHHHHHHHHHHhhCCCCcEEEEEE-----eCCCCcHHHH-------------HHHHHHHHHHhc-C
Confidence            45555665 45689999999999999999999999975     3556544221             112222333333 5


Q ss_pred             CcEEEEeeCC
Q 030574          166 KPVIAMVHLP  175 (175)
Q Consensus       166 kPvIAaV~G~  175 (175)
                      ||+||+++|.
T Consensus        74 KpViA~v~g~   83 (214)
T cd07022          74 KPIVAFVNGL   83 (214)
T ss_pred             CCEEEEECCc
Confidence            9999999984

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.

>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad

Probab=97.59  E-value=8.7e-05  Score=59.32  Aligned_cols=62  Identities=21%  Similarity=0.191  Sum_probs=47.9

Q ss_pred             CCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHHHHHHhcCCCcEEEEeeC
Q 030574           95 FRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVHL  174 (175)
Q Consensus        95 l~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G  174 (175)
                      -+...+.+|.++|+++..|++|++|||...+ ..| +++++.++                .+....+...+||+||.++|
T Consensus        26 ~~~~~~~~l~~~l~~a~~d~~ik~vvL~~~s-~gg-~~~~~~el----------------~~~i~~~~~~~kpVia~~~~   87 (222)
T cd07018          26 SSELSLRDLLEALEKAAEDDRIKGIVLDLDG-LSG-GLAKLEEL----------------RQALERFRASGKPVIAYADG   87 (222)
T ss_pred             cCCccHHHHHHHHHHHhcCCCeEEEEEECCC-CCC-CHHHHHHH----------------HHHHHHHHHhCCeEEEEeCC
Confidence            3466789999999999999999999999988 555 55555443                23344566689999999886

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys

>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type

Probab=97.58  E-value=0.0002  Score=56.61  Aligned_cols=55  Identities=20%  Similarity=0.366  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHHHHHHhcCC--CcEEEEeeCC
Q 030574          100 VKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLP--KPVIAMVHLP  175 (175)
Q Consensus       100 ~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--kPvIAaV~G~  175 (175)
                      ..+|.++|+.+.+|+++++|||++.     |.|+++..                ..++..+|.+++  ||+||+++|.
T Consensus        15 ~~~l~~~l~~a~~d~~i~~vvl~~~-----s~Gg~~~~----------------~~~l~~~i~~~~~~kpvia~v~g~   71 (207)
T TIGR00706        15 PEDFDKKIKRIKDDKSIKALLLRIN-----SPGGTVVA----------------SEEIYEKLKKLKAKKPVVASMGGV   71 (207)
T ss_pred             HHHHHHHHHHHhhCCCccEEEEEec-----CCCCCHHH----------------HHHHHHHHHHhcCCCCEEEEECCc
Confidence            5788999999999999999999864     56665532                134455666776  9999999984

The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.

>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease

Probab=97.57  E-value=0.00015  Score=54.69  Aligned_cols=60  Identities=25%  Similarity=0.264  Sum_probs=46.8

Q ss_pred             CCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHHHHHHhcCCCcEEEEeeC
Q 030574           95 FRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVHL  174 (175)
Q Consensus        95 l~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G  174 (175)
                      ++..++.+|.+.|+.++.|+++++|+|..     +|.|+|+..                ...+...|..++||+||.++|
T Consensus         8 I~~~~~~~l~~~l~~a~~d~~~~~ivl~~-----~s~Gg~~~~----------------~~~i~~~l~~~~kpvva~~~g   66 (161)
T cd00394           8 IEDVSADQLAAQIRFAEADNSVKAIVLEV-----NTPGGRVDA----------------GMNIVDALQASRKPVIAYVGG   66 (161)
T ss_pred             EccchHHHHHHHHHHHHhCCCCceEEEEE-----ECCCcCHHH----------------HHHHHHHHHHhCCCEEEEECC
Confidence            55678999999999999999999999975     356665422                224455677889999999998


Q ss_pred             C
Q 030574          175 P  175 (175)
Q Consensus       175 ~  175 (175)
                      .
T Consensus        67 ~   67 (161)
T cd00394          67 Q   67 (161)
T ss_pred             h
Confidence            4

Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec

>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type

Probab=96.56  E-value=0.014  Score=53.26  Aligned_cols=78  Identities=17%  Similarity=0.179  Sum_probs=53.5

Q ss_pred             CCCEEEEEEcCCC--CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCC--CcccCCCCCCccccCCccchhhhhHhh
Q 030574           78 GEGIAKITINRPD--RRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT--EAFCSGGDQALRTRDGYADYENFGRLN  153 (175)
Q Consensus        78 ~~~V~~ItLnrp~--~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~--~~FcaG~Dl~~~~~~~~~~~~~~~~~~  153 (175)
                      ++.|++|.++.+=  ..+.......+.+.+.++.+..|++||+|||.-..+  ..||+                    ..
T Consensus       307 ~~~vavI~~~G~I~~~~~~~~~~~~~~~~~~l~~a~~D~~VkaIVLrinSpGGs~~as--------------------e~  366 (584)
T TIGR00705       307 QDKIGIVHLEGPIADGRDTEGNTGGDTVAALLRVARSDPDIKAVVLRINSPGGSVFAS--------------------EI  366 (584)
T ss_pred             CCeEEEEEEEEEEcCCCCcccccCHHHHHHHHHHHhhCCCceEEEEEecCCCCCHHHH--------------------HH
Confidence            6789999998762  234444444567888999999999999999985432  22332                    11


Q ss_pred             HHHHHHHHhcCCCcEEEEeeCC
Q 030574          154 VLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       154 ~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      +.+...++...+||+||.++|.
T Consensus       367 i~~~i~~~~~~gKPVva~~~g~  388 (584)
T TIGR00705       367 IRRELARAQARGKPVIVSMGAM  388 (584)
T ss_pred             HHHHHHHHHhCCCcEEEEECCc
Confidence            2233445667889999999874

E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.

>KOG1683 consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase [Lipid transport and metabolism]

Probab=96.52  E-value=0.0012  Score=56.34  Aligned_cols=94  Identities=7%  Similarity=0.036  Sum_probs=76.9

Q ss_pred             CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHHH
Q 030574           79 EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQ  158 (175)
Q Consensus        79 ~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~  158 (175)
                      .++..+.++ |+. |..|.++..+|..-++.++.+..+++.++++...+-|++|.|..+.-.... ........++++++
T Consensus        65 ~~~~~~dmv-iea-v~edl~Lk~~l~~~le~v~~~~~i~gsntSs~~~~~isa~ld~~e~vvg~h-~fspa~~m~LlEii  141 (380)
T KOG1683|consen   65 TGFANADMV-IEA-VFEDLELKHELFKSLEKVEPPKCIRGSNTSSLDINVISAGLDRPEMVVGMH-FFSPAHWMQLLEII  141 (380)
T ss_pred             cccccccee-ccc-hhhhHHHHHHHHHHHHhhcCCcceeeeccccCChHHHhhccCchhhhcccc-ccCHHHHHHHHHHH
Confidence            467778888 665 999999999999999999999889999999998889999999987654322 22233344578999


Q ss_pred             HHHhcCCCcEEEEeeCC
Q 030574          159 VQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       159 ~~i~~~~kPvIAaV~G~  175 (175)
                      .+...++.|+.+|+||+
T Consensus       142 ~~~~tS~~~iA~Ain~~  158 (380)
T KOG1683|consen  142 LALYTSKLTIATAINGG  158 (380)
T ss_pred             HhcCCCchHHHHHHhcc
Confidence            99999999999999874

>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease

Probab=96.41  E-value=0.02  Score=44.49  Aligned_cols=66  Identities=26%  Similarity=0.336  Sum_probs=43.8

Q ss_pred             EEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEe-cCCCCcccCCCCCCccccCCccchhhhhHhhHHHHHHH
Q 030574           82 AKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT-GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQ  160 (175)
Q Consensus        82 ~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVlt-G~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~  160 (175)
                      ++|.|+.     .++..+...+.++++.+++++ ++.|+|. ...      |+++..                ...++.+
T Consensus         2 ~vv~i~g-----~I~~~~~~~l~~~l~~a~~~~-~~~vvl~InSp------GG~v~~----------------~~~i~~~   53 (187)
T cd07020           2 YVLEING-----AITPATADYLERAIDQAEEGG-ADALIIELDTP------GGLLDS----------------TREIVQA   53 (187)
T ss_pred             EEEEEee-----EEChHHHHHHHHHHHHHHhCC-CCEEEEEEECC------CCCHHH----------------HHHHHHH
Confidence            4566653     366777888999999988665 7877765 322      222211                1244556


Q ss_pred             HhcCCCcEEEEee---CC
Q 030574          161 IRRLPKPVIAMVH---LP  175 (175)
Q Consensus       161 i~~~~kPvIAaV~---G~  175 (175)
                      |..++||+||+|+   |+
T Consensus        54 l~~~~kPvia~v~~~~G~   71 (187)
T cd07020          54 ILASPVPVVVYVYPSGAR   71 (187)
T ss_pred             HHhCCCCEEEEEecCCCC
Confidence            7889999999998   74

Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c

>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease

Probab=94.61  E-value=0.2  Score=38.78  Aligned_cols=60  Identities=23%  Similarity=0.339  Sum_probs=40.9

Q ss_pred             CCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHHHHHHhcCCCcEEEEee
Q 030574           94 AFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH  173 (175)
Q Consensus        94 al~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~  173 (175)
                      .+++.+...|.++|+.+++++ ++.|||.=..     -|+++                .....+...|.++++|+|+.|+
T Consensus         9 ~I~~~~~~~l~~~l~~a~~~~-~~~ivl~ins-----pGG~v----------------~~~~~I~~~l~~~~~pvva~V~   66 (178)
T cd07021           9 EIDPGLAAFVERALKEAKEEG-ADAVVLDIDT-----PGGRV----------------DSALEIVDLILNSPIPTIAYVN   66 (178)
T ss_pred             EECHHHHHHHHHHHHHHHhCC-CCeEEEEEEC-----cCCCH----------------HHHHHHHHHHHhCCCCEEEEEC
Confidence            366778888999999998876 6666653221     12211                1133556778899999999999


Q ss_pred             CC
Q 030574          174 LP  175 (175)
Q Consensus       174 G~  175 (175)
                      |.
T Consensus        67 g~   68 (178)
T cd07021          67 DR   68 (178)
T ss_pred             Cc
Confidence            84

Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall

>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]

Probab=91.00  E-value=0.91  Score=37.78  Aligned_cols=23  Identities=22%  Similarity=0.335  Sum_probs=20.2

Q ss_pred             HHHHHHHhhcCCCceEEEEecCC
Q 030574          103 LIRAFNDARDDSSVGVIILTGKG  125 (175)
Q Consensus       103 L~~al~~~~~d~~vkvvVltG~g  125 (175)
                      +.++|+.+++||+.++||+-|.-
T Consensus       188 fid~L~~fe~Dp~T~~ivmiGEi  210 (293)
T COG0074         188 FIDALEMFEADPETEAIVMIGEI  210 (293)
T ss_pred             HHHHHHHHhcCccccEEEEEecC
Confidence            35788999999999999999983

>cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease

Probab=89.22  E-value=0.76  Score=34.42  Aligned_cols=54  Identities=20%  Similarity=0.243  Sum_probs=35.4

Q ss_pred             HHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574           98 HTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus        98 ~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .+...+.+.|+.+..++.+ .+.|.+.|+ ..-+                      ...+...|..++||+|++++|.
T Consensus        15 ~~~~~~~~~l~~~~~~~~i-~l~inspGG-~~~~----------------------~~~i~~~i~~~~~pvi~~v~g~   68 (160)
T cd07016          15 VTAKEFKDALDALGDDSDI-TVRINSPGG-DVFA----------------------GLAIYNALKRHKGKVTVKIDGL   68 (160)
T ss_pred             cCHHHHHHHHHhccCCCCE-EEEEECCCC-CHHH----------------------HHHHHHHHHhcCCCEEEEEcch
Confidence            4667888888888877433 344455442 1111                      1345667888999999999984

Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which a

>PRK10949 protease 4; Provisional

Probab=88.48  E-value=2.6  Score=38.93  Aligned_cols=76  Identities=24%  Similarity=0.242  Sum_probs=47.2

Q ss_pred             CCCEEEEEEcCC-----CCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHh
Q 030574           78 GEGIAKITINRP-----DRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRL  152 (175)
Q Consensus        78 ~~~V~~ItLnrp-----~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~  152 (175)
                      ++.|++|.++-.     .....++.   +.+.+.|+++.+|++||+|||.=..+     |+.         ..    ...
T Consensus       325 ~~~Iavi~~~G~I~~g~~~~g~~~~---~~~~~~l~~a~~D~~vkaVvLrInSp-----GGs---------~~----ase  383 (618)
T PRK10949        325 GGSIAVIFANGAIMDGEETPGNVGG---DTTAAQIRDARLDPKVKAIVLRVNSP-----GGS---------VT----ASE  383 (618)
T ss_pred             CCeEEEEEEEEEEcCCCCcCCCcCH---HHHHHHHHHHHhCCCCcEEEEEecCC-----CCc---------HH----HHH
Confidence            566788877532     22234554   46678889999999999999986552     211         11    111


Q ss_pred             hHHHHHHHHhcCCCcEEEEeeC
Q 030574          153 NVLDLQVQIRRLPKPVIAMVHL  174 (175)
Q Consensus       153 ~~~~~~~~i~~~~kPvIAaV~G  174 (175)
                      .+.+...++....||+||.+.|
T Consensus       384 ~i~~~i~~~r~~gKPVvas~~~  405 (618)
T PRK10949        384 VIRAELAAARAAGKPVVVSMGG  405 (618)
T ss_pred             HHHHHHHHHHhcCCcEEEEECC
Confidence            1233344455678999998765

>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type

Probab=88.21  E-value=1.3  Score=40.48  Aligned_cols=59  Identities=19%  Similarity=0.233  Sum_probs=39.4

Q ss_pred             HHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHHHHHHhcCCCcEEEEeeC
Q 030574           99 TVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVHL  174 (175)
Q Consensus        99 ~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G  174 (175)
                      .+.++.++++.+.+|++||+|||.-.+    ..|+++..             ...+.+....+....|||||..++
T Consensus        77 ~l~~i~~~i~~A~~D~~IkgIvL~i~~----~~g~~~~~-------------~~ei~~ai~~fk~sgKpVvA~~~~  135 (584)
T TIGR00705        77 SLFDIVNAIRQAADDRRIEGLVFDLSN----FSGWDSPH-------------LVEIGSALSEFKDSGKPVYAYGTN  135 (584)
T ss_pred             CHHHHHHHHHHHhcCCCceEEEEEccC----CCCCCHHH-------------HHHHHHHHHHHHhcCCeEEEEEcc
Confidence            567899999999999999999998754    11222111             111333344555678999997654

E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.

>PF13607 Succ_CoA_lig: Succinyl-CoA ligase like flavodoxin domain; PDB: 2CSU_A

Probab=87.38  E-value=2  Score=31.85  Aligned_cols=50  Identities=20%  Similarity=0.243  Sum_probs=28.2

Q ss_pred             HHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHHHHHHhcCCCcEEEEeeC
Q 030574          102 ELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVHL  174 (175)
Q Consensus       102 eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G  174 (175)
                      .+.+.++.+.+||++++|++.-.+            +.+     ..     .+.+......+. ||+|+..-|
T Consensus        41 ~~~d~l~~~~~D~~t~~I~ly~E~------------~~d-----~~-----~f~~~~~~a~~~-KPVv~lk~G   90 (138)
T PF13607_consen   41 DFADLLEYLAEDPDTRVIVLYLEG------------IGD-----GR-----RFLEAARRAARR-KPVVVLKAG   90 (138)
T ss_dssp             -HHHHHHHHCT-SS--EEEEEES--------------S------HH-----HHHHHHHHHCCC-S-EEEEE--
T ss_pred             CHHHHHHHHhcCCCCCEEEEEccC------------CCC-----HH-----HHHHHHHHHhcC-CCEEEEeCC
Confidence            457888899999999999999876            111     11     123345555555 999998766

>TIGR00237 xseA exodeoxyribonuclease VII, large subunit

Probab=85.92  E-value=2.1  Score=37.72  Aligned_cols=58  Identities=17%  Similarity=0.240  Sum_probs=34.0

Q ss_pred             HHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHHHHHHhcCCCcEEEEe
Q 030574           97 PHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV  172 (175)
Q Consensus        97 ~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV  172 (175)
                      .+...++..+++.++..+++-+|||.-.| ++              ..   +.+..+-..+..+|+.|+.|||.+|
T Consensus       169 ~~a~~~i~~al~~~~~~~~~dviii~RGG-Gs--------------~e---DL~~Fn~e~~~rai~~~~~Pvis~i  226 (432)
T TIGR00237       169 EGAVQSIVESIELANTKNECDVLIVGRGG-GS--------------LE---DLWSFNDEKVARAIFLSKIPIISAV  226 (432)
T ss_pred             ccHHHHHHHHHHHhhcCCCCCEEEEecCC-CC--------------HH---HhhhcCcHHHHHHHHcCCCCEEEec
Confidence            34456777777777654445555543323 11              11   1122222467888999999999997

This family consist of exodeoxyribonuclease VII, large subunit XseA which catalyses exonucleolytic cleavage in either the 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. Exonuclease VII consists of one large subunit and four small subunits.

>PTZ00187 succinyl-CoA synthetase alpha subunit; Provisional

Probab=85.14  E-value=2.8  Score=35.55  Aligned_cols=24  Identities=25%  Similarity=0.272  Sum_probs=20.8

Q ss_pred             HHHHHHHHhhcCCCceEEEEecCC
Q 030574          102 ELIRAFNDARDDSSVGVIILTGKG  125 (175)
Q Consensus       102 eL~~al~~~~~d~~vkvvVltG~g  125 (175)
                      .+.+.|+.+++||+.++|++.+..
T Consensus       211 ~~~D~L~~~~~Dp~T~~Ivl~~E~  234 (317)
T PTZ00187        211 NFIDCLKLFLNDPETEGIILIGEI  234 (317)
T ss_pred             CHHHHHHHHhhCCCccEEEEEEec
Confidence            356888899999999999999985

>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3

Probab=84.71  E-value=3  Score=34.83  Aligned_cols=56  Identities=23%  Similarity=0.388  Sum_probs=35.7

Q ss_pred             HHHHHHHHHHHHhhcCC---CceEEEEe-cCCCCcccCCCCCCccccCCccchhhhhHhhHHHHHHHHhcCCCcEEEEe
Q 030574           98 HTVKELIRAFNDARDDS---SVGVIILT-GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV  172 (175)
Q Consensus        98 ~~~~eL~~al~~~~~d~---~vkvvVlt-G~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV  172 (175)
                      ....++.++++.+....   .+-+|||. |.|  +      +.           +.+..+-..+..+|..|+.|||++|
T Consensus        55 ~A~~~I~~al~~~~~~~~~~~~Dviii~RGGG--s------~e-----------DL~~FN~e~varai~~~~~PvisaI  114 (319)
T PF02601_consen   55 GAAASIVSALRKANEMGQADDFDVIIIIRGGG--S------IE-----------DLWAFNDEEVARAIAASPIPVISAI  114 (319)
T ss_pred             chHHHHHHHHHHHHhccccccccEEEEecCCC--C------hH-----------HhcccChHHHHHHHHhCCCCEEEec
Confidence            45678888888887654   45566654 433  1      11           1122122466888999999999997

1.11.6 from EC is composed of two nonidentical subunits; one large subunit and 4 small ones []. Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. The large subunit also contains the OB-fold domains (IPR004365 from INTERPRO) that bind to nucleic acids at the N terminus. This entry represents Exonuclease VII, large subunit, C-terminal. ; GO: 0008855 exodeoxyribonuclease VII activity

>PLN02522 ATP citrate (pro-S)-lyase

Probab=81.90  E-value=3.9  Score=37.64  Aligned_cols=23  Identities=17%  Similarity=0.299  Sum_probs=20.2

Q ss_pred             HHHHHHHhhcCCCceEEEEecC-C
Q 030574          103 LIRAFNDARDDSSVGVIILTGK-G  125 (175)
Q Consensus       103 L~~al~~~~~d~~vkvvVltG~-g  125 (175)
                      +.+.|+.+++||++++|++.|. |
T Consensus       210 ~~D~L~~~~~Dp~Tk~IvlygEiG  233 (608)
T PLN02522        210 LSDHVLRFNNIPQIKMIVVLGELG  233 (608)
T ss_pred             HHHHHHHHhcCCCCCEEEEEEecC
Confidence            4677888999999999999998 6

>PRK10949 protease 4; Provisional

Probab=80.80  E-value=6.9  Score=36.15  Aligned_cols=59  Identities=24%  Similarity=0.334  Sum_probs=38.2

Q ss_pred             HHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHHHHHHhcCCCcEEEEee
Q 030574           98 HTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH  173 (175)
Q Consensus        98 ~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~  173 (175)
                      -.+.++.++++.+.+|++|++|||.-.+.    .|..+.             ....+.+....+....||+||.-+
T Consensus        95 ~~l~div~~i~~Aa~D~rIkgivL~i~s~----gG~~~a-------------~~~eI~~ai~~fk~sGKpVvA~~~  153 (618)
T PRK10949         95 NSLFDIVNTIRQAKDDRNITGIVLDLKNF----AGADQP-------------SMQYIGKALREFRDSGKPVYAVGD  153 (618)
T ss_pred             ccHHHHHHHHHHHhcCCCceEEEEEeCCC----CCccHH-------------HHHHHHHHHHHHHHhCCeEEEEec
Confidence            34568899999999999999999987651    121110             011233444556667899998643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	175
2iex_A	272	Crystal Structure Of Dihydroxynapthoic Acid Synthet		1e-31
4els_A	285	Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Co		2e-30
3t88_A	289	Crystal Structure Of Escherichia Coli Menb In Compl		2e-30
3h02_A	288	2.15 Angstrom Resolution Crystal Structure Of Napht		1e-29
2uzf_A	273	Crystal Structure Of Staphylococcus Aureus 1,4-Dihy		4e-29
4eml_A	275	Synechocystis Sp. Pcc 6803 1,4-Dihydroxy-2-Naphthoy		2e-27
1rjm_A	339	Crystal Structure Of Menb (rv0548c) From Mycobacter		5e-22
3t8a_A	334	Crystal Structure Of Mycobacterium Tuberculosis Men		6e-22
1q51_A	314	Crystal Structure Of Mycobacterium Tuberculosis Men		6e-22
3tlf_A	274	Crystal Structure Of An Enoyl-Coa HydrataseISOMERAS		3e-10
3myb_A	286	Crystal Structure Of Enoyl-Coa Hydratase Mycobacter		9e-10
3he2_A	264	Crystal Structure Of Enoyl-Coa Hydratase From Mycob		3e-08
2vss_F	276	Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In C		6e-08
2vsu_F	276	A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase		6e-08
2j5i_A	276	Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase		1e-07
2j5i_I	276	Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase		1e-07
2vsu_A	276	A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase		1e-07
2j5i_B	276	Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase		1e-07
2vsu_C	275	A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase		1e-07
2vsu_E	276	A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase		1e-07
2vss_E	276	Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In C		1e-07
1jxz_A	269	Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coe		1e-07
4f47_A	278	The Structure Of Enoyl-Coa Hydratase Echa19 From My		3e-07
1uiy_A	253	Crystal Structure Of Enoyl-Coa Hydratase From Therm		3e-07
3qre_A	298	Crystal Structure Of An Enoyl-Coa Hydratase Echa12_		3e-07
3i47_A	268	Crystal Structure Of Putative Enoyl Coa HydrataseIS		3e-07
3p5m_A	255	Crystal Structure Of An Enoyl-Coa HydrataseISOMERAS		5e-07
1nzy_A	269	4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudo		5e-07
1nzy_B	269	4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudo		5e-07
1dub_A	261	2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph		9e-07
1mj3_A	260	Crystal Structure Analysis Of Rat Enoyl-Coa Hydrata		3e-06
1ey3_A	258	Structure Of Enoyl-Coa Hydratase Complexed With The		3e-06
2hw5_A	286	The Crystal Structure Of Human Enoyl-Coenzyme A (Co		4e-06
3rsi_A	265	The Structure Of A Putative Enoyl-Coa HydrataseISOM		4e-06
3t3w_A	279	Crystal Structure Of Probable Enoyl-Coa Hydratase F		5e-06
3r0o_A	273	Crystal Structure Of Carnitinyl-Coa Hydratase From		5e-06
3ome_A	282	Crystal Structure Of A Probable Enoyl-Coa Hydratase		5e-06
2ej5_A	257	Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydr		5e-06
4fzw_C	274	Crystal Structure Of The Paaf-paag Hydratase-isomer		1e-05
3qmj_A	256	Crystal Structure Of Enoyl-Coa Hydratase Echa8_6 Fr		1e-05
2f6q_A	280	The Crystal Structure Of Human Peroxisomal Delta3,		1e-05
4hdt_A	353	Crystal Structure Of A Carnitinyl-Coa Dehydratase F		2e-05
3r9t_A	267	Structure Of Echa1_1 From Mycobacterium Paratubercu		2e-05
3r9s_A	267	Structure Of A Carnitinyl-Coa Dehydratase From Myco		3e-05
2q35_A	243	Crystal Structure Of The Y82f Variant Of Ech2 Decar		5e-05
3oc7_A	267	Crystal Structure Of An Enoyl-Coa Hydratase From My		8e-05
3kqf_A	265	1.8 Angstrom Resolution Crystal Structure Of Enoyl-		1e-04
4j2u_A	365	Crystal Structure Of An Enoyl-coa Hydratase From Rh		1e-04
2vre_A	296	Crystal Structure Of Human Peroxisomal Delta3,5, De		1e-04
3swx_A	265	Crystal Structure Of A Probable Enoyl-Coa Hydratase		2e-04
3qxz_A	265	Crystal Structure Of A Probable Enoyl-Coa Hydratase		2e-04
3bpt_A	363	Crystal Structure Of Human Beta-Hydroxyisobutyryl-C		2e-04
2q2x_A	243	Crystal Structure Of The Ech2 Decarboxylase Domain		2e-04
3qka_A	261	Crystal Structure Of Enoyl-Coa Hydratase Echa5 From		2e-04
3njb_A	333	Crystal Structure Of Enoyl-Coa Hydratase From Mycob		2e-04
3sll_A	290	Crystal Structure Of A Probable Enoyl-Coa Hydratase		2e-04
1dci_A	275	Dienoyl-Coa Isomerase Length = 275		3e-04
3h81_A	278	Crystal Structure Of Enoyl-Coa Hydratase From Mycob		4e-04
3q0j_A	258	Crystal Structure Of The Mycobacterium Tuberculosis		4e-04
3pzk_A	257	Crystal Structure Of The Mycobacterium Tuberculosis		4e-04
3qyr_A	253	Crystal Structure Of Enoyl-Coa Hydratase Echa16_2 M		4e-04
3p85_A	270	Crystal Structure Enoyl-Coa Hydratase From Mycobact		5e-04
3hrx_A	254	Crystal Structure Of Phenylacetic Acid Degradation		7e-04

>pdb|2IEX|A Chain A, Crystal Structure Of Dihydroxynapthoic Acid Synthetase (Gk2873) From Geobacillus Kaustophilus Hta426 Length = 272

Iteration: 1
 Score =  132 bits (331), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/106 (64%), Positives = 78/106 (73%), Gaps = 2/106 (1%)
Query: 67  EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
           ++ DIIYE     GIAKITINRP+  NAFRP TV E+I AF  ARDDS++GVIILTG G 
Sbjct: 10  DYEDIIYETY--NGIAKITINRPEVHNAFRPKTVNEMIDAFTKARDDSNIGVIILTGAGG 67
Query: 127 EAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           +AFCSGGDQ +R   GY   +   RLNVLDLQ  IR +PKPVIAMV
Sbjct: 68  KAFCSGGDQKVRGHGGYVGEDEIPRLNVLDLQRLIRVIPKPVIAMV 113

>pdb|4ELS|A Chain A, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme A Synthases (Menb) In Complex With Bicarbonate Length = 285

Iteration: 1
 Score =  128 bits (321), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/128 (57%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Query: 46  IHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIR 105
           ++  V  HD      C E    F DI YEK+  +GIAKITINRP  RNAFRP TVKE+I+
Sbjct: 9   LYAPVEWHD------CSEG---FEDIRYEKST-DGIAKITINRPQVRNAFRPLTVKEMIQ 58
Query: 106 AFNDARDDSSVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIRRL 164
           A  DAR D ++GVIILTG G +AFCSGGDQ +R    GY D      LNVLD Q QIR  
Sbjct: 59  ALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTC 118
Query: 165 PKPVIAMV 172
           PKPV+AMV
Sbjct: 119 PKPVVAMV 126

>pdb|3T88|A Chain A, Crystal Structure Of Escherichia Coli Menb In Complex With Substrate Analogue, Osb-Ncoa Length = 289

Iteration: 1
 Score =  128 bits (321), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/128 (57%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Query: 46  IHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIR 105
           ++  V  HD      C E    F DI YEK+  +GIAKITINRP  RNAFRP TVKE+I+
Sbjct: 13  LYAPVEWHD------CSEG---FEDIRYEKST-DGIAKITINRPQVRNAFRPLTVKEMIQ 62
Query: 106 AFNDARDDSSVGVIILTGKGTEAFCSGGDQALRT-RDGYADYENFGRLNVLDLQVQIRRL 164
           A  DAR D ++GVIILTG G +AFCSGGDQ +R    GY D      LNVLD Q QIR  
Sbjct: 63  ALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTC 122
Query: 165 PKPVIAMV 172
           PKPV+AMV
Sbjct: 123 PKPVVAMV 130

>pdb|3H02|A Chain A, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate Synthase From Salmonella Typhimurium. Length = 288

Iteration: 1
 Score =  125 bits (314), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/139 (53%), Positives = 88/139 (63%), Gaps = 11/139 (7%)
Query: 35  NNASMNDSYHRIHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNA 94
           +NA +      ++  V  HD      C E    +TDI YEK+  +GIAKITINRP  RNA
Sbjct: 1   SNAXIYPDETXLYAPVEWHD------CSEG---YTDIRYEKST-DGIAKITINRPQVRNA 50
Query: 95  FRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRT-RDGYADYENFGRLN 153
           FRP TVKE I+A  DAR D +VGVIILTG+G +AFC+GGDQ +R    GY D      LN
Sbjct: 51  FRPLTVKEXIQALADARYDDNVGVIILTGEGDKAFCAGGDQKVRGDYGGYQDDSGVHHLN 110
Query: 154 VLDLQVQIRRLPKPVIAMV 172
           VLD Q QIR  PKPV+A V
Sbjct: 111 VLDFQRQIRTCPKPVVAXV 129

>pdb|2UZF|A Chain A, Crystal Structure Of Staphylococcus Aureus 1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In Complex With Acetoacetyl Coa Length = 273

Iteration: 1
 Score =  123 bits (309), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 78/111 (70%), Gaps = 2/111 (1%)
Query: 63  ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
           E+  E+ +I YE    EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LT
Sbjct: 7   ETLREYDEIKYE--FYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLT 64
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           G+G  AFCSGGDQ  R   GY   +   RLNVLDLQ  IR +PKPVIAMV 
Sbjct: 65  GEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVK 115

>pdb|4EML|A Chain A, Synechocystis Sp. Pcc 6803 1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In Complex With Bicarbonate Length = 275

Iteration: 1
 Score =  118 bits (296), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/121 (54%), Positives = 80/121 (66%), Gaps = 12/121 (9%)
Query: 57  WRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSV 116
           W IA       + DI+Y KA   GIAKI INRP +RNAFRP TV EL  AF +AR+D+ +
Sbjct: 3   WHIA-----KHYDDILYYKA--GGIAKIVINRPHKRNAFRPQTVFELYDAFCNAREDNRI 55
Query: 117 GVIILTGKGTE-----AFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAM 171
           GV++LTG G       AFCSGGDQ++R   GY D +   RLNVLDLQ  IR +PK VIA+
Sbjct: 56  GVVLLTGAGPHSDGKYAFCSGGDQSVRGEGGYIDDQGTPRLNVLDLQRLIRSMPKVVIAL 115
Query: 172 V 172
           V
Sbjct: 116 V 116

>pdb|1RJM|A Chain A, Crystal Structure Of Menb (rv0548c) From Mycobacterium Tuberculosis Length = 339

Iteration: 1
 Score =  100 bits (248), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 57/139 (41%), Positives = 76/139 (54%), Gaps = 18/139 (12%)
Query: 51  PSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDA 110
           P     WR+   +   + TDI Y + V +   ++  NRP+ RNAFRPHTV EL R  + A
Sbjct: 44  PFDAKAWRLV--DGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHA 101
Query: 111 RDDSSVGVIILTGKGTE------AFCSGGDQALRTRDGY----------ADYENFGRLNV 154
           R    VGV++LTG G        AFCSGGDQ +R R GY           D    GRL++
Sbjct: 102 RMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHI 161
Query: 155 LDLQVQIRRLPKPVIAMVH 173
           L++Q  IR +PK VI +V+
Sbjct: 162 LEVQRLIRFMPKVVICLVN 180

>pdb|3T8A|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb In Complex With Substrate Analogue, Osb-Ncoa Length = 334

Iteration: 1
 Score =  100 bits (248), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 57/139 (41%), Positives = 76/139 (54%), Gaps = 18/139 (12%)
Query: 51  PSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDA 110
           P     WR+   +   + TDI Y + V +   ++  NRP+ RNAFRPHTV EL R  + A
Sbjct: 39  PFDAKAWRLV--DGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHA 96
Query: 111 RDDSSVGVIILTGKGTE------AFCSGGDQALRTRDGY----------ADYENFGRLNV 154
           R    VGV++LTG G        AFCSGGDQ +R R GY           D    GRL++
Sbjct: 97  RMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHI 156
Query: 155 LDLQVQIRRLPKPVIAMVH 173
           L++Q  IR +PK VI +V+
Sbjct: 157 LEVQRLIRFMPKVVICLVN 175

>pdb|1Q51|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb In Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In Vitamin K2 Biosynthesis Length = 314

Iteration: 1
 Score =  100 bits (248), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 57/139 (41%), Positives = 76/139 (54%), Gaps = 18/139 (12%)
Query: 51  PSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDA 110
           P     WR+   +   + TDI Y + V +   ++  NRP+ RNAFRPHTV EL R  + A
Sbjct: 19  PFDAKAWRLV--DGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHA 76
Query: 111 RDDSSVGVIILTGKGTE------AFCSGGDQALRTRDGY----------ADYENFGRLNV 154
           R    VGV++LTG G        AFCSGGDQ +R R GY           D    GRL++
Sbjct: 77  RMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHI 136
Query: 155 LDLQVQIRRLPKPVIAMVH 173
           L++Q  IR +PK VI +V+
Sbjct: 137 LEVQRLIRFMPKVVICLVN 155

>pdb|3TLF|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Paratuberculosis Length = 274

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 68  FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
           F  I YE  V    A IT+NRPD  NA  PH + EL  A+++A +D  V ++++TG G  
Sbjct: 10  FDTIKYE--VDGHTATITLNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTG-R 66
Query: 128 AFCSGGDQALRTRDGYADYE 147
           AFCSG D      DG   YE
Sbjct: 67  AFCSGADVKEIPEDGKVIYE 86

>pdb|3MYB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium Smegm Length = 286

Iteration: 1
 Score = 59.7 bits (143), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 80  GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-QALR 138
           G+  +T+NRP   NA     +  L  AF    +D SV  ++L   G +AFC+G D + +R
Sbjct: 35  GVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASG-KAFCAGHDLKEMR 93
Query: 139 TRDGYADYEN-FGRLNVLDLQVQIRRLPKPVIAMVH 173
                  YE  F R    D+ + I+RLP PVIA VH
Sbjct: 94  AEPSREYYEKLFARCT--DVMLAIQRLPAPVIARVH 127

>pdb|3HE2|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Tuberculosis Length = 264

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 79  EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR 138
           E +  I + RP+RRNA     V+EL +A   A  D S   I+LTG+GT AFC+G D    
Sbjct: 29  EAVLTIELQRPERRNALNSQLVEELTQAIRKA-GDGSARAIVLTGQGT-AFCAGAD---L 83
Query: 139 TRDGY-ADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP 175
           + D + ADY +     +++L   +   P PV+  ++ P
Sbjct: 84  SGDAFAADYPD----RLIELHKAMDASPMPVVGAINGP 117

>pdb|2VSS|F Chain F, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex With Acetyl-Coa And Vanillin Length = 276

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 77  VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
           + +GIA + +NRP+RRNA  P   +E+I        D + GV++LTG G EA+ +G D  
Sbjct: 15  IEDGIAFVILNRPERRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG-EAWTAGMDLK 73
Query: 137 LRTRDGYADYENFG---RLNVLDLQVQIRRL-PKPVIAMVH 173
              R+  A  E      R      Q ++ R+  KP IAMV+
Sbjct: 74  EYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVN 114

>pdb|2VSU|F Chain F, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism Length = 276

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 77  VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
           + +GIA + +NRP+RRNA  P   +E+I        D + GV++LTG G EA+ +G D  
Sbjct: 15  IEDGIAFVILNRPERRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG-EAWTAGMDLK 73
Query: 137 LRTRDGYADYENFG---RLNVLDLQVQIRRL-PKPVIAMVH 173
              R+  A  E      R      Q ++ R+  KP IAMV+
Sbjct: 74  EYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVN 114

>pdb|2J5I|A Chain A, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase Length = 276

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 77  VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
           + +GIA + +NRP++RNA  P   +E+I        D + GV++LTG G EA+ +G D  
Sbjct: 15  IEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG-EAWTAGMDLK 73
Query: 137 LRTRDGYADYENFG---RLNVLDLQVQIRRL-PKPVIAMVH 173
              R+  A  E      R      Q ++ R+  KP IAMV+
Sbjct: 74  EYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVN 114

>pdb|2J5I|I Chain I, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase Length = 276

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 77  VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
           + +GIA + +NRP++RNA  P   +E+I        D + GV++LTG G EA+ +G D  
Sbjct: 15  IEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG-EAWTAGMDLK 73
Query: 137 LRTRDGYADYENFG---RLNVLDLQVQIRRL-PKPVIAMVH 173
              R+  A  E      R      Q ++ R+  KP IAMV+
Sbjct: 74  EYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVN 114

>pdb|2VSU|A Chain A, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism. Length = 276

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 77  VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
           + +GIA + +NRP++RNA  P   +E+I        D + GV++LTG G EA+ +G D  
Sbjct: 15  IEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG-EAWTAGMDLK 73
Query: 137 LRTRDGYADYENFG---RLNVLDLQVQIRRL-PKPVIAMVH 173
              R+  A  E      R      Q ++ R+  KP IAMV+
Sbjct: 74  EYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVN 114

>pdb|2J5I|B Chain B, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase Length = 276

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 77  VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
           + +GIA + +NRP++RNA  P   +E+I        D + GV++LTG G EA+ +G D  
Sbjct: 15  IEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG-EAWTAGMDLK 73
Query: 137 LRTRDGYADYENFG---RLNVLDLQVQIRRL-PKPVIAMVH 173
              R+  A  E      R      Q ++ R+  KP IAMV+
Sbjct: 74  EYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVN 114

>pdb|2VSU|C Chain C, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism Length = 275

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 77  VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
           + +GIA + +NRP++RNA  P   +E+I        D + GV++LTG G EA+ +G D  
Sbjct: 15  IEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG-EAWTAGMDLK 73
Query: 137 LRTRDGYADYENFG---RLNVLDLQVQIRRL-PKPVIAMVH 173
              R+  A  E      R      Q ++ R+  KP IAMV+
Sbjct: 74  EYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVN 114

>pdb|2VSU|E Chain E, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism Length = 276

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 77  VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
           + +GIA + +NRP++RNA  P   +E+I        D + GV++LTG G EA+ +G D  
Sbjct: 15  IEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG-EAWTAGMDLK 73
Query: 137 LRTRDGYADYENFG---RLNVLDLQVQIRRL-PKPVIAMVH 173
              R+  A  E      R      Q ++ R+  KP IAMV+
Sbjct: 74  EYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVN 114

>pdb|2VSS|E Chain E, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex With Acetyl-Coa And Vanillin Length = 276

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 77  VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
           + +GIA + +NRP++RNA  P   +E+I        D + GV++LTG G EA+ +G D  
Sbjct: 15  IEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG-EAWTAGMDLK 73
Query: 137 LRTRDGYADYENFG---RLNVLDLQVQIRRL-PKPVIAMVH 173
              R+  A  E      R      Q ++ R+  KP IAMV+
Sbjct: 74  EYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVN 114

>pdb|1JXZ|A Chain A, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A (Product) Length = 269

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 77  VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-Q 135
           V +G+A+ITI  P  RNA     ++E+  A N A +D SVG +++TG   +AFC+G   +
Sbjct: 9   VEDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITG-AEDAFCAGFYLR 67
Query: 136 ALRTRDGYADYENFGRLNVLDLQVQIR---RLPKPVIAMV 172
            +    G A   +  R+  L  Q  I    R+ +PV+A +
Sbjct: 68  EIPLDKGVAGVRDHFRIAALWWQQMIHKIIRVKRPVLAAI 107

>pdb|4F47|A Chain A, The Structure Of Enoyl-Coa Hydratase Echa19 From Mycobacterium Marinum Length = 278

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 84  ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY 143
           +T+NRP RRNA     ++ ++ A++   +D  +   ILTG G   FC+G D    T+   
Sbjct: 33  VTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGG-YFCAGMDLKAATKKPP 91
Query: 144 ADYENFGRLNV--LDLQVQIRRLPKPVIAMVHLP 175
            D    G  +   +D  ++ RRL KP+IA V  P
Sbjct: 92  GDSFKDGSYDPSRIDALLKGRRLKKPLIAAVEGP 125

>pdb|1UIY|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Thermus Thermophilus Hb8 Length = 253

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 81  IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR 140
           +A + +N P+RRN   P     L++A +D   D  V  ++LTG+G +AF +G D A   R
Sbjct: 9   VAVVFLNDPERRNPLSPEXALSLLQALDDLEADPGVRAVVLTGRG-KAFSAGADLAFLER 67
Query: 141 DGYADYENFGR--LNVLDLQVQIRRLPKPVIAMVHLP 175
                 E   R  L++  L  ++   PKP +A V+ P
Sbjct: 68  VTELGAEENYRHSLSLXRLFHRVYTYPKPTVAAVNGP 104

>pdb|3QRE|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase Echa12_1 From Mycobacterium Marinum Length = 298

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 71  IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFC 130
           ++YE   G G+A IT NR DR NA+ P        A + A  D  + VI+LTG+G   FC
Sbjct: 31  VLYEATPG-GVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRG-RGFC 88
Query: 131 SGGDQALRTRDGYADYENF----GRLNVLDLQVQ-----IRRLPKPVIAMVHLP 175
           +G    L + D  A Y+         N+ DL  +     +  L KPVIA ++ P
Sbjct: 89  AGA--YLGSADAAAGYDKTMAKAKDANLADLVGERPPHFVTMLRKPVIAAINGP 140

>pdb|3I47|A Chain A, Crystal Structure Of Putative Enoyl Coa HydrataseISOMERASE (Crotonase) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 Length = 268

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Query: 68  FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
            +D++YE  + + +  +T+NR  + NAF    + E+    + A +D++V VI+L   G  
Sbjct: 3   LSDLLYE--IQDKVGLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKH 60
Query: 128 AFCSGGDQA-LRTRDGYADYENFGRLNVL-DLQVQIRRLPKPVIAMVH 173
            F +G D   +++   + + EN     VL +L   I + PKP IAMV 
Sbjct: 61  -FSAGADLTWMQSMANFTEEENLEDSLVLGNLMYSISQSPKPTIAMVQ 107

>pdb|3P5M|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Avium Length = 255

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 81  IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR 140
           + +I ++RP++ NA     ++EL     DA  D SV  ++LTG G  AFCSGGD      
Sbjct: 16  VLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAG-RAFCSGGDLTGGDT 74
Query: 141 DGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
            G AD  N        +   I  LPKPVIA VH
Sbjct: 75  AGAADAAN-------RVVRAITSLPKPVIAGVH 100

>pdb|1NZY|A Chain A, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas Sp. Strain Cbs-3 Length = 269

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 77  VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-Q 135
           V +G+A+ITI  P  RNA     ++E+  A N A +D SVG +++TG   +AFC+G   +
Sbjct: 9   VEDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITG-AEDAFCAGFYLR 67
Query: 136 ALRTRDGYADYENFGRLNVLDLQVQIR---RLPKPVIAMV 172
            +    G A   +  R+  L     I    R+ +PV+A +
Sbjct: 68  EIPLDKGVAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAI 107

>pdb|1NZY|B Chain B, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas Sp. Strain Cbs-3 Length = 269

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 77  VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-Q 135
           V +G+A+ITI  P  RNA     ++E+  A N A +D SVG +++TG   +AFC+G   +
Sbjct: 9   VEDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITG-AEDAFCAGFYLR 67
Query: 136 ALRTRDGYADYENFGRLNVLDLQVQIR---RLPKPVIAMV 172
            +    G A   +  R+  L     I    R+ +PV+A +
Sbjct: 68  EIPLDKGVAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAI 107

>pdb|1DUB|A Chain A, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5 Length = 261

Iteration: 1
 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 65  GTEFTDIIYEK-AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG 123
           G  F  II EK      +  I +NRP   NA     ++EL +A     +D +VG I+LTG
Sbjct: 1   GANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTG 60
Query: 124 KGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
            G +AF +G D        + D  +   L+  D    I R+ KPVIA V+
Sbjct: 61  -GEKAFAAGADIKEMQNRTFQDCYSGKFLSHWD---HITRIKKPVIAAVN 106

>pdb|1MJ3|A Chain A, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In Complex With Hexadienoyl-Coa Length = 260

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 68  FTDIIYEK-AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
           F  II EK      +  I +NRP   NA     ++EL +A     +D +VG I+LTG G 
Sbjct: 3   FQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTG-GE 61
Query: 127 EAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           +AF +G D        + D  +   L+  D    I R+ KPVIA V+
Sbjct: 62  KAFAAGADIKEMQNRTFQDCYSGKFLSHWD---HITRIKKPVIAAVN 105

>pdb|1EY3|A Chain A, Structure Of Enoyl-Coa Hydratase Complexed With The Substrate Dac-Coa Length = 258

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 68  FTDIIYEK-AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
           F  II EK      +  I +NRP   NA     ++EL +A     +D +VG I+LTG G 
Sbjct: 1   FQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTG-GE 59
Query: 127 EAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           +AF +G D        + D  +   L+  D    I R+ KPVIA V+
Sbjct: 60  KAFAAGADIKEMQNRTFQDCYSGKFLSHWD---HITRIKKPVIAAVN 103

>pdb|2HW5|A Chain A, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa) Hydratase Short Chain 1, Echs1 Length = 286

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 13/115 (11%)
Query: 64  SGTEFTDIIYEK-AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
           SG  F  II EK      +  I +NRP   NA     + EL +A     +D +VG I+LT
Sbjct: 25  SGANFEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKIFEEDPAVGAIVLT 84
Query: 123 GKGTEAFCSGGD----QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           G G +AF +G D    Q L  +D Y+          L     + ++ KPVIA V+
Sbjct: 85  G-GDKAFAAGADIKEMQNLSFQDCYSS-------KFLKHWDHLTQVKKPVIAAVN 131

>pdb|3RSI|A Chain A, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Atcc 19977 DSM 44196 Length = 265

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 84  ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD--QALRTRD 141
           +T+NRP RRNA   + V +   A+++   D  +   ILTG G+ A+C GGD       RD
Sbjct: 22  LTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGS-AYCVGGDLSDGWMVRD 80
Query: 142 GYA---DYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           G A   D    G+  +L        L KP+IA V+
Sbjct: 81  GSAPPLDPATIGKGLLLS-----HTLTKPLIAAVN 110

>pdb|3T3W|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From Mycobacterium Thermoresistibile Length = 279

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 69  TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEA 128
           T++  +  V + IA IT+NRP+  NA  P  + EL  A+  A +D+ V VI+L   G   
Sbjct: 18  TEMYIDYDVSDRIATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKH- 76
Query: 129 FCSGGDQALRTRDGYAD-------YENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           F +G D  LR      D       Y +  R   L+  ++ R +PKP IA V 
Sbjct: 77  FSAGHD--LRGGGPVPDKLTLEFIYAHESR-RYLEYSLRWRNVPKPSIAAVQ 125

>pdb|3R0O|A Chain A, Crystal Structure Of Carnitinyl-Coa Hydratase From Mycobacterium Avium Length = 273

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 68  FTDIIYEKAVGE---GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGK 124
            T++  + AV E    +A ITI+RPD RNA        +  A  +A+ D  V  +++TG 
Sbjct: 9   LTEVTRQAAVVERRGNVALITIDRPDARNAVNGAVSTAVGDALEEAQRDPEVWAVVITGA 68
Query: 125 GTEAFCSGGD 134
           G ++FC+G D
Sbjct: 69  GDKSFCAGAD 78

>pdb|3OME|A Chain A, Crystal Structure Of A Probable Enoyl-Coa Hydratase From Mycobacterium Smegmatis Length = 282

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 77  VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
           V + IA IT+NRP+  NA  P  + EL  A+  A +D+ V VIIL   G   F +G D  
Sbjct: 29  VADSIATITLNRPEAANAQNPELLDELDAAWTRAAEDNEVKVIILRANGKH-FSAGHD-- 85
Query: 137 LRTRDGYADYENFGRLNV--------LDLQVQIRRLPKPVIAMVH 173
              R G    E      +        LD  ++ R +PKP IA V 
Sbjct: 86  --LRGGGEVPEKISLEFIIQHEARRYLDYTLRWRNVPKPSIAAVQ 128

>pdb|2EJ5|A Chain A, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase Subunit Ii) From Geobacillus Kaustophilus Length = 257

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 68  FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
           +  I YE  V   +A +T+NRPD+ NAF      E+ +A   A  D +V  +++TG G  
Sbjct: 2   YETIRYE--VKGQVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAG-R 58
Query: 128 AFCSGGD 134
           AFC+G D
Sbjct: 59  AFCAGED 65

>pdb|4FZW|C Chain C, Crystal Structure Of The Paaf-paag Hydratase-isomerase Complex From E.coli Length = 274

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 77  VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
           V +G+  +T+NRP+R N+F      +L         D ++  ++LTG G   FC+G D  
Sbjct: 21  VEKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAG-RGFCAGQDLN 79
Query: 137 LRTRDGYADYENFGRLNVLDLQVQIRR---LPKPVIA 170
            R  D      + G          +RR   LPKPVI 
Sbjct: 80  DRNVDPTGPAPDLGMSVERFYNPLVRRLAKLPKPVIC 116

>pdb|3QMJ|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa8_6 From Mycobacterium Marinum Length = 256

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 84  ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA-LRTRDG 142
           +T+NRP+  NAF         +A  DA DD  V V++LTG G   F +G D A ++ R  
Sbjct: 19  LTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSG-RGFSAGTDLAEMQARIT 77
Query: 143 YADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
             ++   G+     L   +   PKP+I  V+
Sbjct: 78  DPNFSE-GKFGFRGLIKALAGFPKPLICAVN 107

>pdb|2F6Q|A Chain A, The Crystal Structure Of Human Peroxisomal Delta3, Delta2 Enoyl Coa Isomerase (Peci) Length = 280

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 79  EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR 138
           +GI KI  NRP ++NA       E+ RA   A  D S+ + +LTG G + + SG D    
Sbjct: 34  DGITKIXFNRPKKKNAINTEXYHEIXRALKAASKDDSI-ITVLTGNG-DYYSSGNDLTNF 91
Query: 139 TRDGYADYENFGRLNVLDLQVQIR---RLPKPVIAMVHLP 175
           T       E   + N + L+  +      PKP+IA+V+ P
Sbjct: 92  TDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGP 131

>pdb|4HDT|A Chain A, Crystal Structure Of A Carnitinyl-Coa Dehydratase From Mycobacterium Thermoresistibile Length = 353

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Query: 80  GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRT 139
           G+  +T+NRP   N+     V  +        +D SV  ++LTG G    C+GGD     
Sbjct: 18  GVGLLTLNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIY 77
Query: 140 RDGYADYENFGR--LNVLDLQVQIRRLPKPVIAMV 172
               AD     R   +   L   I R PKP ++++
Sbjct: 78  HSAKADGAEARRFWFDEYRLNAHIGRYPKPYVSIM 112

>pdb|3R9T|A Chain A, Structure Of Echa1_1 From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 267

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 84  ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-QALRTRDG 142
           ITINRP+ RNA        +  A  +A+ D  V  ++LTG G ++FC+G D +A+  R+ 
Sbjct: 22  ITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARREN 81
Query: 143 --YADYENFG 150
             + D+  +G
Sbjct: 82  LYHPDHPEWG 91

>pdb|3R9S|A Chain A, Structure Of A Carnitinyl-Coa Dehydratase From Mycobacterium Avium 104 Length = 267

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 84  ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-QALRTRDG 142
           ITINRP+ RNA        +  A  +A+ D  V  ++LTG G ++FC+G D +A+  R+ 
Sbjct: 22  ITINRPEARNAVNAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARREN 81
Query: 143 --YADYENFG 150
             + D+  +G
Sbjct: 82  LYHPDHPEWG 91

>pdb|2Q35|A Chain A, Crystal Structure Of The Y82f Variant Of Ech2 Decarboxylase Domain Of Curf From Lyngbya Majuscula Length = 243

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 77  VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
           +G G+ +IT+     RN F P  V+ L   F+    +    V+ILTG G   F SG  + 
Sbjct: 9   LGNGVVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGN-YFSSGASKE 67
Query: 137 LRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
              R      +  G + VLDL   I     P+IA + 
Sbjct: 68  FLIR------KTRGEVEVLDLSGLILDCEIPIIAAMQ 98

>pdb|3OC7|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase From Mycobacterium Avium Length = 267

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 68  FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
             D     A G  +A++T+N P  RNA     V +L +   DA  D +V V++L   G  
Sbjct: 8   LVDYAGPAATGGPVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGT 67
Query: 128 AFCSGGD 134
            FC+G D
Sbjct: 68  -FCAGAD 73

>pdb|3KQF|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa Hydratase From Bacillus Anthracis. Length = 265

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 81  IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR 140
           + KI++NR  + N+     ++EL        ++++  V+ILTG G +AFC+G D  L+ R
Sbjct: 19  VVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGAD--LKER 76
Query: 141 DGYADYENFGRLNVLDLQVQ-IRRLPKPVIAMVH 173
            G  + +    ++ +    + + +LP+PVIA ++
Sbjct: 77  AGXNEEQVRHAVSXIRTTXEXVEQLPQPVIAAIN 110

>pdb|4J2U|A Chain A, Crystal Structure Of An Enoyl-coa Hydratase From Rhodobacter Sphaeroides 2.4.1 Length = 365

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 83  KITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDG 142
           +IT++RP   NA     V+E+  A      D  V ++++  +G  AFC+GGD A     G
Sbjct: 36  RITLSRPAALNALTCAXVQEIDAALRGWIGDPEVELVVIDAEGPRAFCAGGDIAELHGRG 95
Query: 143 YADYENFGRLNVLDLQV----QIRRLPKPVIAMVH 173
            A    FG+ +   ++     +I   PKP++++  
Sbjct: 96  VAGDHAFGQ-DFWRVEYRXNDRIAAFPKPIVSLXQ 129

>pdb|2VRE|A Chain A, Crystal Structure Of Human Peroxisomal Delta3,5, Delta2,4-Dienoyl Coa Isomerase Length = 296

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 81  IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSG-------- 132
           +  + +NRP++RNA      +E++  FN    D+    ++++G G + F +G        
Sbjct: 41  VLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAG-KMFTAGIDLMDMAS 99
Query: 133 ------GDQALRT----RDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
                 GD   R     RD    Y+     NV      I R PKPVIA VH
Sbjct: 100 DILQPKGDDVARISWYLRDIITRYQE--TFNV------IERCPKPVIAAVH 142

>pdb|3SWX|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 265

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 84  ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRD-- 141
           I +NRP +RNAF    ++EL  A  +   D+ +   +L G+G   F +G D A    +  
Sbjct: 22  IGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEG-PLFTAGLDLASVAAEIQ 80
Query: 142 GYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           G A     G +N    QV  R+L KP++  VH
Sbjct: 81  GGASLTPEGGIN--PWQVDGRQLSKPLLVAVH 110

>pdb|3QXZ|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 265

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 65  GTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGK 124
           G+  T++  E  + +G+A +T++ P  RN+F     ++L  A+    DD +V VI+LTG 
Sbjct: 3   GSMVTELHEE--IRDGVAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGA 60
Query: 125 GTEAFCSGGD 134
              AFCSG  
Sbjct: 61  -PPAFCSGAQ 69

>pdb|3BPT|A Chain A, Crystal Structure Of Human Beta-Hydroxyisobutyryl-Coa Hydrolase In Complex With Quercetin Length = 363

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 84  ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD 134
           IT+NRP   NA   + ++++         D    +II+ G G +AFC+GGD
Sbjct: 19  ITLNRPKFLNALTLNXIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGD 69

>pdb|2Q2X|A Chain A, Crystal Structure Of The Ech2 Decarboxylase Domain Of Curf From Lyngbya Majuscula Length = 243

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Query: 77  VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
           +G G+ +IT      RN F P  V+ L   F+    +    V+ILTG G   F SG  + 
Sbjct: 9   LGNGVVQITXKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGN-YFSSGASKE 67
Query: 137 LRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIA 170
              R      +  G + VLDL   I     P+IA
Sbjct: 68  YLIR------KTRGEVEVLDLSGLILDCEIPIIA 95

>pdb|3QKA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From Mycobacterium Marinum Length = 261

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 65  GTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGK 124
           G+  +D++  +  G  +  + INRP  RNA    T   L  AF +   D S  V +L G 
Sbjct: 3   GSMVSDLVQVERNGP-VTTVIINRPQARNAVNGPTAAALYSAFAEFDRDESASVAVLCGN 61
Query: 125 GTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           G   FC+G D  L+   G A+     R     +      L KPVIA V
Sbjct: 62  GGT-FCAGAD--LKAF-GTAEANAVHRTGPGPMGPSRMMLSKPVIAAV 105

>pdb|3NJB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Smegmatis, Iodide Soak Length = 333

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 71  IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFC 130
           + YE  V + +A+IT NRP++ NA    T  EL      A  D  V VI+++G+G E FC
Sbjct: 37  MTYE--VTDRVARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRG-EGFC 93
Query: 131 SGGD 134
           +G D
Sbjct: 94  AGFD 97

>pdb|3SLL|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 290

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 81  IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQ 135
           IA +T+NRP+R NA     +    +   D   D+ V  +++TG G + FCSG DQ
Sbjct: 34  IALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAG-KGFCSGADQ 87

>pdb|1DCI|A Chain A, Dienoyl-Coa Isomerase Length = 275

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 27/108 (25%)
Query: 84  ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSG----------- 132
           + +NRP++RNA      +EL+  F     DS    ++++G G + F SG           
Sbjct: 17  VQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAG-KMFTSGIDLMDMASDIL 75
Query: 133 ---GDQALRT----RDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
              GD   R     RD  + Y+    +        I + PKPVIA +H
Sbjct: 76  QPPGDDVARIAWYLRDLISRYQKTFTV--------IEKCPKPVIAAIH 115

>pdb|3H81|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Tuberculosis Length = 278

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 84  ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD 134
           IT+NRP   NA     + E+  A  +  DD  +G II+TG   +AF +G D
Sbjct: 38  ITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSA-KAFAAGAD 87

>pdb|3Q0J|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Crotonase In Complex With The Inhibitor Acetoacetylcoa Length = 258

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 84  ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD 134
           IT+NRP   NA     + E+  A  +  DD  +G II+TG   +AF +G D
Sbjct: 18  ITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSA-KAFAAGAD 67

>pdb|3PZK|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Crotonase In Apo Form Length = 257

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 84  ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD 134
           IT+NRP   NA     + E+  A  +  DD  +G II+TG   +AF +G D
Sbjct: 17  ITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSA-KAFAAGAD 66

>pdb|3QYR|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2 Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
Query: 68  FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
            TD I      E +  +T+NRP  RNA           A  DA  D  V V+I+TG    
Sbjct: 5   MTDEILLSNTEERVRTLTLNRPQARNALSAALRDRFFGALADAETDDDVDVVIITG-ADP 63
Query: 128 AFCSGGDQALRTRDGYADYENFGRLNVL-DLQVQIRRLPKPVIAMVH 173
            FC+G            D +  G  + L D+  +   L KPVI  ++
Sbjct: 64  VFCAG-----------LDLKELGGSSALPDISPRWPALTKPVIGAIN 99

>pdb|3P85|A Chain A, Crystal Structure Enoyl-Coa Hydratase From Mycobacterium Avium Length = 270

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
Query: 68  FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
            TD I      E +  +T+NRP  RNA           A  DA  D  V V+I+TG    
Sbjct: 22  MTDEILLSNTEERVRTLTLNRPQARNALSAALRDRFFGALADAETDDDVDVVIITG-ADP 80
Query: 128 AFCSGGDQALRTRDGYADYENFGRLNVL-DLQVQIRRLPKPVIAMVH 173
            FC+G            D +  G  + L D+  +   L KPVI  ++
Sbjct: 81  VFCAG-----------LDLKELGGSSALPDISPRWPALTKPVIGAIN 116

>pdb|3HRX|A Chain A, Crystal Structure Of Phenylacetic Acid Degradation Protein Paag Length = 254

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 79  EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD 134
           +G+  +T+NRP++ NA     +  L  A  +  +D  V  ++LTG G  AF +G D
Sbjct: 8   DGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAG-RAFSAGQD 62

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	175
2uzf_A	273	Naphthoate synthase; lyase, menaquinone biosynthes	8e-54
3t89_A	289	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	3e-52
4eml_A	275	Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coe	4e-52
3t8b_A	334	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	6e-52
3t3w_A	279	Probable enoyl-COA hydratase; ssgcid, structural g	6e-43
2j5i_A	276	P-hydroxycinnamoyl COA hydratase/lyase; vanillin,	5e-36
1szo_A	257	6-oxocamphor hydrolase; enzyme-product complex; HE	3e-28
3lke_A	263	Enoyl-COA hydratase; nysgrc, target 11251J, struct	3e-28
3qmj_A	256	Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid,	6e-28
3i47_A	268	Enoyl COA hydratase/isomerase (crotonase); structu	8e-28
2ej5_A	257	Enoyl-COA hydratase subunit II; structural genomic	1e-27
2j5g_A	263	ALR4455 protein; enzyme evolution, C-C bond hydrol	2e-27
3njd_A	333	Enoyl-COA hydratase; ssgcid, mycobacerium smegmati	4e-27
2a7k_A	250	CARB; crotonase, antibiotic, beta-lactam, biosynth	4e-27
3kqf_A	265	Enoyl-COA hydratase/isomerase family protein; IDP0	5e-27
3g64_A	279	Putative enoyl-COA hydratase; alpha-beta structure	5e-27
3myb_A	286	Enoyl-COA hydratase; ssgcid, struct genomics, seat	6e-27
3hp0_A	267	Putative polyketide biosynthesis enoyl-COA hydrata	8e-27
3sll_A	290	Probable enoyl-COA hydratase/isomerase; structural	1e-26
3gow_A	254	PAAG, probable enoyl-COA hydratase; the spiral fol	1e-26
3p5m_A	255	Enoyl-COA hydratase/isomerase; seattle structural	1e-26
1nzy_A	269	Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogen	1e-26
3fdu_A	266	Putative enoyl-COA hydratase/isomerase; structural	5e-26
3rrv_A	276	Enoyl-COA hydratase/isomerase; structural genomics	6e-26
3swx_A	265	Probable enoyl-COA hydratase/isomerase; structural	7e-26
3qk8_A	272	Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SB	9e-26
3qxz_A	265	Enoyl-COA hydratase/isomerase; structural genomics	9e-26
2q35_A	243	CURF; crotonase, lyase; 1.65A {Lyngbya majuscula}	1e-25
3r9t_A	267	ECHA1_1; ssgcid, seattle structural genomics cente	1e-25
1uiy_A	253	Enoyl-COA hydratase; lyase, beta-oxidation, croton	2e-25
3oc7_A	267	Enoyl-COA hydratase; seattle structural genomics c	3e-25
3qre_A	298	Enoyl-COA hydratase, ECHA12_1; structural genomics	3e-25
3isa_A	254	Putative enoyl-COA hydratase/isomerase; structural	3e-25
2f6q_A	280	Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxis	4e-25
2vx2_A	287	Enoyl-COA hydratase domain-containing protein 3; i	6e-25
1hzd_A	272	AUH, AU-binding protein/enoyl-COA hydratase; RNA-b	7e-25
2pbp_A	258	Enoyl-COA hydratase subunit I; B-oxidation, struct	9e-25
3rsi_A	265	Putative enoyl-COA hydratase/isomerase; structural	2e-24
3he2_A	264	Enoyl-COA hydratase ECHA6; fatty acid metabolism,	3e-24
3tlf_A	274	Enoyl-COA hydratase/isomerase; structural genomics	3e-24
1wz8_A	264	Enoyl-COA hydratase; lyase, crotonase, hexamer, st	5e-24
1pjh_A	280	Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral	6e-24
3lao_A	258	Enoyl-COA hydratase/isomerase; alpha-beta sandwich	7e-24
3gkb_A	287	Putative enoyl-COA hydratase; structural genomics,	1e-23
4f47_A	278	Enoyl-COA hydratase ECHA19; ssgcid, seattle struct	1e-23
3pe8_A	256	Enoyl-COA hydratase; emerald biostructures, struct	1e-23
3moy_A	263	Probable enoyl-COA hydratase; ssgcid, seattle stru	2e-23
2ppy_A	265	Enoyl-COA hydratase; beta-oxidation, fatty acid me	2e-23
3qxi_A	265	Enoyl-COA hydratase ECHA1; structural genomics, se	3e-23
3l3s_A	263	Enoyl-COA hydratase/isomerase family protein; crot	3e-23
3hin_A	275	Putative 3-hydroxybutyryl-COA dehydratase; structu	5e-23
2gtr_A	261	CDY-like, chromodomain Y-like protein; structural	8e-23
1mj3_A	260	Enoyl-COA hydratase, mitochondrial; homohexamer, l	2e-22
2fbm_A	291	Y chromosome chromodomain protein 1, telomeric IS;	3e-22
3h0u_A	289	Putative enoyl-COA hydratase; structural genomics,	4e-22
3h81_A	278	Enoyl-COA hydratase ECHA8; niaid, decode, infectio	5e-22
1dci_A	275	Dienoyl-COA isomerase; lyase; 1.50A {Rattus norveg	5e-22
1ef8_A	261	Methylmalonyl COA decarboxylase; lyase; 1.85A {Esc	1e-21
1sg4_A	260	3,2-trans-enoyl-COA isomerase, mitochondrial; crot	2e-21
3r9q_A	262	Enoyl-COA hydratase/isomerase; ssgcid, lyase,isome	3e-21
3pea_A	261	Enoyl-COA hydratase/isomerase family protein; stru	4e-21
3trr_A	256	Probable enoyl-COA hydratase/isomerase; ssgcid, st	2e-20
4di1_A	277	Enoyl-COA hydratase ECHA17; structural genomics, s	7e-20
2np9_A	440	DPGC; protein inhibitor complex, oxidoreductase; H	3e-19
3r6h_A	233	Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium m	3e-18
2w3p_A	556	Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri	1e-16
3ot6_A	232	Enoyl-COA hydratase/isomerase family protein; stru	5e-16
3m6n_A	305	RPFF protein; enoyl-COA hydratase, lyase; 1.80A {X	6e-15
3bpt_A	363	3-hydroxyisobutyryl-COA hydrolase; coenzyme A, bet	3e-14
3ju1_A	407	Enoyl-COA hydratase/isomerase family protein; alph	1e-13
2wtb_A	725	MFP2, fatty acid multifunctional protein (ATMFP2);	6e-11
1wdk_A	715	Fatty oxidation complex alpha subunit; alpha2BETA2	2e-10
3zwc_A	742	Peroxisomal bifunctional enzyme; beta oxidation pa	1e-08

>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus} Length = 273

 Score =  170 bits (434), Expect = 8e-54
 Identities = 66/110 (60%), Positives = 78/110 (70%), Gaps = 2/110 (1%)

Query: 63  ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
           E+  E+ +I YE    EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LT
Sbjct: 7   ETLREYDEIKYEFY--EGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLT 64

Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           G+G  AFCSGGDQ  R   GY   +   RLNVLDLQ  IR +PKPVIAMV
Sbjct: 65  GEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMV 114

>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 3h02_A 2iex_A Length = 289

 Score =  167 bits (425), Expect = 3e-52
 Identities = 67/112 (59%), Positives = 77/112 (68%), Gaps = 2/112 (1%)

Query: 62  DESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIIL 121
            +    F DI YEK+  +GIAKITINRP  RNAFRP TVKE+I+A  DAR D ++GVIIL
Sbjct: 20  HDCSEGFEDIRYEKS-TDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIIL 78

Query: 122 TGKGTEAFCSGGDQALRTRDGYA-DYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           TG G +AFCSGGDQ +R   G   D      LNVLD Q QIR  PKPV+AMV
Sbjct: 79  TGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMV 130

>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP} Length = 275

 Score =  166 bits (423), Expect = 4e-52
 Identities = 63/115 (54%), Positives = 77/115 (66%), Gaps = 7/115 (6%)

Query: 63  ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
                + DI+Y KA   GIAKI INRP +RNAFRP TV EL  AF +AR+D+ +GV++LT
Sbjct: 4   HIAKHYDDILYYKA--GGIAKIVINRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLT 61

Query: 123 GKGTE-----AFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           G G       AFCSGGDQ++R   GY D +   RLNVLDLQ  IR +PK VIA+V
Sbjct: 62  GAGPHSDGKYAFCSGGDQSVRGEGGYIDDQGTPRLNVLDLQRLIRSMPKVVIALV 116

>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A Length = 334

 Score =  168 bits (426), Expect = 6e-52
 Identities = 60/173 (34%), Positives = 85/173 (49%), Gaps = 22/173 (12%)

Query: 17  NHLVPVISSDSNSGFIGLNNASMNDSYHRIHGEVPSHDVVWRIACDESGTEFTDIIYEKA 76
           +H   ++   S+     +  A           + P     WR+   +   + TDI Y + 
Sbjct: 9   HHSSGLVPRGSHM----VAPAGEQGRSSTALSDNPFDAKAWRLV--DGFDDLTDITYHRH 62

Query: 77  VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG------TEAFC 130
           V +   ++  NRP+ RNAFRPHTV EL R  + AR    VGV++LTG G        AFC
Sbjct: 63  VDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFC 122

Query: 131 SGGDQALRTRDGY----------ADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           SGGDQ +R R GY           D    GRL++L++Q  IR +PK VI +V+
Sbjct: 123 SGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVN 175

>3t3w_A Probable enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A Length = 279

 Score =  143 bits (362), Expect = 6e-43
 Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 7/121 (5%)

Query: 57  WRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSV 116
           WR            I Y+ +  + IA IT+NRP+  NA  P  + EL  A+  A +D+ V
Sbjct: 8   WRRPSRPEQRTEMYIDYDVS--DRIATITLNRPEAANAQNPELLDELDAAWTRAAEDNDV 65

Query: 117 GVIILTGKGTEAFCSGGD----QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
            VI+L   G + F +G D      +  +              L+  ++ R +PKP IA V
Sbjct: 66  SVIVLRANG-KHFSAGHDLRGGGPVPDKLTLEFIYAHESRRYLEYSLRWRNVPKPSIAAV 124

Query: 173 H 173
            
Sbjct: 125 Q 125

>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C* Length = 276

 Score =  125 bits (316), Expect = 5e-36
 Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 7/111 (6%)

Query: 67  EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
            +  +  E    +GIA + +NRP++RNA  P   +E+I        D + GV++LTG G 
Sbjct: 7   RWKTVKVEIE--DGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG- 63

Query: 127 EAFCSGGDQA----LRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           EA+ +G D                E   R         +R   KP IAMV+
Sbjct: 64  EAWTAGMDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVN 114

>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A Length = 257

 Score =  104 bits (262), Expect = 3e-28
 Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 4/112 (3%)

Query: 62  DESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIIL 121
            E   ++ +I  E+    G+  +T++   +   +      EL   F+D   D    V+IL
Sbjct: 9   QEYSQKYENIRLERD--GGVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVIL 66

Query: 122 TGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           TG G  +FC+  D          D++         L   +  +  PVIA V+
Sbjct: 67  TGTG-PSFCNEIDFTSFNLGTPHDWDEIIFE-GQRLLNNLLSIEVPVIAAVN 116

>3lke_A Enoyl-COA hydratase; nysgrc, target 11251J, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans} Length = 263

 Score =  104 bits (262), Expect = 3e-28
 Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 5/110 (4%)

Query: 67  EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
             + +  E         IT++ P+++N         L+ A     +++S+  IIL  K  
Sbjct: 2   SLSYVHTEIQ--NDALYITLDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHR 59

Query: 127 EAFCSGGDQALRTRDGYADYENFGRLNVLDLQ---VQIRRLPKPVIAMVH 173
             F SG              +   R  +  L    ++I   PK  +A+++
Sbjct: 60  AYFSSGPRLEDLLICASDQSDVRLREVLHVLNHCVLEIFTSPKVTVALIN 109

>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum} Length = 256

 Score =  103 bits (260), Expect = 6e-28
 Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 3/107 (2%)

Query: 67  EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
               +  +      +  +T+NRP+  NAF         +A  DA DD  V V++LTG G 
Sbjct: 4   SMVTLQIDDD--NRVRTLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSG- 60

Query: 127 EAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
             F +G D A           + G+     L   +   PKP+I  V+
Sbjct: 61  RGFSAGTDLAEMQARITDPNFSEGKFGFRGLIKALAGFPKPLICAVN 107

>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} Length = 268

 Score =  103 bits (260), Expect = 8e-28
 Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 5/109 (4%)

Query: 67  EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
             +D++YE    + +  +T+NR  + NAF    + E+    + A +D++V VI+L   G 
Sbjct: 2   SLSDLLYEIQ--DKVGLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANG- 58

Query: 127 EAFCSGGD-QALRTRDGYADYENFGRLNVL-DLQVQIRRLPKPVIAMVH 173
           + F +G D   +++   + + EN     VL +L   I + PKP IAMV 
Sbjct: 59  KHFSAGADLTWMQSMANFTEEENLEDSLVLGNLMYSISQSPKPTIAMVQ 107

>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus} Length = 257

 Score =  102 bits (257), Expect = 1e-27
 Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 5/106 (4%)

Query: 68  FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
           +  I YE      +A +T+NRPD+ NAF      E+ +A   A  D +V  +++TG G  
Sbjct: 2   YETIRYEVK--GQVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAG-R 58

Query: 128 AFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           AFC+G D  L       D+ +  R     +   +  L KPV+A V+
Sbjct: 59  AFCAGED--LSGVTEEMDHGDVLRSRYAPMMKALHHLEKPVVAAVN 102

>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D Length = 263

 Score =  102 bits (256), Expect = 2e-27
 Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 4/113 (3%)

Query: 62  DESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIIL 121
            E  T++ ++ + +    GI ++ ++       F   T +E   AF D   D    V+IL
Sbjct: 16  PEYFTKYENLHFHRDEN-GILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVIL 74

Query: 122 TGKGTEAFCSGGD-QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           TG G +A+ +  D  +L       +++         +   +  +  PVI+ V+
Sbjct: 75  TGSG-DAWMAEIDFPSLGDVTNPREWDKTYWEG-KKVLQNLLDIEVPVISAVN 125

>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A Length = 333

 Score =  103 bits (258), Expect = 4e-27
 Identities = 28/139 (20%), Positives = 45/139 (32%), Gaps = 32/139 (23%)

Query: 64  SGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG 123
                  + YE    + +A+IT NRP++ NA    T  EL      A  D  V VI+++G
Sbjct: 30  DFDNLKTMTYEVT--DRVARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSG 87

Query: 124 KGTEAFCSGGDQALRTRDGYADYENFGRLN-----------------------------V 154
           +G E FC+G D +       +                                       
Sbjct: 88  RG-EGFCAGFDLSAYAEGSSSAGGGSPYEGTVLSGKTQALNHLPDEPWDPMVDYQMMSRF 146

Query: 155 LDLQVQIRRLPKPVIAMVH 173
           +     +    KP +  +H
Sbjct: 147 VRGFASLMHCDKPTVVKIH 165

>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A* Length = 250

 Score =  101 bits (254), Expect = 4e-27
 Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%)

Query: 71  IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFC 130
           +  E +  + +  IT++ P++ N F       +  A   A  D SV  +++ G    +F 
Sbjct: 2   VFEENS--DEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFS 59

Query: 131 SGGD-QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           +GGD   ++      D E +    V+DL   +  + KP IA V 
Sbjct: 60  AGGDFNEVKQLSRSEDIEEWID-RVIDLYQAVLNVNKPTIAAVD 102

>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis} Length = 265

 Score =  101 bits (255), Expect = 5e-27
 Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 2/108 (1%)

Query: 66  TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
            +  +I  + A    + KI++NR  + N+     ++EL        ++++  V+ILTG G
Sbjct: 5   LQLQNISVDYA-TPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAG 63

Query: 126 TEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
            +AFC+G D   R         +     +      + +LP+PVIA ++
Sbjct: 64  EKAFCAGADLKERAGMNEEQVRHAVS-MIRTTMEMVEQLPQPVIAAIN 110

>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3} Length = 279

 Score =  101 bits (255), Expect = 5e-27
 Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 10/112 (8%)

Query: 67  EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
           E+  +  E    +G+A +T+ RPD+ NA       +L     +     +V  ++L G+G 
Sbjct: 15  EWRHLRVEIT--DGVATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEG- 71

Query: 127 EAFCSGGDQALRTRDGYADYENFGRLNVL-----DLQVQIRRLPKPVIAMVH 173
             FCSGGD  +    G     +  RL         +   +R  P PVIA +H
Sbjct: 72  RGFCSGGD--VDEIIGATLSMDTARLLDFNRMTGQVVRAVRECPFPVIAALH 121

>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis} Length = 286

 Score =  101 bits (255), Expect = 6e-27
 Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 3/112 (2%)

Query: 63  ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
             G+    ++ +     G+  +T+NRP   NA     +  L  AF    +D SV  ++L 
Sbjct: 18  GPGSMSEPLLLQDRDERGVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLA 77

Query: 123 GKGTEAFCSGGD-QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
             G +AFC+G D + +R       YE        D+ + I+RLP PVIA VH
Sbjct: 78  ASG-KAFCAGHDLKEMRAEPSREYYEKLFAR-CTDVMLAIQRLPAPVIARVH 127

>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis} Length = 267

 Score =  101 bits (253), Expect = 8e-27
 Identities = 24/111 (21%), Positives = 44/111 (39%), Gaps = 5/111 (4%)

Query: 64  SGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG 123
           S   +  I         +  IT +RP+  N      ++E ++  N      +V V++L G
Sbjct: 2   SLVTYQTIKVRFQ--ASVCYITFHRPEANNTINDTLIEECLQVLNQCETS-TVTVVVLEG 58

Query: 124 KGTEAFCSGGD-QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
              E FC G D Q +         +   +  + DL ++++  P   I+ V 
Sbjct: 59  LP-EVFCFGADFQEIYQEMKRGRKQASSQEPLYDLWMKLQTGPYVTISHVR 108

>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus} Length = 290

 Score =  101 bits (254), Expect = 1e-26
 Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 8/117 (6%)

Query: 63  ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
           +     + ++ ++     IA +T+NRP+R NA     +    +   D   D+ V  +++T
Sbjct: 17  QGPGSMSFVLVDR-PRPEIALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVIT 75

Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQV------QIRRLPKPVIAMVH 173
           G G   FCSG DQ       +        + +  +++       +RR+ +PVIA ++
Sbjct: 76  GAGK-GFCSGADQKSAGPIPHIGGLTQPTIALRSMELLDEVILTLRRMHQPVIAAIN 131

>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium} Length = 255

 Score =  100 bits (251), Expect = 1e-26
 Identities = 39/106 (36%), Positives = 50/106 (47%), Gaps = 10/106 (9%)

Query: 68  FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
              I  E      + +I ++RP++ NA     ++EL     DA  D SV  ++LTG G  
Sbjct: 5   MNGISVEHD--GAVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAG-R 61

Query: 128 AFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           AFCSGGD       G AD  N        +   I  LPKPVIA VH
Sbjct: 62  AFCSGGDLTGGDTAGAADAAN-------RVVRAITSLPKPVIAGVH 100

>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B* Length = 269

 Score =  100 bits (252), Expect = 1e-26
 Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 7/110 (6%)

Query: 68  FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
           +  I +     +G+A+ITI  P  RNA     ++E+  A N A +D SVG +++TG   +
Sbjct: 2   YEAIGHRVE--DGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAE-D 58

Query: 128 AFCSGGD----QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           AFC+G         +   G  D+     L    +  +I R+ +PV+A ++
Sbjct: 59  AFCAGFYLREIPLDKGVAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAIN 108

>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii} Length = 266

 Score = 98.8 bits (247), Expect = 5e-26
 Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 4/109 (3%)

Query: 66  TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
           +    +        G+  + INRP+ +NA        + +A ++A  +  V V++L G  
Sbjct: 2   SLHPHLNANLE--GGVLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAE 59

Query: 126 TEAFCSGGD-QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
              F +G D +         +    G++    L     RL KP+I  V 
Sbjct: 60  -HDFTAGNDMKDFMGFVQNPNAGPAGQVPPFVLLKSAARLSKPLIIAVK 107

>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp} Length = 276

 Score = 98.8 bits (247), Expect = 6e-26
 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)

Query: 68  FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
            T+I         +  IT+NRPD  N+        L R +    DD +    ++TG G  
Sbjct: 27  PTEIDVRAD--GALRIITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAGR- 83

Query: 128 AFCSGGD-QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           AF +GGD   L+     AD       +  ++ + + R   PV+A V+
Sbjct: 84  AFSAGGDFGYLKELSADADLRAKTIRDGREIVLGMARCRIPVVAAVN 130

>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus} Length = 265

 Score = 98.7 bits (247), Expect = 7e-26
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 62  DESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIIL 121
             S +++  +   +     +  I +NRP +RNAF    ++EL  A  +   D+ +   +L
Sbjct: 2   PGSMSDYETLRIRRD--GYVLVIGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVL 59

Query: 122 TGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
            G+G   F +G D A    +            +   QV  R+L KP++  VH
Sbjct: 60  YGEG-PLFTAGLDLASVAAEIQGGASLTPEGGINPWQVDGRQLSKPLLVAVH 110

>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} PDB: 3q1t_A Length = 272

 Score = 98.4 bits (246), Expect = 9e-26
 Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 4/109 (3%)

Query: 66  TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
            +F  + +E     G+  + ++ P   N+  P   ++L   +     D  V V+++ G+G
Sbjct: 10  QDFPSLRFEPGEH-GVLNLVLDSPGL-NSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEG 67

Query: 126 TEAFCSGGD-QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
             AF SGG  + +    G  +          DL + +  L KPV++ + 
Sbjct: 68  K-AFSSGGSFELIDETIGDYEGRIRIMREARDLVLNLVNLDKPVVSAIR 115

>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} Length = 265

 Score = 98.4 bits (246), Expect = 9e-26
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 5/108 (4%)

Query: 65  GTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGK 124
           G+  T++  E    +G+A +T++ P  RN+F     ++L  A+    DD +V VI+LTG 
Sbjct: 3   GSMVTELHEEIR--DGVAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGA 60

Query: 125 GTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
              AFCSG    +               +   +Q     L  PVIA V
Sbjct: 61  P-PAFCSGAQ--ISAAAETFAAPRNPDFSASPVQPAAFELRTPVIAAV 105

>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A Length = 243

 Score = 97.2 bits (243), Expect = 1e-25
 Identities = 28/103 (27%), Positives = 40/103 (38%), Gaps = 9/103 (8%)

Query: 71  IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFC 130
            + E     G+ +IT+     RN F P  V+ L   F+    +    V+ILTG G   F 
Sbjct: 5   QLTELG--NGVVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYG-NYFS 61

Query: 131 SGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           SG  +    R    + E        DL   I     P+IA + 
Sbjct: 62  SGASKEFLIRKTRGEVEVL------DLSGLILDCEIPIIAAMQ 98

>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} PDB: 3r9s_A 3r0o_A Length = 267

 Score = 97.6 bits (244), Expect = 1e-25
 Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 4/110 (3%)

Query: 63  ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
            S T+    + E+     +  ITINRP+ RNA        +  A  +A+ D  V  ++LT
Sbjct: 3   GSMTDAPGALAERR--GNVMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLT 60

Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           G G ++FC+G D     R     + +               + KP IA V
Sbjct: 61  GAGDKSFCAGADLKAIARRENLYHPDHPEWGFAGY--VRHFIDKPTIAAV 108

>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3 Length = 253

 Score = 97.2 bits (243), Expect = 2e-25
 Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 5/105 (4%)

Query: 71  IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFC 130
           ++  +     +A + +N P+RRN   P     L++A +D   D  V  ++LTG+G +AF 
Sbjct: 1   MVQVEK--GHVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRG-KAFS 57

Query: 131 SGGD-QALRTRDGYADYENFG-RLNVLDLQVQIRRLPKPVIAMVH 173
           +G D   L         EN+   L+++ L  ++   PKP +A V+
Sbjct: 58  AGADLAFLERVTELGAEENYRHSLSLMRLFHRVYTYPKPTVAAVN 102

>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} Length = 267

 Score = 97.3 bits (243), Expect = 3e-25
 Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 5/115 (4%)

Query: 63  ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
            S     D     A G  +A++T+N P  RNA     V +L +   DA  D +V V++L 
Sbjct: 3   GSMDALVDYAGPAATGGPVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLA 62

Query: 123 GKGTEAFCSGGD-QALRTRDGYADYENFGRLNVLDLQV---QIRRLPKPVIAMVH 173
             G   FC+G D     +    +   +       ++      I     PVIA + 
Sbjct: 63  HTG-GTFCAGADLSEAGSGGSPSSAYDMAVERAREMAALMRAIVESRLPVIAAID 116

>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M} Length = 298

 Score = 97.7 bits (244), Expect = 3e-25
 Identities = 38/141 (26%), Positives = 53/141 (37%), Gaps = 11/141 (7%)

Query: 39  MNDSYHRIHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPH 98
           M   +H   G + +           +      ++YE   G G+A IT NR DR NA+ P 
Sbjct: 1   MAHHHHHHMGTLEAQTQG--PGSMSAADAQDAVLYEATPG-GVAIITFNRADRLNAWGPD 57

Query: 99  TVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-------QALRTRDGYADYENFGR 151
                  A + A  D  + VI+LTG+G   FC+G                  A   N   
Sbjct: 58  LAAGFYAAIDRAEADPGIRVIVLTGRGR-GFCAGAYLGSADAAAGYDKTMAKAKDANLAD 116

Query: 152 LNVLDLQVQIRRLPKPVIAMV 172
           L        +  L KPVIA +
Sbjct: 117 LVGERPPHFVTMLRKPVIAAI 137

>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis} Length = 254

 Score = 96.5 bits (241), Expect = 3e-25
 Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 7/109 (6%)

Query: 66  TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
           +    +  E+         T++RP++RNA     V+ LI   + A  +  V +++  G G
Sbjct: 4   SASLPLAIERR--PAAWTFTLSRPEKRNALSAELVEALIDGVDAAHRE-QVPLLVFAGAG 60

Query: 126 TEAFCSGGD-QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
              F +G D     T+          R+    L  ++   P   +A+ H
Sbjct: 61  -RNFSAGFDFTDYETQSEGDLLLRMVRIE--MLLQRVAGSPSLTLALAH 106

>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3 Length = 280

 Score = 96.9 bits (242), Expect = 4e-25
 Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 7/115 (6%)

Query: 62  DESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIIL 121
                 F  ++      +GI KI  NRP ++NA       E++RA   A  D S+ + +L
Sbjct: 19  YFQSMGFETLVVTSE--DGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVL 75

Query: 122 TGKGTEAFCSGGD---QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           TG G + + SG D          G  +      + + +        PKP+IA+V+
Sbjct: 76  TGNG-DYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVN 129

>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens} Length = 287

 Score = 96.6 bits (241), Expect = 6e-25
 Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 13/138 (9%)

Query: 44  HRIHGEVPSHDVVWR------IACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRP 97
           H  H      D+         +      +E       +   +GI  I ++ P +RN    
Sbjct: 2   HHHHHHSSGVDLGTENLYFQSMGAGRRESEPRPTSARQL--DGIRNIVLSNPKKRNTLSL 59

Query: 98  HTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADY--ENFGRLNVL 155
             +K L        D + + VII++ +G   F SG D    T +   DY  E F   +  
Sbjct: 60  AMLKSLQSDILHDADSNDLKVIIISAEG-PVFSSGHDLKELTEEQGRDYHAEVFQTCS-- 116

Query: 156 DLQVQIRRLPKPVIAMVH 173
            + + IR  P PVIAMV+
Sbjct: 117 KVMMHIRNHPVPVIAMVN 134

>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A Length = 272

 Score = 96.1 bits (240), Expect = 7e-25
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 1/95 (1%)

Query: 79  EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR 138
            GI  + INR   +N+   + +K L +A +  + D  V  II+  +    FC+G D   R
Sbjct: 20  RGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKER 79

Query: 139 TRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
            +   ++   F    +  +   I  LP P IA + 
Sbjct: 80  AKMSSSEVGPFVS-KIRAVINDIANLPVPTIAAID 113

>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A Length = 258

 Score = 95.3 bits (238), Expect = 9e-25
 Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 6/108 (5%)

Query: 66  TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
           +EF  I   +     +  I + RPD  NA     V E++ A      +  V VI+LTG+G
Sbjct: 2   SEFVSIAARQE--GAVGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRG 59

Query: 126 TEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
             AF +G D     +D     E   +    D   ++  +  P+IA V+
Sbjct: 60  -RAFAAGADIQEMAKDDPIRLEWLNQFADWD---RLSIVKTPMIAAVN 103

>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus} Length = 265

 Score = 94.5 bits (236), Expect = 2e-24
 Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 3/109 (2%)

Query: 64  SGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG 123
           S +   +++ E+     +  +T+NRP RRNA   + V +   A+++   D  +   ILTG
Sbjct: 4   SMSAARELLVERD--GPVVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTG 61

Query: 124 KGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
            G  A+C GGD +                 +    +    L KP+IA V
Sbjct: 62  AG-SAYCVGGDLSDGWMVRDGSAPPLDPATIGKGLLLSHTLTKPLIAAV 109

>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis} Length = 264

 Score = 94.2 bits (235), Expect = 3e-24
 Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 10/112 (8%)

Query: 62  DESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIIL 121
            ++    + I   +A  E +  I + RP+RRNA     V+EL +A   A D  S   I+L
Sbjct: 14  AQTQGPGSMIGITQA--EAVLTIELQRPERRNALNSQLVEELTQAIRKAGDG-SARAIVL 70

Query: 122 TGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           TG+GT AFC+G D  L      ADY +       +L   +   P PV+  ++
Sbjct: 71  TGQGT-AFCAGAD--LSGDAFAADYPDRLI----ELHKAMDASPMPVVGAIN 115

>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} Length = 274

 Score = 94.6 bits (236), Expect = 3e-24
 Identities = 39/116 (33%), Positives = 53/116 (45%), Gaps = 9/116 (7%)

Query: 64  SGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG 123
               F  I YE       A IT+NRPD  NA  PH + EL  A+++A +D  V ++++TG
Sbjct: 6   PVDSFDTIKYEVD--GHTATITLNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTG 63

Query: 124 KGTEAFCSGGDQALRTRDGYADYENFGRL------NVLDLQVQIRRLPKPVIAMVH 173
            G  AFCSG D      DG   YE              +     R + KPV+  V+
Sbjct: 64  TG-RAFCSGADVKEIPEDGKVIYERPYLSTYDQWEAPQEGTPPFRTMAKPVLTAVN 118

>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3 Length = 264

 Score = 93.8 bits (234), Expect = 5e-24
 Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 4/109 (3%)

Query: 66  TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
             +  + +      G+ +IT  R ++ NA  P   + L R + D      V  ++L G+G
Sbjct: 7   ARYPGLAFAWP-RPGVLEITF-RGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEG 64

Query: 126 TEAFCSGGD-QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
              F +GG    +       +          DL +     P+PV+A V 
Sbjct: 65  -GVFSAGGSFGLIEEMRASHEALLRVFWEARDLVLGPLNFPRPVVAAVE 112

>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A Length = 280

 Score = 94.0 bits (234), Expect = 6e-24
 Identities = 18/117 (15%), Positives = 32/117 (27%), Gaps = 13/117 (11%)

Query: 67  EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
           +   I Y          I +  PD  NA        L      A  +  V   I+   G 
Sbjct: 7   QNEKISYRIE--GPFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSG- 63

Query: 127 EAFCSGGD----------QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
             F SG D             +     + + +      + +     +  K +I  ++
Sbjct: 64  RFFSSGADFKGIAKAQGDDTNKYPSETSKWVSNFVARNVYVTDAFIKHSKVLICCLN 120

>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa} Length = 258

 Score = 93.0 bits (232), Expect = 7e-24
 Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 3/111 (2%)

Query: 63  ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
           E+ +    +  E+     +  I ++R  +RNAF    + +L  A  +          +L 
Sbjct: 6   EANSGPGRVTREQR--GHLFLIGLDRAGKRNAFDSAMLADLALAMGEYERSEESRCAVLF 63

Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
             G E F +G D         A    +    V    V   R  KP++  V 
Sbjct: 64  AHG-EHFTAGLDLMELAPKLAASGFRYPDGGVDPWGVVQPRRSKPLVVAVQ 113

>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis} Length = 287

 Score = 93.4 bits (233), Expect = 1e-23
 Identities = 22/112 (19%), Positives = 39/112 (34%), Gaps = 7/112 (6%)

Query: 66  TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
             ++ +        G+A+I ++ P   N      ++EL        DDSSV VI+ +   
Sbjct: 6   DAYSTLRVSSE--HGVARIILDNPPV-NVIGATMMRELRTVLTTLADDSSVRVIVFSSAD 62

Query: 126 TEAFCSGGD----QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
            E F +  D    + +      A            +   IR  P+  I  + 
Sbjct: 63  PEFFLAHVDMRIGEKMDALQELAASAPADVNVFQAVGELIRHQPQVTIVKLA 114

>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum} Length = 278

 Score = 93.0 bits (232), Expect = 1e-23
 Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 5/113 (4%)

Query: 62  DESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIIL 121
             +G    D + E+        +T+NRP RRNA     ++ ++ A++   +D  +   IL
Sbjct: 13  PANGESGPDALVEQR--GHTLIVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCIL 70

Query: 122 TGKGTEAFCSGGD--QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           TG G   FC+G D   A +   G +  +     + +D  ++ RRL KP+IA V
Sbjct: 71  TGAG-GYFCAGMDLKAATKKPPGDSFKDGSYDPSRIDALLKGRRLKKPLIAAV 122

>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A Length = 256

 Score = 92.6 bits (231), Expect = 1e-23
 Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 13/109 (11%)

Query: 64  SGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG 123
           S  +   ++ +    + +  +T+NRP  RNA          RA +DA++D  V V+I+TG
Sbjct: 4   SMADSPVLLVDTT--DRVRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTG 61

Query: 124 KGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
                FC+G D                     D+  +   + KPVI  +
Sbjct: 62  AD-PVFCAGLDLKELGDTTELP----------DISPKWPDMTKPVIGAI 99

>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis} Length = 263

 Score = 92.2 bits (230), Expect = 2e-23
 Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 7/110 (6%)

Query: 64  SGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG 123
           S T +T I   +    G+  I ++RPD  NA       E++ A  D   D  +G I++TG
Sbjct: 4   SMTTYTTIATSR-PVAGVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTG 62

Query: 124 KGTEAFCSGGD-QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
               AF +G D   + T            L+  D    + ++ KP++A V
Sbjct: 63  SE-RAFAAGADIAEMVTLT-PHQARERNLLSGWD---SLTQVRKPIVAAV 107

>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus} Length = 265

 Score = 91.8 bits (229), Expect = 2e-23
 Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 4/111 (3%)

Query: 63  ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
              T+   +   K   +GIA+I ++   + N++     KE   A +D R D  + V+I+ 
Sbjct: 3   AVETKKQYLTVFKE--DGIAEIHLHIN-KSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVM 59

Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
               + F +G D              F      +   +I R P+  IA + 
Sbjct: 60  SDVPKFFSAGADINFLRSADPRFKTQFCLF-CNETLDKIARSPQVYIACLE 109

>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum} Length = 265

 Score = 91.8 bits (229), Expect = 3e-23
 Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 13/113 (11%)

Query: 62  DESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIIL 121
           + +G    +++ E+   + I  ITINRP  +N+      + L  A +    D+ + V IL
Sbjct: 8   ELNGDTEPEVLVEQR--DRILIITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGIL 65

Query: 122 TGKGTEAFCSGGD--QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           TG G  +FC+G D     R  +   +    G           R   KP+IA V
Sbjct: 66  TGAG-GSFCAGMDLKAFARGENVVVEGRGLGF--------TERPPAKPLIAAV 109

>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi} Length = 263

 Score = 91.6 bits (228), Expect = 3e-23
 Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 9/114 (7%)

Query: 66  TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
           +   D +  + + EG+  +T+ R    +      +  L  A   A  D  V V+++ G G
Sbjct: 2   SLSQDGLLGEVLSEGVLTLTLGRAPA-HPLSRAMIAALHDALRRAMGDDHVHVLVIHGPG 60

Query: 126 TEAFCSGGD------QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
              FC+G D            +G A   +        L + +   PKP IA+V 
Sbjct: 61  -RIFCAGHDLKEIGRHRADPDEGRAFVTDLFEA-CSALMLDLAHCPKPTIALVE 112

>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris} Length = 275

 Score = 91.1 bits (227), Expect = 5e-23
 Identities = 19/108 (17%), Positives = 41/108 (37%), Gaps = 6/108 (5%)

Query: 66  TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
            + + ++ +      +  I +NRP +RNA     +  L     D      +  +++ G G
Sbjct: 13  ADPSTLVVDTV--GPVLTIGLNRPKKRNALNDGLMAALKDCLTDI--PDQIRAVVIHGIG 68

Query: 126 TEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
            + F +G D +        +     +     +  +I+    PVIA + 
Sbjct: 69  -DHFSAGLDLSELRERDATEGLVHSQT-WHRVFDKIQYCRVPVIAALK 114

>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A Length = 261

 Score = 90.3 bits (225), Expect = 8e-23
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 10/111 (9%)

Query: 67  EFTDIIYEKAVGEGIAKI-TINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
            + DI+  K   +G   I    +    N+  P  ++E+  A + A  D    +++L+  G
Sbjct: 3   RYRDIVVRKQ--DGFTHILLSTKSSENNSLNPEVMREVQSALSTAAAD-DSKLVLLSAVG 59

Query: 126 TEAFCSGGD----QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
              FC G D        T D   +        + +      +  KP+I  V
Sbjct: 60  -SVFCCGLDFIYFIRRLTDDRKRESTKMAEA-IRNFVNTFIQFKKPIIVAV 108

>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A* Length = 260

 Score = 89.5 bits (223), Expect = 2e-22
 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 7/107 (6%)

Query: 68  FTDIIYEKAVGE-GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
           F  II EK      +  I +NRP   NA     ++EL +A     +D +VG I+LTG G 
Sbjct: 3   FQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTG-GE 61

Query: 127 EAFCSGGD-QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           +AF +G D + ++ R  + D  +   L+  D    I R+ KPVIA V
Sbjct: 62  KAFAAGADIKEMQNRT-FQDCYSGKFLSHWD---HITRIKKPVIAAV 104

>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3 Length = 291

 Score = 89.3 bits (222), Expect = 3e-22
 Identities = 23/115 (20%), Positives = 44/115 (38%), Gaps = 8/115 (6%)

Query: 63  ESGTEFTDIIYEKAVGEGIAKIT-INRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIIL 121
              + + DI+ +K   +G  +I    R   +NA     +KE++ A N A  D    +++ 
Sbjct: 17  RGSSTYRDIVVKKE--DGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAAD-DSKLVLF 73

Query: 122 TGKGTEAFCSGGD---QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           +  G   FC G D        R+            + +      +  KP++  V+
Sbjct: 74  SAAG-SVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVN 127

>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis} Length = 289

 Score = 89.2 bits (222), Expect = 4e-22
 Identities = 17/110 (15%), Positives = 34/110 (30%), Gaps = 5/110 (4%)

Query: 66  TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
             +  I         +   T N P   N   P  V++L+    +    ++  V+I     
Sbjct: 5   ASYETIKARLD--GTVLSATFNAPPM-NLIGPEVVRDLVALLEELAHPTAPRVVIFDSAD 61

Query: 126 TEAFCSGGDQALRTRDGYADYENFGRLNVLDLQV--QIRRLPKPVIAMVH 173
            + F    D            +  G  +     +  ++ +LP   IA + 
Sbjct: 62  ADFFFPHVDMTKVPEYTAEAAKAGGPGDASLGMLFRKLSQLPAVTIAKLR 111

>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A* Length = 278

 Score = 88.8 bits (221), Expect = 5e-22
 Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 6/126 (4%)

Query: 47  HGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRA 106
           H        +           +  I+ E+   + +  IT+NRP   NA     + E+  A
Sbjct: 3   HHHHHHMGTLEAQTQGPGSMTYETILVERD--QRVGIITLNRPQALNALNSQVMNEVTSA 60

Query: 107 FNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPK 166
             +  DD  +G II+TG   +AF +G D        +AD              ++  +  
Sbjct: 61  ATELDDDPDIGAIIITGSA-KAFAAGADIKEMADLTFADAFTADFFATWG---KLAAVRT 116

Query: 167 PVIAMV 172
           P IA V
Sbjct: 117 PTIAAV 122

>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A Length = 275

 Score = 88.4 bits (220), Expect = 5e-22
 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 11/107 (10%)

Query: 77  VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-- 134
             + +  + +NRP++RNA      +EL+  F     DS    ++++G G + F SG D  
Sbjct: 10  AQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAG-KMFTSGIDLM 68

Query: 135 -----QALRTRDGYADYENFGRLNVLDLQV---QIRRLPKPVIAMVH 173
                      D  A    + R  +   Q     I + PKPVIA +H
Sbjct: 69  DMASDILQPPGDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIH 115

>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A* Length = 261

 Score = 87.2 bits (217), Expect = 1e-21
 Identities = 24/110 (21%), Positives = 42/110 (38%), Gaps = 10/110 (9%)

Query: 67  EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
            +  +         +A I  N   + NA     + +L++A +D      +  IIL     
Sbjct: 2   SYQYVNVVTI--NKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRP-EIRCIILRAPSG 58

Query: 127 E-AFCSGGDQALRTRDGYAD--YENFGRLNVLDLQVQIRRLPKPVIAMVH 173
              F +G D       G     Y++  R     +   I++ PKP+I+MV 
Sbjct: 59  SKVFSAGHDIHELPSGGRDPLSYDDPLR----QITRMIQKFPKPIISMVE 104

>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A Length = 260

 Score = 86.8 bits (216), Expect = 2e-21
 Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 2/103 (1%)

Query: 71  IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFC 130
           ++ E   G G+A +    P   N+     + EL+ +     +D S   +ILT      F 
Sbjct: 5   VLVEPDAGAGVAVMKFKNP-PVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFS 63

Query: 131 SGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           +G D         A Y  + +  V +L +++ +    +++ ++
Sbjct: 64  AGLDLTEMCGRSPAHYAGYWKA-VQELWLRLYQSNLVLVSAIN 105

>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A Length = 262

 Score = 86.1 bits (214), Expect = 3e-21
 Identities = 30/103 (29%), Positives = 41/103 (39%), Gaps = 6/103 (5%)

Query: 71  IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFC 130
           +  EKA    +  + +NRP  RNA    T   L+ AF +   D    V +L G     FC
Sbjct: 13  VRVEKA--GPVTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDN-GTFC 69

Query: 131 SGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           +G D      D   +    G   +        RL KPVIA + 
Sbjct: 70  AGADLKAMGTDRGNELHPHGPGPMGP---SRLRLSKPVIAAIS 109

>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis} Length = 261

 Score = 86.0 bits (214), Expect = 4e-21
 Identities = 21/111 (18%), Positives = 42/111 (37%), Gaps = 6/111 (5%)

Query: 64  SGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG 123
           S      +       + IA  T+N     NA     + ++    +    D ++ V+++ G
Sbjct: 1   SNAMLKFLSVRVE--DHIAVATLNHAPA-NAMSSQVMHDVTELIDQVEKDDNIRVVVIHG 57

Query: 124 KGTEAFCSGGD-QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           +G   F +G D +   +           +L       ++ +  KPVIA +H
Sbjct: 58  EG-RFFSAGADIKEFTSVTEAKQATELAQL-GQVTFERVEKCSKPVIAAIH 106

>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus} Length = 256

 Score = 84.1 bits (209), Expect = 2e-20
 Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 10/102 (9%)

Query: 71  IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFC 130
           ++ E+   + +  ITINRPD RNA      + L  A +     + + V I+TG G   FC
Sbjct: 9   VLIEQR--DRVLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAG-GNFC 65

Query: 131 SGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
           +G D            E                  KP+IA V
Sbjct: 66  AGMDLKAFVSGEAVLSERGLGFT-------NVPPRKPIIAAV 100

>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum} Length = 277

 Score = 83.0 bits (206), Expect = 7e-20
 Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 5/110 (4%)

Query: 64  SGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG 123
            G+    +       +G+A + ++RP   NA      +E++ A ++      +G ++L G
Sbjct: 19  PGSMNEFVSVVAD--QGLATLVVSRPPT-NAMTRQVYREIVAAADELGRRDDIGAVVLFG 75

Query: 124 KGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
            G E F +G D          + +   R   L+    +  +PKP +A V 
Sbjct: 76  -GHEIFSAGDDMPELRTLNAPEADTAAR-VRLEAIDAVAAIPKPTVAAVT 123

>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A* Length = 440

 Score = 82.6 bits (204), Expect = 3e-19
 Identities = 32/134 (23%), Positives = 49/134 (36%), Gaps = 25/134 (18%)

Query: 63  ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
               E   +  E+   +G+A++T+ R DR NA     V ++  A + A  D  V V +L 
Sbjct: 161 TGEVEMEAVHLERR--DGVARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLR 218

Query: 123 G--------KGTEAFCSGGD-------------QALRTRDGYADYENFGRLNVLDLQV-- 159
           G        +G   F +G +               +R   GY      G L   D     
Sbjct: 219 GGVMSHPRYRGKRVFSAGINLKYLSQGGISLVDFLMRRELGYIHKLVRGVLTNDDRPGWW 278

Query: 160 QIRRLPKPVIAMVH 173
              R+ KP +A V 
Sbjct: 279 HSPRIEKPWVAAVD 292

>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} Length = 233

 Score = 78.0 bits (193), Expect = 3e-18
 Identities = 22/103 (21%), Positives = 39/103 (37%), Gaps = 6/103 (5%)

Query: 71  IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFC 130
           + Y     + I  I ++   + N   P   + L  A + A  D +VG +++ G     F 
Sbjct: 7   VTYTHD--DAIGVIRMDDG-KVNVLGPTMQQALNEAIDAADRD-NVGALVIAGNH-RVFS 61

Query: 131 SGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
            G D  + T        +  R    +L  ++   PKPV+    
Sbjct: 62  GGFDLKVLTSGEAKPAIDMLR-GGFELSYRLLSYPKPVVIACT 103

>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans} Length = 556

 Score = 75.4 bits (185), Expect = 1e-16
 Identities = 21/130 (16%), Positives = 41/130 (31%), Gaps = 16/130 (12%)

Query: 58  RIACDESGTEFTDIIYEKAVGEGIAKITINRPDRR----------NAFRPHTVKELIRAF 107
            +      +++            +A + I+  +            N++      EL  A 
Sbjct: 10  PVDYRTDPSQYKHWKLS--FNGPVATLGIDIAEDGGIRDGYKLKLNSYDLGVDIELHDAI 67

Query: 108 NDAR-DDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRL---NVLDLQVQIRR 163
              R +   V  ++LT      FCSG +  +     +A   NF +        L+   R 
Sbjct: 68  QRIRFEHPEVRTVVLTSLKDRVFCSGANIFMLGLSTHAWKVNFCKFTNETRNGLEDSSRH 127

Query: 164 LPKPVIAMVH 173
                +A V+
Sbjct: 128 SGLKFLAAVN 137

>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV} Length = 232

 Score = 71.9 bits (177), Expect = 5e-16
 Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 8/103 (7%)

Query: 71  IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFC 130
           + Y     +G+A +T+N   + NA  P  +     A + A  D    ++I+TG+      
Sbjct: 8   VSYHLD--DGVATLTLNNG-KVNAISPDVIIAFNAALDQAEKD--RAIVIVTGQPG-ILS 61

Query: 131 SGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
            G D  + T    A      + +   L  ++   P P+I    
Sbjct: 62  GGYDLKVMTSSAEAAINLVAQGS--TLARRMLSHPFPIIVACP 102

>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A Length = 305

 Score = 69.8 bits (171), Expect = 6e-15
 Identities = 19/148 (12%), Positives = 40/148 (27%), Gaps = 17/148 (11%)

Query: 40  NDSYHRIHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDR----RNAF 95
           +  +H    +  S   V +     +      II E      +  I ++        R  F
Sbjct: 4   SHHHHHHSQDPNSMSAV-QPFIRTNIGSTLRIIEEPQ--RDVYWIHMHADLAINPGRACF 60

Query: 96  RPHTVKELIRAFN----DARDDSSVGVIILTGKGTEAFCSGGD----QALRTRDGYADYE 147
               V ++                +   ++    ++ F  GGD      L      A   
Sbjct: 61  STRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFCQLIREGDRARLL 120

Query: 148 NFGR--LNVLDLQVQIRRLPKPVIAMVH 173
           ++ +  +  +             IA+V 
Sbjct: 121 DYAQRCVRGVHAFHVGLGARAHSIALVQ 148

>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens} Length = 363

 Score = 68.1 bits (167), Expect = 3e-14
 Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 12/101 (11%)

Query: 80  GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD-QALR 138
               IT+NRP   NA   + ++++         D    +II+ G G +AFC+GGD + + 
Sbjct: 15  CTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVIS 74

Query: 139 --TRDGYADYENFGR----LNVLDLQVQIRRLPKPVIAMVH 173
              +        F R    LN       +    KP +A++H
Sbjct: 75  EAEKAKQKIAPVFFREEYMLNNA-----VGSCQKPYVALIH 110

>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis} Length = 407

 Score = 67.1 bits (164), Expect = 1e-13
 Identities = 29/153 (18%), Positives = 57/153 (37%), Gaps = 14/153 (9%)

Query: 32  IGLNNASMNDSYHRIHGEVPSHDVVWRIACDESGTEFTDIIYEK---AVGEGIAKITINR 88
           +G ++   + S  R +     H          S     +++++    A G+ +  +T+N 
Sbjct: 1   MGSSHHHHHHSSGRENLYFQGHMTNLVDKAAHSFAT-QNVVFQTLATASGKLVGVVTLNV 59

Query: 89  PDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD------QALRTRDG 142
               NA     V+ +    N  + D  +  ++L G G +AFC+GGD       ++  +  
Sbjct: 60  EKALNALDLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAKGQ 119

Query: 143 YADY--ENFGRLNVLDLQVQIRRLPKPVIAMVH 173
             +     F     LD    +    KPV+    
Sbjct: 120 VTEVAKVFFEEEYRLDY--LLHTYGKPVLVWGD 150

>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana} Length = 725

 Score = 59.2 bits (144), Expect = 6e-11
 Identities = 20/109 (18%), Positives = 41/109 (37%), Gaps = 9/109 (8%)

Query: 69  TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEA 128
              + E   G+G+A IT+  P   N+     +  L   + +A   + V  I++TG     
Sbjct: 7   GKTVMEV-GGDGVAVITLINP-PVNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAK-GR 63

Query: 129 FCSGGD----QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           F  G D      ++  +       +  ++   +   +    KP +A + 
Sbjct: 64  FSGGFDISGFGEMQKGNVKEPKAGYISID--IITDLLEAARKPSVAAID 110

>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A* Length = 715

 Score = 57.6 bits (140), Expect = 2e-10
 Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 10/105 (9%)

Query: 75  KAVGEGIAKITINRPDRR-NAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGG 133
            A+  GI ++  +      N F   T+ EL +A +  + D+SV  +I++    + F  G 
Sbjct: 11  TALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSSGK-DVFIVGA 69

Query: 134 D----QALRTRDGYADYENFGRLN-VLDLQVQIRRLPKPVIAMVH 173
           D                      N +         L  P +A ++
Sbjct: 70  DITEFVENFKLPDAELIAGNLEANKIFS---DFEDLNVPTVAAIN 111

>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A* Length = 742

 Score = 52.3 bits (126), Expect = 1e-08
 Identities = 24/112 (21%), Positives = 40/112 (35%), Gaps = 17/112 (15%)

Query: 66  TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
              + +     +   +A I +  P   NA  P  ++E+      A  D +V  I++ G  
Sbjct: 16  PRGSHMAEYLRLPHSLAMIRLCNP-PVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGAN 74

Query: 126 TEAFCSGGDQALRTRDGYADYENFGRLNV-LDLQVQIRRL---PKPVIAMVH 173
              FC+G           AD   F      L L   +  +    KPV+A + 
Sbjct: 75  -GNFCAG-----------ADIHGFSAFTPGLALGSLVDEIQRYQKPVLAAIQ 114

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	175
4fzw_C	274	1,2-epoxyphenylacetyl-COA isomerase; structural ge	99.93
3hrx_A	254	Probable enoyl-COA hydratase; the spiral fold, the	99.93
4fzw_A	258	2,3-dehydroadipyl-COA hydratase; structural genomi	99.92
3t89_A	289	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	99.92
4hdt_A	353	3-hydroxyisobutyryl-COA hydrolase; ssgcid, carniti	99.92
3kqf_A	265	Enoyl-COA hydratase/isomerase family protein; IDP0	99.92
3i47_A	268	Enoyl COA hydratase/isomerase (crotonase); structu	99.91
3pea_A	261	Enoyl-COA hydratase/isomerase family protein; stru	99.91
4eml_A	275	Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coe	99.91
3t8b_A	334	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	99.91
3t3w_A	279	Enoyl-COA hydratase; ssgcid, structural genomics,	99.91
3njd_A	333	Enoyl-COA hydratase; ssgcid, mycobacerium smegmati	99.91
2j5g_A	263	ALR4455 protein; enzyme evolution, C-C bond hydrol	99.91
3lke_A	263	Enoyl-COA hydratase; nysgrc, target 112 structural	99.91
3fdu_A	266	Putative enoyl-COA hydratase/isomerase; structural	99.9
3g64_A	279	Putative enoyl-COA hydratase; alpha-beta structure	99.9
2vx2_A	287	Enoyl-COA hydratase domain-containing protein 3; i	99.9
3myb_A	286	Enoyl-COA hydratase; ssgcid, struct genomics, seat	99.9
3hin_A	275	Putative 3-hydroxybutyryl-COA dehydratase; structu	99.9
3gow_A	254	PAAG, probable enoyl-COA hydratase; the spiral fol	99.9
3l3s_A	263	Enoyl-COA hydratase/isomerase family protein; crot	99.9
3qmj_A	256	Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid,	99.9
3sll_A	290	Probable enoyl-COA hydratase/isomerase; structural	99.9
2a7k_A	250	CARB; crotonase, antibiotic, beta-lactam, biosynth	99.9
3hp0_A	267	Putative polyketide biosynthesis enoyl-COA hydrata	99.9
1nzy_A	269	Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogen	99.9
1ef8_A	261	Methylmalonyl COA decarboxylase; lyase; 1.85A {Esc	99.9
3moy_A	263	Probable enoyl-COA hydratase; ssgcid, seattle stru	99.9
2ej5_A	257	Enoyl-COA hydratase subunit II; structural genomic	99.9
1pjh_A	280	Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral	99.9
1szo_A	257	6-oxocamphor hydrolase; enzyme-product complex; HE	99.9
3gkb_A	287	Putative enoyl-COA hydratase; structural genomics,	99.9
2uzf_A	273	Naphthoate synthase; lyase, menaquinone biosynthes	99.89
4di1_A	277	Enoyl-COA hydratase ECHA17; structural genomics, s	99.89
3p5m_A	255	Enoyl-COA hydratase/isomerase; seattle structural	99.89
2f6q_A	280	Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxis	99.89
3h81_A	278	Enoyl-COA hydratase ECHA8; niaid, decode, infectio	99.89
3qre_A	298	Enoyl-COA hydratase, ECHA12_1; structural genomics	99.89
2j5i_A	276	P-hydroxycinnamoyl COA hydratase/lyase; vanillin,	99.89
3he2_A	264	Enoyl-COA hydratase ECHA6; fatty acid metabolism,	99.89
2pbp_A	258	Enoyl-COA hydratase subunit I; B-oxidation, struct	99.89
3isa_A	254	Putative enoyl-COA hydratase/isomerase; structural	99.89
3rrv_A	276	Enoyl-COA hydratase/isomerase; structural genomics	99.89
3lao_A	258	Enoyl-COA hydratase/isomerase; alpha-beta sandwich	99.89
1dci_A	275	Dienoyl-COA isomerase; lyase; 1.50A {Rattus norveg	99.89
2ppy_A	265	Enoyl-COA hydratase; beta-oxidation, fatty acid me	99.89
3qxz_A	265	Enoyl-COA hydratase/isomerase; structural genomics	99.89
3tlf_A	274	Enoyl-COA hydratase/isomerase; structural genomics	99.89
3oc7_A	267	Enoyl-COA hydratase; seattle structural genomics c	99.88
3pe8_A	256	Enoyl-COA hydratase; emerald biostructures, struct	99.88
3rsi_A	265	Putative enoyl-COA hydratase/isomerase; structural	99.88
3bpt_A	363	3-hydroxyisobutyryl-COA hydrolase; coenzyme A, bet	99.88
3r9q_A	262	Enoyl-COA hydratase/isomerase; ssgcid, lyase,isome	99.88
3r6h_A	233	Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium m	99.88
3swx_A	265	Probable enoyl-COA hydratase/isomerase; structural	99.88
3ju1_A	407	Enoyl-COA hydratase/isomerase family protein; alph	99.88
3r9t_A	267	ECHA1_1; ssgcid, seattle structural genomics cente	99.88
3qk8_A	272	Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SB	99.88
1hzd_A	272	AUH, AU-binding protein/enoyl-COA hydratase; RNA-b	99.88
3h0u_A	289	Putative enoyl-COA hydratase; structural genomics,	99.88
2fbm_A	291	Y chromosome chromodomain protein 1, telomeric IS;	99.88
1uiy_A	253	Enoyl-COA hydratase; lyase, beta-oxidation, croton	99.88
1wz8_A	264	Enoyl-COA hydratase; lyase, crotonase, hexamer, st	99.87
2gtr_A	261	CDY-like, chromodomain Y-like protein; structural	99.87
4f47_A	278	Enoyl-COA hydratase ECHA19; ssgcid, seattle struct	99.87
1sg4_A	260	3,2-trans-enoyl-COA isomerase, mitochondrial; crot	99.87
2q35_A	243	CURF; crotonase, lyase; 1.65A {Lyngbya majuscula}	99.86
3ot6_A	232	Enoyl-COA hydratase/isomerase family protein; stru	99.86
3qxi_A	265	Enoyl-COA hydratase ECHA1; structural genomics, se	99.85
1mj3_A	260	Enoyl-COA hydratase, mitochondrial; homohexamer, l	99.85
3trr_A	256	Probable enoyl-COA hydratase/isomerase; ssgcid, st	99.85
2np9_A	440	DPGC; protein inhibitor complex, oxidoreductase; H	99.84
3m6n_A	305	RPFF protein; enoyl-COA hydratase, lyase; 1.80A {X	99.83
3zwc_A	742	Peroxisomal bifunctional enzyme; beta oxidation pa	99.82
2w3p_A	556	Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri	99.82
1wdk_A	715	Fatty oxidation complex alpha subunit; alpha2BETA2	99.79
2wtb_A	725	MFP2, fatty acid multifunctional protein (ATMFP2);	99.77
3bf0_A	593	Protease 4; bacterial, hydrolase, inner membrane,	98.63
3rst_A	240	Signal peptide peptidase SPPA; alpha/beta protein	98.4
3viv_A	230	441AA long hypothetical NFED protein; protein-pept	97.97
2f9y_B	304	Acetyl-coenzyme A carboxylase carboxyl transferas	97.44
1y7o_A	218	ATP-dependent CLP protease proteolytic subunit; hy	95.23
2f9i_A	327	Acetyl-coenzyme A carboxylase carboxyl transferase	92.96
2f9y_A	339	Acetyl-COA carboxylase, carboxyltransferase alpha;	90.67
2cby_A	208	ATP-dependent CLP protease proteolytic subunit 1;	90.01
1oi7_A	288	Succinyl-COA synthetase alpha chain; SCS, ligase,	86.18
2nu8_A	288	Succinyl-COA ligase [ADP-forming] subunit alpha; c	85.38
2yv2_A	297	Succinyl-COA synthetase alpha chain; COA-binding d	84.96
2yv1_A	294	Succinyl-COA ligase [ADP-forming] subunit alpha; C	82.94
2fp4_A	305	Succinyl-COA ligase [GDP-forming] alpha-chain, mit	80.23

>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}

Probab=99.93  E-value=1.1e-25  Score=183.88  Aligned_cols=108  Identities=29%  Similarity=0.459  Sum_probs=84.6

Q ss_pred             CCCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCcc
Q 030574           65 GTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYA  144 (175)
Q Consensus        65 ~~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~  144 (175)
                      +.-++.|.++.  ++||++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++......
T Consensus        11 GsM~e~il~~~--~~gVa~itlnRP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~G-~~FcaG~Dl~~~~~~~~~   87 (274)
T 4fzw_C           11 GSMMEFILSHV--EKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAG-RGFCAGQDLNDRNVDPTG   87 (274)
T ss_dssp             -----CEEEEE--ETTEEEEEECCTTTTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESS-SCSBCCBCCC--------
T ss_pred             ccccccEEEEE--ECCEEEEEEcCcCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CceeCCcChHhhhccccc
Confidence            44456688887  899999999999999999999999999999999999999999999999 999999999987543221


Q ss_pred             ---chhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          145 ---DYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       145 ---~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                         +........++.++.+|.++|||+||+|||+
T Consensus        88 ~~~~~~~~~~~~~~~l~~~l~~~~kPvIAav~G~  121 (274)
T 4fzw_C           88 PAPDLGMSVERFYNPLVRRLAKLPKPVICAVNGV  121 (274)
T ss_dssp             -CCCHHHHHHHTHHHHHHHHHHCSSCEEEEECSC
T ss_pred             cchHHHHHHHHHHHHHHHHHHHCCCCEEEEECCc
Confidence               2222233345678889999999999999996

>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}

Probab=99.93  E-value=1.4e-25  Score=181.26  Aligned_cols=100  Identities=24%  Similarity=0.356  Sum_probs=87.6

Q ss_pred             EEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhh
Q 030574           71 IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFG  150 (175)
Q Consensus        71 v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~  150 (175)
                      |++|+  +|+|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++........  ..
T Consensus         2 vl~E~--~dgVa~itlnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~--~~   76 (254)
T 3hrx_A            2 VLKER--QDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAG-RAFSAGQDLTEFGDRKPDYE--AH   76 (254)
T ss_dssp             EEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TCSBCCBCGGGTTTSCCCHH--HH
T ss_pred             eEEEE--ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEeCCC-CCcccCccHHHhcccchhhH--HH
Confidence            67888  899999999999999999999999999999999999999999999999 99999999998865433322  22


Q ss_pred             HhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          151 RLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       151 ~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ...++.++.+|.++|||+||+|||+
T Consensus        77 ~~~~~~~~~~l~~~~kPvIAav~G~  101 (254)
T 3hrx_A           77 LRRYNRVVEALSGLEKPLVVAVNGV  101 (254)
T ss_dssp             THHHHHHHHHHHTCSSCEEEEECSE
T ss_pred             HHHHHHHHHHHHhCCCCEEEEECCE
Confidence            2346778889999999999999995

>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}

Probab=99.92  E-value=1.4e-25  Score=181.85  Aligned_cols=103  Identities=24%  Similarity=0.382  Sum_probs=87.6

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccch
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADY  146 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~  146 (175)
                      +++.|.+++  +++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++....... 
T Consensus         3 ~ms~l~ve~--~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~~~~-   78 (258)
T 4fzw_A            3 SMSELIVSR--QQRVLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNA-RFFAAGADLNEMAEKDLAA-   78 (258)
T ss_dssp             --CEEEEEE--ETTEEEEEEECGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCS-SEEEECBCHHHHHTCCHHH-
T ss_pred             CCCcEEEEE--ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEeCCC-CceeCCCchhhhccchhhh-
Confidence            455689998  899999999999999999999999999999999999999999999999 9999999999876532221 


Q ss_pred             hhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          147 ENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       147 ~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                        ........++.+|.++|||+||+|||+
T Consensus        79 --~~~~~~~~~~~~l~~~~kPvIAav~G~  105 (258)
T 4fzw_A           79 --TLNDTRPQLWARLQAFNKPLIAAVNGY  105 (258)
T ss_dssp             --HHTCSHHHHHHHHHTCCSCEEEEECSE
T ss_pred             --HHHhHHHHHHHHHHHCCCCEEEEEcCc
Confidence              112234577888999999999999995

>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A

Probab=99.92  E-value=4.6e-25  Score=181.56  Aligned_cols=117  Identities=59%  Similarity=0.878  Sum_probs=90.2

Q ss_pred             ccchhhhhccCCCCCcccEEEEEEeC-CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccC
Q 030574           53 HDVVWRIACDESGTEFTDIIYEKAVG-EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCS  131 (175)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~v~~e~~~~-~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~Fca  131 (175)
                      .|..|-    ...+.++.|.++.  + ++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|+++||+
T Consensus        15 ~p~~~~----~~~~~~~~v~~~~--~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~~Fca   88 (289)
T 3t89_A           15 APVEWH----DCSEGFEDIRYEK--STDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCS   88 (289)
T ss_dssp             SCCCEE----ECCTTCSSEEEEE--ETTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEEC
T ss_pred             CCcccc----ccCCCCCeEEEEE--ecCCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCccC
Confidence            455563    2356788899998  6 99999999999999999999999999999999999999999999999669999


Q ss_pred             CCCCCccccCCc-cchhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          132 GGDQALRTRDGY-ADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       132 G~Dl~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      |+|++++..... ..........++.++.+|.++|||+||+|||+
T Consensus        89 G~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~  133 (289)
T 3t89_A           89 GGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGY  133 (289)
T ss_dssp             CBCCC----------------CTHHHHHHHHHHCSSCEEEEECSE
T ss_pred             CCChhhhhccccchhhhHHHHHHHHHHHHHHHcCCCCEEEEECCE
Confidence            999998754221 11111122235677888999999999999995

>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}

Probab=99.92  E-value=4.1e-25  Score=186.41  Aligned_cols=107  Identities=24%  Similarity=0.405  Sum_probs=89.8

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCcc--
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYA--  144 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~--  144 (175)
                      .++.|+++.  +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|+++||+|+|++++......  
T Consensus         7 ~~e~vl~e~--~~~Va~itLnrP~~~NAl~~~m~~~l~~al~~~~~d~~vr~vvltg~G~~~FcaG~Dl~~~~~~~~~~~   84 (353)
T 4hdt_A            7 KNEDVLVNV--EGGVGLLTLNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSAKADG   84 (353)
T ss_dssp             -CCSEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSBSBCCBCHHHHHHHHHTTS
T ss_pred             CCCcEEEEE--ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEeCCCCCEecCcCHHHHhhccchhh
Confidence            456799998  8999999999999999999999999999999999999999999999997899999999987542211  


Q ss_pred             chhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          145 DYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       145 ~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ..........+.++.+|.++|||+||+|||+
T Consensus        85 ~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~  115 (353)
T 4hdt_A           85 AEARRFWFDEYRLNAHIGRYPKPYVSIMDGI  115 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCSSCEEEEECBE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCEEEEeECc
Confidence            1111222235678889999999999999995

>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}

Probab=99.92  E-value=5e-25  Score=179.14  Aligned_cols=108  Identities=24%  Similarity=0.389  Sum_probs=91.3

Q ss_pred             CCCcccEEEE-EEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc
Q 030574           65 GTEFTDIIYE-KAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY  143 (175)
Q Consensus        65 ~~~~~~v~~e-~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~  143 (175)
                      +++++.|.++ .  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.|+++||+|+|++++.....
T Consensus         4 mm~~~~v~~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~   81 (265)
T 3kqf_A            4 MLQLQNISVDYA--TPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMNE   81 (265)
T ss_dssp             ---CCSEEEECC--STTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCHHHHTTCCH
T ss_pred             cccCCeEEEEEe--eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCeeeeCcChHHHhccCH
Confidence            4678889998 6  899999999999999999999999999999999999999999999999889999999998865432


Q ss_pred             cchhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          144 ADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       144 ~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .... .....++.++.+|.++|||+||+|||+
T Consensus        82 ~~~~-~~~~~~~~~~~~l~~~~kPvIAav~G~  112 (265)
T 3kqf_A           82 EQVR-HAVSMIRTTMEMVEQLPQPVIAAINGI  112 (265)
T ss_dssp             HHHH-HHHHHHHHHHHHHHTCSSCEEEEECSE
T ss_pred             HHHH-HHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence            2222 222345778889999999999999995

>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0

Probab=99.91  E-value=1e-24  Score=177.67  Aligned_cols=107  Identities=28%  Similarity=0.427  Sum_probs=89.4

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCcc-
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYA-  144 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~-  144 (175)
                      |+++.|.+++  +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++...... 
T Consensus         1 M~~~~v~~~~--~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~   77 (268)
T 3i47_A            1 MSLSDLLYEI--QDKVGLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANG-KHFSAGADLTWMQSMANFT   77 (268)
T ss_dssp             -CCCSEEEEE--ETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECS-SCSBCSBCHHHHHHHHTCC
T ss_pred             CCCCEEEEEE--ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCC-CCeeCCCChhhhhcccccc
Confidence            3467799988  899999999999999999999999999999999999999999999999 999999999987542111 


Q ss_pred             -chhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          145 -DYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       145 -~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                       .........+..++.+|.++|||+||+|||+
T Consensus        78 ~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  109 (268)
T 3i47_A           78 EEENLEDSLVLGNLMYSISQSPKPTIAMVQGA  109 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCSSCEEEEECSE
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence             1111122235678889999999999999995

>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}

Probab=99.91  E-value=3.6e-24  Score=173.73  Aligned_cols=104  Identities=20%  Similarity=0.242  Sum_probs=89.0

Q ss_pred             cccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchh
Q 030574           68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYE  147 (175)
Q Consensus        68 ~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~  147 (175)
                      ++.|.+++  +++|++|+||||++ |+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++.........
T Consensus         5 ~~~v~~~~--~~~v~~itlnrp~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~   80 (261)
T 3pea_A            5 LKFLSVRV--EDHIAVATLNHAPA-NAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEG-RFFSAGADIKEFTSVTEAKQA   80 (261)
T ss_dssp             CSSEEEEE--ETTEEEEEECCTTT-TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TCSBCCBCGGGSSTTCCHHHH
T ss_pred             ccceEEEE--ECCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CceeCCcCHHHHhhcCchhHH
Confidence            45788988  89999999999999 999999999999999999999999999999999 999999999998764432222


Q ss_pred             hhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          148 NFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       148 ~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .......+.++.+|.++|||+||+|||+
T Consensus        81 ~~~~~~~~~~~~~l~~~~kPvIAav~G~  108 (261)
T 3pea_A           81 TELAQLGQVTFERVEKCSKPVIAAIHGA  108 (261)
T ss_dssp             HHHHHHHHHHHHHHHTCSSCEEEEECSE
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence            2223334667888999999999999995

>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}

Probab=99.91  E-value=9.7e-25  Score=178.42  Aligned_cols=108  Identities=57%  Similarity=0.897  Sum_probs=85.2

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEec-----CCCCcccCCCCCCcccc
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG-----KGTEAFCSGGDQALRTR  140 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG-----~g~~~FcaG~Dl~~~~~  140 (175)
                      ++++.|.++.  +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||||     .|+++||+|+|++++..
T Consensus         7 ~~~~~v~~~~--~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~~~~~G~~~F~aG~Dl~~~~~   84 (275)
T 4eml_A            7 KHYDDILYYK--AGGIAKIVINRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSVRGE   84 (275)
T ss_dssp             EECSSEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTSCCEEECCBCCC----
T ss_pred             cCCceEEEEE--ECCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCcCcCCCCceeCCcChhhhhc
Confidence            4567899988  8999999999999999999999999999999999999999999999     88569999999998865


Q ss_pred             CCccchhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          141 DGYADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .............++.++.+|.++|||+||+|||+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  119 (275)
T 4eml_A           85 GGYIDDQGTPRLNVLDLQRLIRSMPKVVIALVAGY  119 (275)
T ss_dssp             ----------CCCHHHHHHHHHHSSSEEEEEECSE
T ss_pred             ccccchhhHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence            32211111112234677888999999999999995

>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A

Probab=99.91  E-value=2.6e-24  Score=180.28  Aligned_cols=123  Identities=46%  Similarity=0.824  Sum_probs=94.6

Q ss_pred             ccccchhhhhccCCCCCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCC---
Q 030574           51 PSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE---  127 (175)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~---  127 (175)
                      ...|..|...  +...+|++|.++++.+++|++|+||||+++|+|+.+|+.+|.++|+.++.|+++|+|||||.|++   
T Consensus        39 ~~~p~~w~~~--~~~~~~~~i~~~~~~~~gVa~ItlnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvVVltG~G~~~~~  116 (334)
T 3t8b_A           39 PFDAKAWRLV--DGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKD  116 (334)
T ss_dssp             SCCGGGEEEC--TTCTTCSSEEEEEESSSSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTT
T ss_pred             cCCccccccc--cccCCCceEEEEEeccCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCCCcCC
Confidence            3567888632  11235888999984459999999999999999999999999999999999999999999999954   


Q ss_pred             ---cccCCCCCCccccCCcc----------chhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          128 ---AFCSGGDQALRTRDGYA----------DYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       128 ---~FcaG~Dl~~~~~~~~~----------~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                         +||+|+|++++......          .........+++++.+|.++||||||+|||+
T Consensus       117 ~~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  177 (334)
T 3t8b_A          117 GGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGW  177 (334)
T ss_dssp             CCCEEECCSCTTTTC----------------------CCHHHHHHHHHHSSSEEEEEECSE
T ss_pred             CCCcccCCCCHHHhhcccccccccccchhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCc
Confidence               89999999987532210          0001112234577888999999999999995

>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A

Probab=99.91  E-value=2.3e-24  Score=176.44  Aligned_cols=108  Identities=31%  Similarity=0.402  Sum_probs=84.6

Q ss_pred             CCCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCcc
Q 030574           65 GTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYA  144 (175)
Q Consensus        65 ~~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~  144 (175)
                      .+.++.|.+++  +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++......
T Consensus        16 ~~~~~~v~~~~--~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G-~~F~aG~Dl~~~~~~~~~   92 (279)
T 3t3w_A           16 QRTEMYIDYDV--SDRIATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANG-KHFSAGHDLRGGGPVPDK   92 (279)
T ss_dssp             ---CCSEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECS-SCSBCCBCCC--------
T ss_pred             cccCCeEEEEE--ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCC-CceeeccChHhhhhcccc
Confidence            34567899998  799999999999999999999999999999999999999999999999 899999999987653211


Q ss_pred             -chhh---hhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          145 -DYEN---FGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       145 -~~~~---~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                       ....   .....+++++.+|.++|||+||+|||+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  127 (279)
T 3t3w_A           93 LTLEFIYAHESRRYLEYSLRWRNVPKPSIAAVQGR  127 (279)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHCSSCEEEEECSE
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence             1111   111224567788999999999999995

>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A

Probab=99.91  E-value=2.1e-24  Score=180.71  Aligned_cols=107  Identities=26%  Similarity=0.380  Sum_probs=83.9

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccc
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYAD  145 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~  145 (175)
                      .+|+.|.+++  +++|++|+||||+++|+|+.+|+.+|.++|+.++.|+++|+|||+|.| ++||+|+||+++.......
T Consensus        32 ~~~~~i~~e~--~~~Va~ItLnrP~~~NAl~~~m~~eL~~al~~~~~d~~vrvvVltG~G-~~FcaG~Dl~~~~~~~~~~  108 (333)
T 3njd_A           32 DNLKTMTYEV--TDRVARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRG-EGFCAGFDLSAYAEGSSSA  108 (333)
T ss_dssp             TSCSSEEEEE--ETTEEEEEECCGGGTTCBCTHHHHHHHHHHHHHHHCTTCCEEEEEEST-TSSBCCBC-----------
T ss_pred             CCCCeEEEEE--ECCEEEEEeCCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCC-CceecCcCHHHHhhccccc
Confidence            5678899998  899999999999999999999999999999999999999999999999 8999999999875432110


Q ss_pred             -----------------------------hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 -----------------------------YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 -----------------------------~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                                                   ........++.++.+|.+++||+||+|||+
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~  167 (333)
T 3njd_A          109 GGGSPYEGTVLSGKTQALNHLPDEPWDPMVDYQMMSRFVRGFASLMHCDKPTVVKIHGY  167 (333)
T ss_dssp             ----CCTTSTTCHHHHHHTTCSSSCCCHHHHHHHHHHHHHHHTHHHHSSSCEEEEECSE
T ss_pred             ccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence                                         000112234566778999999999999995

>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D

Probab=99.91  E-value=4.2e-24  Score=173.70  Aligned_cols=107  Identities=21%  Similarity=0.272  Sum_probs=89.0

Q ss_pred             CCcccEEEEEEeCC-CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCcc
Q 030574           66 TEFTDIIYEKAVGE-GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYA  144 (175)
Q Consensus        66 ~~~~~v~~e~~~~~-~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~  144 (175)
                      ..++.|.+++  ++ +|++|+||||++.|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++......
T Consensus        20 ~~~~~i~~~~--~~~~Va~ItLnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~~~   96 (263)
T 2j5g_A           20 TKYENLHFHR--DENGILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSG-DAWMAEIDFPSLGDVTNP   96 (263)
T ss_dssp             GSCTTEEEEE--CTTCEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBT-TEEECEECSGGGCCTTSH
T ss_pred             CCCCeEEEEE--cCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCC-CCcccCcCHHHHhccCCH
Confidence            4567799988  67 9999999999999999999999999999999999999999999999 899999999987653221


Q ss_pred             chhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          145 DYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       145 ~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .........+++++.++.++|||+||+|||+
T Consensus        97 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  127 (263)
T 2j5g_A           97 REWDKTYWEGKKVLQNLLDIEVPVISAVNGA  127 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCSCEEEEECSE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCEEEEECCc
Confidence            1111112234677888999999999999995

>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}

Probab=99.91  E-value=2.6e-24  Score=174.71  Aligned_cols=106  Identities=18%  Similarity=0.207  Sum_probs=89.1

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcc-cCCCCCCcccc----
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAF-CSGGDQALRTR----  140 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~F-caG~Dl~~~~~----  140 (175)
                      |+++.|.+++  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||||.| ++| |+|+|++++..    
T Consensus         1 Ms~~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~FF~aG~Dl~~~~~~~~~   77 (263)
T 3lke_A            1 MSLSYVHTEI--QNDALYITLDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKH-RAYFSSGPRLEDLLICASD   77 (263)
T ss_dssp             --CCSEEEEE--CSSEEEEEECCGGGTTBCCHHHHHHHHHHHHHHHHCSSCCEEEEEESC-TTEEECBSCHHHHHHHHHC
T ss_pred             CCCcEEEEEE--ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEEcCC-CceEecCcCHHHHHhhccc
Confidence            3566799988  899999999999999999999999999999999999999999999999 888 99999998765    


Q ss_pred             CCccchhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          141 DGYADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ........ ....+++++.+|.++|||+||+|||+
T Consensus        78 ~~~~~~~~-~~~~~~~~~~~l~~~~kPvIAav~G~  111 (263)
T 3lke_A           78 QSDVRLRE-VLHVLNHCVLEIFTSPKVTVALINGY  111 (263)
T ss_dssp             SSSHHHHH-HHHHHHHHHHHHHTCSSEEEEEECSE
T ss_pred             CCHHHHHH-HHHHHHHHHHHHHhCCCCEEEEECCE
Confidence            12222122 22335778889999999999999995

>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}

Probab=99.90  E-value=3.2e-24  Score=174.54  Aligned_cols=104  Identities=24%  Similarity=0.331  Sum_probs=88.6

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccc---cCCc
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRT---RDGY  143 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~---~~~~  143 (175)
                      .++.|.++.  +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.   ....
T Consensus         3 ~~~~v~~~~--~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~   79 (266)
T 3fdu_A            3 LHPHLNANL--EGGVLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAE-HDFTAGNDMKDFMGFVQNPN   79 (266)
T ss_dssp             CCTTEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESS-SCSBCCBCHHHHHHHHHSCC
T ss_pred             CCCeEEEEE--ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCC-CCeECCcCHHHHhhhccccc
Confidence            456789988  899999999999999999999999999999999999999999999999 8999999999876   3322


Q ss_pred             cchhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          144 ADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       144 ~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ...  .....++.++.+|.++|||+||+|||+
T Consensus        80 ~~~--~~~~~~~~~~~~l~~~~kPvIAav~G~  109 (266)
T 3fdu_A           80 AGP--AGQVPPFVLLKSAARLSKPLIIAVKGV  109 (266)
T ss_dssp             CSC--GGGSHHHHHHHHHHHCCSCEEEEECSE
T ss_pred             hhh--HHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence            211  112235677889999999999999995

>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}

Probab=99.90  E-value=4.8e-24  Score=174.45  Aligned_cols=107  Identities=26%  Similarity=0.360  Sum_probs=90.5

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccc
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYAD  145 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~  145 (175)
                      ++++.|.+++  +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++.......
T Consensus        14 ~~~~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~   90 (279)
T 3g64_A           14 PEWRHLRVEI--TDGVATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEG-RGFCSGGDVDEIIGATLSM   90 (279)
T ss_dssp             SCCSSEEEEE--ETTEEEEEESCGGGTTCBCHHHHHHHHHHHHHHHHTTCCSEEEEEECS-SCSBCCBCTTTTHHHHTTC
T ss_pred             CCCCeEEEEE--ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CceecCcCHHHHhhccccc
Confidence            5577899998  799999999999999999999999999999999999999999999999 8999999999876432211


Q ss_pred             ---hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 ---YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ---~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                         ........++.++.+|.++|||+||+|||+
T Consensus        91 ~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  123 (279)
T 3g64_A           91 DTARLLDFNRMTGQVVRAVRECPFPVIAALHGV  123 (279)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSE
T ss_pred             hhhHHHHHHHHHHHHHHHHHhCCCCEEEEEcCe
Confidence               111122335678889999999999999995

>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}

Probab=99.90  E-value=6.3e-24  Score=174.59  Aligned_cols=107  Identities=28%  Similarity=0.362  Sum_probs=87.5

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccc
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYAD  145 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~  145 (175)
                      .+...|.++.  +++|++|+||||+++|+||.+|+.+|.++|+.++.|+++|+|||+|.| ++||+|+|++++.......
T Consensus        30 ~~~~~v~~~~--~~~V~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~~~~  106 (287)
T 2vx2_A           30 SEPRPTSARQ--LDGIRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEG-PVFSSGHDLKELTEEQGRD  106 (287)
T ss_dssp             --CCSEEEEE--ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHTTTTCTTCCEEEEEESS-SEEECCSCCC-CCGGGCHH
T ss_pred             CCCcceEEEE--ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCC-CCccCCcCHHHHhcccchh
Confidence            3446788988  799999999999999999999999999999999999999999999999 9999999999875432111


Q ss_pred             hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ........+++++.+|.++|||+||+|||+
T Consensus       107 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  136 (287)
T 2vx2_A          107 YHAEVFQTCSKVMMHIRNHPVPVIAMVNGL  136 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSSCEEEEECSE
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence            111122235677889999999999999995

>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}

Probab=99.90  E-value=4.4e-24  Score=175.41  Aligned_cols=102  Identities=31%  Similarity=0.493  Sum_probs=88.0

Q ss_pred             EEEEEEeC--CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhh
Q 030574           71 IIYEKAVG--EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYEN  148 (175)
Q Consensus        71 v~~e~~~~--~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~  148 (175)
                      |.+++  +  ++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++..........
T Consensus        26 v~~~~--~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G-~~F~aG~Dl~~~~~~~~~~~~~  102 (286)
T 3myb_A           26 LLLQD--RDERGVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASG-KAFCAGHDLKEMRAEPSREYYE  102 (286)
T ss_dssp             SEEEE--ECTTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECS-SCSBCCBCHHHHHSSCCHHHHH
T ss_pred             EEEEE--ecCCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCC-CCccCCcChhhhhccccHHHHH
Confidence            88888  6  99999999999999999999999999999999999999999999999 9999999999886632222222


Q ss_pred             hhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          149 FGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       149 ~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .....+++++.+|.++|||+||+|||+
T Consensus       103 ~~~~~~~~~~~~l~~~~kPvIAav~G~  129 (286)
T 3myb_A          103 KLFARCTDVMLAIQRLPAPVIARVHGI  129 (286)
T ss_dssp             HHHHHHHHHHHHHHHSSSCEEEEECSC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEECCe
Confidence            223346778889999999999999996

>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}

Probab=99.90  E-value=5.4e-24  Score=174.05  Aligned_cols=105  Identities=18%  Similarity=0.248  Sum_probs=89.2

Q ss_pred             CCCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCcc
Q 030574           65 GTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYA  144 (175)
Q Consensus        65 ~~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~  144 (175)
                      .|.++.|.+++  +++|++|+||||+++|+||.+|+.+|.++++.+  |+++|+|||+|.| ++||+|+|++++......
T Consensus        12 ~m~~~~v~~~~--~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~--d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~   86 (275)
T 3hin_A           12 IADPSTLVVDT--VGPVLTIGLNRPKKRNALNDGLMAALKDCLTDI--PDQIRAVVIHGIG-DHFSAGLDLSELRERDAT   86 (275)
T ss_dssp             CCCGGGEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHTSSC--CTTCCEEEEEESS-SCSBCCBCGGGCCCCCHH
T ss_pred             cCCCCeEEEEE--ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHh--CcCceEEEEECCC-CCccCCCCHHHHhccChh
Confidence            36678899998  799999999999999999999999999999999  5789999999999 899999999988763322


Q ss_pred             chhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          145 DYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       145 ~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ... .....++.++.+|.++|||+||+|||+
T Consensus        87 ~~~-~~~~~~~~~~~~l~~~~kPvIAav~G~  116 (275)
T 3hin_A           87 EGL-VHSQTWHRVFDKIQYCRVPVIAALKGA  116 (275)
T ss_dssp             HHH-HHHHHHHHHHHHHHTCSSCEEEEECSE
T ss_pred             hHH-HHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence            221 222345678889999999999999995

>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}

Probab=99.90  E-value=2.1e-23  Score=169.39  Aligned_cols=105  Identities=24%  Similarity=0.331  Sum_probs=85.3

Q ss_pred             cccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCC-----
Q 030574           68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDG-----  142 (175)
Q Consensus        68 ~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~-----  142 (175)
                      +..+.++.. +++|++|+||||++ |+|+.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++....     
T Consensus         5 ~~~~~~~~~-~~~v~~itlnrP~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~   81 (263)
T 3l3s_A            5 QDGLLGEVL-SEGVLTLTLGRAPA-HPLSRAMIAALHDALRRAMGDDHVHVLVIHGPG-RIFCAGHDLKEIGRHRADPDE   81 (263)
T ss_dssp             ---CEEEEE-SSSEEEEEECSTTT-CCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCS-SEEECCSCSCCCCC-----CC
T ss_pred             ccceEEEEe-eCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCccCCcChHHHhhccccccc
Confidence            345666654 89999999999999 999999999999999999999999999999999 9999999999886532     


Q ss_pred             ccchhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          143 YADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ...........++.++.+|.++|||+||+|||+
T Consensus        82 ~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  114 (263)
T 3l3s_A           82 GRAFVTDLFEACSALMLDLAHCPKPTIALVEGI  114 (263)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHTCSSCEEEEESSE
T ss_pred             cHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence            111112223345778889999999999999995

>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}

Probab=99.90  E-value=1.7e-24  Score=175.16  Aligned_cols=106  Identities=27%  Similarity=0.399  Sum_probs=87.2

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccch
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADY  146 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~  146 (175)
                      .+..|.+++  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++........
T Consensus         4 ~~~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~   80 (256)
T 3qmj_A            4 SMVTLQIDD--DNRVRTLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSG-RGFSAGTDLAEMQARITDPN   80 (256)
T ss_dssp             --CCEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TEEECCBCHHHHHHHHHSSS
T ss_pred             CcceEEEEE--ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCcccCcCHHHHhhcccchh
Confidence            456788988  899999999999999999999999999999999999999999999999 99999999998754211111


Q ss_pred             hhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          147 ENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       147 ~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .......++.++.+|.++|||+||+|||+
T Consensus        81 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~  109 (256)
T 3qmj_A           81 FSEGKFGFRGLIKALAGFPKPLICAVNGL  109 (256)
T ss_dssp             CCCCSSHHHHHHHHHHHCCSCEEEEECSE
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence            01112234677889999999999999995

>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}

Probab=99.90  E-value=1.6e-23  Score=172.37  Aligned_cols=104  Identities=26%  Similarity=0.357  Sum_probs=82.5

Q ss_pred             ccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccch--
Q 030574           69 TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADY--  146 (175)
Q Consensus        69 ~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~--  146 (175)
                      ..|.++.  +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++........  
T Consensus        24 ~~v~~~~--~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G-~~F~aG~Dl~~~~~~~~~~~~~  100 (290)
T 3sll_A           24 FVLVDRP--RPEIALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAG-KGFCSGADQKSAGPIPHIGGLT  100 (290)
T ss_dssp             CEEEEEE--ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHTCTTCCEEEEEEST-TCSBCC------CCCSSCTTCC
T ss_pred             eEEEEEE--ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEECCC-CCeeCCcChHHHhccccccccc
Confidence            4577877  899999999999999999999999999999999999999999999999 99999999998765432211  


Q ss_pred             ----hhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          147 ----ENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       147 ----~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                          .......++.++.+|.++|||+||+|||+
T Consensus       101 ~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  133 (290)
T 3sll_A          101 QPTIALRSMELLDEVILTLRRMHQPVIAAINGA  133 (290)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSE
T ss_pred             chhHHHHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence                11222345778889999999999999995

>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*

Probab=99.90  E-value=1.5e-23  Score=168.98  Aligned_cols=102  Identities=24%  Similarity=0.314  Sum_probs=84.8

Q ss_pred             EEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEec-CCCCcccCCCCCCccccCCccchhhh
Q 030574           71 IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG-KGTEAFCSGGDQALRTRDGYADYENF  149 (175)
Q Consensus        71 v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG-~g~~~FcaG~Dl~~~~~~~~~~~~~~  149 (175)
                      |.++.  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+| .| ++||+|+|++++...........
T Consensus         2 v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~~g-~~F~aG~Dl~~~~~~~~~~~~~~   78 (250)
T 2a7k_A            2 VFEEN--SDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAE-RSFSAGGDFNEVKQLSRSEDIEE   78 (250)
T ss_dssp             EEEEE--ETTEEEEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTT-SCSBCBSCHHHHHTC-CHHHHHH
T ss_pred             eEEEe--eCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCC-CCccCCcCHHHHhhcCchhhHHH
Confidence            56676  7899999999999999999999999999999999999999999999 88 89999999998765322111011


Q ss_pred             hHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          150 GRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       150 ~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ....+++++.+|.++|||+||+|||+
T Consensus        79 ~~~~~~~~~~~i~~~~kPvIAav~G~  104 (250)
T 2a7k_A           79 WIDRVIDLYQAVLNVNKPTIAAVDGY  104 (250)
T ss_dssp             HHHHHHHHHHHHHTCCSCEEEEECSE
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEECCe
Confidence            22235677889999999999999995

>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}

Probab=99.90  E-value=3.2e-24  Score=174.68  Aligned_cols=106  Identities=21%  Similarity=0.321  Sum_probs=87.6

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc-c
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY-A  144 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~-~  144 (175)
                      |+++.|.++.  +++|++||||||+++|+||.+|+.+|.++++.++.| ++|+|||||.| ++||+|+|++++..... .
T Consensus         4 m~~~~i~~~~--~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~   79 (267)
T 3hp0_A            4 VTYQTIKVRF--QASVCYITFHRPEANNTINDTLIEECLQVLNQCETS-TVTVVVLEGLP-EVFCFGADFQEIYQEMKRG   79 (267)
T ss_dssp             -CCSSEEEEE--ETTEEEEEECCGGGTTCBCSHHHHHHHHHHHHHHHS-SCCEEEEECCS-SCSBCCBCHHHHHHTTTTT
T ss_pred             CCCceEEEEE--ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhcC-CCEEEEEECCC-CceecCcCHHHHHhcccCh
Confidence            5677899998  899999999999999999999999999999999986 69999999999 99999999998765321 1


Q ss_pred             chhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          145 DYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       145 ~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .........+++++.+|.++|||+||+|||+
T Consensus        80 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  110 (267)
T 3hp0_A           80 RKQASSQEPLYDLWMKLQTGPYVTISHVRGK  110 (267)
T ss_dssp             CCSCCCCHHHHHHHHHHHHSSSEEEEEECSE
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCEEEEECCE
Confidence            1111112235677889999999999999995

>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*

Probab=99.90  E-value=1.4e-23  Score=170.84  Aligned_cols=103  Identities=30%  Similarity=0.415  Sum_probs=86.3

Q ss_pred             cEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc---cch
Q 030574           70 DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY---ADY  146 (175)
Q Consensus        70 ~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~---~~~  146 (175)
                      .|.++.  +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++.....   ...
T Consensus         4 ~i~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~~~   80 (269)
T 1nzy_A            4 AIGHRV--EDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAE-DAFCAGFYLREIPLDKGVAGVRD   80 (269)
T ss_dssp             SEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TCSBCCBCGGGSCSSSHHHHHHH
T ss_pred             eEEEEE--ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCC-CCcccCcCHHHHhhcccccChHH
Confidence            477887  799999999999999999999999999999999999999999999999 99999999998765320   111


Q ss_pred             h-hhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          147 E-NFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       147 ~-~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      . ......+++++.+|.++|||+||+|||+
T Consensus        81 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  110 (269)
T 1nzy_A           81 HFRIAALWWHQMIHKIIRVKRPVLAAINGV  110 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSSCEEEEECSE
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence            1 1122235677888999999999999995

>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*

Probab=99.90  E-value=1.2e-23  Score=170.54  Aligned_cols=104  Identities=22%  Similarity=0.355  Sum_probs=85.5

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEec-CCCCcccCCCCCCccccCCccc
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG-KGTEAFCSGGDQALRTRDGYAD  145 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG-~g~~~FcaG~Dl~~~~~~~~~~  145 (175)
                      .|+.|.++.  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+ +|+|||+| .|+++||+|+|++++.......
T Consensus         2 ~~~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~-vr~vVltg~~g~~~F~aG~Dl~~~~~~~~~~   78 (261)
T 1ef8_A            2 SYQYVNVVT--INKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPE-IRCIILRAPSGSKVFSAGHDIHELPSGGRDP   78 (261)
T ss_dssp             CCSSEEEEE--ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHTCSTT-CCEEEEECCTTCSEEECCSCSTTC-----CT
T ss_pred             CcceEEEEE--eCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCC-ceEEEEECCCCCCeeecCcChHhhhccCchh
Confidence            456789988  7999999999999999999999999999999999999 99999999 8768999999999875432111


Q ss_pred             hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      . .. ...+++++.+|.++|||+||+|||+
T Consensus        79 ~-~~-~~~~~~~~~~l~~~~kPvIAav~G~  106 (261)
T 1ef8_A           79 L-SY-DDPLRQITRMIQKFPKPIISMVEGS  106 (261)
T ss_dssp             T-CT-TSHHHHHHHHHHHCSSCEEEEECSE
T ss_pred             H-HH-HHHHHHHHHHHHhCCCCEEEEECCE
Confidence            1 11 1224677888999999999999995

>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}

Probab=99.90  E-value=4.4e-24  Score=173.48  Aligned_cols=105  Identities=27%  Similarity=0.324  Sum_probs=89.0

Q ss_pred             CCCcccEEEEEEeCCC-EEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc
Q 030574           65 GTEFTDIIYEKAVGEG-IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY  143 (175)
Q Consensus        65 ~~~~~~v~~e~~~~~~-V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~  143 (175)
                      +|.++.|.++.  +++ |++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.....
T Consensus         5 mm~~~~i~~~~--~~~gv~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~   81 (263)
T 3moy_A            5 MTTYTTIATSR--PVAGVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSE-RAFAAGADIAEMVTLTP   81 (263)
T ss_dssp             -CCCSSEEEEC--CSTTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCS-SEEEESBCHHHHTTCCH
T ss_pred             cCCCCeEEEEE--eCCeEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCeeCCcChHHHhccCc
Confidence            46677899988  666 999999999999999999999999999999999999999999987 99999999998765432


Q ss_pred             cchhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          144 ADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       144 ~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ..   .....++.++.++.++|||+||+|||+
T Consensus        82 ~~---~~~~~~~~~~~~l~~~~kPvIAav~G~  110 (263)
T 3moy_A           82 HQ---ARERNLLSGWDSLTQVRKPIVAAVAGY  110 (263)
T ss_dssp             HH---HHHTTTTHHHHHHTTCCSCEEEEECBE
T ss_pred             hh---HHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence            22   112234567888999999999999995

>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}

Probab=99.90  E-value=1.4e-23  Score=169.81  Aligned_cols=102  Identities=32%  Similarity=0.477  Sum_probs=82.2

Q ss_pred             ccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhh
Q 030574           69 TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYEN  148 (175)
Q Consensus        69 ~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~  148 (175)
                      +.|.++.  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.......  .
T Consensus         3 ~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~--~   77 (257)
T 2ej5_A            3 ETIRYEV--KGQVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAG-RAFCAGEDLSGVTEEMDHG--D   77 (257)
T ss_dssp             SSEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESS-SCSBCCBCC-------CHH--H
T ss_pred             CceEEEe--ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCC-CCccCCcCHHHHhhccchh--H
Confidence            4688887  799999999999999999999999999999999999999999999999 9999999999876432111  1


Q ss_pred             hhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          149 FGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       149 ~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .....+++++.+|.++|||+||+|||+
T Consensus        78 ~~~~~~~~~~~~l~~~~kPvIAav~G~  104 (257)
T 2ej5_A           78 VLRSRYAPMMKALHHLEKPVVAAVNGA  104 (257)
T ss_dssp             HHHHTHHHHHHHHHHCCSCEEEEECSE
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEECcc
Confidence            111125677889999999999999995

>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A

Probab=99.90  E-value=1.3e-23  Score=171.88  Aligned_cols=108  Identities=18%  Similarity=0.126  Sum_probs=88.0

Q ss_pred             CCCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc-
Q 030574           65 GTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY-  143 (175)
Q Consensus        65 ~~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~-  143 (175)
                      .|.|+.|.++.  +++|++||||||+++|+||.+|+.+|.++|+.++.|+++|+|||||.| ++||+|+|++++..... 
T Consensus         5 ~m~~~~i~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~~~   81 (280)
T 1pjh_A            5 IRQNEKISYRI--EGPFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSG-RFFSSGADFKGIAKAQGD   81 (280)
T ss_dssp             CCCBTTEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBT-TBSBCCBCHHHHHC----
T ss_pred             cccCCceEEEE--ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCccCCcCHHHHhhcccc
Confidence            36677899988  799999999999999999999999999999999999999999999999 99999999997643211 


Q ss_pred             c-----ch-hhhhH---hhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          144 A-----DY-ENFGR---LNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       144 ~-----~~-~~~~~---~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .     .. .....   ..++.++.+|.++|||+||+|||+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  122 (280)
T 1pjh_A           82 DTNKYPSETSKWVSNFVARNVYVTDAFIKHSKVLICCLNGP  122 (280)
T ss_dssp             ---CCSSHHHHHHHHTHHHHHHHHHHHHHCCSEEEEEECSC
T ss_pred             cccchhhhHHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence            0     10 01111   123567788999999999999996

>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A

Probab=99.90  E-value=1.8e-23  Score=169.44  Aligned_cols=104  Identities=25%  Similarity=0.363  Sum_probs=87.2

Q ss_pred             cccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchh
Q 030574           68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYE  147 (175)
Q Consensus        68 ~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~  147 (175)
                      ++.|.+++  +++|++|+||||++.|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.........
T Consensus        15 ~~~i~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~   91 (257)
T 1szo_A           15 YENIRLER--DGGVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTG-PSFCNEIDFTSFNLGTPHDWD   91 (257)
T ss_dssp             CTTEEEEE--ETTEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBT-TBSBCEECGGGSCCSSHHHHH
T ss_pred             CceEEEEE--ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCC-CccccCcCchhhhcCCHHHHH
Confidence            45688988  789999999999999999999999999999999999999999999999 899999999987532111111


Q ss_pred             hhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          148 NFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       148 ~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      . ....+++++.+|.++|||+||+|||+
T Consensus        92 ~-~~~~~~~~~~~l~~~~kPvIAav~G~  118 (257)
T 1szo_A           92 E-IIFEGQRLLNNLLSIEVPVIAAVNGP  118 (257)
T ss_dssp             H-HHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred             H-HHHHHHHHHHHHHcCCCcEEEEECCc
Confidence            1 11224677888999999999999996

>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}

Probab=99.90  E-value=7.3e-24  Score=174.23  Aligned_cols=107  Identities=20%  Similarity=0.252  Sum_probs=87.7

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccc
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYAD  145 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~  145 (175)
                      .+++.|.+++  +++|++||||||+ +|+||.+|+.+|.++++.++.|+++|+|||||.|+++||+|+|++++.......
T Consensus         6 ~~~~~i~~~~--~~~va~itlnrP~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~   82 (287)
T 3gkb_A            6 DAYSTLRVSS--EHGVARIILDNPP-VNVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMDALQ   82 (287)
T ss_dssp             -CCSSEEEEE--ETTEEEEEECCTT-TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCTTGGGSHHHHH
T ss_pred             CCCCeEEEEE--ECCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHcCCCeeEEEEecCCCCceeCCcCHHHHhhccccc
Confidence            3567899988  8999999999998 799999999999999999999999999999999878999999999876421100


Q ss_pred             ----hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 ----YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ----~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                          ........++.++.+|.++|||+||+|||+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~  116 (287)
T 3gkb_A           83 ELAASAPADVNVFQAVGELIRHQPQVTIVKLAGK  116 (287)
T ss_dssp             HHHHTSCTTCCTTHHHHHHHHHCSSEEEEEECSE
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence                000111234677889999999999999995

>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}

Probab=99.89  E-value=8.6e-24  Score=172.54  Aligned_cols=107  Identities=61%  Similarity=0.923  Sum_probs=84.0

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCC-cccCCCCCCccccCCcc
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE-AFCSGGDQALRTRDGYA  144 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~-~FcaG~Dl~~~~~~~~~  144 (175)
                      ..|+.|.++.  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| + +||+|+|++++......
T Consensus        10 ~~~~~i~~~~--~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~~FcaG~Dl~~~~~~~~~   86 (273)
T 2uzf_A           10 REYDEIKYEF--YEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEG-DLAFCSGGDQKKRGHGGYV   86 (273)
T ss_dssp             BCCSSEEEEE--ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESS-SEEEECCCCCC--------
T ss_pred             CCCceEEEEE--ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCC-CCceecCcCcHhhhccccc
Confidence            3466788988  789999999999999999999999999999999999999999999999 7 99999999987542111


Q ss_pred             chhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          145 DYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       145 ~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .........+++++.+|.++|||+||+|||+
T Consensus        87 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  117 (273)
T 2uzf_A           87 GEDQIPRLNVLDLQRLIRIIPKPVIAMVKGY  117 (273)
T ss_dssp             CCSSSCCCTHHHHHHHHHHSSSCEEEEECEE
T ss_pred             hhhhHHHhhHHHHHHHHHhCCCCEEEEECCE
Confidence            1111101124566778999999999999995

>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}

Probab=99.89  E-value=1.7e-23  Score=171.22  Aligned_cols=102  Identities=21%  Similarity=0.322  Sum_probs=88.2

Q ss_pred             ccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhh
Q 030574           69 TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYEN  148 (175)
Q Consensus        69 ~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~  148 (175)
                      +.|.+++  +++|++|+||||++ |+|+.+|+.+|.++|+.++.|+++|+|||+|.| ++||+|+|++++......... 
T Consensus        24 ~~v~~~~--~~~Va~ItlnrP~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~~~~~~-   98 (277)
T 4di1_A           24 EFVSVVA--DQGLATLVVSRPPT-NAMTRQVYREIVAAADELGRRDDIGAVVLFGGH-EIFSAGDDMPELRTLNAPEAD-   98 (277)
T ss_dssp             CSEEEEE--ETTEEEEEECCTTT-TCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCS-SCSBCCBCHHHHHTCCHHHHH-
T ss_pred             ceEEEEE--ECCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCC-CCEecCcCcccccccChHHHH-
Confidence            5688988  89999999999999 999999999999999999999999999999998 999999999988764332222 


Q ss_pred             hhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          149 FGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       149 ~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .....++.++.+|.++|||+||+|||+
T Consensus        99 ~~~~~~~~~~~~l~~~~kPvIAav~G~  125 (277)
T 4di1_A           99 TAARVRLEAIDAVAAIPKPTVAAVTGY  125 (277)
T ss_dssp             HHHHHHHHHHHHHHHCSSCEEEEECSE
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence            223345778889999999999999995

>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}

Probab=99.89  E-value=1.2e-23  Score=170.12  Aligned_cols=99  Identities=35%  Similarity=0.491  Sum_probs=85.3

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccch
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADY  146 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~  146 (175)
                      .++.|.++.  +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++..     .
T Consensus         4 ~~~~i~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~-----~   75 (255)
T 3p5m_A            4 SMNGISVEH--DGAVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAG-RAFCSGGDLTGGDT-----A   75 (255)
T ss_dssp             CBTTEEEEE--ETTEEEEEECCGGGTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESS-SCSBCEECC---CH-----H
T ss_pred             CCceEEEEE--ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCC-CCccCCCChhhhcc-----h
Confidence            455688988  899999999999999999999999999999999999999999999999 99999999998762     1


Q ss_pred             hhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          147 ENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       147 ~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                        .....++.++.+|.++|||+||+|||+
T Consensus        76 --~~~~~~~~~~~~l~~~~kPvIAav~G~  102 (255)
T 3p5m_A           76 --GAADAANRVVRAITSLPKPVIAGVHGA  102 (255)
T ss_dssp             --HHHHHHHHHHHHHHHCSSCEEEEECSE
T ss_pred             --HHHHHHHHHHHHHHhCCCCEEEEeCCe
Confidence              223345678889999999999999995

>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3

Probab=99.89  E-value=2.8e-23  Score=170.05  Aligned_cols=106  Identities=30%  Similarity=0.493  Sum_probs=85.5

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccc
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYAD  145 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~  145 (175)
                      +.++.|.++.  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++ +|||+|.| ++||+|+|++++.......
T Consensus        23 ~~~~~i~~~~--~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~v-~vVltg~g-~~FcaG~Dl~~~~~~~~~~   98 (280)
T 2f6q_A           23 MGFETLVVTS--EDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNG-DYYSSGNDLTNFTDIPPGG   98 (280)
T ss_dssp             EECSSEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEEST-TCSBCCBCC----CCCTTH
T ss_pred             CCCCeEEEEE--ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCE-EEEEeCCC-CCcccCCCHHHHhhcCcch
Confidence            4567899988  799999999999999999999999999999999999999 99999999 8999999999876532222


Q ss_pred             hhhh---hHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 YENF---GRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~---~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ....   ....+++++.+|.++|||+||+|||+
T Consensus        99 ~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  131 (280)
T 2f6q_A           99 VEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGP  131 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSCCSCEEEEECSC
T ss_pred             hhHHHHHHHHHHHHHHHHHHcCCCCEEEEECCe
Confidence            1111   11234677788999999999999996

>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*

Probab=99.89  E-value=1e-23  Score=172.61  Aligned_cols=105  Identities=28%  Similarity=0.414  Sum_probs=86.8

Q ss_pred             CCCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCcc
Q 030574           65 GTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYA  144 (175)
Q Consensus        65 ~~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~  144 (175)
                      .|.++.|.+++  +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++......
T Consensus        21 ~m~~~~v~~~~--~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~   97 (278)
T 3h81_A           21 SMTYETILVER--DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSA-KAFAAGADIKEMADLTFA   97 (278)
T ss_dssp             --CCSSEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCS-SEEECCBCSHHHHTCCHH
T ss_pred             CCCCCeEEEEE--ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCC-CCeecCcCHHHHhccChh
Confidence            35677899998  799999999999999999999999999999999999999999999988 999999999988654322


Q ss_pred             chhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          145 DYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       145 ~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .  ......+.. +.+|.++|||+||+|||+
T Consensus        98 ~--~~~~~~~~~-~~~l~~~~kPvIAav~G~  125 (278)
T 3h81_A           98 D--AFTADFFAT-WGKLAAVRTPTIAAVAGY  125 (278)
T ss_dssp             H--HHHHTTTGG-GHHHHTCCSCEEEEECBE
T ss_pred             h--HHHHHHHHH-HHHHHhCCCCEEEEECCe
Confidence            2  111111222 678999999999999995

>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}

Probab=99.89  E-value=7.4e-24  Score=175.02  Aligned_cols=106  Identities=32%  Similarity=0.459  Sum_probs=78.0

Q ss_pred             CcccEEEEEEeCC-CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCcccc---CC
Q 030574           67 EFTDIIYEKAVGE-GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR---DG  142 (175)
Q Consensus        67 ~~~~v~~e~~~~~-~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~---~~  142 (175)
                      .++.|.++.  ++ +|++|+||||+++|+|+.+|+.+|.++|+.++.|+++|+|||||.| ++||+|+|++++..   ..
T Consensus        27 ~~~~v~~~~--~~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G-~~FcaG~Dl~~~~~~~~~~  103 (298)
T 3qre_A           27 AQDAVLYEA--TPGGVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRG-RGFCAGAYLGSADAAAGYD  103 (298)
T ss_dssp             -CCSEEEEE--CTTSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TCSEECC------------
T ss_pred             CCCeEEEEE--eCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCcccCcCHHHHhhccccc
Confidence            456799988  77 9999999999999999999999999999999999999999999999 99999999998764   11


Q ss_pred             ccc----hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          143 YAD----YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       143 ~~~----~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ...    .........+.++.+|.++|||+||+|||+
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~  140 (298)
T 3qre_A          104 KTMAKAKDANLADLVGERPPHFVTMLRKPVIAAINGP  140 (298)
T ss_dssp             -----------------CCTTGGGGSSSCEEEEECSC
T ss_pred             cccccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCc
Confidence            110    111111123445667899999999999996

>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*

Probab=99.89  E-value=1.5e-23  Score=171.38  Aligned_cols=108  Identities=31%  Similarity=0.418  Sum_probs=85.8

Q ss_pred             CCCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCC--
Q 030574           65 GTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDG--  142 (175)
Q Consensus        65 ~~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~--  142 (175)
                      ...|+.|.++.  +++|++|+||||+++|+||.+|+.+|.++|+.++.|+++|+|||+|.| ++||+|+|++++....  
T Consensus         5 ~~~~~~i~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~~~   81 (276)
T 2j5i_A            5 EGRWKTVKVEI--EDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG-EAWTAGMDLKEYFREVDA   81 (276)
T ss_dssp             TTCCSSEEEEE--ETEEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTEEEEEEEEST-TCSBCCBCHHHHHHHHHH
T ss_pred             cCCCceEEEEE--eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCCcCCcChhhHhhcccc
Confidence            35667788988  799999999999999999999999999999999999999999999999 8999999998764211  


Q ss_pred             -ccchhhhhHhhHHHH-HHHHhcCCCcEEEEeeCC
Q 030574          143 -YADYENFGRLNVLDL-QVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       143 -~~~~~~~~~~~~~~~-~~~i~~~~kPvIAaV~G~  175 (175)
                       ..............+ +.+|.++|||+||+|||+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  116 (276)
T 2j5i_A           82 GPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGW  116 (276)
T ss_dssp             SCTTHHHHHHHHHHHHHTTTTTTCSSCEEEEECSC
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence             011011111112232 557889999999999996

>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}

Probab=99.89  E-value=3.3e-23  Score=168.50  Aligned_cols=100  Identities=31%  Similarity=0.488  Sum_probs=80.3

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccc
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYAD  145 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~  145 (175)
                      ..++.|.+++  +++|++|+||||+++|+||.+|+.+|.++++.+++| ++|+|||||.| ++||+|+|++...     .
T Consensus        18 ~~~~~i~~~~--~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~G-~~FcaG~Dl~~~~-----~   88 (264)
T 3he2_A           18 GPGSMIGITQ--AEAVLTIELQRPERRNALNSQLVEELTQAIRKAGDG-SARAIVLTGQG-TAFCAGADLSGDA-----F   88 (264)
T ss_dssp             ----CEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHCC----CCSEEEEEESS-SCSBCCBCCTTCT-----T
T ss_pred             CCCCeEEEEE--ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhC-CceEEEEECCC-CCccCCcCCccch-----h
Confidence            3456799988  899999999999999999999999999999999988 99999999999 8999999998311     1


Q ss_pred             hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ... ....+++++.+|.++|||+||+|||+
T Consensus        89 ~~~-~~~~~~~~~~~l~~~~kPvIAav~G~  117 (264)
T 3he2_A           89 AAD-YPDRLIELHKAMDASPMPVVGAINGP  117 (264)
T ss_dssp             GGG-HHHHHHHHHHHHHHCSSCEEEEECSC
T ss_pred             hHH-HHHHHHHHHHHHHhCCCCEEEEECCc
Confidence            111 22235677889999999999999996

>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A

Probab=99.89  E-value=1.7e-23  Score=169.34  Aligned_cols=103  Identities=27%  Similarity=0.368  Sum_probs=85.6

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccch
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADY  146 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~  146 (175)
                      ++..|.++.  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++...... .
T Consensus         3 ~~~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~-~   78 (258)
T 2pbp_A            3 EFVSIAARQ--EGAVGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRG-RAFAAGADIQEMAKDDPI-R   78 (258)
T ss_dssp             -CCSEEEEE--ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TEEECCCCHHHHHTCCHH-H
T ss_pred             CcceEEEEe--eCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCC-CCccCCcCHHHHhcccch-h
Confidence            355788888  799999999999999999999999999999999999999999999998 999999999987543211 1


Q ss_pred             hhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          147 ENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       147 ~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ... ...+ +++.+|.++|||+||+|||+
T Consensus        79 ~~~-~~~~-~~~~~l~~~~kPvIAav~G~  105 (258)
T 2pbp_A           79 LEW-LNQF-ADWDRLSIVKTPMIAAVNGL  105 (258)
T ss_dssp             HHH-HCTT-HHHHHHHTCCSCEEEEECSE
T ss_pred             HHH-HHHH-HHHHHHHhCCCCEEEEEcCE
Confidence            111 1122 56778999999999999995

>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}

Probab=99.89  E-value=5.6e-23  Score=166.10  Aligned_cols=100  Identities=22%  Similarity=0.332  Sum_probs=85.4

Q ss_pred             EEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhh
Q 030574           71 IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFG  150 (175)
Q Consensus        71 v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~  150 (175)
                      |.+++  +++|++|+||||+++|+||.+|+.+|.++++.+++ +++|+|||+|.| ++||+|+|++++.......... .
T Consensus         9 v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~-~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~~-~   83 (254)
T 3isa_A            9 LAIER--RPAAWTFTLSRPEKRNALSAELVEALIDGVDAAHR-EQVPLLVFAGAG-RNFSAGFDFTDYETQSEGDLLL-R   83 (254)
T ss_dssp             EEEEE--CSSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHH-TTCSEEEEEEST-TCSCCCBCCTTCTTSCHHHHHH-H
T ss_pred             EEEEE--ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEECCC-CceeeCcChHHhhccCchhHHH-H
Confidence            88888  89999999999999999999999999999999987 589999999999 9999999999986543322211 1


Q ss_pred             HhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          151 RLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       151 ~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ...++.++.+|.++|||+||+|||+
T Consensus        84 ~~~~~~~~~~l~~~~kPvIAav~G~  108 (254)
T 3isa_A           84 MVRIEMLLQRVAGSPSLTLALAHGR  108 (254)
T ss_dssp             HHHHHHHHHHHHTCSSEEEEEECSE
T ss_pred             HHHHHHHHHHHHhCCCCEEEEECCe
Confidence            1235677889999999999999995

>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}

Probab=99.89  E-value=2.1e-23  Score=170.62  Aligned_cols=104  Identities=27%  Similarity=0.364  Sum_probs=87.7

Q ss_pred             ccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCcc-chh
Q 030574           69 TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYA-DYE  147 (175)
Q Consensus        69 ~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~-~~~  147 (175)
                      +.|.+++  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++...... ...
T Consensus        28 ~~v~~~~--~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~~  104 (276)
T 3rrv_A           28 TEIDVRA--DGALRIITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAG-RAFSAGGDFGYLKELSADADLR  104 (276)
T ss_dssp             TTEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TCSBCCBCHHHHHHHHHCHHHH
T ss_pred             CeEEEEE--ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CcccCCcCHHHHhhcccchHHH
Confidence            3688888  899999999999999999999999999999999999999999999999 999999999987542111 111


Q ss_pred             hhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          148 NFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       148 ~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ......++.++.+|.++|||+||+|||+
T Consensus       105 ~~~~~~~~~~~~~l~~~~kPvIAav~G~  132 (276)
T 3rrv_A          105 AKTIRDGREIVLGMARCRIPVVAAVNGP  132 (276)
T ss_dssp             HHHHHHHHHHHHHHHHCSSCEEEEECSC
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEECce
Confidence            1122235678889999999999999996

>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}

Probab=99.89  E-value=3e-24  Score=173.86  Aligned_cols=107  Identities=20%  Similarity=0.199  Sum_probs=87.1

Q ss_pred             CCCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCcc
Q 030574           65 GTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYA  144 (175)
Q Consensus        65 ~~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~  144 (175)
                      .+.++.|.+++  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| +.||+|+|++++......
T Consensus         8 ~~~~~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~   84 (258)
T 3lao_A            8 NSGPGRVTREQ--RGHLFLIGLDRAGKRNAFDSAMLADLALAMGEYERSEESRCAVLFAHG-EHFTAGLDLMELAPKLAA   84 (258)
T ss_dssp             CCSSCCEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESS-SCSBCCBCHHHHGGGCBT
T ss_pred             CCCCCeEEEEE--ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCC-CCeecCcCHHHHhhccch
Confidence            34567799988  899999999999999999999999999999999999999999999999 789999999987653222


Q ss_pred             chhhhhHhhHHHHHHHH-hcCCCcEEEEeeCC
Q 030574          145 DYENFGRLNVLDLQVQI-RRLPKPVIAMVHLP  175 (175)
Q Consensus       145 ~~~~~~~~~~~~~~~~i-~~~~kPvIAaV~G~  175 (175)
                      ....+ ...+++++.++ .++|||+||+|||+
T Consensus        85 ~~~~~-~~~~~~~~~~l~~~~~kPvIAav~G~  115 (258)
T 3lao_A           85 SGFRY-PDGGVDPWGVVQPRRSKPLVVAVQGT  115 (258)
T ss_dssp             TBCCC-CTTCCCTTSCSSSCCCSCEEEEECSE
T ss_pred             hhHHH-HHHHHHHHHHHHHhCCCCEEEEECCE
Confidence            11111 11123345667 89999999999995

>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A

Probab=99.89  E-value=2.3e-23  Score=169.95  Aligned_cols=106  Identities=27%  Similarity=0.355  Sum_probs=86.0

Q ss_pred             cccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccC-C-c--
Q 030574           68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRD-G-Y--  143 (175)
Q Consensus        68 ~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~-~-~--  143 (175)
                      |+.|.+++. +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++... . .  
T Consensus         2 ~~~v~~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~~~~~~   79 (275)
T 1dci_A            2 YESIQVTSA-QKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAG-KMFTSGIDLMDMASDILQPPG   79 (275)
T ss_dssp             CSSEEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEEST-TCSBCCBCHHHHHHHHTSCCC
T ss_pred             CceEEEEEc-CCCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCccCCcChHHHhhccccccc
Confidence            456888874 578999999999999999999999999999999999999999999999 999999999876432 0 0  


Q ss_pred             cc-h---hh--hhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          144 AD-Y---EN--FGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       144 ~~-~---~~--~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .. .   ..  .....+++++.+|.++|||+||+|||+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  117 (275)
T 1dci_A           80 DDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGG  117 (275)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSE
T ss_pred             chhhhhhHHHHHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence            01 0   00  111234667788999999999999995

>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}

Probab=99.89  E-value=4.3e-23  Score=167.58  Aligned_cols=103  Identities=21%  Similarity=0.239  Sum_probs=86.8

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEec-CCCCcccCCCCCCccccCCccc
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTG-KGTEAFCSGGDQALRTRDGYAD  145 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG-~g~~~FcaG~Dl~~~~~~~~~~  145 (175)
                      .++.|.++.  +++|++|+|||| ++|+|+.+|+.+|.++++.++.|+++|+|||+| .| ++||+|+|++++.. ....
T Consensus         7 ~~~~i~~~~--~~~v~~itlnrp-~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g-~~F~aG~Dl~~~~~-~~~~   81 (265)
T 2ppy_A            7 KKQYLTVFK--EDGIAEIHLHIN-KSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVP-KFFSAGADINFLRS-ADPR   81 (265)
T ss_dssp             ECSSEEEEE--ETTEEEEEECSS-TTCCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECST-TEEECCBCHHHHTT-SCHH
T ss_pred             CCCeEEEEe--eCCEEEEEECCC-CCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEcCCC-CeeeeCcCHHHHhc-cchh
Confidence            456788888  799999999999 999999999999999999999999999999999 77 99999999998765 2211


Q ss_pred             hhhhhHhhH-HHHHHHHhcCCCcEEEEeeCC
Q 030574          146 YENFGRLNV-LDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~~~~~~-~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      . ......+ ++++.+|.++|||+||+|||+
T Consensus        82 ~-~~~~~~~~~~~~~~l~~~~kPvIAav~G~  111 (265)
T 2ppy_A           82 F-KTQFCLFCNETLDKIARSPQVYIACLEGH  111 (265)
T ss_dssp             H-HHHHHHHHHHHHHHHHHSSSEEEEEECSE
T ss_pred             H-HHHHHHHHHHHHHHHHcCCCCEEEEECCE
Confidence            1 1122235 677889999999999999995

>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0

Probab=99.89  E-value=5.3e-24  Score=173.10  Aligned_cols=103  Identities=31%  Similarity=0.371  Sum_probs=86.3

Q ss_pred             cccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchh
Q 030574           68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYE  147 (175)
Q Consensus        68 ~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~  147 (175)
                      ++.|.++.  +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++.........
T Consensus         6 ~~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~   82 (265)
T 3qxz_A            6 VTELHEEI--RDGVAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAP-PAFCSGAQISAAAETFAAPRN   82 (265)
T ss_dssp             CCEEEEEE--ETTEEEEEEECGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TEEECCBCSTTCTTCCCCCCS
T ss_pred             cceEEEEE--ECCEEEEEEcCCccCCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCC-CccccCcChHHHhhccchhHH
Confidence            56788888  799999999999999999999999999999999999999999999999 999999999987654222111


Q ss_pred             hhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          148 NFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       148 ~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .... . +.++.++.++|||+||+|||+
T Consensus        83 ~~~~-~-~~~~~~l~~~~kPvIAav~G~  108 (265)
T 3qxz_A           83 PDFS-A-SPVQPAAFELRTPVIAAVNGH  108 (265)
T ss_dssp             SCCC-S-CCSSSCGGGSSSCEEEEECSE
T ss_pred             HHHH-H-HHHHHHHHhCCCCEEEEECCE
Confidence            1111 1 345667899999999999995

>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0

Probab=99.89  E-value=6.2e-24  Score=173.33  Aligned_cols=103  Identities=35%  Similarity=0.512  Sum_probs=80.4

Q ss_pred             ccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc-----
Q 030574           69 TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY-----  143 (175)
Q Consensus        69 ~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~-----  143 (175)
                      +.|.++.  +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.....     
T Consensus        11 ~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~~   87 (274)
T 3tlf_A           11 DTIKYEV--DGHTATITLNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTG-RAFCSGADVKEIPEDGKVIYER   87 (274)
T ss_dssp             SSEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TEEECCBC--------------
T ss_pred             CceEEEE--ECCEEEEEECCccccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEeCCC-CCcccCcCHHHHhhcccccccc
Confidence            4688888  799999999999999999999999999999999999999999999999 99999999998765332     


Q ss_pred             --cchhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          144 --ADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       144 --~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                        ........ .++.++.+|.++|||+||+|||+
T Consensus        88 ~~~~~~~~~~-~~~~~~~~l~~~~kPvIAav~G~  120 (274)
T 3tlf_A           88 PYLSTYDQWE-APQEGTPPFRTMAKPVLTAVNGI  120 (274)
T ss_dssp             CTTCSGGGGS-CCCTTCCCTTSCCSCEEEEECSE
T ss_pred             chhhHHHHHH-HHHHHHHHHHhCCCCEEEEECCe
Confidence              11111111 23456677899999999999995

>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0

Probab=99.88  E-value=5.3e-23  Score=167.25  Aligned_cols=104  Identities=27%  Similarity=0.379  Sum_probs=81.7

Q ss_pred             ccEEEE----EEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCcccc-CCc
Q 030574           69 TDIIYE----KAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR-DGY  143 (175)
Q Consensus        69 ~~v~~e----~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~-~~~  143 (175)
                      ..+.++    .  +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.. ...
T Consensus         7 ~~v~~~~~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~   83 (267)
T 3oc7_A            7 ALVDYAGPAAT--GGPVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTG-GTFCAGADLSEAGSGGSP   83 (267)
T ss_dssp             SSEEEECHHHH--SSSEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECS-SEEECCBC----------
T ss_pred             cccCCCCccce--eCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CceeCCcCchhhhhccCc
Confidence            467777    6  899999999999999999999999999999999999999999999999 89999999998762 111


Q ss_pred             cchh---hhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          144 ADYE---NFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       144 ~~~~---~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ....   ......++.++.+|.++|||+||+|||+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  118 (267)
T 3oc7_A           84 SSAYDMAVERAREMAALMRAIVESRLPVIAAIDGH  118 (267)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSE
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHhCCCCEEEEEcCe
Confidence            1110   1123345778889999999999999995

>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A

Probab=99.88  E-value=1.7e-23  Score=169.50  Aligned_cols=98  Identities=27%  Similarity=0.465  Sum_probs=80.8

Q ss_pred             CCCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCcc
Q 030574           65 GTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYA  144 (175)
Q Consensus        65 ~~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~  144 (175)
                      +.+++.|.+++  +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++....  
T Consensus         5 m~~~~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vvltg~g-~~F~aG~Dl~~~~~~~--   79 (256)
T 3pe8_A            5 MADSPVLLVDT--TDRVRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGAD-PVFCAGLDLKELGDTT--   79 (256)
T ss_dssp             ---CCSEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEEST-TCSBCCBCTTTC------
T ss_pred             CCCCCcEEEEE--ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCC-CCccCCcCHHHHhhhH--
Confidence            34566799988  899999999999999999999999999999999999999999999999 8999999999876531  


Q ss_pred             chhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          145 DYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       145 ~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                              .+..+..++.+++||+||+|||+
T Consensus        80 --------~~~~~~~~l~~~~kPvIAav~G~  102 (256)
T 3pe8_A           80 --------ELPDISPKWPDMTKPVIGAINGA  102 (256)
T ss_dssp             -------------CCCCCCCSSCEEEEECSE
T ss_pred             --------HHHHHHHHHHhCCCCEEEEECCe
Confidence                    11223356789999999999995

>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}

Probab=99.88  E-value=4.6e-23  Score=167.50  Aligned_cols=103  Identities=27%  Similarity=0.435  Sum_probs=79.0

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccc
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYAD  145 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~  145 (175)
                      .+++.|.+++  +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++ ....  ..
T Consensus         6 ~~~~~v~~~~--~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~-~~~~--~~   79 (265)
T 3rsi_A            6 SAARELLVER--DGPVVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAG-SAYCVGGDLS-DGWM--VR   79 (265)
T ss_dssp             ---CCEEEEE--ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TCSEECC------------
T ss_pred             CCCCcEEEEE--ECCEEEEEEcCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCcccCcCCC-cccc--cc
Confidence            4567899988  799999999999999999999999999999999999999999999999 8999999998 2211  11


Q ss_pred             hhhhhHhhHHH-HHHHH-h--cCCCcEEEEeeCC
Q 030574          146 YENFGRLNVLD-LQVQI-R--RLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~~~~~~~~-~~~~i-~--~~~kPvIAaV~G~  175 (175)
                      .. ......+. ++.++ .  ++|||+||+|||+
T Consensus        80 ~~-~~~~~~~~~~~~~l~~~~~~~kPvIAav~G~  112 (265)
T 3rsi_A           80 DG-SAPPLDPATIGKGLLLSHTLTKPLIAAVNGA  112 (265)
T ss_dssp             ------CCCHHHHHHHTTSSCCCSSCEEEEECSC
T ss_pred             hH-HHHHHhHHHHHHHHHHhcCCCCCEEEEECCe
Confidence            11 11111245 67788 8  9999999999996

>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}

Probab=99.88  E-value=6.3e-23  Score=173.60  Aligned_cols=104  Identities=24%  Similarity=0.360  Sum_probs=85.9

Q ss_pred             ccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccC---Cccc
Q 030574           69 TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRD---GYAD  145 (175)
Q Consensus        69 ~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~---~~~~  145 (175)
                      ..|.++.  +++|++|+||||+++|+||.+|+.+|.++|+.++.|+++|+|||||.|+++||+|+|++++...   ....
T Consensus         6 ~~v~~~~--~~~v~~itLnrP~~~Nal~~~m~~~L~~al~~~~~d~~vr~vVltG~g~~~FcaG~Dl~~~~~~~~~~~~~   83 (363)
T 3bpt_A            6 EEVLLGK--KGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKI   83 (363)
T ss_dssp             CSEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEETTSSEEECCBCHHHHHHHHTSSCCC
T ss_pred             cceEEEE--ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCcccCCcCHHHHHhhcccccHH
Confidence            3588887  7999999999999999999999999999999999999999999999987899999999876431   1111


Q ss_pred             hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ...+. ...+.++.+|.++|||+||+|||+
T Consensus        84 ~~~~~-~~~~~~~~~l~~~~kPvIAav~G~  112 (363)
T 3bpt_A           84 APVFF-REEYMLNNAVGSCQKPYVALIHGI  112 (363)
T ss_dssp             HHHHH-HHHHHHHHHHHTCSSCEEEEECSE
T ss_pred             HHHHH-HHHHHHHHHHHhCCCCEEEEECCE
Confidence            11122 123567788999999999999995

>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A

Probab=99.88  E-value=1.8e-23  Score=169.82  Aligned_cols=102  Identities=27%  Similarity=0.369  Sum_probs=83.2

Q ss_pred             cccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchh
Q 030574           68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYE  147 (175)
Q Consensus        68 ~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~  147 (175)
                      ++.|.+++  +++|++|+||||+++|+||.+|+.+|.++++.+++|+++|+|||||.| ++||+|+|++++.........
T Consensus        10 m~~v~~~~--~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~   86 (262)
T 3r9q_A           10 QPAVRVEK--AGPVTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDN-GTFCAGADLKAMGTDRGNELH   86 (262)
T ss_dssp             CCSEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TCSBCCBCTTTTTSTTSCCCC
T ss_pred             CCEEEEEE--ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCccCCcCHHHHhccChhhHH
Confidence            34688988  799999999999999999999999999999999999999999999999 899999999988653322111


Q ss_pred             hhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          148 NFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       148 ~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .   .....+...+.++|||+||+|||+
T Consensus        87 ~---~~~~~~~~~~~~~~kPvIAav~G~  111 (262)
T 3r9q_A           87 P---HGPGPMGPSRLRLSKPVIAAISGH  111 (262)
T ss_dssp             T---TSSCTTSSTTCCCSSCEEEEECSE
T ss_pred             H---hhhhHHHHHHHhCCCCEEEEECCe
Confidence            0   001122334668999999999995

>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*

Probab=99.88  E-value=1.1e-22  Score=162.56  Aligned_cols=101  Identities=21%  Similarity=0.294  Sum_probs=83.5

Q ss_pred             ccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhh
Q 030574           69 TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYEN  148 (175)
Q Consensus        69 ~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~  148 (175)
                      +.|.++.  +++|++|+||||+ +|+|+.+|+.+|.++++.+++| ++|+|||||.| ++||+|+|++++......... 
T Consensus         5 ~~v~~~~--~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d-~vr~vvltg~g-~~F~aG~Dl~~~~~~~~~~~~-   78 (233)
T 3r6h_A            5 GPVTYTH--DDAIGVIRMDDGK-VNVLGPTMQQALNEAIDAADRD-NVGALVIAGNH-RVFSGGFDLKVLTSGEAKPAI-   78 (233)
T ss_dssp             CCEEEEE--ETTEEEEEECCSS-SCCCSHHHHHHHHHHHHHHHHH-TCSEEEEECCS-SEEECCSCHHHHC---CHHHH-
T ss_pred             CceEEEE--ECCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHhC-CCeEEEEECCC-CCccCCcChHHHhccChHHHH-
Confidence            3588888  7999999999985 6999999999999999999987 59999999999 999999999988754222222 


Q ss_pred             hhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          149 FGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       149 ~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .....+++++.+|.++|||+||+|||+
T Consensus        79 ~~~~~~~~~~~~l~~~~kPvIAav~G~  105 (233)
T 3r6h_A           79 DMLRGGFELSYRLLSYPKPVVIACTGH  105 (233)
T ss_dssp             HHHHHHHHHHHHHHTCSSCEEEEECSE
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEECCc
Confidence            222345678889999999999999995

>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}

Probab=99.88  E-value=3.7e-24  Score=173.99  Aligned_cols=106  Identities=24%  Similarity=0.326  Sum_probs=84.4

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccc
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYAD  145 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~  145 (175)
                      .+++.|.+++  +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.| +.||+|+|++++.......
T Consensus         6 ~~~~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~   82 (265)
T 3swx_A            6 SDYETLRIRR--DGYVLVIGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEG-PLFTAGLDLASVAAEIQGG   82 (265)
T ss_dssp             -CCSSEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TCSBCCBCHHHHHHHHC--
T ss_pred             CCCceEEEEE--ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCC-CCcccCcChHHHhhcccch
Confidence            3567899988  899999999999999999999999999999999999999999999999 7899999999875421111


Q ss_pred             hhhhhHhhHHHHHHHH-hcCCCcEEEEeeCC
Q 030574          146 YENFGRLNVLDLQVQI-RRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~~~~~~~~~~~~i-~~~~kPvIAaV~G~  175 (175)
                      .... ...+.+.+.++ .++|||+||+|||+
T Consensus        83 ~~~~-~~~~~~~~~~l~~~~~kPvIAav~G~  112 (265)
T 3swx_A           83 ASLT-PEGGINPWQVDGRQLSKPLLVAVHGK  112 (265)
T ss_dssp             CCCC-CTTCCCTTCCSSCCCSSCEEEEECSE
T ss_pred             hHHH-HHHHHHHHHHHHHhCCCCEEEEEcCe
Confidence            0000 01112334567 89999999999995

>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}

Probab=99.88  E-value=2.4e-23  Score=178.53  Aligned_cols=107  Identities=21%  Similarity=0.297  Sum_probs=88.9

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc---
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY---  143 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~---  143 (175)
                      .++.|.++.  +++|++||||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.|+++||+|+|++++.....   
T Consensus        40 ~~~~v~~~~--~~~V~~ItLnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltG~G~~~FcaG~Dl~~~~~~~~~~~  117 (407)
T 3ju1_A           40 VFQTLATAS--GKLVGVVTLNVEKALNALDLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAK  117 (407)
T ss_dssp             EEEEEECTT--SCEEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEESSSSEEECCBCCHHHHHHHHHHT
T ss_pred             ccceEEEEE--ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCcccCCCChhhhhhcccccc
Confidence            466788877  899999999999999999999999999999999999999999999999779999999998754211   


Q ss_pred             ---cchhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          144 ---ADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       144 ---~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                         ......+....+.++.+|.++|||+||+|||+
T Consensus       118 ~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAaVnG~  152 (407)
T 3ju1_A          118 GQVTEVAKVFFEEEYRLDYLLHTYGKPVLVWGDGI  152 (407)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHTCSSCEEEECCSE
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCc
Confidence               11111122234677889999999999999995

>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A

Probab=99.88  E-value=2e-23  Score=169.85  Aligned_cols=107  Identities=27%  Similarity=0.354  Sum_probs=82.6

Q ss_pred             CCCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCcc
Q 030574           65 GTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYA  144 (175)
Q Consensus        65 ~~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~  144 (175)
                      +..++.|.+++  +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|+++||+|+|++++......
T Consensus         5 m~~~~~v~~~~--~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~   82 (267)
T 3r9t_A            5 MTDAPGALAER--RGNVMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENL   82 (267)
T ss_dssp             ---CCSEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCHHHHHTTCCC
T ss_pred             CCCCCcEEEEE--ECCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceeCCcChHHHhcccch
Confidence            34567799988  8999999999999999999999999999999999999999999999996699999999987643222


Q ss_pred             chhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          145 DYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       145 ~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ........ ....+ .+.++|||+||+|||+
T Consensus        83 ~~~~~~~~-~~~~~-~~~~~~kPvIAav~G~  111 (267)
T 3r9t_A           83 YHPDHPEW-GFAGY-VRHFIDKPTIAAVNGT  111 (267)
T ss_dssp             SCTTCGGG-CGGGT-TTCCCSSCEEEEECSE
T ss_pred             hhHHHHhH-HHHHH-HHHhCCCCEEEEECCE
Confidence            11110000 00111 2348999999999995

>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A

Probab=99.88  E-value=1.9e-23  Score=170.40  Aligned_cols=106  Identities=24%  Similarity=0.413  Sum_probs=87.7

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCcc-c
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYA-D  145 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~-~  145 (175)
                      +++.|.++++ +++|++|+||||+ +|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++...... .
T Consensus        11 ~~~~v~~~~~-~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~   87 (272)
T 3qk8_A           11 DFPSLRFEPG-EHGVLNLVLDSPG-LNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEG-KAFSSGGSFELIDETIGDYE   87 (272)
T ss_dssp             GCTTEEEEEC-STTEEEEEECCHH-HHEECHHHHHHHHHHHHHHHHCTTCSEEEEEESS-SCSBCEECHHHHHHHHHCHH
T ss_pred             CCCeEEEEEe-CCCEEEEEECCCC-cCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCC-CCeeCCcCHHHHhccccchH
Confidence            4567999883 3489999999999 9999999999999999999999999999999999 999999999987542111 1


Q ss_pred             hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ........+++++.+|.++|||+||+|||+
T Consensus        88 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  117 (272)
T 3qk8_A           88 GRIRIMREARDLVLNLVNLDKPVVSAIRGP  117 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCSCEEEEECSE
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence            111122235678889999999999999995

>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A

Probab=99.88  E-value=4.2e-23  Score=168.33  Aligned_cols=107  Identities=22%  Similarity=0.320  Sum_probs=86.4

Q ss_pred             cccEEEEE--EeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccc
Q 030574           68 FTDIIYEK--AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYAD  145 (175)
Q Consensus        68 ~~~v~~e~--~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~  145 (175)
                      ...+.++.  ..+++|++|+||||+++|+|+.+|+.+|.++++.++.|+++++|||+|.|+++||+|+|++++.......
T Consensus         7 ~~~~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~   86 (272)
T 1hzd_A            7 EDELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSE   86 (272)
T ss_dssp             CCSEEEEECCGGGTTEEEEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCHHH
T ss_pred             CCcEEEEecccccCCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCCCcCCCChhhhhccChHH
Confidence            34455543  1268899999999999999999999999999999999999999999999867999999999875432211


Q ss_pred             hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ... +...+++++.+|.++|||+||+|||+
T Consensus        87 ~~~-~~~~~~~~~~~l~~~~kPvIAav~G~  115 (272)
T 1hzd_A           87 VGP-FVSKIRAVINDIANLPVPTIAAIDGL  115 (272)
T ss_dssp             HHH-HHHHHHHHHHHHHTCSSCEEEEESEE
T ss_pred             HHH-HHHHHHHHHHHHHhCCCCEEEEeCce
Confidence            111 22235677889999999999999995

>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}

Probab=99.88  E-value=1e-22  Score=167.55  Aligned_cols=107  Identities=17%  Similarity=0.203  Sum_probs=87.5

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccc
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYAD  145 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~  145 (175)
                      ++++.|.+++  +++|++|+||||+ +|+||.+|+.+|.++++.++.|+++|+|||||.|+++||+|+|++++.......
T Consensus         5 ~~~~~v~~~~--~~~Va~itlnrP~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~ff~~G~Dl~~~~~~~~~~   81 (289)
T 3h0u_A            5 ASYETIKARL--DGTVLSATFNAPP-MNLIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTAEA   81 (289)
T ss_dssp             CCCSSEEEEE--ETTEEEEEECCTT-TCCBCHHHHHHHHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHHHHH
T ss_pred             CCCCeEEEEE--ECCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCceeCCcCHHHHhhcCcch
Confidence            5677899998  7999999999998 799999999999999999999999999999999955566777999876421111


Q ss_pred             hhh--hhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 YEN--FGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~--~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ...  .....+++++.+|.++|||+||+|||+
T Consensus        82 ~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~  113 (289)
T 3h0u_A           82 AKAGGPGDASLGMLFRKLSQLPAVTIAKLRGR  113 (289)
T ss_dssp             HTTSSTTCCSHHHHHHHHHTCSSEEEEEECSE
T ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence            100  112235778889999999999999995

>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3

Probab=99.88  E-value=2e-22  Score=165.91  Aligned_cols=107  Identities=22%  Similarity=0.420  Sum_probs=86.1

Q ss_pred             CCCcccEEEEEEeCCCEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc
Q 030574           65 GTEFTDIIYEKAVGEGIAKITIN-RPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY  143 (175)
Q Consensus        65 ~~~~~~v~~e~~~~~~V~~ItLn-rp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~  143 (175)
                      ...|+.|.++.  +++|++|+|| ||+++|+|+.+|+.+|.++|+.++.|+. |+|||||.| ++||+|+|++++.....
T Consensus        19 ~~~~~~v~~~~--~~~v~~itln~rp~~~Nal~~~m~~~L~~al~~~~~d~~-r~vVltg~G-~~FcaG~Dl~~~~~~~~   94 (291)
T 2fbm_A           19 SSTYRDIVVKK--EDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDS-KLVLFSAAG-SVFCCGLDFGYFVKHLR   94 (291)
T ss_dssp             --CCSSEEEEE--CSSEEEEEECCSSSSTTCBCHHHHHHHHHHHHHHHHSSC-SEEEEEECS-SCSBCCBCHHHHHHHHH
T ss_pred             CCCcceEEEEE--eCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCC-eEEEEECCC-CCccCCcCHHHHHhccc
Confidence            35677899988  8999999999 7999999999999999999999998875 999999999 99999999998743111


Q ss_pred             ---cchhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          144 ---ADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       144 ---~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                         ..........+++++.+|.++|||+||+|||+
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~  129 (291)
T 2fbm_A           95 NNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGP  129 (291)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred             ccchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence               00111111234677788999999999999996

>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3

Probab=99.88  E-value=1.5e-22  Score=163.39  Aligned_cols=96  Identities=31%  Similarity=0.554  Sum_probs=80.5

Q ss_pred             CCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccC---CccchhhhhHhhH
Q 030574           78 GEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRD---GYADYENFGRLNV  154 (175)
Q Consensus        78 ~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~---~~~~~~~~~~~~~  154 (175)
                      +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++...   .......... .+
T Consensus         6 ~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~-~~   83 (253)
T 1uiy_A            6 KGHVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRG-KAFSAGADLAFLERVTELGAEENYRHSL-SL   83 (253)
T ss_dssp             CSSEEEEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESS-SCSBCCCCHHHHHHHTTSCHHHHHHHHH-HH
T ss_pred             eCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCcccCcChHHHHhcccCCchhHHHHHH-HH
Confidence            588999999999999999999999999999999999999999999999 999999999987542   1111111111 15


Q ss_pred             HHHHHHHhcCCCcEEEEeeCC
Q 030574          155 LDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       155 ~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ++++.+|.++|||+||+|||+
T Consensus        84 ~~~~~~i~~~~kPvIAav~G~  104 (253)
T 1uiy_A           84 MRLFHRVYTYPKPTVAAVNGP  104 (253)
T ss_dssp             HHHHHHHHHCSSCEEEEECSC
T ss_pred             HHHHHHHHhCCCCEEEEECCe
Confidence            677888999999999999996

>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3

Probab=99.87  E-value=9.8e-23  Score=165.48  Aligned_cols=104  Identities=22%  Similarity=0.336  Sum_probs=84.9

Q ss_pred             cccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccC-C-ccc
Q 030574           68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRD-G-YAD  145 (175)
Q Consensus        68 ~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~-~-~~~  145 (175)
                      ++.|.+++. +++|++|+||||+ +|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++ +... . ...
T Consensus         9 ~~~v~~~~~-~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~-~~~~~~~~~~   84 (264)
T 1wz8_A            9 YPGLAFAWP-RPGVLEITFRGEK-LNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEG-GVFSAGGSFG-LIEEMRASHE   84 (264)
T ss_dssp             CTTEEEEEE-ETTEEEEEECCSG-GGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGG-GCCBCCBCHH-HHHHHHHCHH
T ss_pred             CCeEEEEEc-cCCEEEEEeCCCC-cCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCC-CCCcccCccc-cccccccchH
Confidence            456888763 5889999999999 9999999999999999999999999999999999 8999999998 6432 1 101


Q ss_pred             hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ........+++++.+|.++|||+||+|||+
T Consensus        85 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  114 (264)
T 1wz8_A           85 ALLRVFWEARDLVLGPLNFPRPVVAAVEKV  114 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSSCEEEEECSE
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCEEEEECCe
Confidence            111122235677889999999999999995

>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A

Probab=99.87  E-value=1.6e-22  Score=163.95  Aligned_cols=105  Identities=22%  Similarity=0.394  Sum_probs=85.3

Q ss_pred             CcccEEEEEEeCCCEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc--
Q 030574           67 EFTDIIYEKAVGEGIAKITIN-RPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY--  143 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLn-rp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~--  143 (175)
                      .|+.|.++.  +++|++|+|| ||+++|+||.+|+.+|.++++.++.|+ +++|||+|.| ++||+|+|++++.....  
T Consensus         3 ~~~~i~~~~--~~~v~~itln~rp~~~Nal~~~~~~~L~~al~~~~~d~-~r~vvltg~g-~~F~aG~Dl~~~~~~~~~~   78 (261)
T 2gtr_A            3 RYRDIVVRK--QDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADD-SKLVLLSAVG-SVFCCGLDFIYFIRRLTDD   78 (261)
T ss_dssp             CCSSEEEEE--ETTEEEEEECCSSSSTTEECHHHHHHHHHHHHHHHHSS-CSCEEEEESS-SCSBCEECHHHHHHHHHHC
T ss_pred             ccceEEEEE--eCCEEEEEECCCCccCCCCCHHHHHHHHHHHHHHhcCC-CEEEEEecCC-CccccccCchhhhhccccc
Confidence            456788988  7999999999 699999999999999999999999887 4999999999 89999999998743111  


Q ss_pred             -cchhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          144 -ADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       144 -~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                       ..........+++++.++.++|||+||+|||+
T Consensus        79 ~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  111 (261)
T 2gtr_A           79 RKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGP  111 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred             hhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence             01111112235677888999999999999996

>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}

Probab=99.87  E-value=4e-23  Score=168.90  Aligned_cols=105  Identities=30%  Similarity=0.383  Sum_probs=73.1

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccch
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADY  146 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~  146 (175)
                      ....|.++.  +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++........
T Consensus        18 ~~~~v~~~~--~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~   94 (278)
T 4f47_A           18 SGPDALVEQ--RGHTLIVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAG-GYFCAGMDLKAATKKPPGDS   94 (278)
T ss_dssp             -CCSEEEEE--ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TCCC----------------
T ss_pred             CCCceEEEE--ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCC-CcccCCcChHhhhccchhhh
Confidence            345688988  899999999999999999999999999999999999999999999999 89999999998765432211


Q ss_pred             hhhhHhhHHHHHHHHh---cCCCcEEEEeeCC
Q 030574          147 ENFGRLNVLDLQVQIR---RLPKPVIAMVHLP  175 (175)
Q Consensus       147 ~~~~~~~~~~~~~~i~---~~~kPvIAaV~G~  175 (175)
                      ... ...+..++.++.   ++|||+||+|||+
T Consensus        95 ~~~-~~~~~~~~~~l~~~~~~~kPvIAav~G~  125 (278)
T 4f47_A           95 FKD-GSYDPSRIDALLKGRRLKKPLIAAVEGP  125 (278)
T ss_dssp             -------CTTCBTTTTBSCCCSSCEEEEECSE
T ss_pred             HHH-HHHHHHHHHHHHHhcCCCCCEEEEECCE
Confidence            100 001123344556   9999999999995

>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A

Probab=99.87  E-value=3e-22  Score=162.30  Aligned_cols=102  Identities=19%  Similarity=0.246  Sum_probs=83.6

Q ss_pred             cEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhh
Q 030574           70 DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENF  149 (175)
Q Consensus        70 ~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~  149 (175)
                      .+.++.  +++|++|+||||+ +|+|+.+|+.+|.++++.++.|+++|+|||+|.|+++||+|+|++++.......... 
T Consensus         6 ~v~~~~--~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~-   81 (260)
T 1sg4_A            6 LVEPDA--GAGVAVMKFKNPP-VNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPAHYAG-   81 (260)
T ss_dssp             EEEEET--TTTEEEEEECCTT-TTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCCHHHHHH-
T ss_pred             EEEEEe--cCCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCceEcCcCHHHHhccCHHHHHH-
Confidence            355554  8999999999996 699999999999999999999999999999999448999999999876432211111 


Q ss_pred             hHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          150 GRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       150 ~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ....+++++.+|.++|||+||+|||+
T Consensus        82 ~~~~~~~~~~~l~~~~kPvIAav~G~  107 (260)
T 1sg4_A           82 YWKAVQELWLRLYQSNLVLVSAINGA  107 (260)
T ss_dssp             HHHHHHHHHHHHHTCSSEEEEEECEE
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEECCe
Confidence            22235677889999999999999995

>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A

Probab=99.86  E-value=8.9e-23  Score=163.95  Aligned_cols=96  Identities=31%  Similarity=0.472  Sum_probs=80.3

Q ss_pred             EEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhh
Q 030574           71 IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFG  150 (175)
Q Consensus        71 v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~  150 (175)
                      ..++.  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++........    
T Consensus         5 ~~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~----   77 (243)
T 2q35_A            5 QLTEL--GNGVVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYG-NYFSSGASKEFLIRKTRGEV----   77 (243)
T ss_dssp             EEEEE--ETTEEEEEECCGGGTSBSCHHHHHHHHHHHHHHHHCTTCCEEEEECBT-TEEECBSCHHHHHHHHTTCC----
T ss_pred             EEEEe--eCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCeeCCCChHHHhhccchhh----
Confidence            34555  789999999999999999999999999999999999999999999999 99999999987643111000    


Q ss_pred             HhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          151 RLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       151 ~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                        ..++++.+|.++|||+||+|||+
T Consensus        78 --~~~~~~~~l~~~~kPvIAav~G~  100 (243)
T 2q35_A           78 --EVLDLSGLILDCEIPIIAAMQGH  100 (243)
T ss_dssp             --CCCCCHHHHHTCCSCEEEEECSE
T ss_pred             --HHHHHHHHHHhCCCCEEEEEcCc
Confidence              11345678899999999999995

>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}

Probab=99.86  E-value=6.6e-22  Score=157.88  Aligned_cols=99  Identities=21%  Similarity=0.260  Sum_probs=82.7

Q ss_pred             ccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhh
Q 030574           69 TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYEN  148 (175)
Q Consensus        69 ~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~  148 (175)
                      +.|.++.  +++|++||||||+ +|+|+.+|+.+|.++++.++.|  +++|||||.| ++||+|+|++++... .... .
T Consensus         6 ~~v~~~~--~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d--~~~vvltg~g-~~F~aG~Dl~~~~~~-~~~~-~   77 (232)
T 3ot6_A            6 DLVSYHL--DDGVATLTLNNGK-VNAISPDVIIAFNAALDQAEKD--RAIVIVTGQP-GILSGGYDLKVMTSS-AEAA-I   77 (232)
T ss_dssp             HHEEEEE--ETTEEEEEECCTT-TTCBCHHHHHHHHHHHHHHHHT--TCEEEEECBT-EEEECCBCHHHHHHC-HHHH-H
T ss_pred             cceEEEE--ECCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHhcC--CCEEEEECCC-CCccCCcCHHHHhhC-hHHH-H
Confidence            3588888  8999999999985 6999999999999999999977  4999999999 999999999987652 1111 1


Q ss_pred             hhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          149 FGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       149 ~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .....+++++.+|.++|||+||+|||+
T Consensus        78 ~~~~~~~~~~~~l~~~~kPvIAav~G~  104 (232)
T 3ot6_A           78 NLVAQGSTLARRMLSHPFPIIVACPGH  104 (232)
T ss_dssp             HHHHHHHHHHHHHHTCSSCEEEECCEE
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEECCE
Confidence            222335678889999999999999995

>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}

Probab=99.85  E-value=2.5e-22  Score=163.21  Aligned_cols=101  Identities=30%  Similarity=0.413  Sum_probs=75.4

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccc
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYAD  145 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~  145 (175)
                      ..++.|.+++  +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++.......
T Consensus        12 ~~~~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~   88 (265)
T 3qxi_A           12 DTEPEVLVEQ--RDRILIITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAG-GSFCAGMDLKAFARGENVV   88 (265)
T ss_dssp             ---CCEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TCCCCSBC-------CCCE
T ss_pred             CCCCeEEEEE--ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCC-CCeeCCCChhhhhccchhh
Confidence            4567899988  799999999999999999999999999999999999999999999999 8999999999876533221


Q ss_pred             hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ...  . .+ . +..+.. +||+||+|||+
T Consensus        89 ~~~--~-~~-~-~~~~~~-~kPvIAav~G~  112 (265)
T 3qxi_A           89 VEG--R-GL-G-FTERPP-AKPLIAAVEGY  112 (265)
T ss_dssp             ETT--T-EE-T-TTTSCC-SSCEEEEECSE
T ss_pred             hhh--h-hh-h-HHHhhC-CCCEEEEECCc
Confidence            110  0 00 0 222344 99999999995

>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*

Probab=99.85  E-value=5.5e-22  Score=160.72  Aligned_cols=104  Identities=34%  Similarity=0.430  Sum_probs=81.7

Q ss_pred             cccEEEEEE-eCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccch
Q 030574           68 FTDIIYEKA-VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADY  146 (175)
Q Consensus        68 ~~~v~~e~~-~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~  146 (175)
                      |+.+.++.. ..++|++|+||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++....... 
T Consensus         3 ~~~~~~~~~v~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~-   80 (260)
T 1mj3_A            3 FQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGE-KAFAAGADIKEMQNRTFQD-   80 (260)
T ss_dssp             CSSEEEEEESGGGCEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCS-SEEECCBCHHHHTTCCHHH-
T ss_pred             cccceeecccCcCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCC-CCccCCcChHhhhcccchH-
Confidence            445666551 1578999999999999999999999999999999999999999999999 9999999998865422111 


Q ss_pred             hhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          147 ENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       147 ~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                       . ....+...+.++.++|||+||+|||+
T Consensus        81 -~-~~~~~~~~~~~l~~~~kPvIAav~G~  107 (260)
T 1mj3_A           81 -C-YSGKFLSHWDHITRIKKPVIAAVNGY  107 (260)
T ss_dssp             -H-HHC--CCGGGGGGGCSSCEEEEECSE
T ss_pred             -H-HHHHHHHHHHHHHhCCCCEEEEECCE
Confidence             1 11112223556889999999999995

>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}

Probab=99.85  E-value=3.5e-22  Score=161.69  Aligned_cols=97  Identities=29%  Similarity=0.362  Sum_probs=80.5

Q ss_pred             ccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhh
Q 030574           69 TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYEN  148 (175)
Q Consensus        69 ~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~  148 (175)
                      +.|.+++  +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++..........
T Consensus         7 ~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~~   83 (256)
T 3trr_A            7 DEVLIEQ--RDRVLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAG-GNFCAGMDLKAFVSGEAVLSER   83 (256)
T ss_dssp             CSEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEGG-GCCCCCBCHHHHHHTCCCEETT
T ss_pred             CceEEEE--ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCC-CceecCcCHHHhccccchhhhh
Confidence            4588888  899999999999999999999999999999999999999999999999 8999999999876432211111


Q ss_pred             hhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          149 FGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       149 ~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .+     . +..+ ++|||+||+|||+
T Consensus        84 ~~-----~-~~~~-~~~kPvIAav~G~  103 (256)
T 3trr_A           84 GL-----G-FTNV-PPRKPIIAAVEGF  103 (256)
T ss_dssp             EE-----T-TSSS-CCSSCEEEEECSB
T ss_pred             hh-----h-HHHh-cCCCCEEEEECCe
Confidence            01     1 1234 8999999999996

>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*

Probab=99.84  E-value=2e-21  Score=167.70  Aligned_cols=106  Identities=25%  Similarity=0.294  Sum_probs=82.3

Q ss_pred             cccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecC--------CCCcccCCCCCCccc
Q 030574           68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGK--------GTEAFCSGGDQALRT  139 (175)
Q Consensus        68 ~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~--------g~~~FcaG~Dl~~~~  139 (175)
                      ++.|.++.  +++|++|+||||+++|+||.+|+.+|.++|+.++.|+++|+|||||.        |+++||+|+||+++.
T Consensus       166 ~~~v~~e~--~~gVa~ItLNRP~k~NALs~~m~~eL~~al~~~~~D~~VRvVVLtG~~~~~p~~aG~~~FcAG~DL~~~~  243 (440)
T 2np9_A          166 MEAVHLER--RDGVARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKYLS  243 (440)
T ss_dssp             CSSEEEEE--ETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECBCCSTTTTTCBCCBCCBCHHHHH
T ss_pred             CceEEEEE--ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCccccccCCCccccCCcchhhhh
Confidence            45688888  79999999999999999999999999999999999999999999995        547999999999875


Q ss_pred             cCCccchhh---hhHhhHHHHHHHH------------hcCCCcEEEEeeCC
Q 030574          140 RDGYADYEN---FGRLNVLDLQVQI------------RRLPKPVIAMVHLP  175 (175)
Q Consensus       140 ~~~~~~~~~---~~~~~~~~~~~~i------------~~~~kPvIAaV~G~  175 (175)
                      .........   .....++.++..+            .+++|||||+|||+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~pkPvIAAVnG~  294 (440)
T 2np9_A          244 QGGISLVDFLMRRELGYIHKLVRGVLTNDDRPGWWHSPRIEKPWVAAVDGF  294 (440)
T ss_dssp             TTCCCTTTTHHHHHHTHHHHHHHCEECCSCSTTTTTCCEECCCEEEEECSE
T ss_pred             ccCcchhhhhhHHHHHHHHHHHHHHHhhcccchhhhhhcCCCCEEEEECCc
Confidence            432111110   0001123444433            47999999999995

>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A

Probab=99.83  E-value=6.6e-21  Score=157.79  Aligned_cols=109  Identities=13%  Similarity=0.010  Sum_probs=79.7

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCC----CCCCCHHHHHHHHHHHHHhhc-----CCCceEEEEecCCCCcccCCCCCC
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDR----RNAFRPHTVKELIRAFNDARD-----DSSVGVIILTGKGTEAFCSGGDQA  136 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~----~Nal~~~~~~eL~~al~~~~~-----d~~vkvvVltG~g~~~FcaG~Dl~  136 (175)
                      ..|+.+.+..+.+++|++|+||||++    +|+|+.+|+.+|.++|+.++.     |+++|+|||+|.| ++||+|+|++
T Consensus        27 ~~y~~i~v~~~~~~~V~~itLnrp~k~n~~rpal~~~m~~eL~~al~~~~~d~~~~d~~vr~vVltg~G-~~FcaG~Dl~  105 (305)
T 3m6n_A           27 NIGSTLRIIEEPQRDVYWIHMHADLAINPGRACFSTRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDS-DVFNLGGDLA  105 (305)
T ss_dssp             --CTTEEEEEETTTTEEEEEECTTC-----CCSBCHHHHHHHHHHHHHHHHHHHHHTCSSCEEEEEESS-SSSBCCBCHH
T ss_pred             cCCceEEEEEEEECCEEEEEECCccccCCCCCCCCHHHHHHHHHHHHHHHhcccccCCCeEEEEEECCC-CCeecCcCHH
Confidence            34666666544489999999999998    559999999999999999987     5899999999998 9999999999


Q ss_pred             ccccCCc---cchhhhhHhhHHHHHHHH---hcCCCcEEEEeeCC
Q 030574          137 LRTRDGY---ADYENFGRLNVLDLQVQI---RRLPKPVIAMVHLP  175 (175)
Q Consensus       137 ~~~~~~~---~~~~~~~~~~~~~~~~~i---~~~~kPvIAaV~G~  175 (175)
                      ++.....   ..........+...+..+   .++|||+||+|||+
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~kPvIAaV~G~  150 (305)
T 3m6n_A          106 LFCQLIREGDRARLLDYAQRCVRGVHAFHVGLGARAHSIALVQGN  150 (305)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHHHHHHHHHHTGGGTTCEEEEEECSC
T ss_pred             HHHhccccccHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECCE
Confidence            8754211   111111111223334444   46899999999996

>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*

Probab=99.82  E-value=3.8e-20  Score=168.72  Aligned_cols=89  Identities=26%  Similarity=0.375  Sum_probs=80.0

Q ss_pred             CCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHH
Q 030574           78 GEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDL  157 (175)
Q Consensus        78 ~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~  157 (175)
                      +|+|++||||||+ .|+|+.+|+.+|.+++++++.|+++|+|||||+| ++||+|+||+++.......       .+.++
T Consensus        28 ~~~Va~itlnrP~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aGaDl~~~~~~~~~~-------~~~~~   98 (742)
T 3zwc_A           28 PHSLAMIRLCNPP-VNAVSPTVIREVRNGLQKAGSDHTVKAIVICGAN-GNFCAGADIHGFSAFTPGL-------ALGSL   98 (742)
T ss_dssp             STTEEEEEECCTT-TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEEST-TCSBCCBCSSSCCSSCSCS-------HHHHH
T ss_pred             eCCEEEEEeCCCc-ccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCC-CccccCcChHhhhccChhH-------HHHHH
Confidence            8999999999997 6999999999999999999999999999999999 8999999999987644332       13567


Q ss_pred             HHHHhcCCCcEEEEeeCC
Q 030574          158 QVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       158 ~~~i~~~~kPvIAaV~G~  175 (175)
                      +.+|.+++||+||+|||+
T Consensus        99 ~~~i~~~~kPvIAai~G~  116 (742)
T 3zwc_A           99 VDEIQRYQKPVLAAIQGV  116 (742)
T ss_dssp             HHHHHHCSSCEEEEECSE
T ss_pred             HHHHHhCCCCEEEEECcc
Confidence            888999999999999995

>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}

Probab=99.82  E-value=1.1e-20  Score=165.52  Aligned_cols=105  Identities=19%  Similarity=0.170  Sum_probs=87.6

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCC----------CCCCCCHHHHHHHHHHHHHhhcC-CCceEEEEec-CCCCcccCCCC
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPD----------RRNAFRPHTVKELIRAFNDARDD-SSVGVIILTG-KGTEAFCSGGD  134 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~----------~~Nal~~~~~~eL~~al~~~~~d-~~vkvvVltG-~g~~~FcaG~D  134 (175)
                      .++.|.++.  +++|++|+||||+          ++|+|+.+|+.+|.++++.++.| +++|+|||+| .| +.||+|+|
T Consensus        19 ~~~~v~ve~--~ggVA~ITLNRPed~~l~~g~~~k~NALs~~ml~eL~~AL~~~~~D~~~VRaVVLTGa~G-~~FcAGaD   95 (556)
T 2w3p_A           19 QYKHWKLSF--NGPVATLGIDIAEDGGIRDGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVRTVVLTSLKD-RVFCSGAN   95 (556)
T ss_dssp             GCSSEEEEE--ETTEEEEEECCCTTCCSSSSCCCCTTEECHHHHHHHHHHHHHHHHHCTTCCEEEEEESSS-SEEECEEC
T ss_pred             cCceEEEEe--eCCEEEEEEecccccccccccCCCCCCCCHHHHHHHHHHHHHHHhCCCCceEEEEeCCCC-CcccCCcC
Confidence            455788887  7999999999998          89999999999999999999999 9999999999 77 99999999


Q ss_pred             CCccccCCccchhhhhHhhHHHHHHHH----hcCCCcEEEEeeCC
Q 030574          135 QALRTRDGYADYENFGRLNVLDLQVQI----RRLPKPVIAMVHLP  175 (175)
Q Consensus       135 l~~~~~~~~~~~~~~~~~~~~~~~~~i----~~~~kPvIAaV~G~  175 (175)
                      ++++.......... +...+++++.+|    .+++||+||+|||+
T Consensus        96 L~el~~~~~~~~~~-~~~~~~~l~~~L~~a~~~~pKPVIAAVnG~  139 (556)
T 2w3p_A           96 IFMLGLSTHAWKVN-FCKFTNETRNGLEDSSRHSGLKFLAAVNGA  139 (556)
T ss_dssp             HHHHHHSCHHHHHH-HHHHHHHHHHHHHHHHHHTSCEEEEEECSE
T ss_pred             HHHHhhcccHHHHH-HHHHHHHHHHHHHHHHhcCCCCEEEEECCe
Confidence            99876543221111 222346677788    99999999999995

>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*

Probab=99.79  E-value=2e-19  Score=163.64  Aligned_cols=105  Identities=22%  Similarity=0.277  Sum_probs=85.4

Q ss_pred             ccEEEEEEeCCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCc-cc-
Q 030574           69 TDIIYEKAVGEGIAKITINRPD-RRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY-AD-  145 (175)
Q Consensus        69 ~~v~~e~~~~~~V~~ItLnrp~-~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~-~~-  145 (175)
                      +.+.++.. +++|++||||||+ ++|+|+.+|+.+|.++++.++.|+++|+||||| |+++||+|+||+++..... .. 
T Consensus         6 ~~i~~~~~-~~~va~itlnrp~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~~   83 (715)
T 1wdk_A            6 KAITVTAL-ESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS-GKDVFIVGADITEFVENFKLPDA   83 (715)
T ss_dssp             SSEEEEEC-GGGEEEEEECCTTSSSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEE-SSSSSBBCCCHHHHHHHTTSCHH
T ss_pred             CeEEEEEe-eCCEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCeEeCCcCHHHHhhcccCCHH
Confidence            45788732 7899999999998 899999999999999999999999999999999 7349999999998754211 11 


Q ss_pred             hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ........+++++.+|.+++||+||+|||+
T Consensus        84 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  113 (715)
T 1wdk_A           84 ELIAGNLEANKIFSDFEDLNVPTVAAINGI  113 (715)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSSCEEEEECSC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence            111112235778889999999999999996

>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}

Probab=99.77  E-value=1.9e-19  Score=164.07  Aligned_cols=107  Identities=20%  Similarity=0.251  Sum_probs=78.2

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccc
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYAD  145 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~  145 (175)
                      +++..+.++.. +++|++|||||| ++|+|+.+|+.+|.++++.++.|+++|+||||| |+++||+|+||+++.......
T Consensus         4 ~~~~~i~~~~~-~~~va~itlnrp-~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~   80 (725)
T 2wtb_A            4 RTKGKTVMEVG-GDGVAVITLINP-PVNSLSFDVLYNLKSNYEEALSRNDVKAIVITG-AKGRFSGGFDISGFGEMQKGN   80 (725)
T ss_dssp             ---CEEEEEEC-TTSEEEEEEECT-TTTCCCHHHHHHHHHHHHHHTTCTTCCEEEEEE-SSSCCBCSSCC----------
T ss_pred             CcCCeEEEEEe-eCCEEEEEECCC-CCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCcccCCcCHHHHhcccchh
Confidence            45567888832 799999999999 899999999999999999999999999999999 734999999999875422110


Q ss_pred             h--hhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 Y--ENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~--~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .  .......+++++.+|.+++||+||+|||+
T Consensus        81 ~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~  112 (725)
T 2wtb_A           81 VKEPKAGYISIDIITDLLEAARKPSVAAIDGL  112 (725)
T ss_dssp             --CCSSSHHHHHCCCCCCCTSSSCEEEEECSE
T ss_pred             hhhHHHHHHHHHHHHHHHHhCcCcEEEEECCc
Confidence            0  00111224455667889999999999995

>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A

Probab=98.63  E-value=8.5e-09  Score=92.02  Aligned_cols=80  Identities=20%  Similarity=0.149  Sum_probs=66.2

Q ss_pred             CCCEEEEEEcCCCCCCC--CCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHH
Q 030574           78 GEGIAKITINRPDRRNA--FRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVL  155 (175)
Q Consensus        78 ~~~V~~ItLnrp~~~Na--l~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~  155 (175)
                      +++|++|+|++|.+.|+  ++..+.++|.++|+.++.|+++|+|||++.+     .|+|+...             ..+.
T Consensus       300 ~~~VavI~l~g~i~~n~~~~~~~~~~~l~~~L~~a~~d~~vkaVVL~i~s-----pGG~~~~~-------------~~i~  361 (593)
T 3bf0_A          300 GDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNS-----PGGSVTAS-------------EVIR  361 (593)
T ss_dssp             SCEEEEEEEEEEEESSSSCTTSEEHHHHHHHHHHHHHCTTEEEEEEEEEE-----EEECHHHH-------------HHHH
T ss_pred             CCCEEEEEEeeeecCCccccchhHHHHHHHHHHHHHhCCCCCEEEEEecC-----CCCCHHHH-------------HHHH
Confidence            67899999999988888  6888999999999999999999999999975     36666421             1234


Q ss_pred             HHHHHHhcCCCcEEEEeeCC
Q 030574          156 DLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       156 ~~~~~i~~~~kPvIAaV~G~  175 (175)
                      +.+.++..++|||||+|+|+
T Consensus       362 ~~i~~l~~~~kPVia~v~g~  381 (593)
T 3bf0_A          362 AELAAARAAGKPVVVSMGGM  381 (593)
T ss_dssp             HHHHHHHHTTCCEEEEEEEE
T ss_pred             HHHHHHHhCCCCEEEEECCC
Confidence            55667888999999999984

>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}

Probab=98.40  E-value=4.2e-07  Score=72.31  Aligned_cols=80  Identities=18%  Similarity=0.266  Sum_probs=56.5

Q ss_pred             CCCEEEEEEcCCCCCC-----CCCH--HHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhh
Q 030574           78 GEGIAKITINRPDRRN-----AFRP--HTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFG  150 (175)
Q Consensus        78 ~~~V~~ItLnrp~~~N-----al~~--~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~  150 (175)
                      +++|++|.++.+=..+     .++.  -.+.+|.++|+.++.|+++|+|||++.     |.|+|+...            
T Consensus         2 ~~~iavi~i~G~I~~~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~v~~ivL~~~-----s~Gg~~~~~------------   64 (240)
T 3rst_A            2 SSKIAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDKTVKGIVLKVN-----SPGGGVYES------------   64 (240)
T ss_dssp             CCEEEEEEEESCBCCC---------CCCCHHHHHHHHHHHHHCTTEEEEEEEEE-----ECCBCHHHH------------
T ss_pred             CCeEEEEEEEEEEcCCCCcCcccccCCcCHHHHHHHHHHHHhCCCcEEEEEEec-----CCCCCHHHH------------
Confidence            5778999998762211     1110  135789999999999999999999986     567776431            


Q ss_pred             HhhHHHHHHHHhc-CCCcEEEEeeCC
Q 030574          151 RLNVLDLQVQIRR-LPKPVIAMVHLP  175 (175)
Q Consensus       151 ~~~~~~~~~~i~~-~~kPvIAaV~G~  175 (175)
                       ..+.+.+.++.. ++||+||+|+|+
T Consensus        65 -~~i~~~l~~~~~~~~kPVia~v~g~   89 (240)
T 3rst_A           65 -AEIHKKLEEIKKETKKPIYVSMGSM   89 (240)
T ss_dssp             -HHHHHHHHHHHHHHCCCEEEEEEEE
T ss_pred             -HHHHHHHHHHHHhCCCeEEEEECCe
Confidence             123455666776 899999999984

>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A

Probab=97.97  E-value=2.1e-05  Score=62.35  Aligned_cols=71  Identities=20%  Similarity=0.237  Sum_probs=57.0

Q ss_pred             CCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHH
Q 030574           78 GEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDL  157 (175)
Q Consensus        78 ~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~  157 (175)
                      .+.|++|+|+.     +|+..+.++|.++|+.++++ ++++|||+..     |.|+++..                ...+
T Consensus         7 ~~~V~vI~i~g-----~I~~~~~~~l~~~l~~a~~~-~~~~Ivl~in-----spGG~v~~----------------~~~i   59 (230)
T 3viv_A            7 KNIVYVAQIKG-----QITSYTYDQFDRYITIAEQD-NAEAIIIELD-----TPGGRADA----------------MMNI   59 (230)
T ss_dssp             CCEEEEEEEES-----CBCHHHHHHHHHHHHHHHHT-TCSEEEEEEE-----BSCEEHHH----------------HHHH
T ss_pred             CCeEEEEEEeC-----EECHHHHHHHHHHHHHHhcC-CCCEEEEEEe-----CCCcCHHH----------------HHHH
Confidence            56788899984     79999999999999999864 6999999875     55665421                2355


Q ss_pred             HHHHhcCCCcEEEEe---eCC
Q 030574          158 QVQIRRLPKPVIAMV---HLP  175 (175)
Q Consensus       158 ~~~i~~~~kPvIAaV---~G~  175 (175)
                      +..|..++|||||+|   +|.
T Consensus        60 ~~~i~~~~~PVia~v~p~~G~   80 (230)
T 3viv_A           60 VQRIQQSKIPVIIYVYPPGAS   80 (230)
T ss_dssp             HHHHHTCSSCEEEEECSTTCE
T ss_pred             HHHHHhCCCCEEEEEecCCCE
Confidence            677889999999999   873

>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4

Probab=97.44  E-value=0.0002  Score=58.82  Aligned_cols=79  Identities=13%  Similarity=0.198  Sum_probs=57.9

Q ss_pred             EEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHHHHH
Q 030574           81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQ  160 (175)
Q Consensus        81 V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~  160 (175)
                      |.++..+..-..|+|+..+.+.+.++++.+..+ .+.+|+|++.|      |+|+.+...       .  ...+..+..+
T Consensus       120 V~v~a~d~~~~ggslg~~~~~Ki~r~~e~A~~~-~~PvI~l~~sG------Garlqeg~~-------~--l~~~~~i~~a  183 (304)
T 2f9y_B          120 VVAAAFEFAFMGGSMGSVVGARFVRAVEQALED-NCPLICFSASG------GARMQEALM-------S--LMQMAKTSAA  183 (304)
T ss_dssp             CBEEEECTTSTTTCBCTHHHHHHHHHHHHHHHH-TCCEEEEEEES------SBCGGGTHH-------H--HHHHHHHHHH
T ss_pred             EEEEEEcCccccCCCCHHHHHHHHHHHHHHHhC-CCCEEEEECCC------CcCHHHHHH-------H--HHHHHHHHHH
Confidence            444455544457999999999999999999988 89999999876      777754321       1  1223455556


Q ss_pred             Hhc---CCCcEEEEeeCC
Q 030574          161 IRR---LPKPVIAMVHLP  175 (175)
Q Consensus       161 i~~---~~kPvIAaV~G~  175 (175)
                      +.+   .++|+|++|+|+
T Consensus       184 l~~~~~~~vP~IavV~G~  201 (304)
T 2f9y_B          184 LAKMQERGLPYISVLTDP  201 (304)
T ss_dssp             HHHHHHTTCCEEEEEEEE
T ss_pred             HHHHhcCCCCEEEEEECC
Confidence            654   499999999995

>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1

Probab=95.23  E-value=0.025  Score=44.00  Aligned_cols=60  Identities=15%  Similarity=0.058  Sum_probs=43.7

Q ss_pred             CCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHHHHHHhcCCCcEEEEeeC
Q 030574           95 FRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVHL  174 (175)
Q Consensus        95 l~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G  174 (175)
                      ++.++.+++.+.|..++.++.++.|+|.=     .|-|+++.                ....++..|..+++|+++.++|
T Consensus        54 I~~~~a~~i~~~L~~l~~~~~~k~I~l~I-----nSPGG~v~----------------ag~~I~~~i~~~~~pV~t~v~G  112 (218)
T 1y7o_A           54 VEDNMANSVIAQLLFLDAQDSTKDIYLYV-----NTPGGSVS----------------AGLAIVDTMNFIKADVQTIVMG  112 (218)
T ss_dssp             BCHHHHHHHHHHHHHHHHHCTTSCEEEEE-----EECCBCHH----------------HHHHHHHHHHHSSSCEEEEEEE
T ss_pred             ECHHHHHHHHHHHHHHHhcCCCCCEEEEE-----ECcCCCHH----------------HHHHHHHHHHhcCCCEEEEEcc
Confidence            88999999999999998877777777652     23343321                1234566788899999999987


Q ss_pred             C
Q 030574          175 P  175 (175)
Q Consensus       175 ~  175 (175)
                      .
T Consensus       113 ~  113 (218)
T 1y7o_A          113 M  113 (218)
T ss_dssp             E
T ss_pred             E
Confidence            3

>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}

Probab=92.96  E-value=0.68  Score=38.09  Aligned_cols=85  Identities=14%  Similarity=0.146  Sum_probs=51.9

Q ss_pred             CCCEEEEEEcCCC---------CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhh
Q 030574           78 GEGIAKITINRPD---------RRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYEN  148 (175)
Q Consensus        78 ~~~V~~ItLnrp~---------~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~  148 (175)
                      ++.-..|.-|++.         ..++++++..+...++++.++... +=+|.|.-.+ +++. |.+..          ..
T Consensus       115 ~G~~V~Via~d~~~~~~~~~~~~~G~~~~~~~~Ka~r~~~~A~~~~-~PlI~lvdt~-Ga~~-g~~ae----------~~  181 (327)
T 2f9i_A          115 NGRAVTVIGQQRGKDTKDNIYRNFGMAHPEGYRKALRLMKQAEKFN-RPIFTFIDTK-GAYP-GKAAE----------ER  181 (327)
T ss_dssp             TTEEEEEEEECCCSSHHHHHHTGGGCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEES-CSCC-CHHHH----------HT
T ss_pred             CCEEEEEEEEcCCCchhhhhhhhcCCCCHHHHHHHHHHHHHHhhcC-CCEEEEEeCC-CCCc-chhhh----------hh
Confidence            4544445555554         347899999999999999888664 3445444333 1221 21110          00


Q ss_pred             hhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          149 FGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       149 ~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .....+...+.++..+++|+||+|+|+
T Consensus       182 g~~~~~a~~l~al~~~~vPvIavV~G~  208 (327)
T 2f9i_A          182 GQSESIATNLIEMASLKVPVIAIVIGE  208 (327)
T ss_dssp             THHHHHHHHHHHHHTCSSCEEEEEEEE
T ss_pred             hhHHHHHHHHHHHHhCCCCEEEEEECC
Confidence            111223456778899999999999984

>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4

Probab=90.67  E-value=0.93  Score=37.47  Aligned_cols=71  Identities=17%  Similarity=0.127  Sum_probs=45.1

Q ss_pred             CCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHHHHHHhcCCCcEEEE
Q 030574           92 RNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAM  171 (175)
Q Consensus        92 ~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAa  171 (175)
                      .++++++..+...++++.++... +=+|.|.-.+ +++. |....          .......+...+.++..+++|+|++
T Consensus       152 ~G~~~~~~~~Ka~r~~~~A~~~~-lPlI~lvDt~-Ga~~-g~~aE----------~~g~~~~~a~~l~al~~~~vPvIav  218 (339)
T 2f9y_A          152 FGMPAPEGYRKALRLMQMAERFK-MPIITFIDTP-GAYP-GVGAE----------ERGQSEAIARNLREMSRLGVPVVCT  218 (339)
T ss_dssp             GGCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEES-CSCC-SHHHH----------HTTHHHHHHHHHHHHHTCSSCEEEE
T ss_pred             cCCCCHHHHHHHHHHHHHHhhcC-CCEEEEEeCC-CCcc-chHHH----------HHHHHHHHHHHHHHHHhCCCCEEEE
Confidence            46899999999999999887664 4455554333 1221 21110          0011122455677889999999999


Q ss_pred             eeCC
Q 030574          172 VHLP  175 (175)
Q Consensus       172 V~G~  175 (175)
                      |+|+
T Consensus       219 V~G~  222 (339)
T 2f9y_A          219 VIGE  222 (339)
T ss_dssp             EEEE
T ss_pred             EeCC
Confidence            9984

>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A

Probab=90.01  E-value=0.79  Score=35.03  Aligned_cols=57  Identities=9%  Similarity=-0.004  Sum_probs=39.7

Q ss_pred             CCHHHHHHHHHHHHHhhcCCCceEEEE--ecCCCCcccCCCCCCccccCCccchhhhhHhhHHHHHHHHhcCCCcEEEEe
Q 030574           95 FRPHTVKELIRAFNDARDDSSVGVIIL--TGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV  172 (175)
Q Consensus        95 l~~~~~~eL~~al~~~~~d~~vkvvVl--tG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV  172 (175)
                      ++..+.+.+.+.|..++.++.++.|+|  -+-|+..|+                       ...++..|.++++|+++.+
T Consensus        36 I~~~~a~~i~~~L~~~~~~~~~k~I~l~InSPGG~v~a-----------------------~~~I~~~i~~~~~pV~~~v   92 (208)
T 2cby_A           36 VNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISA-----------------------GMAIYDTMVLAPCDIATYA   92 (208)
T ss_dssp             BCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHH-----------------------HHHHHHHHHHCSSCEEEEE
T ss_pred             ECHHHHHHHHHHHHHHHhCCCCCCEEEEEECCCCCHHH-----------------------HHHHHHHHHhcCCCEEEEE
Confidence            678899999999998887666665554  333311111                       2355667888999999988


Q ss_pred             eC
Q 030574          173 HL  174 (175)
Q Consensus       173 ~G  174 (175)
                      .|
T Consensus        93 ~g   94 (208)
T 2cby_A           93 MG   94 (208)
T ss_dssp             EE
T ss_pred             Cc
Confidence            76

>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1

Probab=86.18  E-value=1.7  Score=34.86  Aligned_cols=23  Identities=13%  Similarity=0.200  Sum_probs=19.9

Q ss_pred             HHHHHHHhhcCCCceEEEEecCC
Q 030574          103 LIRAFNDARDDSSVGVIILTGKG  125 (175)
Q Consensus       103 L~~al~~~~~d~~vkvvVltG~g  125 (175)
                      +.+.++.+.+||++++|++.+.+
T Consensus       187 ~~d~l~~~~~D~~t~~I~l~~E~  209 (288)
T 1oi7_A          187 FKDLLPLFNEDPETEAVVLIGEI  209 (288)
T ss_dssp             HHHHHHHHHTCTTCCEEEEEECS
T ss_pred             HHHHHHHHhcCCCCCEEEEEEee
Confidence            45778888999999999999986

>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*

Probab=85.38  E-value=1.7  Score=34.76  Aligned_cols=23  Identities=17%  Similarity=0.300  Sum_probs=18.9

Q ss_pred             HHHHHHHhhcCCCceEEEEecCC
Q 030574          103 LIRAFNDARDDSSVGVIILTGKG  125 (175)
Q Consensus       103 L~~al~~~~~d~~vkvvVltG~g  125 (175)
                      +.+.++.+.+||++++|++.+.+
T Consensus       187 ~~d~l~~l~~D~~t~~I~l~~E~  209 (288)
T 2nu8_A          187 FIDILEMFEKDPQTEAIVMIGEI  209 (288)
T ss_dssp             HHHHHHHHHTCTTCCEEEEEEES
T ss_pred             HHHHHHHHhcCCCCCEEEEEEee
Confidence            35777888889999999999876

>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}

Probab=84.96  E-value=1.9  Score=34.76  Aligned_cols=23  Identities=17%  Similarity=0.322  Sum_probs=19.8

Q ss_pred             HHHHHHHhhcCCCceEEEEecCC
Q 030574          103 LIRAFNDARDDSSVGVIILTGKG  125 (175)
Q Consensus       103 L~~al~~~~~d~~vkvvVltG~g  125 (175)
                      +.+.++.+.+||++++|++.+.+
T Consensus       194 ~~d~l~~~~~D~~T~~I~l~~E~  216 (297)
T 2yv2_A          194 FTEALKLFQEDPQTEALVLIGEI  216 (297)
T ss_dssp             HHHHHHHHHTCTTCSEEEEEECS
T ss_pred             HHHHHHHHhcCCCCCEEEEEEee
Confidence            46778888999999999999886

>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}

Probab=82.94  E-value=1.7  Score=34.91  Aligned_cols=23  Identities=13%  Similarity=0.212  Sum_probs=19.9

Q ss_pred             HHHHHHHhhcCCCceEEEEecCC
Q 030574          103 LIRAFNDARDDSSVGVIILTGKG  125 (175)
Q Consensus       103 L~~al~~~~~d~~vkvvVltG~g  125 (175)
                      +.+.++.+.+||++++|++.+.+
T Consensus       193 ~~d~l~~~~~D~~T~~I~l~~E~  215 (294)
T 2yv1_A          193 YKEVLDLFEKDDETEAIVMIGEI  215 (294)
T ss_dssp             HHHHHHHHHTCTTCSEEEEEEES
T ss_pred             HHHHHHHHhcCCCCCEEEEEEee
Confidence            46778888999999999999886

>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*

Probab=80.23  E-value=2.4  Score=34.31  Aligned_cols=23  Identities=22%  Similarity=0.222  Sum_probs=19.4

Q ss_pred             HHHHHHHhhcCCCceEEEEecCC
Q 030574          103 LIRAFNDARDDSSVGVIILTGKG  125 (175)
Q Consensus       103 L~~al~~~~~d~~vkvvVltG~g  125 (175)
                      +.+.++.+.+||++++|++.+.+
T Consensus       195 ~~d~l~~~~~Dp~T~~I~l~~E~  217 (305)
T 2fp4_A          195 FTDCLEIFLNDPATEGIILIGEI  217 (305)
T ss_dssp             HHHHHHHHHHCTTCCEEEEEEES
T ss_pred             HHHHHHHHhcCCCCcEEEEEEec
Confidence            45777888889999999999876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	175
d1q52a_	297	c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacter	1e-24
d1mj3a_	260	c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat	2e-18
d1uiya_	253	c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {The	7e-16
d1nzya_	269	c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Ps	4e-15
d1dcia_	275	c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2	6e-15
d2f6qa1	245	c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-C	4e-13
d1pjha_	266	c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2	2e-12
d1wdka4	310	c.14.1.3 (A:1-310) Fatty oxidation complex alpha s	5e-12
d1szoa_	249	c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus	5e-12
d1ef8a_	261	c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Esc	2e-11
d1hzda_	266	c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [T	5e-11
d2fw2a1	258	c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Hum	8e-11
d2a7ka1	230	c.14.1.3 (A:1-230) Carbapenem biosynthes protein C	4e-10
d1wz8a1	263	c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TT	4e-10
d1sg4a1	249	c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-d	2e-09

>d1q52a_ c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacterium tuberculosis [TaxId: 1773]} Length = 297

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Naphthoate synthase MenB
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 94.8 bits (234), Expect = 1e-24
 Identities = 48/139 (34%), Positives = 66/139 (47%), Gaps = 18/139 (12%)

Query: 51  PSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDA 110
           P     WR+   +   + TDI Y + V +   ++  NRP+ RNAFRPHTV EL R  + A
Sbjct: 2   PFDAKAWRLV--DGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHA 59

Query: 111 RDDSSVGVIILTGKGTEAFC----------------SGGDQALRTRDGYADYENFGRLNV 154
           R    VGV++LTG G                     SG   A        D    GRL++
Sbjct: 60  RMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHI 119

Query: 155 LDLQVQIRRLPKPVIAMVH 173
           L++Q  IR +PK VI +V+
Sbjct: 120 LEVQRLIRFMPKVVICLVN 138

>d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 260

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 77.5 bits (190), Expect = 2e-18
 Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 5/107 (4%)

Query: 68  FTDIIYEK-AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
           F  II EK      +  I +NRP   NA     ++EL +A     +D +VG I+LTG   
Sbjct: 3   FQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEK 62

Query: 127 EAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
                   + ++ R     Y        L     I R+ KPVIA V+
Sbjct: 63  AFAAGADIKEMQNRTFQDCYSG----KFLSHWDHITRIKKPVIAAVN 105

>d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]} Length = 253

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Thermus thermophilus [TaxId: 274]

 Score = 70.9 bits (172), Expect = 7e-16
 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 1/95 (1%)

Query: 80  GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQAL-R 138
            +A + +N P+RRN   P     L++A +D   D  V  ++LTG+G           L R
Sbjct: 8   HVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLER 67

Query: 139 TRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
             +  A+      L+++ L  ++   PKP +A V+
Sbjct: 68  VTELGAEENYRHSLSLMRLFHRVYTYPKPTVAAVN 102

>d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]} Length = 269

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 4-Chlorobenzoyl-CoA dehalogenase
species: Pseudomonas sp., strain CBS-3 [TaxId: 306]

 Score = 69.1 bits (167), Expect = 4e-15
 Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 2/108 (1%)

Query: 68  FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
           +  I +   V +G+A+ITI  P  RNA     ++E+  A N A +D SVG +++TG    
Sbjct: 2   YEAIGHR--VEDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDA 59

Query: 128 AFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP 175
                  + +    G A   +  R+  L     I ++ +    ++   
Sbjct: 60  FCAGFYLREIPLDKGVAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAI 107

>d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 275

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 68.6 bits (166), Expect = 6e-15
 Identities = 24/115 (20%), Positives = 41/115 (35%), Gaps = 10/115 (8%)

Query: 68  FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
           +  I       + +  + +NRP++RNA      +EL+  F     DS    ++++G G  
Sbjct: 2   YESIQVTS-AQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKM 60

Query: 128 AFCSGGDQALRTRDG---------YADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
                    + +             A Y              I + PKPVIA +H
Sbjct: 61  FTSGIDLMDMASDILQPPGDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIH 115

>d2f6qa1 c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Peroxisomal 3,2-trans-enoyl-CoA isomerase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.2 bits (152), Expect = 4e-13
 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 5/108 (4%)

Query: 68  FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
           F  ++      +GI KI  NRP ++NA       E++RA   A  D S+ + +LTG G  
Sbjct: 2   FETLVVTSE--DGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDY 58

Query: 128 AFCSG--GDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
                   +       G  +      + + +        PKP+IA+V+
Sbjct: 59  YSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVN 106

>d1pjha_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 266

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.2 bits (147), Expect = 2e-12
 Identities = 15/116 (12%), Positives = 28/116 (24%), Gaps = 11/116 (9%)

Query: 67  EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
           +   I Y          I +  PD  NA        L      A  +  V   I+   G 
Sbjct: 3   QNEKISYRIE--GPFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGR 60

Query: 127 EAFCSGGDQALRTRDGYADYENFGRL---------NVLDLQVQIRRLPKPVIAMVH 173
                   + +    G    +                + +     +  K +I  ++
Sbjct: 61  FFSSGADFKGIAKAQGDDTNKYPSETSKWVSNFVARNVYVTDAFIKHSKVLICCLN 116

>d1wdka4 c.14.1.3 (A:1-310) Fatty oxidation complex alpha subunit, N-terminal domain {Pseudomonas fragi [TaxId: 296]} Length = 310

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Fatty oxidation complex alpha subunit, N-terminal domain
species: Pseudomonas fragi [TaxId: 296]

 Score = 60.5 bits (145), Expect = 5e-12
 Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 2/99 (2%)

Query: 77  VGEGIAKITIN-RPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQ 135
           +  GI ++  + + +  N F   T+ EL +A +  + D+SV  +I++             
Sbjct: 13  LESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSSGKDVFIVGADIT 72

Query: 136 A-LRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
             +            G L    +      L  P +A ++
Sbjct: 73  EFVENFKLPDAELIAGNLEANKIFSDFEDLNVPTVAAIN 111

>d1szoa_ c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus erythropolis [TaxId: 1833]} Length = 249

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 6-oxo camphor hydrolase
species: Rhodococcus erythropolis [TaxId: 1833]

 Score = 60.1 bits (144), Expect = 5e-12
 Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 62  DESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVI 119
            E   ++ +I  E+    G+  +T++   +   +      EL   F+D   D    V+
Sbjct: 6   QEYSQKYENIRLERD--GGVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVV 61

>d1ef8a_ c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Escherichia coli [TaxId: 562]} Length = 261

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Methylmalonyl CoA decarboxylase
species: Escherichia coli [TaxId: 562]

 Score = 58.3 bits (139), Expect = 2e-11
 Identities = 22/107 (20%), Positives = 41/107 (38%), Gaps = 4/107 (3%)

Query: 67  EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
            +  +         +A I  N   + NA     + +L++A +D        +I+    G+
Sbjct: 2   SYQYVNVVTI--NKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPEIRCIILRAPSGS 59

Query: 127 EAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
           + F +G D       G         L    +   I++ PKP+I+MV 
Sbjct: 60  KVFSAGHDIHELPSGGRDPLSYDDPLR--QITRMIQKFPKPIISMVE 104

>d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]} Length = 266

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: AUH protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (137), Expect = 5e-11
 Identities = 19/73 (26%), Positives = 33/73 (45%)

Query: 79  EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR 138
            GI  + INR   +N+   + +K L +A +  + D  V  II+  +    FC+G D   R
Sbjct: 14  RGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKER 73

Query: 139 TRDGYADYENFGR 151
            +   ++   F  
Sbjct: 74  AKMSSSEVGPFVS 86

>d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Chromodomain protein CDY2A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.8 bits (135), Expect = 8e-11
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)

Query: 68  FTDIIYEKAVGEGIAKITIN-RPDRRNAFRPHTVKELIRAFNDARDDSSVGVII 120
           + DI+ +K   +G  +I ++ R   +NA     +KE++ A N A  D S  V+ 
Sbjct: 1   YRDIVVKKE--DGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAADDSKLVLF 52

>d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]} Length = 230

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Carbapenem biosynthes protein CarB
species: Pectobacterium carotovorum [TaxId: 554]

 Score = 54.8 bits (130), Expect = 4e-10
 Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 71  IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSV 116
           +++E+   + +  IT++ P++ N F       +  A   A  D SV
Sbjct: 1   MVFEE-NSDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSV 45

>d1wz8a1 c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TTHA0218 {Thermus thermophilus [TaxId: 274]} Length = 263

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Probable enoyl-CoA hydratase TTHA0218
species: Thermus thermophilus [TaxId: 274]

 Score = 54.9 bits (130), Expect = 4e-10
 Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 67  EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
            +  + +      G+ +IT  R ++ NA  P   + L R + D      V  ++L G+G 
Sbjct: 7   RYPGLAFAW-PRPGVLEITF-RGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGG 64

Query: 127 EAFC 130
               
Sbjct: 65  VFSA 68

>d1sg4a1 c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 249

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score = 52.5 bits (124), Expect = 2e-09
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 71  IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFC 130
           ++ E   G G+A +    P   N+     + EL+ +     +D S   +ILT      F 
Sbjct: 4   VLVEPDAGAGVAVMKFKNPP-VNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFS 62

Query: 131 SG 132
           +G
Sbjct: 63  AG 64

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	175
d2a7ka1	230	Carbapenem biosynthes protein CarB {Pectobacterium	99.91
d1szoa_	249	6-oxo camphor hydrolase {Rhodococcus erythropolis	99.91
d1pjha_	266	Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso	99.91
d1nzya_	269	4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp.,	99.9
d1ef8a_	261	Methylmalonyl CoA decarboxylase {Escherichia coli	99.9
d1mj3a_	260	Enoyl-CoA hydratase (crotonase) {Rat (Rattus norve	99.9
d1sg4a1	249	Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso	99.89
d1dcia_	275	Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso	99.89
d2f6qa1	245	Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (	99.89
d1wz8a1	263	Probable enoyl-CoA hydratase TTHA0218 {Thermus the	99.89
d1q52a_	297	Naphthoate synthase MenB {Mycobacterium tuberculos	99.89
d1uiya_	253	Enoyl-CoA hydratase (crotonase) {Thermus thermophi	99.88
d1wdka4	310	Fatty oxidation complex alpha subunit, N-terminal	99.88
d2fw2a1	258	Chromodomain protein CDY2A {Human (Homo sapiens) [	99.87
d1hzda_	266	AUH protein {Human (Homo sapiens) [TaxId: 9606]}	99.86
d2csua2	161	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	83.34

>d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Carbapenem biosynthes protein CarB
species: Pectobacterium carotovorum [TaxId: 554]

Probab=99.91  E-value=1e-24  Score=171.84  Aligned_cols=103  Identities=23%  Similarity=0.335  Sum_probs=88.2

Q ss_pred             EEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhH
Q 030574           72 IYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGR  151 (175)
Q Consensus        72 ~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~  151 (175)
                      .++.. +++|++||||||+++|+|+.+|+.+|.++++.++.|+++|+|||+|.|+++||+|+|++++.............
T Consensus         2 ~~~~~-~d~I~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~i~~vVl~~~g~~~F~aG~Dl~~~~~~~~~~~~~~~~   80 (230)
T d2a7ka1           2 VFEEN-SDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWI   80 (230)
T ss_dssp             EEEEE-ETTEEEEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-CHHHHHHHH
T ss_pred             EEEEe-cCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCcccccceeccchhhhhhhcccccccccccccccccch
Confidence            34554 88999999999999999999999999999999999999999999998878999999999987654433333334


Q ss_pred             hhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          152 LNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       152 ~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ..+++++.++.++|||+||+|||+
T Consensus        81 ~~~~~~~~~i~~~~kpvIaav~G~  104 (230)
T d2a7ka1          81 DRVIDLYQAVLNVNKPTIAAVDGY  104 (230)
T ss_dssp             HHHHHHHHHHHTCCSCEEEEECSE
T ss_pred             hhhhhhhhcccchhcceeeecccc
Confidence            456788999999999999999995

>d1szoa_ c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus erythropolis [TaxId: 1833]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 6-oxo camphor hydrolase
species: Rhodococcus erythropolis [TaxId: 1833]

Probab=99.91  E-value=1.1e-24  Score=173.63  Aligned_cols=107  Identities=24%  Similarity=0.375  Sum_probs=94.1

Q ss_pred             CCCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCcc
Q 030574           65 GTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYA  144 (175)
Q Consensus        65 ~~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~  144 (175)
                      ..+|++|.+++  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++......
T Consensus         9 ~~~y~~i~~~~--~~~v~~itln~p~~~Nal~~~~~~el~~al~~~~~d~~v~~vvl~g~g-~~FsaG~Dl~~~~~~~~~   85 (249)
T d1szoa_           9 SQKYENIRLER--DGGVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTG-PSFCNEIDFTSFNLGTPH   85 (249)
T ss_dssp             TTSCTTEEEEE--ETTEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBT-TBSBCEECGGGSCCSSHH
T ss_pred             hCCCCeEEEEE--ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcceEeeeccc-ccccccchhhhhhccccc
Confidence            46899999998  799999999999999999999999999999999999999999999999 899999999998655444


Q ss_pred             chhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          145 DYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       145 ~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ..... ...++.++.+|.++|||+||+|+|+
T Consensus        86 ~~~~~-~~~~~~l~~~i~~~~~pvIa~v~g~  115 (249)
T d1szoa_          86 DWDEI-IFEGQRLLNNLLSIEVPVIAAVNGP  115 (249)
T ss_dssp             HHHHH-HHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred             chhhh-hhhhhhhhhhcccCcccceeeeccc
Confidence            33332 2346788899999999999999985

>d1pjha_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=8e-25  Score=175.54  Aligned_cols=106  Identities=19%  Similarity=0.119  Sum_probs=88.4

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccch
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADY  146 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~  146 (175)
                      +++.|.++.  +++|++|+||||+++|+|+.+|+.+|.++|+.++.|+++++|||+|.| ++||+|+||+++........
T Consensus         3 ~~e~i~~~~--~~~v~~Itlnrp~~~Na~~~~~~~el~~al~~~~~d~~v~~vVl~g~g-~~FsaG~Dl~~~~~~~~~~~   79 (266)
T d1pjha_           3 QNEKISYRI--EGPFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSG-RFFSSGADFKGIAKAQGDDT   79 (266)
T ss_dssp             CBTTEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBT-TBSBCCBCHHHHHC------
T ss_pred             CCCeEEEEE--ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeccc-cccccchhHHHHHhcccccc
Confidence            567899988  899999999999999999999999999999999999999999999999 99999999998765332110


Q ss_pred             ----------hhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          147 ----------ENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       147 ----------~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                                ...+...++.+...+.++|||+||+|||+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAav~G~  118 (266)
T d1pjha_          80 NKYPSETSKWVSNFVARNVYVTDAFIKHSKVLICCLNGP  118 (266)
T ss_dssp             -CCSSHHHHHHHHTHHHHHHHHHHHHHCCSEEEEEECSC
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHhcchhhhhhhhcc
Confidence                      11122235667888999999999999996

>d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 4-Chlorobenzoyl-CoA dehalogenase
species: Pseudomonas sp., strain CBS-3 [TaxId: 306]

Probab=99.90  E-value=3.8e-24  Score=171.92  Aligned_cols=105  Identities=30%  Similarity=0.405  Sum_probs=89.5

Q ss_pred             cccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccch-
Q 030574           68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADY-  146 (175)
Q Consensus        68 ~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~-  146 (175)
                      |+.|.++.  ++||++|+||||+++|+||.+|+.+|.++++.+++|+++++|||+|.| +.||+|+|++++........ 
T Consensus         2 y~~i~~~i--~dgVa~Itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~i~~vvltg~g-~~F~aG~Dl~~~~~~~~~~~~   78 (269)
T d1nzya_           2 YEAIGHRV--EDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAE-DAFCAGFYLREIPLDKGVAGV   78 (269)
T ss_dssp             CSSEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TCSBCCBCGGGSCSSSHHHHH
T ss_pred             CCceEEEE--ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCc-ccccchhhHHHHhhcccccch
Confidence            56788888  899999999999999999999999999999999999999999999999 89999999998865433221 


Q ss_pred             ---hhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          147 ---ENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       147 ---~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                         .......++++..+|.+||||+||+|||+
T Consensus        79 ~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~  110 (269)
T d1nzya_          79 RDHFRIAALWWHQMIHKIIRVKRPVLAAINGV  110 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCSSCEEEEECSE
T ss_pred             hhHHHHHHHHHHHHHHHHHhhcchhehhhhhh
Confidence               11122235678889999999999999995

>d1ef8a_ c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Methylmalonyl CoA decarboxylase
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=3.8e-24  Score=171.31  Aligned_cols=105  Identities=22%  Similarity=0.320  Sum_probs=85.9

Q ss_pred             CCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecC-CCCcccCCCCCCccccCCcc
Q 030574           66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGK-GTEAFCSGGDQALRTRDGYA  144 (175)
Q Consensus        66 ~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~-g~~~FcaG~Dl~~~~~~~~~  144 (175)
                      |+|+.|.++.  +++|++|+||||+++|+|+.+|+.+|.++++++++ +++++|||+|. |+++||+|+||+++......
T Consensus         1 M~~~~i~~~~--~~~v~~Itlnrp~~~Nal~~~~~~~l~~al~~~~~-~~~~~vVl~g~~g~~~F~aG~Dl~~~~~~~~~   77 (261)
T d1ef8a_           1 MSYQYVNVVT--INKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNR-PEIRCIILRAPSGSKVFSAGHDIHELPSGGRD   77 (261)
T ss_dssp             CCCSSEEEEE--ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHTCS-TTCCEEEEECCTTCSEEECCSCSTTC-----C
T ss_pred             CCCCEEEEEE--ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhC-CCCEEEEEeccccchhhcccccccccccCCcc
Confidence            5678899998  89999999999999999999999999999999984 57999999986 44899999999988654332


Q ss_pred             chhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          145 DYENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       145 ~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ...  ....+++++.+|.++|||+||+|||+
T Consensus        78 ~~~--~~~~~~~~~~~i~~~~kPvIAav~G~  106 (261)
T d1ef8a_          78 PLS--YDDPLRQITRMIQKFPKPIISMVEGS  106 (261)
T ss_dssp             TTC--TTSHHHHHHHHHHHCSSCEEEEECSE
T ss_pred             ccc--cccchhhhHHHHHhCchhhhhccccc
Confidence            221  12235678889999999999999995

>d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=1.3e-24  Score=173.18  Aligned_cols=105  Identities=33%  Similarity=0.433  Sum_probs=87.4

Q ss_pred             CcccEEEEEE-eCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccc
Q 030574           67 EFTDIIYEKA-VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYAD  145 (175)
Q Consensus        67 ~~~~v~~e~~-~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~  145 (175)
                      .|+.|.+|+. .+++|++||||||+++|+|+.+|+.+|.++|+.++.|+++++|||+|.| ++||+|+|++++.......
T Consensus         2 ~~~~i~~e~~g~~~~I~~itlnrP~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~   80 (260)
T d1mj3a_           2 NFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGE-KAFAAGADIKEMQNRTFQD   80 (260)
T ss_dssp             CCSSEEEEEESGGGCEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCS-SEEECCBCHHHHTTCCHHH
T ss_pred             CCeEEEEEEEcCCCCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCcceEEEeccc-ccccccchhhhhhccchhh
Confidence            5788999984 1268999999999999999999999999999999999999999999999 9999999999876533221


Q ss_pred             hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .   ....+.+++..+.+++||+||+|||+
T Consensus        81 ~---~~~~~~~~~~~~~~~~kPvIaav~G~  107 (260)
T d1mj3a_          81 C---YSGKFLSHWDHITRIKKPVIAAVNGY  107 (260)
T ss_dssp             H---HHC--CCGGGGGGGCSSCEEEEECSE
T ss_pred             h---hHHHHHHHHHHhccCCCeEEEEEcCe
Confidence            1   22224556678899999999999995

>d1sg4a1 c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.89  E-value=1.2e-23  Score=167.55  Aligned_cols=105  Identities=19%  Similarity=0.277  Sum_probs=89.5

Q ss_pred             ccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhh
Q 030574           69 TDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYEN  148 (175)
Q Consensus        69 ~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~  148 (175)
                      +.|.++.+.++||++|+||||+ .|+|+.+|+.+|.++++.+++|+++++|||+|.|+++||+|+|++++..........
T Consensus         2 ~~ilve~~~~~gIa~itln~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~~Fs~G~Dl~~~~~~~~~~~~~   80 (249)
T d1sg4a1           2 QRVLVEPDAGAGVAVMKFKNPP-VNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPAHYAG   80 (249)
T ss_dssp             CSEEEEEETTTTEEEEEECCTT-TTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCCHHHHHH
T ss_pred             CcEEEEEECCCCEEEEEECCCC-cCCCCHHHHHHHHHHHHHHHhCCCccEEEEEeccceeEecccccccccccccccccc
Confidence            4577888767899999999996 699999999999999999999999999999999856899999999886644333333


Q ss_pred             hhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          149 FGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       149 ~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                       ....+++++.++.++|||+||+|||+
T Consensus        81 -~~~~~~~~~~~l~~~~kpvIa~v~G~  106 (249)
T d1sg4a1          81 -YWKAVQELWLRLYQSNLVLVSAINGA  106 (249)
T ss_dssp             -HHHHHHHHHHHHHTCSSEEEEEECEE
T ss_pred             -cchhhHHHHHhhhcCccccchhhccc
Confidence             33346788999999999999999995

>d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=8e-24  Score=170.06  Aligned_cols=106  Identities=26%  Similarity=0.367  Sum_probs=87.2

Q ss_pred             cccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccc--
Q 030574           68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYAD--  145 (175)
Q Consensus        68 ~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~--  145 (175)
                      |+++.++.. +++|++||||||+++|+|+.+|+.+|.++|+.++.|+++++|||+|.| ++||+|+|+.++.......  
T Consensus         2 y~~l~~~~~-~~~I~~itlnrP~~~Nals~~m~~el~~~l~~~~~d~~v~~vvltg~~-~~F~aG~dl~~~~~~~~~~~~   79 (275)
T d1dcia_           2 YESIQVTSA-QKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAG-KMFTSGIDLMDMASDILQPPG   79 (275)
T ss_dssp             CSSEEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEEST-TCSBCCBCHHHHHHHHTSCCC
T ss_pred             CceEEEEEc-cCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeccc-cccccCccHHHhhhccccccc
Confidence            677888664 799999999999999999999999999999999999999999999998 9999999998765321111  


Q ss_pred             ---hh-----hhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 ---YE-----NFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ---~~-----~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                         ..     ......++.++..+.++|||+||+|||+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~  117 (275)
T d1dcia_          80 DDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGG  117 (275)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSE
T ss_pred             ccccchhhhhccchhhhHHHHHHHHhcCCCEEEEEeeE
Confidence               10     1111234677788999999999999995

>d2f6qa1 c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Peroxisomal 3,2-trans-enoyl-CoA isomerase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.4e-23  Score=164.42  Aligned_cols=104  Identities=31%  Similarity=0.508  Sum_probs=85.1

Q ss_pred             cccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchh
Q 030574           68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYE  147 (175)
Q Consensus        68 ~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~  147 (175)
                      |++|.+++  +++|++|+||||+++|+|+.+|+.+|.++++.++.|+.+ +||++|.| ++||+|+|++++.........
T Consensus         2 ~~~i~~~~--~~gi~~Itlnrp~~~Nals~~~~~~l~~~l~~~~~d~~v-~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~   77 (245)
T d2f6qa1           2 FETLVVTS--EDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNG-DYYSSGNDLTNFTDIPPGGVE   77 (245)
T ss_dssp             CSSEEEEE--ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEEST-TCSBCCBCC----CCCTTHHH
T ss_pred             cceEEEEE--ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHhcCCce-EEeecCCC-ccccCCccchhhhcccccccc
Confidence            67899998  799999999999999999999999999999999999876 89999999 899999999988764433221


Q ss_pred             h---hhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          148 N---FGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       148 ~---~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .   .....+++++.+|..+|||+||+|||+
T Consensus        78 ~~~~~~~~~~~~~~~~i~~~~kpvIa~v~G~  108 (245)
T d2f6qa1          78 EKAKNNAVLLREFVGCFIDFPKPLIAVVNGP  108 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCCSCEEEEECSC
T ss_pred             cccchhhhHHHHHHhhhhhcCCceEEEECCc
Confidence            1   222235678889999999999999996

>d1wz8a1 c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TTHA0218 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Probable enoyl-CoA hydratase TTHA0218
species: Thermus thermophilus [TaxId: 274]

Probab=99.89  E-value=5.9e-24  Score=170.43  Aligned_cols=106  Identities=24%  Similarity=0.360  Sum_probs=89.4

Q ss_pred             CcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCcc-c
Q 030574           67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYA-D  145 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~-~  145 (175)
                      .|+.+.++.. ++||++|+| ||+++|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++...... +
T Consensus         7 ~~~~i~~~~~-~~gV~~itl-rp~~~Nal~~~m~~el~~~~~~~~~d~~vr~vvl~g~g-~~FsaG~Dl~~~~~~~~~~~   83 (263)
T d1wz8a1           7 RYPGLAFAWP-RPGVLEITF-RGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEG-GVFSAGGSFGLIEEMRASHE   83 (263)
T ss_dssp             HCTTEEEEEE-ETTEEEEEE-CCSGGGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGG-GCCBCCBCHHHHHHHHHCHH
T ss_pred             CCCeEEEEEc-CCCEEEEEE-CCCCCCCCCHHHHHHHHHHHHHHhhCCCCeEEEEeccc-ccccccchhhhhhhhccccc
Confidence            5778999876 788999999 89999999999999999999999999999999999999 999999999987643211 1


Q ss_pred             hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 ~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .........++++.+|.++|||+||+|||+
T Consensus        84 ~~~~~~~~~~~~~~~i~~~~kPvIa~v~G~  113 (263)
T d1wz8a1          84 ALLRVFWEARDLVLGPLNFPRPVVAAVEKV  113 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSSCEEEEECSE
T ss_pred             ccccchhhhhHHHHHhhhhhcceeeecccc
Confidence            112222345788889999999999999995

>d1q52a_ c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Naphthoate synthase MenB
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.89  E-value=2.4e-23  Score=169.39  Aligned_cols=122  Identities=45%  Similarity=0.763  Sum_probs=88.3

Q ss_pred             cccchhhhhccCCCCCcccEEEEEEeCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCC------
Q 030574           52 SHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG------  125 (175)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~v~~e~~~~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g------  125 (175)
                      ..|..|+.  .+.-+++++|.|++++++||++||||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.|      
T Consensus         3 ~~~~~~~~--~~~~~~~~~i~~~~~~~~gi~~ItlnRP~~~NAl~~~m~~eL~~~l~~~~~d~~vr~vVltg~~~~f~~g   80 (297)
T d1q52a_           3 FDAKAWRL--VDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDG   80 (297)
T ss_dssp             CCGGGEEE--CTTCTTCSSEEEEEESSSSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTC
T ss_pred             CCHHHCcc--cCCcCCCcceEEEEEccCCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCccEEEEecCCCcccch
Confidence            45677853  2334567889999877899999999999999999999999999999999999999999999984      


Q ss_pred             CCcccCCCCCCccccCCccch----------hhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          126 TEAFCSGGDQALRTRDGYADY----------ENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       126 ~~~FcaG~Dl~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                      ++.||+|+|++..........          .......+.++...|..++|||||+|||+
T Consensus        81 G~~f~ag~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~  140 (297)
T d1q52a_          81 GWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGW  140 (297)
T ss_dssp             CCEEECCC-----------------------------CHHHHHHHHHHSSSEEEEEECSE
T ss_pred             hhhhhhcchhhhhcccccccccccccchhhhHHHHHHHHHHHHHHHHhcCCeEEEEEcce
Confidence            256777778775543221110          11112235678888999999999999995

>d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Thermus thermophilus [TaxId: 274]

Probab=99.88  E-value=3.6e-23  Score=164.07  Aligned_cols=97  Identities=31%  Similarity=0.513  Sum_probs=82.5

Q ss_pred             CCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccc--hhhhhHhhHH
Q 030574           78 GEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYAD--YENFGRLNVL  155 (175)
Q Consensus        78 ~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~--~~~~~~~~~~  155 (175)
                      +|+|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.| +.||+|+|++.+.......  ........++
T Consensus         6 ~G~va~Itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~v~~vvl~g~g-~~f~aG~dl~~~~~~~~~~~~~~~~~~~~~~   84 (253)
T d1uiya_           6 KGHVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRG-KAFSAGADLAFLERVTELGAEENYRHSLSLM   84 (253)
T ss_dssp             CSSEEEEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESS-SCSBCCCCHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred             eCCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeccc-ccccccchhHHhhhccccCcccccchhhhhh
Confidence            577999999999999999999999999999999999999999999999 8999999998775433222  1222233457


Q ss_pred             HHHHHHhcCCCcEEEEeeCC
Q 030574          156 DLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       156 ~~~~~i~~~~kPvIAaV~G~  175 (175)
                      .++..|.++|||+||+|||+
T Consensus        85 ~~~~~i~~~~kpvIaav~G~  104 (253)
T d1uiya_          85 RLFHRVYTYPKPTVAAVNGP  104 (253)
T ss_dssp             HHHHHHHHCSSCEEEEECSC
T ss_pred             hhhhHHhcCCCCEEEEeCeE
Confidence            78889999999999999996

>d1wdka4 c.14.1.3 (A:1-310) Fatty oxidation complex alpha subunit, N-terminal domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Fatty oxidation complex alpha subunit, N-terminal domain
species: Pseudomonas fragi [TaxId: 296]

Probab=99.88  E-value=8.1e-23  Score=167.53  Aligned_cols=107  Identities=21%  Similarity=0.239  Sum_probs=89.5

Q ss_pred             CcccEEEEEEeCCCEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccc
Q 030574           67 EFTDIIYEKAVGEGIAKITIN-RPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYAD  145 (175)
Q Consensus        67 ~~~~v~~e~~~~~~V~~ItLn-rp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~  145 (175)
                      +++.+.++.. ++||++|+|| ||++.|+|+.+|+.+|.++++.++.|+++++|||+|.| +.||+|+||+++.......
T Consensus         4 ~~~~i~~~~~-~~gva~i~ln~~p~~~Nal~~~~~~el~~al~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~   81 (310)
T d1wdka4           4 EGKAITVTAL-ESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSSGK-DVFIVGADITEFVENFKLP   81 (310)
T ss_dssp             ECSSEEEEEC-GGGEEEEEECCTTSSSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEESS-SSSBBCCCHHHHHHHTTSC
T ss_pred             CCceEEEEEe-cCCEEEEEECCCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCccchhhhhhhhhccccc
Confidence            3467888775 8899999998 89999999999999999999999999999999999998 8999999999876432221


Q ss_pred             -h-hhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 -Y-ENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 -~-~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                       . .......+++++.+|.+++||+||+|||+
T Consensus        82 ~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~  113 (310)
T d1wdka4          82 DAELIAGNLEANKIFSDFEDLNVPTVAAINGI  113 (310)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCSSCEEEEECSC
T ss_pred             chhhhhhhhHHHHHHHHhhcCCccceeecccc
Confidence             1 11122246788899999999999999996

>d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Chromodomain protein CDY2A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.1e-22  Score=162.55  Aligned_cols=104  Identities=24%  Similarity=0.438  Sum_probs=86.7

Q ss_pred             cccEEEEEEeCCCEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccc-
Q 030574           68 FTDIIYEKAVGEGIAKITIN-RPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYAD-  145 (175)
Q Consensus        68 ~~~v~~e~~~~~~V~~ItLn-rp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~-  145 (175)
                      |++|.+++  +++|++|+|| ||+++|+|+.+|+.+|.++++.++.| ++++|||+|.| ++||+|+|++++....... 
T Consensus         1 y~~i~v~~--~~gi~~i~l~~rp~~~Nals~~~~~el~~al~~~~~d-~~~~vvl~g~g-~~FsaG~Dl~~~~~~~~~~~   76 (258)
T d2fw2a1           1 YRDIVVKK--EDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAAD-DSKLVLFSAAG-SVFCCGLDFGYFVRHLRNDR   76 (258)
T ss_dssp             CCSEEEEE--ETTEEEEEECCSSSSTTCBCHHHHHHHHHHHHHHHHS-SCSEEEEEECS-SCSBCCBCHHHHHHHHHHCH
T ss_pred             CceEEEEE--ECCEEEEEECCCCcccCCCCHHHHHHHHHHHHHHHcC-CCEEEEEecCc-cccccccccchhhhcccccc
Confidence            57899988  8999999997 79999999999999999999999987 56999999999 9999999999875422211 


Q ss_pred             --hhhhhHhhHHHHHHHHhcCCCcEEEEeeCC
Q 030574          146 --YENFGRLNVLDLQVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       146 --~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~  175 (175)
                        ........+++++.++.++|||+||+|||+
T Consensus        77 ~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~  108 (258)
T d2fw2a1          77 NTASLEMVDTIKNFVNTFIQFKKPIVVSVNGP  108 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred             cchhhHHHHHHHHHHHhhhccceeeeeecccc
Confidence              111223346788889999999999999996

>d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: AUH protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=6.8e-23  Score=164.33  Aligned_cols=97  Identities=25%  Similarity=0.362  Sum_probs=84.8

Q ss_pred             CCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEecCCCCcccCCCCCCccccCCccchhhhhHhhHHHH
Q 030574           78 GEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDL  157 (175)
Q Consensus        78 ~~~V~~ItLnrp~~~Nal~~~~~~eL~~al~~~~~d~~vkvvVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~  157 (175)
                      ++||++|+||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|+++||+|+|++.+.......... ....++++
T Consensus        13 ~~gI~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~f~~g~d~~~~~~~~~~~~~~-~~~~~~~~   91 (266)
T d1hzda_          13 NRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGP-FVSKIRAV   91 (266)
T ss_dssp             GTTEEEEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCHHHHHH-HHHHHHHH
T ss_pred             cCCEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCCcceEEEeccccccccccccccccccccchhhhh-hhhHHHHH
Confidence            57899999999999999999999999999999999999999999999877899999999887655443322 33346788


Q ss_pred             HHHHhcCCCcEEEEeeCC
Q 030574          158 QVQIRRLPKPVIAMVHLP  175 (175)
Q Consensus       158 ~~~i~~~~kPvIAaV~G~  175 (175)
                      +.+|.++|||+||+|||+
T Consensus        92 ~~~i~~~~kpvIaav~G~  109 (266)
T d1hzda_          92 INDIANLPVPTIAAIDGL  109 (266)
T ss_dssp             HHHHHTCSSCEEEEESEE
T ss_pred             HHHHhcCCcccccccccc
Confidence            899999999999999995

>d2csua2 c.23.4.1 (A:130-290) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=83.34  E-value=1.1  Score=31.07  Aligned_cols=23  Identities=17%  Similarity=0.120  Sum_probs=20.7

Q ss_pred             HHHHHHHhhcCCCceEEEEecCC
Q 030574          103 LIRAFNDARDDSSVGVIILTGKG  125 (175)
Q Consensus       103 L~~al~~~~~d~~vkvvVltG~g  125 (175)
                      +.+.++.+.+||++++|++.+.+
T Consensus        61 ~~d~l~~l~~D~~t~~i~l~~E~   83 (161)
T d2csua2          61 FAELMEYLADTEEDKAIALYIEG   83 (161)
T ss_dssp             HHHHHHHHTTCSSCCEEEEEESC
T ss_pred             HHHHHHHHhcCCCCcEEEEEecC
Confidence            56888899999999999999987