Citrus Sinensis ID: 031406

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Protein Sequence
MSVEGGILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Secondary Structure (PSIPRED)
cccccccEEEccccccHHHHHHccccccccccccccccEEcEEEEEcccHHHHHHHHHHccccEEcccccccccccEEEEEEcccEEEEEEEccccccccccccccccccEEEEEEccHHHHHHHHHHcccEEEEccccccEEEEEcccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccEEEEcccccccEEEEcccccccccccccccccEEEEEEEEEccHHHHHHHHHHHHccEEcHccHHHcccccHccccccccEEEEEcccccccccccccHccccccEEEEEccHHHHHHHHHHcccEEEEEccccEEEEEcccccccEEEEEEcc
Coil and Loop (DISEMBL)
msveggilkkepirdsdkietatngkhnikeiRDYGVVSVHHVGILCENLERSLEFYQNILGLeinearphdklpyrgaWLWVGAEMIhlmelpnpdplsgrpehggrdrhtciaIRDVSKLKMILDKAGisytlsksgrpaiftrdpdanaleftqvdg
Flexible Loop (DISEMBL)
msveggilkkepirdsdkietatngkhnikeiRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIsytlsksgrpaiftrdpdanaleftqvdg
Low Complexity Region (SEG)
MSVEGGILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Disordered region (IsUnstruct)
**************************HNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL*****************HTCIAIRDVSKLKMILDKAGISYTLS************************
Disordered Region (DISOPRED)
********KKEPI*************************SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD*
Disordered Region (DISEMBL)
MSVEGGILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS********DRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Disordered Region (DISPRO)
*****GILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSVEGGILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	160	2.2.26 [Sep-21-2011]
P45871	128	Uncharacterized protein Y	yes	no	0.737	0.921	0.298	5e-07
Q96PE7	176	Methylmalonyl-CoA epimera	yes	no	0.643	0.585	0.304	4e-05
Q9D1I5	178	Methylmalonyl-CoA epimera	yes	no	0.668	0.601	0.271	0.0004

>sp|P45871|YWKD_BACSU Uncharacterized protein YwkD OS=Bacillus subtilis (strain 168) GN=ywkD PE=4 SV=1

 Score = 53.9 bits (128), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 39  SVHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 97
           S+HH+ I+C + E+S  FY + LG + I E    ++  Y+      G+ +I L   P+P 
Sbjct: 5   SIHHIAIICSDYEKSKAFYVHKLGFQVIQETYREERGSYKLDLSLNGSYVIELFSFPDPP 64

Query: 98  PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY----TLSKSGRPAIFTRDPDANAL 153
               RPE  G  RH    +  + K    L + GI      T   +G+   F  DPD   L
Sbjct: 65  ERQTRPEAAGL-RHLAFTVGSLDKAVQELHEKGIETEPIRTDPLTGKRFTFFFDPDQLPL 123

Query: 154 EFTQ 157
           E  +
Sbjct: 124 ELYE 127

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|Q96PE7|MCEE_HUMAN Methylmalonyl-CoA epimerase, mitochondrial OS=Homo sapiens GN=MCEE PE=1 SV=1

 Score = 47.4 bits (111), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 22/125 (17%)

Query: 40  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHL----MELPN 95
           ++HV I   +LE++  FY+NILG +++EA P   LP  G    V    ++L    MEL +
Sbjct: 48  LNHVAIAVPDLEKAAAFYKNILGAQVSEAVP---LPEHG----VSVVFVNLGNTKMELLH 100

Query: 96  P----DPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIF 144
           P     P++G  +    G   H CI + +++   M L K  I        +   G+P IF
Sbjct: 101 PLGRDSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIF 160

Query: 145 TRDPD 149
               D
Sbjct: 161 LHPKD 165

Homo sapiens (taxid: 9606)

EC: 5

EC: .

EC: 1

EC: .

EC: 9

EC: 9

EC: .

EC: 1

>sp|Q9D1I5|MCEE_MOUSE Methylmalonyl-CoA epimerase, mitochondrial OS=Mus musculus GN=Mcee PE=2 SV=1

 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 22/129 (17%)

Query: 40  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHL----MELPN 95
           ++HV +   +LE++  FY+++LG +++E  P   LP  G    V    ++L    MEL +
Sbjct: 50  LNHVAVAVPDLEKASSFYRDVLGAQVSEVVP---LPEHG----VSVVFVNLGNTKMELLH 102

Query: 96  P----DPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIF 144
           P     P++G  +    G   H CI + ++S   M L K  I        +   G+P IF
Sbjct: 103 PLGSDSPITGFLQKNKAGGMHHVCIEVDNISAAVMDLKKKKIRSLSDEAKIGAHGKPVIF 162

Query: 145 TRDPDANAL 153
               D   +
Sbjct: 163 LHPKDCGGV 171

Mus musculus (taxid: 10090)

EC: 5

EC: .

EC: 1

EC: .

EC: 9

EC: 9

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	160
388493084	200	unknown [Lotus japonicus]	0.906	0.725	0.779	2e-67
359807103	206	uncharacterized protein LOC100805881 [Gl	0.906	0.703	0.767	3e-66
15242020	197	Lactoylglutathione lyase / glyoxalase I	0.781	0.634	0.928	1e-65
297796591	196	lactoylglutathione lyase family protein	0.781	0.637	0.928	1e-65
356547897	209	PREDICTED: uncharacterized protein LOC10	0.818	0.626	0.870	7e-65
226495911	193	glyoxalase/bleomycin resistance protein/	0.781	0.647	0.92	7e-65
449489903	206	PREDICTED: uncharacterized LOC101203815	0.793	0.616	0.913	1e-64
449452528	175	PREDICTED: uncharacterized protein LOC10	0.793	0.725	0.913	1e-64
358347730	129	Glyoxalase/bleomycin resistance protein/	0.781	0.968	0.904	6e-64
297738629	199	unnamed protein product [Vitis vinifera]	0.912	0.733	0.731	7e-63

>gi|388493084|gb|AFK34608.1| unknown [Lotus japonicus]

 Score =  259 bits (662), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 124/159 (77%), Positives = 135/159 (84%), Gaps = 14/159 (8%)

Query: 1   MSVEGGILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNI 60
           ++VEG +L KE                 I E  DYGVVS+HHVGILCENLER L+FYQN+
Sbjct: 55  VAVEGDVLDKE--------------SEPINEGSDYGVVSIHHVGILCENLERPLDFYQNV 100

Query: 61  LGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS 120
           LGLEINEARPHDKLPYRGAWLWVG+EMIHLMELPNPDPL+GRP+HGGRDRHTCIAIRDVS
Sbjct: 101 LGLEINEARPHDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPQHGGRDRHTCIAIRDVS 160

Query: 121 KLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD 159
           KLK ILDKAGISYTLS+SGRPAIFTRDPDANALEFTQ+D
Sbjct: 161 KLKAILDKAGISYTLSRSGRPAIFTRDPDANALEFTQID 199

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807103|ref|NP_001241602.1| uncharacterized protein LOC100805881 [Glycine max] gi|255638057|gb|ACU19343.1| unknown [Glycine max]

 Score =  256 bits (653), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 122/159 (76%), Positives = 133/159 (83%), Gaps = 14/159 (8%)

Query: 2   SVEGGILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNIL 61
           +VEG +L+KE +              +I E  DYGVV +HHVGILCENLERSLEFYQN+L
Sbjct: 62  AVEGDVLEKESV--------------SINEESDYGVVCMHHVGILCENLERSLEFYQNVL 107

Query: 62  GLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK 121
           GL+INEARPHDKLPYRGAWLWVG+EMIHLMELPNPDPL+GR +HGGRDRHTCIAIRDVSK
Sbjct: 108 GLKINEARPHDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRAQHGGRDRHTCIAIRDVSK 167

Query: 122 LKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG 160
           LK I DKAGI YTLS SGRPAIF RDPDANALEFTQVDG
Sbjct: 168 LKAIFDKAGIPYTLSHSGRPAIFARDPDANALEFTQVDG 206

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242020|ref|NP_200514.1| Lactoylglutathione lyase / glyoxalase I family protein [Arabidopsis thaliana] gi|8777444|dbj|BAA97034.1| unnamed protein product [Arabidopsis thaliana] gi|21594695|gb|AAM66034.1| unknown [Arabidopsis thaliana] gi|88193792|gb|ABD42985.1| At5g57040 [Arabidopsis thaliana] gi|110742698|dbj|BAE99260.1| hypothetical protein [Arabidopsis thaliana] gi|332009455|gb|AED96838.1| Lactoylglutathione lyase / glyoxalase I family protein [Arabidopsis thaliana]

 Score =  254 bits (648), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 116/125 (92%), Positives = 121/125 (96%)

Query: 34  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 93
           DYGVV VHHVG+LCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG+EMIHLMEL
Sbjct: 73  DYGVVGVHHVGLLCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGSEMIHLMEL 132

Query: 94  PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL 153
           PNPDPL+GRPEHGGRDRH CIAIRDVS LK ILDKAGI+YT+SKSGRPAIFTRDPDANAL
Sbjct: 133 PNPDPLTGRPEHGGRDRHACIAIRDVSNLKEILDKAGIAYTMSKSGRPAIFTRDPDANAL 192

Query: 154 EFTQV 158
           EFTQV
Sbjct: 193 EFTQV 197

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796591|ref|XP_002866180.1| lactoylglutathione lyase family protein [Arabidopsis lyrata subsp. lyrata] gi|297312015|gb|EFH42439.1| lactoylglutathione lyase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  253 bits (647), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 116/125 (92%), Positives = 121/125 (96%)

Query: 34  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 93
           DYGVV VHHVG+LCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG+EMIHLMEL
Sbjct: 72  DYGVVGVHHVGLLCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGSEMIHLMEL 131

Query: 94  PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL 153
           PNPDPL+GRPEHGGRDRH CIAIRDVS LK ILDKAGI+YT+SKSGRPAIFTRDPDANAL
Sbjct: 132 PNPDPLTGRPEHGGRDRHACIAIRDVSNLKEILDKAGIAYTMSKSGRPAIFTRDPDANAL 191

Query: 154 EFTQV 158
           EFTQV
Sbjct: 192 EFTQV 196

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547897|ref|XP_003542341.1| PREDICTED: uncharacterized protein LOC100788142 [Glycine max]

 Score =  251 bits (641), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 114/131 (87%), Positives = 124/131 (94%)

Query: 29  IKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMI 88
           + E  DYGVV +HHVGILCENLERSL+FYQN+LGL+INEARPH+KLPYRGAWLWVG+EMI
Sbjct: 78  VNEESDYGVVCMHHVGILCENLERSLDFYQNVLGLKINEARPHNKLPYRGAWLWVGSEMI 137

Query: 89  HLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDP 148
           HLMELPNPDPL+GRP+HGGRDRHTCIAIRDVSKLK I DKAGI+YTLS SGRPAIFTRDP
Sbjct: 138 HLMELPNPDPLTGRPQHGGRDRHTCIAIRDVSKLKAIFDKAGIAYTLSHSGRPAIFTRDP 197

Query: 149 DANALEFTQVD 159
           DANALEFTQVD
Sbjct: 198 DANALEFTQVD 208

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226495911|ref|NP_001147026.1| glyoxalase/bleomycin resistance protein/dioxygenase [Zea mays] gi|195606588|gb|ACG25124.1| glyoxalase/bleomycin resistance protein/dioxygenase [Zea mays]

 Score =  251 bits (641), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 115/125 (92%), Positives = 120/125 (96%)

Query: 34  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 93
           DYGVV VHHVG+LCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG+EMIHLMEL
Sbjct: 69  DYGVVGVHHVGLLCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGSEMIHLMEL 128

Query: 94  PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL 153
           PNPDPL+GRPEHGGRDRH CIAIRDVS LK ILDKAGI+YT+SKSGRPAIFTRDPD NAL
Sbjct: 129 PNPDPLTGRPEHGGRDRHACIAIRDVSVLKEILDKAGIAYTMSKSGRPAIFTRDPDTNAL 188

Query: 154 EFTQV 158
           EFTQV
Sbjct: 189 EFTQV 193

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449489903|ref|XP_004158454.1| PREDICTED: uncharacterized LOC101203815 [Cucumis sativus]

 Score =  250 bits (639), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 116/127 (91%), Positives = 120/127 (94%)

Query: 34  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 93
           DYG V VHHVG+LCENLERSL FY NILGL+INEARPHDKLPYRGAWLWVGAEMIHLMEL
Sbjct: 80  DYGAVGVHHVGVLCENLERSLHFYLNILGLQINEARPHDKLPYRGAWLWVGAEMIHLMEL 139

Query: 94  PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL 153
           PNPDPL+GRPEHGGRDRHTC+ IRDVSKLK ILDKAGI YTLSKSGRPAIFTRDPDANAL
Sbjct: 140 PNPDPLTGRPEHGGRDRHTCLGIRDVSKLKAILDKAGIPYTLSKSGRPAIFTRDPDANAL 199

Query: 154 EFTQVDG 160
           EFTQVDG
Sbjct: 200 EFTQVDG 206

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452528|ref|XP_004144011.1| PREDICTED: uncharacterized protein LOC101203815 [Cucumis sativus]

 Score =  250 bits (638), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 116/127 (91%), Positives = 120/127 (94%)

Query: 34  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 93
           DYG V VHHVG+LCENLERSL FY NILGL+INEARPHDKLPYRGAWLWVGAEMIHLMEL
Sbjct: 49  DYGAVGVHHVGVLCENLERSLHFYLNILGLQINEARPHDKLPYRGAWLWVGAEMIHLMEL 108

Query: 94  PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL 153
           PNPDPL+GRPEHGGRDRHTC+ IRDVSKLK ILDKAGI YTLSKSGRPAIFTRDPDANAL
Sbjct: 109 PNPDPLTGRPEHGGRDRHTCLGIRDVSKLKAILDKAGIPYTLSKSGRPAIFTRDPDANAL 168

Query: 154 EFTQVDG 160
           EFTQVDG
Sbjct: 169 EFTQVDG 175

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358347730|ref|XP_003637907.1| Glyoxalase/bleomycin resistance protein/dioxygenase [Medicago truncatula] gi|355503842|gb|AES85045.1| Glyoxalase/bleomycin resistance protein/dioxygenase [Medicago truncatula]

 Score =  248 bits (633), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 113/125 (90%), Positives = 122/125 (97%)

Query: 35  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP 94
           YGVVSVHHVGILCENLERSL+FYQN+LGL+INEARPHDKLPYRG WLWVG+EMIHLMELP
Sbjct: 4   YGVVSVHHVGILCENLERSLDFYQNVLGLKINEARPHDKLPYRGTWLWVGSEMIHLMELP 63

Query: 95  NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALE 154
           NPDPL+GRP+HGGRDRHTCIAIRDVSKLK ILDKAG+ YTLS+SGRPAIFTRDPDANALE
Sbjct: 64  NPDPLTGRPQHGGRDRHTCIAIRDVSKLKAILDKAGVPYTLSRSGRPAIFTRDPDANALE 123

Query: 155 FTQVD 159
           FTQ+D
Sbjct: 124 FTQID 128

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738629|emb|CBI27874.3| unnamed protein product [Vitis vinifera]

 Score =  244 bits (624), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 117/160 (73%), Positives = 128/160 (80%), Gaps = 14/160 (8%)

Query: 1   MSVEGGILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNI 60
           MSVEG ++ KE I    K               D G+VS+HHVGILCENLERS +FY N+
Sbjct: 54  MSVEGDVMVKEAISTDQK--------------NDIGIVSLHHVGILCENLERSFDFYHNL 99

Query: 61  LGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS 120
           LG  +NEARP+DKLPYRGAWLWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRDVS
Sbjct: 100 LGFPVNEARPNDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRDVS 159

Query: 121 KLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG 160
           KLK ILD+AGI YTLSKSGRPAIFTRDPDANALEF QVD 
Sbjct: 160 KLKEILDEAGIPYTLSKSGRPAIFTRDPDANALEFVQVDA 199

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	160
TAIR|locus:2164600	197	AT5G57040 "AT5G57040" [Arabido	0.781	0.634	0.928	4.8e-62
TAIR|locus:2016254	167	GLYI7 "AT1G80160" [Arabidopsis	0.756	0.724	0.304	1.9e-12
TAIR|locus:2037728	174	GLYI4 "AT1G15380" [Arabidopsis	0.756	0.695	0.304	1e-11
TIGR_CMR|BA_0607	128	BA_0607 "glyoxylase family pro	0.731	0.914	0.344	1.3e-11
TAIR|locus:2057522	184	GLYI8 "AT2G28420" [Arabidopsis	0.725	0.630	0.296	7.6e-09
UNIPROTKB|Q9KL58	127	VC_A0890 "Glyoxylase I family	0.718	0.905	0.296	1.1e-07
TIGR_CMR|VC_A0890	127	VC_A0890 "glyoxylase I family	0.718	0.905	0.296	1.1e-07
UNIPROTKB|E2REA1	189	MCEE "Uncharacterized protein"	0.687	0.582	0.285	2.3e-07
TIGR_CMR|CPS_2825	128	CPS_2825 "glyoxylase family pr	0.731	0.914	0.284	3.8e-07
UNIPROTKB|Q96PE7	176	MCEE "Methylmalonyl-CoA epimer	0.687	0.625	0.293	1.9e-06

TAIR|locus:2164600 AT5G57040 "AT5G57040" [Arabidopsis thaliana (taxid:3702)]

 Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
 Identities = 116/125 (92%), Positives = 121/125 (96%)

Query:    34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 93
             DYGVV VHHVG+LCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG+EMIHLMEL
Sbjct:    73 DYGVVGVHHVGLLCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGSEMIHLMEL 132

Query:    94 PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL 153
             PNPDPL+GRPEHGGRDRH CIAIRDVS LK ILDKAGI+YT+SKSGRPAIFTRDPDANAL
Sbjct:   133 PNPDPLTGRPEHGGRDRHACIAIRDVSNLKEILDKAGIAYTMSKSGRPAIFTRDPDANAL 192

Query:   154 EFTQV 158
             EFTQV
Sbjct:   193 EFTQV 197

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2016254 GLYI7 "AT1G80160" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 39/128 (30%), Positives = 64/128 (50%)

Query:    37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 96
             + S++H+ +LC ++E S+ FYQN+LG  +   RP D   + GAWL+     IHL++ P P
Sbjct:    11 IKSLNHISLLCRSVEESISFYQNVLGF-LPIRRP-DSFDFDGAWLFGHGIGIHLLQSPEP 68

Query:    97 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT---LSKSGRPA--IFTRDPDAN 151
             + L  + E   +D H       +  ++  L +  I Y    + + G     +F  DPDA 
Sbjct:    69 EKLLKKTEINPKDNHISFQCESMEAVEKKLKEMEIEYVRAVVEEGGIQVDQLFFHDPDAF 128

Query:   152 ALEFTQVD 159
              +E    D
Sbjct:   129 MIEICNCD 136

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009414 "response to water deprivation" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2037728 GLYI4 "AT1G15380" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 39/128 (30%), Positives = 63/128 (49%)

Query:    37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 96
             + S++HV +LC +++ S+ FYQ +LG  I   RP + L + GAWL+     IHL+  P P
Sbjct:    11 LTSLNHVSVLCRSVDESMNFYQKVLGF-IPIRRP-ESLNFEGAWLFGHGIGIHLLCAPEP 68

Query:    97 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT--LSKSGR---PAIFTRDPDAN 151
             + L  +     +D H       +  ++  L++ GI Y   L + G      +F  DPD  
Sbjct:    69 EKLPKKTAINPKDNHISFQCESMGVVEKKLEEMGIDYVRALVEEGGIQVDQLFFHDPDGF 128

Query:   152 ALEFTQVD 159
              +E    D
Sbjct:   129 MIEICNCD 136

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TIGR_CMR|BA_0607 BA_0607 "glyoxylase family protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 43/125 (34%), Positives = 61/125 (48%)

Query:    40 VHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAE-MIHLMELPNPD 97
             VHHV I+C N E S +FY  ILG + INE    ++  Y+   L VG E  I L   PNP 
Sbjct:     6 VHHVAIICSNYEVSKDFYTRILGFKAINEVYRKERDSYK-LDLCVGKEYQIELFSFPNPP 64

Query:    98 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANAL 153
                  PE  G  RH   A+ ++ +    L + G+     +    +G+  +F +DPD   L
Sbjct:    65 KRPSFPEAAGL-RHLAFAVTNIEEAVQDLSQCGVETEAIRIDEITGKKFVFFQDPDGLPL 123

Query:   154 EFTQV 158
             E  +V
Sbjct:   124 ELYEV 128

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

TAIR|locus:2057522 GLYI8 "AT2G28420" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 37/125 (29%), Positives = 61/125 (48%)

Query:    37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 96
             +++++HV  LC+++++SLEFY  +LG  +   RP     + GAWL+     IHL++  + 
Sbjct:    18 LMALNHVSRLCKDVKKSLEFYTKVLGF-VEIERPAS-FDFDGAWLFNYGVGIHLVQAKDQ 75

Query:    97 DPLSGRPEH-GGRDRHTCIAIRDVSKLKMILDKAGISY---TLSKSGRPAI---FTRDPD 149
             D L    +H    D H      D+  L+  L +  + Y   T+      AI   F  DPD
Sbjct:    76 DKLPSDTDHLDPMDNHISFQCEDMEALEKRLKEVKVKYIKRTVGDEKDAAIDQLFFNDPD 135

Query:   150 ANALE 154
                +E
Sbjct:   136 GFMVE 140

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009845 "seed germination" evidence=RCA

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

UNIPROTKB|Q9KL58 VC_A0890 "Glyoxylase I family protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 37/125 (29%), Positives = 52/125 (41%)

Query:    40 VHHVGILCENLERSLEFYQNILGLEI---NEARPHDKLPYRGAWLWVGAEMIHLMELPNP 96
             +HH  I+C +  RS  FY  ILGL +   N     D   Y+          I L   P  
Sbjct:     5 IHHAAIICSDYPRSKAFYTEILGLRVLAENYRAARDS--YKLDLALPDGSQIELFSFPKA 62

Query:    97 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANA 152
                   PE  G  RH    + DV+++K  L++ G+S    +    +G+   F  DPD   
Sbjct:    63 PERPSFPEAQGL-RHLAFVVDDVAEIKAQLEQQGVSVEPIRIDEYTGKAYTFFADPDGLP 121

Query:   153 LEFTQ 157
             LE  Q
Sbjct:   122 LELYQ 126

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|VC_A0890 VC_A0890 "glyoxylase I family protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 37/125 (29%), Positives = 52/125 (41%)

Query:    40 VHHVGILCENLERSLEFYQNILGLEI---NEARPHDKLPYRGAWLWVGAEMIHLMELPNP 96
             +HH  I+C +  RS  FY  ILGL +   N     D   Y+          I L   P  
Sbjct:     5 IHHAAIICSDYPRSKAFYTEILGLRVLAENYRAARDS--YKLDLALPDGSQIELFSFPKA 62

Query:    97 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANA 152
                   PE  G  RH    + DV+++K  L++ G+S    +    +G+   F  DPD   
Sbjct:    63 PERPSFPEAQGL-RHLAFVVDDVAEIKAQLEQQGVSVEPIRIDEYTGKAYTFFADPDGLP 121

Query:   153 LEFTQ 157
             LE  Q
Sbjct:   122 LELYQ 126

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E2REA1 MCEE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 36/126 (28%), Positives = 62/126 (49%)

Query:    40 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGA---WLWVGAEMIHLME-LPN 95
             ++H+ +   +LE++  FY+NILG +I+E  P   LP  G    ++ +G   + L+  L N
Sbjct:    61 LNHIAVAVPDLEKAKAFYKNILGAQISEVVP---LPEHGVSVVFVNLGNTKMELLHPLGN 117

Query:    96 PDPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS------GRPAIFTRD 147
               P++G  +    G   H CI + D++   M L +  I  +LS+       G+P IF   
Sbjct:   118 DSPIAGFLQKNKAGGMHHICIEVDDINAAVMDLKEKNIR-SLSEETKIGAHGKPVIFLHP 176

Query:   148 PDANAL 153
              D   +
Sbjct:   177 KDCGGI 182

GO:0046491 "L-methylmalonyl-CoA metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0004493 "methylmalonyl-CoA epimerase activity" evidence=IEA

TIGR_CMR|CPS_2825 CPS_2825 "glyoxylase family protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 35/123 (28%), Positives = 53/123 (43%)

Query:    40 VHHVGILCENLERSLEFYQNILGLEI-NEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 98
             +HHV I+C + E+S +FY  ILG +I  E    D+  ++          I L   P+   
Sbjct:     5 IHHVAIICSDYEKSKDFYTRILGFKIIAENYRADRDSFKLDLALADGTQIELFSFPDAPK 64

Query:    99 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGI---SYTLSK-SGRPAIFTRDPDANALE 154
                 PE  G  RH    + +V  +   L   G+   S  + + +G+   F  DPD   LE
Sbjct:    65 RPSFPEAQGL-RHLAFNVENVEAVSQYLTNLGVDVESIRVDEYTGKQFTFFSDPDGLPLE 123

Query:   155 FTQ 157
               Q
Sbjct:   124 LYQ 126

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

UNIPROTKB|Q96PE7 MCEE "Methylmalonyl-CoA epimerase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 114 (45.2 bits), Expect = 1.9e-06, P = 1.9e-06
 Identities = 37/126 (29%), Positives = 62/126 (49%)

Query:    40 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGA---WLWVGAEMIHLME-LPN 95
             ++HV I   +LE++  FY+NILG +++EA P   LP  G    ++ +G   + L+  L  
Sbjct:    48 LNHVAIAVPDLEKAAAFYKNILGAQVSEAVP---LPEHGVSVVFVNLGNTKMELLHPLGR 104

Query:    96 PDPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS------GRPAIFTRD 147
               P++G  +    G   H CI + +++   M L K  I  +LS+       G+P IF   
Sbjct:   105 DSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIR-SLSEEVKIGAHGKPVIFLHP 163

Query:   148 PDANAL 153
              D   +
Sbjct:   164 KDCGGV 169

GO:0046491 "L-methylmalonyl-CoA metabolic process" evidence=IDA

GO:0004493 "methylmalonyl-CoA epimerase activity" evidence=IDA

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0006635 "fatty acid beta-oxidation" evidence=TAS

GO:0019626 "short-chain fatty acid catabolic process" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.13.11.39	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT5G57040	lactoylglutathione lyase family protein / glyoxalase I family protein; lactoylglutathione lyase family protein / glyoxalase I family protein; FUNCTIONS IN- catalytic activity; INVOLVED IN- metabolic process; LOCATED IN- chloroplast; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro-IPR004360); BEST Arabidopsis thaliana protein match is- lactoylglutathione lyase family protein / glyoxalase I family protein (TAIR-AT1G80160.1); Has 744 Blast hits to 744 proteins in 277 species- A [...] (197 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT2G45870	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (410 aa)							•		0.883
	AT1G65230	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (286 aa)				•			•		0.832
	AT2G12280	ligase, putative; ligase, putative; FUNCTIONS IN- formate-tetrahydrofolate ligase activity, lig [...] (90 aa)							•		0.825
	AT2G12200	ligase, putative; ligase, putative; FUNCTIONS IN- formate-tetrahydrofolate ligase activity, lig [...] (63 aa)							•		0.825
	AT2G42750	DNAJ heat shock N-terminal domain-containing protein; DNAJ heat shock N-terminal domain-contain [...] (344 aa)				•			•		0.785
	AT5G03880	electron carrier; electron carrier; FUNCTIONS IN- electron carrier activity; INVOLVED IN- cell [...] (339 aa)				•					0.698
	AT5G37360	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (309 aa)				•					0.690
	MSRB1	MSRB1 (methionine sulfoxide reductase B 1); peptide-methionine-(S)-S-oxide reductase; methionin [...] (202 aa)				•					0.681
	AT1G52870	peroxisomal membrane protein-related; peroxisomal membrane protein-related; FUNCTIONS IN- molec [...] (366 aa)				•					0.677
	AT5G57345	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (188 aa)				•					0.667

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	160
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	1e-34
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	2e-12
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	1e-11
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	2e-11
cd08352	125	cd08352, Glo_EDI_BRP_like_1, This conserved domain	3e-11
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	1e-10
PRK11478	129	PRK11478, PRK11478, putative lyase; Provisional	3e-08
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	6e-08
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	1e-07
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	4e-06
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	2e-05
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	2e-05
TIGR03081	128	TIGR03081, metmalonyl_epim, methylmalonyl-CoA epim	5e-05
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	6e-04
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	0.002
cd08357	125	cd08357, Glo_EDI_BRP_like_18, This conserved domai	0.003
cd07242	128	cd07242, Glo_EDI_BRP_like_6, This conserved domain	0.004
cd07244	121	cd07244, FosA, FosA, a Fosfomycin resistance prote	0.004

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score =  116 bits (294), Expect = 1e-34
 Identities = 44/120 (36%), Positives = 59/120 (49%), Gaps = 10/120 (8%)

Query: 40  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDP 98
           + HV +   +LE S  FY ++LGLE     P     + GAWL+ G    +HL+E   PD 
Sbjct: 1   LDHVALRVPDLEASRAFYTDVLGLEEGPRPPF---LFPGAWLYAGDGPQLHLIEEDPPDA 57

Query: 99  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEF 155
           L   PE  GRD H    + D+   +  L  AG+ YT S     G   +F RDPD N +E 
Sbjct: 58  L---PEGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 60.1 bits (146), Expect = 2e-12
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 5/120 (4%)

Query: 40  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 99
           + HV +   +LE+SL+FY ++LG ++ E     + P R A+   G  ++ L+    P P 
Sbjct: 2   IDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGGRVLELLLNETPPPA 61

Query: 100 SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEF 155
           +              ++ DV      L  AG+           G    + RDPD N +E 
Sbjct: 62  AAGFGGHHI-AFIAFSVDDVDAAYDRLKAAGVEIVREPGRHGWGGRYSYFRDPDGNLIEL 120

Length = 120

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 57.8 bits (140), Expect = 1e-11
 Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 12/118 (10%)

Query: 42  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 101
           HVG+   +LE ++ FY+++LG E+      D      A+L +G   + L E   P     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEV---LERDGGGAEFAFLRLGGTRLELFEGDEP----- 52

Query: 102 RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEF 155
            P  GG   H    + DV      L  AG+         P      + RDPD N +E 
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGGRVAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 57.3 bits (139), Expect = 2e-11
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 13/116 (11%)

Query: 48  ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGR-PEH 105
           ++LE +  FY+++LGLE        K   R A+ WVG   M+ L +        G  P H
Sbjct: 9   DDLEAAEAFYEDVLGLE-----LMLKEDRRLAFFWVGGRGMLLLFDPGATSTPGGEIPPH 63

Query: 106 GGRDR-HTCIAIR--DVSKLKMILDKAGI---SYTLSKSGRPAIFTRDPDANALEF 155
           GG    H   AI   ++++ +  L+  G+   S      G  +++ RDPD N LE 
Sbjct: 64  GGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLEL 119

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|211358 cd08352, Glo_EDI_BRP_like_1, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 57.3 bits (139), Expect = 3e-11
 Identities = 39/128 (30%), Positives = 53/128 (41%), Gaps = 14/128 (10%)

Query: 39  SVHHVGILCENLERSLEFYQNILGLEI-NEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 97
            +HHV I+C +  RS EFY  +LGL +  E    ++  Y+      G   I L   PNP 
Sbjct: 3   GIHHVAIICSDYARSKEFYVEVLGLTLIRETYRPERKSYKLDLALNGEYQIELFSFPNPP 62

Query: 98  PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIS--------YTLSKSGRPAIFTRDPD 149
           P    PE  G  RH   A+ D+      L   G+         +T    G+   F  DPD
Sbjct: 63  PRPSYPEACGL-RHLAFAVEDIEAAVAELKAHGVEVEPIRVDEFT----GKRFTFFYDPD 117

Query: 150 ANALEFTQ 157
              LE  +
Sbjct: 118 GLPLELYE 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 55.5 bits (133), Expect = 1e-10
 Identities = 31/136 (22%), Positives = 48/136 (35%), Gaps = 18/136 (13%)

Query: 40  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL------ 93
           +HHV +   +LE S++FY ++LGL + +   ++     G  L          EL      
Sbjct: 3   IHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGF 62

Query: 94  -------PNPDPLSGRPEHGGRDRHTCIAIRD---VSKLKMILDKAGISYTLSKSGRPA- 142
                     D   G P       H    + D          LD  G+   L + GR   
Sbjct: 63  EGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGV 122

Query: 143 -IFTRDPDANALEFTQ 157
            ++ RDPD   +E   
Sbjct: 123 HVYFRDPDGILIELAT 138

Length = 138

>gnl|CDD|183156 PRK11478, PRK11478, putative lyase; Provisional

 Score = 49.1 bits (117), Expect = 3e-08
 Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 6/127 (4%)

Query: 36  GVVSVHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAEMIHLMELP 94
           G+  VHH+ I+  +   S  FY +ILG    +E     +  ++G     G  +I L   P
Sbjct: 3   GLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFP 62

Query: 95  NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDA 150
            P     RPE  G  RH   ++ D+      L+   +     +    + +   F  DPD 
Sbjct: 63  FPPERPSRPEACGL-RHLAFSVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPDG 121

Query: 151 NALEFTQ 157
             LE  +
Sbjct: 122 LPLELYE 128

Length = 129

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 47.8 bits (114), Expect = 6e-08
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 11/115 (9%)

Query: 45  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 104
           +   +LE +  FY+ +LG E+ E    +   +R   +      I L+ LP PD       
Sbjct: 1   LPVSDLEAARAFYEELLGFEVEE-EDGEYAEFRLGLVLALGGFIELIGLPEPDA------ 53

Query: 105 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEF 155
            GG   H    + D+  L   L  AG +        P      + RDPD N +E 
Sbjct: 54  PGGGGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPWGGREFYVRDPDGNLIEL 108

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 12/127 (9%)

Query: 40  VHHVGILCENLERSLEFYQNILGLE-----INEARPHDKLPYRGAWLWVGAEMIHLMELP 94
           +HHV ++  + + +++FY ++LGL      +N+  P     + G  L     ++   E P
Sbjct: 2   LHHVTLVTRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWP 61

Query: 95  NPDPLSGRPEHGGRDRHTCIAIRDVSKL---KMILDKAGISYT--LSKSGRPAIFTRDPD 149
           +  P  GR   G    H   ++   + L   +  L  AG+  +  + + G  +++  DPD
Sbjct: 62  DAGP-KGRRGPGQI-HHIAFSVPSEASLEAWRERLRAAGVPVSGVVDRFGERSLYFEDPD 119

Query: 150 ANALEFT 156
              LE T
Sbjct: 120 GIRLELT 126

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 43.3 bits (103), Expect = 4e-06
 Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 15/128 (11%)

Query: 37  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 96
           +  + HV +   ++E +L+FY  +LG+E+               L  G++ I+L  +   
Sbjct: 1   IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEVGRKA----LRFGSQKINLHPVGGE 56

Query: 97  -DPLSGRPEHGGRDRHTCIAI-RDVSKLKMILDKAGISYTLSKSGR-------PAIFTRD 147
            +P +G P  G      C+     + +L   L+  G+        R        +++ RD
Sbjct: 57  FEPAAGSPGPGS--DDLCLITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRD 114

Query: 148 PDANALEF 155
           PD N +E 
Sbjct: 115 PDGNLIEL 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 10/115 (8%)

Query: 42  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIH-LMELP-NPDPL 99
           H  +  ++LE+SL+FY ++LG+++   +   +  +   +L    E    ++EL  N    
Sbjct: 3   HTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG-- 60

Query: 100 SGRPEHGGRD-RHTCIAIRDVSKLKMILDKAGISYT----LSKSGRPAIFTRDPD 149
           +  P   G    H   A+ DV      L++ G+  T           A F +DPD
Sbjct: 61  TEEPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPGDGGMKGIA-FIKDPD 114

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 1/107 (0%)

Query: 41  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 100
           HH+GI+  +L+ +  F+ ++LGL        +      A+  +G      +EL  P    
Sbjct: 1   HHIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLGDGPAVEVELIQPLDGE 60

Query: 101 GRPE-HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTR 146
              +  G    H    + D+      L+  G+          A   R
Sbjct: 61  SFLDKGGPGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRAGAAGRR 107

Length = 110

>gnl|CDD|213772 TIGR03081, metmalonyl_epim, methylmalonyl-CoA epimerase

 Score = 40.4 bits (95), Expect = 5e-05
 Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 2/94 (2%)

Query: 40  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-P 98
           + HVGI   +LE + +FY+++LG +++E     +   +  ++ +G   + L+E    D P
Sbjct: 2   IDHVGIAVPDLEEAAKFYEDVLGAQVSEIEELPEQGVKVVFIALGNTKVELLEPLGEDSP 61

Query: 99  LSGRPE-HGGRDRHTCIAIRDVSKLKMILDKAGI 131
           ++   E +GG   H  I + D+      L + G+
Sbjct: 62  IAKFLEKNGGGIHHIAIEVDDIEAALETLKEKGV 95

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer. Length = 128

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 37.5 bits (88), Expect = 6e-04
 Identities = 34/121 (28%), Positives = 47/121 (38%), Gaps = 28/121 (23%)

Query: 49  NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG-- 106
           +LERSL FYQ++LGLE+ E           A L  G     L+ L   DP +     G  
Sbjct: 12  DLERSLAFYQDVLGLEVLERTDS------TAVLGTG-GKRPLLVL-EEDPDAPPAPPGTT 63

Query: 107 GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----------AIFTRDPDANALEF 155
           G   H  I +   + L   L        L + G P           A++  DP+ N +E 
Sbjct: 64  GLY-HFAILLPSRADLARAL------RRLIELGIPLEGASDHLVSEALYLSDPEGNGIEI 116

Query: 156 T 156
            
Sbjct: 117 Y 117

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 36.0 bits (84), Expect = 0.002
 Identities = 10/25 (40%), Positives = 19/25 (76%)

Query: 40 VHHVGILCENLERSLEFYQNILGLE 64
          + H+GI   +LE +L+FY+++LG+ 
Sbjct: 1  IDHIGIAVPDLEAALKFYRDVLGVG 25

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|176705 cd08357, Glo_EDI_BRP_like_18, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 35.3 bits (82), Expect = 0.003
 Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 31/134 (23%)

Query: 41  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-----GAEMI-HLMELP 94
            H+ I   +LE +  FY ++LG    E R  +         WV     G +++ HL   P
Sbjct: 1   FHLAIPVRDLEAARAFYGDVLGC--KEGRSSET--------WVDFDFFGHQLVAHLS--P 48

Query: 95  NPDPLSGRPEHGGRD---RHTCIAIR--DVSKLKMILDKAGISYTLSKS----GRP---- 141
           N +  +      G      H  + +   +   L   L+ AG+ + +       G+P    
Sbjct: 49  NFNADASDNAVDGHPVPVPHFGLILSEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQE 108

Query: 142 AIFTRDPDANALEF 155
             F +DP  NALEF
Sbjct: 109 TFFLKDPSGNALEF 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176666 cd07242, Glo_EDI_BRP_like_6, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 35.3 bits (82), Expect = 0.004
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 39 SVHHVGILCENLERSLEFYQNILGL 63
           +HHV +   +LERS  FY  +LGL
Sbjct: 1  GIHHVELTVRDLERSRAFYDWLLGL 25

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 128

>gnl|CDD|176668 cd07244, FosA, FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

 Score = 35.1 bits (81), Expect = 0.004
 Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 16/119 (13%)

Query: 39  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 98
            ++H+ +   +LERS+ FY ++LG      + H +   +GA+L  G   + L    N  P
Sbjct: 1   GINHITLAVSDLERSVAFYVDLLGF-----KLHVRWD-KGAYLEAGDLWLCLSVDANVGP 54

Query: 99  LSGRPEHGGRDRHTCIAIR--DVSKLKMILDKAGI-SYTLSKSGRPAIFTRDPDANALE 154
                       H   ++   D + LK  L +AG+  +  + S   + +  DPD + LE
Sbjct: 55  AK-------DYTHYAFSVSEEDFASLKEKLRQAGVKEWKENTSEGDSFYFLDPDGHKLE 106

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 121

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	160
PRK11478	129	putative lyase; Provisional	99.9
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.89
PLN02367	233	lactoylglutathione lyase	99.89
PLN03042	185	Lactoylglutathione lyase; Provisional	99.88
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.88
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.88
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.87
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.87
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.87
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.87
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.86
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.86
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.86
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.86
PLN02300	286	lactoylglutathione lyase	99.86
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.86
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.85
PRK10291	129	glyoxalase I; Provisional	99.85
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.85
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.84
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.84
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.84
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.84
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.84
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.84
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.83
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.83
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.83
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.83
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.83
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.83
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.82
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.82
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.82
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.82
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.82
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.82
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.82
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.81
PRK06724	128	hypothetical protein; Provisional	99.81
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.81
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.81
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.81
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.81
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.81
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.81
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.81
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.8
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.8
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.8
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.79
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.79
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.79
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.78
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.78
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.78
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.78
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.78
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.77
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.77
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.77
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.77
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.76
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.76
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.76
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.75
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.75
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.75
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.74
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.73
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.73
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.72
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.71
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.69
PLN02300	286	lactoylglutathione lyase	99.69
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.68
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.68
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.66
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.64
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.57
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.53
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.49
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.45
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.43
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.36
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.31
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.28
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	99.26
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.25
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	99.15
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	99.13
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	99.04
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.01
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.86
PRK10148	147	hypothetical protein; Provisional	98.78
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.73
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.69
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.64
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.56
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.41
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	97.72
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	97.71
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	97.43
PF15067	236	FAM124: FAM124 family	97.22
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	96.92
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	96.56
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	96.18
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	95.57
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	94.65
PLN02367	233	lactoylglutathione lyase	94.58
PF13670	83	PepSY_2: Peptidase propeptide and YPEB domain This	94.08
PRK11478	129	putative lyase; Provisional	94.05
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	93.94
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	93.66
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	93.46
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	93.12
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	92.52
PLN03042	185	Lactoylglutathione lyase; Provisional	92.26
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	92.16
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	92.11
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	92.04
COG3865	151	Uncharacterized protein conserved in bacteria [Fun	91.98
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	91.97
PRK10291	129	glyoxalase I; Provisional	91.63
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	91.52
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	91.05
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	90.54
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	89.94
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	89.78
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	89.41
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	89.04
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	88.96
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	88.08
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	87.95
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	87.61
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	87.31
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	86.74
PF06185	185	YecM: YecM protein; InterPro: IPR010393 This famil	86.47
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	86.43
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	86.42
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	86.21
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	85.48
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	83.89
PRK04101	139	fosfomycin resistance protein FosB; Provisional	82.58
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	82.52
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	82.28
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	81.6
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	81.58
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	80.58
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	80.27

>PRK11478 putative lyase; Provisional

Probab=99.90  E-value=1e-21  Score=129.16  Aligned_cols=122  Identities=24%  Similarity=0.380  Sum_probs=87.5

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCCCCCCCCCCCCCCCceEEE
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTC  113 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~  113 (160)
                      +++.+++||+|.|+|++++++||+++|||++......+........+.. ++..++++....+......+ ...+..|+|
T Consensus         2 ~~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~-~~~g~~hi~   80 (129)
T PRK11478          2 LGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFPFPPERPSRP-EACGLRHLA   80 (129)
T ss_pred             CCcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceeeEecCCCcEEEEEEecCCCCCCCCC-CCCceeEEE
Confidence            4677899999999999999999999999998643221111111112333 45577777654332211111 223468999


Q ss_pred             EEeCCHHHHHHHHHHCCCeEecc----CCCceEEEEEcCCCCeEEEEe
Q 031406          114 IAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       114 f~v~d~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~ie~~~  157 (160)
                      |.|+|+++++++|+++|+++...    ..+.+.+||+|||||.||++|
T Consensus        81 f~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         81 FSVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             EEeCCHHHHHHHHHHcCCeeeccccCCCCCCEEEEEECCCCCEEEEEe
Confidence            99999999999999999998643    246688999999999999987

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.89  E-value=8.2e-22  Score=131.84  Aligned_cols=121  Identities=21%  Similarity=0.338  Sum_probs=89.7

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCC-----------CCcceEEEEe--CCcEEEEEecCCCCCCC---
Q 031406           37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----------LPYRGAWLWV--GAEMIHLMELPNPDPLS---  100 (160)
Q Consensus        37 ~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~-----------~~~~~~~~~~--g~~~~~l~~~~~~~~~~---  100 (160)
                      +.+++||+|.|+|+++|++||++ |||++......+.           ......++..  ++..++|+....+....   
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~~~~~~~~~   79 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHHPAVIADHR   79 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecCCCCcCcCC
Confidence            35899999999999999999998 9998765432111           1122344443  45688998865433221   


Q ss_pred             CCCCCCCCceEEEEEeCCHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEee
Q 031406          101 GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       101 ~~~~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      .....+.++.|+||.|+|+++++++|+++|+++..++    .+.+.+|++||||+.|||+|.
T Consensus        80 ~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          80 PAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeEEEEEECCCCCEEEeeec
Confidence            1123345678999999999999999999999987643    456889999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PLN02367 lactoylglutathione lyase

Probab=99.89  E-value=1.7e-21  Score=138.32  Aligned_cols=126  Identities=15%  Similarity=0.181  Sum_probs=95.9

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeC-------------------CcEEEEEecC
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-------------------AEMIHLMELP   94 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g-------------------~~~~~l~~~~   94 (160)
                      ...--.+.|++|+|+|++++++||+++|||++......+..+++.+|+..+                   +..++|....
T Consensus        70 ~t~~~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~  149 (233)
T PLN02367         70 ATKGYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNW  149 (233)
T ss_pred             CCCCcEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCC
Confidence            334457999999999999999999999999988876666666777777531                   2477887655


Q ss_pred             CCCC--CCCCCC--C--CCCceEEEEEeCCHHHHHHHHHHCCCeEeccCC---CceEEEEEcCCCCeEEEEeeC
Q 031406           95 NPDP--LSGRPE--H--GGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus        95 ~~~~--~~~~~~--~--~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~~---g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      +...  ......  .  ..++.||||.|+|+++++++|+++|+++...+.   ..+.++++|||||.|||+|..
T Consensus       150 g~e~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~~riaFIkDPDGn~IEL~e~~  223 (233)
T PLN02367        150 GTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKMKGIAFIKDPDGYWIEIFDLK  223 (233)
T ss_pred             CCCccccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCceEEEEEECCCCCEEEEEecc
Confidence            4331  111111  1  146799999999999999999999999986542   245789999999999999975

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.88  E-value=4.4e-21  Score=133.24  Aligned_cols=124  Identities=17%  Similarity=0.216  Sum_probs=92.2

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-------------------CCcEEEEEecCCC
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-------------------GAEMIHLMELPNP   96 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-------------------g~~~~~l~~~~~~   96 (160)
                      .--++.|++|+|.|+++|++||+++|||++..+...+...++.+++..                   ++..++|+.....
T Consensus        24 ~~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~  103 (185)
T PLN03042         24 KGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGT  103 (185)
T ss_pred             CCcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCC
Confidence            345799999999999999999999999998876554454455566542                   2347888765432


Q ss_pred             CCCC------CCCCCCCCceEEEEEeCCHHHHHHHHHHCCCeEeccCC---CceEEEEEcCCCCeEEEEeeC
Q 031406           97 DPLS------GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus        97 ~~~~------~~~~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~~---g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      ...+      .....+.++.|+||.|+|+++++++|+++|+.+...+.   +.+.++++|||||.|||++..
T Consensus       104 ~~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~~~~~fi~DPdG~~IEl~e~~  175 (185)
T PLN03042        104 ESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLK  175 (185)
T ss_pred             cccccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCceeEEEEECCCCCEEEEEECC
Confidence            2100      01112246799999999999999999999999875432   345678899999999999864

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.88  E-value=8e-21  Score=123.70  Aligned_cols=119  Identities=27%  Similarity=0.453  Sum_probs=86.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCCCCCCCCCCCCCCCceEEEEEe
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  116 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  116 (160)
                      .+++||+|.|.|++++++||+++|||+.......+........+.. ++..+++............+ .+.+..|++|.|
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~-~~~g~~h~~~~v   80 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFSFPNPPERPSYP-EACGLRHLAFSV   80 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEEcCCCCCCCCCC-cCCCceEEEEEe
Confidence            4789999999999999999999999998754322221111223333 55677777654432211112 234578999999


Q ss_pred             CCHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEe
Q 031406          117 RDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       117 ~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~  157 (160)
                      +|+++++++|+++|+++...+    .+.+.+|++||+||.|||+|
T Consensus        81 ~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          81 EDIEAAVKHLKAKGVEVEPIRVDEFTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             CCHHHHHHHHHHcCCccccccccCCCceEEEEEECCCCCEEEecC
Confidence            999999999999999986532    35678999999999999976

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.88  E-value=7.5e-21  Score=130.13  Aligned_cols=122  Identities=22%  Similarity=0.263  Sum_probs=89.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeec----CC--------------CCCCcceEEEEeC-CcEEEEEecCCCCC
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEAR----PH--------------DKLPYRGAWLWVG-AEMIHLMELPNPDP   98 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~----~~--------------~~~~~~~~~~~~g-~~~~~l~~~~~~~~   98 (160)
                      ++++||.|.|+|+++|++||+++|||++....    ..              .......+++..+ +..++|++......
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~~~~   82 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKNQEN   82 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccCCCC
Confidence            57899999999999999999999999875311    10              0111334556554 45799998875433


Q ss_pred             CCCCC-CCCCCceEEEEEeCCHHHHHHHHHHCCCeEeccC-----C---CceEEEEEcCCCCeEEEEeeC
Q 031406           99 LSGRP-EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK-----S---GRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus        99 ~~~~~-~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~-----~---g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      +.... ..+.+..|+||.|+|+++++++|+++|+++....     .   +.+.+|++|||||.|||++.+
T Consensus        83 ~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  152 (162)
T TIGR03645        83 PEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHS  152 (162)
T ss_pred             CCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcC
Confidence            22211 2245679999999999999999999998764321     1   237899999999999999864

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.87  E-value=4.2e-21  Score=127.73  Aligned_cols=118  Identities=12%  Similarity=0.043  Sum_probs=87.9

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCC--CCCCCCCceEEEEEeC
Q 031406           40 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAIR  117 (160)
Q Consensus        40 i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~--~~~~~~~~~hi~f~v~  117 (160)
                      ++|+.|.|+|++++++||+++|||++......+.  ....++..++..+.+...........  ....+.+..|++|.|+
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~~--~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia~~V~   78 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSED--KASYLLRQGDINFVLNSPLNSFAPVADFLEKHGDGVCDVAFRVD   78 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCCc--eEEEEEEcCCEEEEEecCCCCCCchHHHHHhcCCceEEEEEEeC
Confidence            5899999999999999999999999876543221  22344555666677665433221100  0123455789999999


Q ss_pred             CHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEeeC
Q 031406          118 DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       118 d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |+++++++|+++|+++..++    .+.+.++++||||++|||+|.+
T Consensus        79 Dvda~~~~l~~~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~  124 (136)
T cd08342          79 DAAAAYERAVARGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRK  124 (136)
T ss_pred             CHHHHHHHHHHcCCeEccCceecCCeEEEEEEeccCCcEEEEEecC
Confidence            99999999999999997543    4568999999999999999964

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.87  E-value=7.3e-21  Score=124.06  Aligned_cols=117  Identities=23%  Similarity=0.318  Sum_probs=84.6

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeC
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  117 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~  117 (160)
                      +++|+.|.|+|++++++||+++|||+.......+..+...+|+.. ++..+++++........ ......+..|+||.|+
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~g~~hi~f~v~   79 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTRPDIAPSP-NEGERTGWAHLAFSVG   79 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcCcccCCCc-ccCCCCceEEEEEECC
Confidence            478999999999999999999999997543322233334566666 45678888654322111 1122245689999996


Q ss_pred             ---CHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEE
Q 031406          118 ---DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFT  156 (160)
Q Consensus       118 ---d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~  156 (160)
                         |+++++++|+++|+++...+    .+.+.++++|||||.|||.
T Consensus        80 ~~~~v~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          80 SKEAVDELTERLRADGYLIIGEPRTTGDGYYESVILDPEGNRIEIT  125 (125)
T ss_pred             CHHHHHHHHHHHHHCCCEEEeCceecCCCeEEEEEECCCCCEEEeC
Confidence               58999999999999987643    3445678999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.87  E-value=1.2e-20  Score=127.54  Aligned_cols=124  Identities=23%  Similarity=0.307  Sum_probs=87.0

Q ss_pred             CCCceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCc----EEEEEecCCCCCCCCCCCCCC
Q 031406           32 IRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGG  107 (160)
Q Consensus        32 ~~~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~----~~~l~~~~~~~~~~~~~~~~~  107 (160)
                      .+.....+++|+.|.|.|++++++||+++|||++......+......+++..++.    .+.+.......    ....+.
T Consensus        10 ~~~~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~   85 (150)
T TIGR00068        10 DPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTE----KYDLGN   85 (150)
T ss_pred             CcccCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCC----cccCCC
Confidence            3445667999999999999999999999999998764433333233345544321    23322211111    112234


Q ss_pred             CceEEEEEeCCHHHHHHHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEeeC
Q 031406          108 RDRHTCIAIRDVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       108 ~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      +..|++|.|+|+++++++|.++|+++..++     .+.+.+||+|||||+|||++..
T Consensus        86 g~~hi~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  142 (150)
T TIGR00068        86 GFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRK  142 (150)
T ss_pred             ceeEEEEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECC
Confidence            578999999999999999999999886543     2246789999999999999865

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.87  E-value=1.7e-20  Score=124.13  Aligned_cols=115  Identities=17%  Similarity=0.276  Sum_probs=85.6

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCC-cceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~-~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      |+.+++|++|.|+|++++++||+++||++........... ....++..++..+.+.......        .....|++|
T Consensus         1 mi~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~--------~~~~~Hiaf   72 (131)
T cd08364           1 MIEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIGGLWIAIMEGDSLQ--------ERTYNHIAF   72 (131)
T ss_pred             CcccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcCCeEEEEecCCCCC--------CCCceEEEE
Confidence            4668999999999999999999999999876543221111 1123445566677776432211        123689999


Q ss_pred             EeC--CHHHHHHHHHHCCCeEeccC---C-CceEEEEEcCCCCeEEEEee
Q 031406          115 AIR--DVSKLKMILDKAGISYTLSK---S-GRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       115 ~v~--d~~~~~~~l~~~G~~~~~~~---~-g~~~~~~~DPdG~~ie~~~~  158 (160)
                      .|+  ++++++++|+++|+.+..+.   . .++.+||+|||||.|||.+.
T Consensus        73 ~v~~~~ld~~~~~l~~~gv~~~~~~~~~~~~g~~~yf~DPdG~~iEl~~~  122 (131)
T cd08364          73 KISDSDVDEYTERIKALGVEMKPPRPRVQGEGRSIYFYDFDNHLFELHTG  122 (131)
T ss_pred             EcCHHHHHHHHHHHHHCCCEEecCCccccCCceEEEEECCCCCEEEEecC
Confidence            998  79999999999999987542   2 36899999999999999875

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.86  E-value=2e-20  Score=124.90  Aligned_cols=113  Identities=23%  Similarity=0.361  Sum_probs=87.3

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  115 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  115 (160)
                      |+.++.|+.|.|+|++++++||+++|||++....+      ..+++..++..+.+.......    ......+..|++|.
T Consensus         1 ~i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~g~~l~l~~~~~~~----~~~~~~~~~hiaf~   70 (139)
T PRK04101          1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLNGLWIALNEEKDIP----RNEIHQSYTHIAFS   70 (139)
T ss_pred             CCCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecCCeEEEeeccCCCC----CccCCCCeeEEEEE
Confidence            46789999999999999999999999999875422      236677777777665432211    11123446899999


Q ss_pred             eC--CHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEee
Q 031406          116 IR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       116 v~--d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      ++  |+++++++++++|+++...+    .+++.+||+|||||+||+.+.
T Consensus        71 v~~~dv~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~  119 (139)
T PRK04101         71 IEEEDFDHWYQRLKENDVNILPGRERDERDKKSIYFTDPDGHKFEFHTG  119 (139)
T ss_pred             ecHHHHHHHHHHHHHCCceEcCCccccCCCceEEEEECCCCCEEEEEeC
Confidence            98  99999999999999986432    367999999999999999874

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.86  E-value=2.4e-20  Score=121.09  Aligned_cols=114  Identities=21%  Similarity=0.315  Sum_probs=85.2

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC----cEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 031406           40 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIA  115 (160)
Q Consensus        40 i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~----~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  115 (160)
                      +.|++|.|+|++++.+||+++|||++......+......+++..++    ..+++........   ....+.+..|++|.
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~i~~~   77 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEE---PYDNGNGFGHLAFA   77 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCC---CcCCCCCeEEEEEE
Confidence            5799999999999999999999999876544333334456666643    3555554332211   11223456899999


Q ss_pred             eCCHHHHHHHHHHCCCeEeccC---CCceEEEEEcCCCCeEEEE
Q 031406          116 IRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFT  156 (160)
Q Consensus       116 v~d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~ie~~  156 (160)
                      ++|+++++++++++|+++...+   .+.+.+||+|||||+|||+
T Consensus        78 v~did~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          78 VDDVYAACERLEEMGVEVTKPPGDGGMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             eCCHHHHHHHHHHCCCEEeeCCccCCCceEEEEECCCCCEEEeC
Confidence            9999999999999999997654   3567889999999999984

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.86  E-value=8.9e-21  Score=124.29  Aligned_cols=119  Identities=20%  Similarity=0.414  Sum_probs=86.9

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCC--CCCCCCceEEEEEe
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR--PEHGGRDRHTCIAI  116 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~--~~~~~~~~hi~f~v  116 (160)
                      +++|+.|.|+|++++++||+++|||+.......+..+...+++..++..++|............  ...+.+..|+||.|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i~~~v   80 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGNTKVELLEPLGEDSPIAKFLEKNGGGIHHIAIEV   80 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCCEEEEEEecCCCCChHHHHHhcCCCceEEEEEEc
Confidence            4789999999999999999999999987543223334455677777778888764332211100  11234568999999


Q ss_pred             CCHHHHHHHHHHCCCeEecc-C----CCceEEEE--EcCCCCeEEEEe
Q 031406          117 RDVSKLKMILDKAGISYTLS-K----SGRPAIFT--RDPDANALEFTQ  157 (160)
Q Consensus       117 ~d~~~~~~~l~~~G~~~~~~-~----~g~~~~~~--~DPdG~~ie~~~  157 (160)
                      +|+++++++|.++|+++..+ +    .|.+..++  +||||+.||+.|
T Consensus        81 ~di~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        81 DDIEAALETLKEKGVRLIDEEPRIGAGGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCcccCCCCccCCCCCEEEEecccccCcEEEEecC
Confidence            99999999999999998653 2    23344566  699999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.86  E-value=4.3e-20  Score=120.21  Aligned_cols=117  Identities=21%  Similarity=0.373  Sum_probs=87.5

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEe
Q 031406           37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  116 (160)
Q Consensus        37 ~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  116 (160)
                      +.+++|+.|.|+|++++++||+++|||+........    ...++..++..+++......... .....+.+..|++|.+
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~hi~~~~   75 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV----GRKALRFGSQKINLHPVGGEFEP-AAGSPGPGSDDLCLIT   75 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeecccccC----CceEEEeCCEEEEEecCCCccCc-CccCCCCCCceEEEEe
Confidence            357899999999999999999999999987643321    23556667777777665432211 1112234568999999


Q ss_pred             CC-HHHHHHHHHHCCCeEeccC-------CCceEEEEEcCCCCeEEEEee
Q 031406          117 RD-VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       117 ~d-~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      ++ +++++++++++|+++...+       ++++.+||+|||||+||+.++
T Consensus        76 ~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  125 (125)
T cd07253          76 EPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSNY  125 (125)
T ss_pred             cccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeeeC
Confidence            74 9999999999999886432       235789999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PLN02300 lactoylglutathione lyase

Probab=99.86  E-value=2.3e-20  Score=138.54  Aligned_cols=123  Identities=24%  Similarity=0.322  Sum_probs=90.2

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC--c--EEEEEecCCCCCCCCCCCCCCC
Q 031406           33 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--E--MIHLMELPNPDPLSGRPEHGGR  108 (160)
Q Consensus        33 ~~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~--~--~~~l~~~~~~~~~~~~~~~~~~  108 (160)
                      +.+.+.++.|++|.|+|++++++||+++|||+.......+...+...|+..++  .  .+++.......    ....+.+
T Consensus        18 ~~~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~----~~~~~~g   93 (286)
T PLN02300         18 PKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGVD----KYDIGTG   93 (286)
T ss_pred             CccccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCCC----ccccCCC
Confidence            44678999999999999999999999999999876443333334456666542  2  23333221111    1123455


Q ss_pred             ceEEEEEeCCHHHHHHHHHHCCCeEeccC----C-CceEEEEEcCCCCeEEEEeeC
Q 031406          109 DRHTCIAIRDVSKLKMILDKAGISYTLSK----S-GRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       109 ~~hi~f~v~d~~~~~~~l~~~G~~~~~~~----~-g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      ..|++|.|+|+++++++++++|+++...+    . +.+.+||+|||||.|||++++
T Consensus        94 ~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  149 (286)
T PLN02300         94 FGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRG  149 (286)
T ss_pred             ccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCC
Confidence            78999999999999999999999987543    2 246789999999999999865

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.86  E-value=2.4e-20  Score=119.15  Aligned_cols=110  Identities=40%  Similarity=0.745  Sum_probs=85.7

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCc-EEEEEecCCCCCCCCCCCCCCCceEEEEEeCC
Q 031406           40 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  118 (160)
Q Consensus        40 i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~-~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d  118 (160)
                      |+|++|.|+|++++++||+++|||+........   ....|+..++. .+++.........   +..+++..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~i~l~~~~~~~~~---~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL---FPGAWLYAGDGPQLHLIEEDPPDAL---PEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC---CCceEEEeCCCcEEEEEecCCCccc---cCCCcccceEEEEeCC
Confidence            589999999999999999999999976543221   23467777655 7787766544321   2223456899999999


Q ss_pred             HHHHHHHHHHCCCeEeccC---CCceEEEEEcCCCCeEEE
Q 031406          119 VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEF  155 (160)
Q Consensus       119 ~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~ie~  155 (160)
                      +++++++++++|+++..++   .+.+.+++.||+||+|||
T Consensus        75 ~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHHcCCCcccccCCCCCccEEEEECCCCCEEeC
Confidence            9999999999999987654   456889999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.85  E-value=6.7e-20  Score=122.98  Aligned_cols=113  Identities=16%  Similarity=0.237  Sum_probs=80.6

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCC-CcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL-PYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~-~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      .+.+|+|++|.|+|++++.+||+++|||++......+.. .....|+..+.. .+........        ++++.|+||
T Consensus         3 ~~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~-~h~~~~~~~~--------~~~~~Hiaf   73 (143)
T cd07243           3 GAHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK-PHDIAFVGGP--------DGKLHHFSF   73 (143)
T ss_pred             CCceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC-cceEEEecCC--------CCCceEEEE
Confidence            456899999999999999999999999997654322111 122456655433 2222221110        134789999


Q ss_pred             EeCCHHH---HHHHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEe
Q 031406          115 AIRDVSK---LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       115 ~v~d~~~---~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~  157 (160)
                      .|+|+++   +.++|+++|+++...+     .+++.+||+|||||.|||.+
T Consensus        74 ~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~  124 (143)
T cd07243          74 FLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFA  124 (143)
T ss_pred             EcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEec
Confidence            9998887   5689999999986432     23578999999999999975

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>PRK10291 glyoxalase I; Provisional

Probab=99.85  E-value=4e-20  Score=121.84  Aligned_cols=111  Identities=23%  Similarity=0.359  Sum_probs=80.3

Q ss_pred             EEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCc----EEEEEecCCCCCCCCCCCCCCCceEEEEEeCCH
Q 031406           44 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  119 (160)
Q Consensus        44 ~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~----~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~  119 (160)
                      +|.|+|+++|++||+++|||++......+...+..+++..++.    .+++......    .....+.+..|+||.|+|+
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~g~~~~hlaf~V~d~   76 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV----DKYELGTAYGHIALSVDNA   76 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCC----CCCcCCCCeeEEEEEeCCH
Confidence            4789999999999999999998765544444555666665432    2333321111    1112345678999999999


Q ss_pred             HHHHHHHHHCCCeEeccC----CC-ceEEEEEcCCCCeEEEEee
Q 031406          120 SKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       120 ~~~~~~l~~~G~~~~~~~----~g-~~~~~~~DPdG~~ie~~~~  158 (160)
                      ++++++|+++|+++...+    .+ .+.++|+|||||.|||++.
T Consensus        77 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~  120 (129)
T PRK10291         77 AEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEE  120 (129)
T ss_pred             HHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEc
Confidence            999999999999987532    33 3567889999999999985

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.85  E-value=1.1e-19  Score=123.76  Aligned_cols=113  Identities=19%  Similarity=0.274  Sum_probs=84.4

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeC---CcEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  115 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g---~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  115 (160)
                      +++||+|.|+|++++++||+++|||++.....     ....++..+   +..+.+........  .. ...+++.|++|.
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~-----~~~~~~~~~~~~~~~l~l~~~~~~~~--~~-~~~~~l~Hiaf~   72 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG-----DRVRLEEGGGGPGAVVDVLEEPDQPR--GR-PGAGTVHHVAFR   72 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC-----CEEEEEecCCCCCCEEEEEeCCCCCC--Cc-ccCCceEEEEEE
Confidence            57999999999999999999999999876533     122344433   56788777532111  11 112446899999


Q ss_pred             eCC---HHHHHHHHHHCCCeEeccC--CCceEEEEEcCCCCeEEEEeeC
Q 031406          116 IRD---VSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       116 v~d---~~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |+|   +++++++|+++|+.+....  .+.+.+||+|||||.|||++..
T Consensus        73 v~d~~dvd~~~~~L~~~Gv~~~~~~~~~~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          73 VPDDEELEAWKERLEALGLPVSGIVDRFYFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CCCHHHHHHHHHHHHHCCCCcccccccccEEEEEEECCCCcEEEEEECC
Confidence            998   8999999999999875432  3457899999999999999865

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.84  E-value=3.8e-19  Score=115.89  Aligned_cols=116  Identities=16%  Similarity=0.186  Sum_probs=84.4

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeCCHHHH
Q 031406           43 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  122 (160)
Q Consensus        43 v~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~~~~  122 (160)
                      -.|.|+|++++++||+++|||++....+.+........+..++..+.+....................|++|.|+|++++
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d~d~~   82 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGDGGVMVGSVRDDYRASSARAGGAGTQGVYVVVDDVDAH   82 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECCEEEEEecCCCcccccccccCCCceEEEEEEECCHHHH
Confidence            46889999999999999999999875533332222345666776676655443221110112223457999999999999


Q ss_pred             HHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEee
Q 031406          123 KMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       123 ~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +++++++|+++..++    .|.+.++++|||||+|+|.++
T Consensus        83 ~~~l~~~G~~v~~~~~~~~~g~~~~~~~DPdG~~~~l~~~  122 (122)
T cd08355          83 YERARAAGAEILREPTDTPYGSREFTARDPEGNLWTFGTY  122 (122)
T ss_pred             HHHHHHCCCEEeeCccccCCCcEEEEEECCCCCEEEEecC
Confidence            999999999987543    466889999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.84  E-value=1.1e-19  Score=120.14  Aligned_cols=110  Identities=22%  Similarity=0.386  Sum_probs=84.2

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeC--
Q 031406           40 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--  117 (160)
Q Consensus        40 i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~--  117 (160)
                      |+||.|.|+|++++++||+++|||++....+      ...++..++.++.+........  .  ...++..|++|.++  
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~~--~--~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE------KTAYFTIGGTWLALNEEPDIPR--N--EIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC------ccceEeeCceEEEEEccCCCCc--C--CcCccceEEEEEecHH
Confidence            5899999999999999999999999865322      1245667777777655432111  1  11234689999998  


Q ss_pred             CHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEeeC
Q 031406          118 DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       118 d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |+++++++|+++|+.+..++    .+++.+||+|||||+|||.++.
T Consensus        71 dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          71 EFDAFYTRLKEAGVNILPGRKRDVRDRKSIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHHHHHHHcCCcccCCCccccCcceEEEEECCCCCEEEEecCc
Confidence            59999999999999986432    3568999999999999999864

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.84  E-value=3e-19  Score=114.95  Aligned_cols=109  Identities=17%  Similarity=0.192  Sum_probs=82.8

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC-cEEEEEecCCCCCCCCCCCCCCCceEEEEEeCC
Q 031406           40 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  118 (160)
Q Consensus        40 i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d  118 (160)
                      +.|++|.|+|++++++||+++||+++..... +.  ....++..++ ....++.......      ..+...|++|.++|
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~f~v~d   71 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GG--GDYAVFSTGGGAVGGLMKAPEPAA------GSPPGWLVYFAVDD   71 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CC--CceEEEEeCCccEEEEecCCCCCC------CCCCeEEEEEEeCC
Confidence            4799999999999999999999999875442 11  1334555654 3455555543321      12335799999999


Q ss_pred             HHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEe
Q 031406          119 VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       119 ~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~  157 (160)
                      +++++++|+++|+++..++    ++++.++++|||||.|+|+|
T Consensus        72 i~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          72 VDAAAARVEAAGGKVLVPPTDIPGVGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHHHCCCEEEeCCcccCCcEEEEEEECCCCCEEEeEC
Confidence            9999999999999987543    36689999999999999986

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.84  E-value=2.4e-19  Score=117.23  Aligned_cols=107  Identities=21%  Similarity=0.305  Sum_probs=80.8

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 031406           37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  115 (160)
Q Consensus        37 ~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  115 (160)
                      ..++.|+.|.|+|+++|++||+++|||+......      ...++.. ++..+.+......          ....|++|.
T Consensus         2 ~~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~l~~~~~~~~----------~~~~h~a~~   65 (123)
T cd08351           2 TVTLNHTIVPARDREASAEFYAEILGLPWAKPFG------PFAVVKLDNGVSLDFAQPDGE----------IPPQHYAFL   65 (123)
T ss_pred             cceEeEEEEEcCCHHHHHHHHHHhcCCEeeeccC------CEEEEEcCCCcEEEEecCCCC----------CCcceEEEE
Confidence            4588999999999999999999999999865321      1233443 3345555443111          124799998


Q ss_pred             eC--CHHHHHHHHHHCCCeEecc-----------CCCceEEEEEcCCCCeEEEEeeC
Q 031406          116 IR--DVSKLKMILDKAGISYTLS-----------KSGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       116 v~--d~~~~~~~l~~~G~~~~~~-----------~~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      ++  |+++++++|+++|+++...           ..+++.+||+|||||.|||++.|
T Consensus        66 v~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  122 (123)
T cd08351          66 VSEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITRP  122 (123)
T ss_pred             eCHHHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEecc
Confidence            87  6999999999999997542           24679999999999999999975

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.84  E-value=3.4e-19  Score=116.95  Aligned_cols=114  Identities=25%  Similarity=0.346  Sum_probs=86.2

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhc---CCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           39 SVHHVGILCENLERSLEFYQNIL---GLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~l---G~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      +|+||.|.|+|++++++||+++|   ||+.......     ...|... ++..+.++........ .....+.+..|+||
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~-----~~~~~~~~~~~~i~l~~~~~~~~~-~~~~~~~g~~hia~   74 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED-----GRSWRAGDGGTYLVLQQADGESAG-RHDRRNPGLHHLAF   74 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc-----CceEEecCCceEEEEEecccCCCc-ccccCCcCeeEEEE
Confidence            57999999999999999999999   9998775421     1244443 6677888776544322 11122344689999


Q ss_pred             EeC---CHHHHHHHHHHCCCeEeccC-------CCceEEEEEcCCCCeEEEEee
Q 031406          115 AIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       115 ~v~---d~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      .|+   |+++++++|+++|+.+...+       .+.+.+|++|||||+|||+.+
T Consensus        75 ~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          75 RAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             EcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            997   58899999999999987543       256899999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.84  E-value=3.5e-19  Score=114.89  Aligned_cols=113  Identities=21%  Similarity=0.321  Sum_probs=81.3

Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeC---CcEEEEEecCCCCCCCCCCCCCCCceEEEEEeCC
Q 031406           42 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  118 (160)
Q Consensus        42 hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g---~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d  118 (160)
                      ||.|.|.|++++++||+++|||++........ ....+.+..+   +..+++.........  .....++..|++|.|+|
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~v~d   77 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGSPETSLVLAPPANPAAM--SGLQPGGTPGLVLATDD   77 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCCCeeEEEEeCCCCcccc--ccccCCCceEEEEEehH
Confidence            89999999999999999999999887543111 1222333332   234554443332211  12223456799999999


Q ss_pred             HHHHHHHHHHCCCeEeccC---CCceEEEEEcCCCCeEEEEe
Q 031406          119 VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       119 ~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~ie~~~  157 (160)
                      +++++++++++|+.+..++   .+++.++++||+||+|||+|
T Consensus        78 i~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          78 IDATYEELKARGVEFSEEPREMPYGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHHhCCCEEeeccccCCCceEEEEECCCCCEEEEeC
Confidence            9999999999999998654   35689999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.83  E-value=3.3e-19  Score=122.45  Aligned_cols=118  Identities=21%  Similarity=0.343  Sum_probs=83.2

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      +.+.+|+|++|.|+|++++++||+++|||++......+.......|+..++....+........      ..+.+.|+||
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~------~~~~~~hiaf   75 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKVHDVAYTRDPAG------ARGRLHHLAY   75 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCceeEEEecCCCC------CCCCceEEEE
Confidence            4678999999999999999999999999998754332222223467766443222322221111      1134689999


Q ss_pred             EeCCH---HHHHHHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEee
Q 031406          115 AIRDV---SKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       115 ~v~d~---~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      .|+|.   ++++++|+++|+++...+     .....+|++|||||+|||.+.
T Consensus        76 ~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          76 ALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             ECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            99854   578899999999986432     123468999999999999886

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.83  E-value=4.7e-19  Score=116.07  Aligned_cols=109  Identities=18%  Similarity=0.280  Sum_probs=81.7

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      .++.+|.|++|.|+|++++.+||+++|||++.....      ...|+..++....+....+.          ....|++|
T Consensus         2 ~~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~i~l~~~~----------~~~~~iaf   65 (124)
T cd08361           2 IELQDIAYVRLGTRDLAGATRFATDILGLQVAERTA------KATYFRSDARDHTLVYIEGD----------PAEQASGF   65 (124)
T ss_pred             ceEEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC------CeEEEEcCCccEEEEEEeCC----------CceEEEEE
Confidence            467899999999999999999999999999765321      23667765432222222111          11478999


Q ss_pred             EeCC---HHHHHHHHHHCCCeEeccC-------CCceEEEEEcCCCCeEEEEeeC
Q 031406          115 AIRD---VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       115 ~v~d---~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      +|++   +++++++++++|+++...+       .+.+++||+|||||.||+...+
T Consensus        66 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          66 ELRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             EECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            9985   9999999999999986532       3356789999999999998765

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.83  E-value=3.3e-19  Score=115.97  Aligned_cols=113  Identities=14%  Similarity=0.141  Sum_probs=76.5

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeCC
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  118 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d  118 (160)
                      ++.++.|.|+|+++|++||+++|||+.....+  .    ...+ .++..+.+...............++...|++|.|+|
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~v~d   74 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG--E----NVTF-EGGFALQEGYSWLEGISKADIIEKSNNFELYFEEED   74 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEeeccC--c----eEEE-eccceeccchhhhccCCcccccccCCceEEEEEehh
Confidence            67899999999999999999999999864322  1    1111 222222221110000000111123345799999999


Q ss_pred             HHHHHHHHHHCCC-eEecc----CCCceEEEEEcCCCCeEEEEee
Q 031406          119 VSKLKMILDKAGI-SYTLS----KSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       119 ~~~~~~~l~~~G~-~~~~~----~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +++++++|+++|. ++..+    ++|.+.++|+|||||.|||.+.
T Consensus        75 vd~~~~~l~~~g~~~~~~~~~~~~~g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          75 FDAFLDKLKRYDNIEYVHPIKEHPWGQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             hHHHHHHHHhcCCcEEecCcccCCCccEEEEEECCCCCEEEEecc
Confidence            9999999999975 56543    3567899999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.83  E-value=5.1e-19  Score=115.20  Aligned_cols=107  Identities=19%  Similarity=0.231  Sum_probs=80.4

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeC-
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  117 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~-  117 (160)
                      ++.||+|.|+|+++|++||+++|||+...... .    ...|+..++..+.+.......         .+..|++|.++ 
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~-~----~~~~~~~~~~~~~~~l~~~~~---------~~~~~~~f~v~~   67 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRPE-D----GALYLRMDDRAWRIAVHPGEA---------DDLAYAGWEVAD   67 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCCC-C----CeEEEEccCCceEEEEEeCCC---------CceeEEEEEECC
Confidence            68999999999999999999999998765322 1    236666655444444332211         23579999997 


Q ss_pred             --CHHHHHHHHHHCCCeEeccC-------CCceEEEEEcCCCCeEEEEeeC
Q 031406          118 --DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       118 --d~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                        |+++++++|+++|+++...+       .+++.+||+|||||.||+...+
T Consensus        68 ~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          68 EAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             HHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence              58889999999999997532       3357899999999999998653

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.83  E-value=3.7e-19  Score=116.00  Aligned_cols=107  Identities=26%  Similarity=0.415  Sum_probs=82.1

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEe--
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI--  116 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v--  116 (160)
                      +|+|+.|.|+|++++.+||+++|||+.....+      ...++..++..+.+.......       ......|++|.+  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~-------~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD------KGAYLEAGDLWLCLSVDANVG-------PAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC------CceEEecCCEEEEEecCCCCC-------CCCCeeeEEEEeCH
Confidence            47899999999999999999999999876443      125666676655554322211       123468999998  


Q ss_pred             CCHHHHHHHHHHCCCeEeccC-CCceEEEEEcCCCCeEEEEee
Q 031406          117 RDVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       117 ~d~~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +|++++++++.++|+++...+ ..++.+||.|||||.|||++.
T Consensus        68 ~dl~~~~~~l~~~G~~~~~~~~~~~~~~~f~DPdG~~ie~~~~  110 (121)
T cd07244          68 EDFASLKEKLRQAGVKEWKENTSEGDSFYFLDPDGHKLELHVG  110 (121)
T ss_pred             HHHHHHHHHHHHcCCcccCCCCCCccEEEEECCCCCEEEEEeC
Confidence            489999999999999886543 346799999999999999874

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.83  E-value=3.3e-19  Score=116.64  Aligned_cols=118  Identities=22%  Similarity=0.354  Sum_probs=89.0

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCC-CCCcceEEEEeCCcEEEEEecCCCCCCCC--CCCCCCCceEEEEEe
Q 031406           40 VHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAI  116 (160)
Q Consensus        40 i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~g~~~~~l~~~~~~~~~~~--~~~~~~~~~hi~f~v  116 (160)
                      |+||+|.|+|++++++||+++|||+.....+.. ......+++..++..+++++.........  ....+.+..|++|.|
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~~f~v   80 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLGNVQIELIEPLDDDSPIAKFLEKRGEGLHHIAFEV   80 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcCCEEEEEEEECCCCCcHHHHHhcCCCceEEEEEEe
Confidence            579999999999999999999999987654432 23344577777888898887654322111  012345678999999


Q ss_pred             CCHHHHHHHHHHCCCeEeccC----CCceEEEEEcCC---CCeEEEEe
Q 031406          117 RDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPD---ANALEFTQ  157 (160)
Q Consensus       117 ~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPd---G~~ie~~~  157 (160)
                      +|++++++++.++|+++..++    .+++.+++.||+   |+.|||+|
T Consensus        81 ~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          81 DDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            999999999999999987654    345666666665   99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.82  E-value=1.6e-18  Score=112.57  Aligned_cols=113  Identities=19%  Similarity=0.175  Sum_probs=83.7

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeCCHHHH
Q 031406           43 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  122 (160)
Q Consensus        43 v~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~~~~  122 (160)
                      +.|.|+|++++.+||+++|||+.......+........+..++..+.+........  ..........|++|.|+|++++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~v~d~~~~   82 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGDSVLMLADEFPEHG--SPASWGGTPVSLHLYVEDVDAT   82 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECCEEEEEecCCcccC--CCCCCCCceEEEEEEeCCHHHH
Confidence            56889999999999999999998875542333333445666777777765432211  0111234457999999999999


Q ss_pred             HHHHHHCCCeEecc----CCCceEEEEEcCCCCeEEEEe
Q 031406          123 KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       123 ~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~ie~~~  157 (160)
                      ++++.++|+++..+    +.+.+.++++|||||.|+|.|
T Consensus        83 ~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          83 FARAVAAGATSVMPPADQFWGDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHHHCCCeEecCcccccccceEEEEECCCCCEEEEec
Confidence            99999999998654    356789999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.82  E-value=9.1e-19  Score=114.34  Aligned_cols=115  Identities=17%  Similarity=0.196  Sum_probs=80.3

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCC--C---CC-CCCCCCCCCceEEE
Q 031406           40 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP--D---PL-SGRPEHGGRDRHTC  113 (160)
Q Consensus        40 i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~--~---~~-~~~~~~~~~~~hi~  113 (160)
                      +.|+.|+|+|++++.+||+++|||+.....+.+    ....+..++..+.+......  .   .. ...+....+..|++
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHESG----DYGELETGETTLAFASHDLAESNLKGGFVKADPAQPPAGFEIA   76 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecCCC----cEEEecCCcEEEEEEcccccccccccCccCCccccCCCcEEEE
Confidence            479999999999999999999999986533211    11223345555555433211  0   00 01111222346899


Q ss_pred             EEeCCHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEee
Q 031406          114 IAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       114 f~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      |.|+|+++++++++++|+++..++    .|.+.++++|||||.||+.++
T Consensus        77 ~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          77 FVTDDVAAAFARAVEAGAVLVSEPKEKPWGQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEcCCHHHHHHHHHHcCCEeccCCccCCCCcEEEEEECCCCCEEEEecC
Confidence            999999999999999999886543    466889999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.82  E-value=9.3e-19  Score=112.79  Aligned_cols=106  Identities=15%  Similarity=0.181  Sum_probs=79.7

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEe
Q 031406           37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  116 (160)
Q Consensus        37 ~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  116 (160)
                      +.+++|+.|.|+|++++++||++ |||+......      ...|+..++....+.......        ...+.|++|.|
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~af~v   65 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD------DELYYRGYGTDPFVYVARKGE--------KARFVGAAFEA   65 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC------CeEEEecCCCccEEEEcccCC--------cCcccEEEEEE
Confidence            35899999999999999999999 9998865422      236666543332333222111        13368999999


Q ss_pred             CCHHHHHHHHHHCCCeEecc---CCCceEEEEEcCCCCeEEEEe
Q 031406          117 RDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       117 ~d~~~~~~~l~~~G~~~~~~---~~g~~~~~~~DPdG~~ie~~~  157 (160)
                      +|.+++.+.+++.|..+...   +.+++.++|+|||||.||++.
T Consensus        66 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~  109 (113)
T cd07267          66 ASRADLEKAAALPGASVIDDLEAPGGGKRVTLTDPDGFPVELVY  109 (113)
T ss_pred             CCHHHHHHHHHcCCCeeecCCCCCCCceEEEEECCCCCEEEEEe
Confidence            99999999999999987653   356789999999999999975

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.82  E-value=9.5e-19  Score=114.07  Aligned_cols=108  Identities=16%  Similarity=0.197  Sum_probs=78.8

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CC-cEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA-EMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        37 ~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      +.+++|++|.|+|++++++||+++|||+.....+.     ..+++.. ++ ....+......         ..+..|++|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~---------~~~~~hiaf   67 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDDQ-----GRVYLKAWDEFDHHSIVLREAD---------TAGLDFMGF   67 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecCC-----ceEEEEccCCCcccEEEeccCC---------CCCeeEEEE
Confidence            46899999999999999999999999998654321     1244544 21 11222211111         123689999


Q ss_pred             EeC---CHHHHHHHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEee
Q 031406          115 AIR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       115 ~v~---d~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      .++   |+++++++++++|+++...+     ..++.+||+|||||.||+++.
T Consensus        68 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  119 (122)
T cd07265          68 KVLDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYAD  119 (122)
T ss_pred             EeCCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEe
Confidence            997   88999999999999986532     235789999999999999874

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.82  E-value=2.1e-19  Score=121.88  Aligned_cols=113  Identities=14%  Similarity=0.138  Sum_probs=79.0

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCC-CCCcceEEEEeCCc--EEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIA  115 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  115 (160)
                      +|+||+|.|+|++++++||+++|||++......+ .......|+..++.  .+......-..      ..+.++.|+||.
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~------~~~~g~~Hiaf~   74 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQ------GPESGVHHAAFE   74 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhc------CCCCceeEEEEE
Confidence            4799999999999999999999999987543222 12234566666432  11110000000      013557999999


Q ss_pred             eCCHHHHH---HHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEe
Q 031406          116 IRDVSKLK---MILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       116 v~d~~~~~---~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~  157 (160)
                      |+|++++.   ++|+++|+++...+     .....+|++|||||+|||+.
T Consensus        75 v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~  124 (153)
T cd07257          75 VHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYT  124 (153)
T ss_pred             cCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEc
Confidence            99999986   99999999987543     12456799999999999985

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.82  E-value=5.8e-19  Score=115.11  Aligned_cols=116  Identities=21%  Similarity=0.400  Sum_probs=83.8

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCC-CcceEEEEe----CCcEEEEEecCCCCCCCCCCCCCCCceEEE
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKL-PYRGAWLWV----GAEMIHLMELPNPDPLSGRPEHGGRDRHTC  113 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~-~~~~~~~~~----g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~  113 (160)
                      +|+||+|.|.|++++++||+++|||+.......... .....++..    ++..++|+........  ......+..|++
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~--~~~~~~~~~hi~   78 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPK--GRRGPGQIHHIA   78 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCC--CCCCCCcEEEEE
Confidence            478999999999999999999999998765442221 112233332    3457777776543221  111223468999


Q ss_pred             EEeC---CHHHHHHHHHHCCCeEeccC--CCceEEEEEcCCCCeEEEE
Q 031406          114 IAIR---DVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFT  156 (160)
Q Consensus       114 f~v~---d~~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~ie~~  156 (160)
                      |.|+   ++++++++++++|+++....  .+.+.+||+||+||+|||.
T Consensus        79 f~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          79 FSVPSEASLDAWRERLRAAGVPVSGVVDHFGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCcccceEeecceEEEEEECCCCCEEEeC
Confidence            9998   57999999999999886532  4678999999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.82  E-value=2.8e-18  Score=112.05  Aligned_cols=112  Identities=29%  Similarity=0.373  Sum_probs=83.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC--cEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIA  115 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~--~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  115 (160)
                      ++|+||.|.|+|++++++||+++|||++....+      ..+++..++  ..+.+.......   .......+..|++|.
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~l~~~~~~~~l~l~~~~~~~---~~~~~~~~~~hi~f~   71 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGGKRPLLVLEEDPDAP---PAPPGATGLYHFAIL   71 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC------CEEEEecCCCeEEEEEEeCCCCC---cccCCCCcEEEEEEE
Confidence            378999999999999999999999999986522      236666655  345555443221   111223446899999


Q ss_pred             eC---CHHHHHHHHHHCCCeEeccC--CCceEEEEEcCCCCeEEEEee
Q 031406          116 IR---DVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       116 v~---d~~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      |+   +++++++++.++|+++....  ...+.+|++|||||+|||.+.
T Consensus        72 v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~DPdG~~iEi~~~  119 (125)
T cd07255          72 LPSRADLAAALRRLIELGIPLVGASDHLVSEALYLSDPEGNGIEIYAD  119 (125)
T ss_pred             CCCHHHHHHHHHHHHHcCCceeccccccceeEEEEECCCCCEEEEEEe
Confidence            97   58899999999999886543  234789999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.81  E-value=8.4e-19  Score=112.63  Aligned_cols=105  Identities=23%  Similarity=0.397  Sum_probs=80.0

Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeC--CH
Q 031406           42 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--DV  119 (160)
Q Consensus        42 hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~--d~  119 (160)
                      |+.|.|+|++++++||+++|||+......      ...++..++..+.+........      ......|++|.|+  |+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~------~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS------KEAYFELAGLWICLMEEDSLQG------PERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC------ceeEEEecCeEEEeccCCCcCC------CCCCccEEEEEcCHHHH
Confidence            79999999999999999999999865432      1255666666665544332111      1234689999995  89


Q ss_pred             HHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEee
Q 031406          120 SKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       120 ~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +++++++.++|+++....    .+++.+|++|||||+||++..
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          69 DEYTERLKALGVEMKPERPRVQGEGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHHHHcCCccCCCccccCCCceEEEEECCCCCEEEEEeC
Confidence            999999999999986531    357899999999999999864

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PRK06724 hypothetical protein; Provisional

Probab=99.81  E-value=2.1e-18  Score=113.60  Aligned_cols=108  Identities=21%  Similarity=0.267  Sum_probs=75.6

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhc---CCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNIL---GLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  112 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~l---G~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi  112 (160)
                      |..+++||+|.|+|+++|++||+++|   |++....          +.+..+...+.|........      ...+..|+
T Consensus         4 ~~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~----------~~~~~g~~~l~l~~~~~~~~------~~~g~~h~   67 (128)
T PRK06724          4 LRAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNE----------VAYSTGESEIYFKEVDEEIV------RTLGPRHI   67 (128)
T ss_pred             cCcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeee----------EeeeCCCeeEEEecCCcccc------CCCCceeE
Confidence            45689999999999999999999966   5554311          01112333344433221110      11246899


Q ss_pred             EEEe---CCHHHHHHHHHHCCCeEeccC-------CCceEEEEEcCCCCeEEEEeeC
Q 031406          113 CIAI---RDVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       113 ~f~v---~d~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      ||.|   +++++++++|+++|+++..++       ++.+.+||+|||||.||+...+
T Consensus        68 af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         68 CYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             EEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCC
Confidence            9998   689999999999999986432       2347889999999999998754

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=2.8e-18  Score=111.24  Aligned_cols=109  Identities=17%  Similarity=0.171  Sum_probs=78.0

Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCc--EEEEEecCCCCCC-CCCCCCCCCceEEEEEeCC
Q 031406           42 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPL-SGRPEHGGRDRHTCIAIRD  118 (160)
Q Consensus        42 hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~--~~~l~~~~~~~~~-~~~~~~~~~~~hi~f~v~d  118 (160)
                      +..|.|+|++++++||+++|||+.....+      ....+..++.  .+.+......... ...+..+.+ .|++|.|+|
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~-~~~~~~v~d   76 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD------WYVSLRSPDGGVELAFMLPGHETVPAAQYQFQGQG-LILNFEVDD   76 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC------cEEEEecCCCceEEEEccCCCCCCcchhcccCCce-EEEEEEECC
Confidence            67899999999999999999999876421      1244444443  4444433322111 011122333 599999999


Q ss_pred             HHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEe
Q 031406          119 VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       119 ~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~  157 (160)
                      ++++++++.++|+++..++    .|.+.++++|||||+|||+|
T Consensus        77 id~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          77 VDAEYERLKAEGLPIVLPLRDEPWGQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             HHHHHHHHHhcCCCeeeccccCCCcceEEEEECCCCCEEEEEC
Confidence            9999999999999876442    45689999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.81  E-value=4.4e-18  Score=112.58  Aligned_cols=113  Identities=25%  Similarity=0.363  Sum_probs=82.6

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeC---CcEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  115 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g---~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  115 (160)
                      +|+|++|.|+|++++++||+++|||++....+.    ....|+..+   +..+.+........    .....+..|++|.
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~h~~f~   72 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL----GGLVFLSRDPDEHHQIALITGRPAAP----PPGPAGLNHIAFE   72 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC----CcEEEEEecCCCceEEEEEecCCCCC----CCCCCCceEEEEE
Confidence            479999999999999999999999998764331    123555554   23566655433211    1122446899999


Q ss_pred             eCCHH---HHHHHHHHCCCeEeccC--CCceEEEEEcCCCCeEEEEeeC
Q 031406          116 IRDVS---KLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       116 v~d~~---~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |+|++   ++++++.++|+++....  ++++.+|++||+||.|||++..
T Consensus        73 v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  121 (134)
T cd08348          73 VDSLDDLRDLYERLRAAGITPVWPVDHGNAWSIYFRDPDGNRLELFVDT  121 (134)
T ss_pred             eCCHHHHHHHHHHHHHCCCCccccCCCCceeEEEEECCCCCEEEEEEcC
Confidence            98765   57899999999886543  3468899999999999999753

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.81  E-value=9.9e-20  Score=118.79  Aligned_cols=117  Identities=25%  Similarity=0.438  Sum_probs=84.0

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecC--CCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCC-CCCCceEEEEE
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARP--HDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE-HGGRDRHTCIA  115 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~--~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~-~~~~~~hi~f~  115 (160)
                      +|+||+|.|+|++++++||+++|||++.....  .........++..++..+.+.............. ......|+++.
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~   80 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEGHIELFLNPSPPPRASGHSFPEHGGHHIAFL   80 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSSCEEEEEEESSSSSSEEEHHHSHTSEEEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccccceeeeeeccccccccccccccccceeEEEE
Confidence            68999999999999999999999999987655  1222234466666777787777665443321110 00024577777


Q ss_pred             eC---CHHHHHHHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEE
Q 031406          116 IR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEF  155 (160)
Q Consensus       116 v~---d~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~  155 (160)
                      +.   |+++++++|+++|+++...+     .....+|++||+||.|||
T Consensus        81 ~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   81 AFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             ESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             eccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            65   77788999999999987653     234556899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.81  E-value=2.5e-18  Score=110.94  Aligned_cols=107  Identities=21%  Similarity=0.302  Sum_probs=82.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeC-CcEEEEEecCCCCCCCCCCCCCCCceEEEEEe
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  116 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g-~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  116 (160)
                      ++++|+.|.|+|++++++||+++|||++....+      ...|+..+ +..+.+.......         .+..|++|.|
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---------~~~~h~~~~v   65 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSEDDHHSLVLTEGDE---------PGVDALGFEV   65 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCCCCcEEEEEEeCCC---------CCceeEEEEc
Confidence            378999999999999999999999999886542      23677766 4444443322211         2368999999


Q ss_pred             C---CHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEeeC
Q 031406          117 R---DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       117 ~---d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      +   ++++++++++++|+++...+    .+++.+|+.||+||.+|+....
T Consensus        66 ~~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  115 (117)
T cd07240          66 ASEEDLEALAAHLEAAGVAPEEASDPEPGVGRGLRFQDPDGHLLELFVEA  115 (117)
T ss_pred             CCHHHHHHHHHHHHHcCCceEEcCccCCCCceEEEEECCCCCEEEEEEcc
Confidence            7   68899999999999986643    4568999999999999998653

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.81  E-value=2.5e-18  Score=111.94  Aligned_cols=110  Identities=20%  Similarity=0.281  Sum_probs=80.1

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC-cEEEEEecCCCCCCCCCCCCCCCceEEE
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTC  113 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~  113 (160)
                      +.+.+|+|+.|.|+|++++++||+++|||++....+      ...|+..++ ...+.+......        ..+..|++
T Consensus         2 ~~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~~~--------~~~~~h~a   67 (121)
T cd09013           2 FDIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTESP--------EAGLGHIA   67 (121)
T ss_pred             CCccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEeeCC--------CCceEEEE
Confidence            356799999999999999999999999999876532      235565432 111111111110        13468999


Q ss_pred             EEeC---CHHHHHHHHHHCCCeEecc---CCCceEEEEEcCCCCeEEEEee
Q 031406          114 IAIR---DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       114 f~v~---d~~~~~~~l~~~G~~~~~~---~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      |.++   ++++++++++++|+++...   +..+..+||+|||||.||+...
T Consensus        68 f~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  118 (121)
T cd09013          68 WRASSPEALERRVAALEASGLGIGWIEGDPGHGKAYRFRSPDGHPMELYWE  118 (121)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCccccccCCCCCcceEEEECCCCCEEEEEEe
Confidence            9997   6888999999999987432   3456789999999999999864

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.81  E-value=2.3e-18  Score=111.67  Aligned_cols=107  Identities=21%  Similarity=0.304  Sum_probs=80.1

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEe-
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI-  116 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v-  116 (160)
                      .+|+|+.|.|+|++++++||+++|||+......      ...|+..++....++.......        ....|++|.+ 
T Consensus         2 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~v~   67 (120)
T cd08362           2 TALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD------GIVYLRATGSEHHILRLRRSDR--------NRLDVVSFSVA   67 (120)
T ss_pred             ceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC------CEEEEECCCCccEEEEeccCCC--------CCCceEEEEeC
Confidence            589999999999999999999999999865432      2356665443333333222111        1257999999 


Q ss_pred             --CCHHHHHHHHHHCCCeEeccC------CCceEEEEEcCCCCeEEEEee
Q 031406          117 --RDVSKLKMILDKAGISYTLSK------SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       117 --~d~~~~~~~l~~~G~~~~~~~------~g~~~~~~~DPdG~~ie~~~~  158 (160)
                        +++++++++++++|+++..++      .+++.++|+||+||.||+++.
T Consensus        68 ~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  117 (120)
T cd08362          68 SRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSAD  117 (120)
T ss_pred             CHHHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEec
Confidence              478999999999999986542      356889999999999999864

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.81  E-value=3e-18  Score=113.69  Aligned_cols=106  Identities=21%  Similarity=0.385  Sum_probs=79.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC--c--EEEEEecCCCCCCCCCCCCCCCceEEE
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--E--MIHLMELPNPDPLSGRPEHGGRDRHTC  113 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~--~--~~~l~~~~~~~~~~~~~~~~~~~~hi~  113 (160)
                      .+++|+.|.|+|+++|++||+++|||+......  .   ...|+..++  .  .+.+......         ..++.|++
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~~~~~i~l~~~~~~---------~~g~~hia   67 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G---RGAFLRAAGGGDHHNLFLIKTPAP---------MAGFHHAA   67 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C---cEEEEECCCCCCCcEEEEecCCCC---------CCcceEEE
Confidence            478999999999999999999999999875432  1   246676642  2  3334332211         24578999


Q ss_pred             EEeCCHHHHH---HHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEe
Q 031406          114 IAIRDVSKLK---MILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       114 f~v~d~~~~~---~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~  157 (160)
                      |.|+|++++.   ++|+++|+++...+     .+.+.+||+||+||.|||..
T Consensus        68 f~v~d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~  119 (134)
T cd08360          68 FEVGDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGA  119 (134)
T ss_pred             EEeCCHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEc
Confidence            9999888766   69999999986432     23466899999999999985

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.80  E-value=3.2e-18  Score=116.21  Aligned_cols=112  Identities=17%  Similarity=0.283  Sum_probs=81.5

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCC---CCCcceEEEEeCCc--EEEEEecCCCCCCCCCCCCCCCceE
Q 031406           37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHD---KLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH  111 (160)
Q Consensus        37 ~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~---~~~~~~~~~~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~h  111 (160)
                      ..+|+||+|.|+|++++++||+++|||++.......   ......+|+..++.  .+.+.....          ..++.|
T Consensus         7 ~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~----------~~g~~H   76 (154)
T cd07237           7 DQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAEGPG----------PKRIHH   76 (154)
T ss_pred             CCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEcCCC----------CceeEE
Confidence            357999999999999999999999999986532211   11234566666432  233322211          234789


Q ss_pred             EEEEeCCHH---HHHHHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEee
Q 031406          112 TCIAIRDVS---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       112 i~f~v~d~~---~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      ++|.|+|++   +++++|+++|+++...+     .+.+.+|++||+||.|||...
T Consensus        77 iaf~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~  131 (154)
T cd07237          77 LMLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWG  131 (154)
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccC
Confidence            999998665   58999999999987543     356889999999999999753

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=5e-18  Score=111.18  Aligned_cols=110  Identities=15%  Similarity=0.180  Sum_probs=75.5

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCC-----------CCcceEEEEeC----CcEEEEEecCCCCCCCCCC
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----------LPYRGAWLWVG----AEMIHLMELPNPDPLSGRP  103 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~-----------~~~~~~~~~~g----~~~~~l~~~~~~~~~~~~~  103 (160)
                      ++.|++|.|+|+++|++||+++|||++......+.           ..+..+++..+    +..++|.......+    .
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~----~   77 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGD----Y   77 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCC----C
Confidence            67999999999999999999999999866443332           11122334332    23555554332211    1


Q ss_pred             CCCCCceEEEEEeCCHHHHHHHHHHCCCeEeccCCCceEEEEEcCCCCeEEEEe
Q 031406          104 EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       104 ~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~ie~~~  157 (160)
                      ..|++  |++|.|++. ++.++|+++|+.+...+.+  .++++||||+.|||.-
T Consensus        78 ~~g~~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~~--~~fi~DPDG~~ie~~~  126 (127)
T cd08358          78 ELGND--FLGITIHSK-QAVSNAKKHNWPVTEVEDG--VYEVKAPGGYKFYLID  126 (127)
T ss_pred             CCCCC--EEEEEEECH-HHHHHHHHCCCceecCCCC--EEEEECCCCCEEEEec
Confidence            22333  566666666 5569999999999876653  7899999999999963

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.80  E-value=4.9e-18  Score=116.08  Aligned_cols=112  Identities=21%  Similarity=0.324  Sum_probs=76.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeC
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  117 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~  117 (160)
                      ++|+||+|.|+|++++++||+++|||++......+.......|+..++....+.....         .+.++.|+||.|+
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~~~~i~l~~~---------~~~~~~Hiaf~v~   72 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGGVHDTALTGG---------NGPRLHHVAFWVP   72 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCCcceEEEecC---------CCCceeEEEEEcC
Confidence            4789999999999999999999999998653322222223355554432222211111         1234689999998


Q ss_pred             C---HHHHHHHHHHCCCeE--eccC-----CCceEEEEEcCCCCeEEEEee
Q 031406          118 D---VSKLKMILDKAGISY--TLSK-----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       118 d---~~~~~~~l~~~G~~~--~~~~-----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      |   +++++++|+++|+..  ...+     .+.+.+|++|||||.||+++.
T Consensus        73 ~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~  123 (161)
T cd07256          73 EPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTG  123 (161)
T ss_pred             CHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeec
Confidence            5   777889999999863  2221     234679999999999999863

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.79  E-value=5.7e-18  Score=110.14  Aligned_cols=104  Identities=25%  Similarity=0.371  Sum_probs=78.9

Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeCCHHH
Q 031406           42 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK  121 (160)
Q Consensus        42 hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~~~  121 (160)
                      ...|.|+|+++|++||++ |||+.....+.     ...++..++..++|.......+       .....|++|.|+|+++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~-----~~~~~~~~~~~l~l~~~~~~~~-------~~~~~~~~~~v~dvd~   71 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA-----GYMILRRGDLELHFFAHPDLDP-------ATSPFGCCLRLPDVAA   71 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC-----CEEEEEcCCEEEEEEecCcCCC-------CCCcceEEEEeCCHHH
Confidence            467899999999999999 99998764432     2344566777788876542211       1123579999999999


Q ss_pred             HHHHHHHCCCeEe--------cc---CCCceEEEEEcCCCCeEEEEee
Q 031406          122 LKMILDKAGISYT--------LS---KSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       122 ~~~~l~~~G~~~~--------~~---~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      ++++|+++|+++.        ..   +.|.+.++|+|||||.|||.|.
T Consensus        72 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          72 LHAEFRAAGLPETGSGIPRITPPEDQPWGMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHHHHhCccccccCCCcccCCcCCCCceeEEEEECCCCCEEEeecC
Confidence            9999999999742        11   2567899999999999999884

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.79  E-value=6.2e-18  Score=113.58  Aligned_cols=106  Identities=17%  Similarity=0.326  Sum_probs=78.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCc--EEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIA  115 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  115 (160)
                      .+++|+.|.|+|++++++||+++|||+......  .   ...|+..++.  .+.+...  .         ..+..|++|.
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~--~---~~~~l~~~~~~~~~~l~~~--~---------~~~~~hiaf~   66 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG--D---QMAFLRCNSDHHSIAIARG--P---------HPSLNHVAFE   66 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC--C---eEEEEECCCCcceEEEccC--C---------CCceEEEEEE
Confidence            378999999999999999999999999864321  1   2356666543  2333221  1         1346899999


Q ss_pred             eCCHHHHH---HHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEeeC
Q 031406          116 IRDVSKLK---MILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       116 v~d~~~~~---~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |+|++++.   ++|+++|+++...+     .+.+.+||+||+||.|||++..
T Consensus        67 v~d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~  118 (144)
T cd07239          67 MPSIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSEL  118 (144)
T ss_pred             CCCHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCc
Confidence            99888775   89999999986542     2346789999999999998753

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=1.3e-17  Score=108.40  Aligned_cols=114  Identities=26%  Similarity=0.508  Sum_probs=82.8

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC-cEEEEEecCCCCCC-CC-CCCCCCCceEEEEEe
Q 031406           40 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPL-SG-RPEHGGRDRHTCIAI  116 (160)
Q Consensus        40 i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~-~~-~~~~~~~~~hi~f~v  116 (160)
                      +.++.|.|.|++++++||+++|||++... +.+    ...++..++ ..+.++........ .. ......+..|++|.+
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~-~~~----~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v   75 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLK-EDR----RLAFFWVGGRGMLLLFDPGATSTPGGEIPPHGGSGPGHFAFAI   75 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeec-CCC----ceEEEEcCCCcEEEEEecCCcccccCCCCCCCCCCccEEEEEc
Confidence            46899999999999999999999998763 211    235667665 45555554322110 00 111123468999998


Q ss_pred             C--CHHHHHHHHHHCCCeEeccC---CCceEEEEEcCCCCeEEEEee
Q 031406          117 R--DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       117 ~--d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +  |++++++++.++|+++....   .+++.++++|||||+||+++.
T Consensus        76 ~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          76 PAEELAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             CHHHHHHHHHHHHhcCCceeccccCCCCeeEEEEECCCCCEEEEecC
Confidence            4  89999999999999886643   467899999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.78  E-value=1.4e-17  Score=109.91  Aligned_cols=107  Identities=19%  Similarity=0.331  Sum_probs=79.9

Q ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCc--EEEEEecCCCCCCCCCCCCCCCceEEEEEeCC
Q 031406           41 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  118 (160)
Q Consensus        41 ~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d  118 (160)
                      +||.|.|+|++++++||+++||++.......+ .....+|+..++.  .+.+.....          ..+..|++|.|+|
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~----------~~~~~hl~~~v~d   69 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDEDHHDLALFPGPE----------RPGLHHVAFEVES   69 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCCcceEEEEcCCC----------CCCeeEEEEEcCC
Confidence            59999999999999999999999987654322 2234567776543  333333211          1346899999998


Q ss_pred             HH---HHHHHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEee
Q 031406          119 VS---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       119 ~~---~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      ++   +++++++++|+++...+     .+.+.++|+|||||.|||.+.
T Consensus        70 ~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~  117 (131)
T cd08343          70 LDDILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAE  117 (131)
T ss_pred             HHHHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcC
Confidence            75   68899999999987532     235788999999999999875

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.78  E-value=9.5e-18  Score=109.07  Aligned_cols=107  Identities=23%  Similarity=0.306  Sum_probs=78.5

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeC--CcEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        37 ~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g--~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      +.++.|+.|.|+|++++++||+++|||++....+      ...|+...  .....+......         ..+..|++|
T Consensus         2 ~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---------~~~~~hi~~   66 (121)
T cd07266           2 ILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD------DRIYLRGLEEFIHHSLVLTKAP---------VAGLGHIAF   66 (121)
T ss_pred             cceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC------CeEEEEecCCCceEEEEEeeCC---------CCceeEEEE
Confidence            5689999999999999999999999999875422      12455432  222233222111         123689999


Q ss_pred             EeC---CHHHHHHHHHHCCCeEecc-----CCCceEEEEEcCCCCeEEEEee
Q 031406          115 AIR---DVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       115 ~v~---d~~~~~~~l~~~G~~~~~~-----~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      .|.   |+++++++++++|+++...     +..++.+|+.|||||.||++..
T Consensus        67 ~v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          67 RVRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             ECCCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence            994   8889999999999998643     1235789999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.78  E-value=1.2e-17  Score=108.70  Aligned_cols=112  Identities=21%  Similarity=0.294  Sum_probs=76.5

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeC-CcEEEEEecCCCCC-CCCCCCCCCCceEEEEEeC
Q 031406           40 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDP-LSGRPEHGGRDRHTCIAIR  117 (160)
Q Consensus        40 i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g-~~~~~l~~~~~~~~-~~~~~~~~~~~~hi~f~v~  117 (160)
                      ++||+|.|+|+++|++||+. |||+.......    ...+.+..+ +..+.+........ ....+.......|++|.+.
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~----~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~   75 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD----EPHVEAVLPGGVRLAWDTVESIRSFTPGWTPTGGHRIALAFLCE   75 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC----CCcEEEEeCCCEEEEEEcccceeeecCCCCCCCCCcEEEEEEcC
Confidence            57999999999999999975 99997643221    112445554 45555543321110 0011112233468888875


Q ss_pred             ---CHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEE
Q 031406          118 ---DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFT  156 (160)
Q Consensus       118 ---d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~  156 (160)
                         |+++++++|+++|+++..++    .|.+.++++|||||.|||+
T Consensus        76 ~~~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          76 TPAEVDALYAELVGAGYPGHKEPWDAPWGQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             CHHHHHHHHHHHHHCCCCcCCCCccCCCCCEEEEEECCCCCEEEEe
Confidence               89999999999999876543    4668899999999999996

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.78  E-value=2e-17  Score=105.83  Aligned_cols=105  Identities=30%  Similarity=0.472  Sum_probs=79.6

Q ss_pred             EEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeCCHHHHH
Q 031406           44 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK  123 (160)
Q Consensus        44 ~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~~~~~  123 (160)
                      .|.|+|++++++||+++|||+......  .  ....++..++..++|.........     ......|++|.++|+++++
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~--~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--E--PGYAFLSRGGAQLMLSEHDGDEPV-----PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--C--CcEEEEEeCCEEEEEeccCCCCCC-----CCCCcEEEEEEeCCHHHHH
Confidence            689999999999999999999876543  1  123556667777777665433211     1233468999999999999


Q ss_pred             HHHHHCCCe-Eecc----CCCceEEEEEcCCCCeEEEEe
Q 031406          124 MILDKAGIS-YTLS----KSGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       124 ~~l~~~G~~-~~~~----~~g~~~~~~~DPdG~~ie~~~  157 (160)
                      +++.++|+. +..+    ..+.+.++++||+||.|||+|
T Consensus        74 ~~l~~~G~~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AELKAKGADLIVYPPEDQPWGMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHcCCcceecCccCCCcccEEEEEECCCCCEEEecC
Confidence            999999998 4433    235588999999999999986

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=1.4e-17  Score=108.89  Aligned_cols=112  Identities=17%  Similarity=0.120  Sum_probs=77.4

Q ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeC-CcEEEEEecCCCCC--CCCCC-CCCCCceEEEEEe
Q 031406           41 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDP--LSGRP-EHGGRDRHTCIAI  116 (160)
Q Consensus        41 ~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g-~~~~~l~~~~~~~~--~~~~~-~~~~~~~hi~f~v  116 (160)
                      .+++|.|+|+++|++||+. |||+.......+.    ..++..+ +..+.+........  ..... .......|++|.|
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~----~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~f~v   76 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK----AACMVISDNIFVMLLTEDFFQTFTPKPIADTKKSTEVLISLSA   76 (124)
T ss_pred             EEEEeecCCHHHHHHHHHH-CCCEEccccCCCC----eEEEEECCceEEEEEcHHHHhhccCCCcccCCCCCeEEEEEeC
Confidence            6899999999999999987 8999764333222    2444454 45666655321100  00000 1123347999999


Q ss_pred             C---CHHHHHHHHHHCCCeEeccC---CCceEEEEEcCCCCeEEEEe
Q 031406          117 R---DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       117 ~---d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~ie~~~  157 (160)
                      +   ++++++++++++|+++..++   .+.+.+||+|||||+||++.
T Consensus        77 ~~~~~vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          77 DSREEVDELVEKALAAGGKEFREPQDHGFMYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             CCHHHHHHHHHHHHHCCCcccCCcccCCceEEEEEECCCCCEEEEEE
Confidence            8   58899999999999987644   34467899999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=1.2e-17  Score=107.71  Aligned_cols=100  Identities=18%  Similarity=0.213  Sum_probs=75.7

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeCCHHHH
Q 031406           43 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  122 (160)
Q Consensus        43 v~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~~~~  122 (160)
                      ..|.|+|+++|++||++ |||+.....+      ...++..++..+.+........        ....+++|.|+|++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~l~~~~~~l~l~~~~~~~~--------~~~~~~~~~v~did~~   69 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEND------NLAYFRLGNCAFYLQDYYVKDW--------AENSMLHLEVDDLEAY   69 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCC------CEEEEEcCCEEEEeecCCCccc--------ccCCEEEEEECCHHHH
Confidence            56889999999999988 9999976532      2366777777766644322111        1135799999999999


Q ss_pred             HHHHHHCCCeEe---------ccCCCceEEEEEcCCCCeEEEEe
Q 031406          123 KMILDKAGISYT---------LSKSGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       123 ~~~l~~~G~~~~---------~~~~g~~~~~~~DPdG~~ie~~~  157 (160)
                      +++|+++|+++.         ..++|.+.++|+|||||.|+|.|
T Consensus        70 ~~~l~~~G~~~~~~~~~~~~~~~~~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHIKALGLPKKFPGVKLPPITQPWWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHHcCCcccccceecCccccCCCcEEEEEECCCccEEEeeC
Confidence            999999998642         12357799999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.77  E-value=2e-17  Score=105.29  Aligned_cols=100  Identities=27%  Similarity=0.506  Sum_probs=72.7

Q ss_pred             EEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCc----EEEEEecCCCCCCCCCCCCCCCceEEEEEeCCHH
Q 031406           45 ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS  120 (160)
Q Consensus        45 l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~----~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~~  120 (160)
                      |.|+|++++++||+++|||++....+      ....+..+..    ...+........      ...+..|++|.|+|++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~v~dv~   68 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP------DYVDFSLGFRFHDGVIEFLQFPDPPG------PPGGGFHLCFEVEDVD   68 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET------SEEEEEETEEEEEEEEEEEEEESSSS------SSSSEEEEEEEESHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC------CeEEEEeccchhhhhHHHccCCcccc------CCCceeEEEEEEcCHH
Confidence            68999999999999999999988433      2244444321    233443332111      1244689999999999


Q ss_pred             HHHHHHHHCCCeEecc----CCCceEEEEEcCCCCeEEEE
Q 031406          121 KLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  156 (160)
Q Consensus       121 ~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~ie~~  156 (160)
                      +++++++++|+++..+    +.+.+.+++.|||||.|||+
T Consensus        69 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   69 ALYERLKELGAEIVTEPRDDPWGQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHHHHHTTSEEEEEEEEETTSEEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHCCCeEeeCCEEcCCCeEEEEEECCCCCEEEeC
Confidence            9999999999998654    35669999999999999986

...

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=2e-17  Score=107.83  Aligned_cols=111  Identities=22%  Similarity=0.304  Sum_probs=75.0

Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCC--CCCC-CCCCCCceEEEE--Ee
Q 031406           42 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP--LSGR-PEHGGRDRHTCI--AI  116 (160)
Q Consensus        42 hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~--~~~~-~~~~~~~~hi~f--~v  116 (160)
                      ||.|.|+|+++|++||+++|||++.....  .    ...+..++..+.+........  .... ........|++|  .+
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~   75 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE--T----WVDFDFFGHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLILSE   75 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC--C----cccccccCcEEEEEeccCCCcccccCCCCCCccCCceEEEEEeH
Confidence            89999999999999999999999854321  1    122334445555443322111  0001 111122457654  56


Q ss_pred             CCHHHHHHHHHHCCCeEeccC--------CCceEEEEEcCCCCeEEEEee
Q 031406          117 RDVSKLKMILDKAGISYTLSK--------SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       117 ~d~~~~~~~l~~~G~~~~~~~--------~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +|+++++++|+++|+++..++        .+.+.+|++|||||.|||..+
T Consensus        76 ~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  125 (125)
T cd08357          76 EEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKAF  125 (125)
T ss_pred             HHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEeeC
Confidence            799999999999999987432        235889999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.77  E-value=2.8e-17  Score=103.98  Aligned_cols=108  Identities=30%  Similarity=0.442  Sum_probs=85.6

Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeCCHHH
Q 031406           42 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK  121 (160)
Q Consensus        42 hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~~~  121 (160)
                      |++|.|+|++++.+||+++|||+.......  ......++..++..+++....+....    ..+....|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~~~~i~l~~~~~~~~~----~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLGGTRLELFEGDEPAPA----PSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecCCceEEEecCCCCCCc----ccCCCeeEEEEECCCHHH
Confidence            789999999999999999999998776532  11244556667778888887654321    223446899999999999


Q ss_pred             HHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEE
Q 031406          122 LKMILDKAGISYTLSK----SGRPAIFTRDPDANALEF  155 (160)
Q Consensus       122 ~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~  155 (160)
                      +++++.++|+.+...+    .+.+.+++.||+|+.|||
T Consensus        75 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERLKAAGVEVLGEPREEPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHHcCCcccCCCcCCCCCcEEEEEECCCCcEEeC
Confidence            9999999999887653    457899999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=5.8e-17  Score=104.01  Aligned_cols=102  Identities=18%  Similarity=0.168  Sum_probs=74.8

Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeC---CcEEEEEecCCCCCCCCCCCCCCCceEEEEEeCC
Q 031406           42 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  118 (160)
Q Consensus        42 hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g---~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d  118 (160)
                      ...|.|+|++++++||+++|||+.....   .   ...++..+   +..+.+.......         ....|++|.|+|
T Consensus         3 ~~~l~v~Dl~~s~~FY~~~lG~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~i~~~v~d   67 (112)
T cd07238           3 VPNLPVADPEAAAAFYADVLGLDVVMDH---G---WIATFASPQNMTVQVSLATEGGTA---------TVVPDLSIEVDD   67 (112)
T ss_pred             cceEecCCHHHHHHHHHHhcCceEEEcC---C---ceEEEeecCCCCcEEEEecCCCCC---------CCCCEEEEEeCC
Confidence            3578899999999999999999976421   1   12334432   2344444332111         124699999999


Q ss_pred             HHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEee
Q 031406          119 VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       119 ~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +++++++|+++|+++..++    +|.+.+++.||+||+|++++.
T Consensus        68 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          68 VDAALARAVAAGFAIVYGPTDEPWGVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHHHHHhcCCeEecCCccCCCceEEEEEECCCCCEEEEEEc
Confidence            9999999999999987643    355889999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=5.9e-17  Score=104.25  Aligned_cols=106  Identities=22%  Similarity=0.262  Sum_probs=78.0

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeCC---
Q 031406           43 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---  118 (160)
Q Consensus        43 v~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---  118 (160)
                      +.|.|+|++++++||+++||++.....+      ....+.. ++..+.++........   .....+..|++|.+++   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELSP------TFALFVLGSGVKLGLWSRHTVEPA---SDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCCC------ceEEEEeCCCcEEEEeeccccCCC---CCCCCCceEEEEEcCCHHH
Confidence            6789999999999999999999765322      1233444 4567777765443211   1112335799999985   


Q ss_pred             HHHHHHHHHHCCCeEeccC---CCceEEEEEcCCCCeEEEEe
Q 031406          119 VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       119 ~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~ie~~~  157 (160)
                      ++++++++.++|+++..++   ..++.++|+|||||.||++.
T Consensus        73 ~~~~~~~~~~~g~~v~~~~~~~~~g~~~~~~DPdGn~ie~~~  114 (114)
T cd07261          73 VDALYAEWQAKGVKIIQEPTEMDFGYTFVALDPDGHRLRVFA  114 (114)
T ss_pred             HHHHHHHHHHCCCeEecCccccCCccEEEEECCCCCEEEeeC
Confidence            8889999999999987653   33578999999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=8.6e-17  Score=104.45  Aligned_cols=107  Identities=22%  Similarity=0.386  Sum_probs=76.8

Q ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeCC--
Q 031406           41 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD--  118 (160)
Q Consensus        41 ~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d--  118 (160)
                      .|+.|.|+|++++.+||+++||++.....+  .   ...| ..++..+.+.........      ..+..|++|.+++  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~--~---~~~~-~~~~~~~~~~~~~~~~~~------~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD--D---YAKF-LLEDPRLNFVLNERPGAP------GGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC--C---eeEE-EecCCceEEEEecCCCCC------CCCeeEEEEEeCCHH
Confidence            589999999999999999999998765422  1   1233 333334444333222111      0346899999987  


Q ss_pred             -HHHHHHHHHHCCCeEeccCC------CceEEEEEcCCCCeEEEEeeC
Q 031406          119 -VSKLKMILDKAGISYTLSKS------GRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       119 -~~~~~~~l~~~G~~~~~~~~------g~~~~~~~DPdG~~ie~~~~~  159 (160)
                       ++++++++.++|+++...+.      ..+.+|++||+||.|||++.-
T Consensus        71 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             78899999999999876431      246799999999999999753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.75  E-value=2.9e-17  Score=109.93  Aligned_cols=104  Identities=17%  Similarity=0.242  Sum_probs=76.3

Q ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC-cEEEEEecCCCCCCCCCCCCCCCceEEEEEeCCH
Q 031406           41 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  119 (160)
Q Consensus        41 ~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~  119 (160)
                      .||.|.|+|++++++||+++|||++......     ...|+...+ ...+.+.....        ...+++|++|.|+|+
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~-----~~~~l~~~~~~~~h~~~~~~~--------~~~gl~Hiaf~v~~~   67 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED-----RIVFMRCHPNPFHHTFAVGPA--------SSSHFHHVNFMVTDI   67 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC-----EEEEEEcCCCCCcceeeeccC--------CCCceEEEEEECCCH
Confidence            4899999999999999999999998764321     346666543 22233222111        124589999999865


Q ss_pred             ---HHHHHHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEe
Q 031406          120 ---SKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       120 ---~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~  157 (160)
                         ++++++|+++|+++...+     .+.+.+|++||+|+.|||..
T Consensus        68 ~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~  113 (141)
T cd07258          68 DDIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSF  113 (141)
T ss_pred             HHHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEe
Confidence               567999999999986432     34578999999999999975

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=8.7e-17  Score=104.81  Aligned_cols=107  Identities=23%  Similarity=0.320  Sum_probs=75.9

Q ss_pred             eeeEEEEeCCHHHHHHHHHHh---cCCEEeeecCCCCCCcceEEEEeC--CcEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           40 VHHVGILCENLERSLEFYQNI---LGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        40 i~hv~l~v~D~~~a~~Fy~~~---lG~~~~~~~~~~~~~~~~~~~~~g--~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      +.|++|.|+|+++|++||+++   ||++......  .   ...++..+  +..+.+........    +. .++..|++|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~--~---~~~~~~~~~~~~~~~l~~~~~~~~----~~-~~~~~hi~f   70 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDG--P---GAVGYGKGGGGPDFWVTKPFDGEP----AT-AGNGTHVAF   70 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecC--C---ceeEeccCCCCceEEEeccccCCC----CC-CCCceEEEE
Confidence            579999999999999999998   6998765431  1   12334443  45666655432111    11 122479999


Q ss_pred             EeCC---HHHHHHHHHHCCCeEeccC-------CCceEEEEEcCCCCeEEEE
Q 031406          115 AIRD---VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFT  156 (160)
Q Consensus       115 ~v~d---~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~ie~~  156 (160)
                      .|++   ++++++++.++|+.+...+       .+.+.+||+|||||.|||+
T Consensus        71 ~v~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          71 AAPSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             ECCCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            9986   7888999999999886543       1235789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.75  E-value=5.5e-17  Score=121.26  Aligned_cols=114  Identities=22%  Similarity=0.352  Sum_probs=79.5

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCc-ceEEEEeCCcE--EEEEecCCCCCCCCCCCCCCCc
Q 031406           33 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-RGAWLWVGAEM--IHLMELPNPDPLSGRPEHGGRD  109 (160)
Q Consensus        33 ~~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~-~~~~~~~g~~~--~~l~~~~~~~~~~~~~~~~~~~  109 (160)
                      ..+.+.+|+||+|.|+|++++++||+++|||+.......+.... ...|+..++..  +.+...         + ..+.+
T Consensus       139 ~~~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~g~~  208 (303)
T TIGR03211       139 RGVGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNKAHDIAFVGD---------P-EPGKL  208 (303)
T ss_pred             CCcCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCCCcccceecC---------C-CCCce
Confidence            34557899999999999999999999999999865432222111 23455543221  111110         1 11337


Q ss_pred             eEEEEEeCC---HHHHHHHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEE
Q 031406          110 RHTCIAIRD---VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFT  156 (160)
Q Consensus       110 ~hi~f~v~d---~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~  156 (160)
                      +|+||.|+|   +++++++|+++|+++...+     ..++.+||+|||||+||+.
T Consensus       209 ~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~  263 (303)
T TIGR03211       209 HHVSFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETF  263 (303)
T ss_pred             EEEEEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEe
Confidence            899999996   5557889999999986543     1357899999999999997

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.74  E-value=1.4e-16  Score=102.38  Aligned_cols=101  Identities=26%  Similarity=0.398  Sum_probs=71.6

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCc--EEEEEecCCCCCCCCCCCCCCCceE--EE
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAE--MIHLMELPNPDPLSGRPEHGGRDRH--TC  113 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~--~~~l~~~~~~~~~~~~~~~~~~~~h--i~  113 (160)
                      +|+||.|.|.|++++++||+ .|||++....+       ..++.. ++.  .+.+....  .         ....|  ++
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~~   62 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEGD-------GLELRTAGNDHRWARLLEGA--R---------KRLAYLSFG   62 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeecC-------ceEEEecCCCceEEEeecCC--C---------CceeeEEEE
Confidence            68999999999999999997 69999865321       133333 322  23332211  1         11344  45


Q ss_pred             EEeCCHHHHHHHHHHCCCeEeccC--CCceEEEEEcCCCCeEEEEee
Q 031406          114 IAIRDVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       114 f~v~d~~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +.++|+++++++|.++|+++...+  .+.+.+||.||+||.|||...
T Consensus        63 ~~~~d~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~DP~Gn~iel~~~  109 (112)
T cd08344          63 IFEDDFAAFARHLEAAGVALAAAPPGADPDGVWFRDPDGNLLQVKVA  109 (112)
T ss_pred             eEhhhHHHHHHHHHHcCCceecCCCcCCCCEEEEECCCCCEEEEecC
Confidence            556799999999999999986543  345689999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=1.7e-16  Score=102.85  Aligned_cols=110  Identities=20%  Similarity=0.277  Sum_probs=78.2

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCC--CCCCCceEEEEEe---C
Q 031406           43 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRP--EHGGRDRHTCIAI---R  117 (160)
Q Consensus        43 v~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~--~~~~~~~hi~f~v---~  117 (160)
                      |.|.|+|++++.+||+++|||++... ..+    ...++..++..+++++..........+  ..+....|++|.+   +
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~-~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSAD-SND----GVAFFQLGGLVLALFPREELAKDAGVPVPPPGFSGITLAHNVRSEE   76 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceeccc-CCC----ceEEEEcCCeEEEEecchhhhhhcCCCCCCCCccceEEEEEcCCHH
Confidence            68999999999999999999998654 111    235666777777777643211110001  1122234566655   5


Q ss_pred             CHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEe
Q 031406          118 DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       118 d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~  157 (160)
                      |++++++++++.|+++..++    .+++.++++||+||+|||..
T Consensus        77 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          77 EVDAVLARAAAAGATIVKPPQDVFWGGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             HHHHHHHHHHhCCCEEecCCccCCCCceEEEEECCCCCEEEEee
Confidence            89999999999999987543    35789999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.73  E-value=1.8e-16  Score=117.69  Aligned_cols=107  Identities=21%  Similarity=0.280  Sum_probs=79.7

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEe
Q 031406           37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  116 (160)
Q Consensus        37 ~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  116 (160)
                      +.++.|++|.|+|+++|++||+++|||+......  .   ...|+..++....+.......         ..+.|++|.|
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~---~~~~~~~~~~~~~~~l~~~~~---------~~~~~~~f~V   66 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEGE--N---DALYLRLDSRAHRIAVHPGES---------DDLAYAGWEV   66 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCCC--C---ceEEEEcCCCceEEEEEECCc---------CCeeeEeeee
Confidence            3589999999999999999999999998754322  1   124556654333332222211         2257899999


Q ss_pred             CC---HHHHHHHHHHCCCeEeccC-------CCceEEEEEcCCCCeEEEEe
Q 031406          117 RD---VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       117 ~d---~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~ie~~~  157 (160)
                      ++   ++++.++|+++|+++...+       .+++.++|+|||||.||++.
T Consensus        67 ~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~  117 (286)
T TIGR03213        67 ADEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYY  117 (286)
T ss_pred             CCHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEE
Confidence            98   8889999999999987532       34578999999999999986

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.72  E-value=3.3e-16  Score=116.54  Aligned_cols=113  Identities=27%  Similarity=0.428  Sum_probs=78.9

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCc--EEEEEecCCCCCCCCCCCCCCCceEE
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHT  112 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~hi  112 (160)
                      +.+.+++||+|.|+|++++++||+++|||++......+.......|+..++.  .+.+..           ..+.+++|+
T Consensus       132 ~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~Hi  200 (294)
T TIGR02295       132 VSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGGVHDIALTN-----------GNGPRLHHI  200 (294)
T ss_pred             ccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCCcCceEeec-----------CCCCceeeE
Confidence            3567999999999999999999999999998754332222222345544322  122211           112457999


Q ss_pred             EEEeCC---HHHHHHHHHHCCCe--EeccC-----CCceEEEEEcCCCCeEEEEee
Q 031406          113 CIAIRD---VSKLKMILDKAGIS--YTLSK-----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       113 ~f~v~d---~~~~~~~l~~~G~~--~~~~~-----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      ||.|+|   +++++++|+++|++  +...+     .+...+|++||+||+||+++.
T Consensus       201 af~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~  256 (294)
T TIGR02295       201 AYWVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTG  256 (294)
T ss_pred             EEEcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEec
Confidence            999998   45568999999997  44332     124679999999999999864

The enzyme from Bacillus brevis contains manganese.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.71  E-value=6.1e-16  Score=114.81  Aligned_cols=113  Identities=15%  Similarity=0.262  Sum_probs=79.5

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCC--C-CCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEE
Q 031406           37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPH--D-KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  113 (160)
Q Consensus        37 ~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~--~-~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~  113 (160)
                      +.+|+||+|.|+|++++++||+++|||++......  + ...+..+|+..++....+.....+        ...+++|+|
T Consensus       140 ~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~l~~~~--------~~~~~~Hia  211 (286)
T TIGR03213       140 DQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNERHHSLAFAAGP--------SEKRLNHLM  211 (286)
T ss_pred             CccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCCcceEEEecCC--------CCCceEEEE
Confidence            46899999999999999999999999998654211  1 111234677665433222211111        123478999


Q ss_pred             EEeCCHHH---HHHHHHHCCCeEecc-C---CCceEEEEEcCCCCeEEEEe
Q 031406          114 IAIRDVSK---LKMILDKAGISYTLS-K---SGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       114 f~v~d~~~---~~~~l~~~G~~~~~~-~---~g~~~~~~~DPdG~~ie~~~  157 (160)
                      |.|+|+++   ++++|+++|+....+ .   .+.+++|++||+|++||+..
T Consensus       212 f~v~d~~~v~~~~~~l~~~G~~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~  262 (286)
T TIGR03213       212 LEVDTLDDVGLALDRVDADGIVASTLGRHTNDHMVSFYVATPSGWLVEYGW  262 (286)
T ss_pred             EEcCCHHHHHHHHHHHHHCCCEEecCCcCCCCCeEEEEEECCCCcEEEeec
Confidence            99998777   799999999933322 1   34678999999999999975

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.69  E-value=8.9e-16  Score=114.23  Aligned_cols=107  Identities=21%  Similarity=0.278  Sum_probs=79.6

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeC--CcEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        37 ~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g--~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      +.+++||.|.|+|++++++||+++|||++....+      ...++...  .....+......         ..+..|++|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~------~~~~~~~~~~~~~~~l~l~~~~---------~~~~~hiaf   66 (294)
T TIGR02295         2 ILRTGHVELRVTDLDKSREFYVDLLGFRETESDK------EYIYLRGIEEFQHHSLVLTKAP---------SAALSYIGF   66 (294)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC------CeEEEeccCcCCceEEEeeeCC---------CcCccEEEE
Confidence            5789999999999999999999999999876432      12445432  112222221111         123689999


Q ss_pred             EeC---CHHHHHHHHHHCCCeEeccC--CCceEEEEEcCCCCeEEEEee
Q 031406          115 AIR---DVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       115 ~v~---d~~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      .|+   |+++++++|+++|+++...+  .+.+.+||+|||||.|||++.
T Consensus        67 ~v~~~~dl~~~~~~l~~~Gv~v~~~~~~~~~~~~~~~DPdG~~iEl~~~  115 (294)
T TIGR02295        67 RVSKEEDLDKAADFFQKLGHPVRLVRDGGQPEALRVEDPFGYPIEFYFE  115 (294)
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEeecCCCCceEEEEECCCCCEEEEEEc
Confidence            997   78899999999999987543  346899999999999999873

The enzyme from Bacillus brevis contains manganese.

>PLN02300 lactoylglutathione lyase

Probab=99.69  E-value=1.2e-15  Score=113.34  Aligned_cols=120  Identities=20%  Similarity=0.222  Sum_probs=87.2

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCc----EEEEEecCCCCCCCCCCCCCCCceE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRH  111 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~----~~~l~~~~~~~~~~~~~~~~~~~~h  111 (160)
                      +..++.|+.|.|+|++++.+||+++|||+.......+...+...++..++.    .+++......    ..+..+.+..|
T Consensus       151 ~~~~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~----~~~~~g~~~~~  226 (286)
T PLN02300        151 TPEPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGV----TEYTKGNAYAQ  226 (286)
T ss_pred             CCCcceeEEEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCC----CccccCCceeE
Confidence            345789999999999999999999999998754333334455566554321    3333221111    11223455789


Q ss_pred             EEEEeCCHHHHHHHHHHCCCeEeccC---C--CceEEEEEcCCCCeEEEEeeC
Q 031406          112 TCIAIRDVSKLKMILDKAGISYTLSK---S--GRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       112 i~f~v~d~~~~~~~l~~~G~~~~~~~---~--g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      ++|.|+|++++++++.++|+++..++   .  +++.++|+||||+.++|.+..
T Consensus       227 i~~~v~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~  279 (286)
T PLN02300        227 IAIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNI  279 (286)
T ss_pred             EEEecCCHHHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccc
Confidence            99999999999999999999997653   2  247899999999999998753

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.68  E-value=2.9e-16  Score=100.60  Aligned_cols=94  Identities=26%  Similarity=0.396  Sum_probs=76.7

Q ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC--cEEEEEecCCCCCCCCCCCCCCCceEEEEEeCC
Q 031406           41 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  118 (160)
Q Consensus        41 ~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~--~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d  118 (160)
                      +||+|.|+|+++|++||+++||++.......+....+..++..++  .+++|++.........  ..+.+++||||.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~~~~~~~--~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLDGDSPLD--RGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESSTTCHHH--HTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCCCCcccc--cCCCCEEEEEEEeCC
Confidence            699999999999999999999998776555556667778888876  5899999876542111  256779999999999


Q ss_pred             HHHHHHHHHHCCCeEecc
Q 031406          119 VSKLKMILDKAGISYTLS  136 (160)
Q Consensus       119 ~~~~~~~l~~~G~~~~~~  136 (160)
                      ++++.++|+++|+++...
T Consensus        79 ~d~~~~~l~~~G~~~~~~   96 (109)
T PF13669_consen   79 LDAAIARLEAQGFRVLDE   96 (109)
T ss_dssp             HHHHHHHHHHTTECEEEC
T ss_pred             HHHHHHHHHHCCCEEccc
Confidence            999999999999998653

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.68  E-value=2e-15  Score=112.84  Aligned_cols=107  Identities=19%  Similarity=0.258  Sum_probs=78.4

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CC-cEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA-EMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        37 ~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      +.+++|+.|.|+|++++++||+++|||++......      .+++.. ++ ....+......         ..++.|++|
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~---------~~g~~hiaf   66 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDGQ------RVYLKAWDEWDHYSVILTEAD---------TAGLDHMAF   66 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecCc------eEEEEeccccccceEeeccCC---------CCceeEEEE
Confidence            45899999999999999999999999998764321      234443 21 11122111111         123689999


Q ss_pred             EeC---CHHHHHHHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEee
Q 031406          115 AIR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       115 ~v~---d~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      .|+   |+++++++|+++|+++...+     ..++.+||+|||||.|||++.
T Consensus        67 ~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~  118 (303)
T TIGR03211        67 KVESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAE  118 (303)
T ss_pred             EeCCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEc
Confidence            998   78899999999999986532     346789999999999999974

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.66  E-value=7.1e-15  Score=95.16  Aligned_cols=115  Identities=20%  Similarity=0.235  Sum_probs=82.4

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCc-EE-EEEecCCCCCCCCCCCCCCCceEEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MI-HLMELPNPDPLSGRPEHGGRDRHTC  113 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~-~~-~l~~~~~~~~~~~~~~~~~~~~hi~  113 (160)
                      +...+.|..|.++|++++++||+++|||+.........  ...+.+..++. .. .+...+..     .+  +...-++.
T Consensus         6 ~~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~--~~y~~f~~~~~~~gG~l~~~~~~-----~p--~~~~~~iy   76 (127)
T COG3324           6 EKGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGE--MRYAVFPADGAGAGGGLMARPGS-----PP--GGGGWVIY   76 (127)
T ss_pred             cCCccEEEeeecCCHHHHHHHHHHhhCceecccccCCC--ceEEEEECCCccccceeccCCcC-----CC--CCCCEEEE
Confidence            44578999999999999999999999999876433211  22233433331 11 11111111     11  12346789


Q ss_pred             EEeCCHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEeeC
Q 031406          114 IAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       114 f~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |.|+|++++.+++.++|.++..++    ++++.+.+.||+||+|.++++.
T Consensus        77 ~~v~did~~l~rv~~~GG~V~~p~~~~p~~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          77 FAVDDIDATLERVVAAGGKVLRPKTEFPGGGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             EecCChHHHHHHHHhcCCeEEecccccCCceEEEEEECCCCCEEEEeecC
Confidence            999999999999999999998764    4789999999999999999864

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.64  E-value=8.5e-15  Score=96.50  Aligned_cols=119  Identities=18%  Similarity=0.296  Sum_probs=81.5

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCC----CCC-CCCCCceEEE
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS----GRP-EHGGRDRHTC  113 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~----~~~-~~~~~~~hi~  113 (160)
                      ++.++.|.+.+..+...||..+||++.....+.+..+.. .|+......++|...-+....+    ..+ ..+.+++|||
T Consensus        42 r~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~-v~~~~~~~~~ELthn~Gtes~~~~~~~ngN~~prGfgHIc  120 (170)
T KOG2944|consen   42 RVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVS-VFVFSRNAKLELTHNWGTESPPDQAYLNGNKEPRGFGHIC  120 (170)
T ss_pred             hhccceeechhhhhHhhhHHHhhcccccccCccCCCCCc-eEEecccCceeeecCCCCCCCcchhhcCCCCCCCccceEE
Confidence            455666666666666666666666665544443333222 6777777778887765543332    111 2234679999


Q ss_pred             EEeCCHHHHHHHHHHCCCeEeccC-CCc--eEEEEEcCCCCeEEEEee
Q 031406          114 IAIRDVSKLKMILDKAGISYTLSK-SGR--PAIFTRDPDANALEFTQV  158 (160)
Q Consensus       114 f~v~d~~~~~~~l~~~G~~~~~~~-~g~--~~~~~~DPdG~~ie~~~~  158 (160)
                      |+|+|+++++++|+++|+++...+ +|.  ..+++.||||+-|||...
T Consensus       121 i~V~di~sac~~lkekGV~f~Kk~~dGk~K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  121 IEVDDINSACERLKEKGVRFKKKLKDGKMKPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             EEeCCHHHHHHHHHHhCceeeecCCCccccceeEEECCCCCeEEEeec
Confidence            999999999999999999987654 332  468999999999999764

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.57  E-value=1.1e-13  Score=86.49  Aligned_cols=112  Identities=25%  Similarity=0.439  Sum_probs=78.4

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeC--CcEEEEEecCCCCCCCCCC--CCCCCceEEE-
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRP--EHGGRDRHTC-  113 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g--~~~~~l~~~~~~~~~~~~~--~~~~~~~hi~-  113 (160)
                      .+-|++|.|+|++++++||.++||+.......        .|+.++  +.|+.........+....+  ..+--..|++ 
T Consensus         4 ~~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd--------~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGv   75 (138)
T COG3565           4 VPFHLAIPVNDLDETRRFYGEVLGCKEGRSTD--------TWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFGV   75 (138)
T ss_pred             cceEEeeeccccHHHHhhhhhhcccccccccc--------eEEEeeecccEEEEEecCCcccccCcccCCCCCCCccceE
Confidence            46899999999999999999999998655433        555553  4454444433332221111  1122235664 


Q ss_pred             -EEeCCHHHHHHHHHHCCCeEeccC--------CCceEEEEEcCCCCeEEEEee
Q 031406          114 -IAIRDVSKLKMILDKAGISYTLSK--------SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       114 -f~v~d~~~~~~~l~~~G~~~~~~~--------~g~~~~~~~DPdG~~ie~~~~  158 (160)
                       +.++|.-++.++|.++|+.+..++        ..++.+++.||.||.+|+..+
T Consensus        76 Vl~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~f  129 (138)
T COG3565          76 VLPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGF  129 (138)
T ss_pred             EEEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecc
Confidence             456799999999999999886653        347899999999999999753

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.53  E-value=4.1e-13  Score=96.20  Aligned_cols=113  Identities=25%  Similarity=0.378  Sum_probs=84.3

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCc-EEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 031406           37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIA  115 (160)
Q Consensus        37 ~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~-~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  115 (160)
                      ...+..++|.|+|++.+..||++++|+.+..+..      +..-+..|+. -+.|.+.+.....   +....++.|++|.
T Consensus         8 ~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~------~~v~L~vgg~~LL~L~q~~~a~~~---~~~~aGLyH~AfL   78 (265)
T COG2514           8 PTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD------GSVTLGVGGTPLLTLEQFPDARRP---PPRAAGLYHTAFL   78 (265)
T ss_pred             CcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC------ceEEEeeCCEEEEEEEeCCCCCCC---Cccccceeeeeee
Confidence            3578999999999999999999999999887544      2355667766 3444444433221   1223557999999


Q ss_pred             eC---CHHHHHHHHHHCCCeEecc--CCCceEEEEEcCCCCeEEEEee
Q 031406          116 IR---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       116 v~---d~~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      ++   |+..+..++.+.|+.+...  ..-...+||.||+||-||++-.
T Consensus        79 lP~r~~L~~~l~hl~~~~~~l~Ga~DH~vSEAlYl~DPEGNGIEiYaD  126 (265)
T COG2514          79 LPTREDLARVLNHLAEEGIPLVGASDHLVSEALYLEDPEGNGIEIYAD  126 (265)
T ss_pred             cCCHHHHHHHHHHHHhcCCcccccCcchhheeeeecCCCCCeEEEEec
Confidence            99   5667788888999988633  2346789999999999999864

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.49  E-value=6.2e-13  Score=84.43  Aligned_cols=118  Identities=19%  Similarity=0.222  Sum_probs=81.1

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCC---CCCCCceEEEEE
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRP---EHGGRDRHTCIA  115 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~---~~~~~~~hi~f~  115 (160)
                      ....|.|.|+|++++++||+. |||+.......+.   ....+..+...+.|++..........+   ...+.-..+|+.
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~---a~~mi~~~ni~vMLL~~~~fq~F~~~~i~dt~~s~evli~ls   78 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDED---AACMIISDNIFVMLLEEARFQTFTKRQIADTTKSREVLISLS   78 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCccccc---ceeEEEeccEEEEEeccHHhhhhcccccccccCCceEEEEec
Confidence            346789999999999999986 9999876554333   223344455566666554332211111   122334568888


Q ss_pred             eC---CHHHHHHHHHHCCCeEeccC---CCceEEEEEcCCCCeEEEEeeCC
Q 031406          116 IR---DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVDG  160 (160)
Q Consensus       116 v~---d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~ie~~~~~~  160 (160)
                      +.   +++++.+++.+.|.+...++   +.-+..-|.|||||.||+...+|
T Consensus        79 ~~s~eevd~~v~ka~eaGGk~~~~~~d~gfMYg~~fqDpDGh~wE~l~m~~  129 (133)
T COG3607          79 AGSREEVDELVDKALEAGGKPANEPQDEGFMYGRSFQDPDGHVWEFLWMDP  129 (133)
T ss_pred             cCcHHHHHHHHHHHHHcCCCCCCCccccccccceeeeCCCCCeEEEEEeCH
Confidence            87   67888999999999886543   23466788999999999998764

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.45  E-value=6.7e-13  Score=93.09  Aligned_cols=99  Identities=17%  Similarity=0.151  Sum_probs=71.4

Q ss_pred             eeeeeEEEEeC--CHHHHHHHHHHhcCCEEeeecCCCC--CCcceEEEEeC--CcEEEEEecCCC--CCCCC---CCCCC
Q 031406           38 VSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDK--LPYRGAWLWVG--AEMIHLMELPNP--DPLSG---RPEHG  106 (160)
Q Consensus        38 ~~i~hv~l~v~--D~~~a~~Fy~~~lG~~~~~~~~~~~--~~~~~~~~~~g--~~~~~l~~~~~~--~~~~~---~~~~~  106 (160)
                      .+++||++.|+  |+++++.||+++|||+.......+.  .......+..+  +..+.|.+....  .+...   ....|
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~~~~~s~~~~fl~~~~G   81 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPASGKRKSQIQEFLEYYGG   81 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCCCCCccHHHHHHHHhCC
Confidence            47899999999  9999999999999999876543222  23334455543  456777765542  11111   11236


Q ss_pred             CCceEEEEEeCCHHHHHHHHHHCCCeEecc
Q 031406          107 GRDRHTCIAIRDVSKLKMILDKAGISYTLS  136 (160)
Q Consensus       107 ~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~  136 (160)
                      .++.||||.|+|+++++++|+++|+++...
T Consensus        82 ~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~  111 (191)
T cd07250          82 AGVQHIALATDDIFATVAALRARGVEFLPI  111 (191)
T ss_pred             CceeEEEEECCCHHHHHHHHHHcCCeeccC
Confidence            678999999999999999999999998654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.43  E-value=1.5e-11  Score=80.82  Aligned_cols=108  Identities=18%  Similarity=0.135  Sum_probs=76.4

Q ss_pred             EEEEe-CCHHHHHHHHHHhcCCEEeeecCCC----------CCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceE
Q 031406           43 VGILC-ENLERSLEFYQNILGLEINEARPHD----------KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRH  111 (160)
Q Consensus        43 v~l~v-~D~~~a~~Fy~~~lG~~~~~~~~~~----------~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~h  111 (160)
                      ..|.+ .|.++|++||+++||+++......+          ...+....+..++..+.+.........     ..+...+
T Consensus         3 p~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~l~~~d~~~~~~~-----~~~~~~~   77 (128)
T cd06588           3 PYLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQRLMASDGGPGFPF-----TFGNGIS   77 (128)
T ss_pred             eEEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCEEEEEEcCCCCCCC-----CCCCCEE
Confidence            45667 9999999999999999988654311          122235667778887777665433221     1122367


Q ss_pred             EEEEeCC---HHHHHHHHHHCCCeEecc----CCCceEEEEEcCCCCeEEEE
Q 031406          112 TCIAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  156 (160)
Q Consensus       112 i~f~v~d---~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~ie~~  156 (160)
                      +++.|+|   +++++++|++.| ++..+    ++|.+.++++||+|+.|+|.
T Consensus        78 l~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          78 LSVECDSEEEADRLFEALSEGG-TVLMPLQKTFWSPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EEEECCCHHHHHHHHHHHhcCC-eEeccchhcCcccccEEEECCCCCEEEeC
Confidence            8999886   677889987766 66544    35778999999999999873

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.36  E-value=1.2e-10  Score=76.75  Aligned_cols=114  Identities=19%  Similarity=0.163  Sum_probs=86.0

Q ss_pred             EEEEeC-CHHHHHHHHHHhcCCEEeeecCCCC----------CCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceE
Q 031406           43 VGILCE-NLERSLEFYQNILGLEINEARPHDK----------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRH  111 (160)
Q Consensus        43 v~l~v~-D~~~a~~Fy~~~lG~~~~~~~~~~~----------~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~h  111 (160)
                      ..|..+ |.++|.+||+++||.+.....+...          ...-.+.+.+++..+.+..........   ..++....
T Consensus         4 PYl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~~im~sd~~~~~~~~---~~~~~s~~   80 (136)
T COG2764           4 PYLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGSTIMLSDAFPDMGAT---EGGGTSLS   80 (136)
T ss_pred             eEEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCEEEEEecCCCccCcc---cCCCeeEE
Confidence            456778 9999999999999999887655444          344556788888777776654433211   11222356


Q ss_pred             EEEEeCCHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEeeC
Q 031406          112 TCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       112 i~f~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |.+.++|++++++++.+.|+++..+.    +|.++..++||.|+.|-|....
T Consensus        81 l~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG~r~G~v~D~fGv~W~l~~~~  132 (136)
T COG2764          81 LDLYVEDVDAVFERAAAAGATVVMPLEDTFWGDRYGQVTDPFGVVWMLNTPV  132 (136)
T ss_pred             EEEEehHHHHHHHHHHhcCCeEEecchhcCcccceEEEECCCCCEEEEecCc
Confidence            77888899999999999998887763    6889999999999999997653

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.31  E-value=1e-10  Score=89.42  Aligned_cols=97  Identities=12%  Similarity=0.130  Sum_probs=72.1

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCC--CCCCCCCceEEEEEe
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAI  116 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~--~~~~~~~~~hi~f~v  116 (160)
                      +++|+.+.|+|++++.+||.+.|||+......... ......+..|+..+.|...........  ...+|.+..|+||.|
T Consensus         2 ~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~-~~~~~~~~~G~~~l~L~~~~~~~s~~~~~~~~hg~gv~~iaf~V   80 (353)
T TIGR01263         2 GFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHR-EKASHVLRQGQINFVLTAPYSSDSPAADFAAKHGDGVKDVAFRV   80 (353)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCC-ceeEEEEEeCCEEEEEecCCCCCchHHHHHHhCCCceEEEEEEE
Confidence            68999999999999999999999999876521111 112234556777888887654432111  113567789999999


Q ss_pred             CCHHHHHHHHHHCCCeEecc
Q 031406          117 RDVSKLKMILDKAGISYTLS  136 (160)
Q Consensus       117 ~d~~~~~~~l~~~G~~~~~~  136 (160)
                      +|++++++++.++|+++..+
T Consensus        81 ~Dv~~a~~~l~~~Ga~~v~~  100 (353)
T TIGR01263        81 DDAAAAFEAAVERGAEPVQA  100 (353)
T ss_pred             CCHHHHHHHHHHCCCEeccC
Confidence            99999999999999998654

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.28  E-value=4.3e-11  Score=91.43  Aligned_cols=104  Identities=16%  Similarity=0.197  Sum_probs=73.0

Q ss_pred             CceeeeeeeEEEEeC--CHHHHHHHHHHhcCCEEeeecCCCC--CCcceEEEEe--CCcEEEEEecCCCC--CCCC---C
Q 031406           34 DYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDK--LPYRGAWLWV--GAEMIHLMELPNPD--PLSG---R  102 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~--D~~~a~~Fy~~~lG~~~~~~~~~~~--~~~~~~~~~~--g~~~~~l~~~~~~~--~~~~---~  102 (160)
                      .+.+.+++||++.|.  |+++++.||+++|||+.........  .......+..  |...++|.++....  ....   .
T Consensus       153 ~~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~g~~~i~L~ep~~~~~~s~i~~fl~  232 (353)
T TIGR01263       153 GVGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPDGKVKIPLNEPASGKDKSQIEEFLE  232 (353)
T ss_pred             CCCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCCCcEEEEEeccCCCCCCCHHHHHHH
Confidence            455789999999999  9999999999999998875433211  1222223333  44578877653221  1111   1


Q ss_pred             CCCCCCceEEEEEeCCHHHHHHHHHHCCCeEeccC
Q 031406          103 PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK  137 (160)
Q Consensus       103 ~~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~  137 (160)
                      ...|.++.||||.|+|+++++++|+++|+++...+
T Consensus       233 ~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P  267 (353)
T TIGR01263       233 FYNGAGVQHIALNTDDIVRTVRALRARGVEFLDTP  267 (353)
T ss_pred             HcCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCC
Confidence            12367789999999999999999999999987543

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=99.26  E-value=2.4e-11  Score=78.86  Aligned_cols=119  Identities=23%  Similarity=0.324  Sum_probs=72.1

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcc-eEEEEe-CC-cEEEEEecC--------CCCCCCCCCCCC-
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYR-GAWLWV-GA-EMIHLMELP--------NPDPLSGRPEHG-  106 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~-~~~~~~-g~-~~~~l~~~~--------~~~~~~~~~~~~-  106 (160)
                      +++|++|.|+|+++|++||+++||++............. ...+.. .. .........        ............ 
T Consensus         2 ~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (138)
T COG0346           2 GIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPGG   81 (138)
T ss_pred             ceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecCc
Confidence            689999999999999999999999999876543332210 111111 11 011111100        000000000111 


Q ss_pred             -CCceEEEEEeCC---HHHHHHHHHHCCCeEeccCC--CceEEEEEcCCCCeEEEEe
Q 031406          107 -GRDRHTCIAIRD---VSKLKMILDKAGISYTLSKS--GRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       107 -~~~~hi~f~v~d---~~~~~~~l~~~G~~~~~~~~--g~~~~~~~DPdG~~ie~~~  157 (160)
                       .+..|+++.+++   ..+........|..+.....  ....+|++||||+.||+.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          82 DLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGVHVYFRDPDGILIELAT  138 (138)
T ss_pred             hhccCceeEecccccccceEEEeeCCCCCEEEeecCCCcceEEEEECCCCcEEEeeC
Confidence             235799999998   66667777777888755321  2227999999999999974

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.25  E-value=5.5e-11  Score=83.71  Aligned_cols=119  Identities=18%  Similarity=0.200  Sum_probs=86.1

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCC-----------CCcceEEEEeCCcEEEEEecCCCCCCCCCCC
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPE  104 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~-----------~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~  104 (160)
                      +..+..|+.+.|.|.++++.||+++||+++....+.+.           ..++..++..|...-+++.....+-......
T Consensus        14 ~~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~Ye   93 (299)
T KOG2943|consen   14 DTRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSKYE   93 (299)
T ss_pred             cchheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCcccee
Confidence            34578999999999999999999999999886544333           4455677777644333332222222233456


Q ss_pred             CCCCceEEEEEeCCHHHHHHHHHHCCCeEeccCCCceEEEEEcCCCCeEEEEee
Q 031406          105 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       105 ~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      .|..+.||.+.++|+-..++.+...|.    ...+.-.+++.||||+.|++.+.
T Consensus        94 lGndfg~i~I~s~dv~~~ve~v~~p~~----~~~g~~~~~v~dPdGykF~l~~~  143 (299)
T KOG2943|consen   94 LGNDFGGITIASDDVFSKVEKVNAPGG----KGSGCGIAFVKDPDGYKFYLIDR  143 (299)
T ss_pred             ccCCcccEEEeHHHHHHHHHHhcCcCC----cccceEEEEEECCCCcEEEEecc
Confidence            678889999999999998888877655    22345568899999999999863

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=99.15  E-value=5.3e-10  Score=83.50  Aligned_cols=104  Identities=16%  Similarity=0.168  Sum_probs=70.2

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeC
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  117 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~  117 (160)
                      ....||+|.|+|+++|++||+.+|++.. +..+  .    ...+  ++..+.+..... +..      ...-.-+|+.++
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~LF~~n~-Fsde--~----a~cm--~dtI~vMllt~~-D~~------~~~evLl~Ls~~  309 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSKMFGLEC-WDGD--K----LFLL--GKTSLYLQQTKA-EKK------NRGTTTLSLELE  309 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHHHhCCCC-CCCC--c----cccc--cCcEEEEEecCC-CCC------CcceEEEEeccC
Confidence            3567999999999999999999988874 3222  1    1222  554444433333 111      122356899998


Q ss_pred             ---CHHHHHHHHHHCCCeEeccC-CCceEEEEEcCCCCeEEEEe
Q 031406          118 ---DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       118 ---d~~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdG~~ie~~~  157 (160)
                         +++++++++.++|.....++ +.+..--|.|||||.||++.
T Consensus       310 Sre~VD~lv~~A~aaGG~~~~~~~D~Gf~rsf~D~DGH~WEi~~  353 (357)
T PRK01037        310 CEHDFVRFLRRWEMLGGELGEQADGHFPLRLVFDLDGHIWVVSC  353 (357)
T ss_pred             CHHHHHHHHHHHHHcCCCCCCCcccccCcceeECCCCCEEEEEE
Confidence               67788999999988664433 32336778899999999985

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=99.13  E-value=3.4e-10  Score=86.90  Aligned_cols=100  Identities=12%  Similarity=0.097  Sum_probs=74.5

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCC-----CcceEEEEeCC--cEEEEEecCC---CCCCCC---C
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL-----PYRGAWLWVGA--EMIHLMELPN---PDPLSG---R  102 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~-----~~~~~~~~~g~--~~~~l~~~~~---~~~~~~---~  102 (160)
                      .+.+|+||++.|.+++.+..||+++|||+.......+..     +.+...+..++  ..+.|.++..   ..+...   .
T Consensus       177 gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~g~v~ipLnEP~~~~~~~SqI~eFL~  256 (398)
T PLN02875        177 GLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNNEMVLLPLNEPTFGTKRKSQIQTYLE  256 (398)
T ss_pred             CcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCCCcEEEEeccCCCCCCCcChHHHHHH
Confidence            357899999999999999999999999988754332221     23455566643  5778777653   222222   1


Q ss_pred             CCCCCCceEEEEEeCCHHHHHHHHHHC----CCeEec
Q 031406          103 PEHGGRDRHTCIAIRDVSKLKMILDKA----GISYTL  135 (160)
Q Consensus       103 ~~~~~~~~hi~f~v~d~~~~~~~l~~~----G~~~~~  135 (160)
                      ...|.+++||||.|+|+.+++++|+++    |+++..
T Consensus       257 ~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~  293 (398)
T PLN02875        257 HNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMP  293 (398)
T ss_pred             hcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCC
Confidence            234678999999999999999999999    999876

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=99.04  E-value=9.7e-10  Score=76.06  Aligned_cols=93  Identities=19%  Similarity=0.307  Sum_probs=60.3

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCC--CCC------CCCCCceE
Q 031406           40 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS--GRP------EHGGRDRH  111 (160)
Q Consensus        40 i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~--~~~------~~~~~~~h  111 (160)
                      |+|+.+.|+|++++.++|++.|||++......+..+..+..+.+++.+++|+.........  ...      ..+.++.+
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~YlEli~i~~~~~~~~~~~~~~~~~~~~~~g~~~   80 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDGYLELIAIDPEAPAPDRGRWFGLDRLAGGEGLYG   80 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSSEEEEEEES-HHHSTGGGT-TTTHHHHT--EEEE
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCceEEEEEeCCcccccccccceechhhcCCCCeEE
Confidence            6899999999999999998889999997766667677888888888899999975432221  111      14677889


Q ss_pred             EEEEeCCHHHHHHHHHHCCCe
Q 031406          112 TCIAIRDVSKLKMILDKAGIS  132 (160)
Q Consensus       112 i~f~v~d~~~~~~~l~~~G~~  132 (160)
                      +|+.++|+++..+++.+.|+.
T Consensus        81 ~~l~t~d~~~~~~~l~~~G~~  101 (175)
T PF13468_consen   81 WALRTDDIEAVAARLRAAGLD  101 (175)
T ss_dssp             EEEE-S-HHHHHHHHHTTT-E
T ss_pred             EEEecCCHHHHHHHHHhcCCC
Confidence            999999999999999999986

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.01  E-value=1.8e-09  Score=76.23  Aligned_cols=122  Identities=20%  Similarity=0.235  Sum_probs=80.2

Q ss_pred             CCCCCccCCCceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEE--EEEecCCCCCCCCC
Q 031406           25 GKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMI--HLMELPNPDPLSGR  102 (160)
Q Consensus        25 ~~~~~~~~~~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~--~l~~~~~~~~~~~~  102 (160)
                      -+|.+..+.+ +...+.+|+|.|.|+++|+.||.++||+++.+...    .++.+.+..++.+.  +|....+...    
T Consensus       136 ykF~l~~~~p-~s~pv~~V~l~VgdL~ks~kyw~~~lgM~ilekee----k~t~~~mgYgd~q~~LElt~~~~~id----  206 (299)
T KOG2943|consen  136 YKFYLIDRGP-QSDPVLQVMLNVGDLQKSIKYWEKLLGMKILEKEE----KYTRARMGYGDEQCVLELTYNYDVID----  206 (299)
T ss_pred             cEEEEeccCC-CCCCeEEEEEEehhHHHHHHHHHHHhCcchhhhhh----hhhhhhhccCCcceEEEEEeccCccc----
Confidence            3344444332 45678999999999999999999999999987522    22345566666653  4433332211    


Q ss_pred             CCCCCCceEEEEEe--CCHHHHHHHHHHCCCeEecc------C--CCceEEEEEcCCCCeEEEEe
Q 031406          103 PEHGGRDRHTCIAI--RDVSKLKMILDKAGISYTLS------K--SGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       103 ~~~~~~~~hi~f~v--~d~~~~~~~l~~~G~~~~~~------~--~g~~~~~~~DPdG~~ie~~~  157 (160)
                      ..  .+...++|.+  +++..+.+.++..+-.+..+      |  .....+.+.||||+.|.|+-
T Consensus       207 ~~--kg~griafaip~d~~~~l~e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVd  269 (299)
T KOG2943|consen  207 RA--KGFGRIAFAIPTDDLPKLQEAIKSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVD  269 (299)
T ss_pred             cc--ccceeEEEeccccccccHHHHHHHhccccccceeeccCCCcceeEEEEEECCCCceEEEec
Confidence            11  2234566665  48888888888876655322      2  23477888999999998864

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.86  E-value=3.6e-08  Score=71.07  Aligned_cols=98  Identities=22%  Similarity=0.254  Sum_probs=67.6

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCC-CCCCCCCCCceEEEEE
Q 031406           37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL-SGRPEHGGRDRHTCIA  115 (160)
Q Consensus        37 ~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~-~~~~~~~~~~~hi~f~  115 (160)
                      -..|.||.|.|.|++++.+||++.|||+.....+      ...|+..|+...++....-.... ........++..+.+.
T Consensus       166 ~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~~------~A~F~a~G~YHHHia~N~W~s~~~~~~~~~~~GLa~~~i~  239 (265)
T COG2514         166 GTIIGHVHLKVADLEEAEQFYEDVLGLEVTARGP------SALFLASGDYHHHLAANTWNSRGARPRNANASGLAWLEIH  239 (265)
T ss_pred             CcEEeEEEEEeCCHHHHHHHHHHhcCCeeeecCC------cceEEecCCcceeEEEeccccCCCCCCCCCCCCcceEEEE
Confidence            3478999999999999999999999999987633      34888999987777655432211 1122234556778888


Q ss_pred             eCCHHHHHHHHHHCCCeEeccCCCceEEEEEcCCCCeEEEE
Q 031406          116 IRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  156 (160)
Q Consensus       116 v~d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~ie~~  156 (160)
                      +++-..+.......                .||+|+.|.+.
T Consensus       240 ~~~~~~l~~~~~~~----------------~Dp~G~~i~~~  264 (265)
T COG2514         240 TPDPEKLDATGTRL----------------TDPWGIVIRVV  264 (265)
T ss_pred             cCCcccccccccce----------------ecCCCceEEEe
Confidence            87644333221111                89999999874

>PRK10148 hypothetical protein; Provisional

Probab=98.78  E-value=1.4e-06  Score=58.62  Aligned_cols=109  Identities=14%  Similarity=0.026  Sum_probs=72.6

Q ss_pred             EEEEeC-CHHHHHHHHHHhcCCEEeeecC---C-----------------CCCCcceEEEEeCCcEEEEEecCCCCCCCC
Q 031406           43 VGILCE-NLERSLEFYQNILGLEINEARP---H-----------------DKLPYRGAWLWVGAEMIHLMELPNPDPLSG  101 (160)
Q Consensus        43 v~l~v~-D~~~a~~Fy~~~lG~~~~~~~~---~-----------------~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~  101 (160)
                      ..|..+ |.++|.+||+++||.++.....   .                 +...+..+.+.+++..+.+.......    
T Consensus         5 pyL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~~lm~sD~~~~~----   80 (147)
T PRK10148          5 PYLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPSG----   80 (147)
T ss_pred             EEEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCEEEEEECCCCCc----
Confidence            455564 8999999999999998764310   0                 11223356677788766655432111    


Q ss_pred             CCCCCCCceEEEEEeCCHHH---HHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEee
Q 031406          102 RPEHGGRDRHTCIAIRDVSK---LKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       102 ~~~~~~~~~hi~f~v~d~~~---~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                       +..+. ..++++.++|.++   ++++| +.|.++..+.    ++.+...++||.|+.|-|...
T Consensus        81 -~~~~~-~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg~~~g~v~D~fGi~W~l~~~  141 (147)
T PRK10148         81 -KAHYS-GFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVV  141 (147)
T ss_pred             -CCCCC-eEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchhhccEEEECCCCCEEEEEec
Confidence             11112 3678888888877   55655 5788877653    577899999999999999764

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.73  E-value=7.2e-08  Score=70.82  Aligned_cols=103  Identities=16%  Similarity=0.167  Sum_probs=75.3

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCC--CCCcceEEEEeCCcEEEEEecCCCCC-CC--CCCCCCCCc
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KLPYRGAWLWVGAEMIHLMELPNPDP-LS--GRPEHGGRD  109 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~--~~~~~~~~~~~g~~~~~l~~~~~~~~-~~--~~~~~~~~~  109 (160)
                      -.+.+++||++.|.|...+..||+..|||+......-+  ...+...-+..|+..+.+.....+.. ..  .-+.+|.+.
T Consensus        13 g~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g~~vFv~~s~~~p~~~~~G~~l~~Hgdgv   92 (381)
T KOG0638|consen   13 GKFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQGKIVFVFNSAYNPDNSEYGDHLVKHGDGV   92 (381)
T ss_pred             cceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcCCEEEEEecCCCCCchhhhhhhhhcccch
Confidence            35789999999999999999999999999987644211  11222344555666666655544322 11  223567778


Q ss_pred             eEEEEEeCCHHHHHHHHHHCCCeEeccC
Q 031406          110 RHTCIAIRDVSKLKMILDKAGISYTLSK  137 (160)
Q Consensus       110 ~hi~f~v~d~~~~~~~l~~~G~~~~~~~  137 (160)
                      .-+||+|+|++++.+.+.++|+++..++
T Consensus        93 kdvafeVeD~da~~~~~va~Ga~v~~~p  120 (381)
T KOG0638|consen   93 KDVAFEVEDADAIFQEAVANGAKVVRPP  120 (381)
T ss_pred             hceEEEecchHHHHHHHHHcCCcccCCc
Confidence            8999999999999999999999997765

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.69  E-value=2.3e-06  Score=54.44  Aligned_cols=110  Identities=18%  Similarity=0.183  Sum_probs=63.6

Q ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeC--CcEEEEEecCCCCCCCCCCCCCCCceEEEEEeCC
Q 031406           41 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  118 (160)
Q Consensus        41 ~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g--~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d  118 (160)
                      .+-+|+|+|-+....||++.|||++.....      ..+++...  ...+.|-+.++.....  -...-.+.++.+.|++
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~~~erlvlEESP~~rtr~--V~G~KKl~~ivIkv~~   73 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQKEERLVLEESPSMRTRA--VEGPKKLNRIVIKVPN   73 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT--EEEEEEE--TTT-B----SSS-SEEEEEEEESS
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCCCceEEEEecCCcccccc--ccCcceeeEEEEEcCC
Confidence            466899999999999999999999886543      22555542  2355555555443211  1111237899999998


Q ss_pred             HHHHHHHHHHCCCeEecc--CCCceEEEEEcCCCCeEEEEeeC
Q 031406          119 VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       119 ~~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      ..+.- .|.++|.++...  ...++.|-..+|+|++|.+..-+
T Consensus        74 ~~EIe-~LLar~~~~~~l~kg~~gyAfe~vSPEgd~~llhaEd  115 (125)
T PF14506_consen   74 PKEIE-ALLARGAQYDRLYKGKNGYAFEAVSPEGDRFLLHAED  115 (125)
T ss_dssp             HHHHH-HHHHC-S--SEEEE-SSSEEEEEE-TT--EEEEE--S
T ss_pred             HHHHH-HHHhcccccceeEEcCCceEEEEECCCCCEEEEEEcC
Confidence            77765 455666665432  34578899999999999987543

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.64  E-value=1.1e-06  Score=67.82  Aligned_cols=118  Identities=16%  Similarity=0.155  Sum_probs=79.6

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCC--CcceEEEEeCCcEEEEEecCCCC--------------CC-CC-
Q 031406           40 VHHVGILCENLERSLEFYQNILGLEINEARPHDKL--PYRGAWLWVGAEMIHLMELPNPD--------------PL-SG-  101 (160)
Q Consensus        40 i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~--~~~~~~~~~g~~~~~l~~~~~~~--------------~~-~~-  101 (160)
                      ++||.++|.|...+..||+..|||+..........  ......+..|+..+.+.....+.              +. .. 
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g~i~fv~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSGDLVFLFTAPYSPKIGAGDDDPASTAPHPSFSSD   80 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeCCEEEEEeCCCCCccccccccccccccccccCcH
Confidence            58999999999999999999999998764432111  12234455577677666653221              00 00 


Q ss_pred             -----CCCCCCCceEEEEEeCCHHHHHHHHHHCCCeEeccCCC---------ceEEEEEcCCCCeEEEEe
Q 031406          102 -----RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSG---------RPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       102 -----~~~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~~g---------~~~~~~~DPdG~~ie~~~  157 (160)
                           ...+|.++.-++|.|+|++++++++.++|.....++.+         -...-+.-++|..+-|++
T Consensus        81 ~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVd  150 (398)
T PLN02875         81 AARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVS  150 (398)
T ss_pred             HHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEc
Confidence                 01457788899999999999999999999988654311         133345566666666665

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.56  E-value=3.7e-07  Score=60.52  Aligned_cols=119  Identities=11%  Similarity=0.045  Sum_probs=74.2

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEE
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  113 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~  113 (160)
                      ++...++.+|.+.++|.+++..|++ .|||+.......-    ....++-|+..+.|-..+..........+|.+..-++
T Consensus         4 P~g~~G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrsk----~v~l~rQG~I~~vln~ep~s~a~~~~~~HG~sv~aia   78 (139)
T PF14696_consen    4 PLGLDGFDFVEFAVPDAQALAQLFT-ALGFQPVARHRSK----DVTLYRQGDINFVLNSEPDSFAAEFAAQHGPSVCAIA   78 (139)
T ss_dssp             TT-EEEEEEEEEE-SSTTSCHHHHC-CCCEEEECCECCC----SEEEEEETTEEEEEEEESTSCHHHHHHHHSSEEEEEE
T ss_pred             CCCCCCeEEEEEecCCHHHHHHHHH-HhCcceEEecCCc----ceEEEEeCCEEEEEeCCCcchHHHHHHhcCCEEEEEE
Confidence            4567899999999999888888885 5999988754321    1233455777777755322111001123577789999


Q ss_pred             EEeCCHHHHHHHHHHCCCeEeccCC---CceEEEEEcCCCCeEEEEe
Q 031406          114 IAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       114 f~v~d~~~~~~~l~~~G~~~~~~~~---g~~~~~~~DPdG~~ie~~~  157 (160)
                      |.|+|.+++++++.++|.+....+.   .-..--++-++|.++-|++
T Consensus        79 frV~Da~~A~~rA~~~GA~~~~~~~~~~e~~~paI~g~G~sl~yfVd  125 (139)
T PF14696_consen   79 FRVDDAAAAYERAVALGAEPVQEPTGPGELNIPAIRGIGGSLHYFVD  125 (139)
T ss_dssp             EEES-HHHHHHHHHHTT--EEEEEEETT-BEEEEEE-CCC-EEEEEE
T ss_pred             EEeCCHHHHHHHHHHcCCcCcccCCCCCcEeeeeEEccCCCEEEEEe
Confidence            9999999999999999998866531   1233455556666665554

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.41  E-value=4.7e-07  Score=67.60  Aligned_cols=103  Identities=15%  Similarity=0.208  Sum_probs=71.8

Q ss_pred             CceeeeeeeEEEEe--CCHHHHHHHHHHhcCCEEeeecC--CCCCCcceEEEEe--CCcEEEEEecCCCCCCCCC---CC
Q 031406           34 DYGVVSVHHVGILC--ENLERSLEFYQNILGLEINEARP--HDKLPYRGAWLWV--GAEMIHLMELPNPDPLSGR---PE  104 (160)
Q Consensus        34 ~~~~~~i~hv~l~v--~D~~~a~~Fy~~~lG~~~~~~~~--~~~~~~~~~~~~~--g~~~~~l~~~~~~~~~~~~---~~  104 (160)
                      ...+..|+|++..|  ..++.+..||+++|||+......  .+....+.--+..  |..++.|-...+..+....   ..
T Consensus       162 ~~g~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~y  241 (363)
T COG3185         162 GVGLTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLREY  241 (363)
T ss_pred             ccCceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCCCcEEeecccCCCchhHHHHHHHHh
Confidence            33456889998876  89999999999999998775433  2222333333333  3335555555444332221   24


Q ss_pred             CCCCceEEEEEeCCHHHHHHHHHHCCCeEecc
Q 031406          105 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLS  136 (160)
Q Consensus       105 ~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~  136 (160)
                      .|.+..||+|.++|+.++.++++++|+++...
T Consensus       242 ~G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~i  273 (363)
T COG3185         242 RGEGIQHIAFGTDDIYATVAALRERGVKFLPI  273 (363)
T ss_pred             CCCcceEEEecccHHHHHHHHHHHcCCccCCC
Confidence            67889999999999999999999999998654

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=97.72  E-value=0.0016  Score=41.95  Aligned_cols=96  Identities=22%  Similarity=0.215  Sum_probs=59.7

Q ss_pred             CCHHHHHHHHHHhcCCEEee---ecCCC----CCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeCCHH
Q 031406           48 ENLERSLEFYQNILGLEINE---ARPHD----KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS  120 (160)
Q Consensus        48 ~D~~~a~~Fy~~~lG~~~~~---~~~~~----~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~~  120 (160)
                      .+.++|.+||.++||-....   ..+..    ....-.+.+.+++..+..........      .+. ..++++.++|.+
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g~~lm~~D~~~~~~------~~~-~~sl~i~~~~~e   83 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGGQKLMASDGGPDFP------FGN-NISLCIECDDEE   83 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETTEEEEEEEESTS----------T-TEEEEEEESSHH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECCeEEEEECCCCCCC------CCC-cEEEEEEcCCHH
Confidence            79999999999999853222   11211    11223456777888877766652211      112 367888888655


Q ss_pred             ---HHHHHHHHCCCeEeccCCCceEEEEEcCCCCeEEEE
Q 031406          121 ---KLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  156 (160)
Q Consensus       121 ---~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~ie~~  156 (160)
                         +++++|.+.|-      +..+...+.|--|..|.|+
T Consensus        84 e~~~~f~~Ls~gG~------~~~~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   84 EIDRIFDKLSEGGQ------WFSRYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHTTTE------TCCEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHcCCC------ccceeEEEEeCCCCEEEeC
Confidence               46788877665      3348899999999999874

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=97.71  E-value=0.001  Score=50.21  Aligned_cols=111  Identities=13%  Similarity=0.074  Sum_probs=72.7

Q ss_pred             CceeeeeeeEEEEeCCH-HHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCCCCCCCCCCCCCCCceE
Q 031406           34 DYGVVSVHHVGILCENL-ERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRH  111 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~-~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~~~~~~~~~~~~~~~~h  111 (160)
                      ++...++.+|.+.|.|. ++..+++. .|||+...+...     +.+.+.- |+..+.+...+..........+|.+..-
T Consensus        17 P~~~~GfeFvEf~~~d~~~~l~~l~~-~lGF~~~~~Hrs-----k~v~l~rQGdinlvvn~~~~s~a~~f~~~Hgps~~a   90 (363)
T COG3185          17 PEGTDGFEFVEFAVPDPQEALGALLG-QLGFTAVAKHRS-----KAVTLYRQGDINLVVNAEPDSFAAEFLDKHGPSACA   90 (363)
T ss_pred             CCCCCceeEEEEecCCHHHHHHHHHH-HhCccccccccc-----cceeEEEeCCEEEEEcCCCcchhhHHHHhcCCchhe
Confidence            33467999999999999 55555655 599997764332     2344444 5544444443322111111245666788


Q ss_pred             EEEEeCCHHHHHHHHHHCCCeEeccC-------------CCceEEEEEcCCC
Q 031406          112 TCIAIRDVSKLKMILDKAGISYTLSK-------------SGRPAIFTRDPDA  150 (160)
Q Consensus       112 i~f~v~d~~~~~~~l~~~G~~~~~~~-------------~g~~~~~~~DPdG  150 (160)
                      ++|.|+|...++++..+.|.+....+             .|+..+||.|.+|
T Consensus        91 ~a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~~  142 (363)
T COG3185          91 MAFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRYG  142 (363)
T ss_pred             eEEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccCC
Confidence            99999999999999999999553321             2566788888873

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=97.43  E-value=0.00013  Score=54.03  Aligned_cols=103  Identities=16%  Similarity=0.097  Sum_probs=69.4

Q ss_pred             ceeeeeeeEEEEeC--CHHHHHHHHHHhcCCEEeeecCCCCCCcc-----eEEEEeCCcEEEEEecCCCCCCCC------
Q 031406           35 YGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDKLPYR-----GAWLWVGAEMIHLMELPNPDPLSG------  101 (160)
Q Consensus        35 ~~~~~i~hv~l~v~--D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~-----~~~~~~g~~~~~l~~~~~~~~~~~------  101 (160)
                      +.+..++|++..++  .++.+.+||.+.|||..-+..++......     ...+...+..+.+...+...+...      
T Consensus       174 ~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vlan~~esi~mpinEp~~G~k~ksQIqe  253 (381)
T KOG0638|consen  174 GGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLANYEESIKMPINEPAPGKKKKSQIQE  253 (381)
T ss_pred             cceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHhcCCccEEEeccCCCCCCccHHHHHH
Confidence            56788999999998  67889999999999997766553332221     111222233333322222222111      


Q ss_pred             --CCCCCCCceEEEEEeCCHHHHHHHHHHCCCeEeccC
Q 031406          102 --RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK  137 (160)
Q Consensus       102 --~~~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~  137 (160)
                        ....|.++.||++.++|+=++.+.++++|.++..+|
T Consensus       254 yv~y~gG~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~P  291 (381)
T KOG0638|consen  254 YVEYHGGAGVQHIALNTEDIIEAIRGLRARGGEFLSPP  291 (381)
T ss_pred             HHHhcCCCceeeeeecchHHHHHHHHHHhcCCccccCC
Confidence              124577889999999999999999999999986543

>PF15067 FAM124: FAM124 family

Probab=97.22  E-value=0.0061  Score=43.54  Aligned_cols=101  Identities=21%  Similarity=0.326  Sum_probs=58.4

Q ss_pred             eeeeEEEEeC--CHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe---CCc--EEEEEecCCCCCCCCCCCCCCCceE
Q 031406           39 SVHHVGILCE--NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV---GAE--MIHLMELPNPDPLSGRPEHGGRDRH  111 (160)
Q Consensus        39 ~i~hv~l~v~--D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~---g~~--~~~l~~~~~~~~~~~~~~~~~~~~h  111 (160)
                      .+.-++|+|+  |++.+++||+-+|+-+......  ++    .++..   .+.  ++.|-..+  ......+.  . ..-
T Consensus       128 EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~--~F----C~F~lys~~~~~iQlsLK~lp--~~~~p~p~--e-sav  196 (236)
T PF15067_consen  128 EILRFTLYCSFDNYEDMVRFYELILQREPTQQKE--DF----CFFTLYSQPGLDIQLSLKQLP--PGMSPEPT--E-SAV  196 (236)
T ss_pred             cEEEEEEEecCCCHHHHHHHHHHHhccCcceeeC--Cc----EEEEEecCCCeEEEEEeccCC--CCCCcccc--c-ceE
Confidence            4566889998  9999999999999988765433  21    22222   232  33333331  11111111  2 245


Q ss_pred             EEEEeCCHHHHHHHHHHCCCeEeccCCCceEEEEEcCCCCeEEE
Q 031406          112 TCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEF  155 (160)
Q Consensus       112 i~f~v~d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~ie~  155 (160)
                      +.|.|.|+.+++--|- +..  .....+.  --..|||||.|-+
T Consensus       197 LqF~V~~igqLvpLLP-npc--~PIS~~r--WqT~D~DGNkILL  235 (236)
T PF15067_consen  197 LQFRVEDIGQLVPLLP-NPC--SPISETR--WQTEDYDGNKILL  235 (236)
T ss_pred             EEEEecchhhhcccCC-CCc--ccccCCc--ceeeCCCCCEecc
Confidence            8999999998874442 222  1111222  3457999998843

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=96.92  E-value=0.0035  Score=39.10  Aligned_cols=91  Identities=20%  Similarity=0.301  Sum_probs=44.3

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeC-
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  117 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~-  117 (160)
                      .+..+.|.|.| +++..||+++||-..                   ...+.+.+..++.-...+....+ +..+-|.|+ 
T Consensus         5 ~~e~i~LNV~d-~~~~~fy~~~f~~~~-------------------~~~l~f~ea~G~DL~~~~~~twD-Le~Lkf~V~~   63 (101)
T PF14507_consen    5 EFESIELNVPD-AKSQSFYQSIFGGQL-------------------PFFLTFQEAQGPDLTIENNETWD-LEMLKFQVPK   63 (101)
T ss_dssp             EE-EEEEEE-T--T---S--H---HHH-------------------TTTEEEEE---CCGSS-TTSBSS-EEEEEEEES-
T ss_pred             EEEEEEEeCCC-hhHHHHHHhccccCC-------------------CceEEEeeccCCccccCCCcEEe-eEEEEEEecC
Confidence            46789999999 889999999886221                   13455555555543322222222 467788887 


Q ss_pred             --CHHHHHHHHHHCCCeEeccCCCceEEEEEcCCCCeE
Q 031406          118 --DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL  153 (160)
Q Consensus       118 --d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~i  153 (160)
                        |+.++.+++.+.  .+ ..+...+.+.+.||.|..|
T Consensus        64 ~~Dl~~L~~~le~~--~~-fidKk~k~l~~~Dps~IEl   98 (101)
T PF14507_consen   64 DFDLAALKSHLEEQ--EF-FIDKKEKFLVTSDPSQIEL   98 (101)
T ss_dssp             S--HHHHHHHTTTS---E-E--TT-SEEEEE-TTS-EE
T ss_pred             cccHHHHHHHhccc--ce-EecCCceEEEEECCcceEE
Confidence              788888888773  22 2233467889999998654

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=96.56  E-value=0.014  Score=36.80  Aligned_cols=50  Identities=18%  Similarity=0.122  Sum_probs=38.6

Q ss_pred             eEEEEEeCCHHHHHHHHHH-CCCeEecc----CCCceEEEEEcCCC-CeEEEEeeC
Q 031406          110 RHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDA-NALEFTQVD  159 (160)
Q Consensus       110 ~hi~f~v~d~~~~~~~l~~-~G~~~~~~----~~g~~~~~~~DPdG-~~ie~~~~~  159 (160)
                      .|++|.|+|++++.+.+.+ .|+.....    ..+.+..++..++| ..||++++.
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~   56 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPL   56 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEES
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeC
Confidence            5999999999999999998 89876432    23445667788888 689999875

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=96.18  E-value=0.033  Score=37.53  Aligned_cols=54  Identities=15%  Similarity=0.153  Sum_probs=39.2

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEec
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMEL   93 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~   93 (160)
                      ++++||+|.|.|++++.+-+++ .|.+.......... -..+|+.. ++.++++...
T Consensus       114 rGfgHIci~V~di~sac~~lke-kGV~f~Kk~~dGk~-K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  114 RGFGHICIEVDDINSACERLKE-KGVRFKKKLKDGKM-KPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             CccceEEEEeCCHHHHHHHHHH-hCceeeecCCCccc-cceeEEECCCCCeEEEeec
Confidence            6899999999999999999987 99997665544443 23455554 4556766543

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=95.57  E-value=0.072  Score=34.95  Aligned_cols=54  Identities=15%  Similarity=0.231  Sum_probs=38.1

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEe
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME   92 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~   92 (160)
                      .++.|+++.|.|++++.+..++ .|.+..........+.+..++.. +|..++|++
T Consensus        86 ~g~~hia~~v~d~d~~~~~l~~-~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e  140 (142)
T cd08353          86 LGLRRVMFAVDDIDARVARLRK-HGAELVGEVVQYENSYRLCYIRGPEGILIELAE  140 (142)
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCceeCCceecCCCeEEEEEECCCCCEEEeee
Confidence            4689999999999999999987 89887653222223344555554 455677765

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=94.65  E-value=0.34  Score=31.68  Aligned_cols=59  Identities=12%  Similarity=0.017  Sum_probs=43.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCCCC
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPD   97 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~~~   97 (160)
                      .++.|+.+.|+|++++.+-.+. .|.++.........+.+.+++.. +|..++|++..+..
T Consensus        68 ~g~~hia~~V~Dvda~~~~l~~-~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~~~~  127 (136)
T cd08342          68 DGVCDVAFRVDDAAAAYERAVA-RGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRKGYK  127 (136)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-cCCeEccCceecCCeEEEEEEeccCCcEEEEEecCCCC
Confidence            4678999999999999999876 89998753332244445666665 57789999977654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>PLN02367 lactoylglutathione lyase

Probab=94.58  E-value=0.27  Score=35.67  Aligned_cols=57  Identities=21%  Similarity=0.340  Sum_probs=41.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCCC
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP   96 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~~   96 (160)
                      .+++|+++.|.|++++.+.+++ .|.++... +........+|+.. +|..++|++...-
T Consensus       168 ~G~~HIaf~VdDVdaa~erL~a-~Gv~~v~~-P~~g~~~riaFIkDPDGn~IEL~e~~~~  225 (233)
T PLN02367        168 RGFGHIGITVDDVYKACERFEE-LGVEFVKK-PNDGKMKGIAFIKDPDGYWIEIFDLKTI  225 (233)
T ss_pred             CCceEEEEEcCCHHHHHHHHHH-CCCEEEeC-CccCCceEEEEEECCCCCEEEEEecccc
Confidence            4899999999999999999976 99998753 22222223456655 5778999886543

>PF13670 PepSY_2: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site

Probab=94.08  E-value=0.27  Score=29.51  Aligned_cols=40  Identities=18%  Similarity=0.213  Sum_probs=33.8

Q ss_pred             CHHHHHHHHHHCCCeEecc---CCCceEEEEEcCCCCeEEEEe
Q 031406          118 DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       118 d~~~~~~~l~~~G~~~~~~---~~g~~~~~~~DPdG~~ie~~~  157 (160)
                      ..+++.+.+.+.|+++..-   .++++.+...|.||+.+|+.-
T Consensus        30 ~~~~~~~~l~~~G~~v~~ve~~~~g~yev~~~~~dG~~~ev~v   72 (83)
T PF13670_consen   30 SIEQAVAKLEAQGYQVREVEFDDDGCYEVEARDKDGKKVEVYV   72 (83)
T ss_pred             CHHHHHHHHHhcCCceEEEEEcCCCEEEEEEEECCCCEEEEEE
Confidence            6889999999999977542   456889999999999999864

This is family M4 in the peptidase classification.

>PRK11478 putative lyase; Provisional

Probab=94.05  E-value=0.51  Score=30.13  Aligned_cols=54  Identities=9%  Similarity=0.174  Sum_probs=35.1

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEe
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME   92 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~   92 (160)
                      .++.|+++.|.|++++.+-..+ .|.++......+..+.+.+|+.. +|..+++++
T Consensus        74 ~g~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         74 CGLRHLAFSVDDIDAAVAHLES-HNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             CceeEEEEEeCCHHHHHHHHHH-cCCeeeccccCCCCCCEEEEEECCCCCEEEEEe
Confidence            4678999999999999998876 89987542221222233444444 455666654

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=93.94  E-value=0.36  Score=30.57  Aligned_cols=30  Identities=13%  Similarity=0.398  Sum_probs=25.7

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeee
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEA   68 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~   68 (160)
                      .++.|+++.|.|++++.+..++ .|.++...
T Consensus        71 ~g~~h~~f~v~d~~~~~~~l~~-~G~~~~~~  100 (128)
T cd07249          71 EGLHHIAFEVDDIDAALARLKA-QGVRLLQE  100 (128)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCeeecc
Confidence            5689999999999999999977 79987653

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=93.66  E-value=0.73  Score=28.89  Aligned_cols=50  Identities=18%  Similarity=0.071  Sum_probs=35.1

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-CCCeEeccC---C-CceEEEEEcCCCCeEEEEe
Q 031406          108 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK---S-GRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       108 ~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~---~-g~~~~~~~DPdG~~ie~~~  157 (160)
                      ++.|+++.|.|++++.+.+.+ .|+.+....   . ..+.+.+..+++..+++..
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~   57 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFS   57 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEE
Confidence            368999999999999988875 799886432   1 1223444455677777764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=93.46  E-value=0.55  Score=31.74  Aligned_cols=50  Identities=10%  Similarity=0.096  Sum_probs=34.5

Q ss_pred             ceEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEEc-CCCCeEEEEee
Q 031406          109 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRD-PDANALEFTQV  158 (160)
Q Consensus       109 ~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~D-PdG~~ie~~~~  158 (160)
                      ++|+++.|.|+++..+...+ .|.++.....+...++..+ .++..+++.+.
T Consensus         2 l~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   53 (157)
T cd08347           2 LHGVTLTVRDPEATAAFLTDVLGFREVGEEGDRVRLEEGGGGPGAVVDVLEE   53 (157)
T ss_pred             cccEEEEeCCHHHHHHHHHHhcCCEEEeeeCCEEEEEecCCCCCCEEEEEeC
Confidence            68999999999999988866 5988765443322222222 24788888764

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=93.12  E-value=0.76  Score=31.15  Aligned_cols=52  Identities=13%  Similarity=0.153  Sum_probs=36.5

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-CCCeEecc-----CC------------C-----ceEEEEEcCCCCeEEEEeeC
Q 031406          108 RDRHTCIAIRDVSKLKMILDK-AGISYTLS-----KS------------G-----RPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       108 ~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~-----~~------------g-----~~~~~~~DPdG~~ie~~~~~  159 (160)
                      ++.|+++.|.|++++.+...+ .|.++...     ..            +     .+..++..++|..||+++++
T Consensus         4 ~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~   78 (162)
T TIGR03645         4 TFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFK   78 (162)
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEecc
Confidence            368999999999999988866 68876421     00            1     12345555678889999864

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.52  E-value=0.82  Score=29.09  Aligned_cols=50  Identities=16%  Similarity=0.202  Sum_probs=33.6

Q ss_pred             ceEEEEEeCCHHHHHHHHHHC----CCeEeccCCCceEEEEEcCCCCeEEEEeeC
Q 031406          109 DRHTCIAIRDVSKLKMILDKA----GISYTLSKSGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       109 ~~hi~f~v~d~~~~~~~l~~~----G~~~~~~~~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      +.|+.+.|.|++++.+.+.+.    |.+....... ...|+...++..+++.+.+
T Consensus         2 i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~-~~~~~~~~~~~~i~l~~~~   55 (128)
T cd07242           2 IHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED-GRSWRAGDGGTYLVLQQAD   55 (128)
T ss_pred             CceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc-CceEEecCCceEEEEEecc
Confidence            589999999999998888775    8887654322 2233333455677776543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=92.26  E-value=1.2  Score=31.10  Aligned_cols=56  Identities=21%  Similarity=0.356  Sum_probs=39.2

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCC
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN   95 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~   95 (160)
                      .++.|+++.|.|++++.+.+++ .|+++... +......+..|+.. +|..++|++...
T Consensus       120 ~G~~Hlaf~V~Dvd~~~~~L~~-~Gv~v~~~-p~~~~~~~~~fi~DPdG~~IEl~e~~~  176 (185)
T PLN03042        120 RGFGHIGITVDDVYKACERFEK-LGVEFVKK-PDDGKMKGLAFIKDPDGYWIEIFDLKR  176 (185)
T ss_pred             CCccEEEEEcCCHHHHHHHHHH-CCCeEEeC-CccCCceeEEEEECCCCCEEEEEECCC
Confidence            4799999999999999999987 99987642 21111223345444 566888888654

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=92.16  E-value=0.83  Score=27.54  Aligned_cols=48  Identities=15%  Similarity=0.214  Sum_probs=36.1

Q ss_pred             EEEEEeCCHHHHHHHHHH-CCCeEeccCC--CceEEEEEcCCCCeEEEEeeC
Q 031406          111 HTCIAIRDVSKLKMILDK-AGISYTLSKS--GRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       111 hi~f~v~d~~~~~~~l~~-~G~~~~~~~~--g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |+.+.+.|++++.+.+.+ .|.+......  .....++.++ +..|+|.+.+
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~   51 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNGGAEFAVLGLG-GTRLELFEGD   51 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccCCEEEEEEecC-CceEEEecCC
Confidence            788999999999999987 8998876553  2445555554 7888887754

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=92.11  E-value=1.4  Score=27.72  Aligned_cols=50  Identities=18%  Similarity=0.239  Sum_probs=35.7

Q ss_pred             ceEEEEEeCCHHHHHHHHHH-CCCeEeccC---C--CceEEEEEcC---CCCeEEEEee
Q 031406          109 DRHTCIAIRDVSKLKMILDK-AGISYTLSK---S--GRPAIFTRDP---DANALEFTQV  158 (160)
Q Consensus       109 ~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~---~--g~~~~~~~DP---dG~~ie~~~~  158 (160)
                      +.|+++.|+|++++.+...+ .|++.....   .  +....++.+.   .|..+++.+.
T Consensus         2 i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   60 (126)
T cd08346           2 LHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEW   60 (126)
T ss_pred             cccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEec
Confidence            57999999999999988876 699875432   1  1334555554   5678888764

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.04  E-value=0.86  Score=27.82  Aligned_cols=50  Identities=12%  Similarity=0.149  Sum_probs=33.5

Q ss_pred             ceEEEEEeCCHHHHHHHHH-HCCCeEeccCC-CceEEEEEcCCCCeEEEEee
Q 031406          109 DRHTCIAIRDVSKLKMILD-KAGISYTLSKS-GRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       109 ~~hi~f~v~d~~~~~~~l~-~~G~~~~~~~~-g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +.|+++.|+|++++.+... ..|.+...... .....++...++..+++...
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~i~l~~~   52 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLFPGAWLYAGDGPQLHLIEE   52 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCCCceEEEeCCCcEEEEEec
Confidence            3699999999999988886 56887654332 12334555555556777654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>COG3865 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=91.98  E-value=2.6  Score=28.19  Aligned_cols=107  Identities=12%  Similarity=0.082  Sum_probs=59.5

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCC-EEe--eecCCCC-----CCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCce
Q 031406           39 SVHHVGILCENLERSLEFYQNILGL-EIN--EARPHDK-----LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDR  110 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~-~~~--~~~~~~~-----~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~  110 (160)
                      ++.-.-..-.+.++|..||.++|-= ++.  .+.+.+.     .....+-+.++|..+..+........    ..... .
T Consensus         5 kit~~L~F~~~AeeA~~fY~s~FpdS~i~~i~r~p~~~~~g~~G~Vl~a~F~l~g~~f~~ld~g~~~~f----~fneA-~   79 (151)
T COG3865           5 KITPFLWFDGNAEEAMNFYLSTFPDSKIIGITRYPEGEPGGKEGKVLVAEFTLNGQSFMALDGGPNTSF----KFNEA-F   79 (151)
T ss_pred             cceeEEEECCcHHHHHHHHHHhCCcceeeeeeecCCCCCCCCCccEEEEEEEECCeEEEEEcCCCCcCC----CcCcc-E
Confidence            3333334448999999999999843 222  1122111     11223456667765555444322111    11111 3


Q ss_pred             EEEEEeCC---HHHHHHHHHHCCCeEeccCCCceEEEEEcCCCCeEEEE
Q 031406          111 HTCIAIRD---VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  156 (160)
Q Consensus       111 hi~f~v~d---~~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~ie~~  156 (160)
                      .+.+.++|   +|.+...|.+.|.      ......+++|-.|.-|.|.
T Consensus        80 S~~v~~~~q~E~Drlwnal~~~g~------e~~~cgW~kDKfGVSWQi~  122 (151)
T COG3865          80 SFQVACDDQEEIDRLWNALSDNGG------EAEACGWLKDKFGVSWQIV  122 (151)
T ss_pred             EEEEEcCCHHHHHHHHHHHhccCc------chhcceeEecccCcEEEEc
Confidence            45566664   5567788888776      3345678888888877664

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=91.97  E-value=0.94  Score=28.59  Aligned_cols=46  Identities=15%  Similarity=0.248  Sum_probs=30.2

Q ss_pred             eEEEEEeCCHHHHHHHHHHCCCeEeccCCCceEEEEEcCCCCeEEE
Q 031406          110 RHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEF  155 (160)
Q Consensus       110 ~hi~f~v~d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~ie~  155 (160)
                      .|+.+.|+|++++.+.....|.++.........+.+..++|..+.+
T Consensus         2 ~~i~l~V~D~~~a~~FY~~LGf~~~~~~~~~~~~~~~~~~~~~l~l   47 (122)
T cd07235           2 DAVGIVVADMAKSLDFYRRLGFDFPEEADDEPHVEAVLPGGVRLAW   47 (122)
T ss_pred             ceEEEEeccHHHHHHHHHHhCceecCCcCCCCcEEEEeCCCEEEEE
Confidence            6899999999999988877898875433222233444444444433

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>PRK10291 glyoxalase I; Provisional

Probab=91.63  E-value=2.1  Score=27.38  Aligned_cols=57  Identities=16%  Similarity=0.132  Sum_probs=38.2

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeec-CCCCCCcceEEEEe-CCcEEEEEecCC
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEAR-PHDKLPYRGAWLWV-GAEMIHLMELPN   95 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~-~~~~~~~~~~~~~~-g~~~~~l~~~~~   95 (160)
                      .++.|+++.|.|++++.+-.++ .|.++.... +........+++.. ++..++|++...
T Consensus        64 ~~~~hlaf~V~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~  122 (129)
T PRK10291         64 TAYGHIALSVDNAAEACEKIRQ-NGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  122 (129)
T ss_pred             CCeeEEEEEeCCHHHHHHHHHH-cCCccccCCcccCCCceEEEEEECCCCCEEEEEEccc
Confidence            3688999999999999998876 898766422 11121122344444 577888888653

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=91.52  E-value=1.9  Score=27.72  Aligned_cols=50  Identities=12%  Similarity=0.167  Sum_probs=34.7

Q ss_pred             ceEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEEcC--CCCeEEEEee
Q 031406          109 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDP--DANALEFTQV  158 (160)
Q Consensus       109 ~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DP--dG~~ie~~~~  158 (160)
                      +.|+.+.|.|++++.+...+ .|.++..........++..+  .+..+.+.+.
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   54 (134)
T cd08348           2 LSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPLGGLVFLSRDPDEHHQIALITG   54 (134)
T ss_pred             eeEEEEEecCHHHHHHHHHHhcCCEEEeeccCCcEEEEEecCCCceEEEEEec
Confidence            57999999999999988876 79988654432234454433  3456776654

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=91.05  E-value=1.9  Score=27.21  Aligned_cols=48  Identities=6%  Similarity=0.042  Sum_probs=33.5

Q ss_pred             ceEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEEcCC-CCeEEEEee
Q 031406          109 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPD-ANALEFTQV  158 (160)
Q Consensus       109 ~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPd-G~~ie~~~~  158 (160)
                      +.|+.+.|+|++++.+.... .|.++....+  ..+++...+ +..+.+.+.
T Consensus         3 i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~--~~~~l~~~~~~~~l~l~~~   52 (125)
T cd07255           3 IGAVTLRVADLERSLAFYQDVLGLEVLERTD--STAVLGTGGKRPLLVLEED   52 (125)
T ss_pred             EEEEEEEECCHHHHHHHHHhccCcEEEEcCC--CEEEEecCCCeEEEEEEeC
Confidence            68999999999999988876 6998876532  234444443 456666543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=90.54  E-value=2.7  Score=26.28  Aligned_cols=50  Identities=20%  Similarity=0.227  Sum_probs=33.0

Q ss_pred             ceEEEEEeCCHHHHHHHHHH-CCCeEecc---C-CCceEEEEEcCCCCeEEEEee
Q 031406          109 DRHTCIAIRDVSKLKMILDK-AGISYTLS---K-SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       109 ~~hi~f~v~d~~~~~~~l~~-~G~~~~~~---~-~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +.|+++.|+|++++.+...+ .|.++...   + .+....++.-.+|..+++++.
T Consensus         2 ~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   56 (125)
T cd07241           2 IEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTR   56 (125)
T ss_pred             ceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcC
Confidence            57999999999999888766 58876432   1 222233343335677888753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=89.94  E-value=1.6  Score=26.70  Aligned_cols=52  Identities=19%  Similarity=0.206  Sum_probs=33.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEE
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHL   90 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l   90 (160)
                      .+..|+.+.|.|++++.+.+.+ +|.+..........+....++.. +|..+++
T Consensus        55 ~~~~~~~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~ie~  107 (108)
T PF12681_consen   55 GGGFHLCFEVEDVDALYERLKE-LGAEIVTEPRDDPWGQRSFYFIDPDGNRIEF  107 (108)
T ss_dssp             SSEEEEEEEESHHHHHHHHHHH-TTSEEEEEEEEETTSEEEEEEE-TTS-EEEE
T ss_pred             CceeEEEEEEcCHHHHHHHHHH-CCCeEeeCCEEcCCCeEEEEEECCCCCEEEe
Confidence            4678999999999999999987 89987653322222333444443 3445554

...

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=89.78  E-value=2.8  Score=26.51  Aligned_cols=47  Identities=11%  Similarity=0.066  Sum_probs=31.0

Q ss_pred             ceEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEEcC-CCCeEEEE
Q 031406          109 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDP-DANALEFT  156 (160)
Q Consensus       109 ~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DP-dG~~ie~~  156 (160)
                      +.|+++.|.|++++.+.... .|.+......+. ..++..+ .++.+.+.
T Consensus         3 l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~-~~~~~~~~~~~~~~l~   51 (120)
T cd07252           3 LGYLGVESSDLDAWRRFATDVLGLQVGDRPEDG-ALYLRMDDRAWRIAVH   51 (120)
T ss_pred             ccEEEEEeCCHHHHHHHHHhccCceeccCCCCC-eEEEEccCCceEEEEE
Confidence            57999999999999988866 699876543222 3344433 33445544

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=89.41  E-value=1.8  Score=27.30  Aligned_cols=29  Identities=24%  Similarity=0.529  Sum_probs=24.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEee
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINE   67 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~   67 (160)
                      .++.|+++.|.|++++.+..+. .|.++..
T Consensus        71 ~g~~~i~~~v~di~~~~~~l~~-~G~~~~~   99 (128)
T TIGR03081        71 GGIHHIAIEVDDIEAALETLKE-KGVRLID   99 (128)
T ss_pred             CceEEEEEEcCCHHHHHHHHHH-CCCcccC
Confidence            4678999999999999998876 7888764

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=89.04  E-value=2.3  Score=26.23  Aligned_cols=30  Identities=13%  Similarity=0.243  Sum_probs=25.6

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeee
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEA   68 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~   68 (160)
                      .++.|+.+.|.|++++.+...+ .|.+....
T Consensus        66 ~~~~~~~~~v~di~~~~~~l~~-~g~~~~~~   95 (119)
T cd07263          66 GGTPGLVLATDDIDATYEELKA-RGVEFSEE   95 (119)
T ss_pred             CCceEEEEEehHHHHHHHHHHh-CCCEEeec
Confidence            4678999999999999999876 89887753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=88.96  E-value=3.1  Score=25.97  Aligned_cols=49  Identities=12%  Similarity=0.124  Sum_probs=30.5

Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEE
Q 031406           42 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLM   91 (160)
Q Consensus        42 hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~   91 (160)
                      |+.+.|.|+++..+...+ .|.++.........+.+..++.. +|..++++
T Consensus        69 ~~~~~v~did~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~  118 (119)
T cd08359          69 ILNFEVDDVDAEYERLKA-EGLPIVLPLRDEPWGQRHFIVRDPNGVLIDIV  118 (119)
T ss_pred             EEEEEECCHHHHHHHHHh-cCCCeeeccccCCCcceEEEEECCCCCEEEEE
Confidence            899999999999999987 78876543222222333344443 34455554

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=88.08  E-value=3.4  Score=25.71  Aligned_cols=29  Identities=14%  Similarity=0.382  Sum_probs=25.1

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeee
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEA   68 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~   68 (160)
                      ++.|+.+.|.|++++.+-... .|+++...
T Consensus        70 ~~~~i~~~v~did~~~~~l~~-~G~~~~~~   98 (121)
T cd07233          70 GFGHLAFAVDDVYAACERLEE-MGVEVTKP   98 (121)
T ss_pred             CeEEEEEEeCCHHHHHHHHHH-CCCEEeeC
Confidence            678999999999999988876 89987753

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=87.95  E-value=3.6  Score=25.89  Aligned_cols=47  Identities=13%  Similarity=0.227  Sum_probs=31.2

Q ss_pred             eEEEEEeCCHHHHHHHHHH----CCCeEeccCCCceEEEEEcC-CCCeEEEEe
Q 031406          110 RHTCIAIRDVSKLKMILDK----AGISYTLSKSGRPAIFTRDP-DANALEFTQ  157 (160)
Q Consensus       110 ~hi~f~v~d~~~~~~~l~~----~G~~~~~~~~g~~~~~~~DP-dG~~ie~~~  157 (160)
                      .|+.+.|.|++++.+...+    .|.+......+.+ +.+..+ .+..+.+..
T Consensus         2 ~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~~~~-~~~~~~~~~~~~~l~~   53 (123)
T cd07262           2 DHVTLGVNDLERARAFYDAVLAPLGIKRVMEDGPGA-VGYGKGGGGPDFWVTK   53 (123)
T ss_pred             cEEEEecCcHHHHHHHHHHHHhhcCceEEeecCCce-eEeccCCCCceEEEec
Confidence            6999999999999888876    5888765432222 334444 355666654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=87.61  E-value=3.2  Score=27.45  Aligned_cols=56  Identities=14%  Similarity=0.064  Sum_probs=37.6

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecC-CCCCCcceEEEEe-CCcEEEEEecC
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARP-HDKLPYRGAWLWV-GAEMIHLMELP   94 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~-~~~~~~~~~~~~~-g~~~~~l~~~~   94 (160)
                      .++.|+.+.|.|++++.+...+ .|.++..... .+.......++.. .|..++|++..
T Consensus        85 ~g~~hi~f~v~dld~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  142 (150)
T TIGR00068        85 NGFGHIAIGVDDVYKACERVRA-LGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRK  142 (150)
T ss_pred             CceeEEEEecCCHHHHHHHHHH-cCCccccCCcccCCCceEEEEEECCCCCEEEEEECC
Confidence            3688999999999999999977 8987764321 1111222344443 56688887755

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=87.31  E-value=4  Score=25.41  Aligned_cols=30  Identities=13%  Similarity=0.205  Sum_probs=25.1

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-CCCeEeccC
Q 031406          108 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK  137 (160)
Q Consensus       108 ~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~  137 (160)
                      ++.|+.+.|+|+++..+...+ .|.+.....
T Consensus         3 ~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~   33 (125)
T cd07253           3 RIDHVVLTVADIEATLDFYTRVLGMEVVRFG   33 (125)
T ss_pred             ccceEEEEecCHHHHHHHHHHHhCceeeccc
Confidence            368999999999999988877 698886544

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=86.74  E-value=4.1  Score=25.31  Aligned_cols=28  Identities=11%  Similarity=0.204  Sum_probs=24.1

Q ss_pred             ceEEEEEeCCHHHHHHHHHHCCCeEecc
Q 031406          109 DRHTCIAIRDVSKLKMILDKAGISYTLS  136 (160)
Q Consensus       109 ~~hi~f~v~d~~~~~~~l~~~G~~~~~~  136 (160)
                      +.|+++.|.|++++.+.....|.++...
T Consensus         3 i~hv~l~v~d~~~s~~FY~~lG~~~~~~   30 (112)
T cd08344           3 IDHFALEVPDLEVARRFYEAFGLDVREE   30 (112)
T ss_pred             eeEEEEecCCHHHHHHHHHHhCCcEEee
Confidence            6899999999999988888789988643

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PF06185 YecM: YecM protein; InterPro: IPR010393 This family consists of several bacterial YecM proteins of unknown function

Probab=86.47  E-value=9.1  Score=26.81  Aligned_cols=77  Identities=19%  Similarity=0.145  Sum_probs=42.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeec-CCCCCCcceEE----EEeCCcEEEEEecCCCCCCCCCCCCCCCceEE
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEAR-PHDKLPYRGAW----LWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  112 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~-~~~~~~~~~~~----~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi  112 (160)
                      -.++||+++|++.+.+.+|-+.++..-..-.. ..++.++...-    +.+++..+.+++.+-+... ..|  -.+.-||
T Consensus        33 ~~~DHialRvn~~~~A~~~~~~l~~~G~llSen~INGRPI~l~~L~qPL~~~~~~I~~vELP~P~~K-~Yp--~eGWEHI  109 (185)
T PF06185_consen   33 YEIDHIALRVNSNETAERWKQALLQCGELLSENMINGRPICLFKLNQPLQFGGWSIDCVELPYPKDK-RYP--QEGWEHI  109 (185)
T ss_dssp             -EEEEEEEE-S-HHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEE---SS---S--S-EEEEE
T ss_pred             cCCcEEEEecCCHHHHHHHHHHHHHhChhhhhceeCCeeEEEEEcCCchhcCCeeEEEEEeCCCCCC-CCC--CCCceEE
Confidence            36799999999999999999988766433221 11222221111    3446778888877644331 122  2456899


Q ss_pred             EEEeC
Q 031406          113 CIAIR  117 (160)
Q Consensus       113 ~f~v~  117 (160)
                      -|.++
T Consensus       110 E~Vip  114 (185)
T PF06185_consen  110 EFVIP  114 (185)
T ss_dssp             EEE--
T ss_pred             EEEec
Confidence            99987

; PDB: 1K4N_A.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=86.43  E-value=5.7  Score=24.47  Aligned_cols=52  Identities=12%  Similarity=0.191  Sum_probs=32.5

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEe
Q 031406           40 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME   92 (160)
Q Consensus        40 i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~   92 (160)
                      ..|+.+.|.|++++.+-++. .|.++.........+.+..++.. +|..+++.+
T Consensus        58 ~~~i~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DP~Gn~i~~~~  110 (112)
T cd07238          58 VPDLSIEVDDVDAALARAVA-AGFAIVYGPTDEPWGVRRFFVRDPFGKLVNILT  110 (112)
T ss_pred             CCEEEEEeCCHHHHHHHHHh-cCCeEecCCccCCCceEEEEEECCCCCEEEEEE
Confidence            46899999999999998876 88887653222222323333333 345566553

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=86.42  E-value=4.9  Score=24.81  Aligned_cols=38  Identities=8%  Similarity=0.130  Sum_probs=28.8

Q ss_pred             ceEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEEcC
Q 031406          109 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDP  148 (160)
Q Consensus       109 ~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DP  148 (160)
                      +.|+.+.|.|+++..+...+ .|.++.....  ...++..+
T Consensus         3 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~--~~~~~~~~   41 (117)
T cd07240           3 IAYAELEVPDLERALEFYTDVLGLTVLDRDA--GSVYLRCS   41 (117)
T ss_pred             eeEEEEecCCHHHHHHHHHhccCcEEEeecC--CeEEEecC
Confidence            68999999999999988888 7988876542  23455544

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=86.21  E-value=3.7  Score=28.70  Aligned_cols=51  Identities=16%  Similarity=0.133  Sum_probs=37.2

Q ss_pred             ceEEEEEeC--CHHHHHHHHHH-CCCeEeccC------CCceEEEEEcCCC-CeEEEEeeC
Q 031406          109 DRHTCIAIR--DVSKLKMILDK-AGISYTLSK------SGRPAIFTRDPDA-NALEFTQVD  159 (160)
Q Consensus       109 ~~hi~f~v~--d~~~~~~~l~~-~G~~~~~~~------~g~~~~~~~DPdG-~~ie~~~~~  159 (160)
                      +.|+++.|+  |++++.+...+ .|.+.....      .+.+...+..|+| ..+++.++.
T Consensus         4 iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~   64 (191)
T cd07250           4 IDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPA   64 (191)
T ss_pred             eeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCC
Confidence            689999999  99999988755 788775421      2345667778765 567887653

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=85.48  E-value=4.7  Score=25.08  Aligned_cols=49  Identities=16%  Similarity=0.153  Sum_probs=32.0

Q ss_pred             ceEEEEEeCCHHHHHHHHHH-CCCeEeccCC-----CceEEEEEcCCCCeEEEEe
Q 031406          109 DRHTCIAIRDVSKLKMILDK-AGISYTLSKS-----GRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       109 ~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~-----g~~~~~~~DPdG~~ie~~~  157 (160)
                      +.|+++.|.|+++..+...+ .|.++.....     +....++..-.+..+++..
T Consensus         2 l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   56 (128)
T PF00903_consen    2 LDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEGHIELFL   56 (128)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSSCEEEEE
T ss_pred             eEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccccceeeee
Confidence            68999999999999888877 6988865432     2223333333444455544

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=83.89  E-value=6.7  Score=25.30  Aligned_cols=56  Identities=5%  Similarity=0.001  Sum_probs=34.6

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHh--cCCEEeeecCCCCC-CcceEEEEe-CCcEEEEEec
Q 031406           38 VSVHHVGILCENLERSLEFYQNI--LGLEINEARPHDKL-PYRGAWLWV-GAEMIHLMEL   93 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~--lG~~~~~~~~~~~~-~~~~~~~~~-g~~~~~l~~~   93 (160)
                      .+++|+++.|.|+++..+++..+  .|+++......... .....|+.. +|..+++...
T Consensus        61 ~g~~hiaf~v~d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~  120 (134)
T cd08360          61 AGFHHAAFEVGDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGAD  120 (134)
T ss_pred             CcceEEEEEeCCHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEcc
Confidence            57899999999999999877776  57765432111111 111233443 5667777753

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=82.58  E-value=10  Score=24.68  Aligned_cols=55  Identities=11%  Similarity=0.140  Sum_probs=33.3

Q ss_pred             eeeeEEEEeC--CHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecC
Q 031406           39 SVHHVGILCE--NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP   94 (160)
Q Consensus        39 ~i~hv~l~v~--D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~   94 (160)
                      ++.|+++.+.  |++++.+...+ .|.++...........+..++.. +|..+++....
T Consensus        63 ~~~hiaf~v~~~dv~~~~~~l~~-~G~~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         63 SYTHIAFSIEEEDFDHWYQRLKE-NDVNILPGRERDERDKKSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             CeeEEEEEecHHHHHHHHHHHHH-CCceEcCCccccCCCceEEEEECCCCCEEEEEeCC
Confidence            5789999987  89999888876 78886532221111223344443 34556665543

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=82.52  E-value=9.1  Score=24.65  Aligned_cols=28  Identities=7%  Similarity=0.010  Sum_probs=22.5

Q ss_pred             ceEEEEEeCCHHHHHHHHHH-CCCeEecc
Q 031406          109 DRHTCIAIRDVSKLKMILDK-AGISYTLS  136 (160)
Q Consensus       109 ~~hi~f~v~d~~~~~~~l~~-~G~~~~~~  136 (160)
                      +.|+++.|+|++++.+...+ .|.++...
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~   29 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVL   29 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEecc
Confidence            36999999999999888876 58877543

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=82.28  E-value=9.2  Score=23.50  Aligned_cols=29  Identities=7%  Similarity=0.004  Sum_probs=24.0

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeee
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEA   68 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~   68 (160)
                      ...|+.+.|+|++++.+-... .|.++...
T Consensus        61 ~~~~~~f~v~di~~~~~~l~~-~g~~~~~~   89 (114)
T cd07247          61 PGWLVYFAVDDVDAAAARVEA-AGGKVLVP   89 (114)
T ss_pred             CeEEEEEEeCCHHHHHHHHHH-CCCEEEeC
Confidence            457899999999999998876 79887653

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=81.60  E-value=10  Score=23.64  Aligned_cols=26  Identities=4%  Similarity=0.162  Sum_probs=21.7

Q ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEee
Q 031406           41 HHVGILCENLERSLEFYQNILGLEINE   67 (160)
Q Consensus        41 ~hv~l~v~D~~~a~~Fy~~~lG~~~~~   67 (160)
                      .++.+.|+|++++.+.... .|.+...
T Consensus        73 ~~~~~~v~di~~~~~~l~~-~G~~~~~   98 (125)
T cd07264          73 FEIAFVTDDVAAAFARAVE-AGAVLVS   98 (125)
T ss_pred             EEEEEEcCCHHHHHHHHHH-cCCEecc
Confidence            4789999999999988876 7887754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=81.58  E-value=9.6  Score=24.00  Aligned_cols=26  Identities=12%  Similarity=0.280  Sum_probs=22.1

Q ss_pred             eEEEEEeCCHHHHHHHHHHCCCeEec
Q 031406          110 RHTCIAIRDVSKLKMILDKAGISYTL  135 (160)
Q Consensus       110 ~hi~f~v~d~~~~~~~l~~~G~~~~~  135 (160)
                      .++.+.|+|+++..+.....|.+...
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~lGf~~~~   27 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTALGFEFNP   27 (124)
T ss_pred             EEEEeecCCHHHHHHHHHHCCCEEcc
Confidence            57899999999999888888988754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=80.58  E-value=14  Score=24.54  Aligned_cols=56  Identities=11%  Similarity=-0.073  Sum_probs=32.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHH--hcCCEEeeecCCCCCC-cceEEEEe-CCcEEEEEec
Q 031406           38 VSVHHVGILCENLERSLEFYQN--ILGLEINEARPHDKLP-YRGAWLWV-GAEMIHLMEL   93 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~--~lG~~~~~~~~~~~~~-~~~~~~~~-g~~~~~l~~~   93 (160)
                      .+++|+++.|.|++++.+.+..  ..|+++.........+ ....++.. +|..++|..-
T Consensus        66 ~g~~Hiaf~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~  125 (153)
T cd07257          66 SGVHHAAFEVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTD  125 (153)
T ss_pred             CceeEEEEEcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcC
Confidence            5789999999999999854443  2677765421111111 11223333 4667777643

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=80.27  E-value=15  Score=24.51  Aligned_cols=51  Identities=12%  Similarity=0.150  Sum_probs=33.1

Q ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCeEeccC------C-CceEEEEE-cCCCCeEEEEe
Q 031406          107 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK------S-GRPAIFTR-DPDANALEFTQ  157 (160)
Q Consensus       107 ~~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~------~-g~~~~~~~-DPdG~~ie~~~  157 (160)
                      .++.|+++.|+|++++.+.... .|.++....      . +....++. +...+.+.+.+
T Consensus         8 ~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~   67 (154)
T cd07237           8 QGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAE   67 (154)
T ss_pred             CccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEc
Confidence            3479999999999999888866 788874321      1 22333333 44456666654

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	160
3rmu_A	134	Crystal Structure Of Human Methylmalonyl-Coa Epimer		2e-06

>pdb|3RMU|A Chain A, Crystal Structure Of Human Methylmalonyl-Coa Epimerase, Mcee Length = 134

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 14/125 (11%)
Query: 40  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRG---AWLWVG---AEMIHLMEL 93
           ++HV I   +LE++  FY+NILG +++EA P   LP  G    ++ +G    E++H + L
Sbjct: 6   LNHVAIAVPDLEKAAAFYKNILGAQVSEAVP---LPEHGVSVVFVNLGNTKMELLHPLGL 62
Query: 94  PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIFTRDP 148
            +P     +    G   H CI + +++   M L K  I        +   G+P IF    
Sbjct: 63  DSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPK 122
Query: 149 DANAL 153
           D   +
Sbjct: 123 DCGGV 127

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	160
2p25_A	126	Glyoxalase family protein; structural genomics, MC	1e-30
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	6e-27
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	7e-27
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	7e-24
1nki_A	135	Probable fosfomycin resistance protein; potassium	3e-22
3ghj_A	141	Putative integron gene cassette protein; integron	1e-21
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	5e-21
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	1e-19
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-18
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	6e-18
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	6e-17
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	1e-16
3huh_A	152	Virulence protein STM3117; structural genomics, ny	4e-16
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	5e-16
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	7e-16
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	3e-15
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	3e-15
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	2e-13
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	4e-13
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	5e-13
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	1e-12
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-11
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	2e-11
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	4e-05
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	5e-11
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	7e-05
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	1e-10
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	3e-10
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-10
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	6e-10
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	6e-10
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-09
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	2e-09
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	2e-08
2i7r_A	118	Conserved domain protein; structural genomics cons	5e-08
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	6e-08
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	8e-08
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	9e-08
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	1e-07
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	1e-07
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	5e-06
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	2e-07
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	2e-07
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	4e-07
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	6e-07
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	7e-07
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	1e-06
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	1e-06
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	5e-05
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	6e-06
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	6e-06
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	9e-06
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	5e-04
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	9e-06
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	1e-05
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	1e-05
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	2e-05
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	9e-05
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	2e-04
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	2e-04
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	2e-04
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	2e-04
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	2e-04
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	3e-04
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	3e-04
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	6e-04

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  106 bits (267), Expect = 1e-30
 Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 5/123 (4%)

Query: 39  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 98
            +HHV I   N + +  FY   LG E+       +       L +G++ + +        
Sbjct: 5   EIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPA 64

Query: 99  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALE 154
               PE  G  RH    +  + ++   L++ GI     +    +G+   F  DPD   LE
Sbjct: 65  RPSYPEALGL-RHLAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLE 123

Query: 155 FTQ 157
             +
Sbjct: 124 LHE 126

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 97.2 bits (242), Expect = 6e-27
 Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 13/125 (10%)

Query: 37  VVSVHHVGILC--ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP 94
           +  + HV +       E +  FY   +G+E    +P +     G W   G + IH+    
Sbjct: 8   IQGIDHVQVAAPVGCEEEARAFYGETIGMEEIP-KPEELKKRGGCWFKCGNQEIHIGVEQ 66

Query: 95  NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS--GRPAIFTRDPDANA 152
           N +P         +  H    +  + + K  L K GI      +       +  DP  N 
Sbjct: 67  NFNP--------AKRAHPAFYVLKIDEFKQELIKQGIEVIDDHARPDVIRFYVSDPFGNR 118

Query: 153 LEFTQ 157
           +EF +
Sbjct: 119 IEFME 123

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 97.1 bits (242), Expect = 7e-27
 Identities = 31/129 (24%), Positives = 44/129 (34%), Gaps = 11/129 (8%)

Query: 40  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLM-------E 92
           VHHV ++  + ++S EFY N LG E+       K       L  G   + +         
Sbjct: 6   VHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSN 65

Query: 93  LPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT----LSKSGRPAIFTRDP 148
              P      P      RH    + DV   +  L   GI          +G+   F  DP
Sbjct: 66  YCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDP 125

Query: 149 DANALEFTQ 157
           D   LE  +
Sbjct: 126 DGLPLELHE 134

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 89.8 bits (223), Expect = 7e-24
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 12/122 (9%)

Query: 37  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 96
           + S++H+ +   +L++S+ F+  +LGL ++           GA+L  G   + L      
Sbjct: 2   LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT------GAYLTCGDLWVCLSYDEAR 55

Query: 97  DPLSGRPEHGGRDRHTCIAIR--DVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANAL 153
                 P       H    +   D   L   L++AG++    +KS   + +  DPD + L
Sbjct: 56  QY---VPPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKL 112

Query: 154 EF 155
           E 
Sbjct: 113 EL 114

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 85.2 bits (211), Expect = 3e-22
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 11/120 (9%)

Query: 37  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 96
           +  ++H+ +   +L  S+ FY+++LG  +      +    +GA+L +G+  + L   P  
Sbjct: 2   LTGLNHLTLAVADLPASIAFYRDLLGFRL------EARWDQGAYLELGSLWLCLSREPQY 55

Query: 97  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANALEF 155
               G P          IA  D ++    L   G+     ++S   + +  DPD + LE 
Sbjct: 56  ----GGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEA 111

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 83.9 bits (208), Expect = 1e-21
 Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 18/124 (14%)

Query: 39  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 98
            +  V +  +NLE+S +FY  ILG E        +  +   W+   A M+ L E      
Sbjct: 28  GLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARR--WNFLWVSGRAGMVVLQE------ 79

Query: 99  LSGRPEHGGRDRHTCIAI--RDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANA 152
                +   + +H    +   ++  LK  L+  G+S     +       +++  DP+ +A
Sbjct: 80  ----EKENWQQQHFSFRVEKSEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHA 135

Query: 153 LEFT 156
           LEFT
Sbjct: 136 LEFT 139

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 83.0 bits (205), Expect = 5e-21
 Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 13/130 (10%)

Query: 40  VHHVGILCENLERSLEFYQNILGLEI------NEARPHDKLPYRGAWLWVGAE-MIHLME 92
           VHH+ +  ++++ S  FY  ILGL                   + A        ++ L  
Sbjct: 20  VHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFG 79

Query: 93  LPNPDPLSGRPEH-GGRDRHTCIAIRDVSKLKMI--LDKAGISYTLSKSGRP---AIFTR 146
            P   P    PE    R  H    I      + +  + +  I+       RP    ++  
Sbjct: 80  EPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFY 139

Query: 147 DPDANALEFT 156
           DPD   +E  
Sbjct: 140 DPDGFMIEIR 149

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 75.1 bits (185), Expect = 3e-18
 Identities = 28/124 (22%), Positives = 44/124 (35%), Gaps = 7/124 (5%)

Query: 37  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 96
           +  V HV +   +L+ S  +Y  IL  +       D   +       G   I L E    
Sbjct: 3   LSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGV-LPGGLSIVLREHDGG 61

Query: 97  DPLSGRPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYT--LSKSGRPAIFTRDPDAN 151
                     G D H   ++  ++ L ++   L KAG ++T          +  RD D  
Sbjct: 62  GTDLFDETRPGLD-HLSFSVESMTDLDVLEERLAKAGAAFTPTQELPFGWILAFRDADNI 120

Query: 152 ALEF 155
           ALE 
Sbjct: 121 ALEA 124

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 74.8 bits (184), Expect = 6e-18
 Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 15/131 (11%)

Query: 37  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN- 95
             ++    +  ++L+ +  FY+++ GLE        KLP +  +   G +M+ L +    
Sbjct: 6   PSAIMETALYADDLDAAEAFYRDVFGLE-----MVLKLPGQLVFFKCGRQMLLLFDPQES 60

Query: 96  --PDPLSGRPEHGGRDR-HTCIAIR---DVSKLKMILDKAGI---SYTLSKSGRPAIFTR 146
              D  +  P HG   + H C       +V + K   +   I    Y    +G  +++ R
Sbjct: 61  SRADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIR 120

Query: 147 DPDANALEFTQ 157
           DP  N++E  +
Sbjct: 121 DPAGNSVEVGE 131

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 71.8 bits (176), Expect = 6e-17
 Identities = 17/124 (13%), Positives = 38/124 (30%), Gaps = 11/124 (8%)

Query: 37  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPN 95
           +  + H+  +  +LER     + +       A   ++    R  +  +G   + +M+   
Sbjct: 2   IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEK 61

Query: 96  PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDAN 151
                   E         I   D  +    + K G+     +        +I+  D D +
Sbjct: 62  L------AERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNH 115

Query: 152 ALEF 155
             E 
Sbjct: 116 MFEL 119

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 70.9 bits (174), Expect = 1e-16
 Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 10/128 (7%)

Query: 40  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP- 98
           ++HV I   +LE++  FY+NILG +++EA P  +      ++ +G   + L+     D  
Sbjct: 6   LNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSP 65

Query: 99  --LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT-----LSKSGRPAIF--TRDPD 149
                +    G   H CI + +++   M L K  I        +   G+P IF   +D  
Sbjct: 66  IAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCG 125

Query: 150 ANALEFTQ 157
              +E  Q
Sbjct: 126 GVLVELEQ 133

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 70.1 bits (171), Expect = 4e-16
 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 13/128 (10%)

Query: 37  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 96
           +  + H+ +   ++  ++ FY+ +LG      + +         L  GA+ I+L +    
Sbjct: 21  IDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQNR------KALIFGAQKINLHQQEME 74

Query: 97  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-------AIFTRDPD 149
                     G      I    ++ +   + +AGIS       R        +I+ RDPD
Sbjct: 75  FEPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPD 134

Query: 150 ANALEFTQ 157
            N +E +Q
Sbjct: 135 GNLIEISQ 142

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 69.4 bits (170), Expect = 5e-16
 Identities = 22/125 (17%), Positives = 49/125 (39%), Gaps = 7/125 (5%)

Query: 40  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-P 98
           VHH+G   +N++ +L+ ++ +  +E +E    +       ++  G   + L+     D P
Sbjct: 8   VHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSP 67

Query: 99  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIS------YTLSKSGRPAIFTRDPDANA 152
           ++   + G    H C  + D+ K    + + G +         +   R   F    D   
Sbjct: 68  INKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGL 127

Query: 153 LEFTQ 157
           +E  +
Sbjct: 128 IELLE 132

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 68.7 bits (168), Expect = 7e-16
 Identities = 18/124 (14%), Positives = 41/124 (33%), Gaps = 11/124 (8%)

Query: 37  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPN 95
           +  + H+ ++ ++L ++  F QNI   E   +         +  +  +    I +ME  +
Sbjct: 2   ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDS 61

Query: 96  PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDAN 151
                   E         I   +V +    +   G+     +        +I+  D D +
Sbjct: 62  L------QERTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNH 115

Query: 152 ALEF 155
             E 
Sbjct: 116 LFEL 119

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 67.3 bits (164), Expect = 3e-15
 Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 10/125 (8%)

Query: 40  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDP 98
           + HV +   NLE+  +FY    G   N+   +    +   +L       + +M   +   
Sbjct: 4   IEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTG 63

Query: 99  LSGRPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYT----LSKSGRPAIFTRDPDAN 151
            +     G    H  I+      +  +   L + G +      ++  G       DP+ N
Sbjct: 64  KTTGENLGW--AHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGN 121

Query: 152 ALEFT 156
            +E T
Sbjct: 122 RIEIT 126

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 67.3 bits (164), Expect = 3e-15
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 13/126 (10%)

Query: 37  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 96
           +  + H+ +   ++  +  FY+ +LG++                L  G + I+L +L N 
Sbjct: 8   ISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAG------RIALEFGHQKINLHQLGNE 61

Query: 97  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR-------PAIFTRDPD 149
                +    G      I    +S     ++  G++       R        + + RDPD
Sbjct: 62  FEPKAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPD 121

Query: 150 ANALEF 155
            N +E 
Sbjct: 122 GNLIEV 127

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 62.9 bits (153), Expect = 2e-13
 Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 9/127 (7%)

Query: 40  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-- 97
           + H+GI   +++  L FY   L L++           + A+L +G   I L+E  + +  
Sbjct: 9   LDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESP 68

Query: 98  PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY-----TLSKSGRPAIF--TRDPDA 150
                 + G    H  I ++ + +    + + G+            G    F   R    
Sbjct: 69  IAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARG 128

Query: 151 NALEFTQ 157
              EF +
Sbjct: 129 VLYEFCE 135

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 61.8 bits (150), Expect = 4e-13
 Identities = 24/126 (19%), Positives = 39/126 (30%), Gaps = 13/126 (10%)

Query: 40  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 99
           +HHV I  ++LE S+ F+  +LG    E         RG     G   +  ++  +    
Sbjct: 21  LHHVEINVDHLEESIAFWDWLLGELGYE-DYQS--WSRGKSYKHGKTYLVFVQTEDRFQT 77

Query: 100 SGRPEHGGRDRHTCIAIRD---VSKLKMILDKAGISYTLSKSGRP-------AIFTRDPD 149
                      H          V +L   L + G                  A+F  DP+
Sbjct: 78  PTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPN 137

Query: 150 ANALEF 155
              +E 
Sbjct: 138 RIKVEI 143

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 62.0 bits (150), Expect = 5e-13
 Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 13/124 (10%)

Query: 39  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 98
            + H+ +  ++++ +  FY  ILG+E+   +           L  G +  +L E+     
Sbjct: 27  RLDHIVMTVKSIKDTTMFYSKILGMEVMTFKEDR------KALCFGDQKFNLHEVGKEFE 80

Query: 99  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-------AIFTRDPDAN 151
                   G      I    + ++   L    +        R        +I+ RDPD N
Sbjct: 81  PKAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRN 140

Query: 152 ALEF 155
            +E 
Sbjct: 141 LIEV 144

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 61.0 bits (148), Expect = 1e-12
 Identities = 18/142 (12%), Positives = 47/142 (33%), Gaps = 23/142 (16%)

Query: 37  VVSVHHVGILCENLERSLEFYQNILGLEI-----NEARPHDKLP------YRGAWLWV-- 83
           ++ + +V I+ E+L+ ++ F++  +GL +      E     ++          A +    
Sbjct: 9   LLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD 67

Query: 84  GAEMIHLMELPNPDPLSGRPEHGGRD---RHTCIAIRDVSKLKMILDKAGISYTLSKSGR 140
           G   I L     P  ++                  + D+ ++   L K G    + +  +
Sbjct: 68  GHSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAE-LVGEVVQ 126

Query: 141 P-----AIFTRDPDANALEFTQ 157
                   + R  +   +   +
Sbjct: 127 YENSYRLCYIRGVEGILIGLAE 148

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 57.7 bits (139), Expect = 1e-11
 Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 21/129 (16%)

Query: 45  ILCENLERSLEFYQNILGLEINEARPHDKLPYR---GAWLWVGAEMIHLMELPNPDPLSG 101
           + C ++  S  F+ ++LG E+   RP ++  Y    G  +     M+  +   +   LSG
Sbjct: 11  LYCFDINVSQSFFVDVLGFEVKYERPDEEFVYLTLDGVDV-----MLEGIAGKSRKWLSG 65

Query: 102 RPEHG-GRDRHTCIAIRDVSKLKMILDKAGISYTL------------SKSGRPAIFTRDP 148
             E   G   +    + D+  L   ++++                  S + +     + P
Sbjct: 66  DLEFPLGSGVNFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTP 125

Query: 149 DANALEFTQ 157
           D     F Q
Sbjct: 126 DGYLFRFCQ 134

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 59.7 bits (144), Expect = 2e-11
 Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 9/127 (7%)

Query: 40  VHHVGILCENLERSLEFYQNILGLEI-----NEARPHDKLPYRGAWLWVGAEMIHLMELP 94
           +HH+  +  + + + +FY  +LGL +     N   P     Y G     G     +   P
Sbjct: 9   IHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGN--EGGKPGTIITFFP 66

Query: 95  NPDPLSGRPEHGGRDRHT-CIAIRDVSKLKMILDKAGISYTLSKS-GRPAIFTRDPDANA 152
                 G    G     +  +    ++  +  L+K  + YT  +  G   +   DP    
Sbjct: 67  WAGARQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYTKIERFGEQYVEFDDPHGLH 126

Query: 153 LEFTQVD 159
           LE  + +
Sbjct: 127 LEIVERE 133

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 41.2 bits (96), Expect = 4e-05
 Identities = 21/122 (17%), Positives = 31/122 (25%), Gaps = 14/122 (11%)

Query: 40  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 99
                +L E  +++ +  +NI+GLE                      +I L   P     
Sbjct: 154 FGGATLLSEQPDKTADLLENIMGLERVGKEGDFVRYRSAGD---IGNVIDLKLTPIGRGQ 210

Query: 100 SGRPEHGGRDRHTCIAIRDVSKLKMILDK---AGISYTLSKSGR---PAIFTRDPDANAL 153
            G     G   H      D              G   T     R    AI+ R+      
Sbjct: 211 MGA----GTVHHIAWRANDDEDQLDWQRYIASHGYGVT-PVRDRNYFNAIYFREHGEILF 265

Query: 154 EF 155
           E 
Sbjct: 266 EI 267

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 58.5 bits (141), Expect = 5e-11
 Identities = 21/129 (16%), Positives = 43/129 (33%), Gaps = 11/129 (8%)

Query: 40  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL----PN 95
            HH+ ++ +N   +  FY+N+LGL   +   +   P     L+ G +             
Sbjct: 31  HHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPS-MYHLFYGDKTGSPGTELSFFEI 89

Query: 96  PDPLSGRPEHGGRDRHTCIAIRDVSKL---KMILDKAGISYT--LSKSGRPAIFTRDPDA 150
           P                 + +     L   K   +K  + ++   + + RPA+   D + 
Sbjct: 90  PLVGRTYRGTNA-ITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEG 148

Query: 151 NALEFTQVD 159
             L     +
Sbjct: 149 LRLVLLVSN 157

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 40.8 bits (95), Expect = 7e-05
 Identities = 15/123 (12%), Positives = 40/123 (32%), Gaps = 13/123 (10%)

Query: 40  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 99
           +  V +    L++       I G          +      +  +  E    + +   D  
Sbjct: 181 MGSVELTVRRLDKMASTLTEIFGY-----TEVSRNDQEAIFQSIKGEAFGEIVVKYLDGP 235

Query: 100 SGRPEHGGRDRHTCIAIRDVSKL---KMILDKAGISYTLSKSGR---PAIFTRDPDANAL 153
           + +P  G    H  I +++ ++L   +  + + G   +     R    +++ R+ +    
Sbjct: 236 TEKPGRGS-IHHLAIRVKNDAELAYWEEQVKQRGFHSS-GIIDRFYFKSLYFRESNGILF 293

Query: 154 EFT 156
           E  
Sbjct: 294 EIA 296

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 55.3 bits (133), Expect = 1e-10
 Identities = 23/121 (19%), Positives = 42/121 (34%), Gaps = 8/121 (6%)

Query: 41  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 100
            +      ++ RS  FY++ LGL+I E      L   G  +  G  +   +   + D   
Sbjct: 10  VNPIPFVRDINRSKSFYRDRLGLKILEDFGSFVLFETGFAIHEGRSLEETIWRTSSDA-- 67

Query: 101 GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY----TLSKSGRPAIFTRDPDANALEFT 156
            +  +G R+        DV      +    +           G+      DPD +A+E  
Sbjct: 68  -QEAYGRRNMLLYFEHADVDAAFQDI-APHVELIHPLERQAWGQRVFRFYDPDGHAIEVG 125

Query: 157 Q 157
           +
Sbjct: 126 E 126

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 53.6 bits (129), Expect = 3e-10
 Identities = 14/118 (11%), Positives = 33/118 (27%), Gaps = 16/118 (13%)

Query: 41  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 100
            H+ +   ++  + EF +   GL  +            A+  +      ++ L     + 
Sbjct: 5   KHLNLTVADVVAAREFLEKYFGLTCSGT-------RGNAFAVMRDNDGFILTL-----MK 52

Query: 101 GRPEHGGRDRHTCIAIRDVSKLKMILDK---AGISYTLSKSGRP-AIFTRDPDANALE 154
           G+     +  H         ++  I  +    G      K       +   P    +E
Sbjct: 53  GKEVQYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIE 110

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 54.2 bits (130), Expect = 3e-10
 Identities = 23/129 (17%), Positives = 36/129 (27%), Gaps = 11/129 (8%)

Query: 39  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVG---AEMIHLMELP 94
            + +V I   ++     FYQ + G +  E+               +G    E   LM+L 
Sbjct: 8   DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQLA 67

Query: 95  NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDA 150
                SG                 V KL  +   AG +   +              DP+ 
Sbjct: 68  QFSETSGIKFLLN---FDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPER 124

Query: 151 NALEFTQVD 159
           N      V 
Sbjct: 125 NVFRINNVL 133

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 55.1 bits (132), Expect = 6e-10
 Identities = 26/150 (17%), Positives = 44/150 (29%), Gaps = 25/150 (16%)

Query: 16  SDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP 75
           SDKI    +            + S+  + +    L+R L FY N+LG +    +      
Sbjct: 3   SDKIHHHHHHSSGENLYFQGHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA----- 57

Query: 76  YRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI--RDVSKLKMILDKAGISY 133
                + +G   I           +          H  I I      + K  L   G   
Sbjct: 58  -DAFTIQLGVSQIQFRA-------AADGTKPF--YHIAINIAANHFQEGKAWLSGFGELL 107

Query: 134 TLSKSGRP--------AIFTRDPDANALEF 155
           T +   +         + +  DP  N +E 
Sbjct: 108 TENDEDQAYFPFFNAYSCYVEDPSGNIIEL 137

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 53.2 bits (127), Expect = 6e-10
 Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 16/125 (12%)

Query: 39  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 98
            V H+ I   +L+ + +FY   LG ++    P           +    + HL +  + + 
Sbjct: 9   DVFHLAIPARDLDEAYDFYVTKLGCKLARRYPD----RITLDFFGDQLVCHLSDRWDREV 64

Query: 99  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR--------PAIFTRDPDA 150
                  G     T    +    L  +  + GI +    S R           F  DP  
Sbjct: 65  SMYPRHFG----ITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSN 120

Query: 151 NALEF 155
           N LEF
Sbjct: 121 NLLEF 125

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 52.8 bits (126), Expect = 1e-09
 Identities = 18/126 (14%), Positives = 37/126 (29%), Gaps = 8/126 (6%)

Query: 40  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 99
           +H   +  ++  ++  FY   LG  +    P     +         +   L+  P+    
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAA 86

Query: 100 SG---RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL----SKSGRPAIFTRDPDANA 152
                             A+ D++     L   G+ +T           AI   D   N 
Sbjct: 87  VTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAIL-DDTCGNL 145

Query: 153 LEFTQV 158
           ++  Q+
Sbjct: 146 IQLMQI 151

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 51.5 bits (123), Expect = 2e-09
 Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 15/128 (11%)

Query: 38  VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 97
           + +  + I   +L+  L FY+ I+G +   A   DK                L  + NP 
Sbjct: 5   LLITSITINTSHLQGMLGFYR-IIGFQF-TASKVDKGSEVHR-AVHNGVEFSLYSIQNPQ 61

Query: 98  PLSGRPEHGGRDRHTCIAIRDVSK-LKMILDKAGISYTL----SKSGRPAIFTRDPDANA 152
                             I D+ K ++ ++   G    L       G+ AI   DPD ++
Sbjct: 62  R------SQIPSLQLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKKAIV-LDPDGHS 114

Query: 153 LEFTQVDG 160
           +E  +++G
Sbjct: 115 IELCELEG 122

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 49.8 bits (119), Expect = 2e-08
 Identities = 20/122 (16%), Positives = 41/122 (33%), Gaps = 19/122 (15%)

Query: 42  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 101
              +   +L  +LEFY+ +L   +  A   +          +   ++          ++G
Sbjct: 9   LSRLYVADLNPALEFYEELLETPV--AMRFEIPQTGVELAQISTILL----------IAG 56

Query: 102 RPEHGGRDRHTCIAIR--DVSKLKMILDKAGISYTL----SKSGRPAIFTRDPDANALEF 155
             E     R+T        + K K  L++ G           +GR     R  D + +E+
Sbjct: 57  SEEALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMTV-RHSDGSVIEY 115

Query: 156 TQ 157
            +
Sbjct: 116 VE 117

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 47.9 bits (114), Expect = 5e-08
 Identities = 18/121 (14%), Positives = 42/121 (34%), Gaps = 15/121 (12%)

Query: 42  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 101
            + I+  N+ +     ++IL  + + A          A   +G+  + L +         
Sbjct: 8   QLDIIVSNVPQVCADLEHILDKKADYANDG------FAQFTIGSHCLMLSQNH-----LV 56

Query: 102 RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEFTQ 157
             E+        I + DV +    L++ GI      +       ++  + P    L+F +
Sbjct: 57  PLENFQSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYR 116

Query: 158 V 158
           +
Sbjct: 117 M 117

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 47.9 bits (114), Expect = 6e-08
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 18/121 (14%)

Query: 45  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 104
           +   +++ +L  + + LG E+     +       A+L +    + L+E P          
Sbjct: 13  LHIPDMQEALTLFCDTLGFELKYRHSNY------AYLELSGCGLRLLEEPARKI----IP 62

Query: 105 HGGRDRHTCIAIRDV----SKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEFT 156
            G      CI + D+    +KL   L+             P        R PD + L FT
Sbjct: 63  DGIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFT 122

Query: 157 Q 157
            
Sbjct: 123 A 123

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 47.9 bits (114), Expect = 8e-08
 Identities = 21/142 (14%), Positives = 46/142 (32%), Gaps = 20/142 (14%)

Query: 36  GVVSVHHVGILCENLERSLEFYQNILGLE-----INEARPHDKLPYRG---------AWL 81
            + +   +GI+  ++E SL+ Y    G+E       +        + G         A+ 
Sbjct: 16  DMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFF 75

Query: 82  WVGAEMIHLMELPNPD--PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIS--YTLSK 137
            +G   + L+E             ++G    H    ++D+ +    L + G+        
Sbjct: 76  ELGPLQLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDF 135

Query: 138 SGRPAIF--TRDPDANALEFTQ 157
            G    +  T       +E  +
Sbjct: 136 EGGRYAYIDTLRALKVMIELLE 157

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 47.7 bits (113), Expect = 9e-08
 Identities = 21/125 (16%), Positives = 33/125 (26%), Gaps = 14/125 (11%)

Query: 39  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 98
            V  + +   +LE S  FY    G       P         +  +   ++    + N   
Sbjct: 5   QVAVITLGIGDLEASARFYGEGFGWAPVFRNPE------IIFYQMNGFVLATWLVQNLQE 58

Query: 99  LSGRPEHGGRDRHT----CIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDA 150
             G                 A  +V+ L   L  AG          P      +  DPD 
Sbjct: 59  DVGVAVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDG 118

Query: 151 NALEF 155
           +  E 
Sbjct: 119 HIWEI 123

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score = 47.0 bits (112), Expect = 1e-07
 Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 14/115 (12%)

Query: 42  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE------MIHLMELPN 95
           H  I   +L+RS++FY   LG++    R  D    +   +++G        ++ L     
Sbjct: 11  HTMIRVGDLDRSIKFYTERLGMK--VLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 68

Query: 96  PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL-SKSGRPAIFTRDPD 149
                   +H     H  I + DV +L   + K  +      +SG  A F  DPD
Sbjct: 69  VTS----YKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGFMA-FVVDPD 118

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 48.3 bits (115), Expect = 1e-07
 Identities = 18/132 (13%), Positives = 40/132 (30%), Gaps = 24/132 (18%)

Query: 34  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 93
           + GV+   HV +   ++ ++LE Y  +LGL   +     ++  +                
Sbjct: 2   NKGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKA--------------W 47

Query: 94  PNPDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-----RPAI 143
              D  S             +  +      + +L+  L   G +     +G        +
Sbjct: 48  TEVDKFSLVLREADEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRV 107

Query: 144 FTRDPDANALEF 155
             + P  +  E 
Sbjct: 108 RFQAPSGHHFEL 119

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 44.1 bits (104), Expect = 5e-06
 Identities = 19/145 (13%), Positives = 43/145 (29%), Gaps = 22/145 (15%)

Query: 23  TNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW 82
            N +   ++++    V   H  +  + L  + + +  +LG  + E    +       +L 
Sbjct: 134 VNPEAWPRDLKGMAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLS 193

Query: 83  VGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA---IRDVSKLKMILDKAG--ISYTLSK 137
           +  +   +  + +P+         GR  H         D+ +   ++      I      
Sbjct: 194 LSTKAHDVAFIHHPEK--------GRLHHVSFHLETWEDLLRAADLISMTDTSIDIGP-- 243

Query: 138 SGR----PAIFT--RDPDANALEFT 156
             R            DP  N  E  
Sbjct: 244 -TRHGLTHGKTIYFFDPSGNRNEVF 267

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 47.0 bits (111), Expect = 2e-07
 Identities = 18/138 (13%), Positives = 44/138 (31%), Gaps = 11/138 (7%)

Query: 28  NIKEIRDYGVVSVHHVGIL-CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA- 85
            +    + G V   +  +   +++++++++++ ILG   +     D+       ++    
Sbjct: 9   KMSRFSERGYVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPS 68

Query: 86  --EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-- 141
              + HL          G P  G       + I  +  L   + + G         +P  
Sbjct: 69  EVAVAHLTPFRGFHLFKGEPIKGV---AGFMMIEGIDALHKYVKENGWDQISDIYTQPWG 125

Query: 142 --AIFTRDPDANALEFTQ 157
                    D   L F +
Sbjct: 126 ARECSITTTDGCILRFFE 143

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 47.0 bits (111), Expect = 2e-07
 Identities = 17/126 (13%), Positives = 41/126 (32%), Gaps = 14/126 (11%)

Query: 41  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 100
               +  +N   S +FY+ +LG++  E+ P         ++      + L      +P  
Sbjct: 27  DFTILYVDNPPASTQFYKALLGVDPVESSPT-----FSLFVLANGMKLGLWSRHTVEP-- 79

Query: 101 GRPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYTLSKSGRP---AIFTRDPDANALE 154
            +    G        + + +++         +G++     +           DPD++ L 
Sbjct: 80  -KASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLR 138

Query: 155 FTQVDG 160
                G
Sbjct: 139 VYAFAG 144

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score = 46.6 bits (110), Expect = 4e-07
 Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 27/136 (19%)

Query: 41  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-------------------RGAWL 81
               +  ++ ++SL+FY  +LGL + +      + +                   + AW 
Sbjct: 33  QQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWT 92

Query: 82  WVGAEMIHLMELPNPDPLSGRPEHGGRD-----RHTCIAIRDVSKLKMILDKAGISYT-L 135
           +     + L      +    +  H G        H  IA+ DV       ++ G+ +   
Sbjct: 93  FSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKK 152

Query: 136 SKSGRPAI--FTRDPD 149
              G+     F +DPD
Sbjct: 153 PDDGKMKGLAFIQDPD 168

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 45.1 bits (106), Expect = 7e-07
 Identities = 20/118 (16%), Positives = 38/118 (32%), Gaps = 8/118 (6%)

Query: 41  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 100
           + V    +N  +S EFY+N+L  +  E+ P         ++      + L      +P +
Sbjct: 8   NLVLFYVKNPAKSEEFYKNLLDTQPIESSPT-----FAMFVMKTGLRLGLWAQEEIEPKA 62

Query: 101 GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP---AIFTRDPDANALEF 155
            +   G        +   V ++        IS     +           DPD + L  
Sbjct: 63  HQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRI 120

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score = 44.3 bits (105), Expect = 1e-06
 Identities = 24/113 (21%), Positives = 49/113 (43%), Gaps = 5/113 (4%)

Query: 42  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 101
           H  +   +L+RS++FY  +LG+++     + +  Y  A++  G E    +     +    
Sbjct: 5   HTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVD 64

Query: 102 RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT----LSKSGRPAI-FTRDPD 149
           + E G    H  +++ + ++    + + G + T      K G   I F  DPD
Sbjct: 65  KYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPD 117

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 45.8 bits (108), Expect = 1e-06
 Identities = 18/129 (13%), Positives = 39/129 (30%), Gaps = 23/129 (17%)

Query: 35  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP 94
           + +  +    +     + +L+F+   LG+ +   R    +  RG                
Sbjct: 7   FDIAHLARAELFSPKPQETLDFFTKFLGMYVTH-REGQSVYLRG--------------YE 51

Query: 95  NPDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKS---GRPAIFTR 146
           +P P S +            A+R      + +    L    +  T S+           +
Sbjct: 52  DPYPWSLKITEAPEAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQ 111

Query: 147 DPDANALEF 155
            PD + L+ 
Sbjct: 112 SPDGHNLQL 120

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 41.1 bits (96), Expect = 5e-05
 Identities = 18/132 (13%), Positives = 39/132 (29%), Gaps = 15/132 (11%)

Query: 33  RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLME 92
           +   V  + H+ ++  ++    + ++  LG    E R  D     GAW+        +  
Sbjct: 147 QGIPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTE-RVVDGNVEIGAWMSSNLLGHEVAC 205

Query: 93  LPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAG--ISYTLSKSGR----PAIFT- 145
           + +     G+  H      T    +       +       I        +     + F  
Sbjct: 206 MRDMTGGHGKLHHLAFFYGT---GQHNIDAVEMFRDYDIQIEAGP---DKHGITQSQFLY 259

Query: 146 -RDPDANALEFT 156
             +P  N +E  
Sbjct: 260 VFEPGGNRIELF 271

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 42.4 bits (100), Expect = 6e-06
 Identities = 20/124 (16%), Positives = 33/124 (26%), Gaps = 16/124 (12%)

Query: 38  VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 97
           V      I      R+  FY +ILG+ +  A  H              E    +      
Sbjct: 6   VRRVVANIATPEPARAQAFYGDILGMPV--AMDHG----WIVTHASPLEAHAQVSFAREG 59

Query: 98  PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANAL 153
                   G       I + +  ++   + KAG+               +F RDP    +
Sbjct: 60  G------SGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLI 113

Query: 154 EFTQ 157
               
Sbjct: 114 NILS 117

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 43.8 bits (103), Expect = 6e-06
 Identities = 23/129 (17%), Positives = 41/129 (31%), Gaps = 25/129 (19%)

Query: 37  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 96
           +V   ++ I+  +L +S EFY ++LGL + E    + +  R               L   
Sbjct: 15  IVRCAYMEIVVTDLAKSREFYVDVLGLHVTE-EDENTIYLRS--------------LEEF 59

Query: 97  DPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYT-----LSKSGRPAIFTR 146
              +     G        A R     +V   +    + G          +K    ++   
Sbjct: 60  IHHNLVLRQGPIAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVE 119

Query: 147 DPDANALEF 155
           DP     EF
Sbjct: 120 DPLGFPYEF 128

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 43.3 bits (102), Expect = 9e-06
 Identities = 21/130 (16%), Positives = 38/130 (29%), Gaps = 24/130 (18%)

Query: 36  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 95
           GV+   H  +   NLE  + FY+N+LGL         ++ ++                  
Sbjct: 5   GVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQGRVYFKC--------------WDE 50

Query: 96  PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSGRP-----AIFT 145
            D                   +      + KL   L   G++ T   +G        +  
Sbjct: 51  RDHSCYIIREADTAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRF 110

Query: 146 RDPDANALEF 155
             P  + +E 
Sbjct: 111 ELPSGHLIEL 120

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 38.3 bits (89), Expect = 5e-04
 Identities = 22/157 (14%), Positives = 41/157 (26%), Gaps = 23/157 (14%)

Query: 11  EPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEA-R 69
           E     + I        N +       + + H  +   N+    + +  +LG  + E   
Sbjct: 123 EKTCVGNGISEVNPAPWNAQREHGIAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVL 182

Query: 70  PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA---IRDVSKLKMIL 126
             D     G WL    ++  +  +  P+         G+  H          V +   I+
Sbjct: 183 SPDGDSDMGIWLSCSHKVHDIAFVEYPEK--------GKLHHCSFLLESWEQVLRAGDIM 234

Query: 127 DKAG--ISYTLSKSGR----PAIFT--RDPDANALEF 155
                 +        R            DP  N  E 
Sbjct: 235 SMNEVNVDIGP---TRHGVTRGCTIYAWDPSGNRFET 268

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 42.3 bits (99), Expect = 9e-06
 Identities = 18/138 (13%), Positives = 40/138 (28%), Gaps = 17/138 (12%)

Query: 37  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV------GAEMIHL 90
            + + HV   C + + + ++YQ   G        + +       +            + +
Sbjct: 7   FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQV 66

Query: 91  MELPNPD-PLSGRPEHGGRDR---HTCIAIRDVSKLKMILDKAGISY-----TLSKSGRP 141
           M   N +  ++             H    + D+  +   L + G+        L   G  
Sbjct: 67  MAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR 126

Query: 142 AIF--TRDPDANALEFTQ 157
             F   +      +E TQ
Sbjct: 127 INFMHPKSGKGVLIELTQ 144

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 41.8 bits (98), Expect = 1e-05
 Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 9/122 (7%)

Query: 41  HHVGILCENLERSLEFYQNILGLEI---NEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 97
               ++ E++ +SLEFY+  LG+EI    ++ PH +    G    +  + +  +   +P+
Sbjct: 6   SLFAVVVEDMAKSLEFYRK-LGVEIPAEADSAPHTEAVLDGGIR-LAWDTVETVRSYDPE 63

Query: 98  PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANAL 153
             +    H             V K    L  AG    L              +DPD N +
Sbjct: 64  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVV 123

Query: 154 EF 155
           + 
Sbjct: 124 DL 125

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 43.1 bits (101), Expect = 1e-05
 Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 25/129 (19%)

Query: 37  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 96
           ++   +  ++  +L +S  FY ++LGL ++     +++  R                   
Sbjct: 15  ILRCAYAELVVTDLAKSRNFYVDVLGLHVSY-EDENQIYLRSFE--------------EF 59

Query: 97  DPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-----RPAIFTR 146
              +     G       +A R     DV K +    + G      K G       A+   
Sbjct: 60  IHHNLVLTKGPVAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVE 119

Query: 147 DPDANALEF 155
           DP     EF
Sbjct: 120 DPLGFPYEF 128

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A Length = 124

 Score = 41.1 bits (96), Expect = 2e-05
 Identities = 13/114 (11%), Positives = 28/114 (24%), Gaps = 9/114 (7%)

Query: 47  CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG 106
             ++  ++EF+ + LG         D      A +      + +  + +           
Sbjct: 13  ARDVAEAVEFWTDRLGFSR--VFVEDDF----AGVVRDDVTLFISAVQDQVVPDNTQAWV 66

Query: 107 GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP---AIFTRDPDANALEFTQ 157
                  +       +      A          +P       RDP  N + F  
Sbjct: 67  WVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA 120

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 40.2 bits (94), Expect = 9e-05
 Identities = 21/130 (16%), Positives = 39/130 (30%), Gaps = 24/130 (18%)

Query: 36  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 95
            V  + +VG   ++ +    FY ++ GLE       +   ++                  
Sbjct: 5   RVTEIRYVGYGVKDFDAEKAFYADVWGLEPVG-EDANNAWFKAQG--------------A 49

Query: 96  PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDA 150
            +    +      +R   IA+      DV  L+  ++ AG          PA+       
Sbjct: 50  DEHHVVQLRRADENRIDVIALAADSRSDVDALRASVEAAGCKVA----SEPAVLATPGGG 105

Query: 151 NALEFTQVDG 160
               F   DG
Sbjct: 106 YGFRFFSPDG 115

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 28/132 (21%)

Query: 36  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 95
            V  + ++G+   NL+   ++   I+G+++ +    D++ Y                   
Sbjct: 3   KVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGEDDRI-YLRMD--------------- 46

Query: 96  PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-------RPAI 143
                      G D    I  R     ++ +L   L  AGI + ++             +
Sbjct: 47  RWHHRIVLHADGSDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLV 106

Query: 144 FTRDPDANALEF 155
              DP  N  E 
Sbjct: 107 KLHDPGGNPTEI 118

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 38.7 bits (90), Expect = 2e-04
 Identities = 21/118 (17%), Positives = 33/118 (27%), Gaps = 9/118 (7%)

Query: 49  NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGR 108
            L+  + FY+  L L+           Y G    +     HL E                
Sbjct: 21  QLDEIIRFYEEGLCLKR-IGEFSQHNGYDGVMFGLPHADYHL-EF-TQYEGGSTAPVPHP 77

Query: 109 DRHTCIAIRDVSKLKMI---LDKAGISYTLSKS---GRPAIFTRDPDANALEFTQVDG 160
           D      + +  +L  I   L   G     S++       +   DPD   + F    G
Sbjct: 78  DSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSKG 135

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 38.4 bits (89), Expect = 2e-04
 Identities = 18/132 (13%), Positives = 39/132 (29%), Gaps = 19/132 (14%)

Query: 37  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 96
            ++ +   +   N+ERS +FY+ I   E     P      R        + +  +     
Sbjct: 11  TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP------RYVAFPSSGDALFAIWSGGE 64

Query: 97  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDK------AGISYTLSKSGRP---AIFTRD 147
           +P++  P          I +     +  + ++        I                  D
Sbjct: 65  EPVAEIPRFS----EIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTFLISD 120

Query: 148 PDANALEFTQVD 159
           PD + +    +D
Sbjct: 121 PDGHIIRVCPLD 132

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 38.0 bits (88), Expect = 2e-04
 Identities = 24/126 (19%), Positives = 39/126 (30%), Gaps = 29/126 (23%)

Query: 47  CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV--GAEMIHLMELPNPDPLSGRPE 104
             + + +  FY+  LG  I              W+ +  G  M+     P  DPL+    
Sbjct: 11  SRDFDSTAAFYER-LGFGIVFRDAG--------WMILQRGDLMLEFFAHPGLDPLASWFS 61

Query: 105 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR----------PAIFT-RDPDANAL 153
                   C+ + D+++        GI  T S   R            +    DPD   L
Sbjct: 62  -------CCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLL 114

Query: 154 EFTQVD 159
              Q +
Sbjct: 115 RLIQNE 120

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A Length = 122

 Score = 37.9 bits (88), Expect = 2e-04
 Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 27/123 (21%)

Query: 47  CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG 106
             ++  ++ F+ + LG E  +    D   +  A +  G   +H+    +        ++ 
Sbjct: 13  AVDVPANVSFWVDTLGFEK-DFGDRD---F--AGVRRGDIRLHISRTEHQIV----ADNT 62

Query: 107 GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAI-----------FT-RDPDANALE 154
                  I + D   L     +A  +   + +  PA+           F  RDP  N + 
Sbjct: 63  S----AWIEVTDPDALHEEWARAVSTD-YADTSGPAMTPVGESPAGREFAVRDPAGNCVH 117

Query: 155 FTQ 157
           FT 
Sbjct: 118 FTA 120

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 38.8 bits (90), Expect = 3e-04
 Identities = 22/132 (16%), Positives = 41/132 (31%), Gaps = 28/132 (21%)

Query: 36  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 95
            V+ + ++GI  ++ +    F  ++LGL++ +    D+   R                 +
Sbjct: 6   AVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGEKDRFYLRM----------------D 49

Query: 96  PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKS-------GRPAI 143
                    H G+D    +  R     +   L   L  AG    +              +
Sbjct: 50  YWHHRIVVHHNGQDDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLM 109

Query: 144 FTRDPDANALEF 155
            T DP  N  E 
Sbjct: 110 KTEDPGGNPTEI 121

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 37.9 bits (88), Expect = 3e-04
 Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 9/120 (7%)

Query: 43  VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR 102
           V +   + +R++++   + G  +   +P        A L  G  ++ +     P  +S  
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRLLLRQPAIGTIRH-ADLDTGGGIVMVRRTGEPYTVS-- 62

Query: 103 PEHGGRDRHTCIAIRDVSKLKMILDKAG--ISYTLSKS---GRPAIFTRDPDANALEFTQ 157
              G   +   + + DV +  M    AG  I   L       R  +  RD + +  EFT+
Sbjct: 63  CAGGHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQYLV-RDLEGHLWEFTR 121

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 38.1 bits (88), Expect = 6e-04
 Identities = 17/131 (12%), Positives = 37/131 (28%), Gaps = 29/131 (22%)

Query: 37  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 96
           +  + ++G   +++     F    +GL        D   YR                 + 
Sbjct: 2   IERLGYLGFAVKDVPAWDHFLTKSVGLMAAG-SAGDAALYRA----------------DQ 44

Query: 97  DPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKS-------GRPAIF 144
                  + G  D      +       + ++   L +AG+++T               + 
Sbjct: 45  RAWRIAVQPGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLC 104

Query: 145 TRDPDANALEF 155
            +DP    LE 
Sbjct: 105 LQDPFGLPLEI 115

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	160
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.93
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.92
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.91
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.91
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.91
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.91
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.91
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.9
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.9
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.9
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.9
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.9
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.9
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.89
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.89
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.89
3ghj_A	141	Putative integron gene cassette protein; integron	99.89
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.88
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.88
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.88
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.88
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.88
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.88
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.88
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.88
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.88
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.87
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.87
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.87
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.87
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.87
2i7r_A	118	Conserved domain protein; structural genomics cons	99.86
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.86
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.86
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.86
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.86
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.85
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.85
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.85
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.85
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.85
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.84
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.84
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.84
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.84
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.83
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.83
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.82
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.82
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.81
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.81
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.8
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.79
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.77
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.77
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.76
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.76
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.76
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.76
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.75
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.75
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.75
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.74
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.74
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.74
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.74
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.73
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.73
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.73
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.73
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.73
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.72
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.72
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.72
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.71
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.7
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.7
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.69
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.69
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.69
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.68
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.68
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.67
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.67
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.67
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.64
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.61
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.61
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.61
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.6
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.58
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.56
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.51
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.49
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.49
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.48
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.47
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.46
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.43
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.37
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.37
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.32
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.31
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.26
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.72
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	98.69
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	98.29
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	97.41
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	96.67
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	95.16
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	94.99
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	94.91
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	94.76
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	94.7
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	94.63
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	94.38
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	94.3
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	94.25
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	93.7
3ghj_A	141	Putative integron gene cassette protein; integron	93.52
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	93.32
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	93.19
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	93.17
2p25_A	126	Glyoxalase family protein; structural genomics, MC	92.68
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	92.39
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	92.21
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	92.19
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	92.08
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	92.03
3huh_A	152	Virulence protein STM3117; structural genomics, ny	91.96
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	91.28
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	91.26
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	91.14
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	90.76
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	89.69
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	89.58
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	89.44
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	89.03
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	88.82
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	88.31
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	88.27
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	88.02
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	87.57
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	87.33
1nki_A	135	Probable fosfomycin resistance protein; potassium	86.89
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	86.84
2i7r_A	118	Conserved domain protein; structural genomics cons	86.44
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	86.13
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	86.08
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	85.84
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	84.72
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	84.65
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	84.32
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	83.83
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	83.65
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	83.2
3iuz_A	340	Putative glyoxalase superfamily protein; struct ge	82.5
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	81.89
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	81.86
2g3a_A	152	Acetyltransferase; structural genomics, PSI, prote	81.2
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	80.79

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.93  E-value=4.8e-25  Score=143.85  Aligned_cols=123  Identities=25%  Similarity=0.329  Sum_probs=97.1

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEe-------cCCCCCCCCCCCCCC
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLME-------LPNPDPLSGRPEHGG  107 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~-------~~~~~~~~~~~~~~~  107 (160)
                      |++.+++||.|.|+|++++++||+++|||++......+......+++..++..++|+.       ..........+..+.
T Consensus         1 M~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (134)
T 3l7t_A            1 MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCAPPERISWPREAC   80 (134)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETTEEEEEEECCTTSTTCCCCCCCCCSSSCCS
T ss_pred             CceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCCeEEEEEecccccccccCCccccCCCCCCC
Confidence            4578999999999999999999999999999875543343344577888888999988       333222222222455


Q ss_pred             CceEEEEEeCCHHHHHHHHHHCCCeEecc----CCCceEEEEEcCCCCeEEEEe
Q 031406          108 RDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       108 ~~~hi~f~v~d~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~ie~~~  157 (160)
                      +..|++|.|+|+++++++|+++|+++...    ..+.+.+|++|||||.|||+|
T Consensus        81 g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           81 GLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSCCEEEEEECTTCCEEEEEC
T ss_pred             CeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCceEEEEEECCCCCEEEEeC
Confidence            67899999999999999999999998654    346789999999999999986

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.92  E-value=3.5e-24  Score=140.29  Aligned_cols=122  Identities=17%  Similarity=0.263  Sum_probs=95.2

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeec-CCCCCCcceEEEEeCCcEEEEEecCCCCCCCCC-CCCCCCceEEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEAR-PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR-PEHGGRDRHTC  113 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~-~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~-~~~~~~~~hi~  113 (160)
                      |+.+++||+|.|+|+++|++||+ +|||+..... ..+..+....++..++..++|++.......... ...+.+.+|+|
T Consensus         4 M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~g~~hia   82 (133)
T 3hdp_A            4 MSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSPINKTIKKGSTPYHIC   82 (133)
T ss_dssp             CCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETTEEEEEEEESSTTCTHHHHTTTSCEEEEEE
T ss_pred             cceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCCEEEEEEecCCCCChHHHHHhcCCceEEEE
Confidence            56799999999999999999999 9999986542 122334466778888889999987654322100 01156678999


Q ss_pred             EEeCCHHHHHHHHHHCCCeEecc------CCCceEEEEEcCCCCeEEEEee
Q 031406          114 IAIRDVSKLKMILDKAGISYTLS------KSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       114 f~v~d~~~~~~~l~~~G~~~~~~------~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      |.|+|+++++++|+++|+++...      .+|.+.+|++|||||.|||+|.
T Consensus        83 f~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           83 YEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            99999999999999999998643      2467899999999999999983

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.91  E-value=3.7e-23  Score=135.03  Aligned_cols=121  Identities=17%  Similarity=0.257  Sum_probs=96.0

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEE
Q 031406           33 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  112 (160)
Q Consensus        33 ~~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi  112 (160)
                      .+|++.+++|+.|.|+|++++++||+++|||++.....      ...++..++..+.+.......... ......+..|+
T Consensus         4 ~~m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~   76 (133)
T 3ey7_A            4 FLMKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA------GRIALEFGHQKINLHQLGNEFEPK-AQNVRVGSADL   76 (133)
T ss_dssp             CCCCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEETTEEEEEEETTSCCSSC-CTTCCTTCCEE
T ss_pred             eEeEecccCEEEEEECCHHHHHHHHHHccCceEEEecC------CeEEEEcCCEEEEEEcCCCCcccc-CCCCCCCccEE
Confidence            45667899999999999999999999999999887532      347788888889888876443221 11223456899


Q ss_pred             EEEeCC-HHHHHHHHHHCCCeEeccC----C---CceEEEEEcCCCCeEEEEeeCC
Q 031406          113 CIAIRD-VSKLKMILDKAGISYTLSK----S---GRPAIFTRDPDANALEFTQVDG  160 (160)
Q Consensus       113 ~f~v~d-~~~~~~~l~~~G~~~~~~~----~---g~~~~~~~DPdG~~ie~~~~~~  160 (160)
                      +|.|+| +++++++|+++|+++...+    .   +.+.+|++|||||.|||++++.
T Consensus        77 ~~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           77 CFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             EEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             EEEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            999997 9999999999999986532    1   1378999999999999999763

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.91  E-value=1e-23  Score=136.34  Aligned_cols=122  Identities=20%  Similarity=0.253  Sum_probs=92.1

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      ||+.+++|+.|.|+|++++++||+++|||++......+.......++..++..++|+........... ..+.+..|++|
T Consensus         1 M~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~-~~~~g~~~~~~   79 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPARPSY-PEALGLRHLAF   79 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTEEEEEEECTTCCCCCCS-SCCSSCCCEEE
T ss_pred             CcccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCeEEEEEeccCCCCCCCC-CCCccceEEEE
Confidence            45779999999999999999999999999987543211112223557777778888876543221111 12345679999


Q ss_pred             EeCCHHHHHHHHHHCCCeEecc----CCCceEEEEEcCCCCeEEEEe
Q 031406          115 AIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       115 ~v~d~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~ie~~~  157 (160)
                      .|+|+++++++|+++|+++...    ..|.+.+|++|||||.|||+|
T Consensus        80 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           80 KVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             ECSCHHHHHHHHHHTTCCCCCCEECTTTCCEEEEEECTTCCEEEEEC
T ss_pred             EeCCHHHHHHHHHHcCCccccccccCCCCcEEEEEECCCCCEEEeeC
Confidence            9999999999999999998653    245688999999999999986

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.91  E-value=6.9e-23  Score=137.14  Aligned_cols=128  Identities=18%  Similarity=0.240  Sum_probs=96.5

Q ss_pred             CCCceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCC------CCcceEEEEeCC-cEEEEEecCCCCCCCCCC-
Q 031406           32 IRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK------LPYRGAWLWVGA-EMIHLMELPNPDPLSGRP-  103 (160)
Q Consensus        32 ~~~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~------~~~~~~~~~~g~-~~~~l~~~~~~~~~~~~~-  103 (160)
                      ..++++.+|+||.|.|+|++++++||+++|||++......+.      ......++..++ ..++|+......+....+ 
T Consensus        12 ~~~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~   91 (156)
T 3kol_A           12 LAPGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPELSPPDPNPE   91 (156)
T ss_dssp             CCTTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTTCCCSSSSTT
T ss_pred             cCccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCCCCcCCCCCC
Confidence            345678899999999999999999999999999876322111      111346777754 788998876543221111 


Q ss_pred             CCCCCceEEEEEeC--CHHHHHHHHHHCCCeEeccC---CCceEEEEEcCCCCeEEEEeeC
Q 031406          104 EHGGRDRHTCIAIR--DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       104 ~~~~~~~hi~f~v~--d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      ....+..|++|.|+  |+++++++|+++|+++...+   ..++.+||+|||||.|||++.+
T Consensus        92 ~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  152 (156)
T 3kol_A           92 KTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPDGFMIEIRCDP  152 (156)
T ss_dssp             CCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CCEEEEEECTTSCEEEEEECC
T ss_pred             CCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCCccEEEEECCCCCEEEEEecC
Confidence            23455789999999  99999999999999986432   4457999999999999999876

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.91  E-value=1.6e-23  Score=136.60  Aligned_cols=123  Identities=26%  Similarity=0.414  Sum_probs=94.7

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCC---CCCCCCceEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR---PEHGGRDRHT  112 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~---~~~~~~~~hi  112 (160)
                      |+.+++|++|.|+|++++++||+++|||+.......+..+...+++..++..++|+...........   ...+.+..|+
T Consensus         2 m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~hi   81 (134)
T 3rmu_A            2 MLGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIAGFLQKNKAGGMHHI   81 (134)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSSEEEEEEECSTTCTTHHHHHHCTTCEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCEEEEEEecCCCCchhhhhhhccCCCCceEE
Confidence            5789999999999999999999999999987654333334566788888889999886554322100   0123457999


Q ss_pred             EEEeCCHHHHHHHHHHCCCeEeccC-----CCceEEEE--EcCCCCeEEEEee
Q 031406          113 CIAIRDVSKLKMILDKAGISYTLSK-----SGRPAIFT--RDPDANALEFTQV  158 (160)
Q Consensus       113 ~f~v~d~~~~~~~l~~~G~~~~~~~-----~g~~~~~~--~DPdG~~ie~~~~  158 (160)
                      +|.|+|+++++++|+++|+++..++     .+.+.+++  +|||||.|||+|.
T Consensus        82 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           82 CIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            9999999999999999999985542     24456666  7999999999973

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.91  E-value=7.8e-23  Score=132.83  Aligned_cols=119  Identities=20%  Similarity=0.284  Sum_probs=93.9

Q ss_pred             CCceeeeeeeEEEEe--CCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCce
Q 031406           33 RDYGVVSVHHVGILC--ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDR  110 (160)
Q Consensus        33 ~~~~~~~i~hv~l~v--~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~  110 (160)
                      +.|++.+++|+.|.|  +|++++++||+++|||++....... ......|+..++..++|.......        ..+..
T Consensus         4 m~m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~l~l~~~~~~~--------~~~~~   74 (126)
T 2qqz_A            4 MRNYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEEL-KKRGGCWFKCGNQEIHIGVEQNFN--------PAKRA   74 (126)
T ss_dssp             CCCCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGG-GGGCCEEEEETTEEEEEEECTTCC--------CCSSS
T ss_pred             hhcccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccc-cCCCceEEEeCCEEEEEEecCCCC--------CCCce
Confidence            446788999999999  8999999999999999987642210 011237788888888887643211        12358


Q ss_pred             EEEEEeCCHHHHHHHHHHCCCeEeccC--CCceEEEEEcCCCCeEEEEeeCC
Q 031406          111 HTCIAIRDVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVDG  160 (160)
Q Consensus       111 hi~f~v~d~~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~ie~~~~~~  160 (160)
                      |++|.|+|+++++++|+++|+++..++  ++.+.+|++|||||.|||.++.+
T Consensus        75 ~~~f~v~d~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  126 (126)
T 2qqz_A           75 HPAFYVLKIDEFKQELIKQGIEVIDDHARPDVIRFYVSDPFGNRIEFMENKN  126 (126)
T ss_dssp             CEEEEETTHHHHHHHHHHTTCCCEEECSSTTEEEEEEECTTSCEEEEEEECC
T ss_pred             EEEEEcCCHHHHHHHHHHcCCCccCCCCCCCeeEEEEECCCCCEEEEEeCCC
Confidence            999999999999999999999987654  46789999999999999999753

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.90  E-value=6.9e-24  Score=143.21  Aligned_cols=130  Identities=16%  Similarity=0.195  Sum_probs=100.5

Q ss_pred             ccCCCceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCC--------------CCCcceEEEEeCCcEEEEEecCC
Q 031406           30 KEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--------------KLPYRGAWLWVGAEMIHLMELPN   95 (160)
Q Consensus        30 ~~~~~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~--------------~~~~~~~~~~~g~~~~~l~~~~~   95 (160)
                      +.....++.+|+||+|.|+|++++++||+++|||++......+              ......+++..|+..++|++...
T Consensus        10 ~~~~~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~leL~~~~~   89 (159)
T 3gm5_A           10 MSKNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQLELIEPDE   89 (159)
T ss_dssp             CCSSCCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETTEEEEEEEECS
T ss_pred             ccccccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCCEEEEEEEECC
Confidence            3445567789999999999999999999999999876433221              13456678888999999998754


Q ss_pred             CCCCCCC--CCCCCCceEEEEEeCCHHHHHHHHHHCCCeEecc--CCCceEEEEEcCC--CCeEEEEeeC
Q 031406           96 PDPLSGR--PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS--KSGRPAIFTRDPD--ANALEFTQVD  159 (160)
Q Consensus        96 ~~~~~~~--~~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPd--G~~ie~~~~~  159 (160)
                      .......  ...+.++.|+||.|+|+++++++|+++|+++...  ..+.+.+|++|||  |+.|||+|.+
T Consensus        90 ~~~~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~~~g~~~~~~~dpd~~G~~iEl~e~~  159 (159)
T 3gm5_A           90 NPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDFEGGRYAYIDTLRALKVMIELLENY  159 (159)
T ss_dssp             SSCHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEETTEEEEEESCHHHHSSEEEEEEEC
T ss_pred             CCChhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccccCCeeEEEEeccccCcEEEEEEecC
Confidence            3221000  0124567899999999999999999999998654  2567899999999  9999999975

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.90  E-value=1.4e-22  Score=135.69  Aligned_cols=122  Identities=20%  Similarity=0.308  Sum_probs=92.8

Q ss_pred             cCCCceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCce
Q 031406           31 EIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDR  110 (160)
Q Consensus        31 ~~~~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~  110 (160)
                      ...++++.+++||.|.|+|++++++||+++|||++....+      ...++..++..+.|........... .....+..
T Consensus        15 ~~~~m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~~~l~l~~~~~~~~~~~-~~~~~g~~   87 (152)
T 3huh_A           15 ESIQMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGAQKINLHQQEMEFEPKA-SRPTPGSA   87 (152)
T ss_dssp             -----CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEETT------TEEEEEETTEEEEEEETTBCCSSCC-SSCCTTCC
T ss_pred             hcCCcccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC------CeEEEEeCCeEEEEeccCCcCCCcC-cCCCCCcc
Confidence            4456788999999999999999999999999999987532      3477888888888888764322111 12234468


Q ss_pred             EEEEEeC-CHHHHHHHHHHCCCeEeccC----C--C-ceEEEEEcCCCCeEEEEeeC
Q 031406          111 HTCIAIR-DVSKLKMILDKAGISYTLSK----S--G-RPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       111 hi~f~v~-d~~~~~~~l~~~G~~~~~~~----~--g-~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |++|.++ |+++++++|+++|+++...+    .  + .+.+||+|||||.|||++..
T Consensus        88 hi~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  144 (152)
T 3huh_A           88 DLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYV  144 (152)
T ss_dssp             EEEEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC-
T ss_pred             EEEEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecc
Confidence            9999997 99999999999999976432    1  2 48899999999999999865

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.90  E-value=4.8e-23  Score=135.60  Aligned_cols=124  Identities=23%  Similarity=0.188  Sum_probs=92.9

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      |++.+|.|+.|.|+|++++++||+++|||++..........+..+++. ++..+.|.+........ ....+.+..|++|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~~-~~~~~~g~~h~~f   78 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-GGLSIVLREHDGGGTDL-FDETRPGLDHLSF   78 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-TSCEEEEEEETTCSSSC-CCTTSSEEEEEEE
T ss_pred             CCCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-CCCEEEEEeCCCCcccC-CCCCCCCcceEEE
Confidence            467899999999999999999999999999876544222123334444 77788988875432211 1122345689999


Q ss_pred             Ee---CCHHHHHHHHHHCCCeEeccC--CCceEEEEEcCCCCeEEEEeeCC
Q 031406          115 AI---RDVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVDG  160 (160)
Q Consensus       115 ~v---~d~~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~ie~~~~~~  160 (160)
                      .|   +|+++++++|+++|+++..+.  ..++.+||+|||||.|||++..+
T Consensus        79 ~v~~~~d~~~~~~~l~~~G~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           79 SVESMTDLDVLEERLAKAGAAFTPTQELPFGWILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             EESSHHHHHHHHHHHHHHTCCBCCCEEETTEEEEEEECTTCCEEEEEEECT
T ss_pred             EeCCHHHHHHHHHHHHHCCCcccCccccCCceEEEEECCCCCEEEEEEcCC
Confidence            99   899999999999999886432  23489999999999999998764

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.90  E-value=8.1e-24  Score=143.39  Aligned_cols=126  Identities=18%  Similarity=0.281  Sum_probs=96.5

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCC--CCCCCCceEE
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR--PEHGGRDRHT  112 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~--~~~~~~~~hi  112 (160)
                      +++.+|+||+|.|+|+++|++||+++|||++......+..+...+++..++..++|++..........  ...+.++.|+
T Consensus         4 ~~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~Hi   83 (161)
T 3oa4_A            4 EKSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIAKFIQKRGEGIHHI   83 (161)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHCSEEEEE
T ss_pred             cccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCCeEEEEEeECCCCChHHHHhhcCCCCeEEE
Confidence            45679999999999999999999999999987654333344566888889889999987654321100  0124567899


Q ss_pred             EEEeCCHHHHHHHHHHCCCeEecc-C----CCceEEEE--EcCCCCeEEEEeeCC
Q 031406          113 CIAIRDVSKLKMILDKAGISYTLS-K----SGRPAIFT--RDPDANALEFTQVDG  160 (160)
Q Consensus       113 ~f~v~d~~~~~~~l~~~G~~~~~~-~----~g~~~~~~--~DPdG~~ie~~~~~~  160 (160)
                      +|.|+|+++++++|+++|+++..+ +    .|.+.+|+  +|||||.|||++.++
T Consensus        84 af~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~  138 (161)
T 3oa4_A           84 AIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKE  138 (161)
T ss_dssp             EEECSCHHHHHHHHHHTTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCC
T ss_pred             EEEECCHHHHHHHHHHCCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCC
Confidence            999999999999999999998654 2    24455666  399999999999763

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.90  E-value=4e-24  Score=144.08  Aligned_cols=120  Identities=15%  Similarity=0.206  Sum_probs=82.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CC-c-EEEEEecCCCCCC-C-CCCCCCCCceEE
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA-E-MIHLMELPNPDPL-S-GRPEHGGRDRHT  112 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~-~-~~~l~~~~~~~~~-~-~~~~~~~~~~hi  112 (160)
                      ++|.|++|.|+|+++|++||+++|||++....+.+.  .+...+.. ++ . .+.+......... . .....+.+..|+
T Consensus        25 Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~l  102 (155)
T 4g6x_A           25 MRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGA--DRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIPAA  102 (155)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCCSE
T ss_pred             eEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCC--ceEEEEeccCCCcceEEEeccCCCccccccccccccCCceEE
Confidence            478999999999999999999999999876544322  12222332 22 1 2222222211110 0 000112345799


Q ss_pred             EEEeCCHHHHHHHHHHCCCeEeccC---CCceEEEEEcCCCCeEEEEeeC
Q 031406          113 CIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       113 ~f~v~d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      +|.|+|+++++++|+++|+++..++   ++++.++|+|||||.|||+|.+
T Consensus       103 ~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A          103 SFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEEECSSCEEEEEECSSSCEEEEEEC-
T ss_pred             EeeechhhhhhhHHhcCCcEEeeCCEEcCCeEEEEEECCCCCEEEEEEEC
Confidence            9999999999999999999986543   4568899999999999999964

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.90  E-value=1.2e-22  Score=135.06  Aligned_cols=120  Identities=21%  Similarity=0.288  Sum_probs=92.4

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC----cEEEEEecCCCCCCCCCCCCCCCce
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDR  110 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~----~~~~l~~~~~~~~~~~~~~~~~~~~  110 (160)
                      |++.+++|+.|.|+|++++++||+++|||++......+...+..+++..++    ..++|.........    ..+.+..
T Consensus         4 m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~----~~~~~~~   79 (144)
T 2c21_A            4 MPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSY----KHDEAYG   79 (144)
T ss_dssp             --CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCC----CCCSSEE
T ss_pred             CccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCC----CCCCCce
Confidence            567899999999999999999999999999876443222233456777764    57888876542211    1234568


Q ss_pred             EEEEEeCCHHHHHHHHHHCCCeEeccCCCceEE-EEEcCCCCeEEEEeeC
Q 031406          111 HTCIAIRDVSKLKMILDKAGISYTLSKSGRPAI-FTRDPDANALEFTQVD  159 (160)
Q Consensus       111 hi~f~v~d~~~~~~~l~~~G~~~~~~~~g~~~~-~~~DPdG~~ie~~~~~  159 (160)
                      |++|.|+|+++++++|+++|+++..+ .+.+.+ ||+|||||.|||++..
T Consensus        80 h~~f~v~d~~~~~~~l~~~G~~~~~~-~g~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           80 HIAIGVEDVKELVADMRKHDVPIDYE-DESGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEE-CSSSSEEEEECTTSCEEEEEEHH
T ss_pred             EEEEEeCCHHHHHHHHHHCCCEEecc-CCcEEEEEEECCCCCEEEEEEcC
Confidence            99999999999999999999998877 565555 9999999999999853

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.89  E-value=2.6e-22  Score=130.06  Aligned_cols=117  Identities=20%  Similarity=0.286  Sum_probs=90.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCCCCCCCCCCCCCCCceEEEEEe
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  116 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  116 (160)
                      ++++|+.|.|+|++++++||+++|||+.......+..+...+|+.. ++..++|+..........  ..+.+..|++|.|
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~--~~~~g~~hi~~~v   79 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTGKTT--GENLGWAHIAIST   79 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEETTCCCCCC--SSCSSCCCEEEEC
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecCCCCCCCC--cCCCceEEEEEEc
Confidence            3789999999999999999999999998765332233345567776 466888888764432211  1344568999999


Q ss_pred             CC---HHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEE
Q 031406          117 RD---VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFT  156 (160)
Q Consensus       117 ~d---~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~  156 (160)
                      +|   +++++++|+++|+++...+    .+.+.++++|||||.|||+
T Consensus        80 ~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           80 GTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             CCHHHHHHHHHHHHHcCCeEecCcccCCCCcEEEEEECCCCCEEEEe
Confidence            99   8899999999999986532    4568899999999999996

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.89  E-value=1.2e-21  Score=128.20  Aligned_cols=117  Identities=21%  Similarity=0.344  Sum_probs=89.3

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC----cEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~----~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      +++|+.|.|+|++++++||+++|||++......+...+..+++..++    ..++|........    ...+.+..|++|
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~~~~~   77 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDK----YELGTAYGHIAL   77 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCC----CCCCSSEEEEEE
T ss_pred             cceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCc----ccCCCCccEEEE
Confidence            68999999999999999999999999876543233334456777754    5788776433221    112345689999


Q ss_pred             EeCCHHHHHHHHHHCCCeEeccC----CCc-eEEEEEcCCCCeEEEEeeC
Q 031406          115 AIRDVSKLKMILDKAGISYTLSK----SGR-PAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       115 ~v~d~~~~~~~l~~~G~~~~~~~----~g~-~~~~~~DPdG~~ie~~~~~  159 (160)
                      .|+|+++++++|+++|+++..++    .|. +.++++|||||.|||++..
T Consensus        78 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  127 (135)
T 1f9z_A           78 SVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  127 (135)
T ss_dssp             ECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-
T ss_pred             EeCCHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecC
Confidence            99999999999999999987542    343 6789999999999999864

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.89  E-value=5.4e-22  Score=131.64  Aligned_cols=113  Identities=27%  Similarity=0.448  Sum_probs=86.8

Q ss_pred             cCCCceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC--cEEEEEecCCCCCCCCCCCCCCC
Q 031406           31 EIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGR  108 (160)
Q Consensus        31 ~~~~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~--~~~~l~~~~~~~~~~~~~~~~~~  108 (160)
                      ...+|++.+|+||.|.|+|++++++||+++|||++....+..    ...++..++  ..+.|.+....          .+
T Consensus        20 ~~~~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~----~~~~~~~~~~~~~l~l~~~~~~----------~~   85 (141)
T 3ghj_A           20 QGVPMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSAR----RWNFLWVSGRAGMVVLQEEKEN----------WQ   85 (141)
T ss_dssp             ------CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTT----TEEEEEETTTTEEEEEEECCSS----------CC
T ss_pred             ccCceeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCC----cEEEEEecCCCcEEEEeccCCC----------CC
Confidence            445677889999999999999999999999999998764321    346677653  56777766321          22


Q ss_pred             ceEEEEEeC--CHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEe
Q 031406          109 DRHTCIAIR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       109 ~~hi~f~v~--d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~  157 (160)
                      ..|++|.|+  |+++++++|+++|+++..+.    .+.+.+||+|||||.|||++
T Consensus        86 ~~h~~~~v~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           86 QQHFSFRVEKSEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             CCEEEEEECGGGHHHHHHHHHHTTCCCEEEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             CceEEEEEeHHHHHHHHHHHHHCCCeEeCCcccCCCCceEEEEECCCCCEEEEEE
Confidence            579999997  99999999999999987432    35689999999999999986

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.88  E-value=1.3e-21  Score=130.62  Aligned_cols=118  Identities=18%  Similarity=0.298  Sum_probs=90.5

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEE
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  113 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~  113 (160)
                      ++++.+|+||.|.|+|++++++||+++|||++....+      ...++..++..+.|........+... ....+..|++
T Consensus        22 ~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~g~~~l~l~~~~~~~~~~~~-~~~~g~~~~~   94 (147)
T 3zw5_A           22 SMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE------DRKALCFGDQKFNLHEVGKEFEPKAA-HPVPGSLDIC   94 (147)
T ss_dssp             HTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEETTEEEEEEETTSCCSSCCS-SCCTTCCEEE
T ss_pred             ceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecCC------CceEEEECCcEEEEEEcCCCcCcccC-CCCCCCceEE
Confidence            4568899999999999999999999999999885432      23667788888888876543221111 1122347899


Q ss_pred             EEeC-CHHHHHHHHHHCCCeEeccC-----C-C-ceEEEEEcCCCCeEEEEee
Q 031406          114 IAIR-DVSKLKMILDKAGISYTLSK-----S-G-RPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       114 f~v~-d~~~~~~~l~~~G~~~~~~~-----~-g-~~~~~~~DPdG~~ie~~~~  158 (160)
                      |.+. |+++++++|+++|+++...+     . + .+.+||+|||||.|||+++
T Consensus        95 ~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~y  147 (147)
T 3zw5_A           95 LITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSNY  147 (147)
T ss_dssp             EECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEEC
T ss_pred             EEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEecC
Confidence            9886 99999999999999886432     1 1 3689999999999999985

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.88  E-value=1.5e-21  Score=127.35  Aligned_cols=120  Identities=22%  Similarity=0.261  Sum_probs=88.8

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeC--CcEEEEEecCCCCCCCCCCCCCCCce
Q 031406           33 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDR  110 (160)
Q Consensus        33 ~~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g--~~~~~l~~~~~~~~~~~~~~~~~~~~  110 (160)
                      ..+|+.+++|+.|.|+|++++++||+++|||++......+. +.....+..+  +..+.+.........    ...++..
T Consensus         7 ~~~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~~----~~~~~~~   81 (133)
T 4hc5_A            7 GSLMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDP-NMRFVTVVPPGAQTQVALGLPSWYEDG----RKPGGYT   81 (133)
T ss_dssp             -CCSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEET-TEEEEEEECTTCSCEEEEECGGGCSSC----CCSCEEE
T ss_pred             ccccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCC-CceEEEEECCCCceEEEEecCcccccc----cCCCCeE
Confidence            44567899999999999999999999999999887543111 1222334443  346777665421111    1124468


Q ss_pred             EEEEEeCCHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEe
Q 031406          111 HTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       111 hi~f~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~  157 (160)
                      |++|.|+|+++++++|+++|+++..++    .|.+.++++|||||.|||+|
T Consensus        82 ~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           82 GISLITRDIDEAYKTLTERGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCEESSSCEECTTSCEEEEEECTTCEEEEEEE
T ss_pred             EEEEEeCCHHHHHHHHHHCCCEeecCCCcCCCCCEEEEEECCCCCEEEEEe
Confidence            999999999999999999999997532    45599999999999999987

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.88  E-value=3e-21  Score=126.88  Aligned_cols=112  Identities=22%  Similarity=0.369  Sum_probs=90.9

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  115 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  115 (160)
                      |+.+++|+.|.|+|++++++||+++|||++....+      ...++..++..+.+......      +....+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~------~~~~~~~~h~~~~   68 (135)
T 1nki_A            1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQY------GGPAADYTHYAFG   68 (135)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEEETTEEEEEEECTTC------CCCCSSSCEEEEE
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC------CceEEecCCEEEEEEeCCCC------CCCCCCcceEEEE
Confidence            46799999999999999999999999999876532      23677888888888775321      1122346899999


Q ss_pred             eC--CHHHHHHHHHHCCCeEeccC-CCceEEEEEcCCCCeEEEEeeC
Q 031406          116 IR--DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       116 v~--d~~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |+  |+++++++|+++|+++..++ .+++.++++|||||.|||.+.+
T Consensus        69 v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           69 IAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCSSSCEEEEECTTCCEEEEESCC
T ss_pred             ccHHHHHHHHHHHHHCCCceecCCCCCeEEEEEECCCCCEEEEEECC
Confidence            98  99999999999999987653 4678999999999999999864

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.88  E-value=2.9e-21  Score=127.83  Aligned_cols=115  Identities=23%  Similarity=0.366  Sum_probs=92.0

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  115 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  115 (160)
                      |+.+++|+.|.|+|++++++||+++|||++.....      ...++..++..+.|........   .+....+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~~~hi~~~   71 (141)
T 1npb_A            1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEARQY---VPPQESDYTHYAFT   71 (141)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEETTEEEEEEECTTCCC---CCGGGSCSCEEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC------CcEEEEECCEEEEEEECCCCCC---CCCCCCCceEEEEE
Confidence            46789999999999999999999999999876542      2367788888888877653211   11223446899999


Q ss_pred             eC--CHHHHHHHHHHCCCeEeccC-CCceEEEEEcCCCCeEEEEeeC
Q 031406          116 IR--DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       116 v~--d~~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |+  |+++++++|+++|+++...+ .+++.++++|||||.|||++.+
T Consensus        72 v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           72 VAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCCSSSEEEEEECTTCCEEEEEECC
T ss_pred             eCHHHHHHHHHHHHHCCCeEeccCCCceeEEEEECCCCCEEEEEECc
Confidence            96  99999999999999987644 4678999999999999999864

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.88  E-value=8.9e-22  Score=136.11  Aligned_cols=125  Identities=15%  Similarity=0.200  Sum_probs=93.7

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC-------------------cEEEEEecCC
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-------------------EMIHLMELPN   95 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~-------------------~~~~l~~~~~   95 (160)
                      ....+|+|++|.|+|++++++||+++|||++......+...+..+++..++                   ..++|.....
T Consensus        30 ~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  109 (187)
T 3vw9_A           30 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG  109 (187)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETT
T ss_pred             cceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecC
Confidence            345689999999999999999999999999987655444455666676643                   4788855432


Q ss_pred             CC-CCCCCC----CCCCCceEEEEEeCCHHHHHHHHHHCCCeEeccC---CCceEEEEEcCCCCeEEEEeeC
Q 031406           96 PD-PLSGRP----EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus        96 ~~-~~~~~~----~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      .. ......    ....++.|++|.|+|+++++++|+++|+++...+   ..++.+||+|||||.|||+|..
T Consensus       110 ~~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          110 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             GGGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECGG
T ss_pred             CCCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcceEEEEECCCCCEEEEEEcc
Confidence            21 110111    1123578999999999999999999999997754   2345689999999999999864

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.88  E-value=4.2e-21  Score=125.73  Aligned_cols=113  Identities=19%  Similarity=0.152  Sum_probs=87.5

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      .+.+++|+.|.|+|++++++||+++|||++....+      ....+.. ++..+.|+.......     ....+..|++|
T Consensus        10 ~~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~l~l~~~~~~~~-----~~~~~~~~~~~   78 (132)
T 3sk2_A           10 PTITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP------RYVAFPSSGDALFAIWSGGEEPV-----AEIPRFSEIGI   78 (132)
T ss_dssp             CCCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS------SEEEEECSTTCEEEEESSSCCCC-----TTSCCCEEEEE
T ss_pred             CcceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC------CEEEEEcCCCcEEEEEeCCCCCc-----CCCCCcceEEE
Confidence            45689999999999999999999999999876533      2244554 457888887652211     11234589999


Q ss_pred             EeCC---HHHHHHHHHH---CCCeEeccC---CCceEEEEEcCCCCeEEEEeeC
Q 031406          115 AIRD---VSKLKMILDK---AGISYTLSK---SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       115 ~v~d---~~~~~~~l~~---~G~~~~~~~---~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      .|+|   +++++++|++   +|+++..++   ..++.++|+|||||.|||++++
T Consensus        79 ~v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g~~~~~~DPdGn~iel~~~d  132 (132)
T 3sk2_A           79 MLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTFLISDPDGHIIRVCPLD  132 (132)
T ss_dssp             EESSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTEEEEEEECTTCCEEEEEECC
T ss_pred             EeCCHHHHHHHHHHHHhhhcCCCEEeeCCcccCceEEEEEECCCCCEEEEEeCC
Confidence            9986   9999999999   999987542   2348999999999999999875

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.88  E-value=2.3e-21  Score=128.01  Aligned_cols=116  Identities=15%  Similarity=0.257  Sum_probs=88.9

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCc-ceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-RGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~-~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      |+.+|+|+.|.|+|++++++||+++|||++....+...... ...++..++..+++.......        ..+..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~--------~~~~~h~~~   72 (139)
T 1r9c_A            1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLA--------ERSYNHIAF   72 (139)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCCS--------SCCSCEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCCccccccceEEEEECCEEEEEEeCCCCC--------CCCeeEEEE
Confidence            46799999999999999999999999999876543211110 112677788788887643211        234689999


Q ss_pred             EeC--CHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEeeC
Q 031406          115 AIR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       115 ~v~--d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      .|+  |+++++++|+++|+++..++    ++.+.+||+|||||.|||.+.+
T Consensus        73 ~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           73 KIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECCC
T ss_pred             EcCHHHHHHHHHHHHHCCCcccCCcccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            999  99999999999999987543    3578999999999999999853

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.88  E-value=3.3e-21  Score=128.62  Aligned_cols=123  Identities=14%  Similarity=0.221  Sum_probs=91.9

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCC-----------CCCCcceEEEEeCC--cEEEEEecCCCCCC---
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPH-----------DKLPYRGAWLWVGA--EMIHLMELPNPDPL---   99 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~-----------~~~~~~~~~~~~g~--~~~~l~~~~~~~~~---   99 (160)
                      ++.+++|+.|.|+|++++++||++ |||++......           +......+++..++  ..++|++.......   
T Consensus         8 ~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~   86 (153)
T 1ss4_A            8 KLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADH   86 (153)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBC
T ss_pred             cccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCCCCcccc
Confidence            567999999999999999999999 99998754321           11233456777743  68888875322211   


Q ss_pred             CCCCCCCCCceEEEEEeCCHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEeeC
Q 031406          100 SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       100 ~~~~~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      ......+.+..|++|.|+|+++++++|+++|+++..++    ++.+.+||+|||||.|||++..
T Consensus        87 ~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           87 RTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             TTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEEC
T ss_pred             cCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCceEEEEEECCCCCEEEEEecc
Confidence            01112234567999999999999999999999986543    4668899999999999999864

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.88  E-value=3.2e-22  Score=135.40  Aligned_cols=121  Identities=17%  Similarity=0.305  Sum_probs=93.0

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCC----CCCCCCCCCCc
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP----LSGRPEHGGRD  109 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~----~~~~~~~~~~~  109 (160)
                      ++++.++.||.|.|+|++++++||+++|||++......     ..+++..++..+.+........    .......+.+.
T Consensus         3 m~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~g~   77 (160)
T 3r4q_A            3 MKPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCGRQMLLLFDPQESSRADANNPIPRHGAVGQ   77 (160)
T ss_dssp             -CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEETTEEEEEECHHHHTCCCTTCCSCCCEEEEE
T ss_pred             ccccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCCCEEEEEEecCCccCccccCCCCcCCCcce
Confidence            34678999999999999999999999999999875431     3467777887777776432211    01111223345


Q ss_pred             eEEEEEe---CCHHHHHHHHHHCCCeEecc---CCCceEEEEEcCCCCeEEEEeeC
Q 031406          110 RHTCIAI---RDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       110 ~hi~f~v---~d~~~~~~~l~~~G~~~~~~---~~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      .|++|.|   +|+++++++|+++|+++..+   +.+++.+|++|||||.|||++.+
T Consensus        78 ~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (160)
T 3r4q_A           78 GHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRDPAGNSVEVGEGK  133 (160)
T ss_dssp             CEEEEEESSHHHHHHHHHHHHTTTCCCCEEEECTTSCEEEEEECTTCCEEEEEEGG
T ss_pred             eEEEEEeCCHHHHHHHHHHHHHCCCEEeccccccCCcEEEEEECCCCCEEEEEeCC
Confidence            8999999   89999999999999998643   24789999999999999999865

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.87  E-value=4.4e-21  Score=125.34  Aligned_cols=114  Identities=19%  Similarity=0.267  Sum_probs=82.4

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEE-eCCcEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~-~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      +...|+||.|.|+|++++++||++ |||++...... ..  ...++. .++..+.|.......      .......|++|
T Consensus         3 ~~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~-~~--~~~~~~~~~~~~l~l~~~~~~~------~~~~~~~~l~f   72 (128)
T 3g12_A            3 LSLLITSITINTSHLQGMLGFYRI-IGFQFTASKVD-KG--SEVHRAVHNGVEFSLYSIQNPQ------RSQIPSLQLGF   72 (128)
T ss_dssp             -CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC--------CCEEEEEETTEEEEEEECCCCS------SCCCCSEEEEE
T ss_pred             ccceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCC-CC--CEEEEEeCCCeEEEEEECCCCc------CCCCCceEEEE
Confidence            456899999999999999999999 99998764221 11  225555 577778876554321      11223468999


Q ss_pred             EeCCHHHHHHHHHHCCCe-Eecc----CCCceEEEEEcCCCCeEEEEeeCC
Q 031406          115 AIRDVSKLKMILDKAGIS-YTLS----KSGRPAIFTRDPDANALEFTQVDG  160 (160)
Q Consensus       115 ~v~d~~~~~~~l~~~G~~-~~~~----~~g~~~~~~~DPdG~~ie~~~~~~  160 (160)
                      .|+|+++++++|+++|++ +..+    +.|.+ ++|+|||||.|||.+.++
T Consensus        73 ~v~dvd~~~~~l~~~G~~~~~~~p~~~~~G~~-~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           73 QITDLEKTVQELVKIPGAMCILDPTDMPDGKK-AIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             EESCHHHHHHHHTTSTTCEEEEEEEECC-CEE-EEEECTTCCEEEEEC---
T ss_pred             EeCCHHHHHHHHHHCCCceeccCceeCCCccE-EEEECCCCCEEEEEEecc
Confidence            999999999999999999 6533    24555 999999999999998753

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.87  E-value=5.1e-21  Score=125.12  Aligned_cols=116  Identities=16%  Similarity=0.269  Sum_probs=88.0

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCc-ceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-RGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~-~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      |+.+++|+.|.|+|++++++||+++|||++....+...... ...++..++..+.+.......        ..+..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--------~~~~~h~~~   72 (133)
T 2p7o_A            1 MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDSLQ--------ERTYNHIAF   72 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEECC-----CCCSSCEEEEEETTEEEEEEECSSCC--------CCCSCEEEE
T ss_pred             CCceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecCCcccccCCceEEEeCCEEEEEecCCCCC--------CCCeeEEEE
Confidence            46789999999999999999999999999876432111100 112677788788887643211        234689999


Q ss_pred             EeC--CHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEeeC
Q 031406          115 AIR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       115 ~v~--d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      .|+  |+++++++|+++|+++..++    ++++.+|++|||||.|||++.+
T Consensus        73 ~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           73 QIQSEEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCEECCCCCCTTCCCEEEEECSSSCEEEEECSS
T ss_pred             EcCHHHHHHHHHHHHHCCCcccCCCccCCCCeeEEEEECCCCCEEEEEcCC
Confidence            994  99999999999999987653    3568999999999999999864

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.87  E-value=4.7e-21  Score=128.24  Aligned_cols=115  Identities=18%  Similarity=0.190  Sum_probs=85.9

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      |+.++.|+.|.|+|++++++||+++|||++....+      ..+++.. ++..+.|+........   +....+..|++|
T Consensus         3 m~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~~~~~~g~~l~l~~~~~~~~~---~~~~~~~~~l~f   73 (148)
T 3rhe_A            3 MLSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP------TFAMFVMKTGLRLGLWAQEEIEPK---AHQTGGGMELSF   73 (148)
T ss_dssp             ----CEEEEEEESCHHHHHHHHHHHHTCCCSEECS------SEEEEECTTSCEEEEEEGGGCSSC---CC----CEEEEE
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC------CEEEEEcCCCcEEEEecCCcCCcc---ccCCCCeEEEEE
Confidence            56789999999999999999999999999876532      2356776 6778888776433221   111233579999


Q ss_pred             EeCC---HHHHHHHHHHCCCeEeccC---CCceEEEEEcCCCCeEEEEeeC
Q 031406          115 AIRD---VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       115 ~v~d---~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      .|+|   +++++++|+++|+++..++   ..++.++|+|||||.|||++..
T Consensus        74 ~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G~~~~~~DPdG~~iel~~~~  124 (148)
T 3rhe_A           74 QVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRIFCLK  124 (148)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCCEEEEEEEETTEEEEEEECTTCCEEEEEEEC
T ss_pred             EcCCHHHHHHHHHHHHhCCCEEEeCCeecCCCcEEEEECCCCCEEEEEEcC
Confidence            9987   9999999999999986532   2248899999999999999875

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.87  E-value=6.8e-22  Score=132.29  Aligned_cols=119  Identities=17%  Similarity=0.124  Sum_probs=90.3

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCC-CCCCCceEEE
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRP-EHGGRDRHTC  113 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~-~~~~~~~hi~  113 (160)
                      ||+.++.|+.|.|+|++++++||+++|||++....+      ...++..++..+.|............+ ..+.+..|++
T Consensus         1 MM~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~   74 (150)
T 3bqx_A            1 MSLQQVAVITLGIGDLEASARFYGEGFGWAPVFRNP------EIIFYQMNGFVLATWLVQNLQEDVGVAVTSRPGSMALA   74 (150)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEECS------SEEEEECSSSEEEEEEHHHHHHHHSSCCCSSCCSCEEE
T ss_pred             CCccceEEEEEEcCCHHHHHHHHHHhcCCEeecCCC------CEEEEEcCCEEEEEEeccccccccCCCCCCCCCeEEEE
Confidence            456789999999999999999999999999876431      346677788888888764210000000 0123457999


Q ss_pred             EEe---CCHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEeeC
Q 031406          114 IAI---RDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       114 f~v---~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |.|   +|+++++++|+++|+++..++    .|.+.+||+|||||.|||.+.+
T Consensus        75 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  127 (150)
T 3bqx_A           75 HNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDGHIWEIAFNP  127 (150)
T ss_dssp             EECSSGGGHHHHHHHHHHTTCEEEEEEECCTTSSEEEEEECTTCCEEEEEECT
T ss_pred             EEeCCHHHHHHHHHHHHHCCCEEecCCcccCCCCEEEEEECCCCCEEEEEeCC
Confidence            999   899999999999999986532    3568999999999999999875

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.87  E-value=5e-22  Score=131.95  Aligned_cols=124  Identities=15%  Similarity=0.247  Sum_probs=92.6

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC------cEEEEEecCCCCCCCC--CCCCC-
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA------EMIHLMELPNPDPLSG--RPEHG-  106 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~------~~~~l~~~~~~~~~~~--~~~~~-  106 (160)
                      |+.+++|+.|.|+|++++++||+++|||++......+..+...+++..++      ..++|++.........  ....+ 
T Consensus         6 m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~   85 (148)
T 1jc4_A            6 LFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNG   85 (148)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTT
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCCC
Confidence            56799999999999999999999999999876543222234557788876      6788888654321100  00122 


Q ss_pred             -CCceEEEEEeCCHHHHHHHHHHCCCeEe-ccC----CCceEEEE--EcCCCCeEEEEeeC
Q 031406          107 -GRDRHTCIAIRDVSKLKMILDKAGISYT-LSK----SGRPAIFT--RDPDANALEFTQVD  159 (160)
Q Consensus       107 -~~~~hi~f~v~d~~~~~~~l~~~G~~~~-~~~----~g~~~~~~--~DPdG~~ie~~~~~  159 (160)
                       .+..|++|.|+|+++++++|+++|+++. ..+    .+.+.+++  +|||||.|||++.+
T Consensus        86 ~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           86 RAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCceEEEEEeecCCCcEEEEEEecC
Confidence             4468999999999999999999999987 322    34455666  89999999999875

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.86  E-value=1.2e-20  Score=121.04  Aligned_cols=111  Identities=18%  Similarity=0.246  Sum_probs=84.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeC
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  117 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~  117 (160)
                      +++.|+.|.|+|++++++||+++|||++....+      ..+++..++..+.+.... ..+.   ...+.+ .|++|.|+
T Consensus         4 m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~~-~~~~---~~~~~~-~~~~~~v~   72 (118)
T 2i7r_A            4 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGSHCLMLSQNH-LVPL---ENFQSG-IIIHIEVE   72 (118)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETTEEEEEESSC-SSSC---CCCCSC-EEEEEECS
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC------CEEEEEeCCeEEEEEcCC-CCCc---ccCCCe-EEEEEEEC
Confidence            478999999999999999999999999875322      136677777766553221 1110   111223 58999999


Q ss_pred             CHHHHHHHHHHCCCeEecc----CCCceEEEEEcCCCCeEEEEeeC
Q 031406          118 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       118 d~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |+++++++|+++|+++..+    +.|.+.++++|||||.|||++.+
T Consensus        73 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  118 (118)
T 2i7r_A           73 DVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRMK  118 (118)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEECC
T ss_pred             CHHHHHHHHHHCCCceecCCccccCccEEEEEECCCccEEEEEecC
Confidence            9999999999999998543    24568999999999999999864

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.86  E-value=3.1e-20  Score=121.74  Aligned_cols=113  Identities=22%  Similarity=0.254  Sum_probs=85.5

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  115 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  115 (160)
                      ...+++||.|.|+|++++++||+++|||++....+      ....+..++..+.+........+     ......|++|.
T Consensus         6 ~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~g~~~~l~~~~~~~~~-----~~~~~~h~~~~   74 (135)
T 3rri_A            6 NPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP------DRITLDFFGDQLVCHLSDRWDRE-----VSMYPRHFGIT   74 (135)
T ss_dssp             CTTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETTEEEEEEECSCSCSS-----CCSSSCEEEEE
T ss_pred             CCCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC------CcEEEEEeCCEEEEEEcCccccc-----CCCCCCeEEEE
Confidence            34689999999999999999999999999865432      23555655666666665433211     12335799999


Q ss_pred             eC---CHHHHHHHHHHCCCeEecc--------CCCceEEEEEcCCCCeEEEEeeC
Q 031406          116 IR---DVSKLKMILDKAGISYTLS--------KSGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       116 v~---d~~~~~~~l~~~G~~~~~~--------~~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      +.   |+++++++|+++|+++..+        +++.+.+||+|||||.|||.++.
T Consensus        75 ~~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~  129 (135)
T 3rri_A           75 FRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYF  129 (135)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEES
T ss_pred             EcChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEEC
Confidence            86   5999999999999988542        22347899999999999999875

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.86  E-value=7.5e-21  Score=131.26  Aligned_cols=127  Identities=16%  Similarity=0.205  Sum_probs=91.0

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeC-------------------CcEEEEEec
Q 031406           33 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-------------------AEMIHLMEL   93 (160)
Q Consensus        33 ~~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g-------------------~~~~~l~~~   93 (160)
                      ..+.+.+++|+.|.|+|++++++||+++|||++......+...+..+++..+                   +..++|+..
T Consensus        25 ~~~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~  104 (184)
T 2za0_A           25 PSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHN  104 (184)
T ss_dssp             GGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEE
T ss_pred             CCccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEec
Confidence            3345679999999999999999999999999987643222222334455543                   357888765


Q ss_pred             CCCC-CCCCC----CCCCCCceEEEEEeCCHHHHHHHHHHCCCeEeccC---CCceEEEEEcCCCCeEEEEeeC
Q 031406           94 PNPD-PLSGR----PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus        94 ~~~~-~~~~~----~~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      .... .....    .....+..|++|.|+|+++++++|+++|+++...+   .+++.+||+|||||.|||++..
T Consensus       105 ~~~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~~~~~~~DPdG~~iel~~~~  178 (184)
T 2za0_A          105 WGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  178 (184)
T ss_dssp             TTGGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             CCCCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCceeEEEEECCCCCEEEEEecC
Confidence            4311 11000    01113468999999999999999999999987653   2356799999999999999864

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.86  E-value=3.9e-21  Score=126.78  Aligned_cols=120  Identities=20%  Similarity=0.240  Sum_probs=88.1

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCCCC--CCCCCCCCCCCceEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPD--PLSGRPEHGGRDRHT  112 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~~~--~~~~~~~~~~~~~hi  112 (160)
                      |+.++.|+.|.|+|++++++||++ |||++....+..    ....+.. ++..+.+.......  .+...+..+.+..|+
T Consensus         1 M~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~~----~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l   75 (138)
T 2a4x_A            1 MSARISLFAVVVEDMAKSLEFYRK-LGVEIPAEADSA----PHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAI   75 (138)
T ss_dssp             -CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGGGC----SEEEEECTTSCEEEEEEHHHHHHHCTTCCCCBSSCSEEE
T ss_pred             CcceeeEEEEEECCHHHHHHHHHH-cCCcEEecCCCC----ceEEEEcCCCeEEEEecCccchhhCcccCCCCCCCeEEE
Confidence            346899999999999999999998 999987643211    1344555 66678887642100  000011223456899


Q ss_pred             EEEeC---CHHHHHHHHHHCCCeEecc----CCCceEEEEEcCCCCeEEEEeeCC
Q 031406          113 CIAIR---DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  160 (160)
Q Consensus       113 ~f~v~---d~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~ie~~~~~~  160 (160)
                      +|.|+   |+++++++|+++|+++..+    +.|.+.+||+|||||.|||++..|
T Consensus        76 ~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  130 (138)
T 2a4x_A           76 AFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPLP  130 (138)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEECTTCCEEEEEEECT
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCceeeCCcccCCCcEEEEEECCCCCEEEEEeCCc
Confidence            99999   9999999999999998653    245689999999999999998754

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.86  E-value=5.3e-20  Score=121.08  Aligned_cols=115  Identities=19%  Similarity=0.237  Sum_probs=87.7

Q ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCce-EEEEEeCCH
Q 031406           41 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDR-HTCIAIRDV  119 (160)
Q Consensus        41 ~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~-hi~f~v~d~  119 (160)
                      ..+.|.|+|++++++||+++|||++....+.+ .......+..++..+.|.........   ...++... |++|.|+|+
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~v~dv   79 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTGGGIVMVRRTGEPYTV---SCAGGHTCKQVIVWVSDV   79 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECSSSEEEEEETTCCSSC---EECCCCCCCEEEEEESCH
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecCCeEEEEEecCCCcCc---cCCCCCcEEEEEEEeCCH
Confidence            56899999999999999999999998765433 22334666778888888765322111   11122234 999999999


Q ss_pred             HHHHHHHHHCCCeEecc----CCCceEEEEEcCCCCeEEEEeeC
Q 031406          120 SKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       120 ~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      ++++++|+++|+++..+    +.+.+.++|+|||||.|||++..
T Consensus        80 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  123 (137)
T 3itw_A           80 DEHFMRSTAAGADIVQPLQDKPWGLRQYLVRDLEGHLWEFTRHL  123 (137)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEETTTEEEEEEECSSSCEEEEEECC
T ss_pred             HHHHHHHHHcCCeeccCccccCCCcEEEEEECCCCCEEEEEEEc
Confidence            99999999999998654    24669999999999999999863

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.85  E-value=2.7e-20  Score=123.91  Aligned_cols=114  Identities=16%  Similarity=0.215  Sum_probs=88.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeC-CcEEEEEecCCCCCCCCCCCCCCCceEEEEEe
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  116 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g-~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  116 (160)
                      .++.|+.|.|+|++++++||+++|||++....+      ...++..+ +..+.|+......+.   +..+.+..|++|.|
T Consensus        24 ~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~l~l~~~~~~~~~---~~~~~~~~hl~f~v   94 (144)
T 2kjz_A           24 THPDFTILYVDNPPASTQFYKALLGVDPVESSP------TFSLFVLANGMKLGLWSRHTVEPK---ASVTGGGGELAFRV   94 (144)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET------TEEEEECTTSCEEEEEETTSCSSC---CCCSSSSCEEEEEC
T ss_pred             CceeEEEEEeCCHHHHHHHHHHccCCEeccCCC------CeEEEEcCCCcEEEEEeCCCCCCc---cCCCCCceEEEEEe
Confidence            489999999999999999999999999876542      23566775 567888765432211   12234568999999


Q ss_pred             C---CHHHHHHHHHHCCCeEeccC---CCceEEEEEcCCCCeEEEEeeCC
Q 031406          117 R---DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVDG  160 (160)
Q Consensus       117 ~---d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~ie~~~~~~  160 (160)
                      +   |+++++++|+++|+++..++   ..++.+||+|||||.|||+++.+
T Consensus        95 ~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~g  144 (144)
T 2kjz_A           95 ENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLRVYAFAG  144 (144)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCSCCEEETTEEEEEECCTTCCEEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHCCCeEecCceecCCceEEEEECCCCCEEEEEecCC
Confidence            7   58999999999999886543   23588999999999999999764

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.85  E-value=6.6e-20  Score=118.83  Aligned_cols=110  Identities=11%  Similarity=0.119  Sum_probs=85.7

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  115 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  115 (160)
                      +.....|+.|.|+|++++++||+++|||++....+      ...++..++..++|.......        .+...|++|.
T Consensus         2 ~~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~--------~~~~~~~~~~   67 (124)
T 1xrk_A            2 AKLTSAVPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQV--------VPDNTQAWVW   67 (124)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCTT--------TGGGCEEEEE
T ss_pred             CcccceeEEEEcCCHHHHHHHHHHccCceEEecCC------CEEEEEECCEEEEEEcCCCCC--------CCCceEEEEE
Confidence            34567899999999999999999999999886521      235567788788887654311        1224699999


Q ss_pred             eCCHHHHHHHHHHC------CC--eEeccC---CCceEEEEEcCCCCeEEEEeeC
Q 031406          116 IRDVSKLKMILDKA------GI--SYTLSK---SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       116 v~d~~~~~~~l~~~------G~--~~~~~~---~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |+|+++++++|+++      |+  ++..++   ..++.++++|||||.|||.+..
T Consensus        68 v~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           68 VRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             EECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEEC-
T ss_pred             ECCHHHHHHHHHHhcccccCCccccccCCceecCCCCEEEEECCCCCEEEEEEec
Confidence            99999999999999      99  765432   2238999999999999999863

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.85  E-value=1.9e-20  Score=124.72  Aligned_cols=115  Identities=14%  Similarity=0.223  Sum_probs=83.9

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEE
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  113 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~  113 (160)
                      +|++.++. +.|.|+|++++++||+++|||++......+....  .....++  ++++........      ..+..|++
T Consensus         2 mM~i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~--~~~~~~~--~~l~~~~~~~~~------~~~~~hl~   70 (144)
T 3r6a_A            2 VMKILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGV--ELAQIST--ILLIAGSEEALK------PFRNTQAT   70 (144)
T ss_dssp             -CCEEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSC--EEEEETT--EEEEESCHHHHG------GGGGCCEE
T ss_pred             eEEEEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccE--EEEEecc--EEEecCCcccCC------CCcceEEE
Confidence            35577777 9999999999999999999999876543222222  2233344  555554321110      12247999


Q ss_pred             EEeCCHHHHHHHHHHCCCeEeccC---CCceEEEEEcCCCCeEEEEeeC
Q 031406          114 IAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       114 f~v~d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |.|+|+++++++|+++|+++..++   ..++.++|+|||||.|||++..
T Consensus        71 f~V~d~d~~~~~l~~~G~~v~~~p~~~~~G~~~~~~DPdG~~iel~~~~  119 (144)
T 3r6a_A           71 FLVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMTVRHSDGSVIEYVEHS  119 (144)
T ss_dssp             EEESCHHHHHHHHHHTTCEEEEEEEEETTEEEEEEECTTSCEEEEEEEC
T ss_pred             EEeCCHHHHHHHHHHcCCEEecCCccCCCceEEEEECCCCCEEEEEEcC
Confidence            999999999999999999986542   3358899999999999999865

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.85  E-value=2.1e-20  Score=124.70  Aligned_cols=118  Identities=19%  Similarity=0.255  Sum_probs=88.6

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHH---HHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceE
Q 031406           35 YGVVSVHHVGILCENLERSLEFY---QNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRH  111 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy---~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~h  111 (160)
                      +++.++.|+.|.|+|++++++||   +++|||++....+.     ...|+. ++..+.|++...............+..|
T Consensus        16 ~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~-----~~~~~~-g~~~l~l~~~~~~~~~~~~~~~~~g~~h   89 (146)
T 3ct8_A           16 YFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKH-GKTYLVFVQTEDRFQTPTFHRKRTGLNH   89 (146)
T ss_dssp             TTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT-----EEEEEE-TTEEEEEEECCGGGSCSCCCTTSSSCCE
T ss_pred             ccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC-----CceEec-CCeEEEEEEcCCCcccccccccCCCceE
Confidence            34568999999999999999999   99999998765431     124555 7778888876531100000111234689


Q ss_pred             EEEEeC---CHHHHHHHHHHCCCeEecc-C------CCceEEEEEcCCCCeEEEEee
Q 031406          112 TCIAIR---DVSKLKMILDKAGISYTLS-K------SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       112 i~f~v~---d~~~~~~~l~~~G~~~~~~-~------~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      ++|.|+   |+++++++|+++|+++..+ +      .+.+.+||+|||||.|||+++
T Consensus        90 i~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           90 LAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             EEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             EEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            999999   9999999999999998762 2      235789999999999999874

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.84  E-value=7.6e-20  Score=122.09  Aligned_cols=121  Identities=13%  Similarity=0.128  Sum_probs=82.0

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCC---CCCCCCCCCCCCCceEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN---PDPLSGRPEHGGRDRHT  112 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~---~~~~~~~~~~~~~~~hi  112 (160)
                      ...+|.||+|.|+|+++|++||++ ||+........+.   ...+...++..+.+.....   ..........+....|+
T Consensus         6 ~~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (149)
T 4gym_A            6 SQSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTDES---CACMVVSEQAFVMLIDRARFADFTSKPIADATATTEAIV   81 (149)
T ss_dssp             -CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCBTT---EEEEEEETTEEEEEEEHHHHGGGCSSCBCCTTTCBSCEE
T ss_pred             CCccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecCCc---eeEEeecCcceEeeeccccccccccccCCCCCCCCeeEE
Confidence            356789999999999999999988 5665554333222   1233333444555544321   11111111223445799


Q ss_pred             EEEeC---CHHHHHHHHHHCCCeEeccC---CCceEEEEEcCCCCeEEEEeeCC
Q 031406          113 CIAIR---DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVDG  160 (160)
Q Consensus       113 ~f~v~---d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~ie~~~~~~  160 (160)
                      +|.|+   ++++++++++++|+.+..++   ++++.+||+|||||+|||+.++|
T Consensus        82 a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~~~~~~f~DPDGn~iEi~~~~p  135 (149)
T 4gym_A           82 CVSAIDRDDVDRFADTALGAGGTVARDPMDYGFMYGRSFHDLDGHLWEVMWMSA  135 (149)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCEECSCCEECSSEEEEEEECTTCCEEEEEEECT
T ss_pred             EEEeccHHHHHHHHHHHHhcCceeeccccccCCEEEEEEEcCCCCEEEEEEECh
Confidence            99996   67889999999999997654   45789999999999999998764

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.84  E-value=2.1e-20  Score=119.97  Aligned_cols=108  Identities=18%  Similarity=0.216  Sum_probs=81.5

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC---cEEEEEecCCCCCCCCCCCCCCCceE
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA---EMIHLMELPNPDPLSGRPEHGGRDRH  111 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~---~~~~l~~~~~~~~~~~~~~~~~~~~h  111 (160)
                      |.+.++ |+.|.|+|++++++||+++|||++....   .   ...++..++   ..+.+.....  .       .....|
T Consensus         4 m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~---~---~~~~~~~~~~~~~~l~l~~~~~--~-------~~~~~~   67 (119)
T 2pjs_A            4 MAVRRV-VANIATPEPARAQAFYGDILGMPVAMDH---G---WIVTHASPLEAHAQVSFAREGG--S-------GTDVPD   67 (119)
T ss_dssp             -CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEEC---S---SEEEEEEEEEEEEEEEEESSSB--T-------TBCCCS
T ss_pred             cceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEecC---C---EEEEEecCCCCcEEEEEEcCCC--C-------CCceeE
Confidence            557788 9999999999999999999999987641   1   223455542   2444443211  1       122479


Q ss_pred             EEEEeCCHHHHHHHHHHCCCeEecc----CCCceEEEEEcCCCCeEEEEee
Q 031406          112 TCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       112 i~f~v~d~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      ++|.|+|+++++++|+++|+++..+    +.|.+.++++|||||.|||.+.
T Consensus        68 ~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           68 LSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             EEEEECCHHHHHHHHHHCCCccccCCccCCCccEEEEEECCCCCEEEEEec
Confidence            9999999999999999999988543    2456899999999999999985

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.84  E-value=2.8e-20  Score=124.40  Aligned_cols=117  Identities=15%  Similarity=0.124  Sum_probs=84.7

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCC---CCCCCCCCceEEE
Q 031406           37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS---GRPEHGGRDRHTC  113 (160)
Q Consensus        37 ~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~---~~~~~~~~~~hi~  113 (160)
                      ..++.|+.|.|+|++++++||+++|||++... +  .  ....++..++..+.|..........   ..+. ..+ .|++
T Consensus        23 ~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~-~--~--~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~-~~g-~~l~   95 (148)
T 2r6u_A           23 TGRIVHFEIPFDDGDRARAFYRDAFGWAIAEI-P--D--MDYSMVTTGPVGESGMPDEPGYINGGMMQRGE-VTT-PVVT   95 (148)
T ss_dssp             CCCEEEEEEEESSHHHHHHHHHHHHCCEEEEE-T--T--TTEEEEECSCBCTTSSBCSSSCBCEEEEESSS-SCS-CEEE
T ss_pred             CCceEEEEEEeCCHHHHHHHHHHccCcEEEEC-C--C--CCEEEEEeCCcceeecccCCcccccceeecCC-CCe-EEEE
Confidence            36899999999999999999999999998763 2  1  1346677776543333322111000   0000 123 4999


Q ss_pred             EEeCCHHHHHHHHHHCCCeEeccC---C-CceEEEEEcCCCCeEEEEeeCC
Q 031406          114 IAIRDVSKLKMILDKAGISYTLSK---S-GRPAIFTRDPDANALEFTQVDG  160 (160)
Q Consensus       114 f~v~d~~~~~~~l~~~G~~~~~~~---~-g~~~~~~~DPdG~~ie~~~~~~  160 (160)
                      |.|+|+++++++|+++|+++..++   . .++.+||+|||||.|||++..+
T Consensus        96 f~v~dld~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~~  146 (148)
T 2r6u_A           96 VDVESIESALERIESLGGKTVTGRTPVGNMGFAAYFTDSEGNVVGLWETAR  146 (148)
T ss_dssp             EECSCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEECC
T ss_pred             EEcCCHHHHHHHHHHcCCeEecCCeecCCCEEEEEEECCCCCEEEEEecCC
Confidence            999999999999999999986542   2 3589999999999999999753

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.84  E-value=1.8e-19  Score=118.36  Aligned_cols=111  Identities=22%  Similarity=0.289  Sum_probs=83.0

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeCC
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  118 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d  118 (160)
                      .-.+..|.|+|++++++||+++|||++....+      ...++..++..++|.........   +. +....|++|.|+|
T Consensus         7 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~l~~~~~~l~l~~~~~~~~~---~~-~~~~~~l~~~v~d   76 (134)
T 3fcd_A            7 HQITPFLHIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSGCGLRLLEEPARKII---PD-GIARVAICIDVSD   76 (134)
T ss_dssp             CEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETTEEEEEEECCCC-------------EEEEEECSC
T ss_pred             hcceeEEEECCHHHHHHHHHhccCcEEEEeCC------CeEEEEECCEEEEEEeCCCCCcC---CC-CCceEEEEEEeCC
Confidence            45667899999999999999999999887543      24777888888888887643211   11 1223799999999


Q ss_pred             HHHHHHHHHHCCC----eEec----cCCCceEEEEEcCCCCeEEEEeeC
Q 031406          119 VSKLKMILDKAGI----SYTL----SKSGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       119 ~~~~~~~l~~~G~----~~~~----~~~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      +++++++|+++|+    ++..    .+.|.+.++|+|||||.|||.+..
T Consensus        77 v~~~~~~l~~~g~~~g~~i~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  125 (134)
T 3fcd_A           77 IDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFTAPL  125 (134)
T ss_dssp             HHHHHHHHHHHHTTSCGGGEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             HHHHHHHHHhcCCccCCccccCCcccCCCcEEEEEECCCCCEEEEEEcc
Confidence            9999999986654    3322    235668999999999999999865

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.83  E-value=1.1e-19  Score=120.13  Aligned_cols=114  Identities=18%  Similarity=0.149  Sum_probs=84.8

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecC-----CCCCCCCCCCCCCCceEEE
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP-----NPDPLSGRPEHGGRDRHTC  113 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~-----~~~~~~~~~~~~~~~~hi~  113 (160)
                      ++.|+.|.|+|++++++||+++|||++......+    ...++..++..+.+....     .....  ....+.+ .|++
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~----~~~~~~~~~~~l~l~~~~~~~~~~~~~~--~~~~~~~-~~~~   80 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSP----IFRGLDTGKSCIGFNAHEAYELMQLAQF--SETSGIK-FLLN   80 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCBT----TEEEEECSSSEEEEECTHHHHHTTCGGG--CCCBSCC-EEEE
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCCC----ceEEeecCCEEEEEcCcccccccccccc--CCCCCCe-EEEE
Confidence            8999999999999999999999999987543212    125566677777765421     11000  0111233 5999


Q ss_pred             EEeC---CHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEeeC
Q 031406          114 IAIR---DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       114 f~v~---d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |.|+   |+++++++|+++|+++..++    ++.+.+||+|||||.|||.+..
T Consensus        81 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (141)
T 2rbb_A           81 FDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPERNVFRINNVL  133 (141)
T ss_dssp             EECSCHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHHHHcCCeEecCccccCCccEEEEEECCCCCEEEEEEcc
Confidence            9999   59999999999999986542    4678999999999999999864

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.83  E-value=7.4e-19  Score=114.10  Aligned_cols=106  Identities=20%  Similarity=0.271  Sum_probs=83.4

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeCCH
Q 031406           40 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  119 (160)
Q Consensus        40 i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~  119 (160)
                      -.++.|.|+|++++++||++ |||++....  +    ...++..++..++|.......+       ..+..|++|.|+|+
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-LG~~~~~~~--~----~~~~~~~~~~~l~l~~~~~~~~-------~~~~~~~~~~v~dv   69 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-LGFGIVFRD--A----GWMILQRGDLMLEFFAHPGLDP-------LASWFSCCLRLDDL   69 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEEC--S----SEEEEEETTEEEEEEECTTCCG-------GGCCCEEEEEESCH
T ss_pred             cEEEEEEeCCHHHHHHHHHH-CCCEEEecC--C----CEEEEEeCCEEEEEEeCCCCCC-------CCcceEEEEEECCH
Confidence            46899999999999999998 999987641  1    2366777888888876543111       12357999999999


Q ss_pred             HHHHHHHHHCCCeE-------ecc----CCCceEEEEEcCCCCeEEEEeeC
Q 031406          120 SKLKMILDKAGISY-------TLS----KSGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       120 ~~~~~~l~~~G~~~-------~~~----~~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      ++++++|+++|+++       ..+    +.|.+.++++|||||.|||.+..
T Consensus        70 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  120 (126)
T 1ecs_A           70 AEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  120 (126)
T ss_dssp             HHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHHHHCCCccccccCccccCCcccCcccEEEEEECCCCCEEEEecch
Confidence            99999999999983       322    24568999999999999999864

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.82  E-value=1.6e-19  Score=116.69  Aligned_cols=106  Identities=16%  Similarity=0.161  Sum_probs=82.9

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeCC
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  118 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d  118 (160)
                      .-.++.|.|+|++++++||+++|||++....  +    ...++..++..++|.......       . ....|++|.|+|
T Consensus         5 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~--~----~~~~~~~~~~~l~l~~~~~~~-------~-~~~~~~~~~v~d   70 (122)
T 1qto_A            5 LGAVPVLTAVDVPANVSFWVDTLGFEKDFGD--R----DFAGVRRGDIRLHISRTEHQI-------V-ADNTSAWIEVTD   70 (122)
T ss_dssp             CCCCCEEEESSHHHHHHHHHHTTCCEEEEEC--S----SEEEEEETTEEEEEEECSCHH-------H-HTTCEEEEEESC
T ss_pred             cceeEEEEcCCHHHHHHHHHhccCcEEeeCC--C----CEEEEEECCEEEEEEcCCCCC-------C-CCceEEEEEECC
Confidence            4457999999999999999999999987641  1    236677788888887643211       0 113699999999


Q ss_pred             HHHHHHHHHHC------CC--eEeccC---CCceEEEEEcCCCCeEEEEee
Q 031406          119 VSKLKMILDKA------GI--SYTLSK---SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       119 ~~~~~~~l~~~------G~--~~~~~~---~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +++++++|+++      |+  ++..++   ..++.++++|||||.|||.+.
T Consensus        71 vd~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           71 PDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHHHHTTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHhhccccccCccccccCCCcCCCCCcEEEEECCCCCEEEEecC
Confidence            99999999999      99  775432   223889999999999999985

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.82  E-value=2.2e-19  Score=114.17  Aligned_cols=106  Identities=16%  Similarity=0.235  Sum_probs=82.2

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeC-CcEEEEEecCCCCCCCCCCCCCCCceEEEEEe
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  116 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g-~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  116 (160)
                      ++++|+.|.|+|++++++||+++|||++.....  .   ...++..+ +..+.+.+.....        ..+..|++|.|
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~---~~~~~~~~~~~~l~l~~~~~~~--------~~~~~~~~~~v   68 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG--N---AFAVMRDNDGFILTLMKGKEVQ--------YPKTFHVGFPQ   68 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET--T---TEEEEECTTCCEEEEEECSSCC--------CCTTCCEEEEC
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC--C---cEEEEEcCCCcEEEEEeCCCCC--------CCceeEEEEEc
Confidence            378999999999999999999999999876432  1   23666664 4567777653211        12358999999


Q ss_pred             ---CCHHHHHHHHHHCCCeEeccC-CCceEEEEEcCCCCeEEEE
Q 031406          117 ---RDVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFT  156 (160)
Q Consensus       117 ---~d~~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdG~~ie~~  156 (160)
                         +|+++++++|+++|+++..+. .+++.++++|||||.|||+
T Consensus        69 ~~~~d~~~~~~~l~~~G~~~~~p~~~~~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           69 ESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCCCEEC-CEEEEEEETTTEEEEEE
T ss_pred             CCHHHHHHHHHHHHHCCCEEecCcCCCcEEEEEECCCCcEEEEe
Confidence               899999999999999875432 2268899999999999996

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.81  E-value=2.8e-19  Score=117.95  Aligned_cols=117  Identities=12%  Similarity=0.143  Sum_probs=82.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCc--EEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIA  115 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  115 (160)
                      ....||.|.|+|++++++||+++|||++...... ...+..+++..++.  .+++........    ...+.+..|++|.
T Consensus        10 ~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~hi~~~   84 (139)
T 1twu_A           10 AAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHADYHLEFTQYEGGST----APVPHPDSLLVFY   84 (139)
T ss_dssp             CSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSSSEEEEEEEETTCCC----CCCCCTTCEEEEE
T ss_pred             cceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCCceEEEEeecCCCCC----CCCCCCccEEEEE
Confidence            4668899999999999999999999998764321 12234566666543  456655433221    1223446899999


Q ss_pred             eCCH---HHHHHHHHHCCCeEec--cC-CCceEEEEEcCCCCeEEEEeeC
Q 031406          116 IRDV---SKLKMILDKAGISYTL--SK-SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       116 v~d~---~~~~~~l~~~G~~~~~--~~-~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |+|+   ++++++|+++|+++..  .+ .+....||+|||||.|||++..
T Consensus        85 v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           85 VPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             CCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSC
T ss_pred             eCCcchHHHHHHHHHHcCCcCcCCCCcccCCCCeEEECCCCCEEEEEEcC
Confidence            9999   9999999999999873  21 1111137999999999999853

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.81  E-value=1.2e-18  Score=130.86  Aligned_cols=123  Identities=16%  Similarity=0.253  Sum_probs=92.0

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCC-CCcceEEEEeC----CcEEEEEecCCCCCCCCCCCCCCC
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLWVG----AEMIHLMELPNPDPLSGRPEHGGR  108 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~-~~~~~~~~~~g----~~~~~l~~~~~~~~~~~~~~~~~~  108 (160)
                      .+++.+|+||+|.|+|++++++||+++|||++........ .+....++...    +..++++.......  ..+ ..++
T Consensus         3 ~~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~--~~~-~~~~   79 (335)
T 3oaj_A            3 AKKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQ--GVI-GDGQ   79 (335)
T ss_dssp             CCCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCB--CBC-CBSE
T ss_pred             cccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCC--CCC-CCCc
Confidence            3568899999999999999999999999999887543221 11112333332    46788887654321  111 1245


Q ss_pred             ceEEEEEeC--CHHHHHHHHHHCCCeEec-cCCCceEEEEEcCCCCeEEEEeeC
Q 031406          109 DRHTCIAIR--DVSKLKMILDKAGISYTL-SKSGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       109 ~~hi~f~v~--d~~~~~~~l~~~G~~~~~-~~~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      +.|+||.|+  |+++++++|+++|+++.. ...+.+.+||+|||||.|||++..
T Consensus        80 ~~hiaf~V~~~dl~~~~~rL~~~Gv~~~~~~~~g~~~~~f~DPdGn~iEl~~~~  133 (335)
T 3oaj_A           80 VGVTSYVVPKGAMAFWEKRLEKFNVPYTKIERFGEQYVEFDDPHGLHLEIVERE  133 (335)
T ss_dssp             EEEEEEEECTTCHHHHHHHHHHTTCCCEEEEETTEEEEEEECTTSCEEEEEECS
T ss_pred             eEEEEEEecHHHHHHHHHHHHhCcceeeeeccCCcEEEEEECCCCCEEEEEEeC
Confidence            689999999  999999999999998865 335678999999999999999864

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.80  E-value=1.1e-18  Score=115.89  Aligned_cols=114  Identities=18%  Similarity=0.240  Sum_probs=82.1

Q ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCC-C---CCCCCCCCCceEEEEEe
Q 031406           41 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP-L---SGRPEHGGRDRHTCIAI  116 (160)
Q Consensus        41 ~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~-~---~~~~~~~~~~~hi~f~v  116 (160)
                      ..+.|.|+|++++++||+++|||++......+    ...++..++..+.|........ .   ......+.+ .+++|.|
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~----~~~~l~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~g-~~~~~~v   81 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERPDE----EFVYLTLDGVDVMLEGIAGKSRKWLSGDLEFPLGSG-VNFQWDV   81 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEGGG----TEEEEEETTEEEEEEEC-----------CCSSTTTT-EEEEEEC
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecCCC----CEEEEEcCCeEEEEEeccCCCcccccCccccCCCCc-eEEEEEE
Confidence            45889999999999999999999987532211    2366777888888877632111 0   001112233 3599999


Q ss_pred             CCHHHHHHHHHH-CCCeEeccC-----------CCceEEEEEcCCCCeEEEEeeC
Q 031406          117 RDVSKLKMILDK-AGISYTLSK-----------SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       117 ~d~~~~~~~l~~-~G~~~~~~~-----------~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      +|+++++++|++ +|+++..++           .+.+.++|+|||||.|||++..
T Consensus        82 ~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~  136 (145)
T 2rk9_A           82 IDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDI  136 (145)
T ss_dssp             SCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC-
T ss_pred             CCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcC
Confidence            999999999999 999885432           3458899999999999999864

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.79  E-value=3.8e-18  Score=123.44  Aligned_cols=108  Identities=19%  Similarity=0.243  Sum_probs=87.2

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  115 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  115 (160)
                      .+.+|+||+|.|+|++++++||+++|||++.....      ..+++..++..+.|......         +.+..|++|.
T Consensus        23 ~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~------~~~~L~~g~~~l~l~~~~~~---------~~~~~hiaf~   87 (252)
T 3pkv_A           23 HMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGVSQIQFRAAADG---------TKPFYHIAIN   87 (252)
T ss_dssp             --CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS------SEEEEEETTEEEEEEECCTT---------CCCCCEEEEE
T ss_pred             cCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC------CEEEEEeCCEEEEEEECCCC---------CCCeeEEEEE
Confidence            45689999999999999999999999999877543      23778888888888775422         1236899999


Q ss_pred             eC--CHHHHHHHHHHCCCeEec---------cCCCceEEEEEcCCCCeEEEEeeC
Q 031406          116 IR--DVSKLKMILDKAGISYTL---------SKSGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       116 v~--d~~~~~~~l~~~G~~~~~---------~~~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |+  ++++++++|+++ +++..         ..++.+.+||+|||||.|||++.+
T Consensus        88 V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~  141 (252)
T 3pkv_A           88 IAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQ  141 (252)
T ss_dssp             ECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEES
T ss_pred             ecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeC
Confidence            86  799999999999 98854         134678999999999999999864

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.77  E-value=9.6e-19  Score=115.39  Aligned_cols=114  Identities=18%  Similarity=0.156  Sum_probs=78.9

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEE-----Eec-CCCCCCCCCCCCCCCc
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHL-----MEL-PNPDPLSGRPEHGGRD  109 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l-----~~~-~~~~~~~~~~~~~~~~  109 (160)
                      .++++.|+.|.|+|++++++||+++|||++....+  .    ..++. ++..+..     ... .....  .....+.+.
T Consensus         5 ~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~--~----~~~~~-~g~~l~~~~~~~~~~~~~~~~--~~~~~~~~~   75 (141)
T 2qnt_A            5 QGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG--S----FVLFE-TGFAIHEGRSLEETIWRTSSD--AQEAYGRRN   75 (141)
T ss_dssp             CSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS--S----EEEET-TSCEEEEHHHHHHHHHSCCC----CCCSCCSS
T ss_pred             cccccceEEEEECCHHHHHHHHHHhcCCEEEEEcC--C----cEEEe-ccceeccCchhhhhccccCCc--cccccCCCc
Confidence            34688999999999999999999999999876432  1    12222 3333321     010 00000  011123446


Q ss_pred             eEEEEEeCCHHHHHHHHHHCCCeEecc----CCCceEEEEEcCCCCeEEEEeeC
Q 031406          110 RHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       110 ~hi~f~v~d~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      .|++|.|+|+++++++|++ |+++..+    +.|.+.++++|||||.|||.+..
T Consensus        76 ~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  128 (141)
T 2qnt_A           76 MLLYFEHADVDAAFQDIAP-HVELIHPLERQAWGQRVFRFYDPDGHAIEVGESL  128 (141)
T ss_dssp             CEEEEEESCHHHHHC-CGG-GSCEEEEEEECTTSCEEEEEECTTCCEEEEEECC
T ss_pred             eEEEEEeCcHHHHHHHHHc-CCccccCCccCCCCCEEEEEECCCCCEEEEEecc
Confidence            8999999999999999999 9997543    24568999999999999999863

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.77  E-value=4.3e-18  Score=127.99  Aligned_cols=116  Identities=14%  Similarity=0.183  Sum_probs=88.2

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCc--EEEEEecCCCCCCCCCCCCCCCceE
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH  111 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~h  111 (160)
                      .+.+.+|+|+.|.|+|++++++||+++|||++..... +.......|+..++.  .+.+......        ..+++.|
T Consensus       148 g~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~~~~l~~~~~~~~--------~~~~~~H  218 (339)
T 3lm4_A          148 GIPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLLGHEVACMRDMTG--------GHGKLHH  218 (339)
T ss_dssp             SSCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSSSCSEEEEECTTS--------CCSEEEE
T ss_pred             CCCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCCceEEEEeccCCC--------CCCceeE
Confidence            3467899999999999999999999999999886543 222234577777643  4555552111        1244799


Q ss_pred             EEEEeCC---HHHHHHHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEee
Q 031406          112 TCIAIRD---VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       112 i~f~v~d---~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      ++|.|+|   +++++++|+++|+++...+     ...+++||+||+||.||+++.
T Consensus       219 iaf~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  273 (339)
T 3lm4_A          219 LAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGE  273 (339)
T ss_dssp             EEEECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECC
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEc
Confidence            9999999   8888999999999987433     235779999999999999853

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.76  E-value=1.4e-17  Score=110.99  Aligned_cols=114  Identities=13%  Similarity=0.126  Sum_probs=76.3

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEee-ecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEE--
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINE-ARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT--  112 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~-~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi--  112 (160)
                      ++.++.|+.|.|+|++++++||+++|||++.. ....+..    .++   +..++|. ........  ........++  
T Consensus        18 ~~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~----~~~---g~~l~l~-~~~~~~~~--~~~~~~~~~~g~   87 (148)
T 3bt3_A           18 YVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEGF----GDY---GCVFDYP-SEVAVAHL--TPFRGFHLFKGE   87 (148)
T ss_dssp             CEEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTTSC----EEE---EEEESSC-TTTTSCC----CCCSEEEEESC
T ss_pred             ceEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCCCc----cEE---ccEEEEe-ccCCCccc--ccccccceeecc
Confidence            35689999999999999999999999999853 1221221    233   2233330 11111110  0000111122  


Q ss_pred             ------EE-EeCCHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEeeC
Q 031406          113 ------CI-AIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       113 ------~f-~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                            +| .|+|+++++++|+++|+++..++    .|.+.++|+|||||.|||.++.
T Consensus        88 ~~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           88 PIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             CCSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             CCCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCCccEEEEEECCCCCEEEEeeec
Confidence                  55 99999999999999999876543    4568899999999999999863

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.76  E-value=1.7e-17  Score=122.95  Aligned_cols=109  Identities=19%  Similarity=0.220  Sum_probs=84.5

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CC---cEEEEEecCCCCCCCCCCCCCCCce
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGRDR  110 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~---~~~~l~~~~~~~~~~~~~~~~~~~~  110 (160)
                      +.+.+|+||.|.|+|++++++||+++|||++......     ...++.. ++   ..+.+....           ..+..
T Consensus         4 ~~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~l~~~~~~~~~~l~l~~~~-----------~~~~~   67 (309)
T 3hpy_A            4 TGVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQ-----GRVYFKCWDERDHSCYIIREAD-----------TAGID   67 (309)
T ss_dssp             CSEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECTT-----SCEEEECTTCCBSCSEEEEECS-----------SCEEE
T ss_pred             cccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcCC-----CeEEEEeccCCCceEEEEEeCC-----------CCcee
Confidence            4578999999999999999999999999998875321     1256665 43   234444321           12468


Q ss_pred             EEEEEeCC---HHHHHHHHHHCCCeEecc-----CCCceEEEEEcCCCCeEEEEeeC
Q 031406          111 HTCIAIRD---VSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       111 hi~f~v~d---~~~~~~~l~~~G~~~~~~-----~~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |++|.|++   +++++++|+++|+++...     +.+++.+||+|||||.|||++..
T Consensus        68 h~a~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~  124 (309)
T 3hpy_A           68 FFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEK  124 (309)
T ss_dssp             EEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCB
T ss_pred             EEEEEECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEcc
Confidence            99999986   899999999999998654     24568999999999999998753

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.76  E-value=1.1e-17  Score=125.68  Aligned_cols=116  Identities=16%  Similarity=0.175  Sum_probs=87.7

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC--cEEEEEecCCCCCCCCCCCCCCCceE
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRH  111 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~--~~~~l~~~~~~~~~~~~~~~~~~~~h  111 (160)
                      ...+.+|+||+|.|+|++++.+||+++|||+......      ....+..|+  ..+++........  ..+. .++++|
T Consensus       148 ~~~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~------~~~~~~~g~~~~~l~l~~~~~~~~--~~~g-~g~~~H  218 (335)
T 3oaj_A          148 DVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG------DFVRYRSAGDIGNVIDLKLTPIGR--GQMG-AGTVHH  218 (335)
T ss_dssp             TTSCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET------TEEEEECSSSSSCEEEEESSCCCB--CBCS-BTEEEE
T ss_pred             hhhhccccceEEEECCHHHHHHHHHHHhCCEEeeccC------CEEEEEeCCCCcEEEEEeCCCCCc--CCCC-CcceEE
Confidence            4568899999999999999999999999999987532      124455543  4677776533211  1111 245789


Q ss_pred             EEEEeCC---HHHHHHHHHHCCCeEecc--CCCceEEEEEcCCCCeEEEEee
Q 031406          112 TCIAIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       112 i~f~v~d---~~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +||.|+|   ++++.++|+++|+.+...  ....+++||+||+||.||+...
T Consensus       219 iAf~v~d~~~l~~~~~~L~~~G~~~~~~~~r~~~~siYfrDP~G~~iEl~td  270 (335)
T 3oaj_A          219 IAWRANDDEDQLDWQRYIASHGYGVTPVRDRNYFNAIYFREHGEILFEIATD  270 (335)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCCCCCEECSSSEEEEEECTTSCEEEEEES
T ss_pred             EEEEcCCHHHHHHHHHHHHHCCCCccccccCCcEEEEEEECCCCcEEEEEeC
Confidence            9999998   666899999999987543  3456889999999999999986

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.76  E-value=2.7e-17  Score=123.42  Aligned_cols=123  Identities=15%  Similarity=0.214  Sum_probs=87.4

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCC-CCcceEEEEeC----CcEEEEEecCCCCCCCCCCCCCCC
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLWVG----AEMIHLMELPNPDPLSGRPEHGGR  108 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~-~~~~~~~~~~g----~~~~~l~~~~~~~~~~~~~~~~~~  108 (160)
                      ++++.+|+||.|.|+|++++++||+++|||++........ ......++..+    +..+.+.........   .....+
T Consensus        25 m~~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~~---~~~~~~  101 (338)
T 1zsw_A           25 MYEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRT---YRGTNA  101 (338)
T ss_dssp             SSCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBC---BCCBSE
T ss_pred             cCcCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCccC---cCCCCC
Confidence            3357899999999999999999999999999876431111 01111223332    346676665432111   111234


Q ss_pred             ceEEEEEeC---CHHHHHHHHHHCCCeEeccC--CCceEEEEEcCCCCeEEEEeeC
Q 031406          109 DRHTCIAIR---DVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       109 ~~hi~f~v~---d~~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      ..|++|.|+   |+++++++|+++|+++...+  .|.+.+||+|||||.|||++..
T Consensus       102 ~~hiaf~v~~~~dld~~~~~l~~~G~~~~~~~~~~G~~~~~f~DPdG~~iel~~~~  157 (338)
T 1zsw_A          102 ITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSN  157 (338)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECT
T ss_pred             eeeEEEEcCCHHHHHHHHHHHHHCCCccccccccCCcEEEEEECCCCCEEEEEEcC
Confidence            689999998   78999999999999987542  4568999999999999999864

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.75  E-value=1.6e-17  Score=123.19  Aligned_cols=114  Identities=17%  Similarity=0.280  Sum_probs=84.8

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCC-CCcceEEEEeCCc--EEEEEecCCCCCCCCCCCCCCCceE
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH  111 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~-~~~~~~~~~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~h  111 (160)
                      +.+.+|+||.|.|+|++++++||+++|||+.......+. ......|+..++.  .+.+....          ..++..|
T Consensus       147 ~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~H  216 (309)
T 3hpy_A          147 IAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFVEYP----------EKGKLHH  216 (309)
T ss_dssp             SCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSSSCSEEEEECS----------STTEEEE
T ss_pred             cccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCCceeEEEecCC----------CCCceeE
Confidence            467899999999999999999999999999876543222 2234567777543  23333321          1234799


Q ss_pred             EEEEeCCHHH---HHHHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEee
Q 031406          112 TCIAIRDVSK---LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       112 i~f~v~d~~~---~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +||.|+|+++   ++++|+++|+++...+     .+.+.+|++|||||.||++..
T Consensus       217 iaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (309)
T 3hpy_A          217 CSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMG  271 (309)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEE
T ss_pred             EEEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeC
Confidence            9999997665   6789999999986432     346789999999999999864

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.75  E-value=2.3e-17  Score=121.49  Aligned_cols=108  Identities=16%  Similarity=0.139  Sum_probs=83.9

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEe
Q 031406           37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  116 (160)
Q Consensus        37 ~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  116 (160)
                      +.+|+||.|.|+|++++++||+++|||++....+      ...++..++..+.+......         ..+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~---------~~~~~~~~f~v   66 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRIAVQQGE---------VDDLAFAGYEV   66 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT---------TCEEEEEEEEE
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC------CeEEEEeCCCcEEEEEecCC---------CCCccEEEEEe
Confidence            5689999999999999999999999999886532      13566666543322222111         12368999999


Q ss_pred             C---CHHHHHHHHHHCCCeEeccC-------CCceEEEEEcCCCCeEEEEeeC
Q 031406          117 R---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       117 ~---d~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      +   |+++++++|+++|+++...+       .+.+.+||+|||||.|||++.+
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  119 (297)
T 1lgt_A           67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (297)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECc
Confidence            8   99999999999999986532       4678999999999999999864

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.75  E-value=2e-17  Score=123.94  Aligned_cols=116  Identities=12%  Similarity=0.065  Sum_probs=85.7

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCC-----------CCCcceEEEEeC----CcEEEEEecCCCCCC
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-----------KLPYRGAWLWVG----AEMIHLMELPNPDPL   99 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~-----------~~~~~~~~~~~g----~~~~~l~~~~~~~~~   99 (160)
                      |+++++.|++|.|+|++++++||+++|||++.......           ...+..+++..+    ...++|.......  
T Consensus        23 M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~--  100 (330)
T 3zi1_A           23 MAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVG--  100 (330)
T ss_dssp             CSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCC--
T ss_pred             cccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCC--
Confidence            44569999999999999999999999999987654322           233445666664    2356666543221  


Q ss_pred             CCCCCCCCCceEEEEEeCCHHHHHHHHHHCCCeEeccCCCceEEEEEcCCCCeEEEEeeC
Q 031406          100 SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       100 ~~~~~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                        ....+.++.|++|.|+|+   +++++++|+++...+.  ..+|++|||||.|||++..
T Consensus       101 --~~~~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~~--~~~~~~DPdG~~iel~~~~  153 (330)
T 3zi1_A          101 --DYKLGNDFMGITLASSQA---VSNARKLEWPLTEVAE--GVFETEAPGGYKFYLQNRS  153 (330)
T ss_dssp             --CCCBCSSEEEEEEECHHH---HHHHHHHTCCCEEEET--TEEEEECTTSCEEEEESSC
T ss_pred             --ccccCCCeeEEEEECchH---HHHHHHcCCceeccCC--ceEEEECCCCCEEEEEecC
Confidence              112345679999999988   6677889999876553  4799999999999999864

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.74  E-value=2.2e-17  Score=121.33  Aligned_cols=108  Identities=13%  Similarity=0.135  Sum_probs=83.0

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEe
Q 031406           37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  116 (160)
Q Consensus        37 ~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  116 (160)
                      +.+|+||.|.|+|++++++||+++|||++.....      ...++..++..+.+......         ..+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~l~~~~~~---------~~~~~~~~f~v   66 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWRIAVQPGE---------LDDLAYAGLEV   66 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT---------TCEEEEEEEEC
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC------CeEEEEcCCceEEEEEccCC---------CCCccEEEEEE
Confidence            5689999999999999999999999999876532      12566666543222222111         12368999999


Q ss_pred             C---CHHHHHHHHHHCCCeEeccC-------CCceEEEEEcCCCCeEEEEeeC
Q 031406          117 R---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       117 ~---d~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      +   |+++++++|+++|+++...+       .+.+.++|+|||||.|||++..
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  119 (292)
T 1kw3_B           67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGP  119 (292)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECc
Confidence            8   99999999999999986543       4578899999999999999853

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.74  E-value=1.3e-16  Score=117.08  Aligned_cols=114  Identities=15%  Similarity=0.124  Sum_probs=82.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeC
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  117 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~  117 (160)
                      ..+.|+.|.|+|++++++||+++|||++......+..  ....+..++..+..+ .... .     .......|++|.|+
T Consensus       163 ~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~-~-----~~~~~~~~~~~~v~  233 (282)
T 3oxh_A          163 GTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQ--NYRVLKAGDAEVGGC-MEPP-M-----PGVPNHWHVYFAVD  233 (282)
T ss_dssp             TSEEEEEEECSCHHHHHHHHHHHHCCEEEEC---------CEEEEETTEEEEEE-ECCS-S-----TTCCSEEEEEEECS
T ss_pred             CccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCCc--ceEEEEcCCccEeee-cCCC-C-----CCCCCeEEEEEEeC
Confidence            4689999999999999999999999998764311111  224555665443322 2211 1     11123478999999


Q ss_pred             CHHHHHHHHHHCCCeEecc----CCCceEEEEEcCCCCeEEEEeeCC
Q 031406          118 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  160 (160)
Q Consensus       118 d~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~ie~~~~~~  160 (160)
                      |+++++++++++|+++..+    +.+++.++++|||||.|+|++.++
T Consensus       234 dvd~~~~~~~~~G~~~~~~p~~~~~~~~~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          234 DADATAAKAAAAGGQVIAEPADIPSVGRFAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEEC-
T ss_pred             CHHHHHHHHHHcCCEEecCCeEcCCCeEEEEEECCCCCEEEEEecCC
Confidence            9999999999999998654    245889999999999999999764

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.74  E-value=9.5e-17  Score=119.81  Aligned_cols=111  Identities=17%  Similarity=0.220  Sum_probs=84.3

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC--cEEEEEecCCCCCCCCCCCCCCCceEE
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHT  112 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~--~~~~l~~~~~~~~~~~~~~~~~~~~hi  112 (160)
                      +.+.+|+|+.|.|+|++++++|| ++|||++......+.......|+..++  ..+.+....           +.+++|+
T Consensus       148 ~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~~~~~~~~~~~-----------~~~~~Hi  215 (323)
T 1f1u_A          148 GELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN-----------GPRMHHV  215 (323)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESS-----------BSEEEEE
T ss_pred             CCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCCcccEEEeCCC-----------CCCceEE
Confidence            56789999999999999999999 999999876543222223456666643  234444221           1247899


Q ss_pred             EEEeCCHHH---HHHHHHHCCC--eEecc-----CCCceEEEEEcCCCCeEEEEe
Q 031406          113 CIAIRDVSK---LKMILDKAGI--SYTLS-----KSGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       113 ~f~v~d~~~---~~~~l~~~G~--~~~~~-----~~g~~~~~~~DPdG~~ie~~~  157 (160)
                      +|.|+|+++   ++++|+++|+  ++...     .++.+.+|++||+||.||++.
T Consensus       216 af~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~  270 (323)
T 1f1u_A          216 AFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYT  270 (323)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEE
T ss_pred             EEECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEe
Confidence            999999998   9999999999  88642     234678999999999999986

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.74  E-value=5.3e-17  Score=120.10  Aligned_cols=114  Identities=17%  Similarity=0.283  Sum_probs=82.6

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC--cEEEEEecCCCCCCCCCCCCCCCceEE
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHT  112 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~--~~~~l~~~~~~~~~~~~~~~~~~~~hi  112 (160)
                      +++.+++|+.|.|+|++++++||+++|||++..............|+..++  ..+.+....         . .+...|+
T Consensus       146 ~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---------~-~g~~~hi  215 (307)
T 1mpy_A          146 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHP---------E-KGRLHHV  215 (307)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEECS---------S-SSEEEEE
T ss_pred             CCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCCceeEEEecCC---------C-CCcceEE
Confidence            467899999999999999999999999999876432111111224555542  244444321         0 1236899


Q ss_pred             EEEeC---CHHHHHHHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEee
Q 031406          113 CIAIR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       113 ~f~v~---d~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +|.|+   |+++++++|+++|+++...+     ..++.+||+|||||.|||++.
T Consensus       216 ~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  269 (307)
T 1mpy_A          216 SFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCG  269 (307)
T ss_dssp             EEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEec
Confidence            99999   56677899999999985432     236789999999999999985

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.73  E-value=4.5e-17  Score=120.47  Aligned_cols=108  Identities=18%  Similarity=0.227  Sum_probs=84.9

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC--cEEEEEecCCCCCCCCCCCCCCCceEE
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHT  112 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~--~~~~l~~~~~~~~~~~~~~~~~~~~hi  112 (160)
                      |.+.+++||.|.|+|++++++||+++|||++..... +    ...++..++  ..+.+....           ..+..|+
T Consensus         2 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~-~----~~~~~~~~~~~~~l~l~~~~-----------~~~~~~~   65 (305)
T 2wl9_A            2 AKVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGE-D----DRIYLRMDRWHHRIVLHADG-----------SDDLAYI   65 (305)
T ss_dssp             CCCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCSC-T----TEEEEECSSBSCSEEEECSS-----------CCEEEEE
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHhccCCEEeeccC-C----CeEEEEeCCCeEEEEEEECC-----------CCCeEEE
Confidence            457899999999999999999999999999876211 1    235677765  456665322           1336899


Q ss_pred             EEEeC---CHHHHHHHHHHCCCeEeccC-------CCceEEEEEcCCCCeEEEEee
Q 031406          113 CIAIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       113 ~f~v~---d~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +|.|+   |+++++++|+++|+++...+       .+.+.++|+|||||.|||++.
T Consensus        66 ~f~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           66 GWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEE
T ss_pred             EEEECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEEC
Confidence            99997   69999999999999986532       346889999999999999876

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.73  E-value=8.7e-17  Score=120.68  Aligned_cols=116  Identities=14%  Similarity=0.206  Sum_probs=84.4

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe--CCc--EEEEEecCCCCCCCCCCCCCCCc
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV--GAE--MIHLMELPNPDPLSGRPEHGGRD  109 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~--g~~--~~~l~~~~~~~~~~~~~~~~~~~  109 (160)
                      .+++.++.|+.|.|+|++++++||+++|||++.....  .    ..++..  ++.  .+..+......   ..+. .++.
T Consensus       175 ~~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~----~~~~~~~~~g~~~~~~~~~~~~~~---~~~~-~~~~  244 (338)
T 1zsw_A          175 KHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND--Q----EAIFQSIKGEAFGEIVVKYLDGPT---EKPG-RGSI  244 (338)
T ss_dssp             GGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS--S----EEEEESSTTCSTTCEEEEECCSSB---CBCC-BTCE
T ss_pred             cccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC--C----eEEEEecCCCCceEEEEeccCCCC---CCCC-CCce
Confidence            4567899999999999999999999999999876543  1    244555  232  33333321110   1111 1346


Q ss_pred             eEEEEEeC---CHHHHHHHHHHCCCeEecc--CCCceEEEEEcCCCCeEEEEeeC
Q 031406          110 RHTCIAIR---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       110 ~hi~f~v~---d~~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      .|++|.|+   |+++++++|+++|+++..+  ..+.+.+||+|||||.|||++..
T Consensus       245 ~hiaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          245 HHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEEE
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHCCCceeeeeecCceEEEEEECCCCCEEEEEEcC
Confidence            89999999   7999999999999998532  24568899999999999999853

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.73  E-value=3.4e-17  Score=121.02  Aligned_cols=109  Identities=17%  Similarity=0.156  Sum_probs=83.5

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC--cEEEEEecCCCCCCCCCCCCCCCceE
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRH  111 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~--~~~~l~~~~~~~~~~~~~~~~~~~~h  111 (160)
                      .|++.+++|+.|.|+|++++++||+++|||++.....  .   ...|+..++  ..+.+....           ..+..|
T Consensus         4 ~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~~~~l~l~~~~-----------~~~~~~   67 (302)
T 2ehz_A            4 QAAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--K---DRFYLRMDYWHHRIVVHHNG-----------QDDLEY   67 (302)
T ss_dssp             CCCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--S---SEEEEESSSBSCSEEEESSC-----------CSEEEE
T ss_pred             cccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--C---cceEEEeCCCceEEEEecCC-----------CCCeeE
Confidence            3567899999999999999999999999999876421  1   235666643  234443221           123689


Q ss_pred             EEEEeC---CHHHHHHHHHHCCCeEeccC-------CCceEEEEEcCCCCeEEEEee
Q 031406          112 TCIAIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       112 i~f~v~---d~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      ++|.|+   |+++++++|+++|+++...+       .+++.+||+|||||.|||++.
T Consensus        68 ~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  124 (302)
T 2ehz_A           68 LGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWG  124 (302)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEE
T ss_pred             EEEEECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEEC
Confidence            999995   78999999999999986543       346889999999999999975

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.73  E-value=3.6e-17  Score=120.64  Aligned_cols=107  Identities=17%  Similarity=0.167  Sum_probs=82.4

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEee-ecCCCCCCcceEEEEeCCc--EEEEEecCCCCCCCCCCCCCCCceE
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINE-ARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH  111 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~-~~~~~~~~~~~~~~~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~h  111 (160)
                      |++.+|+|+.|.|+|++++++||+++|||++.. ..+      ...++..++.  .+.+....           ..+..|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~------~~~~~~~~~~~~~l~l~~~~-----------~~~~~~   63 (300)
T 2zyq_A            1 MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPE------GALYLRMDDFPARLVVVPGE-----------HDRLLE   63 (300)
T ss_dssp             -CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCCS------SCEEEESSSSSCSEEEEECS-----------SCEEEE
T ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCCC------CeEEEEeCCCcEEEEEecCC-----------CCCcce
Confidence            356799999999999999999999999999875 321      1256666543  34443311           133689


Q ss_pred             EEEEeCC---HHHHHHHHHHCCCeEeccC-------CCceEEEEEcCCCCeEEEEee
Q 031406          112 TCIAIRD---VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       112 i~f~v~d---~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      ++|.|++   +++++++|+++|+++...+       .+.+.+||+|||||.|||++.
T Consensus        64 ~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           64 AGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEEC
T ss_pred             EEEEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEc
Confidence            9999974   8889999999999986432       457899999999999999986

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.73  E-value=3.5e-17  Score=121.06  Aligned_cols=109  Identities=17%  Similarity=0.170  Sum_probs=83.6

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC--cEEEEEecCCCCCCCCCCCCCCCceEEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTC  113 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~--~~~~l~~~~~~~~~~~~~~~~~~~~hi~  113 (160)
                      ++.+++||.|.|+|++++++||+++|||++......     ...++..++  ..+.+......         ..+..|++
T Consensus         4 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-----~~~~l~~~~~~~~~~l~~~~~~---------~~~~~~~~   69 (307)
T 1mpy_A            4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ-----GRVYLKAWTEVDKFSLVLREAD---------EPGMDFMG   69 (307)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT-----SCEEEECTTCCBSCSEEEEECS---------SCEEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecCC-----CcEEEEecCCCCceEEEEccCC---------CCCcceEE
Confidence            467999999999999999999999999998865331     125666643  23333332211         12368999


Q ss_pred             EEe---CCHHHHHHHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEee
Q 031406          114 IAI---RDVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       114 f~v---~d~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      |.|   +|+++++++|+++|+++...+     .+++.++|+|||||.|||++.
T Consensus        70 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  122 (307)
T 1mpy_A           70 FKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYAD  122 (307)
T ss_dssp             EEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESC
T ss_pred             EEeCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEc
Confidence            999   799999999999999886543     346899999999999999984

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.72  E-value=1.9e-16  Score=116.24  Aligned_cols=115  Identities=17%  Similarity=0.193  Sum_probs=82.6

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEE-EEEecCCCCCCCCCCCCCCCceEEEEEeC
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMI-HLMELPNPDPLSGRPEHGGRDRHTCIAIR  117 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~-~l~~~~~~~~~~~~~~~~~~~~hi~f~v~  117 (160)
                      .+.|+.|.|+|++++++||+++|||++......... ....++..++... .+.......     +.......+++|.|+
T Consensus        32 ~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~-~~~~~~~~~g~~~~~l~~~~~~~-----~~~~~~~~~~~~~v~  105 (282)
T 3oxh_A           32 TPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGG-GVYSMATLNGEAVAAIAPMPPGA-----PEGMPPIWNTYIAVD  105 (282)
T ss_dssp             SEEEEEEEESCHHHHHHHHHHHHCCEEEEEC------CCEEEEEETTEEEEEEEECCSCC--------CCCEEEEEEECS
T ss_pred             CcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCc-cCEEEEEeCCeeeEeeccCCCCC-----CCCCCCcEEEEEEeC
Confidence            699999999999999999999999998764331110 0124455555433 344433221     111223468999999


Q ss_pred             CHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEeeC
Q 031406          118 DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       118 d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |+++++++++++|+++..++    ..++.++|+||+||.|+|++..
T Consensus       106 d~d~~~~~l~~~G~~~~~~p~~~~~~g~~~~~~DP~G~~i~l~~~~  151 (282)
T 3oxh_A          106 DVDAVVDKVVPGGGQVMMPAFDIGDAGRMSFITDPTGAAVGLWQAN  151 (282)
T ss_dssp             CHHHHHTTTTTTTCEEEEEEEEETTTEEEEEEECTTCCEEEEEEES
T ss_pred             CHHHHHHHHHHCCCEEEECCEecCCCeEEEEEECCCCCEEEEEEcc
Confidence            99999999999999986542    3568999999999999999864

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.72  E-value=2.2e-16  Score=118.28  Aligned_cols=111  Identities=18%  Similarity=0.302  Sum_probs=84.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCc--EEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIA  115 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  115 (160)
                      ..+.|+.|.|+|++++++||+++|||++........    ..|+..++.  .+.+.......      ..+.+..|++|.
T Consensus       158 ~~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~~----~~~l~~g~~~~~l~l~~~~~~~------~~~~~~~hiaf~  227 (330)
T 3zi1_A          158 DPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEKQ----RALLGYADNQCKLELQGVKGGV------DHAAAFGRIAFS  227 (330)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTTT----EEEEESSTTSCEEEEEECSSCC------CCBTTCCEEEEE
T ss_pred             CceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCCc----EEEEEeCCceEEEEECCCCCCC------CCCCCCceEEEE
Confidence            457899999999999999999999999987654321    467777654  44444332111      112345799999


Q ss_pred             eC--CHHHHHHHHHHCCCeEecc--------CCCceEEEEEcCCCCeEEEEee
Q 031406          116 IR--DVSKLKMILDKAGISYTLS--------KSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       116 v~--d~~~~~~~l~~~G~~~~~~--------~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      |+  |+++++++|+++|+++..+        ..+.+.+||+|||||.|||++.
T Consensus       228 v~~~dld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~  280 (330)
T 3zi1_A          228 CPQKELPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGD  280 (330)
T ss_dssp             ECGGGHHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEH
T ss_pred             EEcccHHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEe
Confidence            95  8999999999999997543        2356899999999999999984

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.72  E-value=9.2e-17  Score=118.44  Aligned_cols=113  Identities=12%  Similarity=0.222  Sum_probs=82.6

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCC---------CCCcceEEEEeCC--cEEEEEecCCCCCCCCCCC
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD---------KLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPE  104 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~---------~~~~~~~~~~~g~--~~~~l~~~~~~~~~~~~~~  104 (160)
                      .+.+++|+.|.|+|++++++||+++|||++......+         .......|+..++  ..+.+....         .
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~  209 (300)
T 2zyq_A          139 GEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPMP---------T  209 (300)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSCSEEEESSC---------C
T ss_pred             CCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCCccEEEEecCC---------C
Confidence            4568999999999999999999999999986432111         1012346666653  245554321         1


Q ss_pred             CCCCceEEEEEeCCHHH---HHHHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEee
Q 031406          105 HGGRDRHTCIAIRDVSK---LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       105 ~~~~~~hi~f~v~d~~~---~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                       ..+..|++|.|+|+++   ++++|+++|+++...+     .+.+.+||+|||||.|||++.
T Consensus       210 -~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~  270 (300)
T 2zyq_A          210 -SSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCE  270 (300)
T ss_dssp             -SSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEEC
T ss_pred             -CCCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeC
Confidence             1346899999998665   5999999999987532     236789999999999999873

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.71  E-value=1.1e-16  Score=118.92  Aligned_cols=107  Identities=16%  Similarity=0.224  Sum_probs=83.6

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCc--EEEEEecCCCCCCCCCCCCCCCceEE
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHT  112 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~hi  112 (160)
                      .++.+|+|+.|.|+|++++++||+++|||++.....     ....|+..++.  .+.+....            .+..|+
T Consensus       137 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-----~~~~fl~~~~~~~~l~l~~~~------------~g~~hi  199 (310)
T 3b59_A          137 GVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG-----DFMCFLRCNSAHHRIAILPGP------------PCLNHV  199 (310)
T ss_dssp             CCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEET-----TTEEEEESSSBSCSEEEEESS------------SEEEEE
T ss_pred             CcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeC-----CeEEEEecCCCcceEEEECCC------------CceEEE
Confidence            467899999999999999999999999999876432     13467777543  34444321            236899


Q ss_pred             EEEeCCHHHH---HHHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEee
Q 031406          113 CIAIRDVSKL---KMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       113 ~f~v~d~~~~---~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +|.|+|++++   +++|+++|+++...+     +..+++|++|||||.||+.+.
T Consensus       200 ~f~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  253 (310)
T 3b59_A          200 AYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSE  253 (310)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeC
Confidence            9999998776   999999999886532     345789999999999999873

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.70  E-value=2.8e-16  Score=116.70  Aligned_cols=108  Identities=20%  Similarity=0.290  Sum_probs=86.4

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC----cEEEEEecCCCCCCCCCCCCCCCce
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDR  110 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~----~~~~l~~~~~~~~~~~~~~~~~~~~  110 (160)
                      +++.++.|+.|.|+|++++++||+++|||++.....      ...++..++    ..+.|....           ..+..
T Consensus         4 ~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-----------~~~~~   66 (310)
T 3b59_A            4 SRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQGADEHHVVQLRRAD-----------ENRID   66 (310)
T ss_dssp             CCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEECTTSCCSCSEEEEECS-----------SCEEE
T ss_pred             eecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC------CeEEEEECCCCCCEEEEEEECC-----------CCCee
Confidence            567899999999999999999999999999876432      236677755    456665432           13367


Q ss_pred             EEEEEe---CCHHHHHHHHHHCCCeEecc------CCCceEEEEEcCCCCeEEEEeeC
Q 031406          111 HTCIAI---RDVSKLKMILDKAGISYTLS------KSGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       111 hi~f~v---~d~~~~~~~l~~~G~~~~~~------~~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |++|.|   +|+++++++|+++|+++...      +.+++.++|+||+||.|||++..
T Consensus        67 ~~~~~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  124 (310)
T 3b59_A           67 VIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDV  124 (310)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEECC
T ss_pred             EEEEEeCCHHHHHHHHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEcc
Confidence            999999   68999999999999988653      24578899999999999999754

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.70  E-value=6.2e-16  Score=115.39  Aligned_cols=109  Identities=19%  Similarity=0.227  Sum_probs=85.2

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CC---cEEEEEecCCCCCCCCCCCCCCC
Q 031406           33 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGR  108 (160)
Q Consensus        33 ~~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~---~~~~l~~~~~~~~~~~~~~~~~~  108 (160)
                      ..+++.++.|+.|.|+|++++++||+++|||++.....      ...++.. ++   ..+.+....           ..+
T Consensus        11 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-----------~~~   73 (323)
T 1f1u_A           11 PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQGP-----------IAA   73 (323)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS-----------SCE
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecC------CEEEEEecCCCCcEEEEEEECC-----------CCC
Confidence            44578899999999999999999999999999876432      2356664 32   245544321           123


Q ss_pred             ceEEEEEe---CCHHHHHHHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEee
Q 031406          109 DRHTCIAI---RDVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       109 ~~hi~f~v---~d~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      ..|++|.|   +|+++++++|+++|+++...+     .+++.++|+||+||.|||++.
T Consensus        74 ~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~  131 (323)
T 1f1u_A           74 VAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYE  131 (323)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             eeEEEEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEe
Confidence            68999999   689999999999999986543     346899999999999999875

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.69  E-value=7.3e-16  Score=115.80  Aligned_cols=108  Identities=13%  Similarity=0.259  Sum_probs=83.5

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CC---cEEEEEecCCCCCCCCCCCCCCCc
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGRD  109 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~---~~~~l~~~~~~~~~~~~~~~~~~~  109 (160)
                      .+.+.+|+||.|.|+|++++++||+++|||++.....      ...++.. ++   ..+.+....           ..+.
T Consensus         6 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-----------~~g~   68 (339)
T 3lm4_A            6 RFDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKITEAP-----------EAGM   68 (339)
T ss_dssp             GGSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET------TEEEEECTTCSSSCSEEEEECS-----------SCEE
T ss_pred             CCCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC------CEEEEEecCCCCceEEEEeeCC-----------CCCc
Confidence            4568899999999999999999999999999886532      2355555 22   223333322           1236


Q ss_pred             eEEEEEeCC---HHHHHHHHHHCCCeEeccC---CCceEEEEEcCCCCeEEEEee
Q 031406          110 RHTCIAIRD---VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       110 ~hi~f~v~d---~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      .|++|.|+|   +++++++|+++|+++...+   .+++.++|+|||||.|||+..
T Consensus        69 ~~~af~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~  123 (339)
T 3lm4_A           69 GHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQSPDGHNLQLLWE  123 (339)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCEEEECCSTTBCCEEEEECTTCCEEEEECC
T ss_pred             ceEEEEeCCHHHHHHHHHHHHHCCCceeeccCCCCceEEEEEECCCCCEEEEEEe
Confidence            899999997   8899999999999987543   347899999999999999863

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.69  E-value=2e-16  Score=117.02  Aligned_cols=112  Identities=16%  Similarity=0.151  Sum_probs=79.9

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCC---CCCCcceEEEEeCCc--EEEEEecCCCCCCCCCCCCCCCce
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPH---DKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDR  110 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~---~~~~~~~~~~~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~  110 (160)
                      .+.+++|+.|.|+|++++++|| ++|||++......   +.......|+..++.  .+.+....         . ..+..
T Consensus       143 ~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~  211 (305)
T 2wl9_A          143 EGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHSLAFGVGP---------M-DKRIN  211 (305)
T ss_dssp             TTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSSSCSEEECCSC---------C-SSSEE
T ss_pred             CCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCCceEEEEecCC---------C-CCCce
Confidence            4568999999999999999999 9999998643211   110123466666532  23332211         1 13468


Q ss_pred             EEEEEeCC---HHHHHHHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEee
Q 031406          111 HTCIAIRD---VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       111 hi~f~v~d---~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      |++|.|+|   +++++++|+++|+++...+     ++.+.+||+|||||.|||++.
T Consensus       212 hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  267 (305)
T 2wl9_A          212 HLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWG  267 (305)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeC
Confidence            99999998   5668899999999987542     235678999999999999874

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.69  E-value=1.2e-15  Score=115.78  Aligned_cols=107  Identities=21%  Similarity=0.255  Sum_probs=83.0

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCc----EEEEEecCCCCCCCCCCCCCCCc
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRD  109 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~----~~~l~~~~~~~~~~~~~~~~~~~  109 (160)
                      ...+.+|.||.|.|+|++++++||+++|||++....+      ..+++..++.    .+.+....           ..++
T Consensus        12 ~p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~~~-----------~~gl   74 (365)
T 4ghg_A           12 APDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTKGP-----------VAAL   74 (365)
T ss_dssp             CCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS-----------SCEE
T ss_pred             CCCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEeccCC-----------CCCc
Confidence            3467899999999999999999999999999887543      2366776432    23333221           1247


Q ss_pred             eEEEEEeC---CHHHHHHHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEe
Q 031406          110 RHTCIAIR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       110 ~hi~f~v~---d~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~  157 (160)
                      .|++|.|.   +++++.++|+++|+.+...+     .+++.++|.|||||.|||+.
T Consensus        75 ~~~a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~  130 (365)
T 4ghg_A           75 KAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFF  130 (365)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEEC
T ss_pred             ceEEEEeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEE
Confidence            89999997   57888999999999987543     34688999999999999985

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.68  E-value=1.7e-15  Score=103.05  Aligned_cols=117  Identities=11%  Similarity=0.079  Sum_probs=78.8

Q ss_pred             eeeeEEEEeCC--HHHHHHHHHHhcCCEEeeec-------CCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCC--CC
Q 031406           39 SVHHVGILCEN--LERSLEFYQNILGLEINEAR-------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEH--GG  107 (160)
Q Consensus        39 ~i~hv~l~v~D--~~~a~~Fy~~~lG~~~~~~~-------~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~--~~  107 (160)
                      .-.++.|.|+|  +++|++||+++|||++....       ..+........+..++..+.+.........  ....  +.
T Consensus        24 ~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g~~l~l~~~~~~~~~--~~~~~~~~  101 (166)
T 1xy7_A           24 TEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGF--STAKSEGS  101 (166)
T ss_dssp             EEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTC--CCCCTTSC
T ss_pred             ceEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECCeEEEEeCCCcccCC--ccccCCCC
Confidence            34688899999  99999999999999987532       111112233446677776666542111000  0111  12


Q ss_pred             CceEEEEEeCCHHHHHHHHHHCCCeEeccCC-----CceEEEEEcCCCCeEEEEeeC
Q 031406          108 RDRHTCIAIRDVSKLKMILDKAGISYTLSKS-----GRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       108 ~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~~-----g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      + .|++|.|+|+++++++|+++|.+ ..++.     .++.++|+||+||.|+|++..
T Consensus       102 g-~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~~r~~~v~DP~G~~~~l~~~~  156 (166)
T 1xy7_A          102 G-VTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVELGFKGKVTDPFGVTWIFAEKK  156 (166)
T ss_dssp             C-CEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHTTEEEEEECTTSCEEEEEC--
T ss_pred             c-EEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcccEEEEEECCCCCEEEEEeec
Confidence            2 48999999999999999999999 65431     168999999999999998853

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.68  E-value=2.7e-16  Score=118.91  Aligned_cols=126  Identities=14%  Similarity=0.246  Sum_probs=91.3

Q ss_pred             CceeeeeeeEEEEeC--CHHHHHHHHHHhcCCEEeeecC--CCCCCcceEEEEeC--CcEEEEEecCCCCCCC--C---C
Q 031406           34 DYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARP--HDKLPYRGAWLWVG--AEMIHLMELPNPDPLS--G---R  102 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~--D~~~a~~Fy~~~lG~~~~~~~~--~~~~~~~~~~~~~g--~~~~~l~~~~~~~~~~--~---~  102 (160)
                      .+++.+|+|++|.|+  |++++.+||+++|||+......  .+.......|+..+  ...+.|.+........  .   .
T Consensus       153 ~~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~l~~~~~~~~~~~~~~~~~  232 (357)
T 2r5v_A          153 DVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEFLK  232 (357)
T ss_dssp             TCCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTSCCEEEEEEECTTSBCCHHHHHHH
T ss_pred             CCCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCCCEEEEEeeecCCCCCchhHHHHH
Confidence            456789999999999  9999999999999999875321  12222345667764  4578887765321110  0   0


Q ss_pred             CCCCCCceEEEEEeCCHHHHHHHHHHCCCeEeccC------CCc---------------eEEEEEcCCCCeEEEEeeC
Q 031406          103 PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK------SGR---------------PAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       103 ~~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~------~g~---------------~~~~~~DPdG~~ie~~~~~  159 (160)
                      ...+.+++||||.|+|+++++++|+++|+++...+      .+.               ..+|++||||+.|+|++.+
T Consensus       233 ~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~~  310 (357)
T 2r5v_A          233 DHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTAS  310 (357)
T ss_dssp             HHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBCC
T ss_pred             hcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEccC
Confidence            00235689999999999999999999999986543      111               3699999999999999843

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.67  E-value=5.8e-16  Score=113.99  Aligned_cols=112  Identities=13%  Similarity=0.242  Sum_probs=81.0

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCC---CCCCcceEEEEeCC--cEEEEEecCCCCCCCCCCCCCCCce
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPH---DKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDR  110 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~---~~~~~~~~~~~~g~--~~~~l~~~~~~~~~~~~~~~~~~~~  110 (160)
                      .+.+++|+.|.|+|++++++||+++|||++......   +.......|+..++  ..+.+...  +       . ..+..
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~--~-------~-~~~~~  208 (297)
T 1lgt_A          139 GEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLAIAAF--P-------L-PKRIH  208 (297)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECC--C-------C-SSSEE
T ss_pred             CccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCCcceEEEEcC--C-------C-CCCce
Confidence            457899999999999999999999999998753211   11112345666543  24555532  1       1 23468


Q ss_pred             EEEEEeCCHHHHH---HHHHHCCCeEeccC----CC-ceEEEEEcCCCCeEEEEee
Q 031406          111 HTCIAIRDVSKLK---MILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       111 hi~f~v~d~~~~~---~~l~~~G~~~~~~~----~g-~~~~~~~DPdG~~ie~~~~  158 (160)
                      |++|.|+|++++.   ++ +++|+++...+    .+ .+.+||+|||||.|||++.
T Consensus       209 hiaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  263 (297)
T 1lgt_A          209 HFMLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWS  263 (297)
T ss_dssp             EEEEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEEC
T ss_pred             EEEEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecC
Confidence            9999999988776   88 99999987542    22 4568999999999999874

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.67  E-value=4.6e-16  Score=114.28  Aligned_cols=113  Identities=17%  Similarity=0.212  Sum_probs=80.6

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCC--CC-CcceEEEEeCC--cEEEEEecCCCCCCCCCCCCCCCc
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KL-PYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRD  109 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~--~~-~~~~~~~~~g~--~~~~l~~~~~~~~~~~~~~~~~~~  109 (160)
                      +.+.+++|+.|.|+|++++++||+++|||++......+  .. .....|+..++  ..+.+.....          ..+.
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~  207 (292)
T 1kw3_B          138 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFPI----------PKRI  207 (292)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCSC----------SSSE
T ss_pred             cCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCCcceEEEecCCC----------CCce
Confidence            45678999999999999999999999999987532211  00 12345666643  2344443211          1346


Q ss_pred             eEEEEEeCCHHH---HHHHHHHCCCeEeccC----C-CceEEEEEcCCCC-eEEEEee
Q 031406          110 RHTCIAIRDVSK---LKMILDKAGISYTLSK----S-GRPAIFTRDPDAN-ALEFTQV  158 (160)
Q Consensus       110 ~hi~f~v~d~~~---~~~~l~~~G~~~~~~~----~-g~~~~~~~DPdG~-~ie~~~~  158 (160)
                      .|++|.|+|+++   ++++|+ +|+++...+    . ..+.+||+||||| .|||++.
T Consensus       208 ~hiaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~  264 (292)
T 1kw3_B          208 HHFMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWG  264 (292)
T ss_dssp             EEEEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             EEEEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEEC
Confidence            899999998765   678999 999886543    2 3567899999999 9999874

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.67  E-value=3.4e-16  Score=115.69  Aligned_cols=112  Identities=14%  Similarity=0.152  Sum_probs=77.9

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCC--CC-CcceEEEEeCCc--EEEEEecCCCCCCCCCCCCCCCce
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KL-PYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDR  110 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~--~~-~~~~~~~~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~  110 (160)
                      ...+++|+.|.|+|++++++|| ++|||+.......+  .. .....|+..++.  .+.+..  .+       . .++..
T Consensus       146 ~~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~-------~-~~~~~  214 (302)
T 2ehz_A          146 GDQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNARDHSIAFGA--MP-------A-AKRLN  214 (302)
T ss_dssp             GGGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSBSCSEEECS--CC-------C-SSSEE
T ss_pred             CCCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCCCcEEEEec--CC-------C-CCcee
Confidence            3458999999999999999999 99999976432111  11 123345555432  233221  11       1 13468


Q ss_pred             EEEEEeCCHHH---HHHHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEee
Q 031406          111 HTCIAIRDVSK---LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       111 hi~f~v~d~~~---~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      |++|.|+|+++   ++++|+++|+++...+     .+.+.+||+|||||.|||+..
T Consensus       215 hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~  270 (302)
T 2ehz_A          215 HLMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWR  270 (302)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEEC
Confidence            99999998765   6779999999987532     235789999999999999864

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.64  E-value=8.1e-15  Score=107.55  Aligned_cols=109  Identities=14%  Similarity=0.078  Sum_probs=79.0

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC----cEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~----~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      ...++.+.|+|+++|++||+++|||+.......+   ....++..++    ..+.+...+..        .++...+++|
T Consensus       183 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~  251 (301)
T 2zw5_A          183 LAVITELPVRDVAATLRLVEAALGARTAFAIGDP---PEFAEAALTPWSAGPRFRLAAVPGP--------GPVEPVRLHL  251 (301)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT---EEEEEEESSSSSSSSEEEEEECCCS--------SCCCCCEEEE
T ss_pred             ceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC---ccEEEEEcCCCccccccccccCCCc--------CCCCceEEEE
Confidence            3467888999999999999999999987433221   1223455555    33433221111        1122368999


Q ss_pred             EeC-CHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEee
Q 031406          115 AIR-DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       115 ~v~-d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      .|+ |+++++++++++|+++..++    .|.+.++|+|||||.|+|.++
T Consensus       252 ~v~~dvd~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          252 DAAGTADSLHRRAVDAGARVDGPPVRRPWGRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             EcCccHHHHHHHHHHcCCccccCcccCCCcceEEEEECCCCCEEEeeCC
Confidence            999 99999999999999986543    466899999999999999985

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.61  E-value=7.2e-14  Score=91.83  Aligned_cols=113  Identities=12%  Similarity=0.121  Sum_probs=78.4

Q ss_pred             eeeeEEEEeC--CHHHHHHHHHHhc-CCEEeee--cCC----CCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCc
Q 031406           39 SVHHVGILCE--NLERSLEFYQNIL-GLEINEA--RPH----DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRD  109 (160)
Q Consensus        39 ~i~hv~l~v~--D~~~a~~Fy~~~l-G~~~~~~--~~~----~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~  109 (160)
                      ++. ..|.+.  |+++|++||+++| |+++...  ...    +......+.+..++..+.+........   . ..+. .
T Consensus         6 ~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~~~---~-~~~~-~   79 (136)
T 1u7i_A            6 RVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRHA---F-DFTP-A   79 (136)
T ss_dssp             EEE-EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCCS---C-CCCT-T
T ss_pred             cce-EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCEEEEEECCCCCCC---C-CCCC-c
Confidence            444 677886  9999999999999 9998742  211    111222344666776665544321111   0 0112 2


Q ss_pred             eEEEEEeCC---HHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEee
Q 031406          110 RHTCIAIRD---VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       110 ~hi~f~v~d---~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      .+++|.|+|   +++++++|+ +|.++..++    +|.+.++++||+||.|+|.++
T Consensus        80 ~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           80 FSFFVDCESNAQIERLAEALS-DGGKALMPLGDYGFSQRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             EEEEEECCCHHHHHHHHHHHH-TTSEEEEEEECCSSSSEEEEEECTTSCEEEEEEC
T ss_pred             eEEEEEcCCHHHHHHHHHHHH-cCCEEecccccCCCcceEEEEECCCCCEEEEEec
Confidence            579999999   999999999 999987653    567899999999999999874

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.61  E-value=8.2e-14  Score=93.01  Aligned_cols=112  Identities=13%  Similarity=0.013  Sum_probs=77.0

Q ss_pred             eEEEEeC-CHHHHHHHHHHhcCCEEeeec--CC-------CC---CCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCC
Q 031406           42 HVGILCE-NLERSLEFYQNILGLEINEAR--PH-------DK---LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGR  108 (160)
Q Consensus        42 hv~l~v~-D~~~a~~Fy~~~lG~~~~~~~--~~-------~~---~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~  108 (160)
                      +..|.|. |+++|++||+++||+++....  ..       +.   .....+.+..++..+.+........   .+. ..+
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~l~~~d~~~~~~---~~~-~~g   81 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPAYP---YEG-IKG   81 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCTTSC---CCC-CCS
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCEEEEEEcCCCccC---CCC-CCc
Confidence            4788898 999999999999999987531  11       00   1122234666777666554321101   111 122


Q ss_pred             ceEEEEEeCC---HHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEeeC
Q 031406          109 DRHTCIAIRD---VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       109 ~~hi~f~v~d---~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                       .+++|.|+|   +++++++|+ +|.++..++    +|.+.++++||+|+.|+|.+..
T Consensus        82 -~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG~r~~~v~Dp~G~~w~l~~~~  137 (149)
T 1u6l_A           82 -CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCEQ  137 (149)
T ss_dssp             -EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTEEEEEEEECTTSCEEEEEESC
T ss_pred             -eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcccceEEEECCCCCEEEEEEec
Confidence             589999998   789999985 788886543    5668899999999999998753

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.61  E-value=2.2e-14  Score=109.40  Aligned_cols=125  Identities=13%  Similarity=0.110  Sum_probs=92.3

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCC--CCCCcceEEEEeCCcEEEEEecCCCCCC----CC--CCCC
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPH--DKLPYRGAWLWVGAEMIHLMELPNPDPL----SG--RPEH  105 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~--~~~~~~~~~~~~g~~~~~l~~~~~~~~~----~~--~~~~  105 (160)
                      ++.+.+++||.|.|+|++++++||+++|||++......  .......+.+..++..+.|.....+...    ..  ...+
T Consensus        17 ~~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~   96 (381)
T 1t47_A           17 PFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEH   96 (381)
T ss_dssp             CSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHH
T ss_pred             CCcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecCCEEEEEecCCCCCCcchhHHHHHHHhc
Confidence            46678999999999999999999999999998875321  1112234555667778888875332211    00  0012


Q ss_pred             CCCceEEEEEeCCHHHHHHHHHHCCCeEeccC-----C-C-ceEEEEEcCCCCeEEEEee
Q 031406          106 GGRDRHTCIAIRDVSKLKMILDKAGISYTLSK-----S-G-RPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       106 ~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~-----~-g-~~~~~~~DPdG~~ie~~~~  158 (160)
                      +.++.|+||.|+|+++++++++++|+++..++     . + .+...++||+|+.++|++.
T Consensus        97 g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~  156 (381)
T 1t47_A           97 GDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDR  156 (381)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             CCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEec
Confidence            45689999999999999999999999987543     1 2 2467899999999999985

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.60  E-value=1.2e-14  Score=112.18  Aligned_cols=126  Identities=13%  Similarity=0.116  Sum_probs=91.3

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCC--CCCcceEEEEeCCcEEEEEecCCCCC-----------C-
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KLPYRGAWLWVGAEMIHLMELPNPDP-----------L-   99 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~--~~~~~~~~~~~g~~~~~l~~~~~~~~-----------~-   99 (160)
                      .+.+.+++||.|.|+|+++|++||++.|||++......+  ......+.+..++..+.|.....+..           + 
T Consensus        20 ~~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g~~~l~L~~~~~~~~~~~~~~~~~~~p~   99 (424)
T 1sqd_A           20 KFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASI   99 (424)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSS
T ss_pred             cccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCCCEEEEEecCCCCccccccccccccccc
Confidence            456789999999999999999999999999987654311  22234455667888888887743210           0 


Q ss_pred             CCC---------CCCCCCceEEEEEeCCHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEeeC
Q 031406          100 SGR---------PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       100 ~~~---------~~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      ...         ..++.++.|+||.|+|+++++++++++|+++...+    +..+...+++|+|+.++|++.+
T Consensus       100 ~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~~~~~~i~~~Gg~~~~lvd~~  172 (424)
T 1sqd_A          100 PSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYK  172 (424)
T ss_dssp             TTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEEC
T ss_pred             ccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCceEEEEEEcCCCcEEEEEecC
Confidence            000         01346689999999999999999999999986543    2235566778888888877654

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.58  E-value=8.3e-15  Score=110.69  Aligned_cols=123  Identities=15%  Similarity=0.092  Sum_probs=89.3

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCC--CCCCCCCceEE
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHT  112 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~--~~~~~~~~~hi  112 (160)
                      |.+.+++||.+.|+|++++.+||++.|||++.........  ..+.+..|+..+.+.....+.....  ...++.++.|+
T Consensus         1 ~~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g--~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~g~g~~~i   78 (357)
T 2r5v_A            1 MQNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH--RSIALRQGQVTLVLTEPTSDRHPAAAYLQTHGDGVADI   78 (357)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE--EEEEEEETTEEEEEEEESSTTSHHHHHHHHHSSEEEEE
T ss_pred             CCCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc--eEEEEEeCCEEEEEeCCCCCCCHHHHHHHhcCCeEEEE
Confidence            3567999999999999999999999999998865432211  3344556777777776322211000  01124568899


Q ss_pred             EEEeCCHHHHHHHHHHCCCeEeccC----CC-ceEEEEEcCCCCeEEEEeeC
Q 031406          113 CIAIRDVSKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       113 ~f~v~d~~~~~~~l~~~G~~~~~~~----~g-~~~~~~~DPdG~~ie~~~~~  159 (160)
                      +|.|+|+++++++++++|+++...+    .| .+...++||+|..++|++..
T Consensus        79 af~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~  130 (357)
T 2r5v_A           79 AMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRD  130 (357)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECC
T ss_pred             EEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecc
Confidence            9999999999999999999987543    22 25788999999999998853

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.56  E-value=4.5e-14  Score=107.10  Aligned_cols=113  Identities=18%  Similarity=0.260  Sum_probs=82.3

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcE--EEEEecCCCCCCCCCCCCCCCceE
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEM--IHLMELPNPDPLSGRPEHGGRDRH  111 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~--~~l~~~~~~~~~~~~~~~~~~~~h  111 (160)
                      ...+.+|.|++|.|.|++++..||+. |||.+......+.......|+.+++..  +.+....           +.+++|
T Consensus       147 ~~~~~rlgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~hH~la~~~~~-----------~~~lhH  214 (365)
T 4ghg_A          147 AGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGTVHDTALTGGN-----------GPRLHH  214 (365)
T ss_dssp             TTCCCEEEEEEEEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSSSCSEEEEESS-----------BSEEEE
T ss_pred             cccCcceeEEEEeecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCcccceeeecCC-----------CCceeE
Confidence            34567999999999999999999976 999988655444444456777776442  3333211           234899


Q ss_pred             EEEEeCCHHH---HHHHHHHCCCeE--ecc-----CCCceEEEEEcCCCCeEEEEee
Q 031406          112 TCIAIRDVSK---LKMILDKAGISY--TLS-----KSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       112 i~f~v~d~~~---~~~~l~~~G~~~--~~~-----~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      ++|+|+|+++   ++++|+++|+..  ...     .+...++||+||+||+||+...
T Consensus       215 vaf~v~d~d~v~~~~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~  271 (365)
T 4ghg_A          215 VAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQ  271 (365)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             EEEecCCHHHHHHHHHHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcC
Confidence            9999998776   467888899853  322     2346789999999999999763

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.51  E-value=7.7e-13  Score=87.33  Aligned_cols=111  Identities=9%  Similarity=0.100  Sum_probs=75.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhc-CCEEeee--cCC----CCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCce
Q 031406           38 VSVHHVGILCENLERSLEFYQNIL-GLEINEA--RPH----DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDR  110 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~l-G~~~~~~--~~~----~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~  110 (160)
                      .++....+.+.|.++|++||+++| |+++...  ...    +......+.+.+++..+.+..... . .   +  ..  .
T Consensus         4 ~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~~~m~~d~~~-~-~---~--~~--~   74 (139)
T 1tsj_A            4 PKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANS-G-T---E--LP--I   74 (139)
T ss_dssp             CSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC--------------C--C
T ss_pred             CceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCEEEEEECCCC-C-C---C--ce--E
Confidence            355555555669999999999999 9998742  111    111223344667776655543221 1 0   0  11  4


Q ss_pred             EEEEEeCC---HHHHHHHHHHCCCeEecc----CCCceEEEEEcCCCCeEEEEee
Q 031406          111 HTCIAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       111 hi~f~v~d---~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      .+++.|+|   +++++++|+ .|.++..+    .+|.+.++++||+|+.|+|...
T Consensus        75 sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  128 (139)
T 1tsj_A           75 SLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (139)
T ss_dssp             CEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             EEEEECCCHHHHHHHHHHHh-CCCEEeecccccCCCceEEEEECCCCCEEEEeec
Confidence            68899987   778899998 69888765    3678999999999999999874

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.49  E-value=8.6e-13  Score=101.66  Aligned_cols=125  Identities=13%  Similarity=0.106  Sum_probs=89.0

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCC--CCCcceEEEEeCCcEEEEEecCCCCC-----CCC-----
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KLPYRGAWLWVGAEMIHLMELPNPDP-----LSG-----  101 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~--~~~~~~~~~~~g~~~~~l~~~~~~~~-----~~~-----  101 (160)
                      .+.+.+++||.|.|+|++++.+||++.|||+.......+  ......+.+..|+..+.|.....+..     +..     
T Consensus        26 ~~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~~~l~L~~~~~~~~~~~~~p~~~~~~~  105 (418)
T 1sp8_A           26 RFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAA  105 (418)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHH
T ss_pred             cccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCCEEEEEecCCCCcccccccccccccch
Confidence            456789999999999999999999999999987654321  12234456677888888887643311     000     


Q ss_pred             -----CCCCCCCceEEEEEeCCHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEee
Q 031406          102 -----RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       102 -----~~~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                           ...++.++.|+||.|+|+++++++++++|+++...+    ++.+...+++|+|..++|++.
T Consensus       106 ~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~~~~~~i~~~Gg~~~~lvd~  171 (418)
T 1sp8_A          106 AARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSY  171 (418)
T ss_dssp             HHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEEC
T ss_pred             hHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCceEEEEEecCCCEEEEEEcc
Confidence                 002345689999999999999999999999986543    222344556667777766654

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.49  E-value=2.5e-13  Score=103.53  Aligned_cols=126  Identities=13%  Similarity=0.128  Sum_probs=88.3

Q ss_pred             CceeeeeeeEEEEeC--CHHHHHHHHHHhcCCEEeeecC-----CCCCCcceEEEEeC--CcEEEEEecCCCCCCCC---
Q 031406           34 DYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARP-----HDKLPYRGAWLWVG--AEMIHLMELPNPDPLSG---  101 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~--D~~~a~~Fy~~~lG~~~~~~~~-----~~~~~~~~~~~~~g--~~~~~l~~~~~~~~~~~---  101 (160)
                      ...+.+|+|+++.|+  |++++.+||+++|||+......     .+.......++..+  ...+.|.+.........   
T Consensus       179 ~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g~v~i~l~~~~~~~~~s~~~~  258 (381)
T 1t47_A          179 HRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDE  258 (381)
T ss_dssp             SCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHH
T ss_pred             CCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCCCcEEEEEecCCcCCCccHHHH
Confidence            346789999999999  9999999999999999876432     12223344555543  44677777652111100   


Q ss_pred             --CCCCCCCceEEEEEeCCHHHHHHHHHHCCCeEeccCCC---------------------ceEEEEEcCCCCeEEEEee
Q 031406          102 --RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSG---------------------RPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       102 --~~~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~~g---------------------~~~~~~~DPdG~~ie~~~~  158 (160)
                        ....+.+++||||.|+|+.+++++|+++|+++...+..                     ...++-+||+|..+.+.+.
T Consensus       259 ~l~~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~llqift~  338 (381)
T 1t47_A          259 YLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFTK  338 (381)
T ss_dssp             HHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEBC
T ss_pred             HHHHhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEEEEecc
Confidence              00134568999999999999999999999998664311                     1136678999988888764


Q ss_pred             C
Q 031406          159 D  159 (160)
Q Consensus       159 ~  159 (160)
                      +
T Consensus       339 ~  339 (381)
T 1t47_A          339 P  339 (381)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.48  E-value=2.9e-13  Score=103.28  Aligned_cols=125  Identities=14%  Similarity=0.125  Sum_probs=93.6

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCC-CC-CcceEEEEeCCcEEEEEecCCCCC-CCC--CCCCCCC
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-KL-PYRGAWLWVGAEMIHLMELPNPDP-LSG--RPEHGGR  108 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~-~~-~~~~~~~~~g~~~~~l~~~~~~~~-~~~--~~~~~~~  108 (160)
                      ...+.+++||.|.|+|++++.+||++.|||+.......+ .. ....+.+..|+..+.|.....+.. ...  ...+|.+
T Consensus         6 ~~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G~i~~~L~~p~~p~s~~~a~fl~~hG~G   85 (393)
T 3isq_A            6 RGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNKEMGDHLVKHGDG   85 (393)
T ss_dssp             SCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSE
T ss_pred             CCCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecCCEEEEEecCCCCCchHHHHHHHhcCCc
Confidence            446789999999999999999999999999988754322 11 122456677888888887544332 110  0123567


Q ss_pred             ceEEEEEeCCHHHHHHHHHHCCCeEeccC----C--C-ceEEEEEcCCCCeEEEEee
Q 031406          109 DRHTCIAIRDVSKLKMILDKAGISYTLSK----S--G-RPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       109 ~~hi~f~v~d~~~~~~~l~~~G~~~~~~~----~--g-~~~~~~~DPdG~~ie~~~~  158 (160)
                      +.|+||.|+|+++++++++++|+++..++    +  | .+...+++|.|..+.|++.
T Consensus        86 v~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr  142 (393)
T 3isq_A           86 VKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEK  142 (393)
T ss_dssp             EEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             EEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEecc
Confidence            89999999999999999999999997654    1  2 3567889999999888874

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.47  E-value=6.2e-12  Score=85.62  Aligned_cols=113  Identities=13%  Similarity=0.002  Sum_probs=79.6

Q ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEeeecCCC--------------CCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCC
Q 031406           41 HHVGILCENLERSLEFYQNILGLEINEARPHD--------------KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG  106 (160)
Q Consensus        41 ~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~--------------~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~  106 (160)
                      ....|.++|.++|++||+++||+++.......              ....-.+.+.+++..+.+....+..     +..+
T Consensus        27 i~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~~lm~~D~~g~~-----~~~~  101 (172)
T 3l20_A           27 LFPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGVKVLCSDSFGRA-----DKIN  101 (172)
T ss_dssp             EEEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTEEEEEEECTTCC-----CCCC
T ss_pred             EEEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCEEEEEECCCCCC-----CCCC
Confidence            45667777999999999999999976432211              1123346677788877776643111     1112


Q ss_pred             CCceEEEEEe--------CCHHHHHHHHHHCC-CeEecc----CCCceEEEEEcCCCCeEEEEeeC
Q 031406          107 GRDRHTCIAI--------RDVSKLKMILDKAG-ISYTLS----KSGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       107 ~~~~hi~f~v--------~d~~~~~~~l~~~G-~~~~~~----~~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      .+ ..+++.+        +|+++++++|++.| +++..+    ++|.+.++++||+|+.|.|...+
T Consensus       102 ~~-~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A          102 NG-ISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGGKMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             SS-EEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSSEEEEEECTTSCEEEEEEEC
T ss_pred             Cc-EEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCcEEEEEECCCCCEEEEEeCC
Confidence            22 4566766        58899999999999 688665    35778999999999999997643

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.46  E-value=4.5e-14  Score=106.80  Aligned_cols=126  Identities=13%  Similarity=0.094  Sum_probs=87.2

Q ss_pred             CceeeeeeeEEEEeC--CHHHHHHHHHHhcCCEEeeecCC--CCCCc--ceEEEEeCCcEEEEEec-CCCCCCCCC---C
Q 031406           34 DYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPH--DKLPY--RGAWLWVGAEMIHLMEL-PNPDPLSGR---P  103 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~--D~~~a~~Fy~~~lG~~~~~~~~~--~~~~~--~~~~~~~g~~~~~l~~~-~~~~~~~~~---~  103 (160)
                      ...+.+|+|+++.|+  |++++.+||+++|||+.......  +..+.  ...++..+...++|.+. .........   .
T Consensus       153 ~~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~~~~~~~~~~~~~~~~  232 (357)
T 1cjx_A          153 GAGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQ  232 (357)
T ss_dssp             TTSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHH
T ss_pred             CCCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCCCEEEEEeeecCCCCChHHHhHHh
Confidence            356789999999999  99999999999999998764321  11111  12222335668888876 332211100   0


Q ss_pred             CCCCCceEEEEEeCCHHHHHHHHHHCCCeEec-cC-------------CCc--------eEEEEEc----CCCCeEEEEe
Q 031406          104 EHGGRDRHTCIAIRDVSKLKMILDKAGISYTL-SK-------------SGR--------PAIFTRD----PDANALEFTQ  157 (160)
Q Consensus       104 ~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~-~~-------------~g~--------~~~~~~D----PdG~~ie~~~  157 (160)
                      ..+.+++|+||.|+|+++++++|+++|+++.. .+             .+.        ..++-+|    |+|++++|++
T Consensus       233 ~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqift  312 (357)
T 1cjx_A          233 FNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIFS  312 (357)
T ss_dssp             HTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEEB
T ss_pred             cCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEec
Confidence            12456899999999999999999999999866 33             111        1367788    8899999887


Q ss_pred             eC
Q 031406          158 VD  159 (160)
Q Consensus       158 ~~  159 (160)
                      .+
T Consensus       313 ~~  314 (357)
T 1cjx_A          313 ET  314 (357)
T ss_dssp             CC
T ss_pred             cC
Confidence            43

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.43  E-value=1.5e-13  Score=103.95  Aligned_cols=121  Identities=12%  Similarity=0.054  Sum_probs=85.1

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEE
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  113 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~  113 (160)
                      ++.+.+++||.+.|+|++++.+|| +.|||++.......    ..+.+..|+..+.+...+..........++.++.|++
T Consensus         7 ~~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~~----~~~l~~~g~~~l~l~~~~~~~~~~~~~~~g~gv~~ia   81 (357)
T 1cjx_A            7 PMGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRSK----NVHLYRQGEINLILNNEPNSIASYFAAEHGPSVCGMA   81 (357)
T ss_dssp             TTCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESSS----SEEEEEETTEEEEEECCSSSHHHHHHHHHSSEEEEEE
T ss_pred             CcccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCCe----eEEEEecCCEEEEEECCCCchhhhhhhhcCCeEEEEE
Confidence            356889999999999999999999 79999988754311    2344556776666654221100000002346689999


Q ss_pred             EEeCCHHHHHHHHHHCCCeEeccCCC---ceEEEEEcCCCCeEEEEeeC
Q 031406          114 IAIRDVSKLKMILDKAGISYTLSKSG---RPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       114 f~v~d~~~~~~~l~~~G~~~~~~~~g---~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |.|+|+++++++++++|+++...+.+   .....+++|+|..++|++..
T Consensus        82 f~V~D~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~~~~gg~~~~~vd~~  130 (357)
T 1cjx_A           82 FRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRF  130 (357)
T ss_dssp             EEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCC
T ss_pred             EEeCCHHHHHHHHHHcCCEEeecCCCCCcEEEEeeeCCCCeEEEEECCC
Confidence            99999999999999999998665422   24567788888888887643

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.37  E-value=4.3e-11  Score=78.80  Aligned_cols=110  Identities=9%  Similarity=0.049  Sum_probs=76.6

Q ss_pred             eEEEEeC-CHHHHHHHHHHhcC-CEEeee--cC----CCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEE
Q 031406           42 HVGILCE-NLERSLEFYQNILG-LEINEA--RP----HDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  113 (160)
Q Consensus        42 hv~l~v~-D~~~a~~Fy~~~lG-~~~~~~--~~----~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~  113 (160)
                      ...|.++ |.++|++||+++|| .++...  .+    ........+.+.+++..+.+.........    ..+. ..+++
T Consensus        12 ~P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~~lm~~d~~~~~~~----~~~~-~~~l~   86 (138)
T 3oms_A           12 TTFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQEFMCIDSYVNHNF----TFTP-AMSLY   86 (138)
T ss_dssp             CEEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEECSSCCSC----CCCT-TSCEE
T ss_pred             EEEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECCEEEEEEcCCCCCCC----CCCC-CEEEE
Confidence            4456666 89999999999999 565432  21    12223345667788887777754322111    1112 25799


Q ss_pred             EEeCC---HHHHHHHHHHCCCeEecc----CCCceEEEEEcCCCCeEEEEe
Q 031406          114 IAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       114 f~v~d---~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~ie~~~  157 (160)
                      +.|+|   +++++++|. .|.++..+    ++|.+..+++||+|+.|.|..
T Consensus        87 l~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg~~~~~~~Dp~G~~W~i~~  136 (138)
T 3oms_A           87 VTCETEEEIDTVFHKLA-QDGAILMPLGSYPFSKKFGWLNDKYGVSWQLTL  136 (138)
T ss_dssp             EEESSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEE
T ss_pred             EEcCCHHHHHHHHHHHH-cCCeEecCcccccCCcEEEEEECCCCCEEEEEe
Confidence            99999   999999995 57787654    367789999999999999875

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.37  E-value=3e-12  Score=98.78  Aligned_cols=104  Identities=16%  Similarity=0.170  Sum_probs=75.3

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCC-----CCcceEEEEe--CCcEEEEEecCC---CCCCCCC
Q 031406           33 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWV--GAEMIHLMELPN---PDPLSGR  102 (160)
Q Consensus        33 ~~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~-----~~~~~~~~~~--g~~~~~l~~~~~---~~~~~~~  102 (160)
                      ....+.+|+|+++.|.|++++.+||+++|||+.......+.     .+....++..  +...+.|.+...   ..+....
T Consensus       196 ~~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~~~l~l~e~~~~~~~~s~i~~  275 (424)
T 1sqd_A          196 LDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQT  275 (424)
T ss_dssp             CCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHH
T ss_pred             CcCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCCCcEEEEEecccccCCCcchhhh
Confidence            34467899999999999999999999999999887553221     2334456654  455788887742   1111111


Q ss_pred             C---CCCCCceEEEEEeCCHHHHHHHHHH----CCCeEecc
Q 031406          103 P---EHGGRDRHTCIAIRDVSKLKMILDK----AGISYTLS  136 (160)
Q Consensus       103 ~---~~~~~~~hi~f~v~d~~~~~~~l~~----~G~~~~~~  136 (160)
                      .   ..|.+++||||.|+|+.+++++|++    +|+++...
T Consensus       276 fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~  316 (424)
T 1sqd_A          276 YLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPS  316 (424)
T ss_dssp             HHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCC
T ss_pred             hhhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecC
Confidence            0   2356789999999999999999999    89998764

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.32  E-value=6.9e-12  Score=95.73  Aligned_cols=104  Identities=11%  Similarity=0.061  Sum_probs=75.4

Q ss_pred             CCceeeeeeeEEEEeCC--HHHHHHHHHHhcCCEEeeecC-----CCCCCcceEEEEe--CCcEEEEEecCC--CCCCCC
Q 031406           33 RDYGVVSVHHVGILCEN--LERSLEFYQNILGLEINEARP-----HDKLPYRGAWLWV--GAEMIHLMELPN--PDPLSG  101 (160)
Q Consensus        33 ~~~~~~~i~hv~l~v~D--~~~a~~Fy~~~lG~~~~~~~~-----~~~~~~~~~~~~~--g~~~~~l~~~~~--~~~~~~  101 (160)
                      ....+.+|+|+++.|.|  ++++..||+++|||+......     .+..+.+...+..  +..+++|.+...  ..+...
T Consensus       167 ~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~g~v~i~L~ep~~~~~~s~I~  246 (393)
T 3isq_A          167 PKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKKKSQIQ  246 (393)
T ss_dssp             CCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTTSSCEEEEEEEECCSBCCHHH
T ss_pred             CCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCCCCEEEEEecCCCCCCCCHHH
Confidence            34568899999999998  999999999999999876432     1122334444544  346888887754  221110


Q ss_pred             C---CCCCCCceEEEEEeCCHHHHHHHHHHCCCeEecc
Q 031406          102 R---PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS  136 (160)
Q Consensus       102 ~---~~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~  136 (160)
                      .   ...|.+++||||.|+|+.+++++|+++|+++...
T Consensus       247 ~fL~~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~  284 (393)
T 3isq_A          247 EYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSV  284 (393)
T ss_dssp             HHHHHHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCCC
T ss_pred             HHHHHcCCCCcceEEEEcCCHHHHHHHHHHcCCccCCC
Confidence            0   0136678999999999999999999999998653

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.31  E-value=8.7e-11  Score=83.22  Aligned_cols=111  Identities=14%  Similarity=0.055  Sum_probs=76.1

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEE---EEE
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT---CIA  115 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi---~f~  115 (160)
                      ...+.+|.|+|.+++.+||+++|||++.....      ..+.+..++....|+....+....   ....+..|+   ++.
T Consensus        10 ~~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~~~~L~lEEsp~~~~---~~~~Glkh~a~i~i~   80 (244)
T 3e0r_A           10 VRIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTGLEKLVLEEAPSMRT---RKVEGRKKLARLIVK   80 (244)
T ss_dssp             EEEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCEEEEEEECCTTTC---BCCCSSCSEEEEEEE
T ss_pred             EEEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCCcceEEEEeCCCccc---ccccccceeeeEEEE
Confidence            46778999999999999999999999877544      336666643332233322221111   123456777   599


Q ss_pred             eCCHHHHHHHHHHCCCeEec--cCCCceEEEEEcCCCCeEEEEeeC
Q 031406          116 IRDVSKLKMILDKAGISYTL--SKSGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       116 v~d~~~~~~~l~~~G~~~~~--~~~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      |++.+++..-|.. +..+..  ..+.++.+|+.||+||.||++.-+
T Consensus        81 vp~~~el~~lL~~-~~~~~~~~~gdhgyA~yl~dPEGn~ieiyae~  125 (244)
T 3e0r_A           81 VENPLEIEGILSK-TDSIHRLYKGQNGYAFEIFSPEDDLILIHAED  125 (244)
T ss_dssp             ESSHHHHHHHHTT-CSCCSEEEECSSSEEEEEECTTCCEEEEECCS
T ss_pred             cCCHHHHHHHHhc-ccccccccccCCcEEEEEECCCCCeEEEEEcC
Confidence            9998888766655 665532  334567899999999999998643

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.26  E-value=1.9e-11  Score=94.16  Aligned_cols=104  Identities=14%  Similarity=0.153  Sum_probs=74.9

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCC-----CCcceEEEEe--CCcEEEEEecCCC---CCCCCC
Q 031406           33 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWV--GAEMIHLMELPNP---DPLSGR  102 (160)
Q Consensus        33 ~~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~-----~~~~~~~~~~--g~~~~~l~~~~~~---~~~~~~  102 (160)
                      ....+.+|+|+++.|.|++++.+||+++|||+.......+.     .+....++..  +...+.|.+....   .+....
T Consensus       193 ~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~i~l~l~e~~~~~~~~s~i~~  272 (418)
T 1sp8_A          193 ADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQT  272 (418)
T ss_dssp             CCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHH
T ss_pred             CCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCCcEEEEEeecccccCCCcchhh
Confidence            34467899999999999999999999999999886543211     2334566665  3457777776421   111100


Q ss_pred             C---CCCCCceEEEEEeCCHHHHHHHHHH----CCCeEecc
Q 031406          103 P---EHGGRDRHTCIAIRDVSKLKMILDK----AGISYTLS  136 (160)
Q Consensus       103 ~---~~~~~~~hi~f~v~d~~~~~~~l~~----~G~~~~~~  136 (160)
                      .   ..|.+++||||.|+|+.+++++|++    +|+++...
T Consensus       273 fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~  313 (418)
T 1sp8_A          273 FLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAP  313 (418)
T ss_dssp             HHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCC
T ss_pred             hhhccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccC
Confidence            0   1356789999999999999999999    79998764

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.72  E-value=1e-06  Score=59.21  Aligned_cols=102  Identities=12%  Similarity=0.030  Sum_probs=70.4

Q ss_pred             EEEEeC-CHHHHHHHHHHhc-CCEEee--ecCC----C-CCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEE
Q 031406           43 VGILCE-NLERSLEFYQNIL-GLEINE--ARPH----D-KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  113 (160)
Q Consensus        43 v~l~v~-D~~~a~~Fy~~~l-G~~~~~--~~~~----~-~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~  113 (160)
                      ..|..+ |.++|.+||+++| |.++..  ..+.    + ....-.+.+.+++..+.+.....  ..  .+  .. ...++
T Consensus         9 PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~~~m~~d~~p--~~--~~--~~-~~sl~   81 (163)
T 1u69_A            9 ICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGGP--AF--RH--SE-AFSFQ   81 (163)
T ss_dssp             EEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECCT--TC--CC--CT-TEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCEEEEEECCCC--Cc--CC--CC-ceEEE
Confidence            456666 9999999999999 998774  2211    1 22344566778888777765321  11  11  12 24788


Q ss_pred             EEeCC---HHHHHHHHHHCCCeEeccCCCceEEEEEcCCCCeEEEEe
Q 031406          114 IAIRD---VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       114 f~v~d---~~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~ie~~~  157 (160)
                      +.|+|   +++++++|.+.|.++.      +...++||.|+.|-|..
T Consensus        82 v~~~d~~e~d~~~~~L~~~Gg~v~------~~G~v~D~fGv~W~i~~  122 (163)
T 1u69_A           82 VATDDQAETDRLWNAIVDNGGEES------ACGWCRDKWGISWQITP  122 (163)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCEEC------STTEEECTTSCEEEEEE
T ss_pred             EEeCCHHHHHHHHHHHHhCCCEEE------EEEEEECCCCCEEEEEe
Confidence            88887   6777899987788877      44589999999999875

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=98.69  E-value=2.3e-08  Score=72.73  Aligned_cols=99  Identities=11%  Similarity=0.180  Sum_probs=70.4

Q ss_pred             CccCCCceeeeeeeEEEEeCCHHHHHHHHHHhcC-----CEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCC------
Q 031406           29 IKEIRDYGVVSVHHVGILCENLERSLEFYQNILG-----LEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD------   97 (160)
Q Consensus        29 ~~~~~~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG-----~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~------   97 (160)
                      +.++...|+.+|+|+.+.|++++        .||     |++......+..+..+..+.+++.+++|+......      
T Consensus        14 ~~~~~~~M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fdg~YLElIai~~~~~~~~~~   85 (274)
T 3p8a_A           14 LVPRGSHMILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYINENYIELLDVENNEKLKKMA   85 (274)
T ss_dssp             -------CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECSSSEEEEEEESCHHHHHHHT
T ss_pred             cccCCcCccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeCCEEEEEEeecCcccccccc
Confidence            34555567889999999999883        467     88776444455667777788899999999987531      


Q ss_pred             ----C--CCCC----CCCCCCceEEEEEeCCHHHHHHHHHHCCCeEec
Q 031406           98 ----P--LSGR----PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL  135 (160)
Q Consensus        98 ----~--~~~~----~~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~  135 (160)
                          +  ....    ...+.++.++|+.++|+++..+++.++|+.+..
T Consensus        86 ~~~~~~~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~  133 (274)
T 3p8a_A           86 KTIEGGVAFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVG  133 (274)
T ss_dssp             TSTGGGTCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEE
T ss_pred             cccCccchHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCC
Confidence                1  0000    134668899999999999999999999998754

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=98.29  E-value=3e-06  Score=70.39  Aligned_cols=120  Identities=20%  Similarity=0.245  Sum_probs=74.3

Q ss_pred             eeeeeeEEEEe---CCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeC--CcEEEEEecCCCCC-----------C-
Q 031406           37 VVSVHHVGILC---ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDP-----------L-   99 (160)
Q Consensus        37 ~~~i~hv~l~v---~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g--~~~~~l~~~~~~~~-----------~-   99 (160)
                      +.+...+.+..   .-++++.+||++++++.......  . .....++...  ...+.+........           . 
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (941)
T 3opy_B            7 FNGTSFITLFAPNISLLQASIDFYTNFLGFAIRKNSN--Q-KLFWLQLEEDQNNVSIQLILDPEHAASVSQIDQNIRNLT   83 (941)
T ss_dssp             SCEEEEEEEECCC-CC-HHHHHHHHHTTCCEECSSCS--C-CC---EECCTTSCCEEEEECSSCSCHHHHHHHHHHHCCC
T ss_pred             ecceeEEEEEeCCHHHHHHHHHHHHhhccceeccccC--C-cceeEEEecCCCeEEEEEEeccccchhHHHHHHHHhhhh
Confidence            44666666665   67899999999999998655322  1 1112333222  33455443311100           0 


Q ss_pred             -CCCCCCC-CCceEEEEEeCCHHHHHHHHHHCCCeEeccCC--CceEEEEEcCCCCeEEEEeeC
Q 031406          100 -SGRPEHG-GRDRHTCIAIRDVSKLKMILDKAGISYTLSKS--GRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       100 -~~~~~~~-~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~~--g~~~~~~~DPdG~~ie~~~~~  159 (160)
                       ......+ +...|++|.+.|++++.+.|.+.+..+-..+.  +...+|+.||+||+|+|.+..
T Consensus        84 ~~~~~~dW~~~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~~~e~yt~DPlGNvIgfs~~~  147 (941)
T 3opy_B           84 RSLYRKDWRSIQSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEISPFEVYTVDPLGSLIGFSGFK  147 (941)
T ss_dssp             ----------CCCEEEEEESCHHHHHHHHHTTTCCCBCSSSSCSCEEECCSSCCEEEECC-CCS
T ss_pred             cccccccccccCceEEEEeCCHHHHHHHHHhcCCccccCCCcCCCceEEeECCCCCEEEEeccC
Confidence             0001112 22459999999999999999999998876654  677899999999999998754

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=97.41  E-value=0.00029  Score=50.01  Aligned_cols=89  Identities=9%  Similarity=0.106  Sum_probs=59.5

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeC--
Q 031406           40 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--  117 (160)
Q Consensus        40 i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~--  117 (160)
                      + ||.|.|.|.+++  ||++ +|+                     +.++.+.+..+.+-+... ...-++..+-|.++  
T Consensus       153 i-~I~LnV~d~~~s--Fy~~-~~~---------------------~~~~~F~~a~G~dl~~~~-~~t~gLe~l~~~v~~~  206 (244)
T 3e0r_A          153 I-SMELHLPTDIES--FLES-SEI---------------------GASLDFIPAQGQDLTVDN-TVTWDLSMLKFLVNEL  206 (244)
T ss_dssp             E-EEEEEECTTCCC--SCCH-HHH---------------------TTTEEEEECCCTTTTCCT-TSBSSEEEEEEEESSC
T ss_pred             E-EEEEEcCchHHH--Hhhc-cCC---------------------cccEEEEcccCCCCCCCC-CCccCceEEEEEeCHH
Confidence            6 999999999998  9986 433                     122444444444333222 22233567777776  


Q ss_pred             CHHHHHHHHHHCCCeEeccCCCceEEEEEcCCCCeEEEEe
Q 031406          118 DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       118 d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~ie~~~  157 (160)
                      |+.++.++|.+.|+-+.   .....+.+.||.|+.|-|.+
T Consensus       207 dl~~l~~~L~~~g~~id---kk~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          207 DIASLRQKFESTEYFIP---KSEKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             CHHHHHHHTTTSCEECC---TTCCEEEEECTTSCEEEEEE
T ss_pred             HHHHHHHHHHhCCceEc---ccCCEEEEECCCCCEEEEEE
Confidence            78899999998877322   23456888999999998765

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=96.67  E-value=0.017  Score=41.30  Aligned_cols=33  Identities=12%  Similarity=0.173  Sum_probs=30.2

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeee
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEA   68 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~   68 (160)
                      ..+.+++||.|.|.|++++.+|| +.|||+....
T Consensus       154 ~~i~glghV~L~v~d~~~~~~fl-~~LG~~~~~~  186 (252)
T 3pkv_A          154 DQLLSIGEINITTSDVEQAATRL-KQAELPVKLD  186 (252)
T ss_dssp             GGCCEEEEEEEECSCHHHHHHHH-HHTTCCCCGG
T ss_pred             HHCcEeeeEEEEeCCHHHHHHHH-HHcCCCcccC
Confidence            45789999999999999999999 9999998764

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=95.16  E-value=0.19  Score=32.03  Aligned_cols=53  Identities=11%  Similarity=0.195  Sum_probs=40.9

Q ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCeEeccC----------CCceEEEEEcCCCCeEEEEeeC
Q 031406          107 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK----------SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       107 ~~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~----------~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      .++.|+++.|.|++++.+...+ .|.++....          ..+...++.-.+|..+++.+.+
T Consensus        18 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   81 (156)
T 3kol_A           18 RKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEP   81 (156)
T ss_dssp             CCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECT
T ss_pred             ceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecC
Confidence            4579999999999999999987 799987521          1234567777788899998753

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=94.99  E-value=0.46  Score=40.14  Aligned_cols=49  Identities=24%  Similarity=0.266  Sum_probs=36.7

Q ss_pred             eEEEEEeCCHHHHHHHHHHCCCeEeccCCCceEEEEEcCCCCeEEEEee
Q 031406          110 RHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       110 ~hi~f~v~d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      ..+.|.+.|+.++.+.|.+..++.....-....+|..||=||.|.|...
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~~~~~~~  173 (989)
T 3opy_A          125 GEVTFFTASIDKLKAKLIEIGAEIIPSKIDLVEFSTRDPMGDVISFSSY  173 (989)
T ss_dssp             CEEEEECSCHHHHHHHHHHSSCCBCCCC--CCCEEEESSSEEEEECCSS
T ss_pred             ceEEEEeCcHHHHHHHhhhcccccCCCCCCceeEEEecCCCCEEeeecC
Confidence            5689999999999999988744333333234569999999999988654

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=94.91  E-value=0.14  Score=31.89  Aligned_cols=51  Identities=12%  Similarity=0.142  Sum_probs=37.4

Q ss_pred             CceEEEEEeCCHHHHHHHHHHCCCeEecc----CC-CceEEEEEcCCCCeEEEEeeC
Q 031406          108 RDRHTCIAIRDVSKLKMILDKAGISYTLS----KS-GRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       108 ~~~hi~f~v~d~~~~~~~l~~~G~~~~~~----~~-g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      .+.|+++.|+|++++.+.....|.++...    +. +.+..++.. +|..+++.++.
T Consensus         7 ~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~   62 (133)
T 3hdp_A            7 KVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAPD   62 (133)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEES
T ss_pred             eeCEEEEEECCHHHHHHHHHHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEecC
Confidence            47999999999999998888889988543    22 334444444 67788888753

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=94.76  E-value=0.047  Score=35.70  Aligned_cols=60  Identities=15%  Similarity=0.232  Sum_probs=42.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCC-CCCCcceEEE---EeCCcEEEEEecCCCCC
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPH-DKLPYRGAWL---WVGAEMIHLMELPNPDP   98 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~-~~~~~~~~~~---~~g~~~~~l~~~~~~~~   98 (160)
                      .++.|+++.|.|++++.+.+++ .|.++....+. ...+.+.+|+   ..+|..++|++......
T Consensus        78 ~g~~Hiaf~V~Did~~~~~l~~-~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~~~~  141 (161)
T 3oa4_A           78 EGIHHIAIGVKSIEERIQEVKE-NGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKEQAE  141 (161)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHH-TTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCCCCC
T ss_pred             CCeEEEEEEECCHHHHHHHHHH-CCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCCccc
Confidence            4789999999999999999987 89987653121 1223345566   23577899999876543

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=94.70  E-value=0.15  Score=31.23  Aligned_cols=52  Identities=15%  Similarity=0.158  Sum_probs=39.1

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-CCCeEecc----CCCceEEEEEcCCCCeEEEEeeC
Q 031406          108 RDRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       108 ~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~----~~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      .+.|+++.|.|++++.+...+ .|.++...    ..+...+++..++|..+++.+.+
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   59 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRT   59 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEET
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecC
Confidence            368999999999999988854 59888654    12335566666678999998764

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=94.63  E-value=0.19  Score=30.22  Aligned_cols=49  Identities=20%  Similarity=0.307  Sum_probs=37.3

Q ss_pred             ceEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEEcCCCCeEEEEee
Q 031406          109 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       109 ~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +.|+.+.|.|++++.+...+ .|.++....+ ....++..++|..+.+.+.
T Consensus         4 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~l~l~~~   53 (113)
T 1xqa_A            4 IKHLNLTVADVVAAREFLEKYFGLTCSGTRG-NAFAVMRDNDGFILTLMKG   53 (113)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHCCEEEEEET-TTEEEEECTTCCEEEEEEC
T ss_pred             eEEEEEEeCCHHHHHHHHHHhCCCEEeccCC-CcEEEEEcCCCcEEEEEeC
Confidence            68999999999999988876 7998875432 2345666667778888764

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=94.38  E-value=0.17  Score=31.10  Aligned_cols=54  Identities=20%  Similarity=0.302  Sum_probs=36.1

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEE
Q 031406           37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLM   91 (160)
Q Consensus        37 ~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~   91 (160)
                      ..++.|+++.|.|++++.+..++ .|.++.........+.+..++.. +|..++|+
T Consensus        79 ~~g~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  133 (134)
T 3l7t_A           79 ACGLRHLAFYVEDVEASRQELIA-LGIRVEEVRYDDYTGKKMAFFFDPDGLPLELH  133 (134)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHH-HTCCCCCCEECTTSCCEEEEEECTTCCEEEEE
T ss_pred             CCCeEEEEEEECCHHHHHHHHHh-CCCcccceeccCCCceEEEEEECCCCCEEEEe
Confidence            35789999999999999999987 88887543222222334445554 35566665

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=94.30  E-value=0.19  Score=32.49  Aligned_cols=53  Identities=15%  Similarity=0.131  Sum_probs=36.8

Q ss_pred             CCCceEEEEEeCCHHHHHHHHHH-CCCeEecc---C---------------CCceEEEEEcCCCCeEEEEeeC
Q 031406          106 GGRDRHTCIAIRDVSKLKMILDK-AGISYTLS---K---------------SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       106 ~~~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~---~---------------~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      -.++.|+++.|.|++++.+...+ .|.++...   +               .+.+..++ ...+..||+.++.
T Consensus        17 ~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~g~~~leL~~~~   88 (159)
T 3gm5_A           17 MRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFF-ELGPLQLELIEPD   88 (159)
T ss_dssp             GGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEE-EETTEEEEEEEEC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEE-ecCCEEEEEEEEC
Confidence            35579999999999999998876 89876431   1               12233333 4457789988763

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=94.25  E-value=0.22  Score=30.63  Aligned_cols=51  Identities=16%  Similarity=0.199  Sum_probs=36.7

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-CCCeEeccC---CCceEEEEEcCCCCeEEEEee
Q 031406          108 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK---SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       108 ~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~---~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      .+.|+++.|.|++++.+...+ .|.++....   ..+....+...++..+++.+.
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   59 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHP   59 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSSEEEEEEE
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCEEEEEEec
Confidence            378999999999999999988 899886531   222233334446778888764

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=93.70  E-value=0.24  Score=31.18  Aligned_cols=52  Identities=12%  Similarity=0.040  Sum_probs=39.1

Q ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCeEeccC----CCceEEEEEcCCC-----CeEEEEee
Q 031406          107 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK----SGRPAIFTRDPDA-----NALEFTQV  158 (160)
Q Consensus       107 ~~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~----~g~~~~~~~DPdG-----~~ie~~~~  158 (160)
                      ..+.|+.+.|.|++++.+...+ .|.++....    .+.+..++..+++     ..+++.+.
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~   69 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAP   69 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeec
Confidence            3478999999999999988874 799886532    2335667777765     78998875

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=93.52  E-value=0.43  Score=30.20  Aligned_cols=52  Identities=13%  Similarity=0.121  Sum_probs=37.5

Q ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEE-EcCCCCeEEEEee
Q 031406          107 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFT-RDPDANALEFTQV  158 (160)
Q Consensus       107 ~~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~-~DPdG~~ie~~~~  158 (160)
                      .++.|+++.|.|++++.+...+ .|.++..........++ .+..+..+++.+.
T Consensus        27 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   80 (141)
T 3ghj_A           27 KGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARRWNFLWVSGRAGMVVLQEE   80 (141)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             ceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCCcEEEEEecCCCcEEEEecc
Confidence            4478999999999999998866 79998765433333333 3445778888764

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=93.32  E-value=0.33  Score=35.11  Aligned_cols=51  Identities=14%  Similarity=0.111  Sum_probs=37.5

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEE
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLM   91 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~   91 (160)
                      ....+|.+|.|.+.|++++++.|+++||.+......  .    ..-+..++..+.+.
T Consensus       186 nGa~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~~~--~----~~~l~l~~~~i~f~  236 (274)
T 3p8a_A          186 QKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEEND--H----YTDLILKNDDIYFR  236 (274)
T ss_dssp             CTTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEECS--S----EEEEECTTCCCEEE
T ss_pred             CccceEEEEEEEeCCHHHHHHHHHHHhCCCccccCC--c----eEEEecCCcEEEEE
Confidence            346799999999999999999999999999875432  1    12245555555444

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=93.19  E-value=0.33  Score=30.48  Aligned_cols=50  Identities=14%  Similarity=0.136  Sum_probs=36.4

Q ss_pred             CceEEEEEeCCHHHHHHHHHHCCCeEeccCCCceEEEEEcCCCCeEEEEe
Q 031406          108 RDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       108 ~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~ie~~~  157 (160)
                      .+.|+.+.|.|++++.+...+.|.++...........+.-++|..+.+.+
T Consensus         4 ~l~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~   53 (138)
T 2a4x_A            4 RISLFAVVVEDMAKSLEFYRKLGVEIPAEADSAPHTEAVLDGGIRLAWDT   53 (138)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTTCCCCGGGGGCSEEEEECTTSCEEEEEE
T ss_pred             eeeEEEEEECCHHHHHHHHHHcCCcEEecCCCCceEEEEcCCCeEEEEec
Confidence            36899999999999998888889988654322234444445777888765

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=93.17  E-value=0.31  Score=30.84  Aligned_cols=56  Identities=16%  Similarity=0.146  Sum_probs=37.7

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecC
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP   94 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~   94 (160)
                      .++.|+.+.|.|++++.+..++ .|.++.........+.+..++.. +|..++|++..
T Consensus        94 ~g~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           94 LGYLRVMFTVEDIDEMVSRLTK-HGAELVGEVVQYENSYRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             BEEEEEEEEESCHHHHHHHHHH-TTCEESSCCEEETTTEEEEEEECGGGCEEEEEEEC
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCeecCCCcccCCceEEEEEECCCCCEEEEEecc
Confidence            4678999999999999999987 89887643211112334444544 45678887654

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=92.68  E-value=0.36  Score=29.30  Aligned_cols=53  Identities=17%  Similarity=0.322  Sum_probs=34.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEE
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLM   91 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~   91 (160)
                      .++.|+.+.|.|++++.+..++ .|.++.........+.+..++.. +|..++|+
T Consensus        72 ~g~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  125 (126)
T 2p25_A           72 LGLRHLAFKVEHIEEVIAFLNE-QGIETEPLRVDDFTGKKMTFFFDPDGLPLELH  125 (126)
T ss_dssp             SSCCCEEEECSCHHHHHHHHHH-TTCCCCCCEECTTTCCEEEEEECTTCCEEEEE
T ss_pred             ccceEEEEEeCCHHHHHHHHHH-cCCccccccccCCCCcEEEEEECCCCCEEEee
Confidence            3678999999999999999876 78876532211222333444443 45566654

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=92.39  E-value=0.94  Score=27.83  Aligned_cols=57  Identities=16%  Similarity=0.081  Sum_probs=37.1

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCc-ceEEEEe-CCcEEEEEecCCC
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-RGAWLWV-GAEMIHLMELPNP   96 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~-~~~~~~~-g~~~~~l~~~~~~   96 (160)
                      ++.|+.+.|.|++++.+..++ .|.++.........+. ...++.. +|..++|++....
T Consensus        71 ~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~  129 (135)
T 1f9z_A           71 AYGHIALSVDNAAEACEKIRQ-NGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  129 (135)
T ss_dssp             SEEEEEEECSCHHHHHHHHHH-TTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC---
T ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCCC
Confidence            678999999999999999876 8988765321112222 2344444 5678888886543

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=92.21  E-value=0.82  Score=27.98  Aligned_cols=54  Identities=9%  Similarity=0.234  Sum_probs=35.6

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEe
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME   92 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~   92 (160)
                      .+..|+.+.|.|++++.+...+ .|.++.........+.+..++.. +|..++|++
T Consensus        78 ~~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           78 GGYTGISLITRDIDEAYKTLTE-RGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHH-TTCEESSSCEECTTSCEEEEEECTTCEEEEEEE
T ss_pred             CCeEEEEEEeCCHHHHHHHHHH-CCCEeecCCCcCCCCCEEEEEECCCCCEEEEEe
Confidence            4678999999999999999987 79988642221222223444444 355666654

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=92.19  E-value=0.29  Score=30.51  Aligned_cols=50  Identities=8%  Similarity=0.045  Sum_probs=34.0

Q ss_pred             CceEEEEEeCCHHHHHHHHHHCCCeEecc-CCCceEEEEEcCCCCeEEEEe
Q 031406          108 RDRHTCIAIRDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       108 ~~~hi~f~v~d~~~~~~~l~~~G~~~~~~-~~g~~~~~~~DPdG~~ie~~~  157 (160)
                      .+.|+++.|.|++++.+...+.|+++... .+.+...++...+|..+++..
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~   56 (128)
T 3g12_A            6 LITSITINTSHLQGMLGFYRIIGFQFTASKVDKGSEVHRAVHNGVEFSLYS   56 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHTCCCEEC-----CCEEEEEETTEEEEEEE
T ss_pred             eEEEEEEEcCCHHHHHHHHHHCCCEEecccCCCCCEEEEEeCCCeEEEEEE
Confidence            36899999999999988887789888765 222234455434666777654

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=92.08  E-value=0.48  Score=29.52  Aligned_cols=49  Identities=8%  Similarity=-0.033  Sum_probs=35.2

Q ss_pred             ceEEEEEeCCHHHHHHHHHH-CCCeEeccCC-C--ceEEEEEcCCCCeEEEEee
Q 031406          109 DRHTCIAIRDVSKLKMILDK-AGISYTLSKS-G--RPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       109 ~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~-g--~~~~~~~DPdG~~ie~~~~  158 (160)
                      +.|+++.|.|++++.+...+ .|.++..... +  .....+.. +|..++|.+.
T Consensus         6 i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~   58 (136)
T 2rk0_A            6 VSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-GGLSIVLREH   58 (136)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-TSCEEEEEEE
T ss_pred             ccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-CCCEEEEEeC
Confidence            68999999999999888866 6998865322 1  22233334 7788998876

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=92.03  E-value=0.66  Score=30.67  Aligned_cols=55  Identities=15%  Similarity=0.244  Sum_probs=39.2

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecC
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP   94 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~   94 (160)
                      .++.|+.+.|.|++++.+-.++ .|.++......... ....++.. +|..++|++..
T Consensus       126 ~g~~hl~f~v~dv~~~~~~l~~-~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          126 RGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPDDGKM-KGLAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             CBEEEEEEECSCHHHHHHHHHH-TTCCEEECTTSSSS-TTCEEEECTTCCEEEEECGG
T ss_pred             CceeEEEEEECCHHHHHHHHHH-CCCeEeeCCccCCc-ceEEEEECCCCCEEEEEEcc
Confidence            4788999999999999999986 89988763322221 22345554 56788888764

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=91.96  E-value=0.75  Score=29.23  Aligned_cols=47  Identities=21%  Similarity=0.224  Sum_probs=33.5

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEEcCCCCeEEEEe
Q 031406          108 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       108 ~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~ie~~~  157 (160)
                      ++.|+++.|.|++++.+...+ .|.++....++.  .++. .+|..+++.+
T Consensus        23 ~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~~~--~~l~-~~~~~l~l~~   70 (152)
T 3huh_A           23 RIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQNR--KALI-FGAQKINLHQ   70 (152)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEETTTE--EEEE-ETTEEEEEEE
T ss_pred             eeeEEEEEeCCHHHHHHHHHhcCCCEEEEccCCe--EEEE-eCCeEEEEec
Confidence            468999999999999999988 899987664332  2222 2345666654

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=91.28  E-value=0.96  Score=29.84  Aligned_cols=55  Identities=15%  Similarity=0.212  Sum_probs=38.2

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecC
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP   94 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~   94 (160)
                      .++.|+.+.|.|++++.+.+++ .|.++........ ..+..++.. +|..++|++..
T Consensus       123 ~g~~hi~f~v~dvd~~~~~l~~-~G~~~~~~p~~~~-~~~~~~~~DPdG~~iel~~~~  178 (184)
T 2za0_A          123 RGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPDDGK-MKGLAFIQDPDGYWIEILNPN  178 (184)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHH-TTCCEEECTTSSS-STTCEEEECTTCCEEEEECTT
T ss_pred             CCeeEEEEEeCCHHHHHHHHHH-CCCeeecCCcCCC-ceeEEEEECCCCCEEEEEecC
Confidence            4678999999999999999987 7998765322111 123455554 56688887654

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=91.26  E-value=0.9  Score=27.78  Aligned_cols=48  Identities=17%  Similarity=0.252  Sum_probs=33.1

Q ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEEcCCCCeEEEEe
Q 031406          107 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       107 ~~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~ie~~~  157 (160)
                      .++.|+++.|.|++++.+...+ .|.++.....+.  .++. .+|..+++.+
T Consensus         9 ~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~~~--~~~~-~~~~~~~l~~   57 (133)
T 3ey7_A            9 SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAGR--IALE-FGHQKINLHQ   57 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEEEEETTTE--EEEE-ETTEEEEEEE
T ss_pred             cccCEEEEEECCHHHHHHHHHHccCceEEEecCCe--EEEE-cCCEEEEEEc
Confidence            3478999999999999988887 799987654322  2222 2345566654

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=90.76  E-value=0.56  Score=30.14  Aligned_cols=55  Identities=15%  Similarity=0.180  Sum_probs=36.8

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCC
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN   95 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~   95 (160)
                      ++.|+.+.|.|++++.+-.+. .|.++.........+ +.+++.- +|..++|++...
T Consensus        98 g~~~l~f~VdDvda~~~~l~~-~Gv~~~~~p~~~~~g-~~~~f~DPdGn~iel~q~~~  153 (155)
T 4g6x_A           98 GIPAASFAVDDIAAEYERLSA-LGVRFTQEPTDMGPV-VTAILDDTCGNLIQLMQIAY  153 (155)
T ss_dssp             TCCSEEEEESCHHHHHHHHHH-TTCCEEEEEEECSSC-EEEEEECSSSCEEEEEEC--
T ss_pred             CceEEEeeechhhhhhhHHhc-CCcEEeeCCEEcCCe-EEEEEECCCCCEEEEEEECC
Confidence            467899999999999999876 898875432222222 3444544 466888888643

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=89.69  E-value=1.7  Score=26.76  Aligned_cols=50  Identities=2%  Similarity=-0.134  Sum_probs=34.8

Q ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEEcCCCCeEEEEee
Q 031406          107 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       107 ~~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      ..+.|+.+.|.|++++.+...+ .|.++....+  ....+...+|..+.+.+.
T Consensus        12 ~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~l~l~~~   62 (132)
T 3sk2_A           12 ITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP--RYVAFPSSGDALFAIWSG   62 (132)
T ss_dssp             CCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS--SEEEEECSTTCEEEEESS
T ss_pred             ceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC--CEEEEEcCCCcEEEEEeC
Confidence            3478999999999999888775 6887754432  234455556677777653

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=89.58  E-value=2.1  Score=26.79  Aligned_cols=51  Identities=20%  Similarity=0.191  Sum_probs=36.9

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-CCCeEeccC---CC-ceEEEEEcCC---CCeEEEEee
Q 031406          108 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK---SG-RPAIFTRDPD---ANALEFTQV  158 (160)
Q Consensus       108 ~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~---~g-~~~~~~~DPd---G~~ie~~~~  158 (160)
                      .+.|+.+.|.|++++.+...+ .|.++....   .+ ....++.-++   +..+++.+.
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~   66 (144)
T 2c21_A            8 RMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN   66 (144)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEE
T ss_pred             eeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEec
Confidence            368999999999999998875 799886532   22 2345555554   578888875

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=89.44  E-value=1.8  Score=26.35  Aligned_cols=53  Identities=11%  Similarity=0.079  Sum_probs=36.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEec
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMEL   93 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~   93 (160)
                      .+..|+.+.|.|++++.+..++ .|.++.....  ..+.+..++.. +|..+++.+.
T Consensus        71 ~~~~~~~f~v~d~~~~~~~l~~-~G~~~~~~~~--~~g~~~~~~~DPdG~~iel~~~  124 (126)
T 2qqz_A           71 AKRAHPAFYVLKIDEFKQELIK-QGIEVIDDHA--RPDVIRFYVSDPFGNRIEFMEN  124 (126)
T ss_dssp             CSSSCEEEEETTHHHHHHHHHH-TTCCCEEECS--STTEEEEEEECTTSCEEEEEEE
T ss_pred             CCceEEEEEcCCHHHHHHHHHH-cCCCccCCCC--CCCeeEEEEECCCCCEEEEEeC
Confidence            4678999999999999999877 7988765432  22234444444 4667777764

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=89.03  E-value=1.3  Score=26.52  Aligned_cols=53  Identities=15%  Similarity=0.196  Sum_probs=34.4

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEe
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME   92 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~   92 (160)
                      ...|+.+.|.|++++.+...+ .|.++.........+.+..++.. +|..+++++
T Consensus        64 ~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~  117 (119)
T 2pjs_A           64 DVPDLSIEVDNFDEVHARILK-AGLPIEYGPVTEAWGVQRLFLRDPFGKLINILS  117 (119)
T ss_dssp             CCCSEEEEESCHHHHHHHHHH-TTCCCSEEEEECTTSCEEEEEECTTSCEEEEEE
T ss_pred             ceeEEEEEECCHHHHHHHHHH-CCCccccCCccCCCccEEEEEECCCCCEEEEEe
Confidence            457999999999999999876 78876543211122234445544 455677665

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=88.82  E-value=2  Score=27.16  Aligned_cols=49  Identities=18%  Similarity=0.152  Sum_probs=35.2

Q ss_pred             CCceEEEEEeCCHHHHHHHH----HHCCCeEeccCCCceEEEEEcCCCCeEEEEee
Q 031406          107 GRDRHTCIAIRDVSKLKMIL----DKAGISYTLSKSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       107 ~~~~hi~f~v~d~~~~~~~l----~~~G~~~~~~~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      ..+.|+++.|.|++++.+..    ...|.++......+. .++.  +|..++|.+.
T Consensus        19 ~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~~~-~~~~--g~~~l~l~~~   71 (146)
T 3ct8_A           19 GMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSRGK-SYKH--GKTYLVFVQT   71 (146)
T ss_dssp             TSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETTEE-EEEE--TTEEEEEEEC
T ss_pred             cceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCCCc-eEec--CCeEEEEEEc
Confidence            44789999999999998877    558999876443322 3444  5677888764

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=88.31  E-value=1.9  Score=27.26  Aligned_cols=31  Identities=19%  Similarity=0.337  Sum_probs=26.1

Q ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCeEeccC
Q 031406          107 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK  137 (160)
Q Consensus       107 ~~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~  137 (160)
                      .++.|+.+.|.|++++.+...+ .|.++....
T Consensus        26 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~   57 (147)
T 3zw5_A           26 RRLDHIVMTVKSIKDTTMFYSKILGMEVMTFK   57 (147)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEEET
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEecC
Confidence            3478999999999999988887 799987544

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=88.27  E-value=2.1  Score=27.11  Aligned_cols=48  Identities=15%  Similarity=0.099  Sum_probs=35.0

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEEcCCCCeEEEEee
Q 031406          108 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       108 ~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      .+.|+.+.|.|++++.+...+ .|.++....  ....++.. +|..+++.+.
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~--~~~~~~~~-~~~~l~l~~~   53 (150)
T 3bqx_A            5 QVAVITLGIGDLEASARFYGEGFGWAPVFRN--PEIIFYQM-NGFVLATWLV   53 (150)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTSCCCCSEEC--SSEEEEEC-SSSEEEEEEH
T ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEeecCC--CCEEEEEc-CCEEEEEEec
Confidence            368999999999999988876 798876543  22344443 6778888764

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=88.02  E-value=1.4  Score=27.95  Aligned_cols=49  Identities=8%  Similarity=-0.014  Sum_probs=34.2

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEEcCCCCeEEEEee
Q 031406          108 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       108 ~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      .+.|+.+.|.|++++.+...+ .|.++....++  ..++.-.+|..++|.+.
T Consensus        25 ~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~l~l~~~   74 (144)
T 2kjz_A           25 HPDFTILYVDNPPASTQFYKALLGVDPVESSPT--FSLFVLANGMKLGLWSR   74 (144)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHTCCCSEEETT--EEEEECTTSCEEEEEET
T ss_pred             ceeEEEEEeCCHHHHHHHHHHccCCEeccCCCC--eEEEEcCCCcEEEEEeC
Confidence            468999999999999888876 68877543322  33444445777777653

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=87.57  E-value=1.7  Score=27.75  Aligned_cols=47  Identities=6%  Similarity=-0.077  Sum_probs=34.2

Q ss_pred             ceEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEEcCCCCeEEEEe
Q 031406          109 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       109 ~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~ie~~~  157 (160)
                      +.|+.+.|.|++++.+...+ .|.++....+  ...++.-++|..+.+..
T Consensus         7 i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~~~~~~~~g~~l~l~~   54 (148)
T 3rhe_A            7 PNLVLFYVKNPAKSEEFYKNLLDTQPIESSP--TFAMFVMKTGLRLGLWA   54 (148)
T ss_dssp             CEEEEEEESCHHHHHHHHHHHHTCCCSEECS--SEEEEECTTSCEEEEEE
T ss_pred             ccEEEEEeCCHHHHHHHHHHHcCCEEeccCC--CEEEEEcCCCcEEEEec
Confidence            68999999999999888776 7888765432  23445545777777764

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=87.33  E-value=1.4  Score=28.04  Aligned_cols=57  Identities=16%  Similarity=0.191  Sum_probs=38.7

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCCCC
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPD   97 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~~~   97 (160)
                      +..|+.+.|.|++++.+..++ .|.++.........+ +..++.. +|..++|++....+
T Consensus        65 ~~~hl~f~V~d~d~~~~~l~~-~G~~v~~~p~~~~~G-~~~~~~DPdG~~iel~~~~~~~  122 (144)
T 3r6a_A           65 RNTQATFLVDSLDKFKTFLEE-NGAEIIRGPSKVPTG-RNMTVRHSDGSVIEYVEHSKIE  122 (144)
T ss_dssp             GGCCEEEEESCHHHHHHHHHH-TTCEEEEEEEEETTE-EEEEEECTTSCEEEEEEECC--
T ss_pred             cceEEEEEeCCHHHHHHHHHH-cCCEEecCCccCCCc-eEEEEECCCCCEEEEEEcCCcc
Confidence            358999999999999999876 899876432211222 3445554 57789999877543

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=86.89  E-value=3.4  Score=25.42  Aligned_cols=46  Identities=11%  Similarity=0.092  Sum_probs=31.6

Q ss_pred             ceEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEEcCCCCeEEEEe
Q 031406          109 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       109 ~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~ie~~~  157 (160)
                      +.|+.+.|.|++++.+...+ .|.++.......  .++. .+|..+++.+
T Consensus         5 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~--~~~~-~~~~~l~l~~   51 (135)
T 1nki_A            5 LNHLTLAVADLPASIAFYRDLLGFRLEARWDQG--AYLE-LGSLWLCLSR   51 (135)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEETTE--EEEE-ETTEEEEEEE
T ss_pred             EeEEEEEeCCHHHHHHHHHHhcCCEEEEcCCCc--eEEe-cCCEEEEEEe
Confidence            68999999999999998887 799887542221  2332 2344556554

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=86.84  E-value=2.1  Score=26.63  Aligned_cols=29  Identities=24%  Similarity=0.433  Sum_probs=24.5

Q ss_pred             eeeeeEEEEeC--CHHHHHHHHHHhcCCEEee
Q 031406           38 VSVHHVGILCE--NLERSLEFYQNILGLEINE   67 (160)
Q Consensus        38 ~~i~hv~l~v~--D~~~a~~Fy~~~lG~~~~~   67 (160)
                      .++.|+.+.|.  |++++.+...+ .|.++..
T Consensus        65 ~~~~h~~~~v~~~d~~~~~~~l~~-~G~~~~~   95 (139)
T 1r9c_A           65 RSYNHIAFKIDDADFDRYAERVGK-LGLDMRP   95 (139)
T ss_dssp             CCSCEEEEECCGGGHHHHHHHHHH-HTCCBCC
T ss_pred             CCeeEEEEEcCHHHHHHHHHHHHH-CCCcccC
Confidence            46789999999  99999999876 7887654

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=86.44  E-value=2.7  Score=25.11  Aligned_cols=51  Identities=8%  Similarity=0.132  Sum_probs=32.8

Q ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEe
Q 031406           41 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME   92 (160)
Q Consensus        41 ~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~   92 (160)
                      .|+.+.|.|++++.+-.++ .|.++.........+.+..++.. +|..+++++
T Consensus        65 ~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~  116 (118)
T 2i7r_A           65 IIIHIEVEDVDQNYKRLNE-LGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYR  116 (118)
T ss_dssp             EEEEEECSCHHHHHHHHHH-HTCCEEEEEEECTTSCEEEEEECGGGCEEEEEE
T ss_pred             EEEEEEECCHHHHHHHHHH-CCCceecCCccccCccEEEEEECCCccEEEEEe
Confidence            3799999999999999877 78876432221222334444444 455677665

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=86.13  E-value=3.3  Score=25.75  Aligned_cols=48  Identities=10%  Similarity=0.070  Sum_probs=33.2

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEEcCCCCeEEEEee
Q 031406          108 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       108 ~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      .+.|+++.|.|++++.+...+ .|.++.......  .++. .+|..+++.+.
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~--~~~~-~~~~~l~l~~~   52 (141)
T 1npb_A            4 SLNHLTLAVSDLQKSVTFWHELLGLTLHARWNTG--AYLT-CGDLWVCLSYD   52 (141)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTSCCEEEEEETTE--EEEE-ETTEEEEEEEC
T ss_pred             eEEEEEEEeCCHHHHHHHHHhccCCEEEeecCCc--EEEE-ECCEEEEEEEC
Confidence            368999999999999998876 799886543222  3333 24555666553

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=86.08  E-value=2.4  Score=27.24  Aligned_cols=58  Identities=9%  Similarity=0.111  Sum_probs=39.0

Q ss_pred             eeeeeeeEEEEe---CCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCC
Q 031406           36 GVVSVHHVGILC---ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN   95 (160)
Q Consensus        36 ~~~~i~hv~l~v---~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~   95 (160)
                      ...++.|+++.|   .|++++.+-.++ .|.++........ +.+..++.. +|..++|++...
T Consensus        73 ~~~g~~hi~f~V~~~~dld~~~~~l~~-~G~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  134 (160)
T 3r4q_A           73 GAVGQGHFCFYADDKAEVDEWKTRFEA-LEIPVEHYHRWPN-GSYSVYIRDPAGNSVEVGEGKL  134 (160)
T ss_dssp             EEEEECEEEEEESSHHHHHHHHHHHHT-TTCCCCEEEECTT-SCEEEEEECTTCCEEEEEEGGG
T ss_pred             CCcceeEEEEEeCCHHHHHHHHHHHHH-CCCEEeccccccC-CcEEEEEECCCCCEEEEEeCCC
Confidence            345789999999   888888888766 6888764322212 234455554 577899988653

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=85.84  E-value=4.2  Score=24.68  Aligned_cols=57  Identities=12%  Similarity=0.032  Sum_probs=36.6

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEE-------eeecCCCCCCcceEEEEe-CCcEEEEEecCC
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEI-------NEARPHDKLPYRGAWLWV-GAEMIHLMELPN   95 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~-------~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~   95 (160)
                      .+..|+.+.|.|++++.+..++ .|.+.       .........+.+..++.. +|..+++.+...
T Consensus        57 ~~~~~~~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  121 (126)
T 1ecs_A           57 ASWFSCCLRLDDLAEFYRQCKS-VGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNEL  121 (126)
T ss_dssp             GCCCEEEEEESCHHHHHHHHHH-TTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECCC
T ss_pred             CcceEEEEEECCHHHHHHHHHH-CCCccccccCccccCCcccCcccEEEEEECCCCCEEEEecchh
Confidence            3568999999999999999877 68873       221111122334455554 466788877543

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=84.72  E-value=4.4  Score=24.94  Aligned_cols=54  Identities=7%  Similarity=0.056  Sum_probs=35.8

Q ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCC
Q 031406           41 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN   95 (160)
Q Consensus        41 ~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~   95 (160)
                      .|+.+.|.|++++.+-.++ .|.++.........+.+..++.. +|..++|.+...
T Consensus        70 ~~~~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  124 (137)
T 3itw_A           70 KQVIVWVSDVDEHFMRSTA-AGADIVQPLQDKPWGLRQYLVRDLEGHLWEFTRHLR  124 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHH-TTCEEEEEEEEETTTEEEEEEECSSSCEEEEEECC-
T ss_pred             EEEEEEeCCHHHHHHHHHH-cCCeeccCccccCCCcEEEEEECCCCCEEEEEEEcC
Confidence            3999999999999998876 78886643222222333444544 466888887654

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=84.65  E-value=1.5  Score=27.27  Aligned_cols=55  Identities=7%  Similarity=-0.036  Sum_probs=35.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecC
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP   94 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~   94 (160)
                      .+..|+.+.|.|++++.+..++  |.++.........+.+..++.. +|..+++.+..
T Consensus        73 ~~~~~~~~~v~dv~~~~~~l~~--G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  128 (141)
T 2qnt_A           73 RRNMLLYFEHADVDAAFQDIAP--HVELIHPLERQAWGQRVFRFYDPDGHAIEVGESL  128 (141)
T ss_dssp             CSSCEEEEEESCHHHHHC-CGG--GSCEEEEEEECTTSCEEEEEECTTCCEEEEEECC
T ss_pred             CCceEEEEEeCcHHHHHHHHHc--CCccccCCccCCCCCEEEEEECCCCCEEEEEecc
Confidence            3578999999999999988877  8876532211122334455554 46678887754

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=84.32  E-value=4.6  Score=25.33  Aligned_cols=30  Identities=13%  Similarity=0.283  Sum_probs=24.8

Q ss_pred             CCceEEEEEeCCHHHHHHHHHHCCCeEecc
Q 031406          107 GRDRHTCIAIRDVSKLKMILDKAGISYTLS  136 (160)
Q Consensus       107 ~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~  136 (160)
                      ..+.||.+.|.|+++..+...+.|......
T Consensus         8 ~rl~~V~L~V~Dl~~s~~FY~~lg~~~~~~   37 (149)
T 4gym_A            8 SRLTFVNLPVADVAASQAFFGTLGFEFNPK   37 (149)
T ss_dssp             CCCEEEEEEESCHHHHHHHHHHTTCEECGG
T ss_pred             ccEEEEEEEeCCHHHHHHHHHHhCCCccee
Confidence            347899999999999998888888776544

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=83.83  E-value=4.1  Score=24.94  Aligned_cols=30  Identities=17%  Similarity=0.114  Sum_probs=25.1

Q ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCeEecc
Q 031406          107 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS  136 (160)
Q Consensus       107 ~~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~  136 (160)
                      ..+.|+++.|.|++++.+...+ .|.++...
T Consensus         8 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~   38 (135)
T 3rri_A            8 NDVFHLAIPARDLDEAYDFYVTKLGCKLARR   38 (135)
T ss_dssp             TSEEEEEEEESCHHHHHHHHTTTTCCEEEEE
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEeecc
Confidence            3479999999999999998866 79988544

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=83.20  E-value=5.8  Score=24.09  Aligned_cols=56  Identities=16%  Similarity=0.290  Sum_probs=37.4

Q ss_pred             eeeeeEEEEeC--CHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecC
Q 031406           38 VSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP   94 (160)
Q Consensus        38 ~~i~hv~l~v~--D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~   94 (160)
                      .++.|+.+.|.  |++++.+...+ .|.++...........+..++.. +|..+++.+..
T Consensus        65 ~~~~h~~~~v~~~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           65 RTYNHIAFQIQSEEVDEYTERIKA-LGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             CCSCEEEEECCGGGHHHHHHHHHH-HTCCEECCCCCCTTCCCEEEEECSSSCEEEEECSS
T ss_pred             CCeeEEEEEcCHHHHHHHHHHHHH-CCCcccCCCccCCCCeeEEEEECCCCCEEEEEcCC
Confidence            46789999995  99999998876 78887653221112224455554 46688887754

>3iuz_A Putative glyoxalase superfamily protein; struct genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: MLY P6G PGE; 1.90A {Ralstonia eutropha}

Probab=82.50  E-value=4.7  Score=29.95  Aligned_cols=47  Identities=15%  Similarity=-0.012  Sum_probs=36.5

Q ss_pred             CCCCceEEEEEeCCHHHHHHHHHHCCCeEecc----CC----------CceEEEEEcCCCC
Q 031406          105 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KS----------GRPAIFTRDPDAN  151 (160)
Q Consensus       105 ~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~----~~----------g~~~~~~~DPdG~  151 (160)
                      .|...+|+...|.||+++.+.++++|+.+...    ++          ....+.|.|.+|.
T Consensus       232 ~G~~iNHlT~rv~DId~v~~~m~~~G~~~k~~IeGsP~~lLrQTSf~A~~e~v~F~d~~G~  292 (340)
T 3iuz_A          232 EGNAFNHATDRVDDVFGLSEQQXALGRPMXDXVEVSGSGRVXQTAFRADTVRRQFIGAQGE  292 (340)
T ss_dssp             HTTSCSEEEEECSCHHHHHHHHHHTTCCBCSCCEECTTSSEEEEEBCCCEEEEEEECTTSC
T ss_pred             cCCccccccCCcCCHHHHHHHHHHcCCChhhhhcCCcccceeeeeccccceEEEEecCCCc
Confidence            35567999999999999999999999988542    22          2345788888874

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=81.89  E-value=6.2  Score=24.27  Aligned_cols=59  Identities=7%  Similarity=-0.052  Sum_probs=36.1

Q ss_pred             eeeEEEEeCCHHHHHHHHHH---hcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCCCCC
Q 031406           40 VHHVGILCENLERSLEFYQN---ILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDP   98 (160)
Q Consensus        40 i~hv~l~v~D~~~a~~Fy~~---~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~~~~   98 (160)
                      -.|+.+.|.|++++.+..++   .+|.++.........+.+..++.. +|..++|.+......
T Consensus        67 ~~~l~~~v~dv~~~~~~l~~~g~~~g~~i~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~~~~  129 (134)
T 3fcd_A           67 RVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFTAPLAEGH  129 (134)
T ss_dssp             -EEEEEECSCHHHHHHHHHHHHTTSCGGGEEEEEECTTSEEEEEEECTTSCEEEEEEECCTTS
T ss_pred             eEEEEEEeCCHHHHHHHHHhcCCccCCccccCCcccCCCcEEEEEECCCCCEEEEEEcccccc
Confidence            36899999999999988874   244433322111223334455554 567889988876543

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=81.86  E-value=11  Score=26.42  Aligned_cols=82  Identities=20%  Similarity=0.184  Sum_probs=48.3

Q ss_pred             eeeeEEEEe-CCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCC--cEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 031406           39 SVHHVGILC-ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIA  115 (160)
Q Consensus        39 ~i~hv~l~v-~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~--~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  115 (160)
                      ++..+.+.| .+-.+|.+||++ +||+..........       ..|.  ..+.+...+-....      .....++.+.
T Consensus       125 g~~~i~~~v~~~N~~s~~ly~k-~GF~~~g~~~~~~~-------~~g~d~~~~~l~~~~~~~~~------~~~~~~~~l~  190 (301)
T 2zw5_A          125 GLDRVEAWIEAGNRRSLAVAAR-VGLTERARLAQHYP-------HRPGPHEMVVLGKARAEEPL------TTLAVITELP  190 (301)
T ss_dssp             CCSEEEEEEESSCHHHHHHHHH-TTCEEEEEEEECCT-------TSSSCEEEEEEEEESSCCSC------EEEEEEEEEE
T ss_pred             CccEEEEEeCCCCHHHHHHHHH-cCCcCcceehhhcc-------cCCCCeEEEEEeHHHhhhhc------ccceeEEEEE
Confidence            567777777 566789999987 99998764221110       0011  11222222211110      1123578888


Q ss_pred             eCCHHHHHHHH-HHCCCeEe
Q 031406          116 IRDVSKLKMIL-DKAGISYT  134 (160)
Q Consensus       116 v~d~~~~~~~l-~~~G~~~~  134 (160)
                      |.|++++.+.. ...|.++.
T Consensus       191 v~D~~~a~~FY~~~lG~~~~  210 (301)
T 2zw5_A          191 VRDVAATLRLVEAALGARTA  210 (301)
T ss_dssp             ESCHHHHHHHHHHHSCCEEE
T ss_pred             eCCHHHHHHHHHHhcCCeEe
Confidence            99999998877 44799876

>2g3a_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 1.90A {Agrobacterium tumefaciens str} SCOP: d.108.1.1

Probab=81.20  E-value=4.9  Score=24.93  Aligned_cols=30  Identities=17%  Similarity=0.086  Sum_probs=23.2

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecC
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARP   70 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~   70 (160)
                      ++..+.+.+.| ..+.+||++ +||+......
T Consensus       108 g~~~i~l~~~n-~~a~~~y~k-~GF~~~~~~~  137 (152)
T 2g3a_A          108 GCMGAYIDTMN-PDALRTYER-YGFTKIGSLG  137 (152)
T ss_dssp             TCCEEEEEESC-HHHHHHHHH-HTCEEEEEEC
T ss_pred             CCCEEEEEecC-ccHHHHHHH-CCCEEeeecc
Confidence            45677788875 679999987 9999887544

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=80.79  E-value=4.3  Score=25.70  Aligned_cols=51  Identities=24%  Similarity=0.288  Sum_probs=34.6

Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeec-CCCCCCcceEEEEe-CCcEEEEEecC
Q 031406           42 HVGILCENLERSLEFYQNILGLEINEAR-PHDKLPYRGAWLWV-GAEMIHLMELP   94 (160)
Q Consensus        42 hv~l~v~D~~~a~~Fy~~~lG~~~~~~~-~~~~~~~~~~~~~~-g~~~~~l~~~~   94 (160)
                      |+.+.|.|++++.+..++ .|.++.... ..+..+ +..++.. +|..++|++..
T Consensus        93 ~l~f~v~dld~~~~~l~~-~G~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           93 VVTVDVESIESALERIES-LGGKTVTGRTPVGNMG-FAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             EEEEECSCHHHHHHHHHH-TTCEEEEEEEEETTTE-EEEEEECTTSCEEEEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHH-cCCeEecCCeecCCCE-EEEEEECCCCCEEEEEecC
Confidence            899999999999999987 899876432 111122 3444444 46678887754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	160
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	3e-14
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	6e-14
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	3e-12
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	9e-12
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	6e-11
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	3e-10
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	3e-10
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	3e-10
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	2e-09
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	2e-09
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	2e-09
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	1e-08
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	2e-08
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	1e-07
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	2e-07
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	2e-07
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	2e-07
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	3e-07
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	5e-07
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	7e-07
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	1e-06
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	4e-06
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	5e-06
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	2e-05
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	3e-05
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	3e-05
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	3e-05
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	4e-05
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	7e-05
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	8e-04

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 63.9 bits (154), Expect = 3e-14
 Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 7/133 (5%)

Query: 35  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV---GAEMIHLM 91
           Y +   HH+ ++ +N   +  FY+N+LGL   +   +   P      +    G+    L 
Sbjct: 2   YEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELS 61

Query: 92  ELPNPDPLSGRPEHGGRDR--HTCIAIRDVSKLKMILDKAGISYT--LSKSGRPAIFTRD 147
               P             R      +   +   K   +K  + ++   + + RPA+   D
Sbjct: 62  FFEIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFED 121

Query: 148 PDANALEFTQVDG 160
            +   L     +G
Sbjct: 122 AEGLRLVLLVSNG 134

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 62.8 bits (151), Expect = 6e-14
 Identities = 26/118 (22%), Positives = 44/118 (37%)

Query: 40  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 99
           + H  I   +L+RS++FY   LG+++       +  Y   +L  G EM   +     +  
Sbjct: 4   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 63

Query: 100 SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ 157
               +H     H  I + DV +L   + K  +            F  DPD   +E   
Sbjct: 64  VTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLN 121

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 58.5 bits (140), Expect = 3e-12
 Identities = 22/122 (18%), Positives = 49/122 (40%), Gaps = 5/122 (4%)

Query: 41  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 100
            H  +   +L+RS++FY  +LG+++     + +  Y  A++  G E    +     +   
Sbjct: 4   LHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV 63

Query: 101 GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDANALEF 155
            + E G    H  +++ + ++    + + G + T              F  DPD   +E 
Sbjct: 64  DKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIEL 123

Query: 156 TQ 157
            +
Sbjct: 124 IE 125

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 56.9 bits (136), Expect = 9e-12
 Identities = 16/122 (13%), Positives = 34/122 (27%), Gaps = 11/122 (9%)

Query: 39  SVHHVGILCENLERSLEFYQNILGLEINEARPH-DKLPYRGAWLWVGAEMIHLMELPNPD 97
            + H+  +  +LER     + +       A         R  +  +G   + +M+     
Sbjct: 4   GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLA 63

Query: 98  PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANAL 153
                           I   D  +    + K G+     +        +I+  D D +  
Sbjct: 64  E------RSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMF 117

Query: 154 EF 155
           E 
Sbjct: 118 EL 119

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 54.9 bits (131), Expect = 6e-11
 Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 11/118 (9%)

Query: 39  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 98
            ++H+ +   +L  S+ FY+++LG  +           +GA+L +G+  + L   P    
Sbjct: 4   GLNHLTLAVADLPASIAFYRDLLGFRLEAR------WDQGAYLELGSLWLCLSREPQYGG 57

Query: 99  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANALEF 155
               P          IA  D ++    L   G+     ++S   + +  DPD + LE 
Sbjct: 58  ----PAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEA 111

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 53.8 bits (128), Expect = 3e-10
 Identities = 13/120 (10%), Positives = 32/120 (26%)

Query: 36  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 95
             V   H  +  + L  + + +  +LG  + E    +       +L +  +   +  + +
Sbjct: 2   AAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHH 61

Query: 96  PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEF 155
           P+           +    +                       +    I+  DP  N  E 
Sbjct: 62  PEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEV 121

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (128), Expect = 3e-10
 Identities = 21/144 (14%), Positives = 46/144 (31%), Gaps = 27/144 (18%)

Query: 41  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-------------- 86
               +  ++ ++SL+FY  +LG+ + +      + +   +L    +              
Sbjct: 25  QQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWA 84

Query: 87  -----MIHLMELPNPDPLSGRPEHGGRD-----RHTCIAIRDVSKLKMILDKAGISYT-- 134
                 + L      +    +  H G        H  IA+ DV       ++ G+ +   
Sbjct: 85  LSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKK 144

Query: 135 -LSKSGRPAIFTRDPDANALEFTQ 157
                 +   F +DPD   +E   
Sbjct: 145 PDDGKMKGLAFIQDPDGYWIEILN 168

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 53.1 bits (126), Expect = 3e-10
 Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 8/118 (6%)

Query: 39  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 98
           S++H+ +   +L++S+ F+  +LGL ++           G      +       +P    
Sbjct: 4   SLNHLTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLTCGDLWVCLSYDEARQYVP---- 59

Query: 99  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEF 155
                E         +A  D   L   L++AG++     KS   + +  DPD + LE 
Sbjct: 60  ---PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLEL 114

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 51.7 bits (123), Expect = 2e-09
 Identities = 12/127 (9%), Positives = 31/127 (24%), Gaps = 9/127 (7%)

Query: 34  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 93
            + +  +  V +    L++       I G          +      +  +  E    + +
Sbjct: 7   KHQIQGMGSVELTVRRLDKMASTLTEIFGY-----TEVSRNDQEAIFQSIKGEAFGEIVV 61

Query: 94  PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS----GRPAIFTRDPD 149
              D  + +P  G           D              +  S         +++ R+ +
Sbjct: 62  KYLDGPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESN 121

Query: 150 ANALEFT 156
               E  
Sbjct: 122 GILFEIA 128

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 51.8 bits (123), Expect = 2e-09
 Identities = 19/120 (15%), Positives = 37/120 (30%), Gaps = 2/120 (1%)

Query: 37  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 96
           +V + H   +  ++ R   + +  LG  ++E           AW+     +         
Sbjct: 3   LVRLDHFNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN 61

Query: 97  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR-PAIFTRDPDANALEF 155
            P          ++H  I I D      I D+               ++  DPD + +E 
Sbjct: 62  GPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEI 121

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 50.4 bits (119), Expect = 2e-09
 Identities = 12/116 (10%), Positives = 28/116 (24%), Gaps = 9/116 (7%)

Query: 45  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 104
           +   ++  ++EF+ + LG                A +      + +  + +         
Sbjct: 10  LTARDVAEAVEFWTDRLGFSRVFVEDDF------AGVVRDDVTLFISAVQDQVVPDNTQA 63

Query: 105 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP---AIFTRDPDANALEFTQ 157
                    +       +      A          +P       RDP  N + F  
Sbjct: 64  WVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA 119

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 48.6 bits (114), Expect = 1e-08
 Identities = 15/118 (12%), Positives = 32/118 (27%), Gaps = 10/118 (8%)

Query: 40  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 99
           + H+ +   ++  + EF +   GL  +  R +     R    ++   M            
Sbjct: 4   IKHLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVMRDNDGFILTLMKGKEV------- 56

Query: 100 SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-AIFTRDPDANALEFT 156
             +            +   V K+   L + G      K       +   P    +E  
Sbjct: 57  --QYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVM 112

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 47.5 bits (112), Expect = 2e-08
 Identities = 17/124 (13%), Positives = 43/124 (34%), Gaps = 15/124 (12%)

Query: 39  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 98
           +++ + I+  N+ +     ++IL  + + A           +      ++       P  
Sbjct: 2   NLNQLDIIVSNVPQVCADLEHILDKKADYANDG-----FAQFTIGSHCLMLSQNHLVP-- 54

Query: 99  LSGRPEHGGRDRHTCIAIRDV----SKLKMILDKAGISYTLSKSGRPAIFTRDPDANALE 154
                E+        I + DV     +L  +  K     T++  G  ++  + P    L+
Sbjct: 55  ----LENFQSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLD 110

Query: 155 FTQV 158
           F ++
Sbjct: 111 FYRM 114

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 46.0 bits (108), Expect = 1e-07
 Identities = 17/125 (13%), Positives = 30/125 (24%), Gaps = 9/125 (7%)

Query: 42  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 101
            +      L+  + FY+  L L+                +  G                 
Sbjct: 12  RIARPTGQLDEIIRFYEEGLCLKRIG---EFSQHNGYDGVMFGLPHADYHLEFTQYEGGS 68

Query: 102 RPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYTLSKS---GRPAIFTRDPDANALEF 155
                  D      + +  +L  I   L   G     S++       +   DPD   + F
Sbjct: 69  TAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVF 128

Query: 156 TQVDG 160
               G
Sbjct: 129 MNSKG 133

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 45.8 bits (107), Expect = 2e-07
 Identities = 19/138 (13%), Positives = 39/138 (28%), Gaps = 17/138 (12%)

Query: 37  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE---------- 86
            + + HV   C + + + ++YQ   G        + +       +   A+          
Sbjct: 5   FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQV 64

Query: 87  MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT-----LSKSGRP 141
           M  L +         +        H    + D+  +   L + G+        L   G  
Sbjct: 65  MAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR 124

Query: 142 AIF--TRDPDANALEFTQ 157
             F   +      +E TQ
Sbjct: 125 INFMHPKSGKGVLIELTQ 142

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 45.5 bits (106), Expect = 2e-07
 Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 7/124 (5%)

Query: 40  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 99
           +    ++ E++ +S+EFY+  +G+EI                 +      +  + + DP 
Sbjct: 3   ISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPE 61

Query: 100 SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK------SGRPAIFTRDPDANAL 153
              P  G R           S  K   +     Y           G+     +DPD N +
Sbjct: 62  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVV 121

Query: 154 EFTQ 157
           +   
Sbjct: 122 DLFA 125

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 45.4 bits (106), Expect = 2e-07
 Identities = 15/140 (10%), Positives = 40/140 (28%), Gaps = 19/140 (13%)

Query: 37  VVSVHHVGILCENLERSLEFYQNILGLEINEARPH---------------DKLPYRGAWL 81
           ++ + +V I+ E+L+ ++ F++ I       A                  +         
Sbjct: 7   LLRMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG 66

Query: 82  WVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY----TLSK 137
               E+   +  P        P +          + D+ ++   L K G          +
Sbjct: 67  HSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYE 126

Query: 138 SGRPAIFTRDPDANALEFTQ 157
           +     + R  +   +   +
Sbjct: 127 NSYRLCYIRGVEGILIGLAE 146

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 45.0 bits (105), Expect = 3e-07
 Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 14/125 (11%)

Query: 36  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 95
           GV+   HV +   ++ ++LE Y  +LGL        D+      +L    E+     +  
Sbjct: 4   GVMRPGHVQLRVLDMSKALEHYVELLGLI-----EMDRDDQGRVYLKAWTEVDKFSLVLR 58

Query: 96  PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDA 150
                G    G +        +    L       G +     +G        +  + P  
Sbjct: 59  EADEPGMDFMGFKVVDEDALRQLERDLM----AYGCAVEQLPAGELNSCGRRVRFQAPSG 114

Query: 151 NALEF 155
           +  E 
Sbjct: 115 HHFEL 119

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (104), Expect = 5e-07
 Identities = 14/101 (13%), Positives = 30/101 (29%), Gaps = 5/101 (4%)

Query: 36  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 95
             +  H V     N +++  FY N +G E    +  +          +    I  +    
Sbjct: 8   RFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSA 67

Query: 96  PDPLSG-----RPEHGGRDRHTCIAIRDVSKLKMILDKAGI 131
            +P +        +HG   +     + D   +     + G 
Sbjct: 68  LNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGA 108

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 43.8 bits (102), Expect = 7e-07
 Identities = 18/126 (14%), Positives = 36/126 (28%), Gaps = 19/126 (15%)

Query: 37  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 96
           + S+ ++G    ++     F    LGL       +      G    + +    +      
Sbjct: 2   IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN------GDLFRIDSRAWRIAVQQGE 55

Query: 97  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-------AIFTRDPD 149
                     G   +       ++++   L +AGI+ T   +           I   DP 
Sbjct: 56  VD---DLAFAG---YEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPF 109

Query: 150 ANALEF 155
              LE 
Sbjct: 110 GLPLEI 115

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 43.5 bits (101), Expect = 1e-06
 Identities = 19/124 (15%), Positives = 39/124 (31%), Gaps = 15/124 (12%)

Query: 37  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 96
           +V   ++ I+  +L +S EFY ++LGL + E   +               ++    +   
Sbjct: 14  IVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDENTIYLRSLEEFIHHNLVLRQGPIAAV 73

Query: 97  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDAN 151
                         +   +  +V   +    + G      K G       ++   DP   
Sbjct: 74  ----------AAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGF 123

Query: 152 ALEF 155
             EF
Sbjct: 124 PYEF 127

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 42.8 bits (100), Expect = 4e-06
 Identities = 14/111 (12%), Positives = 29/111 (26%), Gaps = 13/111 (11%)

Query: 34  DYGVVSVHHVGILCENLERSLEFYQNILGLEI-------NEARPHDKLPYRGAWLWVGAE 86
           DYG+    H+      L  +  ++    G          +       L            
Sbjct: 4   DYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENV 63

Query: 87  MIHLMELPNPDPLSGRPE------HGGRDRHTCIAIRDVSKLKMILDKAGI 131
           ++ L E  +      + +       G   +H  +A  DV +    +     
Sbjct: 64  LLPLNEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSA 114

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 41.7 bits (97), Expect = 5e-06
 Identities = 13/105 (12%), Positives = 28/105 (26%), Gaps = 8/105 (7%)

Query: 35  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP 94
           + V  +  V     N +++  +Y    G+++      +      A   +       +   
Sbjct: 3   FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTS 62

Query: 95  NPDPLSGRP--------EHGGRDRHTCIAIRDVSKLKMILDKAGI 131
              P +           EHG       I + D         + G 
Sbjct: 63  VIKPATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGA 107

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 40.1 bits (93), Expect = 2e-05
 Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 11/124 (8%)

Query: 40  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 99
           + H      +  +++ FY  +LG  +++       P            +H     +   L
Sbjct: 11  IGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAH----FLHCNGRHHTIAL 66

Query: 100 SGRPEHGGRDRHT--CIAIRDVSKLKMILDKAGI-SYTLSKSGRP---AIFTRDPDAN-A 152
           +  P              I DV      LD AG  +  L +       + +   P     
Sbjct: 67  AAFPIPKRIHHFMLQANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYADTPSPMIE 126

Query: 153 LEFT 156
           +EF 
Sbjct: 127 VEFG 130

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 39.6 bits (91), Expect = 3e-05
 Identities = 17/129 (13%), Positives = 37/129 (28%), Gaps = 25/129 (19%)

Query: 37  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 96
           +  + ++G   +++     F    +GL               A          +   P  
Sbjct: 2   IERLGYLGFAVKDVPAWDHFLTKSVGLM------AAGSAGDAALYRADQRAWRIAVQPGE 55

Query: 97  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDK---AGISYTLSKSGRP-------AIFTR 146
                         +  + + D + L+ + DK   AG+++T               +  +
Sbjct: 56  LD---------DLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQ 106

Query: 147 DPDANALEF 155
           DP    LE 
Sbjct: 107 DPFGLPLEI 115

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 39.2 bits (90), Expect = 3e-05
 Identities = 17/118 (14%), Positives = 29/118 (24%), Gaps = 16/118 (13%)

Query: 42  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 101
              I      R+  FY +ILG+                      E    +          
Sbjct: 5   VANIATPEPARAQAFYGDILGMP------VAMDHGWIVTHASPLEAHAQVSFAREGG--- 55

Query: 102 RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEF 155
               G       I + +  ++   + KAG+               +F RDP    +  
Sbjct: 56  ---SGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINI 110

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 39.8 bits (92), Expect = 3e-05
 Identities = 8/57 (14%), Positives = 20/57 (35%)

Query: 35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLM 91
          +  ++ HHV + C +   +   +   LG  +             A L + +  +  +
Sbjct: 9  FHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFL 65

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 38.9 bits (89), Expect = 4e-05
 Identities = 12/115 (10%), Positives = 27/115 (23%), Gaps = 9/115 (7%)

Query: 45  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 104
           +   ++  ++ F+ + LG E +              +  G   +H+    +         
Sbjct: 11  LTAVDVPANVSFWVDTLGFEKDFGDRDFA------GVRRGDIRLHISRTEHQIVADNTSA 64

Query: 105 HGGRDRHTCIAIRDVSKLKMILDKAGISYTL---SKSGRPAIFTRDPDANALEFT 156
                    +       +                          RDP  N + FT
Sbjct: 65  WIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFT 119

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 38.0 bits (87), Expect = 7e-05
 Identities = 15/115 (13%), Positives = 24/115 (20%), Gaps = 3/115 (2%)

Query: 45  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 104
           +   + + +  FY+  LG  I                 +     H    P     S    
Sbjct: 8   LPSRDFDSTAAFYER-LGFGI--VFRDAGWMILQRGDLMLEFFAHPGLDPLASWFSCCLR 64

Query: 105 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD 159
                           +          +  L   G       DPD   L   Q +
Sbjct: 65  LDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE 119

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 35.6 bits (81), Expect = 8e-04
 Identities = 9/62 (14%), Positives = 20/62 (32%), Gaps = 1/62 (1%)

Query: 35 YGVVSVHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAEMIHLMEL 93
          + V   HH+   C +       +   LG+    ++          ++L    ++  L   
Sbjct: 8  FKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTA 67

Query: 94 PN 95
          P 
Sbjct: 68 PY 69

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	160
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.9
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.9
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.89
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.89
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.89
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.88
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.88
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.88
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.87
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.87
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.86
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.86
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.86
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.86
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.84
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.84
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.84
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.83
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.81
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.81
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.8
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.8
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.79
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.79
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.78
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.78
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.76
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.75
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.74
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.72
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.61
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.39
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.35
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.34
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.3
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.21
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	99.13
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.11
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.77
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	97.79
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	96.03
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	95.86
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	95.62
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	95.2
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	94.27
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	93.42
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	92.63
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	92.45
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	91.77
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	91.61
d2g3aa1	137	Probable acetyltransferase Atu2258 {Agrobacterium	90.58
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	90.42
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	90.03
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	89.81
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	87.72
d1y9wa1	140	Probable acetyltransferase BC2806 {Bacillus cereus	86.6
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	86.27
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	86.15
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	83.12
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	82.64
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	82.49
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	81.84
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	81.53

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.90  E-value=3.1e-23  Score=131.75  Aligned_cols=110  Identities=16%  Similarity=0.198  Sum_probs=88.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeC
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  117 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~  117 (160)
                      ++|+|+.|.|+|+++|.+||+++||++.....+      ..+++..|+..+.+.........    .. +...+++|.|+
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~------~~~~~~~g~~~l~l~~~~~~~~~----~~-~~~~~~~f~v~   69 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGSHCLMLSQNHLVPLE----NF-QSGIIIHIEVE   69 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETTEEEEEESSCSSSCC----CC-CSCEEEEEECS
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC------CeEEEEEcCceeeeeecccCCCC----CC-CcceEEEEEEC
Confidence            378999999999999999999999999876433      23678889888888765432211    11 22368999999


Q ss_pred             CHHHHHHHHHHCCCeEecc----CCCceEEEEEcCCCCeEEEEee
Q 031406          118 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       118 d~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      |+++++++|+++|+++..+    ++|.+.++|+|||||.|||.|.
T Consensus        70 D~d~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          70 DVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEEC
T ss_pred             CHHHHHHHHHhhccccccceEEeeCCeEEEEEECCCCCEEEEEEe
Confidence            9999999999999998764    3577899999999999999986

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.90  E-value=8.5e-23  Score=132.05  Aligned_cols=116  Identities=15%  Similarity=0.233  Sum_probs=90.3

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCC-CCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~-~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      |+.+|+||+|.|+|++++++||+++|||++........ ......++..++..+.+........        ....|++|
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~f   72 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLAE--------RSYNHIAF   72 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCCSS--------CCSCEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCCEEEeecccccccc--------cceeeeee
Confidence            57799999999999999999999999999987654332 2344577777887777766543221        22578999


Q ss_pred             EeC--CHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEeeC
Q 031406          115 AIR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       115 ~v~--d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      .++  |+++++++|+++|+++..++    ++++.+||+|||||+|||.+.+
T Consensus        73 ~v~~~dv~~~~~~l~~~gv~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          73 KIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECCC
T ss_pred             cccHHHHHHHHHHHHHCCCeEecCCcccCCCEEEEEEECCCCCEEEEEECC
Confidence            775  89999999999999986542    4578999999999999998753

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.89  E-value=4.6e-22  Score=131.10  Aligned_cols=123  Identities=14%  Similarity=0.220  Sum_probs=90.6

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCC-----------CCCCcceEEEEeC--CcEEEEEecCCCCCC---
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPH-----------DKLPYRGAWLWVG--AEMIHLMELPNPDPL---   99 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~-----------~~~~~~~~~~~~g--~~~~~l~~~~~~~~~---   99 (160)
                      .+++|+|++|.|+|+++|.+||++ |||++......           ........++...  ...+++++.......   
T Consensus         6 ~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~   84 (149)
T d1ss4a_           6 KLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADH   84 (149)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBC
T ss_pred             CCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCcccc
Confidence            467999999999999999999998 99998764321           1222234555553  347777665432221   


Q ss_pred             CCCCCCCCCceEEEEEeCCHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEeeC
Q 031406          100 SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       100 ~~~~~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      ...+....+..|++|.|+|+++++++|+++|+++..++    ++.+.+|++|||||.|||+|.=
T Consensus        85 ~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~e~~  148 (149)
T d1ss4a_          85 RTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEEL  148 (149)
T ss_dssp             TTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEEC
T ss_pred             cccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCCeEEEEEECCCCCEEEEEEcc
Confidence            11222334578999999999999999999999996543    4567899999999999999863

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.89  E-value=1.7e-22  Score=132.84  Aligned_cols=124  Identities=17%  Similarity=0.239  Sum_probs=87.6

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCC-cceEEEEeC----CcEEEEEecCCCCCCCCCCCCCCC
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVG----AEMIHLMELPNPDPLSGRPEHGGR  108 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~-~~~~~~~~g----~~~~~l~~~~~~~~~~~~~~~~~~  108 (160)
                      |..+.+|+||+|.|+|+++|++||+++|||++.......... ....++..+    ...+.+.........  .+ ..++
T Consensus         1 m~~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~-~~~~   77 (144)
T d1zswa1           1 MYEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRT--YR-GTNA   77 (144)
T ss_dssp             SSCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBC--BC-CBSE
T ss_pred             CCcccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCC--cc-CCCc
Confidence            346789999999999999999999999999988654422211 111222221    224444444332221  11 1234


Q ss_pred             ceEEEEEeCC---HHHHHHHHHHCCCeEecc--CCCceEEEEEcCCCCeEEEEeeCC
Q 031406          109 DRHTCIAIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVDG  160 (160)
Q Consensus       109 ~~hi~f~v~d---~~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdG~~ie~~~~~~  160 (160)
                      +.|+||.|+|   ++++.++|+++|+.+...  ..+.+.+||+|||||.|||++.++
T Consensus        78 ~~Hiaf~v~~~~~l~~~~~~l~~~gv~~~~~~~~~~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          78 ITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECTT
T ss_pred             eeEEEEecCCchhHHHHhhhhhccceeeeCccccCCeEEEEEECCCCCEEEEEEeCC
Confidence            7899999997   677889999999988654  357889999999999999998753

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.89  E-value=1.2e-21  Score=127.35  Aligned_cols=111  Identities=22%  Similarity=0.359  Sum_probs=88.1

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  115 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  115 (160)
                      |+.+|+||+|.|+|++++++||+++||+++....+      ...++..++..++...........      ....|++|.
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~h~~~~   68 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQYGGPA------ADYTHYAFG   68 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEEETTEEEEEEECTTCCCCC------SSSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEecc------ceeeeecCCeEEEEeeeccccccc------cccccchhc
Confidence            57899999999999999999999999999887654      346778888777776655433221      224566666


Q ss_pred             e--CCHHHHHHHHHHCCCeEeccC-CCceEEEEEcCCCCeEEEEee
Q 031406          116 I--RDVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       116 v--~d~~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +  +|+++++++|+++|+++...+ ++++.+||+|||||.|||...
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          69 IAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCSSSCEEEEECTTCCEEEEESC
T ss_pred             cccchHHHHHHHHHHCCCcCccCCCcceeEEEEECCCCCEEEEEEC
Confidence            5  599999999999999997654 457889999999999999764

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.88  E-value=9.1e-22  Score=128.76  Aligned_cols=114  Identities=24%  Similarity=0.389  Sum_probs=89.5

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  115 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  115 (160)
                      |+.+|+||+|.|+|++++++||+++|||++.....      ...++..++....+.........   +.......|++|.
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~h~~~~   71 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEARQYV---PPQESDYTHYAFT   71 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEETTEEEEEEECTTCCCC---CGGGSCSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec------cccccccccccceeecccccccC---CCcCCccceeeee
Confidence            57899999999999999999999999999876543      33667777776666655433221   1122345788888


Q ss_pred             e--CCHHHHHHHHHHCCCeEecc-CCCceEEEEEcCCCCeEEEEee
Q 031406          116 I--RDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       116 v--~d~~~~~~~l~~~G~~~~~~-~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +  +|+++++++|+++|+++... ..+++.+||+|||||.|||.+.
T Consensus        72 ~~~~d~~~~~~~l~~~Gv~~~~~~~~~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          72 VAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCCSSSEEEEEECTTCCEEEEEEC
T ss_pred             chHHHHHHHHHHHHHCCCeEeecCCCCceEEEEECCCCCEEEEEEC
Confidence            8  48999999999999998764 4568899999999999999764

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=1.8e-22  Score=130.46  Aligned_cols=118  Identities=21%  Similarity=0.343  Sum_probs=84.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCc----EEEEEecCCCCCCCCCCCCCCCceEEE
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTC  113 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~----~~~l~~~~~~~~~~~~~~~~~~~~hi~  113 (160)
                      ++|.|++|.|+|+++|++||+++|||++..............++.....    ...........    ....+....|++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~   76 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVD----KYELGTAYGHIA   76 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCC----CCCCCSSEEEEE
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccc----cccccccceeec
Confidence            3789999999999999999999999998876554444333343333211    11111111111    112234568999


Q ss_pred             EEeCCHHHHHHHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEeeC
Q 031406          114 IAIRDVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       114 f~v~d~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      +.+++++++.++++++|+.+...+     .+.+.+|++|||||.|||+|.+
T Consensus        77 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~  127 (135)
T d1f9za_          77 LSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  127 (135)
T ss_dssp             EECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-
T ss_pred             cchHHHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECC
Confidence            999999999999999999886542     3567889999999999999975

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.88  E-value=1.3e-22  Score=133.08  Aligned_cols=124  Identities=14%  Similarity=0.235  Sum_probs=92.6

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEE------eCCcEEEEEecCCCCCCCC----CCCC
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW------VGAEMIHLMELPNPDPLSG----RPEH  105 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~------~g~~~~~l~~~~~~~~~~~----~~~~  105 (160)
                      |+.+|+||+|.|+|+++|++||+++||++.......+..+....+..      .+...+++++.........    ....
T Consensus         4 m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~   83 (145)
T d1jc4a_           4 LFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNG   83 (145)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTT
T ss_pred             cceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccCC
Confidence            57899999999999999999999999999876554444443333332      3566889988765443211    1123


Q ss_pred             CCCceEEEEEeCCHHHHHHHHHHCCCeEeccC-----CCceEEEE--EcCCCCeEEEEeeC
Q 031406          106 GGRDRHTCIAIRDVSKLKMILDKAGISYTLSK-----SGRPAIFT--RDPDANALEFTQVD  159 (160)
Q Consensus       106 ~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~-----~g~~~~~~--~DPdG~~ie~~~~~  159 (160)
                      ..++.|+||.|+|+++++++|+++|+++...+     .|.+.+|+  +||+|++|||+|+|
T Consensus        84 ~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          84 RAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            45689999999999999999999999985432     33444445  68999999999986

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.87  E-value=1.9e-22  Score=136.45  Aligned_cols=117  Identities=13%  Similarity=0.201  Sum_probs=84.2

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCc---EEEEEecCCCCCCCCCCCCCCCc
Q 031406           33 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE---MIHLMELPNPDPLSGRPEHGGRD  109 (160)
Q Consensus        33 ~~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~---~~~l~~~~~~~~~~~~~~~~~~~  109 (160)
                      ...++.+|+||+|.|+|++++++||+++|||++....+.     ...+...++.   .+.+.....+..   .+. .+++
T Consensus         6 ~~~~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~l   76 (170)
T d1zswa2           6 AKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ-----EAIFQSIKGEAFGEIVVKYLDGPTE---KPG-RGSI   76 (170)
T ss_dssp             GGGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECSS-----EEEEESSTTCSTTCEEEEECCSSBC---BCC-BTCE
T ss_pred             hhHHhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecCc-----eEEEEeccCccceEEEecccccccc---ccC-cccc
Confidence            345788999999999999999999999999999876431     1233323222   222222222211   122 2347


Q ss_pred             eEEEEEeCC---HHHHHHHHHHCCCeEecc--CCCceEEEEEcCCCCeEEEEee
Q 031406          110 RHTCIAIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       110 ~hi~f~v~d---~~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +||||.|+|   ++++++++.++|+.+...  ..+++++||+|||||.|||+..
T Consensus        77 ~HiAf~V~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~s~Yf~DPdG~~iEl~t~  130 (170)
T d1zswa2          77 HHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATD  130 (170)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEE
T ss_pred             ceEEEEeCChHHHHHHHHHHHhcCCCccccccCCCEEEEEEECCCCcEEEEEEC
Confidence            899999985   778899999999998653  3567899999999999999874

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.87  E-value=8.8e-22  Score=124.12  Aligned_cols=106  Identities=16%  Similarity=0.238  Sum_probs=80.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeC-CcEEEEEecCCCCCCCCCCCCCCCceEEEEEe
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  116 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g-~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  116 (160)
                      ++|+||+|.|+|++++++||+++|||+.......     ...++..+ +..+.+........        ++..|++|.|
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--------~~~~h~~f~v   68 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN-----AFAVMRDNDGFILTLMKGKEVQY--------PKTFHVGFPQ   68 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT-----TEEEEECTTCCEEEEEECSSCCC--------CTTCCEEEEC
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC-----cceeeeecceeeeeeeeeecccc--------cccceeeeee
Confidence            4789999999999999999999999998775431     12333333 44566655433221        2358999999


Q ss_pred             CC---HHHHHHHHHHCCCeEeccC-CCceEEEEEcCCCCeEEEE
Q 031406          117 RD---VSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFT  156 (160)
Q Consensus       117 ~d---~~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdG~~ie~~  156 (160)
                      +|   +++++++++++|+++...+ .+++.+||+|||||.|||+
T Consensus        69 ~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          69 ESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCCCEEC-CEEEEEEETTTEEEEEE
T ss_pred             ccccchhhhhhhHHHcCCccccCCCCceEEEEEECCCCCEEEEE
Confidence            86   6678999999999987654 4578999999999999996

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.86  E-value=2e-21  Score=125.99  Aligned_cols=105  Identities=17%  Similarity=0.157  Sum_probs=83.1

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcE--EEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEM--IHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        37 ~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~--~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      |.+|+||+|.|+|++++++||+++|||++.....      ...++..++..  +.+....  .         .++.|++|
T Consensus         2 I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~l~~~~--~---------~~~~h~~f   64 (131)
T d1lgta1           2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRIAVQQGE--V---------DDLAFAGY   64 (131)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT--T---------CEEEEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCCceEEEEecCC--C---------CCceEEEE
Confidence            5789999999999999999999999999887543      34778877543  4433221  1         23789999


Q ss_pred             EeC---CHHHHHHHHHHCCCeEeccC-------CCceEEEEEcCCCCeEEEEee
Q 031406          115 AIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       115 ~v~---d~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      .|.   |++++.++|+++|+++...+       ...+.+||+|||||.||++..
T Consensus        65 ~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~  118 (131)
T d1lgta1          65 EVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYG  118 (131)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             EEccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeC
Confidence            996   56778999999999997643       356789999999999999753

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=4e-21  Score=130.22  Aligned_cols=133  Identities=15%  Similarity=0.184  Sum_probs=91.8

Q ss_pred             CCCccCCCceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCc-------------------E
Q 031406           27 HNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-------------------M   87 (160)
Q Consensus        27 ~~~~~~~~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~-------------------~   87 (160)
                      .+..+.......+++|++|.|+|+++|++||+++|||++......+..+....++..+..                   .
T Consensus        11 ~~~~~~~~~~~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (176)
T d1qipa_          11 CCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKAT   90 (176)
T ss_dssp             TCCCCCGGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSE
T ss_pred             hhcCCCCCccceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccc
Confidence            334444444455799999999999999999999999998765554444444455444321                   2


Q ss_pred             EEEEecCCC---CCCC--CCCCCCCCceEEEEEeCCHHHHHHHHHHCCCeEeccCC---CceEEEEEcCCCCeEEEEeeC
Q 031406           88 IHLMELPNP---DPLS--GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus        88 ~~l~~~~~~---~~~~--~~~~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~~---g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      ..+......   ....  .......++.|+||.++|+++++++|+++|+++..++.   +.+.+|++|||||.|||+|.+
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~~~~f~~DPdG~~IElvq~~  170 (176)
T d1qipa_          91 LELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  170 (176)
T ss_dssp             EEEEEETTGGGCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             eeEEEeeccccccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCceEEEEEECCCCCEEEEEeCC
Confidence            222222211   1111  11122345789999999999999999999999987642   345688999999999999975

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.86  E-value=3.1e-21  Score=129.41  Aligned_cols=115  Identities=15%  Similarity=0.248  Sum_probs=84.1

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  115 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  115 (160)
                      ...+++||.|.|+|++++++||+++|||++..............++..+.............        ..+..|++|.
T Consensus         2 ~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~h~~~~   73 (162)
T d1mpya2           2 AAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHPE--------KGRLHHVSFH   73 (162)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEECSS--------SSEEEEEEEE
T ss_pred             CcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccccccccccccCC--------CCccceeEEE
Confidence            45689999999999999999999999999987665555444455555544322111111111        1336899999


Q ss_pred             eCCHH---HHHHHHHHCCCeEeccC-----CCceEEEEEcCCCCeEEEEee
Q 031406          116 IRDVS---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       116 v~d~~---~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +.+++   +++++|+++|+++..++     .+.+++||+|||||.|||...
T Consensus        74 ~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~  124 (162)
T d1mpya2          74 LETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCG  124 (162)
T ss_dssp             CSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEEC
T ss_pred             EeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEEC
Confidence            98665   67899999999886542     245789999999999999864

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.86  E-value=1.7e-21  Score=126.11  Aligned_cols=118  Identities=21%  Similarity=0.278  Sum_probs=85.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCc---EEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE---MIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~---~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      ++|.||+|.|+|+++|++||+++|||++..............+......   ............   .........++++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   78 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVT---SYKHDEAYGHIAI   78 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCC---CCCCCSSEEEEEE
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcc---cccCCCccceeee
Confidence            5899999999999999999999999999876543333332333333211   111111111111   1122344678999


Q ss_pred             EeCCHHHHHHHHHHCCCeEeccCCCceEEEEEcCCCCeEEEEee
Q 031406          115 AIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       115 ~v~d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      .++++.+.++++...++.+...+.+.+.+||+|||||.|||++.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~iEl~~~  122 (139)
T d2c21a1          79 GVEDVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLNE  122 (139)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEECSSSSEEEEECTTSCEEEEEEH
T ss_pred             ehhhHHHHHHHHHHcCCceeeCCCCcEEEEEECCCCCEEEEEEC
Confidence            99999999999999999999888888999999999999999984

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.84  E-value=1.4e-20  Score=122.18  Aligned_cols=107  Identities=13%  Similarity=0.139  Sum_probs=83.0

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEe
Q 031406           37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  116 (160)
Q Consensus        37 ~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  116 (160)
                      +.+|+||+|.|+|++++++||+++|||++.....      ...|+..++....+......         ..+..|++|.|
T Consensus         2 i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~~~~~~---------~~~~~h~~f~v   66 (132)
T d1kw3b1           2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWRIAVQPGE---------LDDLAYAGLEV   66 (132)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT---------TCEEEEEEEEC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeecceeeeeeccC---------CCCceEEEEEe
Confidence            5689999999999999999999999999877543      34778877553222222211         13479999999


Q ss_pred             C---CHHHHHHHHHHCCCeEeccC-------CCceEEEEEcCCCCeEEEEee
Q 031406          117 R---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       117 ~---d~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +   |++++.++++++|+++...+       ...+.+||+|||||.|||+..
T Consensus        67 ~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~  118 (132)
T d1kw3b1          67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYG  118 (132)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             ccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEEC
Confidence            6   57789999999999997643       345789999999999999854

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.84  E-value=6.8e-21  Score=124.24  Aligned_cols=116  Identities=16%  Similarity=0.183  Sum_probs=82.3

Q ss_pred             eeeeEEEE----eCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEE--EecCCCCCCCCCCCCCCCceEE
Q 031406           39 SVHHVGIL----CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHL--MELPNPDPLSGRPEHGGRDRHT  112 (160)
Q Consensus        39 ~i~hv~l~----v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l--~~~~~~~~~~~~~~~~~~~~hi  112 (160)
                      +|.|+.++    |+|+++|++||+++|||++....... ..+..+++..++..+.+  ........    +...+...|+
T Consensus         5 ~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~hl   79 (137)
T d1twua_           5 SFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQH-NGYDGVMFGLPHADYHLEFTQYEGGST----APVPHPDSLL   79 (137)
T ss_dssp             SCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEE-TTEEEEEEESSSSSEEEEEEEETTCCC----CCCCCTTCEE
T ss_pred             CCceEEEEEecccCCHHHHHHHHHhccCCceeeeeccc-cceeEEEecCCCCceeeeccccccccc----ccccccCceE
Confidence            44555555    58999999999999999987654322 23455667666554443  33332221    1223446899


Q ss_pred             EEEeCC---HHHHHHHHHHCCCeEeccC---CCceEEEEEcCCCCeEEEEeeC
Q 031406          113 CIAIRD---VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       113 ~f~v~d---~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      +|.|++   +++++++|+++|+++..++   ++.+.+||+||||++|||++..
T Consensus        80 af~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPDG~~Iel~~~~  132 (137)
T d1twua_          80 VFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSK  132 (137)
T ss_dssp             EEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSC
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCeEeCCCCCCCCceEEEEECCCCCEEEEEcCC
Confidence            999875   7788999999999988654   3567899999999999999764

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.84  E-value=1.9e-20  Score=120.63  Aligned_cols=117  Identities=20%  Similarity=0.257  Sum_probs=82.2

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCCC--CCCCCCCCCCCCceEEEEE
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP--DPLSGRPEHGGRDRHTCIA  115 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~~--~~~~~~~~~~~~~~hi~f~  115 (160)
                      +|+|++|.|+|++++++||++ |||........+.    ..++.. ++..+.+......  ..........++..|++|.
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   76 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAP----HTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFE   76 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGCS----EEEEECGGGCEEEEEEHHHHHHHCTTCCCCCSSCSCEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCcccccccccc----ceeeeccceeeeeecccccccccCCCCCCCccccceeEeee
Confidence            789999999999999999977 8998765443222    234444 3445555443211  0111111223345799999


Q ss_pred             eCC---HHHHHHHHHHCCCeEecc----CCCceEEEEEcCCCCeEEEEeeCC
Q 031406          116 IRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  160 (160)
Q Consensus       116 v~d---~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~ie~~~~~~  160 (160)
                      |++   +++++++|+++|+++..+    ++|.+.+||+|||||.|||+++-|
T Consensus        77 v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G~~~~~~~DPdG~~iel~~p~p  128 (128)
T d1klla_          77 FPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPLP  128 (128)
T ss_dssp             CSSHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEECC
T ss_pred             eccchhhHHHHHHHHhccCccccCCeEcCCCcEEEEEECCCCCEEEEEecCC
Confidence            986   677899999999998654    356789999999999999998744

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.83  E-value=3.1e-20  Score=116.35  Aligned_cols=106  Identities=18%  Similarity=0.208  Sum_probs=77.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeC
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  117 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~  117 (160)
                      .++ +..|.|+|+++|++||+++|||+.....+      ....+..++....+.........      +....|++|.++
T Consensus         2 ~ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~   68 (111)
T d2pjsa1           2 RRV-VANIATPEPARAQAFYGDILGMPVAMDHG------WIVTHASPLEAHAQVSFAREGGS------GTDVPDLSIEVD   68 (111)
T ss_dssp             EEE-EEEEECSCGGGGHHHHTTTTCCCEEEECS------SEEEEEEEEEEEEEEEEESSSBT------TBCCCSEEEEES
T ss_pred             eEE-EEEEEeCCHHHHHHHHHHhhCCceeeccc------ceeEeccccccceeeecccccCC------CCceeEEEEEec
Confidence            344 57899999999999999999999876543      12334444333333333222211      122468999999


Q ss_pred             CHHHHHHHHHHCCCeEecc----CCCceEEEEEcCCCCeEEEE
Q 031406          118 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  156 (160)
Q Consensus       118 d~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~ie~~  156 (160)
                      |+++++++++++|+++..+    ++|.+.+|++|||||.|||+
T Consensus        69 dvd~~~~~l~~~g~~~~~~p~~~~~g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          69 NFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             CHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             CHHHHHHHHHhhccccccCCeEcCCCcEEEEEECCCCCEEEeC
Confidence            9999999999999988653    35779999999999999985

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.81  E-value=8.4e-20  Score=122.35  Aligned_cols=125  Identities=14%  Similarity=0.130  Sum_probs=94.9

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCC--CCcceEEEEeCCcEEEEEecCCCCCCCC------CCCC
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK--LPYRGAWLWVGAEMIHLMELPNPDPLSG------RPEH  105 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~--~~~~~~~~~~g~~~~~l~~~~~~~~~~~------~~~~  105 (160)
                      ++.+.+|+||+|.|+|+++|++||+++|||++......+.  .....+.+..++..+.|.+.........      ....
T Consensus         2 p~~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~   81 (163)
T d1t47a1           2 PFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEH   81 (163)
T ss_dssp             CSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHH
T ss_pred             CCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCCCCCccccccchhhhcC
Confidence            3467899999999999999999999999999886543222  2233455666788888888765432210      0123


Q ss_pred             CCCceEEEEEeCCHHHHHHHHHHCCCeEeccC------CC-ceEEEEEcCCCCeEEEEee
Q 031406          106 GGRDRHTCIAIRDVSKLKMILDKAGISYTLSK------SG-RPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       106 ~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~------~g-~~~~~~~DPdG~~ie~~~~  158 (160)
                      +.++.|+||.|+|+++++++|+++|+++..++      .| .+..++++|+|..++|+|.
T Consensus        82 g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier  141 (163)
T d1t47a1          82 GDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDR  141 (163)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             CCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEec
Confidence            55689999999999999999999999986643      22 3678999999999999885

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.81  E-value=1e-19  Score=119.86  Aligned_cols=108  Identities=20%  Similarity=0.248  Sum_probs=79.7

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCc--EEEEEecCCCCCCCCCCCCCCCceEE
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHT  112 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~hi  112 (160)
                      ..+.+|+||.|.|+|++++++||+++|||+......      ...++...+.  .+.+......         ..++.|+
T Consensus        12 ~~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---------~~~~~h~   76 (146)
T d1f1ua1          12 PDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQGP---------IAAVAAF   76 (146)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS---------SCEEEEE
T ss_pred             CCCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC------CceeeecccccccceeeccccC---------CCCCcee
Confidence            347899999999999999999999999999987543      1244443222  1111111111         1236899


Q ss_pred             EEEeC---CHHHHHHHHHHCCCeEeccC----C-CceEEEEEcCCCCeEEEEe
Q 031406          113 CIAIR---DVSKLKMILDKAGISYTLSK----S-GRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       113 ~f~v~---d~~~~~~~l~~~G~~~~~~~----~-g~~~~~~~DPdG~~ie~~~  157 (160)
                      +|.+.   |+++++++|+++|+++...+    . .++.+||+|||||.|||+.
T Consensus        77 ~~~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~  129 (146)
T d1f1ua1          77 AYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFY  129 (146)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEEC
T ss_pred             eEeeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEE
Confidence            99997   68889999999999986542    2 3588999999999999986

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.80  E-value=2.1e-18  Score=109.67  Aligned_cols=102  Identities=24%  Similarity=0.339  Sum_probs=80.8

Q ss_pred             EEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeCCHHHHH
Q 031406           44 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK  123 (160)
Q Consensus        44 ~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~~~~~  123 (160)
                      .|.|+|+++|++||++ |||++.....      ...++..++..+.+.......+.       ....++++.++|+++++
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~d~~~~~   72 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEFFAHPGLDPL-------ASWFSCCLRLDDLAEFY   72 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECS------SEEEEEETTEEEEEEECTTCCGG-------GCCCEEEEEESCHHHHH
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecC------ceeeeecceeccccccccccccC-------CCCcEEEEEECCHHHHH
Confidence            4999999999999987 9999987543      23666667777777776644322       12367999999999999


Q ss_pred             HHHHHCCCeEecc-----------CCCceEEEEEcCCCCeEEEEeeC
Q 031406          124 MILDKAGISYTLS-----------KSGRPAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       124 ~~l~~~G~~~~~~-----------~~g~~~~~~~DPdG~~ie~~~~~  159 (160)
                      ++++++|+.+...           ++|.+.+||+|||||.|||.|.|
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          73 RQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             HHHhhhhhhhccccccccccceecCCCcEEEEEECCCCCEEEEEEcc
Confidence            9999999886431           35779999999999999999975

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.80  E-value=8.5e-19  Score=111.57  Aligned_cols=101  Identities=17%  Similarity=0.183  Sum_probs=81.1

Q ss_pred             EEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeCCHHHHH
Q 031406           44 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK  123 (160)
Q Consensus        44 ~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~~~~~  123 (160)
                      .|.|+|+++|++||+++|||++....+      ..+++..++..+.+.........        ...++.+.+.|+++++
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~~~--------~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR------DFAGVRRGDIRLHISRTEHQIVA--------DNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCHHHH--------TTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC------ceeEeeeeeeeeeeecccccccc--------ceeEEEEeechhHHHH
Confidence            489999999999999999999876533      23677888888888877654321        1368999999999999


Q ss_pred             HHHHHCCCeEecc-----------CCCceEEEEEcCCCCeEEEEee
Q 031406          124 MILDKAGISYTLS-----------KSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       124 ~~l~~~G~~~~~~-----------~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +++++++......           .++++.+|++|||||+|||.+.
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             HHHHhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence            9999998766321           2467899999999999999874

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.79  E-value=3.1e-19  Score=117.07  Aligned_cols=106  Identities=18%  Similarity=0.225  Sum_probs=75.3

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCc----EEEEEecCCCCCCCCCCCCCCCceE
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRH  111 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~----~~~l~~~~~~~~~~~~~~~~~~~~h  111 (160)
                      .+++|+||.|.|+|++++++||+++|||++........     .+....+.    ...+... +.          ....|
T Consensus         4 ~i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~----------~~~~~   67 (145)
T d1mpya1           4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGR-----VYLKAWTEVDKFSLVLREA-DE----------PGMDF   67 (145)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTSC-----EEEECTTCCBSCSEEEEEC-SS----------CEEEE
T ss_pred             CCcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeeccCc-----cceecccccceeecccccc-Cc----------cccee
Confidence            37899999999999999999999999999886533211     22233221    1122211 11          12356


Q ss_pred             EEEEeC---CHHHHHHHHHHCCCeEeccC----CC-ceEEEEEcCCCCeEEEEe
Q 031406          112 TCIAIR---DVSKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       112 i~f~v~---d~~~~~~~l~~~G~~~~~~~----~g-~~~~~~~DPdG~~ie~~~  157 (160)
                      +++.+.   |+++++++|+++|+++...+    .+ ++.+||+|||||.|||++
T Consensus        68 ~~~~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~  121 (145)
T d1mpya1          68 MGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYA  121 (145)
T ss_dssp             EEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEES
T ss_pred             eeeeehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEE
Confidence            666654   78899999999999986532    23 589999999999999986

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.79  E-value=3.8e-19  Score=120.60  Aligned_cols=112  Identities=17%  Similarity=0.225  Sum_probs=79.9

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEe
Q 031406           37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  116 (160)
Q Consensus        37 ~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  116 (160)
                      +.+|+||+|.|+|++++++|| ++|||++.............+|+..++....+......         ..+.+|++|.+
T Consensus         3 i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~H~~f~~   72 (176)
T d1f1ua2           3 LVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN---------GPRMHHVAFAT   72 (176)
T ss_dssp             CCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESS---------BSEEEEEEEEC
T ss_pred             eeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCccccceeccccc---------CCCccceeEEe
Confidence            568999999999999999999 67999998765544444445666665443322222211         13379999999


Q ss_pred             CCHH---HHHHHHHHCCCeEe--cc-----CCCceEEEEEcCCCCeEEEEee
Q 031406          117 RDVS---KLKMILDKAGISYT--LS-----KSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       117 ~d~~---~~~~~l~~~G~~~~--~~-----~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      .+++   ++.++|+++|+...  ..     .+...++||+|||||.||++..
T Consensus        73 ~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~  124 (176)
T d1f1ua2          73 HEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQ  124 (176)
T ss_dssp             SSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             ccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeC
Confidence            8554   56789999998642  22     1345789999999999999863

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=6.6e-19  Score=116.18  Aligned_cols=124  Identities=15%  Similarity=0.151  Sum_probs=91.7

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCC--CcceEEEEeCCcEEEEEecCCCCCCC-CC--CCCCCCce
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL--PYRGAWLWVGAEMIHLMELPNPDPLS-GR--PEHGGRDR  110 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~--~~~~~~~~~g~~~~~l~~~~~~~~~~-~~--~~~~~~~~  110 (160)
                      .+.+++||+|.|+|+++|++||+++|||+.......+..  ....+.+..++..+.|.......... ..  ...+.++.
T Consensus         8 ~~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~G~~   87 (149)
T d1sqia1           8 RFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGVK   87 (149)
T ss_dssp             EEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSEEE
T ss_pred             ceeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCCCeEE
Confidence            567999999999999999999999999998765442222  22234455677788887765433211 00  12356689


Q ss_pred             EEEEEeCCHHHHHHHHHHCCCeEeccC------CCc-eEEEEEcCCCCeEEEEeeC
Q 031406          111 HTCIAIRDVSKLKMILDKAGISYTLSK------SGR-PAIFTRDPDANALEFTQVD  159 (160)
Q Consensus       111 hi~f~v~d~~~~~~~l~~~G~~~~~~~------~g~-~~~~~~DPdG~~ie~~~~~  159 (160)
                      |+||.|+|+++++++|+++|+++..++      .|. +.++++.|+|..++|+|..
T Consensus        88 hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~  143 (149)
T d1sqia1          88 DIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKI  143 (149)
T ss_dssp             EEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             EEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeC
Confidence            999999999999999999999986543      222 4678888888999999864

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.78  E-value=4.9e-18  Score=113.96  Aligned_cols=128  Identities=14%  Similarity=0.116  Sum_probs=92.5

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcce--EEEEeCCcEEEEEecCCCCCCC---------C
Q 031406           33 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRG--AWLWVGAEMIHLMELPNPDPLS---------G  101 (160)
Q Consensus        33 ~~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~--~~~~~g~~~~~l~~~~~~~~~~---------~  101 (160)
                      ..+.+.+++||+|.|+|++++++||+++|||+.......+......  ..+..++..+.+..........         .
T Consensus         6 ~~~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~   85 (167)
T d1sqda1           6 DKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTAS   85 (167)
T ss_dssp             CSSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCS
T ss_pred             CCCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEeccccccccccccccccccc
Confidence            3567889999999999999999999999999988765433222222  2244455555554432211100         0


Q ss_pred             CC------------CCCCCceEEEEEeCCHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEeeCC
Q 031406          102 RP------------EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVDG  160 (160)
Q Consensus       102 ~~------------~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~~~  160 (160)
                      .+            .++.++.||||.|+|+++++++|+++|+++..+|    ++.+..+++.+++..++|+++.+
T Consensus        86 ~~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r~~  160 (167)
T d1sqda1          86 IPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKA  160 (167)
T ss_dssp             STTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEECC
T ss_pred             cccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCEEEEEEEccCCcEEEEEecCC
Confidence            00            1245689999999999999999999999987654    45677899999999999999754

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.76  E-value=2.4e-18  Score=114.42  Aligned_cols=113  Identities=15%  Similarity=0.186  Sum_probs=77.4

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCC---CCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEE
Q 031406           37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPH---DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  113 (160)
Q Consensus        37 ~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~---~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~  113 (160)
                      ..+|+|++|.|+|++++++||+++|||++......   ........++..+.....+.....+.        ..+++|++
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~a~~~~~~--------~~gl~Hia   79 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFPI--------PKRIHHFM   79 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCSC--------SSSEEEEE
T ss_pred             CCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccceeeeccCCC--------CCceeEEE
Confidence            35899999999999999999999999998753221   11112234555544322222222111        13479999


Q ss_pred             EEeCCHH---HHHHHHHHCCCeEeccC----CCceEEEEEcCCCC-eEEEEe
Q 031406          114 IAIRDVS---KLKMILDKAGISYTLSK----SGRPAIFTRDPDAN-ALEFTQ  157 (160)
Q Consensus       114 f~v~d~~---~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~-~ie~~~  157 (160)
                      |+|++++   +++++|+++|+.+..+.    +...++|++||||| .+|+..
T Consensus        80 f~v~~~ddv~~~~d~l~~~G~~~~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~  131 (156)
T d1kw3b2          80 LQANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGW  131 (156)
T ss_dssp             EEBSSHHHHHHHHHHHHHTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEE
T ss_pred             EECCCHHHHHHHHHHHHhcCCceecCcccCCCCeEEEEEECCCCCeEEEEec
Confidence            9998554   57899999998764331    34678999999998 589865

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.75  E-value=2.8e-17  Score=110.86  Aligned_cols=127  Identities=13%  Similarity=0.094  Sum_probs=92.4

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCC--cceEEEEeCCcEEEEEecCCCCCCCC---C------
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP--YRGAWLWVGAEMIHLMELPNPDPLSG---R------  102 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~--~~~~~~~~g~~~~~l~~~~~~~~~~~---~------  102 (160)
                      ...+.+++||+|.|+|+++++.||+++|||+...........  .....+..++..+.+...........   .      
T Consensus         8 ~~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (172)
T d1sp8a1           8 RFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAA   87 (172)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHH
T ss_pred             cCCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCCcc
Confidence            446789999999999999999999999999998654432222  12223444666666655443221100   0      


Q ss_pred             ------CCCCCCceEEEEEeCCHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEeeCC
Q 031406          103 ------PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVDG  160 (160)
Q Consensus       103 ------~~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~~~~  160 (160)
                            ..++.++.||||.|+|+++++++|+++|+++..++    ++.+..+++.|.+.+++|+|.++
T Consensus        88 ~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~~~  155 (172)
T d1sp8a1          88 AARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYPD  155 (172)
T ss_dssp             HHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECCT
T ss_pred             hhhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCEEEEEEECCCCcEEEEEecCC
Confidence                  01356789999999999999999999999997654    45678888888888899999763

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.74  E-value=4.1e-17  Score=105.65  Aligned_cols=115  Identities=11%  Similarity=0.038  Sum_probs=81.7

Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeecCCCC-------CCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           42 HVGILCENLERSLEFYQNILGLEINEARPHDK-------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        42 hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~-------~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      ++.|.+.|+++|.+||+++||+++......+.       .......+.+++..+.+............... +...++++
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~   88 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFSTAKSE-GSGVTFLL   88 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCCCCCTT-SCCCEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCeeeeccccccccccccCCCC-CcceEEEE
Confidence            35566679999999999999999875432211       11224567778877777665433222222222 33368999


Q ss_pred             EeCCHHHHHHHHHHCCCeEeccC----CCceEEEEEcCCCCeEEEEe
Q 031406          115 AIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       115 ~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~ie~~~  157 (160)
                      .++|+++++++++++|+++..++    +|.+.++++||+|+.|+|.|
T Consensus        89 ~v~d~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          89 GTKDAEAAVAKAVDAGAVKVEVTEAEVELGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             ECSCHHHHHHHHHHTTCEECCCCHHHHHTTEEEEEECTTSCEEEEEC
T ss_pred             eecCcceeEEEeecccceEecCcccccccCEEEEEECCCCCEEEEeC
Confidence            99999999999999999998765    57889999999999999976

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.72  E-value=1.6e-16  Score=100.36  Aligned_cols=102  Identities=12%  Similarity=0.124  Sum_probs=78.7

Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeCCHHH
Q 031406           42 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK  121 (160)
Q Consensus        42 hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d~~~  121 (160)
                      ...|.|+|+++|++||+++|||++....+      ...++..++..+.+.........        ...++.+.+++++.
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~--------~~~~~~~~~~~~~~   72 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQVVP--------DNTQAWVWVRGLDE   72 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCTTTG--------GGCEEEEEEECHHH
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECC------CeeEEecccceeeccccccccCC--------CCceEEEeeccHHH
Confidence            34489999999999999999999987544      23667788888888877654322        24678899999999


Q ss_pred             HHHHHHHCCCeEecc-----------CCCceEEEEEcCCCCeEEEEe
Q 031406          122 LKMILDKAGISYTLS-----------KSGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       122 ~~~~l~~~G~~~~~~-----------~~g~~~~~~~DPdG~~ie~~~  157 (160)
                      .++.+.+++......           .++++.+||+|||||.|||+.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          73 LYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHHTTTSBSCTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHhhhHHhhhcccccccCceecCCEEEEEEECCCCCEEEEEE
Confidence            988888776654321           135689999999999999975

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.61  E-value=3.8e-16  Score=102.89  Aligned_cols=118  Identities=10%  Similarity=0.055  Sum_probs=85.1

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEeCCcEEEEEecCCCCCCC--CCCCCCCCceE
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS--GRPEHGGRDRH  111 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~--~~~~~~~~~~h  111 (160)
                      ++.+.+|+||.+.|+|++++.+||++ |||+........    ....+..|+..+.+.  ....+..  ....++.++.|
T Consensus         4 p~g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~----~~~l~~~G~i~ll~~--~~~~s~~~~~~~~hg~gv~h   76 (150)
T d1cjxa1           4 PMGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSK----NVHLYRQGEINLILN--NEPNSIASYFAAEHGPSVCG   76 (150)
T ss_dssp             TTCEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSS----SEEEEEETTEEEEEE--CCSSSHHHHHHHHHSSEEEE
T ss_pred             CCccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccce----EEEEEecCcEEEEec--CCCCCHhHhHHhhCCCceEE
Confidence            34678999999999999999999987 999988754322    223345566444332  2222211  11245778999


Q ss_pred             EEEEeCCHHHHHHHHHHCCCeEeccC---CCceEEEEEcCCCCeEEEEee
Q 031406          112 TCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       112 i~f~v~d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +||.|+|++++++++.++|+++...+   .......+++|+|.++.|++.
T Consensus        77 iaf~V~D~~~a~~~a~~~Ga~~i~~~~~~g~~~~~~i~g~gg~~i~Fv~~  126 (150)
T d1cjxa1          77 MAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDR  126 (150)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECC
T ss_pred             EEEEeCCHHHHHHHHHHCCCEEcccCCCCCceeeeEEEcCCCCEEEEECc
Confidence            99999999999999999999987654   223456778888888888774

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.39  E-value=9.3e-13  Score=91.64  Aligned_cols=99  Identities=14%  Similarity=0.135  Sum_probs=68.1

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCC-----CCcceEEEEe--CCcEEEEEecCCCCCCCCC----
Q 031406           34 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWV--GAEMIHLMELPNPDPLSGR----  102 (160)
Q Consensus        34 ~~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~-----~~~~~~~~~~--g~~~~~l~~~~~~~~~~~~----  102 (160)
                      ...+.+|+||++.|+|+++++.||+++|||+.........     ...+...+..  +...+.+.+...+......    
T Consensus         4 d~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i~~F   83 (224)
T d1sp8a2           4 DYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTF   83 (224)
T ss_dssp             CCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHH
T ss_pred             CCCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCCccHHHHH
Confidence            4467899999999999999999999999998765432221     2223333444  3446777765433221111    


Q ss_pred             --CCCCCCceEEEEEeCCHHHHHHHHHHCCCe
Q 031406          103 --PEHGGRDRHTCIAIRDVSKLKMILDKAGIS  132 (160)
Q Consensus       103 --~~~~~~~~hi~f~v~d~~~~~~~l~~~G~~  132 (160)
                        ...+.+++||||.|+|+.+++++|+++|+.
T Consensus        84 L~~~~g~GiqHIAf~vdDI~~av~~L~arGv~  115 (224)
T d1sp8a2          84 LDHHGGPGVQHMALASDDVLRTLREMQARSAM  115 (224)
T ss_dssp             HHHHTSSEEEEEEEEETTHHHHHHHHHTSGGG
T ss_pred             HHhccCCCceeEEEEeCCHHHHHHHHHhcccc
Confidence              123567899999999999999999988643

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.35  E-value=4.1e-11  Score=77.09  Aligned_cols=106  Identities=14%  Similarity=0.041  Sum_probs=72.3

Q ss_pred             CCHHHHHHHHHHhcCCEEeeecCCCCC------------CcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 031406           48 ENLERSLEFYQNILGLEINEARPHDKL------------PYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  115 (160)
Q Consensus        48 ~D~~~a~~Fy~~~lG~~~~~~~~~~~~------------~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  115 (160)
                      .|.++|++||+++||+++.........            ....+.+.+++..+.+.......+     ...+...++++.
T Consensus        12 g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~~~~~d~~~~~~-----~~~~~~~~~~l~   86 (137)
T d1u6la_          12 GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPAYP-----YEGIKGCSISLN   86 (137)
T ss_dssp             SCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCTTSC-----CCCCCSEEEEEE
T ss_pred             CCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCeEEEecccCCccc-----ccCCCcEEEEEE
Confidence            499999999999999998753321111            112245666776666554432221     112234788898


Q ss_pred             eCCHH--HHHHHHHHCCCeEecc----CCCceEEEEEcCCCCeEEEEee
Q 031406          116 IRDVS--KLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       116 v~d~~--~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +++.+  +.+.++.++|.++..+    ++|.+.++|+||+|+.|.|...
T Consensus        87 ~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          87 VDSKAEAERLFNALAEGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             CSSHHHHHHHHHHHHTTSEEEEEEEEETTEEEEEEEECTTSCEEEEEES
T ss_pred             cCCHHHHHHHHhhcccCceeecCccccCCCcEEEEEECCCCCEEEEEec
Confidence            88655  4577777889999765    3677899999999999999754

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.34  E-value=2e-12  Score=88.70  Aligned_cols=99  Identities=13%  Similarity=0.077  Sum_probs=68.4

Q ss_pred             eeeeeeEEEEeC--CHHHHHHHHHHhcCCEEeeecCC--CCCCcceEEEEeC--CcEEEEEecCCCCCC-CCC---CCCC
Q 031406           37 VVSVHHVGILCE--NLERSLEFYQNILGLEINEARPH--DKLPYRGAWLWVG--AEMIHLMELPNPDPL-SGR---PEHG  106 (160)
Q Consensus        37 ~~~i~hv~l~v~--D~~~a~~Fy~~~lG~~~~~~~~~--~~~~~~~~~~~~g--~~~~~l~~~~~~~~~-~~~---~~~~  106 (160)
                      +.+|+||++.|+  |+++++.||+++|||+.......  +........+...  ...+.+......... ...   ...|
T Consensus         3 l~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~g   82 (203)
T d1cjxa2           3 LKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNG   82 (203)
T ss_dssp             EEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTS
T ss_pred             CCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcCC
Confidence            578999999997  99999999999999998765432  2222223333333  334444443322211 110   1245


Q ss_pred             CCceEEEEEeCCHHHHHHHHHHCCCeEec
Q 031406          107 GRDRHTCIAIRDVSKLKMILDKAGISYTL  135 (160)
Q Consensus       107 ~~~~hi~f~v~d~~~~~~~l~~~G~~~~~  135 (160)
                      .++.||||.|+|+.+++++|+++|+++..
T Consensus        83 ~GiqHIAf~vdDI~aav~~L~~~Gv~fL~  111 (203)
T d1cjxa2          83 EGIQHVAFLTDDLVKTWDALKKIGMRFMT  111 (203)
T ss_dssp             SBCCEEEEEESCHHHHHHHHHHTTCCBCC
T ss_pred             CCCceEEEEeCCHHHHHHHHHhcCCcccc
Confidence            67899999999999999999999999864

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=8.8e-12  Score=85.69  Aligned_cols=103  Identities=13%  Similarity=0.068  Sum_probs=69.5

Q ss_pred             CCceeeeeeeEEEEeCC--HHHHHHHHHHhcCCEEeeecCCC-----CCCcceEEEEeC--CcEEEEEecCCCCCCC--C
Q 031406           33 RDYGVVSVHHVGILCEN--LERSLEFYQNILGLEINEARPHD-----KLPYRGAWLWVG--AEMIHLMELPNPDPLS--G  101 (160)
Q Consensus        33 ~~~~~~~i~hv~l~v~D--~~~a~~Fy~~~lG~~~~~~~~~~-----~~~~~~~~~~~g--~~~~~l~~~~~~~~~~--~  101 (160)
                      +...+.+|+||++.|.+  +++++.||+++|||+........     ....+...+..+  ...+.+..........  .
T Consensus        18 p~~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~~lne~~~~~~~sqi~   97 (210)
T d1sqia2          18 PSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQIQ   97 (210)
T ss_dssp             CCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCCEEEEEECC-----CHHH
T ss_pred             CCCCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCccccccccccCCCCcccHHH
Confidence            44568899999999987  99999999999999876543211     112233344443  3356665544322111  1


Q ss_pred             C---CCCCCCceEEEEEeCCHHHHHHHHHHCCCeEec
Q 031406          102 R---PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL  135 (160)
Q Consensus       102 ~---~~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~  135 (160)
                      .   ...|.++.||||.|+|+.+++++|+++|+++..
T Consensus        98 ~fl~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~  134 (210)
T d1sqia2          98 EYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLA  134 (210)
T ss_dssp             HHHHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCC
T ss_pred             HHHhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCC
Confidence            1   134678999999999999999999999999864

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.21  E-value=2.5e-11  Score=82.72  Aligned_cols=102  Identities=12%  Similarity=0.117  Sum_probs=69.0

Q ss_pred             eeeeeeeEEEEeC--CHHHHHHHHHHhcCCEEeeecCC-----CCCCcceEEEEeC--CcEEEEEecCCCC--CCCCC--
Q 031406           36 GVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPH-----DKLPYRGAWLWVG--AEMIHLMELPNPD--PLSGR--  102 (160)
Q Consensus        36 ~~~~i~hv~l~v~--D~~~a~~Fy~~~lG~~~~~~~~~-----~~~~~~~~~~~~g--~~~~~l~~~~~~~--~~~~~--  102 (160)
                      +..+|+||++.|+  +++++..||+++|||+.......     +.......-+..+  ...+.+.......  +....  
T Consensus         3 ~f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~FL   82 (199)
T d1t47a2           3 TFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYL   82 (199)
T ss_dssp             SCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHH
T ss_pred             cceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhhh
Confidence            3568999999998  99999999999999987654321     1222222223333  2355555433222  11111  


Q ss_pred             -CCCCCCceEEEEEeCCHHHHHHHHHHCCCeEeccC
Q 031406          103 -PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK  137 (160)
Q Consensus       103 -~~~~~~~~hi~f~v~d~~~~~~~l~~~G~~~~~~~  137 (160)
                       ...|.++.||||.|+|+.++++.|+++|+++...+
T Consensus        83 ~~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p  118 (199)
T d1t47a2          83 EFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP  118 (199)
T ss_dssp             HHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCC
T ss_pred             hhcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence             12356799999999999999999999999986543

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.13  E-value=5.7e-09  Score=66.65  Aligned_cols=111  Identities=8%  Similarity=0.031  Sum_probs=72.1

Q ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeec-------CCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           42 HVGILCENLERSLEFYQNILGLEINEAR-------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        42 hv~l~v~D~~~a~~Fy~~~lG~~~~~~~-------~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      ++.+.-+|.++|.+||+++||.+.....       +.+......+-|.+++..+.+.........    ..++ ..++++
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~~~i~~~d~~~~~~~----~~~~-~~s~~l   83 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRHAF----DFTP-AFSFFV   83 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCCSC----CCCT-TEEEEE
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECCEEEEEecCCCCCCC----CCCC-ceEEEE
Confidence            3344446899999999999998754321       111222334667788888887765432221    1122 356888


Q ss_pred             EeCCHHHH--HHHHHHCCCeEecc----CCCceEEEEEcCCCCeEEEEe
Q 031406          115 AIRDVSKL--KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       115 ~v~d~~~~--~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~ie~~~  157 (160)
                      .+++.++.  +.+..++|.++..+    .++.+...++||.|+.|.|.-
T Consensus        84 ~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~~  132 (134)
T d1u7ia_          84 DCESNAQIERLAEALSDGGKALMPLGDYGFSQRFAWLADRFGVSWQLNL  132 (134)
T ss_dssp             ECCCHHHHHHHHHHHHTTSEEEEEEECCSSSSEEEEEECTTSCEEEEEE
T ss_pred             EeccHHHHHHHHHHHhcCCEEecCcccccccceEEEEECCCCCEEEEEc
Confidence            88765443  44455667787654    367899999999999999863

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.11  E-value=2.2e-10  Score=79.71  Aligned_cols=97  Identities=14%  Similarity=0.140  Sum_probs=65.3

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCC-----cceEEEEe--CCcEEEEEecCCCCCCC---CC--
Q 031406           35 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-----YRGAWLWV--GAEMIHLMELPNPDPLS---GR--  102 (160)
Q Consensus        35 ~~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~-----~~~~~~~~--g~~~~~l~~~~~~~~~~---~~--  102 (160)
                      ..+.+|+||++.|.|++++.+||+.+||+............     .+...+..  +..++.+.+...+....   ..  
T Consensus        18 ~gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~v~~~l~E~~~~~~~~sqi~~FL   97 (230)
T d1sqda2          18 YGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYL   97 (230)
T ss_dssp             SSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHHHH
T ss_pred             CCcCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCcccceeEEeecCCCCCcchHHHHH
Confidence            34789999999999999999999999999877654322221     11222333  34467777654332111   10  


Q ss_pred             -CCCCCCceEEEEEeCCHHHHHHHHHHCCC
Q 031406          103 -PEHGGRDRHTCIAIRDVSKLKMILDKAGI  131 (160)
Q Consensus       103 -~~~~~~~~hi~f~v~d~~~~~~~l~~~G~  131 (160)
                       ...|.+++||||.|+|+.+++++|+++|.
T Consensus        98 ~~~~G~GiQHIAf~tdDI~aav~~LrarG~  127 (230)
T d1sqda2          98 EHNEGAGLQHLALMSEDIFRTLREMRKRSS  127 (230)
T ss_dssp             HHHTSCEEEEEEEEESCHHHHHHHHHHHGG
T ss_pred             hhccCCceeEEEEEeCCHHHHHHHHHHhhc
Confidence             13477899999999999999999998644

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.77  E-value=2.5e-07  Score=58.43  Aligned_cols=106  Identities=9%  Similarity=0.097  Sum_probs=66.8

Q ss_pred             EEEEeC-CHHHHHHHHHHhcCCEEeeec-------CCCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 031406           43 VGILCE-NLERSLEFYQNILGLEINEAR-------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  114 (160)
Q Consensus        43 v~l~v~-D~~~a~~Fy~~~lG~~~~~~~-------~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  114 (160)
                      ..|..+ |.++|.+||+++||-..+...       +.+....-.+-+.+++..+.+.......+.         ..++++
T Consensus         8 Pyl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g~~~~~~d~~~~~~~---------~~s~~v   78 (129)
T d1tsja_           8 TFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANSGTEL---------PISLFV   78 (129)
T ss_dssp             EEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC----------------CCCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECCEEEEeecCCCCCCC---------CEEEEe
Confidence            455565 999999999999965433211       112223344567788887776654432211         134777


Q ss_pred             EeCCHHH---HHHHHHHCCCeEecc----CCCceEEEEEcCCCCeEEEEee
Q 031406          115 AIRDVSK---LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       115 ~v~d~~~---~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      .+++.++   ++++|. .|.++..+    +.+.+...++||.|+.|.|..+
T Consensus        79 ~~~~~~e~~~~~~~L~-~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          79 TVKDTIEMERLFNGLK-DEGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             ECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             ccCCHHHHHHHHHHhc-cCCEEecccccccccceEEEEECCCCCEEEEeCC
Confidence            8887665   455664 56677654    4677899999999999998753

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.79  E-value=0.00092  Score=42.85  Aligned_cols=99  Identities=12%  Similarity=-0.016  Sum_probs=61.1

Q ss_pred             EeCCHHHHHHHHHHhcCCE-Eeee--cC-----CCCCCcceEEEEeCCcEEEEEecCCCCCCCCCCCCCCCceEEEEEeC
Q 031406           46 LCENLERSLEFYQNILGLE-INEA--RP-----HDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  117 (160)
Q Consensus        46 ~v~D~~~a~~Fy~~~lG~~-~~~~--~~-----~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~  117 (160)
                      .-.|.++|.+||+++||=. +...  .+     ......-.+.+.+++..+.+.......      ..+. ..++++.++
T Consensus         9 F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g~~lm~sD~~~~~------~~~~-~~sl~l~~d   81 (156)
T d1u69a_           9 YDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGGPAF------RHSE-AFSFQVATD   81 (156)
T ss_dssp             ESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECCTTC------CCCT-TEEEEEEES
T ss_pred             ECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECCeEEEeecCCCCC------CCCC-CeEEEEecC
Confidence            3589999999999999543 3221  11     111123345677788766555432111      1122 367888998


Q ss_pred             CH---HHHHHHHHHCCCeEeccCCCceEEEEEcCCCCeEEEEe
Q 031406          118 DV---SKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  157 (160)
Q Consensus       118 d~---~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~ie~~~  157 (160)
                      |.   ++++++|.+.| .+..+     ...++|..|..|.|..
T Consensus        82 ~~eE~d~~f~~LsegG-~~~~~-----~G~v~DkFGV~Wqi~~  118 (156)
T d1u69a_          82 DQAETDRLWNAIVDNG-GEESA-----CGWCRDKWGISWQITP  118 (156)
T ss_dssp             SHHHHHHHHHHHHHTT-CEECS-----TTEEECTTSCEEEEEE
T ss_pred             CHHHHHHHHHHHhccC-CCCCC-----CeEEECCCCCEEEeCh
Confidence            65   45678887765 33332     2369999999999875

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.03  E-value=0.014  Score=37.11  Aligned_cols=59  Identities=15%  Similarity=0.061  Sum_probs=42.6

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEE-eCCcEEEEEecCCCC
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELPNPD   97 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~-~g~~~~~l~~~~~~~   97 (160)
                      .++.||++.|.|++++.+.+.+ .|.+..........+.+.+++. .|+..+.|++..+..
T Consensus       103 ~G~~Hiaf~VdDi~aa~~~l~~-~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r~~~~  162 (167)
T d1sqda1         103 LGVRAVAIEVEDAESAFSISVA-NGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKAED  162 (167)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-TTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEECCC-
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCEEecCCeecCCCEEEEEEEccCCcEEEEEecCCCc
Confidence            3899999999999999999987 8998775422222233444444 388888999886654

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=95.86  E-value=0.011  Score=37.91  Aligned_cols=59  Identities=14%  Similarity=0.123  Sum_probs=44.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCCCC
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPD   97 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~~~   97 (160)
                      .++.|+++.|.|++++.+-+.+ .|.++.........+.+.+++.. |+.+++|++..+..
T Consensus        98 ~Gi~Hiaf~VdDi~aa~~~l~~-~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~~~~~  157 (172)
T d1sp8a1          98 LAVRAVALRVADAEDAFRASVA-AGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYPDGA  157 (172)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHT-TTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECCTTG
T ss_pred             CceEEEEEeeCcHHHHHHHHHH-CcCEeccCCccCCCCEEEEEEECCCCcEEEEEecCCCC
Confidence            4889999999999999999987 99987654322223345555554 78899999988654

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=95.62  E-value=0.031  Score=34.23  Aligned_cols=57  Identities=16%  Similarity=0.160  Sum_probs=39.4

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEec
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMEL   93 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~   93 (160)
                      ...++.|+++.|.|++++.+.+++ .|.+..........+.+..|+.. +|..++|++.
T Consensus        90 ~~~g~~hi~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          90 NALGYLRVMFTVEDIDEMVSRLTK-HGAELVGEVVQYENSYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             SSBEEEEEEEEESCHHHHHHHHHH-TTCEESSCCEEETTTEEEEEEECGGGCEEEEEEE
T ss_pred             CCcceeEEEEeechhHHHHHHHHH-CCCeEccCCeECCCCeEEEEEECCCCCEEEEEEc
Confidence            345789999999999999999987 89987643222223334455554 4567787764

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=95.20  E-value=0.05  Score=31.57  Aligned_cols=49  Identities=20%  Similarity=0.307  Sum_probs=38.7

Q ss_pred             ceEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEEcCCCCeEEEEee
Q 031406          109 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       109 ~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      +.|+.+.|+|++++.+...+ .|.++..... ....++.++++..+.+.+.
T Consensus         4 i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~~~~~~~   53 (113)
T d1xqaa_           4 IKHLNLTVADVVAAREFLEKYFGLTCSGTRG-NAFAVMRDNDGFILTLMKG   53 (113)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHCCEEEEEET-TTEEEEECTTCCEEEEEEC
T ss_pred             ccEEEEEeCCHHHHHHHHHHhhCCEEEEeec-Ccceeeeecceeeeeeeee
Confidence            68999999999999888776 6998876543 3456677888888887764

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=94.27  E-value=0.058  Score=32.62  Aligned_cols=57  Identities=14%  Similarity=0.262  Sum_probs=40.2

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCC-CCCCcceEEEEe---CCcEEEEEecC
Q 031406           37 VVSVHHVGILCENLERSLEFYQNILGLEINEARPH-DKLPYRGAWLWV---GAEMIHLMELP   94 (160)
Q Consensus        37 ~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~-~~~~~~~~~~~~---g~~~~~l~~~~   94 (160)
                      ..++.|+++.|.|++++.+-.++ .|.++....+. ...+...+|+..   +|..++|++.+
T Consensus        84 ~~g~~Hia~~v~di~~~~~~l~~-~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          84 RAGLHHMAWRVDDIDAVSATLRE-RGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHH-HTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCcceEEEEecchHHHHHHHHHH-CCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            34799999999999999999987 79987543221 122334455532   57788888864

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=93.42  E-value=0.15  Score=31.66  Aligned_cols=57  Identities=11%  Similarity=0.084  Sum_probs=40.1

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEE-eCCcEEEEEecCCC
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELPNP   96 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~-~g~~~~~l~~~~~~   96 (160)
                      .+++|+++.|.|++++.+.... +|.+...... .........+. .|+..+.+++..+.
T Consensus        72 ~gv~hiaf~V~D~~~a~~~a~~-~Ga~~i~~~~-~~g~~~~~~i~g~gg~~i~Fv~~~~~  129 (150)
T d1cjxa1          72 PSVCGMAFRVKDSQKAYNRALE-LGAQPIHIDT-GPMELNLPAIKGIGGAPLYLIDRFGE  129 (150)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-TTCCBCCCCC-CTTCBCCCEEECGGGCEEEEECCCSS
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCEEcccCC-CCCceeeeEEEcCCCCEEEEECcCCC
Confidence            5899999999999999999976 9998775432 22222223333 36778888876543

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.63  E-value=0.16  Score=31.06  Aligned_cols=59  Identities=19%  Similarity=0.058  Sum_probs=40.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecC---CCCCCcceEEEEe-CCcEEEEEecCCCC
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINEARP---HDKLPYRGAWLWV-GAEMIHLMELPNPD   97 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~---~~~~~~~~~~~~~-g~~~~~l~~~~~~~   97 (160)
                      .++.|+++.|.|++++.+-..+ .|.+......   ........+++.. |+..++|++..+..
T Consensus        84 ~G~~hiaf~V~di~~~~~~l~~-~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~  146 (149)
T d1sqia1          84 DGVKDIAFEVEDCEHIVQKARE-RGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYT  146 (149)
T ss_dssp             SEEEEEEEEEECHHHHHHHHHH-HTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCC
T ss_pred             CeEEEEEEEeccHHHHHHHHHH-CCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCc
Confidence            5789999999999999999987 8987664321   1111122334443 67788888876543

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=92.45  E-value=0.33  Score=30.15  Aligned_cols=52  Identities=12%  Similarity=0.111  Sum_probs=36.6

Q ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCeEeccC-----CCceEEEEEcCCCCeEEEEee
Q 031406          107 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK-----SGRPAIFTRDPDANALEFTQV  158 (160)
Q Consensus       107 ~~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~-----~g~~~~~~~DPdG~~ie~~~~  158 (160)
                      .++.|++|.|.|++++.+...+ .|.+.....     ......++....+..+++.+.
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~   63 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSV   63 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEE
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEecc
Confidence            3479999999999999999986 799876421     123344555555666777664

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=91.77  E-value=0.27  Score=29.40  Aligned_cols=48  Identities=19%  Similarity=0.174  Sum_probs=33.3

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEE-cCCCCeEEEEe
Q 031406          108 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTR-DPDANALEFTQ  157 (160)
Q Consensus       108 ~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~-DPdG~~ie~~~  157 (160)
                      ++.|+++.|.|++++.+...+ .|.++....++  .++++ |-..+.+.+.+
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~~--~~~l~~~~~~~~l~l~~   53 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN--GDLFRIDSRAWRIAVQQ   53 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT--EEEEESSSBSCSEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecCCc--ceEEeecCCceEEEEec
Confidence            368999999999999999988 59988765433  23343 33334555544

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=91.61  E-value=0.24  Score=29.22  Aligned_cols=48  Identities=13%  Similarity=0.117  Sum_probs=33.0

Q ss_pred             ceEEEEEeCCHHHHHHHHHHCCCeEeccCCCceEEEEEcCCCCeEEEE
Q 031406          109 DRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  156 (160)
Q Consensus       109 ~~hi~f~v~d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~ie~~  156 (160)
                      +.|+++.|.|+++..+...+.|..+...........+.-.++..+.+.
T Consensus         3 i~hv~l~V~D~~~s~~FY~~Lg~~~~~~~~~~~~~~~~~~~~~~~~~~   50 (128)
T d1klla_           3 ISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAWD   50 (128)
T ss_dssp             CCEEEEEESCHHHHHHHHHHTTCCCCTTGGGCSEEEEECGGGCEEEEE
T ss_pred             EeEEEEEcCCHHHHHHHHHHhCCccccccccccceeeeccceeeeeec
Confidence            689999999999999888888887765443233344444445555443

>d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase Atu2258
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=90.58  E-value=0.36  Score=29.23  Aligned_cols=41  Identities=17%  Similarity=0.079  Sum_probs=27.7

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEE
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWL   81 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~   81 (160)
                      ++.++.+.+.|. .+..||++ +||+.....+..+.+...+++
T Consensus        93 g~~~i~l~~~n~-~a~~fY~k-~GF~~~g~~~~~~~~~~~~~m  133 (137)
T d2g3aa1          93 GCMGAYIDTMNP-DALRTYER-YGFTKIGSLGPLSSGQSITWL  133 (137)
T ss_dssp             TCCEEEEEESCH-HHHHHHHH-HTCEEEEEECCCTTSCCEEEE
T ss_pred             CCceEEEecccH-hhHHHHHh-CCCEEEEEECCCCCCCcEEEE
Confidence            456777777775 47999987 999998766544433333443

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.42  E-value=1.2  Score=27.57  Aligned_cols=58  Identities=14%  Similarity=0.190  Sum_probs=43.7

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCC
Q 031406           36 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN   95 (160)
Q Consensus        36 ~~~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~   95 (160)
                      ...++.|+++.+.|+++..+.+++ .|.+..... ........+|++- +|..++|++...
T Consensus       113 ~~~g~~h~~~~~~d~~~~~~~l~~-~Gv~~~~~p-~~g~~~~~~f~~DPdG~~IElvq~~~  171 (176)
T d1qipa_         113 DPRGFGHIGIAVPDVYSACKRFEE-LGVKFVKKP-DDGKMKGLAFIQDPDGYWIEILNPNK  171 (176)
T ss_dssp             SSCBEEEEEEECSCHHHHHHHHHH-TTCEEEECT-TSSSSTTCEEEECTTCCEEEEECTTT
T ss_pred             CccceeEEEeeHHHHHHHHHHHHH-CCCEEeeCC-ccCCceEEEEEECCCCCEEEEEeCCC
Confidence            345899999999999999999987 799887643 2333334566654 577999998764

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=90.03  E-value=0.61  Score=27.91  Aligned_cols=56  Identities=9%  Similarity=0.055  Sum_probs=34.0

Q ss_pred             eeeeeEEEEeCCHH---HHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEecCCC
Q 031406           38 VSVHHVGILCENLE---RSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP   96 (160)
Q Consensus        38 ~~i~hv~l~v~D~~---~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~~   96 (160)
                      .+++|+++.|.|.+   +..+...+ .|........  .......++.- +|..++|+...+.
T Consensus        76 ~~~~Hiaf~v~~~~~l~~~~~~l~~-~gv~~~~~~~--~~~~~~~yf~DPdG~~iEl~~~~~~  135 (144)
T d1zswa1          76 NAITRIGLLVPSEDSLHYWKERFEK-FDVKHSEMTT--YANRPALQFEDAEGLRLVLLVSNGE  135 (144)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHHHHH-TTCEECCSEE--ETTEEEEEEECTTCCEEEEEECTTC
T ss_pred             CceeEEEEecCCchhHHHHhhhhhc-cceeeeCccc--cCCeEEEEEECCCCCEEEEEEeCCC
Confidence            36899999999954   44444444 6776543221  12233445554 5779999876553

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=89.81  E-value=0.45  Score=29.87  Aligned_cols=32  Identities=13%  Similarity=0.150  Sum_probs=26.9

Q ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCeEeccCC
Q 031406          107 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKS  138 (160)
Q Consensus       107 ~~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~  138 (160)
                      .+++||++.|.|+++..+.... .|.++....+
T Consensus        11 ~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~   43 (170)
T d1zswa2          11 QGMGSVELTVRRLDKMASTLTEIFGYTEVSRND   43 (170)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS
T ss_pred             CCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC
Confidence            4589999999999999988888 6998876543

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=87.72  E-value=0.88  Score=26.99  Aligned_cols=31  Identities=26%  Similarity=0.244  Sum_probs=26.2

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-CCCeEeccCC
Q 031406          108 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKS  138 (160)
Q Consensus       108 ~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~  138 (160)
                      ++.||++.|.|++++.+...+ .|.++.....
T Consensus         4 ~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~   35 (132)
T d1kw3b1           4 RLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG   35 (132)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET
T ss_pred             cccEEEEEeCCHHHHHHHHHHHhCCceecccc
Confidence            478999999999999999988 5999876543

>d1y9wa1 d.108.1.1 (A:1-140) Probable acetyltransferase BC2806 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase BC2806
species: Bacillus cereus [TaxId: 1396]

Probab=86.60  E-value=0.4  Score=28.95  Aligned_cols=40  Identities=10%  Similarity=0.089  Sum_probs=26.6

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEE
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAW   80 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~   80 (160)
                      +...+.+.+.|. .|..||++ +||+.....+....+...+|
T Consensus        96 g~~~i~l~~~n~-~A~~fY~k-~GF~~~g~~~~~~~~~~~~~  135 (140)
T d1y9wa1          96 GCRLILLDSFSF-QAPEFYKK-HGYREYGVVEDHPKGHSQHF  135 (140)
T ss_dssp             TCCEEEEEEEGG-GCHHHHHH-TTCEEEEEESSCSTTCCEEE
T ss_pred             cceEEEEeechh-hHHHHHHh-CCCEEEEEECCCCCCCcEEE
Confidence            456667777664 58999987 89999876554333333333

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=86.27  E-value=1.2  Score=27.96  Aligned_cols=49  Identities=14%  Similarity=0.086  Sum_probs=32.7

Q ss_pred             ceEEEEEeCCHHHHHHHHHHCCCeEecc---CCCceEEEEE--cCCCCeEEEEe
Q 031406          109 DRHTCIAIRDVSKLKMILDKAGISYTLS---KSGRPAIFTR--DPDANALEFTQ  157 (160)
Q Consensus       109 ~~hi~f~v~d~~~~~~~l~~~G~~~~~~---~~g~~~~~~~--DPdG~~ie~~~  157 (160)
                      +.|+++.|.|+++..+.....|.++...   ..+...+.+.  +...+.+.+..
T Consensus         6 l~Hv~l~v~Dle~s~~FYe~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~   59 (176)
T d1f1ua2           6 LDHFNQVTPDVPRGRAYLEDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTG   59 (176)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEE
T ss_pred             eeeEEEEcCCHHHHHHHHHHCCCEEEEEEecCCcceeeeeeccCccccceeccc
Confidence            6899999999999988888899998642   2333333333  33445555443

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=86.15  E-value=1.2  Score=25.52  Aligned_cols=51  Identities=8%  Similarity=0.132  Sum_probs=34.4

Q ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEEEe
Q 031406           41 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME   92 (160)
Q Consensus        41 ~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~   92 (160)
                      .++.+.|.|++++.+-+.+ .|.++.......+.+.+..++.. +|..+++++
T Consensus        62 ~~~~f~v~D~d~~~~~l~~-~G~~i~~~~~~~~~g~~~~~~~DPdGn~ie~~~  113 (115)
T d2i7ra1          62 IIIHIEVEDVDQNYKRLNE-LGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYR  113 (115)
T ss_dssp             EEEEEECSCHHHHHHHHHH-HTCCEEEEEEECTTSCEEEEEECGGGCEEEEEE
T ss_pred             eEEEEEECCHHHHHHHHHh-hccccccceEEeeCCeEEEEEECCCCCEEEEEE
Confidence            3688999999999999887 79877653322333444555554 455677765

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=83.12  E-value=1.7  Score=25.79  Aligned_cols=29  Identities=17%  Similarity=0.082  Sum_probs=24.9

Q ss_pred             ceEEEEEeCCHHHHHHHHHH-CCCeEeccC
Q 031406          109 DRHTCIAIRDVSKLKMILDK-AGISYTLSK  137 (160)
Q Consensus       109 ~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~  137 (160)
                      +.||++.|+|+++..+...+ .|..+....
T Consensus         8 l~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~   37 (145)
T d1mpya1           8 PGHVQLRVLDMSKALEHYVELLGLIEMDRD   37 (145)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEC
T ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCEEEEee
Confidence            68999999999999998876 799887654

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=82.64  E-value=0.62  Score=30.36  Aligned_cols=29  Identities=17%  Similarity=0.480  Sum_probs=25.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhcCCEEee
Q 031406           38 VSVHHVGILCENLERSLEFYQNILGLEINE   67 (160)
Q Consensus        38 ~~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~   67 (160)
                      .++.||++.|+|+.+|.+.+++ -|++...
T Consensus        83 ~GiqHIAf~vdDI~aav~~L~~-~Gv~fL~  111 (203)
T d1cjxa2          83 EGIQHVAFLTDDLVKTWDALKK-IGMRFMT  111 (203)
T ss_dssp             SBCCEEEEEESCHHHHHHHHHH-TTCCBCC
T ss_pred             CCCceEEEEeCCHHHHHHHHHh-cCCcccc
Confidence            4799999999999999999987 7887654

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=82.49  E-value=1.5  Score=26.30  Aligned_cols=32  Identities=19%  Similarity=0.151  Sum_probs=26.3

Q ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCeEeccCC
Q 031406          107 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKS  138 (160)
Q Consensus       107 ~~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~  138 (160)
                      .++.|+.+.|.|+++..+...+ .|.++.....
T Consensus        15 ~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~   47 (146)
T d1f1ua1          15 VRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE   47 (146)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS
T ss_pred             cEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC
Confidence            3478999999999999998875 7999876543

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=81.84  E-value=2.2  Score=23.74  Aligned_cols=51  Identities=16%  Similarity=0.184  Sum_probs=32.8

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeeecCCCCCCcceEEEEe-CCcEEEE
Q 031406           39 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHL   90 (160)
Q Consensus        39 ~i~hv~l~v~D~~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~-g~~~~~l   90 (160)
                      ...|+.+.+.|+++..+-.++ .|.+..........+.+..++.. +|..+++
T Consensus        59 ~~~~~~~~~~dvd~~~~~l~~-~g~~~~~~p~~~~~g~~~~~~~DP~Gn~iei  110 (111)
T d2pjsa1          59 DVPDLSIEVDNFDEVHARILK-AGLPIEYGPVTEAWGVQRLFLRDPFGKLINI  110 (111)
T ss_dssp             CCCSEEEEESCHHHHHHHHHH-TTCCCSEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred             ceeEEEEEecCHHHHHHHHHh-hccccccCCeEcCCCcEEEEEECCCCCEEEe
Confidence            456899999999999998876 79876543222233334445554 3445554

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=81.53  E-value=2.7  Score=24.69  Aligned_cols=30  Identities=17%  Similarity=0.227  Sum_probs=25.5

Q ss_pred             CceEEEEEeCCHHHHHHHHHH-CCCeEeccC
Q 031406          108 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK  137 (160)
Q Consensus       108 ~~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~  137 (160)
                      ++.||++.|.|++++.+...+ .|.++....
T Consensus         4 ~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~   34 (140)
T d1npba_           4 SLNHLTLAVSDLQKSVTFWHELLGLTLHARW   34 (140)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTSCCEEEEEE
T ss_pred             cEeEEEEEeCCHHHHHHHHHHHhCCEEEEEe
Confidence            479999999999999998877 799886543