Citrus Sinensis ID: 030726

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170--
Protein Sequence
MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccEEEEcccccccccccccccHHHHHHHHHHHHcccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcEcccccEEEcccccEEccEcccccccccccHHHHHHHHHHHHccEEEccccccc
Coil and Loop (DISEMBL)
mdhdetgcqappegpilcinncgffgSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIvnetsssngsesvAAATVDVqassvepkiisvqpscaselsesveakpkegpsrcssckkrvgltgfkcrcgnlycvshrysdkhncpfdyRTAARDAIIkanpvikaekldki
Flexible Loop (DISEMBL)
mdhdetgcqappegpILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNetsssngseSVAAATVDVQASSVEPKIISVQPSCASELSEsveakpkegpsrcssckkrvgltgfkCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIkanpvikaekldki
Low Complexity Region (SEG)
MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI
Disordered region (IsUnstruct)
**************PILCINNCGFFGSVATMNMCSKCYKDIMLKQD*********************************************************************CKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVI********
Disordered Region (DISOPRED)
******************INNCGFFGSVATMNMCSKCY***********************************************************************PSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI
Disordered Region (DISEMBL)
*********APPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIV***************TVDVQASSVEPKIISVQ************************CKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI
Disordered Region (DISPRO)
************EGPILCINNCGFFGSVATMNMCSKCYKDIMLKQ****************************************************************PSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKL*K*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	172	2.2.26 [Sep-21-2011]
A3BDI8	171	Zinc finger A20 and AN1 d	yes	no	0.982	0.988	0.678	2e-62
A2YEZ6	171	Zinc finger A20 and AN1 d	N/A	no	0.982	0.988	0.678	2e-62
Q6H7P8	173	Zinc finger A20 and AN1 d	no	no	0.982	0.976	0.653	2e-60
Q8H0X0	173	Zinc finger A20 and AN1 d	yes	no	0.976	0.971	0.610	9e-51
Q7Y1W9	161	Zinc finger A20 and AN1 d	no	no	0.843	0.900	0.453	4e-34
Q9SJM6	161	Zinc finger A20 and AN1 d	no	no	0.906	0.968	0.436	7e-34
Q9SZ69	175	Zinc finger A20 and AN1 d	no	no	0.936	0.92	0.4	7e-33
Q852K5	160	Zinc finger A20 and AN1 d	no	no	0.837	0.9	0.428	5e-32
Q6NNI8	168	Zinc finger A20 and AN1 d	no	no	0.906	0.928	0.416	4e-31
Q9ZNU9	163	Zinc finger A20 and AN1 d	no	no	0.895	0.944	0.373	1e-29

>sp|A3BDI8|SAP8_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1

 Score =  238 bits (606), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 118/174 (67%), Positives = 136/174 (78%), Gaps = 5/174 (2%)

Query: 1   MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVN 60
           M+H ETGCQ P EGPILCINNCGFFGS ATMNMCSKC+K++++KQ+QAKLAASSI SIVN
Sbjct: 1   MEHKETGCQQP-EGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVN 59

Query: 61  ETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPK--EGPSRCSSCKK 118
              S  G E + A   +V  + VE K +  QP+  +  SE V   PK  EGP+RCS+C+K
Sbjct: 60  GGDS--GKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRK 117

Query: 119 RVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
           RVGLTGF CRCGNLYC  HRYSDKH+C FDYRTAARDAI KANPV+KAEKLDKI
Sbjct: 118 RVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171

May be involved in environmental stress response.
Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2YEZ6|SAP8_ORYSI Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2

 Score =  238 bits (606), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 118/174 (67%), Positives = 136/174 (78%), Gaps = 5/174 (2%)

Query: 1   MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVN 60
           M+H ETGCQ P EGPILCINNCGFFGS ATMNMCSKC+K++++KQ+QAKLAASSI SIVN
Sbjct: 1   MEHKETGCQQP-EGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVN 59

Query: 61  ETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPK--EGPSRCSSCKK 118
              S  G E + A   +V  + VE K +  QP+  +  SE V   PK  EGP+RCS+C+K
Sbjct: 60  GGDS--GKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRK 117

Query: 119 RVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
           RVGLTGF CRCGNLYC  HRYSDKH+C FDYRTAARDAI KANPV+KAEKLDKI
Sbjct: 118 RVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171

May be involved in environmental stress response.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q6H7P8|SAP4_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica GN=SAP4 PE=2 SV=1

 Score =  231 bits (589), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 115/176 (65%), Positives = 135/176 (76%), Gaps = 7/176 (3%)

Query: 1   MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVN 60
           M+H E GCQ  PEGPILCINNCGFFGS ATMNMCSKC+K++++K++QAKLAASSI SIVN
Sbjct: 1   MEHKEAGCQ-QPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVN 59

Query: 61  ETSSSNGSESVAAAT--VDVQASSVEPKIISVQPSCASELSESVEAKPK--EGPSRCSSC 116
                 G E + AA+    V  + VE K + VQP+  +  SE V   PK  EGP+RC++C
Sbjct: 60  --GCDGGKEHIVAASGSTAVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATC 117

Query: 117 KKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
           +KRVGLTGF CRCGN+YC  HRYSDKH C FDYRTAARDAI KANPV+KAEKLDKI
Sbjct: 118 RKRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8H0X0|SAP2_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana GN=SAP2 PE=2 SV=2

 Score =  199 bits (505), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 108/177 (61%), Positives = 137/177 (77%), Gaps = 9/177 (5%)

Query: 1   MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQ-AKLAASSIGSIV 59
           MDHD+TGCQ+PPEGP LC NNCGFFGS ATMNMCSKC+KD++ +Q+Q AK A++  G+  
Sbjct: 1   MDHDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSGT-- 58

Query: 60  NETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVE----AKPKEGPSRCSS 115
             +SS+   E+  AA VD++  SVEP  +SVQPS    ++E V     AKPK GPSRC++
Sbjct: 59  -SSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPK-GPSRCTT 116

Query: 116 CKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
           C KRVGLTGFKCRCG+L+C +HRY+D H+C F+Y  AA++AI KANPV+KAEKLDKI
Sbjct: 117 CNKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q7Y1W9|SAP9_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica GN=SAP9 PE=2 SV=1

 Score =  143 bits (361), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 73/161 (45%), Positives = 99/161 (61%), Gaps = 16/161 (9%)

Query: 12  PEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESV 71
           PE PILC+NNCGFFGS  T NMCSKCY+D +       +AA  +       +SS+ +   
Sbjct: 17  PEAPILCVNNCGFFGSSMTNNMCSKCYRDFV---KVTTMAAPVVEKKAFTPASSSKTPLE 73

Query: 72  AAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGN 131
            A   +V A++VE K  + +P             PK   +RC SC+K+VGLTGF+CRCG 
Sbjct: 74  PAKPDEVPAAAVEDKQAAQEP-------------PKPPSNRCLSCRKKVGLTGFQCRCGG 120

Query: 132 LYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
            +C +HRY++ H+C FDY+ A RD I K NPV+ AEK++KI
Sbjct: 121 TFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SJM6|SAP4_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1

 Score =  143 bits (360), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 100/172 (58%), Gaps = 16/172 (9%)

Query: 4   DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETS 63
           +E  C+ P EG  LC+NNCGFFGS ATMN+CS CY D+ LKQ Q     S++ S ++   
Sbjct: 3   EEHRCETP-EGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVESSLSPVI 61

Query: 64  SSNGSESVAAATVDVQASSVEPKIISV---QPSCASELSESVEAKPKEGPSRCSSCKKRV 120
           +       A   +     + E K I +   QPS            P + P+RC+ C+KRV
Sbjct: 62  APVLENYAAELEIPTTKKTEEKKPIQIPTEQPS------------PPQRPNRCTVCRKRV 109

Query: 121 GLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
           GLTGF CRCG  +C SHRY + H C FD+++A R+ I KANP++ A KL KI
Sbjct: 110 GLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQKI 161

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SZ69|SAP7_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana GN=SAP7 PE=1 SV=1

 Score =  139 bits (351), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 107/165 (64%), Gaps = 4/165 (2%)

Query: 11  PPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSES 70
           PP  P LC N CGFFGS + MN+CSKCY+ +  ++DQ  +A +++ + +   S S  +  
Sbjct: 12  PPTEPKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAAVKNSLKLPSCSIIAPG 71

Query: 71  VAAATVDVQASSVEPKIISVQPS---CASELSESVEAKPKEGPSRCSSCKKRVGLTGFKC 127
                ++++ + +E  +++ +PS    A+E  E+  ++P    +RC SC K+VG+ GFKC
Sbjct: 72  -QKHPLEIKPAHLETVVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVGVMGFKC 130

Query: 128 RCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
           +CG+ +C SHRY +KH C FD++   RDAI KANP++KA+K+ +I
Sbjct: 131 KCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQRI 175

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q852K5|SAP6_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1

 Score =  136 bits (343), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 75/175 (42%), Positives = 98/175 (56%), Gaps = 31/175 (17%)

Query: 4   DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQ------DQAKLAASSIGS 57
           +ETG   P E PILC+NNCGFFGS  T NMCSKCY+D +  +      ++  LA+ S   
Sbjct: 11  EETGVHTP-EAPILCVNNCGFFGSRMTENMCSKCYRDTVKAKTVATVVEKKPLASLSSTP 69

Query: 58  IVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCK 117
           +V E +   GS SVA     ++                       E  PK   +RC SC+
Sbjct: 70  LVTEVTD-GGSGSVADGKQVME-----------------------EDTPKPPSNRCLSCR 105

Query: 118 KRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
           K+VGLTGFKCRCG  +C  HRY+D H C FDY+   R+ I K NP++KA+K+ KI
Sbjct: 106 KKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q6NNI8|SAP1_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana GN=SAP1 PE=1 SV=1

 Score =  134 bits (336), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 67/161 (41%), Positives = 93/161 (57%), Gaps = 5/161 (3%)

Query: 12  PEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESV 71
           P  P LC+  CGFFGS + MN+CSKCY+DI   ++Q   A +++   +N        +  
Sbjct: 13  PSEPKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLNPNKPKTQPQQS 72

Query: 72  AAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGN 131
              T  V  S           S A+ L       PK   +RC SC K+VG+TGFKCRCG+
Sbjct: 73  QEITQGVLGSGSSSSSTRGGDSAAAPLDP-----PKSTATRCLSCNKKVGVTGFKCRCGS 127

Query: 132 LYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
            +C +HRY + H C FD++  AR+AI KANPV+KA+K+D+I
Sbjct: 128 TFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVDRI 168

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZNU9|SAP3_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Arabidopsis thaliana GN=SAP3 PE=2 SV=1

 Score =  129 bits (323), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 101/158 (63%), Gaps = 4/158 (2%)

Query: 15  PILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAA 74
           P LC NNCGFFGS AT N+CSKC++D+   Q Q + ++++  ++    ++   + S + +
Sbjct: 10  PRLCANNCGFFGSTATQNLCSKCFRDL---QHQEQNSSTAKHALTQSLAAVGAAASSSVS 66

Query: 75  TVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYC 134
                 +  +  + +     A+   E  +  P++ P RC +C++RVG+TGF+CRCG ++C
Sbjct: 67  PPPPPPADSKEIVEAKSEKRAAAEPEEADGPPQD-PKRCLTCRRRVGITGFRCRCGFVFC 125

Query: 135 VSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
            +HRY+++H C FD++   +D I KANP++KA+KL+KI
Sbjct: 126 GTHRYAEQHECSFDFKRMGKDKIAKANPIVKADKLEKI 163

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	172
224075782	172	predicted protein [Populus trichocarpa]	1.0	1.0	0.796	1e-76
224053364	172	predicted protein [Populus trichocarpa]	1.0	1.0	0.790	7e-76
225435496	172	PREDICTED: zinc finger A20 and AN1 domai	1.0	1.0	0.784	9e-73
351722295	174	uncharacterized protein LOC100499857 [Gl	1.0	0.988	0.758	1e-71
217071130	172	unknown [Medicago truncatula] gi|3884941	1.0	1.0	0.732	9e-71
225441720	172	PREDICTED: zinc finger A20 and AN1 domai	0.982	0.982	0.747	4e-69
224139844	170	predicted protein [Populus trichocarpa]	0.970	0.982	0.770	1e-68
224120188	171	predicted protein [Populus trichocarpa]	0.976	0.982	0.758	7e-68
351727441	176	uncharacterized protein LOC100500070 [Gl	1.0	0.977	0.738	1e-67
356557589	172	PREDICTED: zinc finger A20 and AN1 domai	1.0	1.0	0.738	2e-67

>gi|224075782|ref|XP_002304765.1| predicted protein [Populus trichocarpa] gi|118482084|gb|ABK92973.1| unknown [Populus trichocarpa] gi|118483879|gb|ABK93830.1| unknown [Populus trichocarpa] gi|118486451|gb|ABK95065.1| unknown [Populus trichocarpa] gi|222842197|gb|EEE79744.1| predicted protein [Populus trichocarpa]

 Score =  290 bits (743), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 137/172 (79%), Positives = 155/172 (90%)

Query: 1   MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVN 60
           MD DETGCQAPPE PILCINNCGFFGS ATMNMCSKC+KD++LKQ+Q KLAASSIGSIVN
Sbjct: 1   MDRDETGCQAPPERPILCINNCGFFGSAATMNMCSKCHKDMLLKQEQTKLAASSIGSIVN 60

Query: 61  ETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRV 120
            ++SSN +E V A T++VQ ++VEPK I+VQPSCAS   E VEAKPKEGPSRC+SCKKRV
Sbjct: 61  GSASSNVNEPVIADTINVQINAVEPKTITVQPSCASVSGERVEAKPKEGPSRCTSCKKRV 120

Query: 121 GLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
           GLTGFKCRCG+L+C SHRYSDKH+CPFDYRTAAR+AI KANPV+KAEKLDKI
Sbjct: 121 GLTGFKCRCGDLFCASHRYSDKHDCPFDYRTAAREAIAKANPVVKAEKLDKI 172

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053364|ref|XP_002297783.1| predicted protein [Populus trichocarpa] gi|118481683|gb|ABK92782.1| unknown [Populus trichocarpa] gi|222845041|gb|EEE82588.1| predicted protein [Populus trichocarpa]

 Score =  288 bits (736), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 136/172 (79%), Positives = 153/172 (88%)

Query: 1   MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVN 60
           MDHDETGCQAPPEGPILC NNCGFFGS ATMNMCSKC+K ++LKQ+QA LAASSIGSIVN
Sbjct: 1   MDHDETGCQAPPEGPILCTNNCGFFGSAATMNMCSKCHKGMLLKQEQANLAASSIGSIVN 60

Query: 61  ETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRV 120
            +SSSN  E V A  +DVQ ++VEPK I+VQPSCAS   E VEAKPKEGP+RC+SCKKRV
Sbjct: 61  GSSSSNVFEPVIADIIDVQNNAVEPKTITVQPSCASGSGERVEAKPKEGPNRCTSCKKRV 120

Query: 121 GLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
           GLTGFKCRCG+L+C SHRYSDKH+CPFDYR+AAR+AI KANPV+KAEKLDKI
Sbjct: 121 GLTGFKCRCGSLFCASHRYSDKHDCPFDYRSAAREAIAKANPVVKAEKLDKI 172

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435496|ref|XP_002285530.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8-like isoform 2 [Vitis vinifera] gi|225435500|ref|XP_002285528.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8-like isoform 1 [Vitis vinifera]

 Score =  277 bits (709), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 135/172 (78%), Positives = 150/172 (87%)

Query: 1   MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVN 60
           MDHDETGCQA PEGPILCINNCGFFGS ATMNMCSKC+KD+MLKQ+QAKLAASSI SIVN
Sbjct: 1   MDHDETGCQAHPEGPILCINNCGFFGSPATMNMCSKCHKDMMLKQEQAKLAASSIDSIVN 60

Query: 61  ETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRV 120
            +SS+NG E   A+TVDVQ  + EPKIISVQ S +     S EAKPKEGP+RCS+CKKRV
Sbjct: 61  GSSSNNGKEPAIASTVDVQVDAKEPKIISVQSSFSFGSEGSGEAKPKEGPNRCSTCKKRV 120

Query: 121 GLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
           GLTGF CRCG+L+C +HRYSDKH+CPFDYRTAARDAI KANPV+KAEKLDKI
Sbjct: 121 GLTGFNCRCGHLFCATHRYSDKHDCPFDYRTAARDAIAKANPVVKAEKLDKI 172

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351722295|ref|NP_001236983.1| uncharacterized protein LOC100499857 [Glycine max] gi|255627175|gb|ACU13932.1| unknown [Glycine max]

 Score =  273 bits (699), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 132/174 (75%), Positives = 147/174 (84%), Gaps = 2/174 (1%)

Query: 1   MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVN 60
           MDHD+TGCQAPPEGPILCINNCGFFGS ATMNMCSKC+KDI+LKQ+QAKLAASSIG+I+N
Sbjct: 1   MDHDKTGCQAPPEGPILCINNCGFFGSAATMNMCSKCHKDILLKQEQAKLAASSIGNIMN 60

Query: 61  ETSSSNGSESV--AAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKK 118
            +SSS   E V  AAA +D+    VEPK +SVQP   S    SVEAKPK+GP RCSSC K
Sbjct: 61  GSSSSTEKEPVVAAAANIDIPVIPVEPKTVSVQPLFGSGPEGSVEAKPKDGPKRCSSCNK 120

Query: 119 RVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
           RVGLTGF CRCG+L+C  HRYSDKHNCPFDYRTAA+DAI KANPV+KAEKLDKI
Sbjct: 121 RVGLTGFNCRCGDLFCAVHRYSDKHNCPFDYRTAAQDAIAKANPVVKAEKLDKI 174

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217071130|gb|ACJ83925.1| unknown [Medicago truncatula] gi|388494106|gb|AFK35119.1| unknown [Medicago truncatula] gi|388510554|gb|AFK43343.1| unknown [Medicago truncatula]

 Score =  271 bits (692), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 126/172 (73%), Positives = 144/172 (83%)

Query: 1   MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVN 60
           MDHD+TGC+A PEGP+LCINNCGFFGS ATMNMCSKC+KD+MLKQ+QA LAASSIG+I+N
Sbjct: 1   MDHDQTGCEAAPEGPMLCINNCGFFGSAATMNMCSKCHKDMMLKQEQATLAASSIGNIMN 60

Query: 61  ETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRV 120
            +SSS+G E    A V++    VEPKIIS +P  AS   ES+E KPK+GP RCS+C KRV
Sbjct: 61  GSSSSSGIEPAITANVEISVDPVEPKIISAEPLVASGSEESLEKKPKDGPKRCSNCNKRV 120

Query: 121 GLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
           GLTGF CRCGNLYC  HRYSDKH+CPFDYRTA RDAI KANPV+KAEKLDKI
Sbjct: 121 GLTGFNCRCGNLYCAVHRYSDKHDCPFDYRTAGRDAIAKANPVVKAEKLDKI 172

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225441720|ref|XP_002283046.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8 isoform 1 [Vitis vinifera] gi|225441722|ref|XP_002283050.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8 isoform 2 [Vitis vinifera] gi|147783026|emb|CAN65596.1| hypothetical protein VITISV_027161 [Vitis vinifera]

 Score =  265 bits (678), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 127/170 (74%), Positives = 145/170 (85%), Gaps = 1/170 (0%)

Query: 3   HDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNET 62
           HDETGCQAP EGPILCINNCGFFGS ATMNMCSKC+KD+ LKQ+QAKLAASSIGSIVN +
Sbjct: 4   HDETGCQAP-EGPILCINNCGFFGSAATMNMCSKCHKDLALKQEQAKLAASSIGSIVNGS 62

Query: 63  SSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGL 122
           SS NG E + A TVDVQA  VE K IS + S  S  ++ +E+K KEGP+RC++C+KRVGL
Sbjct: 63  SSGNGKEPIVAGTVDVQAGPVEVKAISAEASNDSSSNQIIESKVKEGPNRCTACRKRVGL 122

Query: 123 TGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
           TGF C+CGNL+C  HRYSDKH+CPFDYRTAARDAI KANPV+KAEKLDKI
Sbjct: 123 TGFNCKCGNLFCAVHRYSDKHDCPFDYRTAARDAIAKANPVVKAEKLDKI 172

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139844|ref|XP_002323304.1| predicted protein [Populus trichocarpa] gi|118486021|gb|ABK94854.1| unknown [Populus trichocarpa] gi|118489161|gb|ABK96387.1| unknown [Populus trichocarpa x Populus deltoides] gi|222867934|gb|EEF05065.1| predicted protein [Populus trichocarpa]

 Score =  264 bits (674), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 131/170 (77%), Positives = 143/170 (84%), Gaps = 3/170 (1%)

Query: 3   HDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNET 62
           HDETGCQAP EGPILCINNCGFFGS ATMNMCSKC+KDI+L Q QA+LAASSI SIVN  
Sbjct: 4   HDETGCQAP-EGPILCINNCGFFGSAATMNMCSKCHKDIILNQQQAQLAASSIESIVNGN 62

Query: 63  SSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGL 122
           SS NG E V A  VDVQA+ VE KIIS +PS AS  S+  E K KEGPSRC++C+KRVGL
Sbjct: 63  SSGNGKEPVVAGAVDVQAAPVEVKIISTEPSIAS--SKPSEMKAKEGPSRCTACRKRVGL 120

Query: 123 TGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
           TGF CRCGNL+C  HRYSDKH+CPFDYRTAARDAI KANPV+KAEKLDKI
Sbjct: 121 TGFGCRCGNLFCAIHRYSDKHDCPFDYRTAARDAIAKANPVVKAEKLDKI 170

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120188|ref|XP_002330986.1| predicted protein [Populus trichocarpa] gi|222872916|gb|EEF10047.1| predicted protein [Populus trichocarpa]

 Score =  261 bits (667), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 129/170 (75%), Positives = 142/170 (83%), Gaps = 2/170 (1%)

Query: 3   HDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNET 62
           HDETGCQAP EGPILCINNCGFFGS ATMNMCSKC+KDI+LKQ QA+LAASSI SIVN  
Sbjct: 4   HDETGCQAP-EGPILCINNCGFFGSAATMNMCSKCHKDIILKQQQAQLAASSIESIVNGN 62

Query: 63  SSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGL 122
           SS NG E V A  VDVQ++ VE KIIS +PS A+  S+  E K KEGPSRC+SC+KRVGL
Sbjct: 63  SSGNGKEPVVAVAVDVQSAPVEVKIISTEPSSATS-SKPSEMKAKEGPSRCTSCRKRVGL 121

Query: 123 TGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
           TGF CRCGNL+C  HRYSDKHNC FDYR AARDAI KANPV++AEKLDKI
Sbjct: 122 TGFSCRCGNLFCAVHRYSDKHNCRFDYRNAARDAIAKANPVVRAEKLDKI 171

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727441|ref|NP_001236393.1| uncharacterized protein LOC100500070 [Glycine max] gi|255628951|gb|ACU14820.1| unknown [Glycine max]

 Score =  260 bits (664), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 130/176 (73%), Positives = 145/176 (82%), Gaps = 4/176 (2%)

Query: 1   MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVN 60
           MDHD+TGCQAPPEGPILCINNCGFFGS ATMNMCSKC+KD++LKQ+QAKLAASSIG+I+N
Sbjct: 1   MDHDKTGCQAPPEGPILCINNCGFFGSAATMNMCSKCHKDMLLKQEQAKLAASSIGNIMN 60

Query: 61  ETSSSNGSE----SVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSC 116
            +SSS   E    + AAA VD+    VEPK +SVQP   S    S EAK K+GP RCSSC
Sbjct: 61  GSSSSTEKEPVVVAAAAANVDIPVIPVEPKTVSVQPLFGSGPEGSGEAKLKDGPKRCSSC 120

Query: 117 KKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
            KRVGLTGF CRCG+L+C  HRYSDKHNCPFDYRTAARDAI KANPV+KAEKLDKI
Sbjct: 121 NKRVGLTGFNCRCGDLFCAVHRYSDKHNCPFDYRTAARDAIAKANPVVKAEKLDKI 176

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557589|ref|XP_003547098.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8-like isoform 1 [Glycine max] gi|356557591|ref|XP_003547099.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8-like isoform 2 [Glycine max]

 Score =  260 bits (664), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 127/172 (73%), Positives = 145/172 (84%)

Query: 1   MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVN 60
           MDHD+TGC+APPEGPILCI NCGFFGS ATMNMCSKC+KD+MLKQ+QA L ASSIG+I+N
Sbjct: 1   MDHDKTGCEAPPEGPILCITNCGFFGSAATMNMCSKCHKDMMLKQEQAGLVASSIGNIMN 60

Query: 61  ETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRV 120
            +SSS+G+E   A +VDV  +S+EPKII  QP  AS   ES EAKPK+GP+RCS+C KRV
Sbjct: 61  GSSSSSGNEPAIATSVDVSVNSIEPKIIPAQPLVASGSEESDEAKPKDGPNRCSNCNKRV 120

Query: 121 GLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
           GLTGF CRCGNL+C  HRYSDKHNCPFDY TAARDAI KANP +K EKLDKI
Sbjct: 121 GLTGFNCRCGNLFCSVHRYSDKHNCPFDYHTAARDAIAKANPAVKVEKLDKI 172

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	172
TAIR|locus:2008251	173	AT1G51200 [Arabidopsis thalian	0.970	0.965	0.617	2.9e-55
TAIR|locus:2083208	170	AT3G52800 [Arabidopsis thalian	0.930	0.941	0.451	4e-35
TAIR|locus:2118036	175	SAP7 "stress-associated protei	0.936	0.92	0.4	2.8e-34
TAIR|locus:2049505	161	AT2G36320 [Arabidopsis thalian	0.924	0.987	0.431	1.5e-33
TAIR|locus:2034650	168	AT1G12440 [Arabidopsis thalian	0.906	0.928	0.416	1.1e-32
TAIR|locus:2042011	163	AT2G27580 [Arabidopsis thalian	0.895	0.944	0.405	9.8e-32
TAIR|locus:2132649	176	AT4G22820 [Arabidopsis thalian	0.976	0.954	0.356	1.9e-28
WB|WBGene00009050	189	F22D6.2.2 [Caenorhabditis eleg	0.389	0.354	0.567	1.7e-27
GENEDB_PFALCIPARUM|PF08_0056	191	PF08_0056 "zinc finger protein	0.674	0.607	0.350	3.6e-27
UNIPROTKB|Q8IB20	191	PF08_0056 "Zinc finger protein	0.674	0.607	0.350	3.6e-27

TAIR|locus:2008251 AT1G51200 [Arabidopsis thaliana (taxid:3702)]

 Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
 Identities = 110/178 (61%), Positives = 138/178 (77%)

Query:     1 MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQ-AKLAASSIGSIV 59
             MDHD+TGCQ+PPEGP LC NNCGFFGS ATMNMCSKC+KD++ +Q+Q AK A++  G+  
Sbjct:     1 MDHDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSGT-- 58

Query:    60 NETSSSNG-SESVAAATVDVQASSVEPKIISVQPSCASELSESVE----AKPKEGPSRCS 114
               +SSSN   E+  AA VD++  SVEP  +SVQPS    ++E V     AKPK GPSRC+
Sbjct:    59 --SSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPK-GPSRCT 115

Query:   115 SCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
             +C KRVGLTGFKCRCG+L+C +HRY+D H+C F+Y  AA++AI KANPV+KAEKLDKI
Sbjct:   116 TCNKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0007067 "mitosis" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

TAIR|locus:2083208 AT3G52800 [Arabidopsis thaliana (taxid:3702)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 80/177 (45%), Positives = 112/177 (63%)

Query:     4 DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETS 63
             +E  CQ P E   LC+NNCGF GS ATMN+CS CY D+ LKQ Q    +SSI S V E+S
Sbjct:     3 EEHRCQTP-ESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQQ---SSSIKSTV-ESS 57

Query:    64 SSNGSESVAAATVDVQASSVEPKIISVQPSCASELSE--------SVEAKPKEGPSRCSS 115
              S    S +++ +   +S + P ++   PS   E+ E        + E   ++ P+RC++
Sbjct:    58 LSVSPPSSSSSEI---SSPIIPPLLK-NPSVKLEVPEKKAVISLPTTEQNQQQRPNRCTT 113

Query:   116 CKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
             C+KRVGLTGFKCRCG ++C  HRY + H C +D+++A R+ I KANP++KA KL KI
Sbjct:   114 CRKRVGLTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2118036 SAP7 "stress-associated protein 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 66/165 (40%), Positives = 107/165 (64%)

Query:    11 PPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSES 70
             PP  P LC N CGFFGS + MN+CSKCY+ +  ++DQ  +A +++ + +   S S  +  
Sbjct:    12 PPTEPKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAAVKNSLKLPSCSIIAPG 71

Query:    71 VAAATVDVQASSVEPKIISVQPSC---ASELSESVEAKPKEGPSRCSSCKKRVGLTGFKC 127
                  ++++ + +E  +++ +PS    A+E  E+  ++P    +RC SC K+VG+ GFKC
Sbjct:    72 -QKHPLEIKPAHLETVVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVGVMGFKC 130

Query:   128 RCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
             +CG+ +C SHRY +KH C FD++   RDAI KANP++KA+K+ +I
Sbjct:   131 KCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQRI 175

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2049505 AT2G36320 [Arabidopsis thaliana (taxid:3702)]

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 73/169 (43%), Positives = 100/169 (59%)

Query:     4 DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETS 63
             +E  C+ P EG  LC+NNCGFFGS ATMN+CS CY D+ LKQ Q     S++ S ++   
Sbjct:     3 EEHRCETP-EGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVESSLSPVI 61

Query:    64 SSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLT 123
             +       A   +     + E K I + P+         +  P + P+RC+ C+KRVGLT
Sbjct:    62 APVLENYAAELEIPTTKKTEEKKPIQI-PT--------EQPSPPQRPNRCTVCRKRVGLT 112

Query:   124 GFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
             GF CRCG  +C SHRY + H C FD+++A R+ I KANP++ A KL KI
Sbjct:   113 GFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQKI 161

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2034650 AT1G12440 [Arabidopsis thaliana (taxid:3702)]

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 67/161 (41%), Positives = 93/161 (57%)

Query:    12 PEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESV 71
             P  P LC+  CGFFGS + MN+CSKCY+DI   ++Q   A +++   +N        +  
Sbjct:    13 PSEPKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLNPNKPKTQPQQS 72

Query:    72 AAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGN 131
                T  V  S           S A+ L       PK   +RC SC K+VG+TGFKCRCG+
Sbjct:    73 QEITQGVLGSGSSSSSTRGGDSAAAPLDP-----PKSTATRCLSCNKKVGVTGFKCRCGS 127

Query:   132 LYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
              +C +HRY + H C FD++  AR+AI KANPV+KA+K+D+I
Sbjct:   128 TFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVDRI 168

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2042011 AT2G27580 [Arabidopsis thaliana (taxid:3702)]

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 64/158 (40%), Positives = 100/158 (63%)

Query:    15 PILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAA 74
             P LC NNCGFFGS AT N+CSKC++D+  ++  +  A  ++   +    ++  S SV+  
Sbjct:    10 PRLCANNCGFFGSTATQNLCSKCFRDLQHQEQNSSTAKHALTQSLAAVGAA-ASSSVSPP 68

Query:    75 TVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYC 134
                  A S E      +   A+E  E  +  P++ P RC +C++RVG+TGF+CRCG ++C
Sbjct:    69 PPP-PADSKEIVEAKSEKRAAAE-PEEADGPPQD-PKRCLTCRRRVGITGFRCRCGFVFC 125

Query:   135 VSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
              +HRY+++H C FD++   +D I KANP++KA+KL+KI
Sbjct:   126 GTHRYAEQHECSFDFKRMGKDKIAKANPIVKADKLEKI 163

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2132649 AT4G22820 [Arabidopsis thaliana (taxid:3702)]

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 61/171 (35%), Positives = 96/171 (56%)

Query:     3 HDETG-CQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIG-SIVN 60
             +D T   Q+    P LC+  CGFFGS + M++CSKCY+ I  ++ Q  +A +++  S   
Sbjct:     6 NDSTSFTQSQASEPKLCVKGCGFFGSPSNMDLCSKCYRGICAEEAQTAVAKAAVEKSFKP 65

Query:    61 ETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRV 120
                 S       A  V+ +       ++S +PS +S + E+ E       +RC  C K+V
Sbjct:    66 SPPRSLFIAEPPAVVVEPKPEKAAVVVVSAEPS-SSAVPEANEPSRPARTNRCLCCNKKV 124

Query:   121 GLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 171
             G+ GFKC+CG+ +C  HRY + H+C FD++   R  I KANPV+KA+K+ +
Sbjct:   125 GIMGFKCKCGSTFCGEHRYPETHDCSFDFKEVGRGEIAKANPVVKADKIQR 175

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010200 "response to chitin" evidence=RCA

WB|WBGene00009050 F22D6.2.2 [Caenorhabditis elegans (taxid:6239)]

 Score = 226 (84.6 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
 Identities = 38/67 (56%), Positives = 47/67 (70%)

Query:   106 PKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIK 165
             P +  +RC  CKKRVGLTGF CRCG LYC  HRY   HNC FDY+T  R+ I K NPV+ 
Sbjct:   123 PVKKANRCHMCKKRVGLTGFSCRCGGLYCGDHRYDQAHNCQFDYKTMERETIRKNNPVVV 182

Query:   166 AEKLDKI 172
             ++K+ +I
Sbjct:   183 SDKVQRI 189

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GENEDB_PFALCIPARUM|PF08_0056 PF08_0056 "zinc finger protein, putative" [Plasmodium falciparum (taxid:5833)]

 Score = 207 (77.9 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
 Identities = 41/117 (35%), Positives = 61/117 (52%)

Query:    57 SIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEA-KPKEGPSRCSS 115
             + VNE  + N   S          ++ + K   +QP       E   + +P E  S+C  
Sbjct:    75 TFVNEKQTENEKNSYIKEENSSIINNEQNKESEMQPVTLDNTEEKDNSSQPVEDKSKCFF 134

Query:   116 CKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
             C KR+GL G KCRC + +C  HRY+D HNC FDY+   +  +IK N  + A+K++KI
Sbjct:   135 CSKRIGLVGIKCRCNHYFCSLHRYADAHNCTFDYKNYHKQQLIKNNVKVVADKVEKI 191

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q8IB20 PF08_0056 "Zinc finger protein, putative" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 207 (77.9 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
 Identities = 41/117 (35%), Positives = 61/117 (52%)

Query:    57 SIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEA-KPKEGPSRCSS 115
             + VNE  + N   S          ++ + K   +QP       E   + +P E  S+C  
Sbjct:    75 TFVNEKQTENEKNSYIKEENSSIINNEQNKESEMQPVTLDNTEEKDNSSQPVEDKSKCFF 134

Query:   116 CKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 172
             C KR+GL G KCRC + +C  HRY+D HNC FDY+   +  +IK N  + A+K++KI
Sbjct:   135 CSKRIGLVGIKCRCNHYFCSLHRYADAHNCTFDYKNYHKQQLIKNNVKVVADKVEKI 191

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A2YEZ6	SAP8_ORYSI	No assigned EC number	0.6781	0.9825	0.9883	N/A	no
Q8H0X0	SAP2_ARATH	No assigned EC number	0.6101	0.9767	0.9710	yes	no
A3BDI8	SAP8_ORYSJ	No assigned EC number	0.6781	0.9825	0.9883	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_kg.C_LG_III0059 SubName- Full=Putative uncharacterized protein; (172 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	172
smart00154	39	smart00154, ZnF_AN1, AN1-like Zinc finger	8e-13
pfam01428	43	pfam01428, zf-AN1, AN1-like Zinc finger	9e-09
pfam01754	25	pfam01754, zf-A20, A20-like zinc finger	6e-08
smart00259	26	smart00259, ZnF_A20, A20-like zinc fingers	3e-04

>gnl|CDD|197545 smart00154, ZnF_AN1, AN1-like Zinc finger

 Score = 59.3 bits (144), Expect = 8e-13
 Identities = 24/39 (61%), Positives = 30/39 (76%), Gaps = 1/39 (2%)

Query: 113 CSSCKKRVGLTGFKCR-CGNLYCVSHRYSDKHNCPFDYR 150
           C  C+K+VGLTGFKCR CGNL+C  HR  + H+CP DY+
Sbjct: 1   CHFCRKKVGLTGFKCRHCGNLFCGEHRLPEDHDCPGDYK 39

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. Length = 39

>gnl|CDD|201791 pfam01428, zf-AN1, AN1-like Zinc finger

 Score = 48.6 bits (116), Expect = 9e-09
 Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 2/39 (5%)

Query: 116 CKKRVGLTGFKCR-CGNLYCVSHRYSDKHNCPFDYRTAA 153
           CKK+  L  FKCR CG  +C+ HR  + HNCP  Y++ A
Sbjct: 6   CKKKDFL-PFKCRFCGGTFCLKHRLPEDHNCPGLYKSKA 43

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. The following pattern describes the zinc finger. C-X2-C-X(9-12)-C-X(1-2)-C-X4-C-X2-H-X5-H-X-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Length = 43

>gnl|CDD|201955 pfam01754, zf-A20, A20-like zinc finger

 Score = 46.0 bits (110), Expect = 6e-08
 Identities = 14/25 (56%), Positives = 18/25 (72%)

Query: 15 PILCINNCGFFGSVATMNMCSKCYK 39
          P+ C   CGF+GS AT  +CSKCY+
Sbjct: 1  PLKCTPGCGFYGSPATEGLCSKCYR 25

The A20 Zn-finger of bovine/human Rabex5/rabGEF1 is a Ubiquitin Binding Domain. The zinc finger mediates self-association in A20. These fingers also mediate IL-1-induced NF-kappa B activation. Length = 25

>gnl|CDD|128555 smart00259, ZnF_A20, A20-like zinc fingers

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 1/26 (3%)

Query: 15 PILC-INNCGFFGSVATMNMCSKCYK 39
          PI C    CGFFG+ AT  +CSKC+K
Sbjct: 1  PIKCRRPGCGFFGNPATEGLCSKCFK 26

A20- (an inhibitor of cell death)-like zinc fingers. The zinc finger mediates self-association in A20. These fingers also mediate IL-1-induced NF-kappaB activation. Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	172
KOG3173	167	consensus Predicted Zn-finger protein [General fun	100.0
smart00154	39	ZnF_AN1 AN1-like Zinc finger. Zinc finger at the C	99.55
PF01754	25	zf-A20: A20-like zinc finger; InterPro: IPR002653	99.54
smart00259	26	ZnF_A20 A20-like zinc fingers. A20- (an inhibitor	99.47
PF01428	43	zf-AN1: AN1-like Zinc finger; InterPro: IPR000058	99.07
COG3582	162	Predicted nucleic acid binding protein containing	96.56
KOG3183	250	consensus Predicted Zn-finger protein [General fun	96.47
PF01363	69	FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc f	94.69
cd00065	57	FYVE FYVE domain; Zinc-binding domain; targets pro	93.08
KOG3183	250	consensus Predicted Zn-finger protein [General fun	93.06
smart00064	68	FYVE Protein present in Fab1, YOTB, Vac1, and EEA1	92.73
KOG1818	634	consensus Membrane trafficking and cell signaling	90.17
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	87.84
PF15135	278	UPF0515: Uncharacterised protein UPF0515	83.31
PF00130	53	C1_1: Phorbol esters/diacylglycerol binding domain	82.98

>KOG3173 consensus Predicted Zn-finger protein [General function prediction only]

Probab=100.00  E-value=1.7e-47  Score=309.70  Aligned_cols=164  Identities=45%  Similarity=0.856  Sum_probs=110.5

Q ss_pred             CCCCccCCCCCCCCccccccCCCCCCccccCCcchhhhHHHHHHHhhhh-hhhhcccccccCCCCCCCCCcccccccccc
Q 030726            1 MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAK-LAASSIGSIVNETSSSNGSESVAAATVDVQ   79 (172)
Q Consensus         1 M~~~~~~~q~~~e~p~lC~n~CGFfGs~at~n~CSkCyr~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (172)
                      |+++....+.+++.++||+|||||||+|+|+||||+||++++.++++.. .....+..-+. .+.+   .+.    ....
T Consensus         1 M~~e~~~~~~~~~~~~lc~~gCGf~G~p~~~n~CSkC~~e~~~~~~~~~~~~~~~~~~~~~-~~~s---~~~----~~~~   72 (167)
T KOG3173|consen    1 MASETNGSQTPPSQDLLCVNGCGFYGSPATENLCSKCYRDHLLRQQQKQARASPPVESSLS-SPRS---VPS----RDPP   72 (167)
T ss_pred             CcccccCCCCCCccccccccCccccCChhhccHHHHHHHHHHHHhhhccccccCccccccc-Cccc---cCc----cccc
Confidence            6766555555344579999999999999999999999999998876652 22211111000 0000   110    0000


Q ss_pred             cCCCCcccc-cccCC-CCCCCcccccCCCCCCCCCcccccccccccceeeecCCccccCCCCCCCCCCcccchHHHHHHH
Q 030726           80 ASSVEPKII-SVQPS-CASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAI  157 (172)
Q Consensus        80 ~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l  157 (172)
                      ....+.+.. +...+ ..+...+.........++||+.|+|||||+||.||||++||+.|||+|.|+|+||||.+||+.|
T Consensus        73 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~rC~~C~kk~gltgf~CrCG~~fC~~HRy~e~H~C~fDyK~~gr~~i  152 (167)
T KOG3173|consen   73 AVSLESTTESELKLVSDTPSTEEEDEESKPKKKKRCFKCRKKVGLTGFKCRCGNTFCGTHRYPEQHDCSFDYKQAGREKI  152 (167)
T ss_pred             cccccccccccccccccCCcccccccccccccchhhhhhhhhhcccccccccCCcccccccCCccccccccHHHHHHHHH
Confidence            000110000 00000 0011111222334556889999999999999999999999999999999999999999999999


Q ss_pred             HHhCCcccccccccC
Q 030726          158 IKANPVIKAEKLDKI  172 (172)
Q Consensus       158 ~k~Np~v~~~Kl~kI  172 (172)
                      +++||+|+++||+||
T Consensus       153 ~k~nP~v~a~k~~ki  167 (167)
T KOG3173|consen  153 AKANPVVKADKLQKI  167 (167)
T ss_pred             HHhCCeeeccccccC
Confidence            999999999999998

>smart00154 ZnF_AN1 AN1-like Zinc finger

Probab=99.55  E-value=1.9e-15  Score=96.16  Aligned_cols=38  Identities=63%  Similarity=1.481  Sum_probs=36.9

Q ss_pred             cccccccccccceeee-cCCccccCCCCCCCCCCcccch
Q 030726          113 CSSCKKRVGLTGFKCR-CGNLYCVSHRYSDKHNCPFDYR  150 (172)
Q Consensus       113 C~~C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  150 (172)
                      |+.|+++++|++|+|+ |+++||..|||+|.|+|++|||
T Consensus         1 C~~C~~~~~l~~f~C~~C~~~FC~~HR~~e~H~C~~~~k   39 (39)
T smart00154        1 CHFCRKKVGLTGFKCRHCGNLFCGEHRLPEDHDCPGDYK   39 (39)
T ss_pred             CcccCCcccccCeECCccCCccccccCCccccCCccccC
Confidence            7899999999999999 9999999999999999999996

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis.

>PF01754 zf-A20: A20-like zinc finger; InterPro: IPR002653 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.54  E-value=2.8e-15  Score=87.45  Aligned_cols=25  Identities=64%  Similarity=1.420  Sum_probs=20.8

Q ss_pred             ccccccCCCCCCccccCCcchhhhH
Q 030726           15 PILCINNCGFFGSVATMNMCSKCYK   39 (172)
Q Consensus        15 p~lC~n~CGFfGs~at~n~CSkCyr   39 (172)
                      |.+|++|||||||++|+||||+|||
T Consensus         1 ~~~C~~gCgf~Gs~~~~~~Cs~C~~   25 (25)
T PF01754_consen    1 PSLCANGCGFYGSPATNGLCSKCYR   25 (25)
T ss_dssp             SSB-TTTSSSB-BGGGTTS-HHHHH
T ss_pred             CCcccCCCCCcccccccCcchhhcC
Confidence            5799999999999999999999997

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the zinc finger domain found in A20. A20 is an inhibitor of cell death that inhibits NF-kappaB activation via the tumour necrosis factor receptor associated factor pathway []. The zinc finger domains appear to mediate self-association in A20. These fingers also mediate IL-1-induced NF-kappa B activation. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding, 0008270 zinc ion binding; PDB: 2FIF_F 2FID_B 2C7N_C 2C7M_A 2L00_A 2KZY_A 2EQG_A 2EQE_A 3OJ3_J 3OJ4_C ....

>smart00259 ZnF_A20 A20-like zinc fingers

Probab=99.47  E-value=1.2e-14  Score=85.54  Aligned_cols=25  Identities=60%  Similarity=1.314  Sum_probs=23.3

Q ss_pred             ccccc-cCCCCCCccccCCcchhhhH
Q 030726           15 PILCI-NNCGFFGSVATMNMCSKCYK   39 (172)
Q Consensus        15 p~lC~-n~CGFfGs~at~n~CSkCyr   39 (172)
                      |.+|+ +||||||||+|+||||||||
T Consensus         1 ~~~C~~~~CgF~G~~~t~~~CskCy~   26 (26)
T smart00259        1 PIKCRRPGCGFFGNPATEGLCSKCFK   26 (26)
T ss_pred             CCccccCCCCCcCChhhcccCHhhcC
Confidence            45899 99999999999999999996

A20- (an inhibitor of cell death)-like zinc fingers. The zinc finger mediates self-association in A20. These fingers also mediate IL-1-induced NF-kappaB activation.

>PF01428 zf-AN1: AN1-like Zinc finger; InterPro: IPR000058 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.07  E-value=4.1e-11  Score=77.18  Aligned_cols=38  Identities=42%  Similarity=0.964  Sum_probs=28.0

Q ss_pred             ccc--ccccccccceeee-cCCccccCCCCCCCCCCcccchH
Q 030726          113 CSS--CKKRVGLTGFKCR-CGNLYCVSHRYSDKHNCPFDYRT  151 (172)
Q Consensus       113 C~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~  151 (172)
                      |..  |++++. ++|.|+ |+..||..|||++.|+|+++++.
T Consensus         1 C~~~~C~~~~~-~~~~C~~C~~~FC~~Hr~~e~H~C~~~~~~   41 (43)
T PF01428_consen    1 CSFPGCKKKDF-LPFKCKHCGKSFCLKHRLPEDHNCSKLQKK   41 (43)
T ss_dssp             -SSTTT--BCT-SHEE-TTTS-EE-TTTHSTTTCT-SSTTSC
T ss_pred             CccCcCcCccC-CCeECCCCCcccCccccCccccCCcchhhc
Confidence            455  998887 799999 99999999999999999999874

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the AN1-type zinc finger domain, which has a dimetal (zinc)-bound alpha/beta fold. This domain was first identified as a zinc finger at the C terminus of AN1 Q91889 from SWISSPROT, a ubiquitin-like protein in Xenopus laevis []. The AN1-type zinc finger contains six conserved cysteines and two histidines that could potentially coordinate 2 zinc atoms. Certain stress-associated proteins (SAP) contain AN1 domain, often in combination with A20 zinc finger domains (SAP8) or C2H2 domains (SAP16) []. For example, the human protein Znf216 has an A20 zinc-finger at the N terminus and an AN1 zinc-finger at the C terminus, acting to negatively regulate the NFkappaB activation pathway and to interact with components of the immune response like RIP, IKKgamma and TRAF6. The interact of Znf216 with IKK-gamma and RIP is mediated by the A20 zinc-finger domain, while its interaction with TRAF6 is mediated by the AN1 zinc-finger domain; therefore, both zinc-finger domains are involved in regulating the immune response []. The AN1 zinc finger domain is also found in proteins containing a ubiquitin-like domain, which are involved in the ubiquitination pathway []. Proteins containing an AN1-type zinc finger include: Ascidian posterior end mark 6 (pem-6) protein []. Human AWP1 protein (associated with PRK1), which is expressed during early embryogenesis []. Human immunoglobulin mu binding protein 2 (SMUBP-2), mutations in which cause muscular atrophy with respiratory distress type 1 []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 1WFP_A 1WYS_A 1WG2_A 1WFH_A 1X4W_A 1WFE_A 1WFL_A 1X4V_A.

>COG3582 Predicted nucleic acid binding protein containing the AN1-type Zn-finger [General function prediction only]

Probab=96.56  E-value=0.0011  Score=54.22  Aligned_cols=38  Identities=26%  Similarity=0.505  Sum_probs=30.0

Q ss_pred             Ccccccccccccceeee-cCCccccCCCCCCCCCCcccch
Q 030726          112 RCSSCKKRVGLTGFKCR-CGNLYCVSHRYSDKHNCPFDYR  150 (172)
Q Consensus       112 rC~~C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  150 (172)
                      +|..|++..+| .++|- |++.||+.||+++.|+|.+...
T Consensus        99 ~~~~~g~~s~l-~~~c~~c~g~fc~~h~lp~nhdc~~L~s  137 (162)
T COG3582          99 TPQCTGKGSTL-AGKCNYCTGYFCAEHRLPENHDCNGLGS  137 (162)
T ss_pred             cceeccCCccc-cccccCCCCcceeceecccccccccHHH
Confidence            34455555444 58997 9999999999999999998655

>KOG3183 consensus Predicted Zn-finger protein [General function prediction only]

Probab=96.47  E-value=0.001  Score=57.48  Aligned_cols=40  Identities=38%  Similarity=1.013  Sum_probs=35.1

Q ss_pred             CCcc--cccccccccceeee-cCCccccCCCCCCCCCCcccchH
Q 030726          111 SRCS--SCKKRVGLTGFKCR-CGNLYCVSHRYSDKHNCPFDYRT  151 (172)
Q Consensus       111 ~rC~--~C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~  151 (172)
                      ..|.  .|+ .|.++.|+|- |+.+||..||--+.|+|.+-|..
T Consensus         9 kHCs~~~Ck-qlDFLPf~Cd~C~~~FC~eHrsye~H~Cp~~~~~   51 (250)
T KOG3183|consen    9 KHCSVPYCK-QLDFLPFKCDGCSGIFCLEHRSYESHHCPKGLRI   51 (250)
T ss_pred             cccCcchhh-hccccceeeCCccchhhhccchHhhcCCCccccc
Confidence            4677  787 5799999996 99999999999999999988764

>PF01363 FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=94.69  E-value=0.015  Score=39.71  Aligned_cols=29  Identities=38%  Similarity=0.863  Sum_probs=17.5

Q ss_pred             CCCCccccccccccc--ceeee-cCCccccCC
Q 030726          109 GPSRCSSCKKRVGLT--GFKCR-CGNLYCVSH  137 (172)
Q Consensus       109 ~~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  137 (172)
                      ....|..|+++.+|+  -..|| ||.+||+.+
T Consensus         8 ~~~~C~~C~~~F~~~~rrhhCr~CG~~vC~~C   39 (69)
T PF01363_consen    8 EASNCMICGKKFSLFRRRHHCRNCGRVVCSSC   39 (69)
T ss_dssp             G-SB-TTT--B-BSSS-EEE-TTT--EEECCC
T ss_pred             CCCcCcCcCCcCCCceeeEccCCCCCEECCch
Confidence            357899999999997  49999 999999754

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The FYVE zinc finger is named after four proteins that it has been found in: Fab1, YOTB/ZK632.12, Vac1, and EEA1. The FYVE finger has been shown to bind two zinc ions []. The FYVE finger has eight potential zinc coordinating cysteine positions. Many members of this family also include two histidines in a motif R+HHC+XCG, where + represents a charged residue and X any residue. FYVE-type domains are divided into two known classes: FYVE domains that specifically bind to phosphatidylinositol 3-phosphate in lipid bilayers and FYVE-related domains of undetermined function []. Those that bind to phosphatidylinositol 3-phosphate are often found in proteins targeted to lipid membranes that are involved in regulating membrane traffic [, , ]. Most FYVE domains target proteins to endosomes by binding specifically to phosphatidylinositol-3-phosphate at the membrane surface. By contrast, the CARP2 FYVE-like domain is not optimized to bind to phosphoinositides or insert into lipid bilayers. FYVE domains are distinguished from other zinc fingers by three signature sequences: an N-terminal WxxD motif, a basic R(R/K)HHCR patch, and a C-terminal RVC motif. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0046872 metal ion binding; PDB: 1HYI_A 1JOC_B 1HYJ_A 1DVP_A 3ZYQ_A 4AVX_A 1VFY_A 3T7L_A 1X4U_A 1WFK_A ....

>cd00065 FYVE FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with phosphatidylinositol-3-phosphate, PI3P; present in Fab1, YOTB, Vac1, and EEA1;

Probab=93.08  E-value=0.041  Score=36.02  Aligned_cols=27  Identities=41%  Similarity=1.011  Sum_probs=23.5

Q ss_pred             CCccccccccccc--ceeee-cCCccccCC
Q 030726          111 SRCSSCKKRVGLT--GFKCR-CGNLYCVSH  137 (172)
Q Consensus       111 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  137 (172)
                      ..|..|+++++++  ...|| ||.+||..+
T Consensus         3 ~~C~~C~~~F~~~~rk~~Cr~Cg~~~C~~C   32 (57)
T cd00065           3 SSCMGCGKPFTLTRRRHHCRNCGRIFCSKC   32 (57)
T ss_pred             CcCcccCccccCCccccccCcCcCCcChHH
Confidence            5799999999996  69998 999999754

>KOG3183 consensus Predicted Zn-finger protein [General function prediction only]

Probab=93.06  E-value=0.022  Score=49.41  Aligned_cols=41  Identities=34%  Similarity=0.826  Sum_probs=34.9

Q ss_pred             CCCCCCCcc--ccccccccc-ceeee-cCCccccCCCCCCCCCCc
Q 030726          106 PKEGPSRCS--SCKKRVGLT-GFKCR-CGNLYCVSHRYSDKHNCP  146 (172)
Q Consensus       106 ~~~~~~rC~--~C~kkvgl~-gf~Cr-Cg~~FC~~HRy~e~H~C~  146 (172)
                      .+...++|.  .|+|++-|. .+.|+ ||..||-+||++-.|.|.
T Consensus        94 ~k~~t~kc~~~~c~k~~~~~~~~~c~~c~~~~c~khr~~~dhsc~  138 (250)
T KOG3183|consen   94 RKVFTNKCPVPRCKKTLTLANKITCSKCGRNFCLKHRHPLDHSCN  138 (250)
T ss_pred             cccccccCCchhhHHHHHHHHhhhhHhhcchhhhhccCCCCchhh
Confidence            445567777  788888875 69998 999999999999999998

>smart00064 FYVE Protein present in Fab1, YOTB, Vac1, and EEA1

Probab=92.73  E-value=0.063  Score=36.50  Aligned_cols=28  Identities=39%  Similarity=0.993  Sum_probs=23.9

Q ss_pred             CCCccccccccccc--ceeee-cCCccccCC
Q 030726          110 PSRCSSCKKRVGLT--GFKCR-CGNLYCVSH  137 (172)
Q Consensus       110 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  137 (172)
                      ...|..|+++.+++  ...|| ||.+||+.+
T Consensus        10 ~~~C~~C~~~F~~~~rk~hCr~CG~i~C~~C   40 (68)
T smart00064       10 VSNCMGCGKEFNLTKRRHHCRNCGRIFCSKC   40 (68)
T ss_pred             CCcCcccCccccCcccccccccCCCCcChHH
Confidence            35799999999986  58898 999999754

The FYVE zinc finger is named after four proteins where it was first found: Fab1, YOTB/ZK632.12, Vac1, and EEA1. The FYVE finger has been shown to bind two Zn2+ ions. The FYVE finger has eight potential zinc coordinating cysteine positions. The FYVE finger is structurally related to the

>KOG1818 consensus Membrane trafficking and cell signaling protein HRS, contains VHS and FYVE domains [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=90.17  E-value=0.11  Score=50.52  Aligned_cols=46  Identities=28%  Similarity=0.707  Sum_probs=35.9

Q ss_pred             CCCCcccccccccccc--eeee-cCCccccCCC-----------CCCCCCCcccchHHHH
Q 030726          109 GPSRCSSCKKRVGLTG--FKCR-CGNLYCVSHR-----------YSDKHNCPFDYRTAAR  154 (172)
Q Consensus       109 ~~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~HR-----------y~e~H~C~fDyk~~~r  154 (172)
                      ....|..|+.+.|+++  ..|| ||.+||+.|=           |-+.--|..||...-|
T Consensus       164 D~~~C~rCr~~F~~~~rkHHCr~CG~vFC~qcss~s~~lP~~Gi~~~VRVCd~C~E~l~~  223 (634)
T KOG1818|consen  164 DSEECLRCRVKFGLTNRKHHCRNCGQVFCGQCSSKSLTLPKLGIEKPVRVCDSCYELLTR  223 (634)
T ss_pred             cccccceeeeeeeeccccccccccchhhccCccccccCcccccccccceehhhhHHHhhh
Confidence            3578999999999985  8999 9999999874           3455667777764433

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=87.84  E-value=0.27  Score=28.72  Aligned_cols=23  Identities=26%  Similarity=0.655  Sum_probs=20.5

Q ss_pred             CCcccccccccccceeee-cCCcc
Q 030726          111 SRCSSCKKRVGLTGFKCR-CGNLY  133 (172)
Q Consensus       111 ~rC~~C~kkvgl~gf~Cr-Cg~~F  133 (172)
                      .+|-.|++.|.+..-.|- ||+.|
T Consensus         1 K~CP~C~~~V~~~~~~Cp~CG~~F   24 (26)
T PF10571_consen    1 KTCPECGAEVPESAKFCPHCGYDF   24 (26)
T ss_pred             CcCCCCcCCchhhcCcCCCCCCCC
Confidence            368999999999999997 99887

Several members are annotated as putative helicases.

>PF15135 UPF0515: Uncharacterised protein UPF0515

Probab=83.31  E-value=0.65  Score=40.86  Aligned_cols=30  Identities=33%  Similarity=0.868  Sum_probs=24.1

Q ss_pred             CCCCCCCccccccc---------ccccceee-ecCCcccc
Q 030726          106 PKEGPSRCSSCKKR---------VGLTGFKC-RCGNLYCV  135 (172)
Q Consensus       106 ~~~~~~rC~~C~kk---------vgl~gf~C-rCg~~FC~  135 (172)
                      ..+..+||..|+||         .|+.-|+| .|+++|=+
T Consensus       128 ~rKeVSRCr~C~~rYDPVP~dkmwG~aef~C~~C~h~F~G  167 (278)
T PF15135_consen  128 QRKEVSRCRKCRKRYDPVPCDKMWGIAEFHCPKCRHNFRG  167 (278)
T ss_pred             cccccccccccccccCCCccccccceeeeecccccccchh
Confidence            34557899999988         67778999 59999954

>PF00130 C1_1: Phorbol esters/diacylglycerol binding domain (C1 domain); InterPro: IPR002219 Diacylglycerol (DAG) is an important second messenger

Probab=82.98  E-value=0.71  Score=29.72  Aligned_cols=24  Identities=38%  Similarity=1.079  Sum_probs=18.3

Q ss_pred             CCCCcccccccc---cccceeee-cCCc
Q 030726          109 GPSRCSSCKKRV---GLTGFKCR-CGNL  132 (172)
Q Consensus       109 ~~~rC~~C~kkv---gl~gf~Cr-Cg~~  132 (172)
                      .+..|..|++.|   ++.|++|+ |+.+
T Consensus        10 ~~~~C~~C~~~i~g~~~~g~~C~~C~~~   37 (53)
T PF00130_consen   10 KPTYCDVCGKFIWGLGKQGYRCSWCGLV   37 (53)
T ss_dssp             STEB-TTSSSBECSSSSCEEEETTTT-E
T ss_pred             CCCCCcccCcccCCCCCCeEEECCCCCh
Confidence            467899999999   56799998 8765

Phorbol esters (PE) are analogues of DAG and potent tumour promoters that cause a variety of physiological changes when administered to both cells and tissues. DAG activates a family of serine/threonine protein kinases, collectively known as protein kinase C (PKC) []. Phorbol esters can directly stimulate PKC. The N-terminal region of PKC, known as C1, has been shown [] to bind PE and DAG in a phospholipid and zinc-dependent fashion. The C1 region contains one or two copies (depending on the isozyme of PKC) of a cysteine-rich domain, which is about 50 amino-acid residues long, and which is essential for DAG/PE-binding. The DAG/PE-binding domain binds two zinc ions; the ligands of these metal ions are probably the six cysteines and two histidines that are conserved in this domain.; GO: 0035556 intracellular signal transduction; PDB: 1RFH_A 2FNF_X 3PFQ_A 1PTQ_A 1PTR_A 2VRW_B 1XA6_A 2ENN_A 1TBN_A 1TBO_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	172
1wfl_A	74	Solution Structure Of The Zf-An1 Domain From Mouse		7e-15
1wfh_A	64	Solution Structrue Of The Zf-An1 Domain From Arabid		1e-11
1wfp_A	74	Solution Structure Of The Zf-an1 Domain From Arabio		2e-11
1wff_A	85	Solution Structure Of The Zf-An1 Domain From Mouse		6e-11
1wg2_A	64	Solution Structure Of Zf-An1 Domain From Arabidopsi		9e-10
2kzy_A	62	Solution Nmr Structure Of The Znf216 A20 Zinc Finge		2e-04

>pdb|1WFL|A Chain A, Solution Structure Of The Zf-An1 Domain From Mouse Zinc Finger Protein 216 Length = 74

Iteration: 1
 Score = 76.6 bits (187), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 33/54 (61%), Positives = 39/54 (72%)
Query: 100 ESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAA 153
           E     PK   +RC  C+K+VGLTGF CRCGNL+C  HRYSDKHNCP+DY+  A
Sbjct: 15  EKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEA 68

>pdb|1WFH|A Chain A, Solution Structrue Of The Zf-An1 Domain From Arabidopsis Thaliana At2g36320 Protein Length = 64

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 110 PSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAA 153
           P+RC+ C+KRVGLTGF CRCG  +C SHRY + H C FD+++A 
Sbjct: 15  PNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAG 58

>pdb|1WFP|A Chain A, Solution Structure Of The Zf-an1 Domain From Arabiopsis Thaliana F5o11.17 Protein Length = 74

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 35/48 (72%)
Query: 106 PKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAA 153
           PK   +RC SC K+VG+TGFKCRCG+ +C +HRY + H C FD++  A
Sbjct: 21  PKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVA 68

>pdb|1WFF|A Chain A, Solution Structure Of The Zf-An1 Domain From Mouse Riken Cdna 2810002d23 Protein Length = 85

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 112 RCSSCKKRVGL-TGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPV 163
            C  C K+ GL T F+CRCGN +C SHRY++ H C +DY++A R  + +ANPV
Sbjct: 27  HCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPV 79

>pdb|1WG2|A Chain A, Solution Structure Of Zf-An1 Domain From Arabidopsis Thaliana Length = 64

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 105 KPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAA 153
           +P    +RC SC K+VG+ GFKC+CG+ +C SHRY +KH C FD++   
Sbjct: 10  RPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVG 58

>pdb|2KZY|A Chain A, Solution Nmr Structure Of The Znf216 A20 Zinc Finger Length = 62

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 14 GPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQA 48
          GP+LC   CGF+G+  T  MCS CYK+ + +Q  +
Sbjct: 12 GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS 46

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	172
1wff_A	85	Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc	1e-27
1wfh_A	64	Zinc finger (AN1-like) family protein; ZF-AN1 doma	4e-26
1wfp_A	74	Zinc finger (AN1-like) family protein; ZF-AN1 doma	4e-26
1wg2_A	64	Zinc finger (AN1-like) family protein; riken struc	1e-25
1wfl_A	74	Zinc finger protein 216; ZF-AN1 domain, zinc bindi	5e-24
1x4w_A	67	Hypothetical protein FLJ13222; ZF-AN1 domain, zinc	6e-21
2c7n_A	74	Rabex-5, GEF 1, RAB guanine nucleotide exchange fa	5e-14
2kzy_A	62	ZNF216-A20, zfand5 protein (zinc finger protein 21	5e-13

>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1 Length = 85

 Score = 98.1 bits (244), Expect = 1e-27
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)

Query: 100 ESVEAKPKEGPSRCSSCKKRVGL-TGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAII 158
           ++     K+    C  C K+ GL T F+CRCGN +C SHRY++ H C +DY++A R  + 
Sbjct: 15  KAPLQTKKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLE 74

Query: 159 KANPVIKA 166
           +ANPV   
Sbjct: 75  EANPVSGP 82

>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 64

 Score = 93.7 bits (233), Expect = 4e-26
 Identities = 28/59 (47%), Positives = 38/59 (64%)

Query: 99  SESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAI 157
             S +  P + P+RC+ C+KRVGLTGF CRCG  +C SHRY + H C FD+++A     
Sbjct: 4   GSSGQPSPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPS 62

>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 74

 Score = 93.8 bits (233), Expect = 4e-26
 Identities = 26/66 (39%), Positives = 39/66 (59%)

Query: 92  PSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRT 151
            +   + + +    PK   +RC SC K+VG+TGFKCRCG+ +C +HRY + H C FD++ 
Sbjct: 7   GTRGGDSAAAPLDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKG 66

Query: 152 AARDAI 157
            A    
Sbjct: 67  VASGPS 72

>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 64

 Score = 92.6 bits (230), Expect = 1e-25
 Identities = 25/59 (42%), Positives = 36/59 (61%)

Query: 99  SESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAI 157
             S  ++P    +RC SC K+VG+ GFKC+CG+ +C SHRY +KH C FD++       
Sbjct: 4   GSSGPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGSGPS 62

>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1 Length = 74

 Score = 88.5 bits (219), Expect = 5e-24
 Identities = 34/68 (50%), Positives = 42/68 (61%)

Query: 89  SVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFD 148
                 +S+  E     PK   +RC  C+K+VGLTGF CRCGNL+C  HRYSDKHNCP+D
Sbjct: 4   GSSGPSSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYD 63

Query: 149 YRTAARDA 156
           Y+  A   
Sbjct: 64  YKAEASGP 71

>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 67

 Score = 80.4 bits (198), Expect = 6e-21
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 3/62 (4%)

Query: 99  SESVEAKPKEGPSRCSSCKKRVGLTGFK---CRCGNLYCVSHRYSDKHNCPFDYRTAARD 155
             S     ++   RC  C+ ++ L   +   CRCG ++C+ HR  ++H+C FD+      
Sbjct: 4   GSSGSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGSG 63

Query: 156 AI 157
             
Sbjct: 64  PS 65

>2c7n_A Rabex-5, GEF 1, RAB guanine nucleotide exchange factor 1; protein-binding, ubiquitin binding domain, endocytosis, NUCL protein, polyprotein; 2.1A {Homo sapiens} SCOP: g.39.1.15 PDB: 2c7m_A 2fif_B 2fid_B Length = 74

 Score = 62.6 bits (151), Expect = 5e-14
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 1  MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASS 54
          +  +  G     +  +LC   CG++G+ A    CSKC+++   K  Q ++    
Sbjct: 3  LKSERRGIHVD-QSDLLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDW 55

>2kzy_A ZNF216-A20, zfand5 protein (zinc finger protein 216 (predicte isoform CRA_A); A20 domain, atrogene, metal binding Pro; NMR {Rattus norvegicus} PDB: 2l00_A Length = 62

 Score = 59.7 bits (144), Expect = 5e-13
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 9  QAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSS 65
               GP+LC   CGF+G+  T  MCS CYK+  L++ Q     S +G+     S +
Sbjct: 7  TNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKE-HLQRQQNSGRMSPMGTASGSNSPT 62

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	172
1wff_A	85	Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc	99.96
1wfh_A	64	Zinc finger (AN1-like) family protein; ZF-AN1 doma	99.93
1wg2_A	64	Zinc finger (AN1-like) family protein; riken struc	99.92
1wfl_A	74	Zinc finger protein 216; ZF-AN1 domain, zinc bindi	99.92
1wfp_A	74	Zinc finger (AN1-like) family protein; ZF-AN1 doma	99.91
1x4w_A	67	Hypothetical protein FLJ13222; ZF-AN1 domain, zinc	99.9
2kzy_A	62	ZNF216-A20, zfand5 protein (zinc finger protein 21	99.77
2c7n_A	74	Rabex-5, GEF 1, RAB guanine nucleotide exchange fa	99.71
3oj3_I	49	Tumor necrosis factor alpha-induced protein 3; ubi	99.57
1wfe_A	86	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	99.35
1x4v_A	63	Hypothetical protein LOC130617; ZF-AN1 domain, zin	99.31
1wys_A	75	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	99.24
2eqe_A	48	Tumor necrosis factor, alpha-induced protein 3; ZF	97.9
1vfy_A	73	Phosphatidylinositol-3-phosphate binding FYVE doma	94.17
1wfk_A	88	Zinc finger, FYVE domain containing 19; riken stru	94.04
2yw8_A	82	RUN and FYVE domain-containing protein 1; structur	93.83
1x4u_A	84	Zinc finger, FYVE domain containing 27 isoform B;	93.61
1z2q_A	84	LM5-1; membrane protein, FYVE domain, zinc-finger;	93.38
1joc_A	125	EEA1, early endosomal autoantigen 1; FYVE domain,	93.17
1dvp_A	220	HRS, hepatocyte growth factor-regulated tyrosine k	92.35
3zyq_A	226	Hepatocyte growth factor-regulated tyrosine kinas	91.1
3t7l_A	90	Zinc finger FYVE domain-containing protein 16; str	91.05
1y02_A	120	CARP2, FYVE-ring finger protein sakura; zinc-bindi	89.51
2eqf_A	46	Tumor necrosis factor, alpha-induced protein 3; ZF	84.17
2vrw_B	406	P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP	83.69
3mpx_A	434	FYVE, rhogef and PH domain-containing protein 5; s	81.56
4b6d_A	61	RAC GTPase-activating protein 1; signaling protein	80.43

>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.96  E-value=1e-30  Score=190.55  Aligned_cols=62  Identities=44%  Similarity=0.947  Sum_probs=59.0

Q ss_pred             CCCCCCCccccccccccc-ceeeecCCccccCCCCCCCCCCcccchHHHHHHHHHhCCccccc
Q 030726          106 PKEGPSRCSSCKKRVGLT-GFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAE  167 (172)
Q Consensus       106 ~~~~~~rC~~C~kkvgl~-gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l~k~Np~v~~~  167 (172)
                      +++.++||+.|+|||||+ +|+||||++||+.|||+|+|+|+||||++||++|+|+||+|+++
T Consensus        21 ~k~~~~rC~~C~kkvgl~~~f~CrCg~~FC~~HRy~e~H~C~fDyK~~gr~~iak~NPvV~a~   83 (85)
T 1wff_A           21 KKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSGPS   83 (85)
T ss_dssp             CCCCCCBCSSSCCBCSSSSCEECTTCCEECTTTCSTGGGTCCSCCSSSCCCCCCCCCCCCCTT
T ss_pred             CcccCccchhhCCeecccCCeEcCCCCEecccCCCccCCCCcchhhHHHHHHHHHHCCeecCC
Confidence            456689999999999996 99999999999999999999999999999999999999999986

>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=99.93  E-value=1.3e-27  Score=166.00  Aligned_cols=54  Identities=50%  Similarity=1.179  Sum_probs=50.6

Q ss_pred             CCCCCCCCcccccccccccceeeecCCccccCCCCCCCCCCcccchHHHHHHHH
Q 030726          105 KPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAII  158 (172)
Q Consensus       105 ~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l~  158 (172)
                      +++..++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|+
T Consensus        10 ~~k~~~~rC~~C~kkvgl~~f~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~   63 (64)
T 1wfh_A           10 SPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPSS   63 (64)
T ss_dssp             CCCSSCCCCTTTCCCCCTTCEECSSSCEECTTTCSTTTTTCCCCCSCCCCSCCC
T ss_pred             CCCCcCCcChhhCCccCccCEEeecCCEeccccCCcccCCCCchhhHHHHHHhc
Confidence            446678999999999999999999999999999999999999999999999875

>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=99.92  E-value=5.3e-27  Score=162.99  Aligned_cols=53  Identities=45%  Similarity=1.122  Sum_probs=49.4

Q ss_pred             CCCCCCCCcccccccccccceeeecCCccccCCCCCCCCCCcccchHHHHHHH
Q 030726          105 KPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAI  157 (172)
Q Consensus       105 ~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l  157 (172)
                      +++..++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|
T Consensus        10 ~~~~~~~rC~~C~kkvgl~~f~CrCg~~FC~~HR~~e~H~C~fDyk~~gr~~~   62 (64)
T 1wg2_A           10 RPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGSGPS   62 (64)
T ss_dssp             CCSCCSCSCTTTCCCCTTSCEECTTSCEECSSSCSSTTTTCCCCCSCSCCCSC
T ss_pred             CCCCcCCcChhhCCcccccCeEeecCCEecccCCCccccCCCcchhHHhHHHh
Confidence            34456899999999999999999999999999999999999999999999876

>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.92  E-value=5.7e-26  Score=161.70  Aligned_cols=52  Identities=62%  Similarity=1.308  Sum_probs=48.1

Q ss_pred             CCCCCCCCcccccccccccceeeecCCccccCCCCCCCCCCcccchHHHHHH
Q 030726          105 KPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDA  156 (172)
Q Consensus       105 ~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~  156 (172)
                      ..+..+|||+.|+|||||++|.||||++||+.|||+|.|+|+||||++||++
T Consensus        20 ~~k~~~nRC~~CrKkvgL~gf~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~   71 (74)
T 1wfl_A           20 LPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEASGP   71 (74)
T ss_dssp             CCCSCTTBCSSSCCBCGGGCEECTTSCEECSSSCSTTTTTCCCCGGGTSSCC
T ss_pred             cCCCcCCcChhhCCcccccCeecCCCCEechhcCCCccCCCcchhhhhchhh
Confidence            3455689999999999999999999999999999999999999999999864

>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=99.91  E-value=5.6e-26  Score=161.72  Aligned_cols=54  Identities=48%  Similarity=1.136  Sum_probs=50.1

Q ss_pred             CCCCCCCCCcccccccccccceeeecCCccccCCCCCCCCCCcccchHHHHHHH
Q 030726          104 AKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAI  157 (172)
Q Consensus       104 ~~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l  157 (172)
                      .++++.++||+.|+|||||++|+||||++||+.|||+|+|+|+||||++||++|
T Consensus        19 ~~~k~~~~RC~~C~kkvgL~~f~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~~   72 (74)
T 1wfp_A           19 DPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVASGPS   72 (74)
T ss_dssp             CCTTCCCCBCSSSCCBCTTTCEECTTSCEECTTTCSTTTSCCCSCTTSCCCCCC
T ss_pred             ccCcccCccchhhcCcccccceEeccCCEeccccCCCcCCCCcCchhHHhHHhh
Confidence            344667899999999999999999999999999999999999999999999876

>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.90  E-value=5e-26  Score=159.39  Aligned_cols=54  Identities=28%  Similarity=0.741  Sum_probs=49.3

Q ss_pred             CCCCCCCCCcccccccccccc---eeeecCCccccCCCCCCCCCCcccchHHHHHHH
Q 030726          104 AKPKEGPSRCSSCKKRVGLTG---FKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAI  157 (172)
Q Consensus       104 ~~~~~~~~rC~~C~kkvgl~g---f~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l  157 (172)
                      .++++.++||+.|+|||||++   |+||||++||+.|||+|+|+|+||||++||+.|
T Consensus         9 ~~~~~~~~rC~~C~kk~gL~~~egf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~~   65 (67)
T 1x4w_A            9 RSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGSGPS   65 (67)
T ss_dssp             CCSCSCTTBCSSSCCBCCHHHHHHHCCSSSCCCCTTTCSTGGGTCSSCSSCSSCCCC
T ss_pred             ccCCccCCcchhhCCeecccccCceEecCCCEehhccCCccccCCcccccccccccc
Confidence            345667899999999999995   999999999999999999999999999999764

>2kzy_A ZNF216-A20, zfand5 protein (zinc finger protein 216 (predicte isoform CRA_A); A20 domain, atrogene, metal binding Pro; NMR {Rattus norvegicus} PDB: 2l00_A

Probab=99.77  E-value=3e-19  Score=123.17  Aligned_cols=44  Identities=39%  Similarity=0.936  Sum_probs=36.4

Q ss_pred             CCCCccCCCCCCCCccccccCCCCCCccccCCcchhhhHHHHHHHhhh
Q 030726            1 MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQA   48 (172)
Q Consensus         1 M~~~~~~~q~~~e~p~lC~n~CGFfGs~at~n~CSkCyr~~~~~~~~~   48 (172)
                      |+++..   + |++|+||+|||||||||+|+||||||||+++.+++++
T Consensus         3 M~~e~~---~-~~~~~lC~ngCGFfGnpaT~nlCSkCyr~~~~~~~~~   46 (62)
T 2kzy_A            3 MAQETN---Q-TPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS   46 (62)
T ss_dssp             CCCCCC---C-CSCCCBCTTCCSSBCCTTTTSCCHHHHHHHHHHHHHH
T ss_pred             hhhccc---C-CCcccchhhCCCCcCChhhcCcCHHHHHHHHHhhhcc
Confidence            665432   3 6789999999999999999999999999998766543

>2c7n_A Rabex-5, GEF 1, RAB guanine nucleotide exchange factor 1; protein-binding, ubiquitin binding domain, endocytosis, NUCL protein, polyprotein; 2.1A {Homo sapiens} SCOP: g.39.1.15 PDB: 2c7m_A 2fif_B 2fid_B

Probab=99.71  E-value=2.8e-18  Score=121.71  Aligned_cols=41  Identities=29%  Similarity=0.795  Sum_probs=26.8

Q ss_pred             CccCCCCCCCCccccccCCCCCCccccCCcchhhhHHHHHHH
Q 030726            4 DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQ   45 (172)
Q Consensus         4 ~~~~~q~~~e~p~lC~n~CGFfGs~at~n~CSkCyr~~~~~~   45 (172)
                      +.++++. |++|+||+|||||||||+|+||||||||+.+.+.
T Consensus         6 ~~~~~q~-pe~~~lC~ngCGFfGnpaT~nlCSkCyrd~~~k~   46 (74)
T 2c7n_A            6 ERRGIHV-DQSDLLCKKGCGYYGNPAWQGFCSKCWREEYHKA   46 (74)
T ss_dssp             -------------CCTTCSSSCCCGGGTTCCHHHHHHHHHHH
T ss_pred             hhccCCC-CCcchhHHhCCCCCCChhhcCccHHHHHHHHHHH
Confidence            3455677 8899999999999999999999999999986543

>3oj3_I Tumor necrosis factor alpha-induced protein 3; ubiquitin, zinc finger, zinc ION, protein binding-hydrolase; 2.50A {Homo sapiens} PDB: 3oj4_C

Probab=99.57  E-value=7.4e-16  Score=101.36  Aligned_cols=29  Identities=21%  Similarity=0.644  Sum_probs=27.0

Q ss_pred             ccccc-cCCCCCCccccCCcchhhhHHHHH
Q 030726           15 PILCI-NNCGFFGSVATMNMCSKCYKDIML   43 (172)
Q Consensus        15 p~lC~-n~CGFfGs~at~n~CSkCyr~~~~   43 (172)
                      ..||+ |||||||||+|+|||||||||++.
T Consensus        18 q~lC~~ngCGFfG~p~t~n~CSkCyre~~e   47 (49)
T 3oj3_I           18 TSKCRKAGCVYFGTPENKGFCTLCFIEYRE   47 (49)
T ss_dssp             CCBCSSTTCSSBCBGGGTTBCHHHHHHHHH
T ss_pred             ccccccCCCCCccCcccCCcchHHHHHHHH
Confidence            37999 999999999999999999999864

>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.35  E-value=1.1e-13  Score=100.82  Aligned_cols=59  Identities=20%  Similarity=0.446  Sum_probs=50.0

Q ss_pred             CCCCCCCccc--ccccccccceeee-cCCccccCCCCCCCCCCcccchHHHHHHHHHhCCcccccccccC
Q 030726          106 PKEGPSRCSS--CKKRVGLTGFKCR-CGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI  172 (172)
Q Consensus       106 ~~~~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~~~r~~l~k~Np~v~~~Kl~kI  172 (172)
                      .+..++||..  |+++ +|++|.|+ ||.+||..|||++.|+|+..       .+.+.++...+.++.+|
T Consensus        21 ~~~~~~~C~~~~Ck~~-~~l~f~C~~C~~~FC~~HR~~e~H~C~~~-------~~~k~~~~~~~~l~~~~   82 (86)
T 1wfe_A           21 DEHKSYSCSFKGCTDV-ELVAVICPYCEKNFCLRHRHQSDHDCEKL-------EVAKPRMAATQKLVRSG   82 (86)
T ss_dssp             SCSCCEECCSTTCCCE-ESSCEECTTTCCEECGGGCSTGGGTCSSS-------SCCCSSCCCCCCCSSCS
T ss_pred             cCCCCCCCCCcCCCCC-CccceECCCCCcccccccCCccCCCCCCC-------cccccchHHHHHHHHHH
Confidence            3456799999  9998 88999999 99999999999999999984       34677888877777765

>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.31  E-value=4.3e-13  Score=92.70  Aligned_cols=41  Identities=27%  Similarity=0.761  Sum_probs=37.4

Q ss_pred             CCCCCCCccc--ccccccccceeee-cCCccccCCCCCCCCCCcc
Q 030726          106 PKEGPSRCSS--CKKRVGLTGFKCR-CGNLYCVSHRYSDKHNCPF  147 (172)
Q Consensus       106 ~~~~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~f  147 (172)
                      .+...+||..  |+++ +|++|.|+ |+.+||..|||+|.|+|+-
T Consensus         8 ~k~~~~~Cs~~~Ck~~-~ll~f~C~~C~~~FC~~HR~~e~H~C~~   51 (63)
T 1x4v_A            8 RKIFTNKCERAGCRQR-EMMKLTCERCSRNFCIKHRHPLDHDCSG   51 (63)
T ss_dssp             CCTTCCCCCSTTCCCC-CSSCCBCSSSCCBCCHHHHSTTSSCCCS
T ss_pred             CcccCCCCCccCCCCC-CccceECCCCCcccCcccCCccCCcCCC
Confidence            4556899999  9998 99999999 9999999999999999973

>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=99.24  E-value=1.9e-12  Score=92.21  Aligned_cols=41  Identities=29%  Similarity=0.788  Sum_probs=38.4

Q ss_pred             CCCCccc--ccccccccceeee-cCCccccCCCCCCCCCCcccch
Q 030726          109 GPSRCSS--CKKRVGLTGFKCR-CGNLYCVSHRYSDKHNCPFDYR  150 (172)
Q Consensus       109 ~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  150 (172)
                      ..+||..  |+++ +|++|+|+ |+.+||..|||++.|+|+++++
T Consensus        13 ~g~~Cs~~~C~~~-dflpf~C~~C~~~FC~~HR~~e~H~C~~~~~   56 (75)
T 1wys_A           13 IGQHCQVQHCRQR-DFLPFVCDGCSGIFCLEHRSKDSHGCSEVNV   56 (75)
T ss_dssp             CCCCCSCTTTCCC-SCCCEECTTTCCEECSTTCSSGGGTCCCCSS
T ss_pred             cCCCcCcccCCCc-cceeeECcccCcCcCcccCCccccCCCCCcc
Confidence            4689998  9987 89999999 9999999999999999999986

>2eqe_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}

Probab=97.90  E-value=7e-06  Score=53.35  Aligned_cols=30  Identities=23%  Similarity=0.681  Sum_probs=26.8

Q ss_pred             Cccccc-cCCCCCCccccCCcchhhhHHHHH
Q 030726           14 GPILCI-NNCGFFGSVATMNMCSKCYKDIML   43 (172)
Q Consensus        14 ~p~lC~-n~CGFfGs~at~n~CSkCyr~~~~   43 (172)
                      +...|. .||-|||+|.+.++|..||.++..
T Consensus        14 gt~kCRk~GC~fFGTpen~GFCTlCf~eyre   44 (48)
T 2eqe_A           14 GTSKCRKAGCVYFGTPENKGFCTLCFIEYSG   44 (48)
T ss_dssp             CSSBCSSTTCCSBCCTTTTTCCHHHHHHHHS
T ss_pred             ccchhhhcCCCcccCcccCceeeeehhhhhc
Confidence            446897 999999999999999999999853

>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1

Probab=94.17  E-value=0.023  Score=38.85  Aligned_cols=27  Identities=37%  Similarity=1.062  Sum_probs=24.0

Q ss_pred             CCccccccccccc--ceeee-cCCccccCC
Q 030726          111 SRCSSCKKRVGLT--GFKCR-CGNLYCVSH  137 (172)
Q Consensus       111 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  137 (172)
                      ..|..|+++.+++  -..|| ||.+||+.+
T Consensus        12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~C   41 (73)
T 1vfy_A           12 DACMICSKKFSLLNRKHHCRSCGGVFCQEH   41 (73)
T ss_dssp             SBCTTTCCBCBTTBCCEECTTTCCEECGGG
T ss_pred             CcccCCCCccCCccccccCCCCCEEEcccc
Confidence            4799999999997  49999 999999875

>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1

Probab=94.04  E-value=0.034  Score=39.60  Aligned_cols=28  Identities=32%  Similarity=0.917  Sum_probs=24.5

Q ss_pred             CCCcccccccccccc--eeee-cCCccccCC
Q 030726          110 PSRCSSCKKRVGLTG--FKCR-CGNLYCVSH  137 (172)
Q Consensus       110 ~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H  137 (172)
                      ...|..|+++.+++.  ..|| ||.+||+.+
T Consensus         9 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C   39 (88)
T 1wfk_A            9 ESRCYGCAVKFTLFKKEYGCKNCGRAFCNGC   39 (88)
T ss_dssp             CSBCTTTCCBCCSSSCEEECSSSCCEEETTT
T ss_pred             CCCCcCcCCcccCccccccCCCCCCEEChhH
Confidence            458999999999974  8999 999999874

>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A

Probab=93.83  E-value=0.03  Score=39.13  Aligned_cols=28  Identities=29%  Similarity=1.038  Sum_probs=24.1

Q ss_pred             CCCccccccccccc--ceeee-cCCccccCC
Q 030726          110 PSRCSSCKKRVGLT--GFKCR-CGNLYCVSH  137 (172)
Q Consensus       110 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  137 (172)
                      ...|..|+++.+++  -..|| ||.+||+.+
T Consensus        19 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C   49 (82)
T 2yw8_A           19 ATHCRQCEKEFSISRRKHHCRNCGHIFCNTC   49 (82)
T ss_dssp             CCBCTTTCCBCBTTBCCEECTTTCCEECSGG
T ss_pred             CCcccCcCCcccCccccccCCCCCCEEChHH
Confidence            45799999999987  48999 999999864

>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.61  E-value=0.044  Score=38.35  Aligned_cols=28  Identities=25%  Similarity=0.755  Sum_probs=24.4

Q ss_pred             CCCccccccccccc--ceeee-cCCccccCC
Q 030726          110 PSRCSSCKKRVGLT--GFKCR-CGNLYCVSH  137 (172)
Q Consensus       110 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  137 (172)
                      ...|..|.++.+|+  --.|| ||.+||+..
T Consensus        14 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C   44 (84)
T 1x4u_A           14 FGNCTGCSATFSVLKKRRSCSNCGNSFCSRC   44 (84)
T ss_dssp             CSSCSSSCCCCCSSSCCEECSSSCCEECTTT
T ss_pred             CCcCcCcCCccccchhhhhhcCCCcEEChhh
Confidence            46899999999987  48999 999999865

>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}

Probab=93.38  E-value=0.041  Score=38.60  Aligned_cols=29  Identities=28%  Similarity=0.694  Sum_probs=24.7

Q ss_pred             CCCCccccccccccc--ceeee-cCCccccCC
Q 030726          109 GPSRCSSCKKRVGLT--GFKCR-CGNLYCVSH  137 (172)
Q Consensus       109 ~~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  137 (172)
                      ....|..|+++.+++  -..|| ||.+||+.+
T Consensus        20 ~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C   51 (84)
T 1z2q_A           20 DAPACNGCGCVFTTTVRRHHCRNCGYVLCGDC   51 (84)
T ss_dssp             TCCBCTTTCCBCCTTSCCEECTTTCCEECTGG
T ss_pred             CCCCCcCcCCccccchhcccccCCCcEEChHH
Confidence            346899999999997  48999 999999863

>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A

Probab=93.17  E-value=0.031  Score=42.18  Aligned_cols=28  Identities=36%  Similarity=0.991  Sum_probs=24.1

Q ss_pred             CCCccccccccccc--ceeee-cCCccccCC
Q 030726          110 PSRCSSCKKRVGLT--GFKCR-CGNLYCVSH  137 (172)
Q Consensus       110 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  137 (172)
                      ...|..|+++.+++  -..|| ||.+||+.+
T Consensus        69 ~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~C   99 (125)
T 1joc_A           69 VQNCMACGKGFSVTVRRHHCRQCGNIFCAEC   99 (125)
T ss_dssp             CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred             CCCCcCcCCccccccccccCCCCCeEEChHH
Confidence            45899999999986  48999 999999864

>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1

Probab=92.35  E-value=0.052  Score=43.85  Aligned_cols=28  Identities=29%  Similarity=0.858  Sum_probs=24.4

Q ss_pred             CCCccccccccccc--ceeee-cCCccccCC
Q 030726          110 PSRCSSCKKRVGLT--GFKCR-CGNLYCVSH  137 (172)
Q Consensus       110 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  137 (172)
                      ...|..|+++.+++  -..|| ||.+||+.+
T Consensus       161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~C  191 (220)
T 1dvp_A          161 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQC  191 (220)
T ss_dssp             CSBCTTTCCBCCSSSCCEECTTTCCEECSTT
T ss_pred             CCccCCCCCccCCcccccccCCcCCEEChHH
Confidence            36899999999987  49999 999999864

>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*

Probab=91.10  E-value=0.12  Score=42.18  Aligned_cols=28  Identities=29%  Similarity=0.990  Sum_probs=24.4

Q ss_pred             CCCccccccccccc--ceeee-cCCccccCC
Q 030726          110 PSRCSSCKKRVGLT--GFKCR-CGNLYCVSH  137 (172)
Q Consensus       110 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  137 (172)
                      ...|..|+++.+++  -..|| ||.+||+.+
T Consensus       164 ~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~C  194 (226)
T 3zyq_A          164 AEECHRCRVQFGVMTRKHHCRACGQIFCGKC  194 (226)
T ss_dssp             CSBCTTTCCBCBTTBCCEECTTTCCEECTTT
T ss_pred             CCCCcCcCCCCCccccccccCCCcCEeChhh
Confidence            45899999999987  59999 999999864

>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}

Probab=91.05  E-value=0.084  Score=37.52  Aligned_cols=28  Identities=29%  Similarity=0.915  Sum_probs=24.1

Q ss_pred             CCCccccccccccc--ceeee-cCCccccCC
Q 030726          110 PSRCSSCKKRVGLT--GFKCR-CGNLYCVSH  137 (172)
Q Consensus       110 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  137 (172)
                      ...|..|+++.+|+  -..|| ||.+||+..
T Consensus        20 ~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~C   50 (90)
T 3t7l_A           20 APNCMNCQVKFTFTKRRHHCRACGKVFCGVC   50 (90)
T ss_dssp             CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred             CCcCcCCCCcccchhhCccccCCCCEECCcc
Confidence            45799999999987  59999 999999763

>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1

Probab=89.51  E-value=0.13  Score=38.89  Aligned_cols=41  Identities=22%  Similarity=0.505  Sum_probs=28.7

Q ss_pred             CCCccccccccccc--ceeee-cCCccccC---CCCCCCCCCcccch
Q 030726          110 PSRCSSCKKRVGLT--GFKCR-CGNLYCVS---HRYSDKHNCPFDYR  150 (172)
Q Consensus       110 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~---HRy~e~H~C~fDyk  150 (172)
                      ...|..|+++.+++  --.|| ||.+||+.   |+.+..--|..=|.
T Consensus        19 ~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~~   65 (120)
T 1y02_A           19 EPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQR   65 (120)
T ss_dssp             -CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHH
T ss_pred             cCcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCceECHHHHH
Confidence            36899999999886  48999 99999875   46665566665554

>2eqf_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}

Probab=84.17  E-value=0.52  Score=30.01  Aligned_cols=25  Identities=20%  Similarity=0.568  Sum_probs=22.0

Q ss_pred             ccccCCCCCCccccCCcchhhhHHH
Q 030726           17 LCINNCGFFGSVATMNMCSKCYKDI   41 (172)
Q Consensus        17 lC~n~CGFfGs~at~n~CSkCyr~~   41 (172)
                      -++.+|..|||...+++|.-||.-.
T Consensus        12 C~apgCdhygN~kc~GyCNeC~~fK   36 (46)
T 2eqf_A           12 CRAPACDHFGNAKCNGYCNECFQFK   36 (46)
T ss_dssp             CSSTTCCSCCBGGGTBSCHHHHHHH
T ss_pred             ccCcccccccchhhhhhhHHHHhhH
Confidence            4588999999999999999999643

>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A

Probab=83.69  E-value=0.47  Score=40.71  Aligned_cols=42  Identities=19%  Similarity=0.403  Sum_probs=27.7

Q ss_pred             CCCCCcccccccc-ccc--ceeee-cCCccccCCCCCCCCCCcccch
Q 030726          108 EGPSRCSSCKKRV-GLT--GFKCR-CGNLYCVSHRYSDKHNCPFDYR  150 (172)
Q Consensus       108 ~~~~rC~~C~kkv-gl~--gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  150 (172)
                      ..+..|..|++.+ |+.  |++|| ||.++|..-.-.=. .|.-+.-
T Consensus       355 ~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~-~C~~~~~  400 (406)
T 2vrw_B          355 EETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVP-PCGRHGQ  400 (406)
T ss_dssp             SSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSC-CC-----
T ss_pred             CCCCCCccccchhceeCCCCCCCCCCcCccchhhhhhCC-CCCCCch
Confidence            4578999999988 674  89999 99999976422111 3876644

>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}

Probab=81.56  E-value=0.29  Score=42.15  Aligned_cols=28  Identities=29%  Similarity=0.735  Sum_probs=0.0

Q ss_pred             CCCccccccccccc--ceeee-cCCccccCC
Q 030726          110 PSRCSSCKKRVGLT--GFKCR-CGNLYCVSH  137 (172)
Q Consensus       110 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  137 (172)
                      ...|..|+++.+++  ...|| ||.+||+.+
T Consensus       375 ~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~C  405 (434)
T 3mpx_A          375 VMMCMNCGCDFSLTLRRHHCHACGKIVCRNC  405 (434)
T ss_dssp             -------------------------------
T ss_pred             CCcCCCcCCCCCCcchhhhcccCcCEeehhh
Confidence            46899999999986  59999 999998653

>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}

Probab=80.43  E-value=0.56  Score=31.17  Aligned_cols=24  Identities=38%  Similarity=0.976  Sum_probs=19.4

Q ss_pred             CCCCcccccccccc--cceeee-cCCc
Q 030726          109 GPSRCSSCKKRVGL--TGFKCR-CGNL  132 (172)
Q Consensus       109 ~~~rC~~C~kkvgl--~gf~Cr-Cg~~  132 (172)
                      .+..|..|++++++  .+++|| |+.+
T Consensus        18 ~~~~C~~Cg~~i~~gkq~~kC~dC~~~   44 (61)
T 4b6d_A           18 KPESCVPCGKRIKFGKLSLKCRDCRVV   44 (61)
T ss_dssp             SCEECTTTCCEECTTCEEEEESSSSCE
T ss_pred             CCcccccccCEEEEeeEeeECCCCCCe
Confidence            45789999999987  589999 8643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	172
d1wffa_	85	g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog	6e-27
d1wfha_	64	g.80.1.1 (A:) Zinc finger A20 and AN1 domains cont	2e-24
d1wfla_	74	g.80.1.1 (A:) Zinc finger A20 domain containing pr	4e-22
d1wfpa_	74	g.80.1.1 (A:) Zinc finger A20 and AN1 domains cont	3e-21
d2c7na1	56	g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-b	2e-12

>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]} Length = 85

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: ANUBL1 (AN1, ubiquitin-like, homolog)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 94.9 bits (236), Expect = 6e-27
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)

Query: 100 ESVEAKPKEGPSRCSSCKKRVGL-TGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAII 158
           ++     K+    C  C K+ GL T F+CRCGN +C SHRY++ H C +DY++A R  + 
Sbjct: 15  KAPLQTKKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLE 74

Query: 159 KANPVIKA 166
           +ANPV   
Sbjct: 75  EANPVSGP 82

>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 64

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At2g36320
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 87.9 bits (218), Expect = 2e-24
 Identities = 28/59 (47%), Positives = 38/59 (64%)

Query: 99  SESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAI 157
             S +  P + P+RC+ C+KRVGLTGF CRCG  +C SHRY + H C FD+++A     
Sbjct: 4   GSSGQPSPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPS 62

>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 74

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 domain containing protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 82.7 bits (204), Expect = 4e-22
 Identities = 34/60 (56%), Positives = 42/60 (70%)

Query: 95  ASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAAR 154
           +S+  E     PK   +RC  C+K+VGLTGF CRCGNL+C  HRYSDKHNCP+DY+  A 
Sbjct: 10  SSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAS 69

>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 74

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At1g12440
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 80.3 bits (198), Expect = 3e-21
 Identities = 26/60 (43%), Positives = 38/60 (63%)

Query: 95  ASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAAR 154
             + + +    PK   +RC SC K+VG+TGFKCRCG+ +C +HRY + H C FD++  A 
Sbjct: 10  GGDSAAAPLDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAS 69

>d2c7na1 g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-binding domain {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: A20-like zinc finger
domain: RabGEF1 (Rabex-5), ubiquitin-binding domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.9 bits (137), Expect = 2e-12
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 17 LCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLA 51
          LC   CG++G+ A    CSKC+++   K  Q ++ 
Sbjct: 1  LCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQ 35

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	172
d1wffa_	85	ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus	99.94
d1wfha_	64	Zinc finger A20 and AN1 domains containing protein	99.92
d1wfla_	74	Zinc finger A20 domain containing protein 2 {Mouse	99.91
d1wfpa_	74	Zinc finger A20 and AN1 domains containing protein	99.9
d2c7na1	56	RabGEF1 (Rabex-5), ubiquitin-binding domain {Human	99.67
d1wfea_	86	AN1-type zinc finger protein 1 {Mouse (Mus musculu	98.2
d1wfka_	88	Zinc finger FYVE domain containing protein 19 {Mou	95.37
d1dvpa2	72	Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7	94.17
d1vfya_	67	vps27p protein {Baker's yeast (Saccharomyces cerev	93.87
d1joca1	64	Eea1 {Human (Homo sapiens) [TaxId: 9606]}	92.9
d1zbdb_	124	Effector domain of rabphilin-3a {Rat (Rattus norve	92.34
d1y02a2	51	Rififylin (FYVE-RING finger protein Sakura) {Human	90.72
d1tbna_	66	Protein kinase c-gamma {Rat (Rattus rattus) [TaxId	82.04

>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: ANUBL1 (AN1, ubiquitin-like, homolog)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=4.3e-29  Score=180.29  Aligned_cols=64  Identities=44%  Similarity=0.926  Sum_probs=58.9

Q ss_pred             CCCCCCCCCcccccccccc-cceeeecCCccccCCCCCCCCCCcccchHHHHHHHHHhCCccccc
Q 030726          104 AKPKEGPSRCSSCKKRVGL-TGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAE  167 (172)
Q Consensus       104 ~~~~~~~~rC~~C~kkvgl-~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l~k~Np~v~~~  167 (172)
                      ...+..++||+.|+|||+| ++|+||||++||+.|||||.|+|+||||+.||++|+++||+|++.
T Consensus        19 ~~kk~~~~RC~~C~KKl~l~~~~~CrCg~~FC~~HR~pe~H~CtfDyK~~~k~~L~k~NP~i~p~   83 (85)
T d1wffa_          19 QTKKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSGPS   83 (85)
T ss_dssp             CCCCCCCCBCSSSCCBCSSSSCEECTTCCEECTTTCSTGGGTCCSCCSSSCCCCCCCCCCCCCTT
T ss_pred             ccccccCCcChhcCCeecCCcCeecCCCCEehhhcCCCcCcCCCcchHHHHHHHHHHHCCccCCC
Confidence            3445567899999999999 489999999999999999999999999999999999999999874

>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At2g36320
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.92  E-value=9.5e-27  Score=160.00  Aligned_cols=52  Identities=52%  Similarity=1.247  Sum_probs=48.5

Q ss_pred             CCCCCCCCcccccccccccceeeecCCccccCCCCCCCCCCcccchHHHHHH
Q 030726          105 KPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDA  156 (172)
Q Consensus       105 ~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~  156 (172)
                      .++++++||..|+|||+|++|+||||++||+.|||||.|+|+||||++||..
T Consensus        10 ~~~~k~~RC~~C~KKl~l~~~~CrCg~~FC~~HR~pe~H~CtfDyK~~Gr~~   61 (64)
T d1wfha_          10 SPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGP   61 (64)
T ss_dssp             CCCSSCCCCTTTCCCCCTTCEECSSSCEECTTTCSTTTTTCCCCCSCCCCSC
T ss_pred             CCCCCCCcChhhCCCccceeeeccCCCEehhhcCCCcCcCCCCcchhccCCC
Confidence            4457789999999999999999999999999999999999999999999854

>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 domain containing protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=1.2e-25  Score=158.46  Aligned_cols=51  Identities=63%  Similarity=1.331  Sum_probs=46.4

Q ss_pred             CCCCCCCCCcccccccccccceeeecCCccccCCCCCCCCCCcccchHHHH
Q 030726          104 AKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAAR  154 (172)
Q Consensus       104 ~~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r  154 (172)
                      .+++..++||..|+|||||++|+||||++||+.|||||.|+|+||||+.|.
T Consensus        19 ~~~k~k~~RC~~C~KKl~l~~~~CrCg~~FC~~HR~pe~H~CtfDyK~~g~   69 (74)
T d1wfla_          19 ELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAS   69 (74)
T ss_dssp             CCCCSCTTBCSSSCCBCGGGCEECTTSCEECSSSCSTTTTTCCCCGGGTSS
T ss_pred             cCCCCCCCcChhhCCcccceeeEccCCCEehhhcCCCcCcCCCCccccccc
Confidence            344567899999999999999999999999999999999999999998763

>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At1g12440
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.90  E-value=3.6e-25  Score=155.98  Aligned_cols=51  Identities=51%  Similarity=1.212  Sum_probs=47.9

Q ss_pred             CCCCCCCCCcccccccccccceeeecCCccccCCCCCCCCCCcccchHHHH
Q 030726          104 AKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAAR  154 (172)
Q Consensus       104 ~~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r  154 (172)
                      .+++..++||+.|+|||+|++|.||||++||+.|||||.|+|+||||+.||
T Consensus        19 ~~~k~kk~RC~~C~KKl~l~~~~CrCg~~FC~~HR~pe~H~C~fDyK~~gr   69 (74)
T d1wfpa_          19 DPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAS   69 (74)
T ss_dssp             CCTTCCCCBCSSSCCBCTTTCEECTTSCEECTTTCSTTTSCCCSCTTSCCC
T ss_pred             CCCCCCCCcChhcCCccCCCceecCCCChhhhccCCccCcCCCCcchhccc
Confidence            455677999999999999999999999999999999999999999999887

>d2c7na1 g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-binding domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: A20-like zinc finger
domain: RabGEF1 (Rabex-5), ubiquitin-binding domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.1e-17  Score=111.49  Aligned_cols=33  Identities=36%  Similarity=0.889  Sum_probs=29.7

Q ss_pred             ccccCCCCCCccccCCcchhhhHHHHHHHhhhh
Q 030726           17 LCINNCGFFGSVATMNMCSKCYKDIMLKQDQAK   49 (172)
Q Consensus        17 lC~n~CGFfGs~at~n~CSkCyr~~~~~~~~~~   49 (172)
                      ||+|||||||||+|+|||||||||+..++++..
T Consensus         1 lC~~gCGFyG~~~~~g~CSkCyr~~~~k~~q~~   33 (56)
T d2c7na1           1 LCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQ   33 (56)
T ss_dssp             CCTTCSSSCCCGGGTTCCHHHHHHHHHHHHHHH
T ss_pred             CCccCCCCCCCcccCCcchHHHHHHHHHHHHHH
Confidence            799999999999999999999999987766543

>d1wfea_ g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: AN1-type zinc finger protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.20  E-value=1.9e-07  Score=66.05  Aligned_cols=40  Identities=30%  Similarity=0.748  Sum_probs=34.3

Q ss_pred             CCCCCCccc--ccccccccceeee-cCCccccCCCCCCCCCCcc
Q 030726          107 KEGPSRCSS--CKKRVGLTGFKCR-CGNLYCVSHRYSDKHNCPF  147 (172)
Q Consensus       107 ~~~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~f  147 (172)
                      ..+..+|..  |++ +.++.|.|. |+..||..||+++.|.|.-
T Consensus        22 ~~~~~~Cs~~~C~~-~~~lp~~C~~C~~~FC~~Hr~~e~H~C~~   64 (86)
T d1wfea_          22 EHKSYSCSFKGCTD-VELVAVICPYCEKNFCLRHRHQSDHDCEK   64 (86)
T ss_dssp             CSCCEECCSTTCCC-EESSCEECTTTCCEECGGGCSTGGGTCSS
T ss_pred             CCccCcCCCCCCCC-cccCcccchhhCcchhhccCCccCCCCCC
Confidence            345678986  985 689999995 9999999999999999963

>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Zinc finger FYVE domain containing protein 19
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.37  E-value=0.0045  Score=42.69  Aligned_cols=29  Identities=31%  Similarity=0.849  Sum_probs=25.5

Q ss_pred             CCCCccccccccccc--ceeee-cCCccccCC
Q 030726          109 GPSRCSSCKKRVGLT--GFKCR-CGNLYCVSH  137 (172)
Q Consensus       109 ~~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  137 (172)
                      ..++|..|+++.+|+  -..|| ||.+||..+
T Consensus         8 ~~s~C~~C~~~Fs~~~rrhhCr~CG~vfC~~C   39 (88)
T d1wfka_           8 MESRCYGCAVKFTLFKKEYGCKNCGRAFCNGC   39 (88)
T ss_dssp             CCSBCTTTCCBCCSSSCEEECSSSCCEEETTT
T ss_pred             ccCcCcccCchhccccccccccccChhhChHH
Confidence            457899999999987  58999 999999876

>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Hrs
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.17  E-value=0.016  Score=38.28  Aligned_cols=28  Identities=29%  Similarity=0.874  Sum_probs=24.7

Q ss_pred             CCccccccccccc--ceeee-cCCccccCCC
Q 030726          111 SRCSSCKKRVGLT--GFKCR-CGNLYCVSHR  138 (172)
Q Consensus       111 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR  138 (172)
                      +.|..|+++.+++  -..|| ||.+||+.+-
T Consensus        14 ~~C~~C~~~F~~~~rrhhCr~CG~~~C~~C~   44 (72)
T d1dvpa2          14 RVCHRCRVEFTFTNRKHHCRNCGQVFCGQCT   44 (72)
T ss_dssp             SBCTTTCCBCCSSSCCEECTTTCCEECSTTS
T ss_pred             CccccCCCcccCccccccccccCCeeChhhh
Confidence            4699999999997  58999 9999998874

>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: vps27p protein
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.87  E-value=0.012  Score=38.33  Aligned_cols=27  Identities=37%  Similarity=1.062  Sum_probs=23.7

Q ss_pred             CCccccccccccc--ceeee-cCCccccCC
Q 030726          111 SRCSSCKKRVGLT--GFKCR-CGNLYCVSH  137 (172)
Q Consensus       111 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  137 (172)
                      +.|..|+++.+|+  -..|| ||.+||+.+
T Consensus         6 ~~C~~C~~~F~~~~rkhhCr~CG~~fC~~C   35 (67)
T d1vfya_           6 DACMICSKKFSLLNRKHHCRSCGGVFCQEH   35 (67)
T ss_dssp             SBCTTTCCBCBTTBCCEECTTTCCEECGGG
T ss_pred             cccccCCCcccCcccccccccCCCEecccc
Confidence            3599999999996  48999 999999876

>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Eea1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.90  E-value=0.019  Score=37.00  Aligned_cols=28  Identities=36%  Similarity=0.991  Sum_probs=24.2

Q ss_pred             CCCccccccccccc--ceeee-cCCccccCC
Q 030726          110 PSRCSSCKKRVGLT--GFKCR-CGNLYCVSH  137 (172)
Q Consensus       110 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  137 (172)
                      ...|..|+++.+|+  -..|| ||.+||+..
T Consensus         8 ~~~C~~C~~~F~~~~rrHHCR~CG~v~C~~C   38 (64)
T d1joca1           8 VQNCMACGKGFSVTVRRHHCRQCGNIFCAEC   38 (64)
T ss_dssp             CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred             CCcCcCcCCcccCCccccchhhhCCeecccc
Confidence            35799999999997  58999 999999865

>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Effector domain of rabphilin-3a
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.34  E-value=0.033  Score=39.82  Aligned_cols=30  Identities=27%  Similarity=0.757  Sum_probs=24.9

Q ss_pred             CCCCccccccccccc---ceeee-cCCccccCCC
Q 030726          109 GPSRCSSCKKRVGLT---GFKCR-CGNLYCVSHR  138 (172)
Q Consensus       109 ~~~rC~~C~kkvgl~---gf~Cr-Cg~~FC~~HR  138 (172)
                      ..+.|..|++.++++   +..|| ||.+||+.=+
T Consensus        47 ~~~~C~~C~~~f~~~~~~~~~C~~C~~~~C~~C~   80 (124)
T d1zbdb_          47 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCG   80 (124)
T ss_dssp             SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSE
T ss_pred             CCCcCcccCCcccCCCCCCCcCccCCcccccCCC
Confidence            457899999999964   57898 9999998853

>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Rififylin (FYVE-RING finger protein Sakura)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.72  E-value=0.043  Score=34.04  Aligned_cols=26  Identities=27%  Similarity=0.726  Sum_probs=22.7

Q ss_pred             Cccccccccccc--ceeee-cCCccccCC
Q 030726          112 RCSSCKKRVGLT--GFKCR-CGNLYCVSH  137 (172)
Q Consensus       112 rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  137 (172)
                      -|..|+++.+++  -..|| ||.+||+..
T Consensus         2 ~C~~C~~~F~~~~rkhhCr~CG~~fC~~C   30 (51)
T d1y02a2           2 SCKSCGAHFANTARKQTCLDCKKNFCMTC   30 (51)
T ss_dssp             CCTTTCCCCSSGGGCEECTTTCCEECGGG
T ss_pred             CccccCCcccCCccCcccccCCcccCccc
Confidence            388999999996  48999 999999875

>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase c-gamma
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=82.04  E-value=0.69  Score=29.05  Aligned_cols=42  Identities=26%  Similarity=0.434  Sum_probs=29.3

Q ss_pred             CCCCccccccccc-c--cceeee-cCCccccCCCCCCCCCCcccch
Q 030726          109 GPSRCSSCKKRVG-L--TGFKCR-CGNLYCVSHRYSDKHNCPFDYR  150 (172)
Q Consensus       109 ~~~rC~~C~kkvg-l--~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  150 (172)
                      .+..|..|++.|- +  .||+|+ |+.++=....-.=...|..++.
T Consensus        18 ~~~~C~~C~~~i~g~~~~g~~C~~C~~~~H~~C~~~v~~~C~~~~~   63 (66)
T d1tbna_          18 SPTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRSVPSLCGVDHT   63 (66)
T ss_dssp             SCCBCSSSCCBCCTTSSSCEEETTTCCEECTTTTTTSCCCSSCCCC
T ss_pred             CCcCCcCCCCcccCcccCccccCcccCeEChHHhccccccCCCCcc
Confidence            4568999999884 4  389998 9887755554444456766553