Citrus Sinensis ID: 030602

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170----
Protein Sequence
MVVTLQTLILTPRPSKMLSSWHRNSHFRASGSLRFSPFVTFSPGRSISRPIRACRPSDQDFASSKGLNWAKPLLKIAADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLDWLYLAACQQHYQVEWHLPILLGGILHLLLQ
Secondary Structure (PSIPRED)
cccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHccccccccccccccccEEEEEEEEcccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cEEEEEEEEEccccccccccccccccccEcccEEEccEEEccccccccccEEcccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccHHHHHccccHHcHEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MVVTLQTliltprpskmlsswhrnshfrasgslrfspfvtfspgrsisrpiracrpsdqdfasskglnwakPLLKIAADNFLPLALIGGvafgfanpslgcladkyqlskfsTFAIFIVSGLtlrsgeigaaaeawpvgIFGLDWLYLAACQQHYQVEWHLPILLGGILHLLLQ
Flexible Loop (DISEMBL)
mvvtlqtliltprpskmlssWHRNSHFrasgslrfspFVTFspgrsisrpiracRPSDQDFASSKGLNWAKPLLKIAADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLDWLYLAACQQHYQVEWHLPILLGGILHLLLQ
Low Complexity Region (SEG)
MVVTLQTLILTPRPSKMLSSWHRNSHFRASGSLRFSPFVTFSPGRSISRPIRACRPSDQDFASSKGLNWAKPLLKIAADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLDWLYLAACQQHYQVEWhlpillggilhlllQ
Disordered region (IsUnstruct)
******TLIL**********************LRFSPFVTF***********************KGLNWAKPLLKIAADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLDWLYLAACQQHYQVEWHLPILLGGILHLLL*
Disordered Region (DISOPRED)
******T*ILT****************RASGSLRFSPFVT********************************LLKIAADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLDWLYLAACQQHYQVEWHLPILLGGILHLLLQ
Disordered Region (DISEMBL)
MVVTLQTLILTPRPSKMLSSWHRNSHFRASGSLRFSPFVTFSPGRSISRPIRACRPSDQDFASSKGLNWAKPLLKIAADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLDWLYLAACQQHYQVEWHLPILLGGILHLLLQ
Disordered Region (DISPRO)
MVVTLQTLILTPRPSKMLSSWHRNSHFRASGSLRFSPFVTFSPGRSISRPIRACRPSDQDFASSKGLNWAKPLLKIAADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLDWLYLAACQQHYQVEWHLPILLGGILHLLLQ
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVVTLQTLILTPRPSKMLSSWHRNSHFRASGSLRFSPFVTFSPGRSISRPIRACRPSDQDFASSKGLNWAKPLLKIAADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLDWLYLAACQQHYQVEWHLPILLGGILHLLLQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	174	2.2.26 [Sep-21-2011]
F4IZC4	436	Probable sodium/metabolit	yes	no	0.568	0.227	0.492	8e-26
Q6ESG1	423	Probable sodium/metabolit	yes	no	0.413	0.170	0.638	1e-20
B8AJ09	423	Probable sodium/metabolit	N/A	no	0.413	0.170	0.638	1e-20

>sp|F4IZC4|BASS4_ARATH Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Arabidopsis thaliana GN=BASS4 PE=3 SV=1

 Score =  116 bits (290), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 65/132 (49%), Positives = 79/132 (59%), Gaps = 33/132 (25%)

Query: 45  RSISRPIRACRPSDQ-------DF--------------------------ASSKGLNWAK 71
           R ISR IRAC+PSD+       DF                          AS++ L + K
Sbjct: 40  RWISRSIRACQPSDKVSGQFPFDFMYSSMLIPSSCGEWNRIHLGGDGGISASAQRLYFGK 99

Query: 72  PLLKIAADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGA 131
            LL  A+DNFLPLAL+ GV  GFANP+LGCLADKY  +K ST  IFI+SGLTLR+  IGA
Sbjct: 100 ELLSFASDNFLPLALVSGVGLGFANPTLGCLADKYSFTKISTCGIFIISGLTLRTEAIGA 159

Query: 132 AAEAWPVGIFGL 143
           A + WP+G+FGL
Sbjct: 160 AVKGWPLGLFGL 171

May function as sodium-coupled metabolite transporter across the chloroplast envelope.
Arabidopsis thaliana (taxid: 3702)

>sp|Q6ESG1|BASS4_ORYSJ Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Oryza sativa subsp. japonica GN=BASS4 PE=3 SV=1

 Score = 99.4 bits (246), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/72 (63%), Positives = 56/72 (77%)

Query: 77  AADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAW 136
           A  NFLPLALI G+A    +P+LGCLA KY LSK+STF IF++SGLTLR+ E+GAA EAW
Sbjct: 92  ARSNFLPLALIAGIALALMDPTLGCLAHKYSLSKYSTFGIFLISGLTLRTKELGAALEAW 151

Query: 137 PVGIFGLDWLYL 148
           P G+FGL  + L
Sbjct: 152 PAGLFGLASILL 163

May function as sodium-coupled metabolite transporter across the chloroplast envelope.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|B8AJ09|BASS4_ORYSI Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Oryza sativa subsp. indica GN=BASS4 PE=3 SV=1

 Score = 99.4 bits (246), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/72 (63%), Positives = 56/72 (77%)

Query: 77  AADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAW 136
           A  NFLPLALI G+A    +P+LGCLA KY LSK+STF IF++SGLTLR+ E+GAA EAW
Sbjct: 92  ARSNFLPLALIAGIALALMDPTLGCLAHKYSLSKYSTFGIFLISGLTLRTKELGAALEAW 151

Query: 137 PVGIFGLDWLYL 148
           P G+FGL  + L
Sbjct: 152 PAGLFGLASILL 163

May function as sodium-coupled metabolite transporter across the chloroplast envelope.

Oryza sativa subsp. indica (taxid: 39946)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	174
296087978	448	unnamed protein product [Vitis vinifera]	0.850	0.330	0.528	2e-30
225464144	419	PREDICTED: sodium/bile acid cotransporte	0.850	0.353	0.528	2e-30
255568038	423	bile acid:sodium symporter, putative [Ri	0.793	0.326	0.503	3e-28
7572914	341	putative protein [Arabidopsis thaliana]	0.597	0.304	0.581	1e-26
449468358	428	PREDICTED: probable sodium/metabolite co	0.712	0.289	0.485	8e-25
224100629	264	predicted protein [Populus trichocarpa]	0.419	0.276	0.767	3e-24
356534671	426	PREDICTED: sodium/bile acid cotransporte	0.729	0.298	0.455	3e-24
42565967	436	Sodium bile acid symporter family protei	0.568	0.227	0.492	4e-24
305682289	429	putative plastid localized membrane prot	0.488	0.198	0.682	2e-23
297820376	420	bile acid:sodium symporter [Arabidopsis	0.597	0.247	0.487	4e-23

>gi|296087978|emb|CBI35261.3| unnamed protein product [Vitis vinifera]

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/157 (52%), Positives = 96/157 (61%), Gaps = 9/157 (5%)

Query: 1   MVVTLQTLILTPRPSKML---SSWHRNSHFRASGSLRFSPFVTFSPGRSISRPIRACRPS 57
           M   +QTLIL P   K L   +    N+      + + S  +      S S PI A + S
Sbjct: 1   MAAIIQTLILRPPHPKTLPHPTPITSNAIRFCISTHKCSLLLRKPHSVSKSFPITAAQHS 60

Query: 58  ------DQDFASSKGLNWAKPLLKIAADNFLPLALIGGVAFGFANPSLGCLADKYQLSKF 111
                  Q  +S K L WAKPLL   ADNFLPLAL+ GVA G ANP+LGCLAD+Y LSK 
Sbjct: 61  AQGDDASQAASSGKALIWAKPLLSFVADNFLPLALVSGVALGLANPTLGCLADRYSLSKV 120

Query: 112 STFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLDWLYL 148
           STF IFI+SGL LRSGEIGAAAEAWPVGIFGL  + L
Sbjct: 121 STFGIFIISGLMLRSGEIGAAAEAWPVGIFGLGSILL 157

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464144|ref|XP_002266805.1| PREDICTED: sodium/bile acid cotransporter 7-like [Vitis vinifera]

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/157 (52%), Positives = 96/157 (61%), Gaps = 9/157 (5%)

Query: 1   MVVTLQTLILTPRPSKML---SSWHRNSHFRASGSLRFSPFVTFSPGRSISRPIRACRPS 57
           M   +QTLIL P   K L   +    N+      + + S  +      S S PI A + S
Sbjct: 1   MAAIIQTLILRPPHPKTLPHPTPITSNAIRFCISTHKCSLLLRKPHSVSKSFPITAAQHS 60

Query: 58  ------DQDFASSKGLNWAKPLLKIAADNFLPLALIGGVAFGFANPSLGCLADKYQLSKF 111
                  Q  +S K L WAKPLL   ADNFLPLAL+ GVA G ANP+LGCLAD+Y LSK 
Sbjct: 61  AQGDDASQAASSGKALIWAKPLLSFVADNFLPLALVSGVALGLANPTLGCLADRYSLSKV 120

Query: 112 STFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLDWLYL 148
           STF IFI+SGL LRSGEIGAAAEAWPVGIFGL  + L
Sbjct: 121 STFGIFIISGLMLRSGEIGAAAEAWPVGIFGLGSILL 157

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255568038|ref|XP_002524996.1| bile acid:sodium symporter, putative [Ricinus communis] gi|223535740|gb|EEF37403.1| bile acid:sodium symporter, putative [Ricinus communis]

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/147 (50%), Positives = 95/147 (64%), Gaps = 9/147 (6%)

Query: 1   MVVTLQTLILTPRPSKMLSSWHRNSHFRASGSLRFSPFVTFSPGRSISRPIR--ACRPSD 58
           M   +Q+LIL+PR  +  S   R+ +FR+      +P+ +    R +  PI+  AC+  D
Sbjct: 1   MAGIVQSLILSPRSLQPPSIQQRHPNFRSI----CNPY-SLKRTRCVPSPIKIKACQQPD 55

Query: 59  QDFASSKGLN--WAKPLLKIAADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAI 116
           Q  +   GL   W++PL     +NFLP+ALIGGV  G ANPSLGCLADK  LSK STF I
Sbjct: 56  QGDSKVSGLANVWSQPLFSFVENNFLPMALIGGVVVGLANPSLGCLADKCYLSKVSTFGI 115

Query: 117 FIVSGLTLRSGEIGAAAEAWPVGIFGL 143
           F +SGLTLR+GEIGAA EAW VG+FGL
Sbjct: 116 FFISGLTLRNGEIGAALEAWLVGVFGL 142

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|7572914|emb|CAB87415.1| putative protein [Arabidopsis thaliana]

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/110 (58%), Positives = 79/110 (71%), Gaps = 6/110 (5%)

Query: 45  RSISRPIRACRPSDQ------DFASSKGLNWAKPLLKIAADNFLPLALIGGVAFGFANPS 98
           R ISR IRAC+PSD+        AS++ L + K LL  A+DNFLPLAL+ GV  GFANP+
Sbjct: 40  RWISRSIRACQPSDKLGGDGGISASAQRLYFGKELLSFASDNFLPLALVSGVGLGFANPT 99

Query: 99  LGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLDWLYL 148
           LGCLADKY  +K ST  IFI+SGLTLR+  IGAA + WP+G+FGL  + L
Sbjct: 100 LGCLADKYSFTKISTCGIFIISGLTLRTEAIGAAVKGWPLGLFGLISILL 149

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449468358|ref|XP_004151888.1| PREDICTED: probable sodium/metabolite cotransporter BASS4, chloroplastic-like [Cucumis sativus] gi|449521070|ref|XP_004167554.1| PREDICTED: probable sodium/metabolite cotransporter BASS4, chloroplastic-like [Cucumis sativus]

 Score =  118 bits (296), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 66/136 (48%), Positives = 85/136 (62%), Gaps = 12/136 (8%)

Query: 25  SHFRASGSLRFSPFVTFSPGRSISRPIRAC-RPSDQD-----------FASSKGLNWAKP 72
           SHF ++ +L  S  +  +  R    PIRAC  P  +D             S K ++W + 
Sbjct: 31  SHFSSNVALLPSTSLALNRKRRSYCPIRACGLPDKKDDGGRINEPTSVSGSEKRVSWFET 90

Query: 73  LLKIAADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAA 132
           L   A +NFLPLAL+ GVA G ANPSLGCLAD+Y LSKFSTF IF++SGLTLR+ EI A+
Sbjct: 91  LSTFANNNFLPLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISAS 150

Query: 133 AEAWPVGIFGLDWLYL 148
            EAWPV ++GL  + L
Sbjct: 151 VEAWPVAVYGLVSILL 166

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100629|ref|XP_002311952.1| predicted protein [Populus trichocarpa] gi|222851772|gb|EEE89319.1| predicted protein [Populus trichocarpa]

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 56/73 (76%), Positives = 61/73 (83%)

Query: 71  KPLLKIAADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIG 130
           K LL  A +NFLPLALIGGV  G ANP+LGCLADKY LSKFSTFAIFI SGLTLR+GEIG
Sbjct: 3   KSLLNFADNNFLPLALIGGVVSGLANPTLGCLADKYYLSKFSTFAIFITSGLTLRNGEIG 62

Query: 131 AAAEAWPVGIFGL 143
            A EAWPVG+ G+
Sbjct: 63  DAIEAWPVGVLGI 75

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356534671|ref|XP_003535876.1| PREDICTED: sodium/bile acid cotransporter 7-like [Glycine max]

 Score =  116 bits (290), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/147 (45%), Positives = 84/147 (57%), Gaps = 20/147 (13%)

Query: 6   QTLILTPRPSKMLSSWHRNSHFRASGSLRFSPFVTFSPGRSISRP-----IRACRPSDQ- 59
            +L LTP P+   S  HR  H  A  +L           RS++R      +RAC  S Q 
Sbjct: 25  HSLTLTPFPATASSFRHR--HLYAVKALTL---------RSVTRRLKPALVRACDRSQQM 73

Query: 60  ---DFASSKGLNWAKPLLKIAADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAI 116
                  +KGL+W +P+L  A  N LPLAL+  V  G   PS+GC+ADKY +SK   F I
Sbjct: 74  GGNGSKETKGLSWVEPILTFARRNILPLALVSAVTLGLTYPSIGCVADKYGVSKIGPFGI 133

Query: 117 FIVSGLTLRSGEIGAAAEAWPVGIFGL 143
           F++SGL LRS EIGAA EAWPVG+FGL
Sbjct: 134 FVISGLMLRSEEIGAAVEAWPVGLFGL 160

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42565967|ref|NP_191175.2| Sodium bile acid symporter family protein [Arabidopsis thaliana] gi|403399721|sp|F4IZC4.1|BASS4_ARATH RecName: Full=Probable sodium/metabolite cotransporter BASS4, chloroplastic; AltName: Full=Bile acid transporter 4; AltName: Full=Bile acid-sodium symporter family protein 4; Flags: Precursor gi|332645967|gb|AEE79488.1| Sodium bile acid symporter family protein [Arabidopsis thaliana]

 Score =  116 bits (290), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 65/132 (49%), Positives = 79/132 (59%), Gaps = 33/132 (25%)

Query: 45  RSISRPIRACRPSDQ-------DF--------------------------ASSKGLNWAK 71
           R ISR IRAC+PSD+       DF                          AS++ L + K
Sbjct: 40  RWISRSIRACQPSDKVSGQFPFDFMYSSMLIPSSCGEWNRIHLGGDGGISASAQRLYFGK 99

Query: 72  PLLKIAADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGA 131
            LL  A+DNFLPLAL+ GV  GFANP+LGCLADKY  +K ST  IFI+SGLTLR+  IGA
Sbjct: 100 ELLSFASDNFLPLALVSGVGLGFANPTLGCLADKYSFTKISTCGIFIISGLTLRTEAIGA 159

Query: 132 AAEAWPVGIFGL 143
           A + WP+G+FGL
Sbjct: 160 AVKGWPLGLFGL 171

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|305682289|dbj|BAJ16227.1| putative plastid localized membrane protein [Flaveria trinervia]

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/85 (68%), Positives = 65/85 (76%)

Query: 64  SKGLNWAKPLLKIAADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLT 123
           SK L +A+PLL     NFLPLALIGGV  GFANP+LGCLA  Y +SK ST  IFI+SGLT
Sbjct: 83  SKLLVYAEPLLNFIDINFLPLALIGGVTLGFANPTLGCLAHNYHVSKISTCGIFIISGLT 142

Query: 124 LRSGEIGAAAEAWPVGIFGLDWLYL 148
           LRS EIGAAAEAW VG+FGL  + L
Sbjct: 143 LRSEEIGAAAEAWQVGLFGLASILL 167

Source: Flaveria trinervia

Species: Flaveria trinervia

Genus: Flaveria

Family: Asteraceae

Order: Asterales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297820376|ref|XP_002878071.1| bile acid:sodium symporter [Arabidopsis lyrata subsp. lyrata] gi|297323909|gb|EFH54330.1| bile acid:sodium symporter [Arabidopsis lyrata subsp. lyrata]

 Score =  113 bits (282), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 59/121 (48%), Positives = 76/121 (62%), Gaps = 17/121 (14%)

Query: 45  RSISRPIRACRPSDQDF-----------------ASSKGLNWAKPLLKIAADNFLPLALI 87
           R I R IRAC+ SD+                   AS++  ++ K  +   +DNFLPLAL+
Sbjct: 40  RWIPRSIRACQSSDKVSVSVTIPSLRLGGDGAISASAQRFHFGKEFMSFVSDNFLPLALV 99

Query: 88  GGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLDWLY 147
            GVA GFANP+LGCLADKY  +K ST  IFI+SGLTLR+  IGAA + WP+G+FGL  + 
Sbjct: 100 SGVALGFANPTLGCLADKYSFTKISTCGIFIISGLTLRTEAIGAAVKGWPLGVFGLISIL 159

Query: 148 L 148
           L
Sbjct: 160 L 160

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	174
TAIR|locus:2078471	436	AT3G56160 [Arabidopsis thalian	0.471	0.188	0.634	1.1e-27

TAIR|locus:2078471 AT3G56160 [Arabidopsis thaliana (taxid:3702)]

 Score = 275 (101.9 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
 Identities = 52/82 (63%), Positives = 64/82 (78%)

Query:    62 ASSKGLNWAKPLLKIAADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSG 121
             AS++ L + K LL  A+DNFLPLAL+ GV  GFANP+LGCLADKY  +K ST  IFI+SG
Sbjct:    90 ASAQRLYFGKELLSFASDNFLPLALVSGVGLGFANPTLGCLADKYSFTKISTCGIFIISG 149

Query:   122 LTLRSGEIGAAAEAWPVGIFGL 143
             LTLR+  IGAA + WP+G+FGL
Sbjct:   150 LTLRTEAIGAAVKGWPLGLFGL 171

GO:0006814 "sodium ion transport" evidence=IEA

GO:0008508 "bile acid:sodium symporter activity" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016020 "membrane" evidence=IEA

GO:0035725 "sodium ion transmembrane transport" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	174
pfam13593	313	pfam13593, DUF4137, SBF-like CPA transporter famil	4e-06

>gnl|CDD|222249 pfam13593, DUF4137, SBF-like CPA transporter family (DUF4137)

 Score = 45.2 bits (108), Expect = 4e-06
 Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 80  NFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIV---SGLTLRSGEIGAAAEAW 136
           ++  LAL+  +      P  G      +    +T+A+ ++   SGL L + E+ A    W
Sbjct: 1   DWFLLALVLAILLASLFPVPGAAGGPIRAEYVTTYAVALIFFLSGLKLSTEELLAGLRNW 60

Query: 137 PVGIFGLDWLYL 148
            + +F   + ++
Sbjct: 61  RLHLFVQLFTFV 72

These family members are membrane transporter proteins of the CPA and AT superfamily. Length = 313

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	174
KOG4821	287	consensus Predicted Na+-dependent cotransporter [G	99.83
PF13593	313	DUF4137: SBF-like CPA transporter family (DUF4137)	99.62
COG0385	319	Predicted Na+-dependent transporter [General funct	98.27
TIGR00832	328	acr3 arsenical-resistance protein. The first prote	97.5
TIGR00841	286	bass bile acid transporter. Functionally character	93.38
COG0798	342	ACR3 Arsenite efflux pump ACR3 and related permeas	88.85
PF01758	187	SBF: Sodium Bile acid symporter family; InterPro:	88.16

>KOG4821 consensus Predicted Na+-dependent cotransporter [General function prediction only]

Probab=99.83  E-value=1.2e-20  Score=162.76  Aligned_cols=108  Identities=21%  Similarity=0.268  Sum_probs=96.8

Q ss_pred             hccccccchHHHHHHHHhhhhHHHHHHHHHHHhcCCCC----ceeeeeeeeeeeeEEeEeeecCCccchhHHHHHHhcCc
Q 030602           62 ASSKGLNWAKPLLKIAADNFLPLALIGGVAFGFANPSL----GCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWP  137 (174)
Q Consensus        62 ~~~k~~~w~~~v~~F~ikNfLplal~vaivlal~~P~p----G~~~~eysIsy~ava~IFLISGLtLkT~eL~~al~~Wr  137 (174)
                      .+..+..|.+|+.++..++|+.++...+++.+-+.|+.    |+.++||+++|+||++||++|||+|||||+.+|+.|||
T Consensus         5 ~~~~r~i~~~R~~e~~~~~Wf~~~I~~~i~~aKL~p~~G~~gG~Lk~~ys~~yI~va~IF~~SGL~LkTE~l~aA~~~w~   84 (287)
T KOG4821|consen    5 YSLIRKIWAHRVTEFLKSQWFFICIAILIVIAKLAPNFGRDGGLLKGQYSIGYICVAWIFLQSGLGLKTESLMAAMLNWR   84 (287)
T ss_pred             CcchHHHHHHHHHHHHhcchHHHHHHHhhhHhhhCCCCCccCCcccCceeEEeEEEEEEEeecCccccHHHHHHHHhCCc
Confidence            34556789999999999999999999999999999999    89999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHhhHHHH---hcccch-h--hHHHHhH
Q 030602          138 VGIFGLDWLYLAACQQHY---QVEWHL-P--ILLGGIL  169 (174)
Q Consensus       138 a~l~glvsILliTP~ii~---~i~~~p-~--ef~~GLa  169 (174)
                      .|+|+++++|++||+++|   ++...| .  |+..||-
T Consensus        85 LhLFilI~~Ll~tPs~~~Lf~~~~~~~~i~~wLl~GL~  122 (287)
T KOG4821|consen   85 LHLFILILSLLITPSIVYLFCCAVKAAKIDDWLLIGLI  122 (287)
T ss_pred             hHHHHHHHHHHHhHHHHHHHHHHHhCcchhHHHHhhhe
Confidence            999999999999996654   344444 3  7888873

>PF13593 DUF4137: SBF-like CPA transporter family (DUF4137)

Probab=99.62  E-value=1.6e-16  Score=137.85  Aligned_cols=92  Identities=23%  Similarity=0.382  Sum_probs=80.1

Q ss_pred             hhhHHHHHHHHHHHhcCCCCceeeeeee---eeeeeEEeEeeecCCccchhHHHHHHhcCchHHHHHHHHHHHhh---HH
Q 030602           80 NFLPLALIGGVAFGFANPSLGCLADKYQ---LSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLDWLYLAAC---QQ  153 (174)
Q Consensus        80 NfLplal~vaivlal~~P~pG~~~~eys---Isy~ava~IFLISGLtLkT~eL~~al~~Wra~l~glvsILliTP---~i  153 (174)
                      |||++++++++++|+++|.+|...+.++   +..+++++||++||++|+|+|++++++|||.|+++++.+|+++|   +.
T Consensus         1 ~~fl~~l~~ai~la~~~P~~g~~~~~~~~~~~~~~~v~~iFf~~Gl~L~~~~l~~~~~~~~~~l~~~~~~fvl~Pll~~~   80 (313)
T PF13593_consen    1 QWFLLGLLLAILLAYLFPAPGAAGGVIKPEYVIKYGVALIFFISGLSLPTEELKAALRNWRLHLFVQAFNFVLFPLLGFG   80 (313)
T ss_pred             CchHHHHHHHHHHHHHcCcccccCCccchhhhHHHHHHHHHHHHcCCCCHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999988554443   23345999999999999999999999999999999999999999   44


Q ss_pred             HHhcc--cchhhHHHHhHhh
Q 030602          154 HYQVE--WHLPILLGGILHL  171 (174)
Q Consensus       154 i~~i~--~~p~ef~~GLa~~  171 (174)
                      ++++.  +.++|+..|+.-+
T Consensus        81 ~~~l~~~~~~~~l~~Gl~~~  100 (313)
T PF13593_consen   81 LSRLFPAFLPPELALGLLIL  100 (313)
T ss_pred             HHHHhhccCCHHHHHHHHHH
Confidence            66666  7899999998754

>COG0385 Predicted Na+-dependent transporter [General function prediction only]

Probab=98.27  E-value=5.5e-07  Score=80.48  Aligned_cols=98  Identities=17%  Similarity=0.079  Sum_probs=75.1

Q ss_pred             HHHHHHhhhhHHHHHHHHHHHhcCCCCceeeeeee-eeeeeEEeEeeecCCccchhHHHHHHhcCchHHHHHHHHHHHhh
Q 030602           73 LLKIAADNFLPLALIGGVAFGFANPSLGCLADKYQ-LSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLDWLYLAAC  151 (174)
Q Consensus        73 v~~F~ikNfLplal~vaivlal~~P~pG~~~~eys-Isy~ava~IFLISGLtLkT~eL~~al~~Wra~l~glvsILliTP  151 (174)
                      ..+++..+++-..++..++++...|..|......+ ..+++.++||+-.|++|+.+|+++.+++||.|+.|+.+-|.+.|
T Consensus         3 ~~~~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~lImf~mGl~Ls~~d~~~~~~~p~~vligl~~qfvlmP   82 (319)
T COG0385           3 LLRFLSRDPFKIFLLWVVLLAAIAPIFPETFGWLGSAIPIALALIMFGMGLTLSREDFLAGLKHPRLVLIGLAAQFVLMP   82 (319)
T ss_pred             HHHHHhHhHHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhcCCCCCHHHHHHhhcchHHHHHHHHHHHHHHH
Confidence            34566666655566666666666666655555543 35889999999999999999999999999999999999999999


Q ss_pred             HH---HHhcccchhhHHHHhHh
Q 030602          152 QQ---HYQVEWHLPILLGGILH  170 (174)
Q Consensus       152 ~i---i~~i~~~p~ef~~GLa~  170 (174)
                      .+   +-++.-.|+|...|+--
T Consensus        83 lla~~~~~~~~l~~~l~~Gl~l  104 (319)
T COG0385          83 LLALLLAKLFPLPPELAVGLLL  104 (319)
T ss_pred             HHHHHHHHHcCCCHHHHHhHHh
Confidence            33   33333379999999854

>TIGR00832 acr3 arsenical-resistance protein

Probab=97.50  E-value=4.5e-05  Score=67.08  Aligned_cols=93  Identities=15%  Similarity=0.093  Sum_probs=68.6

Q ss_pred             HhhhhHHHHHHHHHHHhcCCCCceeeeeee---ee-eeeEEeEeeecC--CccchhHHHHHHhcCchHHHHHHHHHHHhh
Q 030602           78 ADNFLPLALIGGVAFGFANPSLGCLADKYQ---LS-KFSTFAIFIVSG--LTLRSGEIGAAAEAWPVGIFGLDWLYLAAC  151 (174)
Q Consensus        78 ikNfLplal~vaivlal~~P~pG~~~~eys---Is-y~ava~IFLISG--LtLkT~eL~~al~~Wra~l~glvsILliTP  151 (174)
                      ...|..++.+.++++|+.+|..+....++.   +. ..+++.+|+..|  ++|+.+|+++.+++||.++.|++.-+.+.|
T Consensus         8 ~~~~~~~~~i~~~~~g~~~P~~~~~~~~~~~~~~~~~~~~~l~~mmf~mgl~L~~~df~~~~~~pk~~~~~~~~qfvi~P   87 (328)
T TIGR00832         8 LTLWIFLAIAAGVGLGVLFPSVFQALAALEVATVSIPIAIGLILMMYPPLAKVDYSALGDVFKDPKGLILSLFINWIIGP   87 (328)
T ss_pred             HHHHHHHHHHHHHHHHHhccccHHHHHHHHhhhhHHHHHHHHHHHHHHhhhcCCHHHHHHHHcCchHHHHHHHHHHHHHH
Confidence            346777777888899999999976554432   11 233344455555  999999999999999999999999999999


Q ss_pred             HHH---Hhcc-cchhhHHHHhHh
Q 030602          152 QQH---YQVE-WHLPILLGGILH  170 (174)
Q Consensus       152 ~ii---~~i~-~~p~ef~~GLa~  170 (174)
                      ...   .++- -.|+|++.|+--
T Consensus        88 lla~~l~~l~~~~~p~l~~GliL  110 (328)
T TIGR00832        88 FLMFLLAWLFLRDLFEYIAGLIL  110 (328)
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHH
Confidence            433   3432 247889999753

The first protein of the ACR3 family functionally characterized was the ACR3 protein of Saccharomyces cerevisiae. It is present in the yeast plasma membrane and pumps arsenite out of the cell in response to the pmf. Similar proteins are found in bacteria, often as part of a four gene operon with an regulatory protein ArsR, a protein of unknown function ArsH, and an arsenate reductase that converts arsenate to arsenite to facilitate transport.

>TIGR00841 bass bile acid transporter

Probab=93.38  E-value=0.068  Score=45.99  Aligned_cols=57  Identities=25%  Similarity=0.075  Sum_probs=46.0

Q ss_pred             EEeEeeecCCccchhHHHHHHhcCchHHHHHHHHHHHhhHH---HHhcccchhhHHHHhH
Q 030602          113 TFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLDWLYLAACQQ---HYQVEWHLPILLGGIL  169 (174)
Q Consensus       113 va~IFLISGLtLkT~eL~~al~~Wra~l~glvsILliTP~i---i~~i~~~p~ef~~GLa  169 (174)
                      .+++++..|++|+.+|+++.+++|+.+..++..-+++.|.+   +.++--.++|...|+-
T Consensus        14 l~~~m~~~G~~l~~~~~~~~~~~p~~~~~~~~~~~vi~Plla~~l~~~~~l~~~~~~glv   73 (286)
T TIGR00841        14 LFLIMFSMGCTLEFEDFKGHLRKPWGVIIGLLAQYGIMPLTGFLLAKVFKLPPELAVGVL   73 (286)
T ss_pred             HHHHHHHccCCCcHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence            45667789999999999999999999999999999999933   3333344677777764

Functionally characterized members of the BASS family catalyze Na+:bile acid symport. These systems have been identified in intestinal, liver and kidney tissues of animals. These symporters exhibit broad specificity, taking up a variety of non bile organic compounds as well as taurocholate and other bile salts. Functionally uncharacterised homologues are found in plants, yeast, archaea and bacteria.

>COG0798 ACR3 Arsenite efflux pump ACR3 and related permeases [Inorganic ion transport and metabolism]

Probab=88.85  E-value=0.62  Score=42.77  Aligned_cols=89  Identities=17%  Similarity=0.141  Sum_probs=64.9

Q ss_pred             hhHHHHHHHHHHHhcCCCCceeeeeeeeeeee----EEeEeeec--CCccchhHHHHHHhcCchHHHHHHHHHHHhhHHH
Q 030602           81 FLPLALIGGVAFGFANPSLGCLADKYQLSKFS----TFAIFIVS--GLTLRSGEIGAAAEAWPVGIFGLDWLYLAACQQH  154 (174)
Q Consensus        81 fLplal~vaivlal~~P~pG~~~~eysIsy~a----va~IFLIS--GLtLkT~eL~~al~~Wra~l~glvsILliTP~ii  154 (174)
                      |..++.++++.+|..+|......++.++...+    +..+..+=  =++.+=||++++.++|+..+..+..=..+-|+.+
T Consensus        19 wv~l~i~~Gi~lG~~~p~~~~~l~~~~~~~~sipiai~L~~MmYP~m~ki~~~~~~~v~k~~k~L~lsL~~Nwii~P~lm   98 (342)
T COG0798          19 WVFLAIAIGILLGVHFPGLAQLLGKLEFGGVSIPIAIGLILMMYPPMLKIDFEELKNVFKDPKPLILSLFVNWIIGPLLM   98 (342)
T ss_pred             HHHHHHHHHHHHHhcccchhhhcccceeCceehhHHHHHHHHHhHHHhcCCHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence            67889999999999999987777765553322    12222111  2577899999999999999999999899999433


Q ss_pred             Hh-----cccchhhHHHHhHh
Q 030602          155 YQ-----VEWHLPILLGGILH  170 (174)
Q Consensus       155 ~~-----i~~~p~ef~~GLa~  170 (174)
                      +-     ++..| |++.|+--
T Consensus        99 ~~la~~fl~~~p-ey~~GlIL  118 (342)
T COG0798          99 FALAWFFLPDEP-EYRAGLIL  118 (342)
T ss_pred             HHHHHHHhCCCH-HHHHHHHH
Confidence            32     25566 99999753

>PF01758 SBF: Sodium Bile acid symporter family; InterPro: IPR002657 This family of proteins are found both in prokaryotes and eukaryotes

Probab=88.16  E-value=0.54  Score=37.66  Aligned_cols=53  Identities=19%  Similarity=0.157  Sum_probs=39.4

Q ss_pred             eeecCCccchhHHHHHHhcCchHHHHHHHHHHHhhHHHH----hcccchhhHHHHhH
Q 030602          117 FIVSGLTLRSGEIGAAAEAWPVGIFGLDWLYLAACQQHY----QVEWHLPILLGGIL  169 (174)
Q Consensus       117 FLISGLtLkT~eL~~al~~Wra~l~glvsILliTP~ii~----~i~~~p~ef~~GLa  169 (174)
                      -+..|++++-||+++..++++..+.|++.-+++.|...+    .+--.+++.+.|+.
T Consensus         8 mf~~gl~~~~~~l~~~~~~p~~l~~~l~~~~~i~Plla~~l~~~~~~~~~~~~~Gl~   64 (187)
T PF01758_consen    8 MFSMGLSLTFEDLRRVLRRPKLLLIGLLAQFLIMPLLAFGLAWLLLPLSPALALGLL   64 (187)
T ss_dssp             HHHHHHC--GGGGHHHHHSHHHHHHHHHHHHHHHHHHHHHHH-HHTT--HHHHHHHH
T ss_pred             HHHhhhcccHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence            345799999999999999999999999999999994333    33344677777764

They are related to the human bile acid:sodium symporters, which are transmembrane proteins functioning in the liver in the uptake of bile acids from portal blood plasma, a process mediated by the co-transport of Na+ []. In yeast, overexpression of the ACR3 gene confers an arsenite- but not an arsenate-resistance phenotype [].; GO: 0008508 bile acid:sodium symporter activity, 0006814 sodium ion transport, 0016020 membrane; PDB: 3ZUX_A 3ZUY_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	174
3zux_A	332	Transporter, ASBTNM; transport protein, membrane p	98.56

>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A*

Probab=98.56  E-value=1.5e-08  Score=87.08  Aligned_cols=100  Identities=16%  Similarity=0.052  Sum_probs=82.7

Q ss_pred             cchHHHHHHHHhhhhHHHHHHHHHHHhcCCCCceeeeeeeeeeeeEEeEeeecCCccchhHHHHHHhcCchHHHHHHHHH
Q 030602           68 NWAKPLLKIAADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLDWLY  147 (174)
Q Consensus        68 ~w~~~v~~F~ikNfLplal~vaivlal~~P~pG~~~~eysIsy~ava~IFLISGLtLkT~eL~~al~~Wra~l~glvsIL  147 (174)
                      +..+++.+|+ +||+++..++++++|+++|..+.....+  ...+++++++..|++++.+|+++.+++||.++.+++.-+
T Consensus         7 ~~l~~~~~~l-~~~~~l~i~~~~~lg~~~P~~~~~~~~~--i~~~l~~~mf~~G~~l~~~~l~~~~~~~~~~~~~l~~~~   83 (332)
T 3zux_A            7 NILSKISSFI-GKTFSLWAALFAAAAFFAPDTFKWAGPY--IPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQF   83 (332)
T ss_dssp             CHHHHHHHHH-HHTHHHHHHHHHHHHHHCGGGTGGGGGG--HHHHHHHHHHHHHHHCCGGGGHHHHHSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHHHHHHHcchhhhhhHHH--HHHHHHHHHHHHHhCCCHHHHHHHHhCcHHHHHHHHHHH
Confidence            3468888988 6899999999999999999998765432  345788999999999999999999999999999999999


Q ss_pred             HHhhHHHHh---cccchhhHHHHhHh
Q 030602          148 LAACQQHYQ---VEWHLPILLGGILH  170 (174)
Q Consensus       148 liTP~ii~~---i~~~p~ef~~GLa~  170 (174)
                      ++.|...+-   +--.++|...|+.-
T Consensus        84 vi~Pll~~~l~~~~~l~~~~~~Glil  109 (332)
T 3zux_A           84 AIMPATAWCLSKLLNLPAEIAVGVIL  109 (332)
T ss_dssp             HHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCChHHHHHHHH
Confidence            999944433   32346788888754

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00