Citrus Sinensis ID: 030929

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
Protein Sequence
MAGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEYVYQHGKFLKGSSIQGLHTSICSPSWMGYKKSCCRRDVCPSHEGTIT
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHHHHHHHHHcccccccEcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHcccccccccHHHHHHHHHHccHHHHHHHHcccccccccccHHccc
Coil and Loop (DISEMBL)
magtdndkplTKISESFKELAATVNSQAADVELAAFSRACsyvsplfgclGIAFKFAEMDYVAKVDDLAEASKSILTLQSVidrdiegncvrkagshtrnLLRVKRGLDMVRVLFEQILAAEYVYQHgkflkgssiqglhtsicspswmgykksccrrdvcpshegtit
Flexible Loop (DISEMBL)
magtdndkpltKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAEASKSILtlqsvidrdiegncvrkagshtrnllrvkrGLDMVRVLFEQILAAEYVYQHGKFLKGSSIQGLHTSICSPSWMGYKKSCCRRDVCPSHEGTIT
Low Complexity Region (SEG)
MAGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEYVYQHGKFLKGSSIQGLHTSICSPSWMGYKKSCCRRDVCPSHEGTIT
Disordered region (IsUnstruct)
**********************TVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEYVYQHGKFLKGSSIQGLHTSICSPSWMGYKKSCCRRDVC********
Disordered Region (DISOPRED)
**********TKISESFKE***********VELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAEASKSILTLQSVIDR**************RNLLRVKRGLDMVRVLFEQILA**********LKGSSIQGLHTSICSPSWMGYKKSCCRRDVCPSHEGTIT
Disordered Region (DISEMBL)
MAGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEYVYQHGKFLKGSSIQGLHTSICSPSWMGYKKSCCRRDV*********
Disordered Region (DISPRO)
******DKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEYVYQHGKFLKGSSIQGLHTSICSPSWMGYKKSCCRRDVCPSHE****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEYVYQHGKFLKGSSIQGLHTSICSPSWMGYKKSCCRRDVCPSHEGTIT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	169	2.2.26 [Sep-21-2011]
D3ZY60	520	Pleckstrin homology domai	yes	no	0.686	0.223	0.248	0.0004

>sp|D3ZY60|PKHA8_RAT Pleckstrin homology domain-containing family A member 8 OS=Rattus norvegicus GN=Plekha8 PE=3 SV=1

 Score = 44.3 bits (103), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 13/129 (10%)

Query: 7   DKPLTKISESFKELAATVNSQAADVEL--------AAFSRACSYVSPLFGCLG-IAFKFA 57
           + P     E      +T+N+  +D+EL         AF  +C  V P+   LG   F   
Sbjct: 299 ESPWEDSEEVIPTFFSTMNTSFSDIELLEDSGIPTEAFLASCYAVVPVLDKLGPTVFAPV 358

Query: 58  EMDYVAKVDDLAEA----SKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRV 113
           +MD V  +  + +      +   TLQ ++  ++E +  R   S T  LL +KRGL  ++ 
Sbjct: 359 KMDLVGNIKKVNQKYITNKEEFTTLQKIVLHEVEADVARVRNSATEALLWLKRGLKFLKG 418

Query: 114 LFEQILAAE 122
              ++   E
Sbjct: 419 FLTEVKNGE 427

Cargo transport protein that is required for apical transport from the trans-Golgi network (TGN). Transports AQP2 from the trans-Golgi network (TGN) to sites of AQP2 phosphorylation. Mediates the non-vesicular transport of glucosylceramide (GlcCer) from the trans-Golgi network (TGN) to the plasma membrane and plays a pivotal role in the synthesis of complex glycosphingolipids. Binding of both phosphatidylinositol 4-phosphate (PIP) and ARF1 are essential for the GlcCer transfer ability. Also required for primary cilium formation, possibly by being involved in the transport of raft lipids to the apical membrane, and for membrane tubulation.
Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	169
312283539	206	unnamed protein product [Thellungiella h	0.721	0.592	0.754	6e-47
224090181	205	predicted protein [Populus trichocarpa]	0.769	0.634	0.703	9e-47
449443730	204	PREDICTED: glycolipid transfer protein d	0.710	0.588	0.741	8e-46
297823255	206	hypothetical protein ARALYDRAFT_482433 [	0.721	0.592	0.745	8e-46
255584612	212	conserved hypothetical protein [Ricinus	0.721	0.575	0.713	4e-45
224096286	205	predicted protein [Populus trichocarpa]	0.769	0.634	0.688	1e-44
225444015	205	PREDICTED: glycolipid transfer protein d	0.721	0.595	0.721	1e-44
15226804	206	glycolipid transfer protein-like protein	0.721	0.592	0.721	1e-43
351724037	206	uncharacterized protein LOC100499750 [Gl	0.721	0.592	0.682	5e-41
414873212	258	TPA: putative glycolipid transfer protei	0.721	0.472	0.691	3e-40

>gi|312283539|dbj|BAJ34635.1| unnamed protein product [Thellungiella halophila]

 Score =  191 bits (486), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 92/122 (75%), Positives = 106/122 (86%)

Query: 1   MAGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMD 60
           MA +D ++PL KIS +FKELAATVNS + +V +A FS ACS VSPLFGCLGIAFKFAEMD
Sbjct: 1   MADSDAERPLRKISTAFKELAATVNSPSPEVPVAQFSHACSLVSPLFGCLGIAFKFAEMD 60

Query: 61  YVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILA 120
           YVAKV+DLA AS S+ TL  ++D+DIE NCVRKAGSHTRNLLRVKRGLDMVRVLFEQI+A
Sbjct: 61  YVAKVNDLARASSSVSTLLVMVDKDIEANCVRKAGSHTRNLLRVKRGLDMVRVLFEQIIA 120

Query: 121 AE 122
           +E
Sbjct: 121 SE 122

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224090181|ref|XP_002308949.1| predicted protein [Populus trichocarpa] gi|222854925|gb|EEE92472.1| predicted protein [Populus trichocarpa]

 Score =  191 bits (485), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 95/135 (70%), Positives = 108/135 (80%), Gaps = 5/135 (3%)

Query: 1   MAGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMD 60
           M   + +KPL KI+E+FKEL AT+ SQ  +VE+A FS ACS VSPLFGCLGIAFKFAEMD
Sbjct: 1   MGDLETEKPLKKIAEAFKELEATIKSQTQEVEVAPFSHACSLVSPLFGCLGIAFKFAEMD 60

Query: 61  YVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILA 120
           YVAKV DLAEASKSI TLQSV+D+D+E N VRK GSH+RNLLRVKRGLDMVRVLFEQI+ 
Sbjct: 61  YVAKVHDLAEASKSIGTLQSVLDKDVERNSVRKGGSHSRNLLRVKRGLDMVRVLFEQIMV 120

Query: 121 AEYVYQHGKFLKGSS 135
            E     G  LKG +
Sbjct: 121 TE-----GNSLKGPA 130

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443730|ref|XP_004139630.1| PREDICTED: glycolipid transfer protein domain-containing protein 1-like [Cucumis sativus] gi|449475397|ref|XP_004154440.1| PREDICTED: glycolipid transfer protein domain-containing protein 1-like [Cucumis sativus]

 Score =  188 bits (477), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 89/120 (74%), Positives = 104/120 (86%)

Query: 3   GTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYV 62
           G   +KPL  ISESFK LAA +NS    VE+A FSRACS++SPLFGCLGIAFKFAEMDYV
Sbjct: 2   GDLGEKPLQNISESFKALAANINSGNTTVEVAPFSRACSFISPLFGCLGIAFKFAEMDYV 61

Query: 63  AKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAE 122
           AKV+DL E+SKSI++LQ+++D+DIE +CVRKAGSH+RNLLRVKRGLDMVRVLFEQIL  E
Sbjct: 62  AKVNDLVESSKSIVSLQALLDKDIESDCVRKAGSHSRNLLRVKRGLDMVRVLFEQILLTE 121

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297823255|ref|XP_002879510.1| hypothetical protein ARALYDRAFT_482433 [Arabidopsis lyrata subsp. lyrata] gi|297325349|gb|EFH55769.1| hypothetical protein ARALYDRAFT_482433 [Arabidopsis lyrata subsp. lyrata]

 Score =  188 bits (477), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 91/122 (74%), Positives = 102/122 (83%)

Query: 1   MAGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMD 60
           MA +D DKPL KIS +FKELA  VNS + +V +A FS ACS VSPLFGCLGIAFKFAEMD
Sbjct: 1   MADSDADKPLRKISTAFKELAVIVNSPSPEVPVAQFSHACSLVSPLFGCLGIAFKFAEMD 60

Query: 61  YVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILA 120
           YVAKVDDL  AS SI TL  ++D+DIE NCVRK GSHTRNLLRVKRGLDMV+VLFEQI+A
Sbjct: 61  YVAKVDDLVRASSSISTLVVMMDKDIEANCVRKPGSHTRNLLRVKRGLDMVKVLFEQIIA 120

Query: 121 AE 122
           +E
Sbjct: 121 SE 122

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255584612|ref|XP_002533030.1| conserved hypothetical protein [Ricinus communis] gi|223527192|gb|EEF29361.1| conserved hypothetical protein [Ricinus communis]

 Score =  186 bits (471), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 92/129 (71%), Positives = 107/129 (82%), Gaps = 7/129 (5%)

Query: 1   MAGTDNDKPLTKISESFKELAATVNSQ-------AADVELAAFSRACSYVSPLFGCLGIA 53
           MA  +  KPL KI+E+FKELA T+NSQ       +AD+E+A FSRACS VSPLFGCLGIA
Sbjct: 1   MADFEIQKPLRKIAEAFKELAVTLNSQTMASSTSSADLEVAPFSRACSLVSPLFGCLGIA 60

Query: 54  FKFAEMDYVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRV 113
           FKFAEMDYV+KV DL EASKSI T+Q ++++DIE NCVRKAGSH+RNLLRVKRGLDMV+V
Sbjct: 61  FKFAEMDYVSKVRDLGEASKSIGTIQEMVNKDIEENCVRKAGSHSRNLLRVKRGLDMVKV 120

Query: 114 LFEQILAAE 122
           LFEQIL  E
Sbjct: 121 LFEQILITE 129

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224096286|ref|XP_002334703.1| predicted protein [Populus trichocarpa] gi|224138046|ref|XP_002322716.1| predicted protein [Populus trichocarpa] gi|222867346|gb|EEF04477.1| predicted protein [Populus trichocarpa] gi|222874212|gb|EEF11343.1| predicted protein [Populus trichocarpa]

 Score =  184 bits (467), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 93/135 (68%), Positives = 109/135 (80%), Gaps = 5/135 (3%)

Query: 1   MAGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMD 60
           M   D  KPL KI+E+FKEL AT+NSQ+ +VE+A FS ACS VSPLFGCLGIAFKFAE+D
Sbjct: 1   MGDLDTAKPLRKIAEAFKELEATINSQSQEVEVAPFSHACSLVSPLFGCLGIAFKFAEVD 60

Query: 61  YVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILA 120
           YVAKV DLAEASKSI TLQS++++DI+GN VRK+GSH+RNLLRVKRGL MV+VLFE IL 
Sbjct: 61  YVAKVLDLAEASKSIGTLQSLLEKDIQGNSVRKSGSHSRNLLRVKRGLVMVKVLFELILV 120

Query: 121 AEYVYQHGKFLKGSS 135
            E     G  LKG +
Sbjct: 121 TE-----GNSLKGPA 130

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444015|ref|XP_002281564.1| PREDICTED: glycolipid transfer protein domain-containing protein 1 isoform 1 [Vitis vinifera] gi|297740811|emb|CBI30993.3| unnamed protein product [Vitis vinifera]

 Score =  184 bits (467), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 88/122 (72%), Positives = 103/122 (84%)

Query: 1   MAGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMD 60
           M   D DK L KI E+FKE+A+ VNSQ  D+E+A FS ACS VSPLFGCLGIAFKFAEMD
Sbjct: 1   MEDGDGDKALRKIGEAFKEIASAVNSQTVDIEVAPFSHACSLVSPLFGCLGIAFKFAEMD 60

Query: 61  YVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILA 120
           YVAKV+DLA+ S SI TL +++D DIEGNCVRKAGS++RNLLRVKRGLDMVRVLFE +LA
Sbjct: 61  YVAKVNDLAKTSSSISTLSALLDHDIEGNCVRKAGSNSRNLLRVKRGLDMVRVLFEHMLA 120

Query: 121 AE 122
           ++
Sbjct: 121 SD 122

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15226804|ref|NP_181016.1| glycolipid transfer protein-like protein [Arabidopsis thaliana] gi|3132476|gb|AAC16265.1| unknown protein [Arabidopsis thaliana] gi|45752746|gb|AAS76271.1| At2g34690 [Arabidopsis thaliana] gi|330253916|gb|AEC09010.1| glycolipid transfer protein-like protein [Arabidopsis thaliana]

 Score =  181 bits (458), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 88/122 (72%), Positives = 101/122 (82%)

Query: 1   MAGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMD 60
           MA ++ DKPL KIS +FK+LA  VNS   +V +  FS ACS VSPLFGCLGIAFKFAEMD
Sbjct: 1   MADSEADKPLRKISAAFKKLAIIVNSPNPEVPVTQFSHACSLVSPLFGCLGIAFKFAEMD 60

Query: 61  YVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILA 120
           YVAKVDDL  AS SI TL  ++D+DIE +CVRKAGSHTRNLLRVKRGLDMV+VLFEQI+A
Sbjct: 61  YVAKVDDLVRASSSISTLVVMMDKDIEADCVRKAGSHTRNLLRVKRGLDMVKVLFEQIIA 120

Query: 121 AE 122
           +E
Sbjct: 121 SE 122

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724037|ref|NP_001235508.1| uncharacterized protein LOC100499750 [Glycine max] gi|255626261|gb|ACU13475.1| unknown [Glycine max]

 Score =  172 bits (435), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 84/123 (68%), Positives = 102/123 (82%), Gaps = 1/123 (0%)

Query: 1   MAGTDNDKPLTKISESFKELAATV-NSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEM 59
           MA  + DK L +I+E+FK+LA  V +SQ+A+V+++ FS ACS VSPLFGCLG+AFKFAEM
Sbjct: 1   MAEGNGDKTLRRIAEAFKDLANVVTDSQSAEVKVSPFSHACSLVSPLFGCLGVAFKFAEM 60

Query: 60  DYVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQIL 119
           DYVAKV+DL EASK +  LQS+I+ D++ N VRK GSHTRNLLRVKRGLDMVRVLFEQIL
Sbjct: 61  DYVAKVNDLVEASKCVQNLQSLIELDVQANTVRKGGSHTRNLLRVKRGLDMVRVLFEQIL 120

Query: 120 AAE 122
             E
Sbjct: 121 VTE 123

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|414873212|tpg|DAA51769.1| TPA: putative glycolipid transfer protein (GLTP) family protein [Zea mays]

 Score =  169 bits (428), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 85/123 (69%), Positives = 98/123 (79%), Gaps = 1/123 (0%)

Query: 1   MAGTDNDKPLTKISESFKELAATVNSQAA-DVELAAFSRACSYVSPLFGCLGIAFKFAEM 59
           M  +  DKPL +I+ SF+ELAA    Q A  ++  AFSRACS VS LFGCLGIAFKFAEM
Sbjct: 53  MGSSQADKPLRRIAVSFEELAAVAKQQPAVPMDAGAFSRACSNVSVLFGCLGIAFKFAEM 112

Query: 60  DYVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQIL 119
           DYVAKVDDL EASKSI TL S+++RDI+ + VRK GSHTRNLLRVKRG+DMV+VLFEQIL
Sbjct: 113 DYVAKVDDLVEASKSISTLPSMVERDIQTDTVRKPGSHTRNLLRVKRGIDMVKVLFEQIL 172

Query: 120 AAE 122
             E
Sbjct: 173 VTE 175

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	169
TAIR|locus:2061529	206	ACD11 "ACCELERATED CELL DEATH	0.721	0.592	0.721	3.6e-41
TAIR|locus:2135252	229	AT4G39670 [Arabidopsis thalian	0.792	0.585	0.459	1.3e-27
FB|FBgn0050392	223	CG30392 [Drosophila melanogast	0.538	0.408	0.31	0.00087

TAIR|locus:2061529 ACD11 "ACCELERATED CELL DEATH 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 88/122 (72%), Positives = 101/122 (82%)

Query:     1 MAGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMD 60
             MA ++ DKPL KIS +FK+LA  VNS   +V +  FS ACS VSPLFGCLGIAFKFAEMD
Sbjct:     1 MADSEADKPLRKISAAFKKLAIIVNSPNPEVPVTQFSHACSLVSPLFGCLGIAFKFAEMD 60

Query:    61 YVAKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILA 120
             YVAKVDDL  AS SI TL  ++D+DIE +CVRKAGSHTRNLLRVKRGLDMV+VLFEQI+A
Sbjct:    61 YVAKVDDLVRASSSISTLVVMMDKDIEADCVRKAGSHTRNLLRVKRGLDMVKVLFEQIIA 120

Query:   121 AE 122
             +E
Sbjct:   121 SE 122

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0017089 "glycolipid transporter activity" evidence=IEA

GO:0046836 "glycolipid transport" evidence=IEA

GO:0051861 "glycolipid binding" evidence=IEA

GO:0008219 "cell death" evidence=IMP

GO:0009751 "response to salicylic acid stimulus" evidence=IMP

GO:0009816 "defense response to bacterium, incompatible interaction" evidence=IMP

GO:0010175 "sphingosine transmembrane transporter activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0016192 "vesicle-mediated transport" evidence=RCA

TAIR|locus:2135252 AT4G39670 [Arabidopsis thaliana (taxid:3702)]

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 68/148 (45%), Positives = 98/148 (66%)

Query:     9 PLTKISESFKELAATVNSQAAD------VELAAFSRACSYVSPLFGCLGIAFKFAEMDYV 62
             PL+ I+E+F++LA  V  Q +D      + L  F  AC++VS LF CLG AFKFAEM+Y+
Sbjct:    27 PLSVITEAFEDLADLVKPQRSDEIDEDELRLDDFCSACTHVSVLFNCLGFAFKFAEMEYI 86

Query:    63 AKVDDLAEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAE 122
             AKV DL EASK+  TL +++D D+E   V+  GSH+RNL RV++GLD++R +FEQ L A+
Sbjct:    87 AKVKDLVEASKTFETLHNILDLDVEKETVKTPGSHSRNLRRVRQGLDLIRAIFEQFLIAD 146

Query:   123 YVYQHGKFLKGSSIQGLHTSICSP--SW 148
               Y     LK ++    +T +C+P  +W
Sbjct:   147 D-YS----LKDAATTA-YTEVCAPFHTW 168

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0017089 "glycolipid transporter activity" evidence=IEA

GO:0046836 "glycolipid transport" evidence=IEA

GO:0051861 "glycolipid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006984 "ER-nucleus signaling pathway" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0052542 "defense response by callose deposition" evidence=RCA

FB|FBgn0050392 CG30392 [Drosophila melanogaster (taxid:7227)]

 Score = 102 (41.0 bits), Expect = 0.00087, P = 0.00087
 Identities = 31/100 (31%), Positives = 48/100 (48%)

Query:    30 DVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDL-------AEASKSILTLQSVI 82
             DV+L A+  A   +   F  +G  F F   D  +K+D L       AE  +   T ++++
Sbjct:    38 DVQLDAYLAAYEEIMKFFQLMGSVFSFVSSDVRSKIDILYALRAKDAEEQEHFNTFRTML 97

Query:    83 DRDIEGNCVRKAG--SHTRNLLRVKRGLDMVRVLFEQILA 120
             D + E   + + G  S +R LLR+ RGLD V     +I A
Sbjct:    98 DYEKEAQLLTQKGYVSGSRTLLRLHRGLDFVYEFLNRIQA 137


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.133   0.393    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      169       169   0.00082  108 3  11 22  0.37    32
                                                     31  0.47    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  590 (63 KB)
  Total size of DFA:  144 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.49u 0.10s 14.59t   Elapsed:  00:00:00
  Total cpu time:  14.49u 0.10s 14.59t   Elapsed:  00:00:00
  Start:  Fri May 10 04:24:21 2013   End:  Fri May 10 04:24:21 2013

GO:0005737 "cytoplasm" evidence=IEA

GO:0051861 "glycolipid binding" evidence=IEA

GO:0046836 "glycolipid transport" evidence=IEA

GO:0017089 "glycolipid transporter activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pm.C_LG_VI0173 hypothetical protein (206 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	169
pfam08718	148	pfam08718, GLTP, Glycolipid transfer protein (GLTP	1e-25

>gnl|CDD|204041 pfam08718, GLTP, Glycolipid transfer protein (GLTP)

 Score = 95.0 bits (237), Expect = 1e-25
 Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 4/98 (4%)

Query: 30  DVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAEASKS----ILTLQSVIDRD 85
           D+    F  AC  +   F  LG AF F + D    +  L +  +S      TLQ ++ ++
Sbjct: 2   DIPTKPFLEACEELVKFFDKLGTAFSFVKKDIKGNITKLEKRYESDPEEYKTLQDLVLKE 61

Query: 86  IEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEY 123
            E    +K GS TR LL +KRGLD ++V  E++L    
Sbjct: 62  KENGLAKKKGSATRGLLWLKRGLDFIKVFLERLLTDPD 99

GLTP is a cytosolic protein that catalyzes the intermembrane transfer of glycolipids. Length = 148

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	169
PF08718	149	GLTP: Glycolipid transfer protein (GLTP); InterPro	100.0
KOG4189	209	consensus Uncharacterized conserved protein [Funct	100.0
KOG3221	199	consensus Glycolipid transfer protein [Carbohydrat	99.97

>PF08718 GLTP: Glycolipid transfer protein (GLTP); InterPro: IPR014830 Glycolipid transfer protein (GLTP) is a cytosolic protein that catalyses the intermembrane transfer of glycolipids such as glycosphingolipids, glyceroglycolipids, and possibly glucosylceramides, but not of phospholipids

Probab=100.00  E-value=8.2e-39  Score=250.65  Aligned_cols=131  Identities=24%  Similarity=0.378  Sum_probs=116.9

Q ss_pred             CCcChHHHHHHHhHHHHHHhhcCccchhhHhhHHhhHHHHH-----hccccchhHHHHHHHHHhcCCccCCCCcchhHHH
Q 030929           29 ADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLA-----EASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLR  103 (169)
Q Consensus        29 ~~I~t~~FL~a~~~l~~lfd~LG~~F~fV~~Dv~~kI~~L~-----~~~~~y~TL~~mv~~E~~~~~~~k~~S~srtLLr  103 (169)
                      ++|++++||+||++|++|||.||++|+||++||.+||++|+     .+|+.|.||++||++|+++|++++++||||+|||
T Consensus         1 n~i~~~~fl~a~~~l~~~~~~lG~~f~~v~~Dv~~ni~~l~~~~~~~~~~~~~tl~~~v~~E~~~~~~~~~~s~s~~LLw   80 (149)
T PF08718_consen    1 NDIDTEPFLEACRELVKFFDKLGTVFSFVKSDVQGNIKKLRKAYQEEDPEKYKTLESMVDYEVENGTHKKKGSGSRTLLW   80 (149)
T ss_dssp             SEEBHHHHHHHHTTSHHHHCCSSGGGHHHHHHHHHHHHHHHHHH-HHSTTTTSBHHHHHHHHHHHHGGGTSSHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCChhhhccHHHHHHHHHHHhcccccccHHHHHHH
Confidence            47999999999999999999999999999999999999994     5678999999999999999999988999999999


Q ss_pred             HhhHHHHHHHHHHHHHhCcchh---hhhhhhcccccccccccccchhhhhHHhhhcccC
Q 030929          104 VKRGLDMVRVLFEQILAAEYVY---QHGKFLKGSSIQGLHTSICSPSWMGYKKSCCRRD  159 (169)
Q Consensus       104 L~RaL~Fi~~fl~~l~~~~~~~---~~~~f~~~~~l~~~h~~~~~~~~~~~~~~~~~~~  159 (169)
                      |||||+|+..||+++.++++++   ..+.-+|..||++||+|+||.+|.++++++|-++
T Consensus        81 L~RaL~Fi~~~l~~l~~~~~~~~~~~~~~~AY~~tL~~yH~w~vr~~~~~a~~~~P~R~  139 (149)
T PF08718_consen   81 LHRALEFIVAFLENLLESPDDEKLSDAAREAYDKTLAPYHGWIVRKAFKLALKALPSRS  139 (149)
T ss_dssp             HHHHHHHHHHHHHHHHTS--BTBHHHHHHHHHHHHTGGGB-HHHHHHHHHHHHT--BHH
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCHH
Confidence            9999999999999999986655   5556666789999999999999999999999763

The GLTP protein consists of a single domain with a multi-helical structure consisting of two layers of orthogonally packed helices [, ]. The GLTP domain is also found in trans-Golgi network proteins involved in Golgi-to-cell-surface membrane traffic [].; GO: 0017089 glycolipid transporter activity, 0051861 glycolipid binding, 0046836 glycolipid transport, 0005737 cytoplasm; PDB: 2BV7_A 1TFJ_A 1WBE_A 3KV0_A 3RWV_B 2EVD_A 2EUK_A 3RZN_A 2EVL_A 3S0K_A ....

>KOG4189 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=1.2e-32  Score=223.18  Aligned_cols=156  Identities=32%  Similarity=0.419  Sum_probs=137.3

Q ss_pred             CCCCCCChhHHHHHHHHhHhhhcCCCCCcChHHHHHHHhHHHHHHhhcCccchhhHhhHHhhHHHHHh-ccccchhHHHH
Q 030929            3 GTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAE-ASKSILTLQSV   81 (169)
Q Consensus         3 ~~~~~f~l~~v~~~F~~~~~~v~~~~~~I~t~~FL~a~~~l~~lfd~LG~~F~fV~~Dv~~kI~~L~~-~~~~y~TL~~m   81 (169)
                      +.+..-++.++...|+.+..++..++++|++++|+.||+++++||++||++|+||.+|+.+||++|.+ .+....|+..|
T Consensus         3 ~~~~~~~~~~i~~~~~~i~~~v~~e~~eV~L~~f~~a~e~v~~~f~~lG~iF~Fve~Dv~aKid~L~~l~ssd~et~rti   82 (209)
T KOG4189|consen    3 CMEQLGPLPKILQAFKTIEKSVIEEDNEVDLDQFLLAYEEVCKFFGCLGTIFSFVEKDVRAKIDDLVELRSSDPETYRTI   82 (209)
T ss_pred             chhhccchHHHHHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHH
Confidence            44556788899999999999999999999999999999999999999999999999999999999953 33337788888


Q ss_pred             HHHHHhcCCccCCC--CcchhHHHHhhHHHHHHHHHHHHHhCcchh---hhhhhhcccccccccccccchhhhhHHhhhc
Q 030929           82 IDRDIEGNCVRKAG--SHTRNLLRVKRGLDMVRVLFEQILAAEYVY---QHGKFLKGSSIQGLHTSICSPSWMGYKKSCC  156 (169)
Q Consensus        82 v~~E~~~~~~~k~~--S~srtLLrL~RaL~Fi~~fl~~l~~~~~~~---~~~~f~~~~~l~~~h~~~~~~~~~~~~~~~~  156 (169)
                      ++.+.++..+.+++  ||||+||||+|||+|+..||+++.++++++   +.++-.|..++.+||+|+||..-.++|-+=|
T Consensus        83 ld~~~e~~~~~~~G~~Sgtr~Llrl~R~LefV~efl~~i~as~nD~s~~diakesYd~~lakhHsW~IRtAV~~amYtLP  162 (209)
T KOG4189|consen   83 LDLDTEESEVGTIGNQSGTRNLLRLNRALEFVIEFLDQIFASTNDESLKDIAKESYDKTLAKHHSWAIRTAVAAAMYTLP  162 (209)
T ss_pred             HHHHHHHhHhcccCccccchHHHHHHhhHHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhhccccHHHHHHHHHHHHhCC
Confidence            88888888888877  999999999999999999999999987665   4445566779999999999999999999888


Q ss_pred             cc
Q 030929          157 RR  158 (169)
Q Consensus       157 ~~  158 (169)
                      .+
T Consensus       163 TR  164 (209)
T KOG4189|consen  163 TR  164 (209)
T ss_pred             Cc
Confidence            65

>KOG3221 consensus Glycolipid transfer protein [Carbohydrate transport and metabolism]

Probab=99.97  E-value=1.4e-32  Score=222.98  Aligned_cols=133  Identities=21%  Similarity=0.293  Sum_probs=124.0

Q ss_pred             CCCCCcChHHHHHHHhHHHHHHhhcCccchhhHhhHHhhHHHHH----hccccchhHHHHHHHHHhcCCccCCCCcchhH
Q 030929           26 SQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLA----EASKSILTLQSVIDRDIEGNCVRKAGSHTRNL  101 (169)
Q Consensus        26 ~~~~~I~t~~FL~a~~~l~~lfd~LG~~F~fV~~Dv~~kI~~L~----~~~~~y~TL~~mv~~E~~~~~~~k~~S~srtL  101 (169)
                      .++++|+|.+||+||.+|++|+|+||++|+||++||+|||+++.    +++..|++||.+|+.|++....+ ++|||++|
T Consensus        13 ~~d~~i~T~~FL~ac~~i~pvid~lG~~ftpVk~Di~gNI~kv~~~y~~d~~k~~~Lq~~i~~eie~~~a~-~~sat~aL   91 (199)
T KOG3221|consen   13 PDDGKIETGPFLEACKHIVPVIDKLGAVFTPVKSDISGNITKVKKVYDTDKEKFKYLQKIVKVEIETDIAE-KVSATLAL   91 (199)
T ss_pred             CcccCCccHHHHHHHhhhhhHHHHhhhhhHhHHHHhhccHHHHHHHHhcChHHHHHHHHHHHHHHHHhhcc-cchhhHHH
Confidence            67899999999999999999999999999999999999999994    79999999999999999998877 89999999


Q ss_pred             HHHhhHHHHHHHHHHHHHhCcch--hhhhhhhcccccccccccccchhhhhHHhhhcccC
Q 030929          102 LRVKRGLDMVRVLFEQILAAEYV--YQHGKFLKGSSIQGLHTSICSPSWMGYKKSCCRRD  159 (169)
Q Consensus       102 LrL~RaL~Fi~~fl~~l~~~~~~--~~~~~f~~~~~l~~~h~~~~~~~~~~~~~~~~~~~  159 (169)
                      |||+|||+|+..||++|.++++.  ..+..-+|+.||++||+||++..|.++-++.|-++
T Consensus        92 LWLkRgldF~~~~l~~l~~~~~~~l~~av~daY~kTLK~~HGwI~q~~FkvaLklvP~r~  151 (199)
T KOG3221|consen   92 LWLKRGLDFTLAFLQELVNGESDCLIQAVADAYEKTLKKYHGWIVQSTFKVALKLVPDRK  151 (199)
T ss_pred             HHHHhHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHcCcHH
Confidence            99999999999999999999876  46667777899999999999999999999988653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	169
2i3f_A	224	Glycolipid transfer-like protein; GLTP superfamily	2e-21
3kv0_A	209	HET-C2; GLTP, glycolipid transfer protein, transpo	6e-18
3rzn_A	209	GLTP, glycolipid transfer protein; GLTP-fold, lipi	2e-17

>2i3f_A Glycolipid transfer-like protein; GLTP superfamily, GLTP-like, protein structure initiative, PSI; 1.38A {Galdieria sulphuraria} PDB: 2q52_A Length = 224

 Score = 85.5 bits (211), Expect = 2e-21
 Identities = 22/120 (18%), Positives = 44/120 (36%), Gaps = 10/120 (8%)

Query: 5   DNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAK 64
           +  +    I   +K++    +     V L  F  A   V  +    G  F+  + D    
Sbjct: 7   EEKEDFGIIVILWKQVTVKED---GKVPLEPFLTAAKEVLRVVDAFGSGFRIVKNDIAGN 63

Query: 65  VDDLAEASKSI--LTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAE 122
           +  L  A++++   TLQ +I  +         G  T  LL +KR    +     +++  +
Sbjct: 64  IKKLYRANQTVHAETLQELIIAENS-----PDGLATVALLWLKRAFQFIASFLRRLVVTD 118

>3kv0_A HET-C2; GLTP, glycolipid transfer protein, transport protein; HET: MLY; 1.90A {Podospora anserina} Length = 209

 Score = 76.3 bits (187), Expect = 6e-18
 Identities = 21/114 (18%), Positives = 39/114 (34%), Gaps = 2/114 (1%)

Query: 10  LTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLG-IAFKFAEMDYVAKVDDL 68
           L     SF ++          +  A F  A   ++ +F  LG IAF     D +  V+ +
Sbjct: 17  LETFXXSFVDVPID-AEXGNAISTAEFLEAAESLTTMFDVLGSIAFSPVXTDMLGNVEXI 75

Query: 69  AEASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAE 122
                +       I   +       + + T  LL + RGL+   +     + + 
Sbjct: 76  RXRMLAAPLESQNIQDLVRNELXTXSHTATEGLLWLVRGLEFTCIALSXNIGST 129

>3rzn_A GLTP, glycolipid transfer protein; GLTP-fold, lipid transport; HET: CIS; 1.10A {Homo sapiens} PDB: 1sx6_A* 2euk_A* 2eum_A* 2evd_A* 2evl_A* 2evs_A* 1swx_A 3rwv_A* 3s0k_A* 3s0i_A* 2evt_A* 1wbe_A* 3ric_A* 1tfj_A* 2bv7_A* Length = 209

 Score = 75.2 bits (184), Expect = 2e-17
 Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 7/128 (5%)

Query: 13  ISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLG-IAFKFAEMDYVAKVDDLAEA 71
           ++   + L   + +    +E   F  A S++ P F CLG   F   + D    +  +   
Sbjct: 1   MALLAEHLLKPLPA-DKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAV 59

Query: 72  SKS----ILTLQSVIDRDIEGNCVRKAG-SHTRNLLRVKRGLDMVRVLFEQILAAEYVYQ 126
             +      TLQ++++ + E           T  L+ +KRGL  ++V  + I   E    
Sbjct: 60  YDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDEN 119

Query: 127 HGKFLKGS 134
           H   ++ +
Sbjct: 120 HPNLIRVN 127

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	169
2i3f_A	224	Glycolipid transfer-like protein; GLTP superfamily	100.0
3kv0_A	209	HET-C2; GLTP, glycolipid transfer protein, transpo	100.0
3rzn_A	209	GLTP, glycolipid transfer protein; GLTP-fold, lipi	100.0

>2i3f_A Glycolipid transfer-like protein; GLTP superfamily, GLTP-like, protein structure initiative, PSI; 1.38A {Galdieria sulphuraria} PDB: 2q52_A

Probab=100.00  E-value=8.8e-41  Score=276.54  Aligned_cols=148  Identities=18%  Similarity=0.262  Sum_probs=129.5

Q ss_pred             CCCCCChhHHHHHHHHhHhhhcCCCCCcChHHHHHHHhHHHHHHhhcCccchhhHhhHHhhHHHHH-hccc-cchhHHHH
Q 030929            4 TDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLA-EASK-SILTLQSV   81 (169)
Q Consensus         4 ~~~~f~l~~v~~~F~~~~~~v~~~~~~I~t~~FL~a~~~l~~lfd~LG~~F~fV~~Dv~~kI~~L~-~~~~-~y~TL~~m   81 (169)
                      .+..|+|++|..+|+++..   .++++|+|.+||+||++|++|||+||++|+||++||.+||++|. .+|. +|.||++|
T Consensus         6 ~~~~f~l~~v~~~F~~~~~---~~~~~I~t~~FL~a~~~l~~~fd~LG~~F~~v~~Dv~gnI~kL~~~~p~~~~~TL~~m   82 (224)
T 2i3f_A            6 NEEKEDFGIIVILWKQVTV---KEDGKVPLEPFLTAAKEVLRVVDAFGSGFRIVKNDIAGNIKKLYRANQTVHAETLQEL   82 (224)
T ss_dssp             -----CTTHHHHHHHTSCC---CTTCCCBHHHHHHHHHHTHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTTTCCSBHHHH
T ss_pred             cccCCCHHHHHHHHHHhhc---cCCCCccHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhCccchhhhHHHH
Confidence            4677999999999999982   23689999999999999999999999999999999999999994 5688 99999999


Q ss_pred             HHHHHhcCCccCCCCcchhHHHHhhHHHHHHHHHHHHHhCcc-hhhhhhhhcccccccccccccchhhhhHHhhhcccC
Q 030929           82 IDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEY-VYQHGKFLKGSSIQGLHTSICSPSWMGYKKSCCRRD  159 (169)
Q Consensus        82 v~~E~~~~~~~k~~S~srtLLrL~RaL~Fi~~fl~~l~~~~~-~~~~~~f~~~~~l~~~h~~~~~~~~~~~~~~~~~~~  159 (169)
                      |++|+ +    +++||||+||||||||+|++.||+++.++++ -...+.-+|+.||++||+|+||++|.+||++||-+.
T Consensus        83 v~~E~-~----k~~S~tr~LLwL~RaL~Fi~~~l~~l~~~~~~l~~~~~~AY~~tL~~yHgwivr~af~~Am~a~P~R~  156 (224)
T 2i3f_A           83 IIAEN-S----PDGLATVALLWLKRAFQFIASFLRRLVVTDKSLEQCVTEAYNCTLRPCHSAVIQKVFWGGVKLAPSRE  156 (224)
T ss_dssp             HHHHC-S----TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCHHHHHHHHHHTTTGGGSCHHHHHHHHHHHTTCCCHH
T ss_pred             HHHHH-h----cCCchhHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhcCCchHHHHHHHHHHHhCCCHH
Confidence            99999 4    5789999999999999999999999999886 234445566789999999999999999999999764

>3kv0_A HET-C2; GLTP, glycolipid transfer protein, transport protein; HET: MLY; 1.90A {Podospora anserina}

Probab=100.00  E-value=2e-40  Score=271.88  Aligned_cols=143  Identities=17%  Similarity=0.277  Sum_probs=128.7

Q ss_pred             CChhHHHHHHHHhHhhhcCC---CCCcChHHHHHHHhHHHHHHhhcCc-cchhhHhhHHhhHHHHH----hccccchhHH
Q 030929            8 KPLTKISESFKELAATVNSQ---AADVELAAFSRACSYVSPLFGCLGI-AFKFAEMDYVAKVDDLA----EASKSILTLQ   79 (169)
Q Consensus         8 f~l~~v~~~F~~~~~~v~~~---~~~I~t~~FL~a~~~l~~lfd~LG~-~F~fV~~Dv~~kI~~L~----~~~~~y~TL~   79 (169)
                      ..+++|..+|.++.    .+   +++|+|.+||+||++|++|||+||+ +|+||++||.+||++|+    .+|++|.||+
T Consensus        15 tff~~~~~~F~~~~----~~~~~~~~I~t~~fL~a~~~l~~~fd~LG~~~F~~v~~D~~~nI~kl~~~~~~~~~~~~tL~   90 (209)
T 3kv0_A           15 TFLETFXXSFVDVP----IDAEXGNAISTAEFLEAAESLTTMFDVLGSIAFSPVXTDMLGNVEXIRXRMLAAPLESQNIQ   90 (209)
T ss_dssp             CGGGGCSSCGGGCC----EEGGGTSEEBHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHSGGGCSBHH
T ss_pred             ccHHHHHhhHHhCC----CccccCCCccHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHhHHHHHHHhhcCchhhchHH
Confidence            44899999999987    44   7899999999999999999999999 99999999999999995    5799999999


Q ss_pred             HHHHHHHhcCCccCCCCcchhHHHHhhHHHHHHHHHHHHHhCcchhhh--hhhhcccccccccccccchhhhhHHhhhcc
Q 030929           80 SVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEYVYQH--GKFLKGSSIQGLHTSICSPSWMGYKKSCCR  157 (169)
Q Consensus        80 ~mv~~E~~~~~~~k~~S~srtLLrL~RaL~Fi~~fl~~l~~~~~~~~~--~~f~~~~~l~~~h~~~~~~~~~~~~~~~~~  157 (169)
                      +||++|+++    +++||||+||||||||+|++.||+++. +++.+..  ..-+|+.||++||+|+||++|.++|++||-
T Consensus        91 ~mv~~E~~~----~~~S~tr~LLwL~RaL~fi~~~l~~l~-~~~~~l~~~~~~AY~~tL~~yHgw~vr~af~~A~~a~P~  165 (209)
T 3kv0_A           91 DLVRNELXT----XSHTATEGLLWLVRGLEFTCIALSXNI-GSTEELADSFRGSYRVTLXPHHSFLVXPIFSAAMSACPY  165 (209)
T ss_dssp             HHHHHHTCC-----CCHHHHHHHHHHHHHHHHHHHHHHHH-TSCCCHHHHHHHHHHHTTGGGSCTTTHHHHHHHHHTCCC
T ss_pred             HHHHHHHHh----cccchHHHHHHHHHHHHHHHHHHHHHc-CCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhCCc
Confidence            999999987    478999999999999999999999999 5555544  455557899999999999999999999998


Q ss_pred             cC
Q 030929          158 RD  159 (169)
Q Consensus       158 ~~  159 (169)
                      ++
T Consensus       166 R~  167 (209)
T 3kv0_A          166 RX  167 (209)
T ss_dssp             HH
T ss_pred             HH
Confidence            74

>3rzn_A GLTP, glycolipid transfer protein; GLTP-fold, lipid transport; HET: CIS; 1.10A {Homo sapiens} PDB: 1sx6_A* 2euk_A* 2eum_A* 2evd_A* 2evl_A* 2evs_A* 1swx_A 3rwv_A* 3s0k_A* 3s0i_A* 2evt_A* 1wbe_A* 3ric_A* 1tfj_A* 2bv7_A*

Probab=100.00  E-value=2.4e-39  Score=265.33  Aligned_cols=133  Identities=20%  Similarity=0.271  Sum_probs=120.9

Q ss_pred             CCCCcChHHHHHHHhHHHHHHhhcCc-cchhhHhhHHhhHHHHH----hccccchhHHHHHHHHHhcCCccC-CCCcchh
Q 030929           27 QAADVELAAFSRACSYVSPLFGCLGI-AFKFAEMDYVAKVDDLA----EASKSILTLQSVIDRDIEGNCVRK-AGSHTRN  100 (169)
Q Consensus        27 ~~~~I~t~~FL~a~~~l~~lfd~LG~-~F~fV~~Dv~~kI~~L~----~~~~~y~TL~~mv~~E~~~~~~~k-~~S~srt  100 (169)
                      ++++|+|.+||+||++|++|||+||+ +|+||++||.+||++|+    .+|++|.||++||++|+++|++.+ +.||||+
T Consensus        14 ~~~~i~t~~fL~a~~~l~~~~d~LG~~~F~~v~~D~~~nI~kl~~~~~~~~~~~~tL~~mv~~E~~~~~~~~~~~s~tr~   93 (209)
T 3rzn_A           14 ADKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLA   93 (209)
T ss_dssp             TTCCCBHHHHHHHHTTSGGGGGGSSCGGGHHHHHHHHHHHHHHHHHHHHCTTTTSBHHHHHHHHHHHHGGGTTSSHHHHH
T ss_pred             CCCCcCHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHhcCchhhccHHHHHHHHHHcCCcccCCchHHHH
Confidence            57899999999999999999999999 89999999999999995    589999999999999999988753 6799999


Q ss_pred             HHHHhhHHHHHHHHHHHHHhCcchh-------hhhhhhcccccccccccccchhhhhHHhhhcccC
Q 030929          101 LLRVKRGLDMVRVLFEQILAAEYVY-------QHGKFLKGSSIQGLHTSICSPSWMGYKKSCCRRD  159 (169)
Q Consensus       101 LLrL~RaL~Fi~~fl~~l~~~~~~~-------~~~~f~~~~~l~~~h~~~~~~~~~~~~~~~~~~~  159 (169)
                      ||||||||+|++.||+++.++++++       ....-+|+.||++||+|+||++|.++|++||-+.
T Consensus        94 LLwL~R~L~fi~~~l~~l~~~~~~~~~~~~l~~~~~~AY~~tL~~~H~w~vr~a~~~A~~a~P~R~  159 (209)
T 3rzn_A           94 LMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKS  159 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCTTSTTCCHHHHHHHHHHHTGGGSCHHHHHHHHHHGGGCCCHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcccccchhHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHhCCCHH
Confidence            9999999999999999999876542       3445566789999999999999999999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	169
d1swxa_	202	a.224.1.1 (A:) Glycolipid transfer protein, GLTP {	3e-21

>d1swxa_ a.224.1.1 (A:) Glycolipid transfer protein, GLTP {Human (Homo sapiens) [TaxId: 9606]} Length = 202

class: All alpha proteins
fold: Glycolipid transfer protein, GLTP
superfamily: Glycolipid transfer protein, GLTP
family: Glycolipid transfer protein, GLTP
domain: Glycolipid transfer protein, GLTP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.8 bits (207), Expect = 3e-21
 Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 6/111 (5%)

Query: 30  DVELAAFSRACSYVSPLFGCLG-IAFKFAEMDYVAKVDDLAEASKS----ILTLQSVIDR 84
            +E   F  A S++ P F CLG   F   + D    +  +     +      TLQ++++ 
Sbjct: 10  QIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEV 69

Query: 85  DIEGNCVRKAGSH-TRNLLRVKRGLDMVRVLFEQILAAEYVYQHGKFLKGS 134
           + E           T  L+ +KRGL  ++V  + I   E    H   ++ +
Sbjct: 70  EKEMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVN 120

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	169
d1swxa_	202	Glycolipid transfer protein, GLTP {Human (Homo sap	100.0

>d1swxa_ a.224.1.1 (A:) Glycolipid transfer protein, GLTP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Glycolipid transfer protein, GLTP
superfamily: Glycolipid transfer protein, GLTP
family: Glycolipid transfer protein, GLTP
domain: Glycolipid transfer protein, GLTP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-38  Score=256.91  Aligned_cols=133  Identities=20%  Similarity=0.272  Sum_probs=120.4

Q ss_pred             CCCCcChHHHHHHHhHHHHHHhhcCc-cchhhHhhHHhhHHHHH----hccccchhHHHHHHHHHhcCCccCC-CCcchh
Q 030929           27 QAADVELAAFSRACSYVSPLFGCLGI-AFKFAEMDYVAKVDDLA----EASKSILTLQSVIDRDIEGNCVRKA-GSHTRN  100 (169)
Q Consensus        27 ~~~~I~t~~FL~a~~~l~~lfd~LG~-~F~fV~~Dv~~kI~~L~----~~~~~y~TL~~mv~~E~~~~~~~k~-~S~srt  100 (169)
                      +|++|+|.+||+||++|++|||.||+ +|+||++||.+||++|+    .+|++|.||++||++|++.++.+++ +||||+
T Consensus         7 ~d~~i~t~~fL~a~~~i~~~~~~lG~~~F~~v~~Dv~gnI~kl~~~~~~~~~~~~tL~~mv~~E~~~~~~k~~~~s~t~~   86 (202)
T d1swxa_           7 ADKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLA   86 (202)
T ss_dssp             TTCCCBHHHHHHHHTTSGGGGGTTSSCSSHHHHHHHHHHHHHHHHHHHHCTTTTSBHHHHHHHHHHHHGGGTTSSHHHHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHcCcHHhhHHHHHHHHHHHhccccCCCCchHHH
Confidence            57899999999999999999999995 99999999999999995    7899999999999999998877654 589999


Q ss_pred             HHHHhhHHHHHHHHHHHHHhCcchh-------hhhhhhcccccccccccccchhhhhHHhhhcccC
Q 030929          101 LLRVKRGLDMVRVLFEQILAAEYVY-------QHGKFLKGSSIQGLHTSICSPSWMGYKKSCCRRD  159 (169)
Q Consensus       101 LLrL~RaL~Fi~~fl~~l~~~~~~~-------~~~~f~~~~~l~~~h~~~~~~~~~~~~~~~~~~~  159 (169)
                      ||||||||+|++.||+++.++++++       .+++-+|..||++||+|+||.+|.++|++||-+.
T Consensus        87 LLwL~RaL~Fi~~fl~~l~~~~~~~~~~~~l~~~~~~AY~~tL~~yH~w~vr~~~~~A~~~~P~R~  152 (202)
T d1swxa_          87 LMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKS  152 (202)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCTTSTTCCHHHHHHHHHHHTGGGCCHHHHHHHHHHHHTCCCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhCCCHH
Confidence            9999999999999999999876543       3456677889999999999999999999999754