Citrus Sinensis ID: 030581

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-----
MAILAPASVSKDPLPSSSSALTPLRSSTQIFGPKFKFRQIGQTQLSLSTSFKKSSGFKLKGWRHSEGITQEFQVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCEGNYYFDELDPSILES
ccccccccccccccccccccccccccccccccccccccccccHHHcccHHHHHccccccccccccccccHHHHHHcHHHHHHHHccccHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccEEEEEEcccccccccccccccccEEEEEccccccccccccccccccccccccc
cccccccEcccccccccccccccccccccccccHHHHcEcccccccccHHHHHccccHHHccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHcccccccEEEEEEccccccHHHHcccccccEEEEEEHHHcccccccccccccccHHHHcc
mailapasvskdplpssssaltplrsstqifgpkfkfrqigqtqlslstsfkkssgfklkgwrhsegitqefqvdKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQnladgqapkFMVIAcadsrvcpsnilgfqpgeafIVRNvanmvppcegnyyfdeldpsiles
mailapasvskdplpssssaltplrSSTQIFGPKFKFRQIGQTQLSLSTSFKKSSGFKLKGWRHSEGITQEFQVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCEgnyyfdeldpsiles
MAILAPasvskdplpssssaltplrssTQIFGPKFKFRQIGQTQlslstsfkkssgfklkgWRHSEGITQEFQVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCEGNYYFDELDPSILES
*****************************IFGPKFKFRQIGQT************GFKLKGWRHSEGITQEFQVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCEGNYYFDEL*******
*****************************************************************************************FDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCEGNYYFDELDPSILES
********************LTPLRSSTQIFGPKFKFRQIGQTQLSLSTSFKKSSGFKLKGWRHSEGITQEFQVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCEGNYYFDELDPSILES
**********************PLRSSTQIFGPKFKFRQIGQTQLSLSTSF**S****************EF**D********ENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCEGNYYFDELDP*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAILAPASVSKDPLPSSSSALTPLRSSTQIFGPKFKFRQIGQTQLSLSTSFKKSSGFKLKGWRHSEGITQEFQVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCEGNYYFDELDPSILES
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query175 2.2.26 [Sep-21-2011]
P46510 330 Carbonic anhydrase OS=Fla N/A no 0.6 0.318 0.485 5e-22
P46511 330 Carbonic anhydrase OS=Fla N/A no 0.525 0.278 0.521 1e-21
P46512 330 Carbonic anhydrase 1 OS=F N/A no 0.525 0.278 0.521 1e-21
P46281 329 Carbonic anhydrase OS=Fla N/A no 0.525 0.279 0.521 2e-21
P17067 328 Carbonic anhydrase, chlor N/A no 0.422 0.225 0.594 1e-20
P27140 347 Carbonic anhydrase, chlor no no 0.405 0.204 0.591 2e-20
P42737 259 Carbonic anhydrase 2, chl no no 0.405 0.274 0.577 5e-20
P16016 319 Carbonic anhydrase, chlor N/A no 0.417 0.228 0.589 5e-20
P27141 321 Carbonic anhydrase, chlor N/A no 0.44 0.239 0.558 7e-20
P46513 190 Carbonic anhydrase 2 (Fra N/A no 0.268 0.247 0.765 4e-16
>sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2 Back     alignment and function desciption
 Score =  103 bits (257), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 51/105 (48%), Positives = 67/105 (63%)

Query: 60  KGWRHSEGITQEFQVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQ 119
           KG       T+  Q+     A + +   D  +++K  F+ FK +KF+ N   Y  LA GQ
Sbjct: 93  KGELEPVAATRIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQ 152

Query: 120 APKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCEGNYY 164
           +PKFMV AC+DSRVCPS++L FQPGEAF+VRNVANMVPP +   Y
Sbjct: 153 SPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKY 197
Reversible hydration of carbon dioxide.
Flaveria bidentis (taxid: 4224)
EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 1
>sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1 Back     alignment and function description
>sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1 Back     alignment and function description
>sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1 Back     alignment and function description
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1 Back     alignment and function description
>sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2 Back     alignment and function description
>sp|P42737|CAH2_ARATH Carbonic anhydrase 2, chloroplastic OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2 Back     alignment and function description
>sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2 Back     alignment and function description
>sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query175
359475658 300 PREDICTED: carbonic anhydrase 2, chlorop 0.76 0.443 0.607 1e-39
296087414 301 unnamed protein product [Vitis vinifera] 0.765 0.445 0.607 2e-39
356549520 301 PREDICTED: carbonic anhydrase, chloropla 0.874 0.508 0.509 2e-38
356554783 301 PREDICTED: carbonic anhydrase, chloropla 0.874 0.508 0.503 2e-38
388516167 308 unknown [Lotus japonicus] 0.885 0.503 0.5 4e-38
255645634 301 unknown [Glycine max] 0.874 0.508 0.496 9e-38
388502556 308 unknown [Lotus japonicus] 0.885 0.503 0.493 1e-37
255563296 313 carbonic anhydrase, putative [Ricinus co 0.897 0.501 0.517 4e-37
224140715256 predicted protein [Populus trichocarpa] 0.622 0.425 0.642 2e-34
297802642 301 carbonic anhydrase family protein [Arabi 0.817 0.475 0.525 3e-34
>gi|359475658|ref|XP_002263870.2| PREDICTED: carbonic anhydrase 2, chloroplastic-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  167 bits (423), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 82/135 (60%), Positives = 100/135 (74%), Gaps = 2/135 (1%)

Query: 23  PLRSSTQIFGPKFKFRQIGQTQLSLSTSFKKSSGFKLKGWRHSEGITQEFQVDKLETAAE 82
           P  + + IFG K K   I QT ++   S  +S   +LK  R S G+TQE   D+LE+ AE
Sbjct: 23  PSTTRSTIFGSKPKLSVIEQTHVTNLASLNQS--LRLKASRESPGLTQELTSDRLESIAE 80

Query: 83  VENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQ 142
           +EN  D FD++KHRFLSFKK K++ENLE +QNLA  QAPKFMVIACADSRVCPS ILGF+
Sbjct: 81  IENRYDVFDEVKHRFLSFKKHKYLENLECFQNLATAQAPKFMVIACADSRVCPSKILGFE 140

Query: 143 PGEAFIVRNVANMVP 157
           PGEAF+VRNVAN+VP
Sbjct: 141 PGEAFMVRNVANLVP 155

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296087414|emb|CBI34003.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356549520|ref|XP_003543141.1| PREDICTED: carbonic anhydrase, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356554783|ref|XP_003545722.1| PREDICTED: carbonic anhydrase, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|388516167|gb|AFK46145.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|255645634|gb|ACU23311.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|388502556|gb|AFK39344.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|255563296|ref|XP_002522651.1| carbonic anhydrase, putative [Ricinus communis] gi|223538127|gb|EEF39738.1| carbonic anhydrase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224140715|ref|XP_002323724.1| predicted protein [Populus trichocarpa] gi|222866726|gb|EEF03857.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297802642|ref|XP_002869205.1| carbonic anhydrase family protein [Arabidopsis lyrata subsp. lyrata] gi|297315041|gb|EFH45464.1| carbonic anhydrase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query175
TAIR|locus:2134218 302 BCA5 "beta carbonic anhydrase 0.514 0.298 0.621 5.7e-27
TAIR|locus:2196292 290 BCA6 "beta carbonic anhydrase 0.514 0.310 0.553 4.2e-24
TAIR|locus:2084198 347 CA1 "carbonic anhydrase 1" [Ar 0.468 0.236 0.530 5.7e-20
TAIR|locus:2185460 331 CA2 "carbonic anhydrase 2" [Ar 0.474 0.250 0.511 7.2e-20
TAIR|locus:2016109 280 BCA4 "beta carbonic anhydrase 0.405 0.253 0.577 2.5e-19
TAIR|locus:2034797 258 BCA3 "beta carbonic anhydrase 0.462 0.313 0.552 2.8e-18
TIGR_CMR|CBU_0139 206 CBU_0139 "carbonic anhydrase" 0.417 0.354 0.459 3.9e-12
TIGR_CMR|GSU_2307 211 GSU_2307 "carbonic anhydrase" 0.377 0.312 0.454 2.2e-11
TIGR_CMR|SPO_3715 216 SPO_3715 "carbonic anhydrase, 0.36 0.291 0.5 1.5e-10
TIGR_CMR|CJE_0288 211 CJE_0288 "carbonic anhydrase" 0.348 0.289 0.426 5.2e-10
TAIR|locus:2134218 BCA5 "beta carbonic anhydrase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 59/95 (62%), Positives = 73/95 (76%)

Query:    67 GITQEFQVDKLETAAEVENECDFFDKMKHRFLSFKKQKFM-ENLEHYQNLADGQAPKFMV 125
             G+TQE        A + +N  D FD MK RFL+FKK K++ ++ EHY+NLAD QAPKF+V
Sbjct:    63 GLTQEAN----GVAIDRQNNTDVFDDMKQRFLAFKKLKYIRDDFEHYKNLADAQAPKFLV 118

Query:   126 IACADSRVCPSNILGFQPGEAFIVRNVANMVPPCE 160
             IACADSRVCPS +LGFQPG+AF VRN+AN+VPP E
Sbjct:   119 IACADSRVCPSAVLGFQPGDAFTVRNIANLVPPYE 153
GO:0004089 "carbonate dehydratase activity" evidence=IEA;ISS
GO:0008270 "zinc ion binding" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0015976 "carbon utilization" evidence=IEA;ISS
GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA
TAIR|locus:2196292 BCA6 "beta carbonic anhydrase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084198 CA1 "carbonic anhydrase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2185460 CA2 "carbonic anhydrase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016109 BCA4 "beta carbonic anhydrase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034797 BCA3 "beta carbonic anhydrase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_0139 CBU_0139 "carbonic anhydrase" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_2307 GSU_2307 "carbonic anhydrase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_3715 SPO_3715 "carbonic anhydrase, putative" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|CJE_0288 CJE_0288 "carbonic anhydrase" [Campylobacter jejuni RM1221 (taxid:195099)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.2.1LOW CONFIDENCE prediction!
4th Layer4.2.1.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query175
PLN03006 301 PLN03006, PLN03006, carbonate dehydratase 1e-43
cd00884 190 cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) 2e-36
PLN02154 290 PLN02154, PLN02154, carbonic anhydrase 2e-29
PLN00416 258 PLN00416, PLN00416, carbonate dehydratase 1e-27
PLN03019 330 PLN03019, PLN03019, carbonic anhydrase 4e-24
PLN03014 347 PLN03014, PLN03014, carbonic anhydrase 6e-24
smart00947154 smart00947, Pro_CA, Carbonic anhydrase 7e-22
cd00382119 cd00382, beta_CA, Carbonic anhydrases (CA) are zin 1e-20
COG0288 207 COG0288, CynT, Carbonic anhydrase [Inorganic ion t 1e-20
cd00883 182 cd00883, beta_CA_cladeA, Carbonic anhydrases (CA) 7e-17
pfam00484149 pfam00484, Pro_CA, Carbonic anhydrase 1e-16
PRK10437 220 PRK10437, PRK10437, carbonic anhydrase; Provisiona 2e-10
cd03378154 cd03378, beta_CA_cladeC, Carbonic anhydrases (CA) 7e-10
cd03379142 cd03379, beta_CA_cladeD, Carbonic anhydrases (CA) 3e-04
PRK15219245 PRK15219, PRK15219, carbonic anhydrase; Provisiona 0.004
>gnl|CDD|178583 PLN03006, PLN03006, carbonate dehydratase Back     alignment and domain information 
 Score =  146 bits (369), Expect = 1e-43
 Identities = 79/154 (51%), Positives = 104/154 (67%), Gaps = 11/154 (7%)

Query: 8   SVSKDPLPSSSSALTPLRSSTQIFGPKFKFRQIGQTQLSLSTSFK-KSSGFKLKGWRHSE 66
           SVS DP   SS++L  L++   IFGP    +    TQL +  SF+ K++  ++     + 
Sbjct: 9   SVSHDPF--SSTSLLNLQTQA-IFGPNHSLKT---TQLRIPASFRRKATNLQVMASGKTP 62

Query: 67  GITQEFQVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVI 126
           G+TQE        A + +N  D FD MK RFL+FKK K+M++ EHY+NLAD QAPKF+VI
Sbjct: 63  GLTQEAN----GVAIDRQNNTDVFDDMKQRFLAFKKLKYMDDFEHYKNLADAQAPKFLVI 118

Query: 127 ACADSRVCPSNILGFQPGEAFIVRNVANMVPPCE 160
           ACADSRVCPS +LGFQPG+AF VRN+AN+VPP E
Sbjct: 119 ACADSRVCPSAVLGFQPGDAFTVRNIANLVPPYE 152

Length = 301
>gnl|CDD|238449 cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|215111 PLN02154, PLN02154, carbonic anhydrase Back     alignment and domain information
>gnl|CDD|177809 PLN00416, PLN00416, carbonate dehydratase Back     alignment and domain information
>gnl|CDD|166660 PLN03019, PLN03019, carbonic anhydrase Back     alignment and domain information
>gnl|CDD|178588 PLN03014, PLN03014, carbonic anhydrase Back     alignment and domain information
>gnl|CDD|214929 smart00947, Pro_CA, Carbonic anhydrase Back     alignment and domain information
>gnl|CDD|238224 cd00382, beta_CA, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|223365 COG0288, CynT, Carbonic anhydrase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|238448 cd00883, beta_CA_cladeA, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|215941 pfam00484, Pro_CA, Carbonic anhydrase Back     alignment and domain information
>gnl|CDD|182460 PRK10437, PRK10437, carbonic anhydrase; Provisional Back     alignment and domain information
>gnl|CDD|239473 cd03378, beta_CA_cladeC, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|239474 cd03379, beta_CA_cladeD, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|237927 PRK15219, PRK15219, carbonic anhydrase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 175
PLN03006 301 carbonate dehydratase 100.0
PLN03014 347 carbonic anhydrase 100.0
PLN03019 330 carbonic anhydrase 100.0
PLN00416 258 carbonate dehydratase 99.97
PRK15219 245 carbonic anhydrase; Provisional 99.9
PLN02154 290 carbonic anhydrase 99.9
COG0288 207 CynT Carbonic anhydrase [Inorganic ion transport a 99.89
cd00884 190 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-c 99.88
PRK10437 220 carbonic anhydrase; Provisional 99.88
cd00883 182 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-c 99.87
cd03378154 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-c 99.87
KOG1578 276 consensus Predicted carbonic anhydrase involved in 99.8
cd00382119 beta_CA Carbonic anhydrases (CA) are zinc-containi 99.65
cd03379142 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-c 99.56
PF00484153 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Ca 99.52
KOG1578 276 consensus Predicted carbonic anhydrase involved in 94.74
>PLN03006 carbonate dehydratase Back     alignment and domain information 
Probab=100.00  E-value=9e-40  Score=286.09  Aligned_cols=160  Identities=48%  Similarity=0.811  Sum_probs=135.6

Q ss_pred             CCCCCCCccccCCCCCCCCCCCCCCCcceeeCCCccchhhHHHHHHHHHHhhhc-ccccccccccchhhhhhhcccccch
Q 030581            1 MAILAPASVSKDPLPSSSSALTPLRSSTQIFGPKFKFRQIGQTQLSLSTSFKKS-SGFKLKGWRHSEGITQEFQVDKLET   79 (175)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~l~~~A~~~~~~~t~eL~~~~~~~   79 (175)
                      +|+|+++|||+|||+|+|+.   ++..+.++++..+   ...|++||...+|++ .++..+|++|+++||+||+....+ 
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~-   74 (301)
T PLN03006          2 AATPTHFSVSHDPFSSTSLL---NLQTQAIFGPNHS---LKTTQLRIPASFRRKATNLQVMASGKTPGLTQEANGVAID-   74 (301)
T ss_pred             CCCCCCcccccCCcchhhhh---ccCcceeecCCcc---cceeEecccccccccccchhhhhhhchHHHHHHHhhccCC-
Confidence            47899999999999999996   2222445555543   444669998888775 488899999999999999865422 


Q ss_pred             hhccCCHHHHHHHHHHHHHHhhhhhcccChHHHHhhhcCCCCceEEEeecCCCCCcccccCCCCCceEEEeccCCcCCCC
Q 030581           80 AAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPC  159 (175)
Q Consensus        80 ~~~~~~~~~~l~~Ll~GN~rF~~~~~~~~~~~~~~la~gQ~P~alVItCSDSRV~Pe~Ifg~~pGDlFVVRNaGNvV~p~  159 (175)
                         ..++.+++++|++||.+|+..++.+++++|+.+++||+|+++||+||||||+|+.|||++|||+||||||||+|+|+
T Consensus        75 ---~~~~~~~~~~L~~rf~~f~~~~~~~~~~~~~~La~GQ~P~~lvI~CsDSRV~Pe~Ifd~~pGDlFVVRNaGNiVpp~  151 (301)
T PLN03006         75 ---RQNNTDVFDDMKQRFLAFKKLKYMDDFEHYKNLADAQAPKFLVIACADSRVCPSAVLGFQPGDAFTVRNIANLVPPY  151 (301)
T ss_pred             ---CCCcccHHHHHHHHHHhchhhccccCHHHHHHhccCCCCCEEEEEeccCCCCHHHHhCCCCCCEEEEeccccccCCc
Confidence               23478999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccCCccc
Q 030581          160 EGNYYFDELDPSI  172 (175)
Q Consensus       160 ~~~~~~~~~~~~~  172 (175)
                      +.+.  ||+.++|
T Consensus       152 d~~~--~~~~aSL  162 (301)
T PLN03006        152 ESGP--TETKAAL  162 (301)
T ss_pred             cccc--cchhhhH
Confidence            8743  6666654

>PLN03014 carbonic anhydrase Back     alignment and domain information
>PLN03019 carbonic anhydrase Back     alignment and domain information
>PLN00416 carbonate dehydratase Back     alignment and domain information
>PRK15219 carbonic anhydrase; Provisional Back     alignment and domain information
>PLN02154 carbonic anhydrase Back     alignment and domain information
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>PRK10437 carbonic anhydrase; Provisional Back     alignment and domain information
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4 Back     alignment and domain information
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query175
1ekj_A 221 The X-Ray Crystallographic Structure Of Beta Carbon 5e-21
3e3g_A 229 H. Influenzae Beta-Carbonic Anhydrase, Variant G41a 3e-09
2a8c_A 229 Haemophilus Influenzae Beta-Carbonic Anhydrase Leng 1e-08
3e24_A 229 H. Influenzae Beta-Carbonic Anhydrase, Variant W39f 1e-08
3e28_A 229 H. Influenzae Beta-carbonic Anhydrase, Variant Y181 1e-08
3mf3_A 221 Cobalt(Ii)-Substituted Haemophilus Influenzae B-Car 1e-08
1i6o_A 220 Crystal Structure Of E. Coli Beta Carbonic Anhydras 3e-08
1i6p_A 220 Crystal Structure Of E. Coli Beta Carbonic Anhydras 3e-08
3e2x_A 229 H. Influenzae Beta-Carbonic Anhydrase, Variant V47a 3e-08
3e1v_A 229 H. Influenzae Beta-Carbonic Anhydrase, Variant D44n 4e-08
3qy1_A 223 1.54a Resolution Crystal Structure Of A Beta-Carbon 4e-08
3ucj_A 227 Coccomyxa Beta-Carbonic Anhydrase In Complex With A 6e-08
1ddz_A 496 X-Ray Structure Of A Beta-Carbonic Anhydrase From T 3e-07
2w3n_A 239 Structure And Inhibition Of The Co2-Sensing Carboni 1e-06
2w3q_A 243 Structure And Inhibition Of The Co2-Sensing Carboni 2e-06
2a5v_A 213 Crystal Structure Of M. Tuberculosis Beta Carbonic 3e-05
1ym3_A 215 Crystal Structure Of Carbonic Anhydrase Rv3588c Fro 3e-05
3eyx_A 216 Crystal Structure Of Carbonic Anhydrase Nce103 From 1e-04
>pdb|1EKJ|A Chain A, The X-Ray Crystallographic Structure Of Beta Carbonic Anhydrase From The C3 Dicot Pisum Sativum Length = 221 Back     alignment and structure 
Iteration: 1

 Score = 97.1 bits (240), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 43/68 (63%), Positives = 55/68 (80%)
Query: 91  DKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVR 150
           +++K  FL FKK+K+ +N   Y  LA GQ+P FMV AC+DSRVCPS++L FQPGEAF+VR
Sbjct: 15  ERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVR 74
Query: 151 NVANMVPP 158
           NVAN+VPP
Sbjct: 75  NVANLVPP 82
>pdb|3E3G|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a Length = 229 Back     alignment and structure
>pdb|2A8C|A Chain A, Haemophilus Influenzae Beta-Carbonic Anhydrase Length = 229 Back     alignment and structure
>pdb|3E24|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant W39f Length = 229 Back     alignment and structure
>pdb|3E28|A Chain A, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f Length = 229 Back     alignment and structure
>pdb|3MF3|A Chain A, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic Anhydrase Length = 221 Back     alignment and structure
>pdb|1I6O|A Chain A, Crystal Structure Of E. Coli Beta Carbonic Anhydrase (Ecca) Length = 220 Back     alignment and structure
>pdb|1I6P|A Chain A, Crystal Structure Of E. Coli Beta Carbonic Anhydrase (Ecca) Length = 220 Back     alignment and structure
>pdb|3E2X|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant V47a Length = 229 Back     alignment and structure
>pdb|3E1V|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant D44n Length = 229 Back     alignment and structure
>pdb|3QY1|A Chain A, 1.54a Resolution Crystal Structure Of A Beta-Carbonic Anhydrase From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 Length = 223 Back     alignment and structure
>pdb|3UCJ|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With Acetazolamide Length = 227 Back     alignment and structure
>pdb|1DDZ|A Chain A, X-Ray Structure Of A Beta-Carbonic Anhydrase From The Red Alga, Porphyridium Purpureum R-1 Length = 496 Back     alignment and structure
>pdb|2W3N|A Chain A, Structure And Inhibition Of The Co2-Sensing Carbonic Anhydrase Can2 From The Pathogenic Fungus Cryptococcus Neoformans Length = 239 Back     alignment and structure
>pdb|2W3Q|A Chain A, Structure And Inhibition Of The Co2-Sensing Carbonic Anhydrase Can2 From The Pathogenic Fungus Cryptococcus Neoformans Length = 243 Back     alignment and structure
>pdb|2A5V|A Chain A, Crystal Structure Of M. Tuberculosis Beta Carbonic Anhydrase, Rv3588c, Tetrameric Form Length = 213 Back     alignment and structure
>pdb|1YM3|A Chain A, Crystal Structure Of Carbonic Anhydrase Rv3588c From Mycobacterium Tuberculosis Length = 215 Back     alignment and structure
>pdb|3EYX|A Chain A, Crystal Structure Of Carbonic Anhydrase Nce103 From Saccharomyces Cerevisiae Length = 216 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query175
1ekj_A 221 Beta-carbonic anhydrase; rossman fold domain, stra 9e-37
3e3i_A 229 Carbonic anhydrase 2, beta carbonic anhydrase; all 1e-30
3qy1_A 223 Carbonic anhydrase; structural genomics, center fo 1e-30
3ucj_A 227 Carbonic anhydrase; alpha/beta, strand exchange, l 3e-30
2w3q_A 243 Carbonic anhydrase 2; lyase, inhibition, sulfonami 3e-30
1ddz_A 496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 6e-30
1ddz_A 496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 2e-28
3eyx_A 216 Carbonic anhydrase; rossmann fold, cytoplasm, lyas 9e-27
1ym3_A 215 Carbonic anhydrase (carbonate dehydratase) (carbo 3e-25
3teo_A 204 Carbon disulfide hydrolase; beta carbonic anhydras 9e-17
1g5c_A170 Beta-carbonic anhydrase; zinc, hepes, lyase; HET: 8e-16
3las_A166 Putative carbonic anhydrase; zinc binding, LYAS; H 2e-15
1ylk_A172 Hypothetical protein RV1284/MT1322; homodimer, alp 2e-15
>1ekj_A Beta-carbonic anhydrase; rossman fold domain, strand exchange, lyase; HET: CIT; 1.93A {Pisum sativum} SCOP: c.53.2.1 Length = 221 Back     alignment and structure
 Score =  125 bits (316), Expect = 9e-37
 Identities = 45/96 (46%), Positives = 66/96 (68%), Gaps = 2/96 (2%)

Query: 79  TAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNI 138
           ++++   + +  +++K  FL FKK+K+ +N   Y  LA GQ+P FMV AC+DSRVCPS++
Sbjct: 3   SSSDGIPKSEASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHV 62

Query: 139 LGFQPGEAFIVRNVANMVPPCEGNYYFDELDPSILE 174
           L FQPGEAF+VRNVAN+VPP +   Y      + +E
Sbjct: 63  LDFQPGEAFVVRNVANLVPPYDQAKYAGTG--AAIE 96
>3e3i_A Carbonic anhydrase 2, beta carbonic anhydrase; allosteric site mutant, lyase, META; 2.00A {Haemophilus influenzae} PDB: 3e3g_A 2a8d_A 2a8c_A 3e3f_A 3e31_A 3e2x_A 3e2a_A 3e28_A 3e2w_A 3e1w_A 3e1v_A 3e24_A 3mf3_A Length = 229 Back     alignment and structure
>3qy1_A Carbonic anhydrase; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 1.54A {Salmonella enterica subsp} PDB: 1i6p_A 1i6o_A 1t75_A 2esf_A Length = 223 Back     alignment and structure
>3ucj_A Carbonic anhydrase; alpha/beta, strand exchange, lyase-lyase inhibitor complex; HET: AZM; 1.85A {Coccomyxa SP} PDB: 3uck_A 3ucm_A 3ucn_A 3uco_A Length = 227 Back     alignment and structure
>2w3q_A Carbonic anhydrase 2; lyase, inhibition, sulfonamide; 1.34A {Cryptococcus neoformans} PDB: 2w3n_A Length = 243 Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Length = 496 Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Length = 496 Back     alignment and structure
>3eyx_A Carbonic anhydrase; rossmann fold, cytoplasm, lyase, metal-binding, nucleus, zinc; 2.04A {Saccharomyces cerevisiae} Length = 216 Back     alignment and structure
>1ym3_A Carbonic anhydrase (carbonate dehydratase) (carbo dehydratase); Zn protein, structural proteomics in europe, spine, structur genomics; 1.75A {Mycobacterium tuberculosis} PDB: 2a5v_A Length = 215 Back     alignment and structure
>3teo_A Carbon disulfide hydrolase; beta carbonic anhydrase fold, carbon disulfide hydrolysis; HET: PE3; 2.40A {Acidianus SP} PDB: 3ten_A* Length = 204 Back     alignment and structure
>1g5c_A Beta-carbonic anhydrase; zinc, hepes, lyase; HET: EPE; 2.10A {Methanothermobacterthermautotrophicus} SCOP: c.53.2.1 Length = 170 Back     alignment and structure
>3las_A Putative carbonic anhydrase; zinc binding, LYAS; HET: GOL; 1.40A {Streptococcus mutans} Length = 166 Back     alignment and structure
>1ylk_A Hypothetical protein RV1284/MT1322; homodimer, alpha/beta-fold, structural proteomics in spine, structural genomics, unknown function; 2.00A {Mycobacterium tuberculosis} Length = 172 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query175
1ekj_A 221 Beta-carbonic anhydrase; rossman fold domain, stra 99.94
1ym3_A 215 Carbonic anhydrase (carbonate dehydratase) (carbo 99.92
2w3q_A 243 Carbonic anhydrase 2; lyase, inhibition, sulfonami 99.92
3qy1_A 223 Carbonic anhydrase; structural genomics, center fo 99.91
1ddz_A 496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 99.9
3e3i_A 229 Carbonic anhydrase 2, beta carbonic anhydrase; all 99.89
3ucj_A 227 Carbonic anhydrase; alpha/beta, strand exchange, l 99.89
1ylk_A172 Hypothetical protein RV1284/MT1322; homodimer, alp 99.88
3eyx_A 216 Carbonic anhydrase; rossmann fold, cytoplasm, lyas 99.87
1ddz_A 496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 99.87
3las_A166 Putative carbonic anhydrase; zinc binding, LYAS; H 99.81
1g5c_A170 Beta-carbonic anhydrase; zinc, hepes, lyase; HET: 99.8
3teo_A 204 Carbon disulfide hydrolase; beta carbonic anhydras 99.75
>1ekj_A Beta-carbonic anhydrase; rossman fold domain, strand exchange, lyase; HET: CIT; 1.93A {Pisum sativum} SCOP: c.53.2.1 Back     alignment and structure
Probab=99.94  E-value=1.1e-27  Score=199.17  Aligned_cols=87  Identities=49%  Similarity=0.882  Sum_probs=75.7

Q ss_pred             CCHHHHHHHHHHHHHHhhhhhcccChHHHHhhhcCCCCceEEEeecCCCCCcccccCCCCCceEEEeccCCcCCCCCCCC
Q 030581           84 ENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCEGNY  163 (175)
Q Consensus        84 ~~~~~~l~~Ll~GN~rF~~~~~~~~~~~~~~la~gQ~P~alVItCSDSRV~Pe~Ifg~~pGDlFVVRNaGNvV~p~~~~~  163 (175)
                      .+|++++++|++||++|+++++.+++++|+.|+.+|+|+++||+||||||+|+.|||++|||+||||||||+|++++.. 
T Consensus         8 ~~p~~~l~~L~~gN~~f~~~~~~~~~~~~~~La~gQ~P~~lvi~CsDSRV~pe~i~~~~pGdlFVvRNaGN~V~~~d~~-   86 (221)
T 1ekj_A            8 IPKSEASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQA-   86 (221)
T ss_dssp             ----CHHHHHHHHHHHHHHHTTTSCHHHHHHHTTCCCCSEEEEEECCGGGCHHHHSCCCTTSEEEEEEGGGCCCCSCTT-
T ss_pred             CCHHHHHHHHHHHHHHHHhcCcccCHHHHHhhccCCCCcEEEEEeCCCCCCHHHHhCCCCCcEEEEeccCcccCccccc-
Confidence            5688999999999999999988889999999999999999999999999999999999999999999999999998865 


Q ss_pred             ccccCCcc
Q 030581          164 YFDELDPS  171 (175)
Q Consensus       164 ~~~~~~~~  171 (175)
                      .+|++..+
T Consensus        87 ~~~~~~as   94 (221)
T 1ekj_A           87 KYAGTGAA   94 (221)
T ss_dssp             TCHHHHHH
T ss_pred             ccchhHHH
Confidence            34444443
>1ym3_A Carbonic anhydrase (carbonate dehydratase) (carbo dehydratase); Zn protein, structural proteomics in europe, spine, structur genomics; 1.75A {Mycobacterium tuberculosis} PDB: 2a5v_A Back     alignment and structure
>2w3q_A Carbonic anhydrase 2; lyase, inhibition, sulfonamide; 1.34A {Cryptococcus neoformans} PDB: 2w3n_A Back     alignment and structure
>3qy1_A Carbonic anhydrase; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 1.54A {Salmonella enterica subsp} SCOP: c.53.2.1 PDB: 1i6p_A 1i6o_A 1t75_A 2esf_A Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Back     alignment and structure
>3e3i_A Carbonic anhydrase 2, beta carbonic anhydrase; allosteric site mutant, lyase, META; 2.00A {Haemophilus influenzae} SCOP: c.53.2.1 PDB: 3e3g_A 2a8d_A 2a8c_A 3e3f_A 3e31_A 3e2x_A 3e2a_A 3e28_A 3e2w_A 3e1w_A 3e1v_A 3e24_A 3mf3_A Back     alignment and structure
>3ucj_A Carbonic anhydrase; alpha/beta, strand exchange, lyase-lyase inhibitor complex; HET: AZM; 1.85A {Coccomyxa SP} PDB: 3uck_A 3ucm_A 3ucn_A 3uco_A Back     alignment and structure
>1ylk_A Hypothetical protein RV1284/MT1322; homodimer, alpha/beta-fold, structural proteomics in spine, structural genomics, unknown function; 2.00A {Mycobacterium tuberculosis} Back     alignment and structure
>3eyx_A Carbonic anhydrase; rossmann fold, cytoplasm, lyase, metal-binding, nucleus, zinc; 2.04A {Saccharomyces cerevisiae} Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Back     alignment and structure
>3las_A Putative carbonic anhydrase; zinc binding, LYAS; HET: GOL; 1.40A {Streptococcus mutans} SCOP: c.53.2.0 Back     alignment and structure
>1g5c_A Beta-carbonic anhydrase; zinc, hepes, lyase; HET: EPE; 2.10A {Methanothermobacterthermautotrophicus} SCOP: c.53.2.1 Back     alignment and structure
>3teo_A Carbon disulfide hydrolase; beta carbonic anhydrase fold, carbon disulfide hydrolysis; HET: PE3; 2.40A {Acidianus SP} PDB: 3ten_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 175
d1ekja_ 210 c.53.2.1 (A:) beta-carbonic anhydrase {Pea (Pisum 7e-28
d1i6pa_ 214 c.53.2.1 (A:) beta-carbonic anhydrase {Escherichia 4e-24
d1ddza2 239 c.53.2.1 (A:326-564) beta-carbonic anhydrase {Red 2e-23
d1ddza1 242 c.53.2.1 (A:84-325) beta-carbonic anhydrase {Red a 2e-21
d1g5ca_169 c.53.2.1 (A:) beta-carbonic anhydrase {Archaeon Me 1e-13
>d1ekja_ c.53.2.1 (A:) beta-carbonic anhydrase {Pea (Pisum sativum) [TaxId: 3888]} Length = 210 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Resolvase-like
superfamily: beta-carbonic anhydrase, cab
family: beta-carbonic anhydrase, cab
domain: beta-carbonic anhydrase
species: Pea (Pisum sativum) [TaxId: 3888]

 Score =  101 bits (252), Expect = 7e-28
 Identities = 44/79 (55%), Positives = 57/79 (72%)

Query: 90  FDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIV 149
            +++K  FL FKK+K+ +N   Y  LA GQ+P FMV AC+DSRVCPS++L FQPGEAF+V
Sbjct: 3   SERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVV 62

Query: 150 RNVANMVPPCEGNYYFDEL 168
           RNVAN+VPP +   Y    
Sbjct: 63  RNVANLVPPYDQAKYAGTG 81
>d1i6pa_ c.53.2.1 (A:) beta-carbonic anhydrase {Escherichia coli [TaxId: 562]} Length = 214 Back     information, alignment and structure
>d1ddza2 c.53.2.1 (A:326-564) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Length = 239 Back     information, alignment and structure
>d1ddza1 c.53.2.1 (A:84-325) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Length = 242 Back     information, alignment and structure
>d1g5ca_ c.53.2.1 (A:) beta-carbonic anhydrase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Length = 169 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query175
d1ddza2 239 beta-carbonic anhydrase {Red alga (Porphyridium pu 99.95
d1ekja_ 210 beta-carbonic anhydrase {Pea (Pisum sativum) [TaxI 99.93
d1i6pa_ 214 beta-carbonic anhydrase {Escherichia coli [TaxId: 99.92
d1ddza1 242 beta-carbonic anhydrase {Red alga (Porphyridium pu 99.91
d1g5ca_169 beta-carbonic anhydrase {Archaeon Methanobacterium 99.79
>d1ddza2 c.53.2.1 (A:326-564) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Resolvase-like
superfamily: beta-carbonic anhydrase, cab
family: beta-carbonic anhydrase, cab
domain: beta-carbonic anhydrase
species: Red alga (Porphyridium purpureum) [TaxId: 35688]

Probab=99.95  E-value=2.8e-29  Score=209.06  Aligned_cols=106  Identities=23%  Similarity=0.317  Sum_probs=95.3

Q ss_pred             HHhhhcccccccccccchhhhhhhcccccchhhccCCHHHHHHHHHHHHHHhhhhhcccChHHHHhhhcCCCCceEEEee
Q 030581           49 TSFKKSSGFKLKGWRHSEGITQEFQVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIAC  128 (175)
Q Consensus        49 ~~~~~~~~l~~~A~~~~~~~t~eL~~~~~~~~~~~~~~~~~l~~Ll~GN~rF~~~~~~~~~~~~~~la~gQ~P~alVItC  128 (175)
                      .+++-+++++..+.++++.+|+++.....      ....+.+++|++||++|+...+.++|++|+++++||+|+++||+|
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~n~~~~~~~~~~~p~~f~~la~gQ~P~~~vi~C   78 (239)
T d1ddza2           5 PLVQVTKGGESELDSTMEKLTAELVQQTP------GKLKEGANRVFVNNENWRQKMLKQDPQFFSNLAHTQTPEILWIGC   78 (239)
T ss_dssp             CCCCSSSSCCCHHHHHHHHHHHHHHTSCT------TCCCCCSSHHHHHHHHHHHHHHHHCTTHHHHHTTCCCCSEEEEEE
T ss_pred             CcceecccchhhHHhhhHhhhhhhhccch------hhHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHhcCCCCCeEEEee
Confidence            46777889999999999999999976431      223357899999999999998889999999999999999999999


Q ss_pred             cCCCCCcccccCCCCCceEEEeccCCcCCCCC
Q 030581          129 ADSRVCPSNILGFQPGEAFIVRNVANMVPPCE  160 (175)
Q Consensus       129 SDSRV~Pe~Ifg~~pGDlFVVRNaGNvV~p~~  160 (175)
                      |||||+|+.|||++|||+||+||+||+|++++
T Consensus        79 sDSRv~pe~if~~~~GdlFVvRNaGN~v~~~d  110 (239)
T d1ddza2          79 ADSRVPANQIINLPAGEVFVHRNIANQCIHSD  110 (239)
T ss_dssp             TTCSSCHHHHTTCCTTSEEEEEETTCCCCTTC
T ss_pred             ecCCCCHHHHcCCCCCceEEEeeecCcCCCcc
Confidence            99999999999999999999999999999875
>d1ekja_ c.53.2.1 (A:) beta-carbonic anhydrase {Pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1i6pa_ c.53.2.1 (A:) beta-carbonic anhydrase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ddza1 c.53.2.1 (A:84-325) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Back     information, alignment and structure
>d1g5ca_ c.53.2.1 (A:) beta-carbonic anhydrase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure