Citrus Sinensis ID: 031416

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Protein Sequence
MGFLCIIFLLLVSSGARGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFSIESYDLKYKPTITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIASADFPVSSFAERPTCGCGFDCFTATANNLRFTPNVLSSIS
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHcccccccccHHHHHHHccccccccccccEEEEEEccccEEEEEEcccEEEEEccEEEEEccEEEEEEEcccEEccccEEEEEEEEEEEEEEEEEcccEEEEEEEEEEEEccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHccccccccccHHHHHHHccccccccccccEEEEEcccccEEEEEEcccEEEEEccEEEEEEcEEEEEEEcccEccccEEEEEEEEEEEEEEEEcccccEEEEEEEEEEccccHHHcccccccccccccccHHHHHHcccccEccccc
Coil and Loop (DISEMBL)
MGFLCIIFLLLVssgargdnseTAYEVLQEydfpigllpksvlgytidrttgKFSVYLEdtcsfsiesydlkykptitgvitkgkisdlsGISVKVLILWLNIVEVTRQGDELMLSVGiasadfpvssfaerptcgcgfdcftatannlrftpnvlssis
Flexible Loop (DISEMBL)
MGFLCIIFLLLVSSGARGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFSIESYDLKYKPTITGVItkgkisdlsGISVKVLILWLNIVEVTRQGDELMLSVGIASADFPVSSFAERPTCGCGFDCFTATAnnlrftpnvlssis
Low Complexity Region (SEG)
MGFLCIIFLLLVSSGARGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFSIESYDLKYKPTITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIASADFPVSSFAERPTCGCGFDCFTATANNLRFTPNVLSSIS
Disordered region (IsUnstruct)
**FLCIIFLLLVSSGARGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFSIESYDLKYKPTITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIASADFPVSSFAERPTCGCGFDCFTATANNLRFTPN******
Disordered Region (DISOPRED)
MGFLCIIFLLLV*************EVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFSIESYDLKYKPTITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIASADFPVSSFAERPTCGCG***************N******
Disordered Region (DISEMBL)
MGFLCIIFLLLVSSGARGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFSIESYDLKYKPTITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIASADFPVSSFAERPTCGCGFDCFTATANNLRFTPNVLSSIS
Disordered Region (DISPRO)
MGFLCIIFLLLVSSGARGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFSIESYDLKYKPTITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIASADFPVSSFAERPTCGCGFDCFTATANNL***********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGFLCIIFLLLVSSGARGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFSIESYDLKYKPTITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIASADFPVSSFAERPTCGCGFDCFTATANNLRFTPNVLSSIS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	160	2.2.26 [Sep-21-2011]
Q9M015	170	Uncharacterized protein A	no	no	0.656	0.617	0.308	2e-10

>sp|Q9M015|Y5161_ARATH Uncharacterized protein At5g01610 OS=Arabidopsis thaliana GN=At5g01610 PE=1 SV=1

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 2/107 (1%)

Query: 17  RGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFSI-ESYDLKYKP 75
           +G   +   E+L+EYD PIG+ P     Y  D  T K +V +   C     +S  LK+  
Sbjct: 47  KGKMQKPLPELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTT 106

Query: 76  TITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIASA 122
           T+TG + KGK++D+ GI  KV+I W+ +  ++    ++  + G+  +
Sbjct: 107 TVTGHLEKGKLTDVEGIKTKVMI-WVKVTSISTDASKVYFTAGMKKS 152

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	160
224128452	161	predicted protein [Populus trichocarpa]	0.85	0.844	0.647	8e-44
225437416	162	PREDICTED: uncharacterized protein LOC10	0.95	0.938	0.567	5e-43
147795023	162	hypothetical protein VITISV_014708 [Viti	0.95	0.938	0.561	2e-42
255564212	161	conserved hypothetical protein [Ricinus	0.987	0.981	0.565	3e-42
351724809	159	uncharacterized protein LOC100500182 pre	0.906	0.911	0.568	3e-42
351725984	160	uncharacterized protein LOC100500410 pre	0.906	0.906	0.561	2e-41
255542778	173	conserved hypothetical protein [Ricinus	0.862	0.797	0.585	5e-40
351724967	152	uncharacterized protein LOC100500136 pre	0.875	0.921	0.551	2e-39
225450691	170	PREDICTED: uncharacterized protein LOC10	0.956	0.9	0.516	2e-38
388522893	163	unknown [Lotus japonicus]	0.85	0.834	0.553	3e-38

>gi|224128452|ref|XP_002320335.1| predicted protein [Populus trichocarpa] gi|222861108|gb|EEE98650.1| predicted protein [Populus trichocarpa]

 Score =  181 bits (460), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 102/136 (75%)

Query: 6   IIFLLLVSSGARGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFS 65
           ++  L  SS    D++ T YEVLQEYDFPIGLLP  V  Y  D +TGKF+V+L  TCSF 
Sbjct: 9   LVLALSASSLVNADDTSTVYEVLQEYDFPIGLLPAGVTSYEFDNSTGKFTVHLNGTCSFK 68

Query: 66  IESYDLKYKPTITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIASADFP 125
           I+SY+LKYK T+ GVI K K+S LSGI VKVL LWL+IVEVTR  DEL  SVGIASA+FP
Sbjct: 69  IDSYELKYKSTVKGVIAKDKLSKLSGIQVKVLFLWLSIVEVTRDEDELEFSVGIASANFP 128

Query: 126 VSSFAERPTCGCGFDC 141
           VS+F E P CGCGFDC
Sbjct: 129 VSNFVECPICGCGFDC 144

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225437416|ref|XP_002271045.1| PREDICTED: uncharacterized protein LOC100265898 [Vitis vinifera]

 Score =  178 bits (452), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 88/155 (56%), Positives = 110/155 (70%), Gaps = 3/155 (1%)

Query: 4   LCIIFLLLVSSGARGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCS 63
           LC+IFL  + +    D+S TAYE+LQ Y+FP+GLLPK  LGY +D+ TGKF+ Y   +C 
Sbjct: 9   LCVIFLSSIVTA--DDDSPTAYEILQSYNFPMGLLPKGALGYDLDKDTGKFNAYFNGSCG 66

Query: 64  FSIE-SYDLKYKPTITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIASA 122
           FS+E SY LKYK TI+G I++ K++ LSGISVKVL LWLNIVEVTR GD++  SVGIASA
Sbjct: 67  FSLEGSYQLKYKSTISGYISQNKLTKLSGISVKVLFLWLNIVEVTRNGDDMEFSVGIASA 126

Query: 123 DFPVSSFAERPTCGCGFDCFTATANNLRFTPNVLS 157
            FP+ +F E P CGCG DC       L+  P V S
Sbjct: 127 AFPIDNFFECPQCGCGLDCVNGQVRKLKTNPFVSS 161

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147795023|emb|CAN69598.1| hypothetical protein VITISV_014708 [Vitis vinifera]

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 87/155 (56%), Positives = 109/155 (70%), Gaps = 3/155 (1%)

Query: 4   LCIIFLLLVSSGARGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCS 63
           LC+IFL  + +    D+S TAYE+LQ Y+FP+GLLPK  LGY +D+ TGKF+ Y   +C 
Sbjct: 9   LCVIFLSSIVTA--DDDSPTAYEILQSYNFPMGLLPKGALGYDLDKDTGKFNAYFNGSCG 66

Query: 64  FSIE-SYDLKYKPTITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIASA 122
           FS+E SY LKYK TI+G I++ K++ LSG SVKVL LWLNIVEVTR GD++  SVGIASA
Sbjct: 67  FSLEGSYQLKYKSTISGYISQNKLTKLSGXSVKVLFLWLNIVEVTRNGDDMEFSVGIASA 126

Query: 123 DFPVSSFAERPTCGCGFDCFTATANNLRFTPNVLS 157
            FP+ +F E P CGCG DC       L+  P V S
Sbjct: 127 AFPIDNFFECPQCGCGLDCVNGQVRKLKTNPFVSS 161

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255564212|ref|XP_002523103.1| conserved hypothetical protein [Ricinus communis] gi|223537665|gb|EEF39288.1| conserved hypothetical protein [Ricinus communis]

 Score =  176 bits (446), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 91/161 (56%), Positives = 110/161 (68%), Gaps = 3/161 (1%)

Query: 1   MGFLCIIFLLLVSSGA---RGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVY 57
           M  L  IFL L+SS       + + T YEVLQ+YDFPIGLLPK V  Y ++ +TGKFS+ 
Sbjct: 1   MSILSAIFLFLISSIHPIFAANTNSTVYEVLQDYDFPIGLLPKGVTSYELNTSTGKFSLR 60

Query: 58  LEDTCSFSIESYDLKYKPTITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSV 117
           L +TC+F IESY LKYK  ITGVI K K+S LSGI VKVL+ WL+I EV R  DEL  SV
Sbjct: 61  LNETCTFKIESYVLKYKSKITGVIEKDKLSSLSGIQVKVLLFWLSITEVIRNDDELEFSV 120

Query: 118 GIASADFPVSSFAERPTCGCGFDCFTATANNLRFTPNVLSS 158
           GIASA+FP+ +F E PTCGCGFDC    +  ++    V SS
Sbjct: 121 GIASANFPIGNFDECPTCGCGFDCDDVNSREIKINRLVSSS 161

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724809|ref|NP_001238094.1| uncharacterized protein LOC100500182 precursor [Glycine max] gi|255629593|gb|ACU15144.1| unknown [Glycine max]

 Score =  176 bits (446), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 83/146 (56%), Positives = 111/146 (76%), Gaps = 1/146 (0%)

Query: 3   FLCIIFLLLVSSGARGDNSE-TAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDT 61
           FL I+ + L +S A     + +AY+VL EY FP+GLLPK  +GY+++R +G+F+VY +  
Sbjct: 6   FLWILMVSLTASCALSQPQKLSAYDVLMEYGFPVGLLPKGAIGYSLNRDSGEFAVYFQGA 65

Query: 62  CSFSIESYDLKYKPTITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIAS 121
           CSF IESY LKYK TITGVI+KG++ +L G++VK+L+LWLNIVEV+RQG+++  SVGIAS
Sbjct: 66  CSFDIESYTLKYKSTITGVISKGRLYNLKGVTVKILLLWLNIVEVSRQGNDIYFSVGIAS 125

Query: 122 ADFPVSSFAERPTCGCGFDCFTATAN 147
           ADF V +F E P CGCGFDC T   N
Sbjct: 126 ADFGVENFLESPQCGCGFDCKTLPLN 151

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725984|ref|NP_001237623.1| uncharacterized protein LOC100500410 precursor [Glycine max] gi|255630258|gb|ACU15484.1| unknown [Glycine max]

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 82/146 (56%), Positives = 109/146 (74%), Gaps = 1/146 (0%)

Query: 3   FLCIIFLLLVSSGARGDNSE-TAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDT 61
           FL  + + L +S A     + +AY+VL EY FP+GLLPK  +GY+++R +G+F+VY E  
Sbjct: 7   FLWTLVVCLTASCALSQPQKLSAYDVLMEYGFPVGLLPKGAIGYSLNRDSGEFAVYFEGA 66

Query: 62  CSFSIESYDLKYKPTITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIAS 121
           CSF IESY LKYK TITGVI+KG++ +L G++VK+L+LWLNIVEV+RQG+++  S GIAS
Sbjct: 67  CSFDIESYALKYKSTITGVISKGRLYNLKGVTVKILLLWLNIVEVSRQGNDIYFSAGIAS 126

Query: 122 ADFPVSSFAERPTCGCGFDCFTATAN 147
           ADF V +F E P CGCGFDC T   N
Sbjct: 127 ADFGVENFLESPQCGCGFDCKTLPLN 152

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542778|ref|XP_002512452.1| conserved hypothetical protein [Ricinus communis] gi|255591191|ref|XP_002535460.1| conserved hypothetical protein [Ricinus communis] gi|223523035|gb|EEF26923.1| conserved hypothetical protein [Ricinus communis] gi|223548413|gb|EEF49904.1| conserved hypothetical protein [Ricinus communis]

 Score =  169 bits (427), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 82/140 (58%), Positives = 104/140 (74%), Gaps = 2/140 (1%)

Query: 4   LCIIFLLLVSSGARGDNSE-TAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTC 62
           LCI+ L   S  A+  N E TAYE+L +Y+FP GLLPK V+GY +D T+GKFS +L  TC
Sbjct: 16  LCIVLLFSSSWLAKSVNEEPTAYEILSDYNFPKGLLPKGVIGYDLDTTSGKFSAFLNGTC 75

Query: 63  SFSIE-SYDLKYKPTITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIAS 121
           SFS+E SY L+YK TI G I+KGK+S L G+SVK+L +W++IVEV+R GD+L  SVGIA 
Sbjct: 76  SFSLEGSYQLRYKSTIRGHISKGKLSSLQGVSVKLLFMWVDIVEVSRSGDDLEFSVGIAG 135

Query: 122 ADFPVSSFAERPTCGCGFDC 141
           A FP+ +F E P CGCG DC
Sbjct: 136 AGFPIDNFEESPQCGCGLDC 155

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724967|ref|NP_001237332.1| uncharacterized protein LOC100500136 precursor [Glycine max] gi|255629426|gb|ACU15059.1| unknown [Glycine max]

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 80/145 (55%), Positives = 100/145 (68%), Gaps = 5/145 (3%)

Query: 3   FLCIIFLLLVSSGARGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTC 62
           FLCI+  L V +        +AY+VL++YD P+GLLPK   GY ++   G F+ YL  TC
Sbjct: 7   FLCILVYLNVVAAEL-----SAYDVLEKYDLPVGLLPKGATGYELNEKNGHFTAYLNGTC 61

Query: 63  SFSIESYDLKYKPTITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIASA 122
            FSIESY+LKYK TI GVI+KGK+S L G+SVK+ +LWL IVE+TR GD+L  SVG+ASA
Sbjct: 62  YFSIESYELKYKSTIKGVISKGKLSKLKGVSVKIEVLWLKIVELTRDGDDLQFSVGVASA 121

Query: 123 DFPVSSFAERPTCGCGFDCFTATAN 147
            F V SF+E P CGCGF C     N
Sbjct: 122 GFSVDSFSESPQCGCGFACDNFNQN 146

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225450691|ref|XP_002283241.1| PREDICTED: uncharacterized protein LOC100263080 [Vitis vinifera] gi|296089728|emb|CBI39547.3| unnamed protein product [Vitis vinifera]

 Score =  163 bits (413), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 80/155 (51%), Positives = 108/155 (69%), Gaps = 2/155 (1%)

Query: 4   LCIIFLLLVSSGARGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCS 63
           LC+I L+  +  +  ++S T YEVLQ+Y+FP+GLLPK V+GY ++ +TGKFS     +CS
Sbjct: 16  LCLI-LIHSTPASSSNDSPTVYEVLQDYNFPVGLLPKGVIGYDLNTSTGKFSASFNGSCS 74

Query: 64  FSIE-SYDLKYKPTITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIASA 122
           FS+E SY LKYK TI G I+KGK+S L G+SVK+  +W++I+EV R GD++  SVGIASA
Sbjct: 75  FSLEGSYQLKYKSTIKGNISKGKLSSLEGVSVKLFFIWVDIIEVRRSGDDIDFSVGIASA 134

Query: 123 DFPVSSFAERPTCGCGFDCFTATANNLRFTPNVLS 157
            F + +F E P CGCG +C     N LR  P V S
Sbjct: 135 GFSIDNFEECPQCGCGLNCGNRQVNKLRSNPFVSS 169

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388522893|gb|AFK49508.1| unknown [Lotus japonicus]

 Score =  163 bits (412), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 78/141 (55%), Positives = 104/141 (73%), Gaps = 5/141 (3%)

Query: 19  DNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFSIESYDLKYKPTIT 78
           +N  TAY+V+QEY FP+GLLP   LGY+++R TG+F+VY + +C+F+IESY L YK TIT
Sbjct: 28  ENKLTAYDVMQEYGFPVGLLPIGALGYSLNRQTGEFAVYFDGSCNFNIESYRLSYKRTIT 87

Query: 79  GVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIASADFPVSSFAERPTCGCG 138
           GVIT G++  L G+SV+VL+LWL+IVEV  +G ++  SVGIASA+F V +F E P CGCG
Sbjct: 88  GVITNGRLYKLKGVSVRVLLLWLDIVEVKIRGGDVEFSVGIASANFGVDNFYESPQCGCG 147

Query: 139 FDCFTATANNLRFTPNVLSSI 159
           FDC     NNL     + +SI
Sbjct: 148 FDC-----NNLLLNGELSASI 163

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	160
TAIR|locus:505006096	166	AT1G02816 "AT1G02816" [Arabido	0.887	0.855	0.534	3e-37
TAIR|locus:2133264	167	AT4G02370 "AT4G02370" [Arabido	0.912	0.874	0.506	1e-36
TAIR|locus:2133254	154	AT4G02360 "AT4G02360" [Arabido	0.85	0.883	0.514	3.1e-35
TAIR|locus:505006095	149	AT1G02813 [Arabidopsis thalian	0.856	0.919	0.482	3.2e-33
TAIR|locus:2079601	169	AT3G07470 [Arabidopsis thalian	0.812	0.769	0.364	2e-17
TAIR|locus:2079701	271	AT3G07460 "AT3G07460" [Arabido	0.793	0.468	0.358	9.8e-16
TAIR|locus:2183134	151	AT5G19590 "AT5G19590" [Arabido	0.7	0.741	0.350	8.8e-15
TAIR|locus:2147610	181	AT5G19860 "AT5G19860" [Arabido	0.718	0.635	0.325	2.1e-13
TAIR|locus:2166178	170	AT5G37070 "AT5G37070" [Arabido	0.768	0.723	0.275	3.4e-13
TAIR|locus:2149770	170	AT5G01610 "AT5G01610" [Arabido	0.637	0.6	0.317	5.6e-13

TAIR|locus:505006096 AT1G02816 "AT1G02816" [Arabidopsis thaliana (taxid:3702)]

 Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
 Identities = 77/144 (53%), Positives = 102/144 (70%)

Query:     3 FLCIIFLLLVSSGARGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTC 62
             FL  I   L+++ A  D+  TAY +LQ Y+FP+G+LPK V+ Y +D++TG+F  Y   +C
Sbjct:    12 FLFCIPSPLIAA-ANDDDIPTAYTLLQSYNFPVGILPKGVVSYDLDKSTGQFHAYFNKSC 70

Query:    63 SFSIE-SYDLKYKPTITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIAS 121
             SF+++ SY L YK TI+G I++ KI+ L+G+ VKVL LWLNIVEV R GDEL  SVGI S
Sbjct:    71 SFALQGSYQLDYKSTISGYISENKITKLTGVKVKVLFLWLNIVEVIRNGDELEFSVGITS 130

Query:   122 ADFPVSSFAERPTCGCGFDCFTAT 145
             A+F +  F E P CGCGFDC T T
Sbjct:   131 ANFEIDEFYESPQCGCGFDCKTKT 154

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

TAIR|locus:2133264 AT4G02370 "AT4G02370" [Arabidopsis thaliana (taxid:3702)]

 Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 75/148 (50%), Positives = 100/148 (67%)

Query:    12 VSSGARGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFS-IESYD 70
             V + A  D + TAY +LQ Y+FP+G+LPK V+ Y +D TTGKF  Y  D+CSF+ + SY 
Sbjct:    21 VVTAAESD-TPTAYSLLQSYNFPVGILPKGVVAYDLDTTTGKFHAYFNDSCSFNLVGSYQ 79

Query:    71 LKYKPTITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIASADFPVSSFA 130
             L YK TI+G I++ K+  L+G+ VKVL LWLNIVEV R GDE+  SVGI SA+F +  F 
Sbjct:    80 LNYKSTISGYISENKLKKLTGVKVKVLFLWLNIVEVIRNGDEMEFSVGITSANFAIQEFL 139

Query:   131 ERPTCGCGFDCFTATANNLRFTPNVLSS 158
             E P CGCGF+C  +  + +   P + SS
Sbjct:   140 ESPQCGCGFECKDSKLDMIERIPFLSSS 167

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2133254 AT4G02360 "AT4G02360" [Arabidopsis thaliana (taxid:3702)]

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 70/136 (51%), Positives = 91/136 (66%)

Query:     6 IIFLLLVSSGARGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFS 65
             + FL    S A      TAY+ ++ Y+ P G+LPK V+ Y ++  TG F VY  DTC F+
Sbjct:    11 VFFLFFTVSFAVSGQKPTAYDAVKLYNLPPGILPKGVVDYELNPKTGNFKVYFNDTCEFT 70

Query:    66 IESYDLKYKPTITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIASADFP 125
             I+SY LKYK TI+GVI+ G + +L G+SVKVL  W+NI EV+  G +L  SVGIASA FP
Sbjct:    71 IQSYQLKYKSTISGVISPGHVKNLKGVSVKVLFFWVNIAEVSLDGADLDFSVGIASASFP 130

Query:   126 VSSFAERPTCGCGFDC 141
              ++F E P CGCGFDC
Sbjct:   131 AANFEESPQCGCGFDC 146

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:505006095 AT1G02813 [Arabidopsis thaliana (taxid:3702)]

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 67/139 (48%), Positives = 92/139 (66%)

Query:     6 IIFLLLVSSGAR--GDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCS 63
             IIFLLL+S+     G    + Y+VL+ Y  P G+LP+ V  Y ++R TG F V    TC 
Sbjct:     5 IIFLLLLSTSVSVSGQKKRSVYQVLENYTLPRGILPEGVHDYDLNRRTGVFKVRFNTTCQ 64

Query:    64 FSIESYDLKYKPTITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIASAD 123
             FSI+SY +KYKP I+G+IT+G++  L G+SVKVL  W+NI EV+R GD++   VG AS +
Sbjct:    65 FSIDSYKVKYKPVISGIITRGRVIRLIGVSVKVLFFWINISEVSRDGDDVEFFVGAASEE 124

Query:   124 FPVSSFAERPTCGCGFDCF 142
             F    F + P CGCGF+C+
Sbjct:   125 FSSKYFVDSPKCGCGFNCY 143

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010584 "pollen exine formation" evidence=RCA

TAIR|locus:2079601 AT3G07470 [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 50/137 (36%), Positives = 71/137 (51%)

Query:     1 MGFLCIIFLLLVSSGARGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLED 60
             + FLC++ +  +S       +ET YE+L     P G+ PK V  +T D  TG+FSVYL  
Sbjct:     8 IAFLCLVLVAGISISTAISETETIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLNQ 67

Query:    61 TCSFSIESYDLKYKPTITGVITKGKISDLSGISVKVLILWLNI----VEVTRQGDELMLS 116
              C    E+ ++ Y   ITG I   +ISDLSGIS + L LW  +    V+V   G  +   
Sbjct:    68 ACEAKYET-EIHYDANITGTIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSG-LIYFD 125

Query:   117 VGIASADFPVSSFAERP 133
             VG+    + +S F E P
Sbjct:   126 VGVVRKQYSLSLF-ETP 141

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2079701 AT3G07460 "AT3G07460" [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
 Identities = 48/134 (35%), Positives = 71/134 (52%)

Query:     4 LCIIFLLLVSSGARGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCS 63
             LC +    +S  A    +E+  E+L     P+GL PK V G+T++  TG+FSVYL  +C 
Sbjct:    10 LCFVLAAGISISAVIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQ 69

Query:    64 FSIESYDLKYKPTITGVITKGKISDLSGISVKVLILWLNI----VEVTRQGDELMLSVGI 119
                E+ +L Y   ++G I   +I DLSGIS + L LWL +    V+V   G  +   VG+
Sbjct:    70 AKYET-ELHYDEIVSGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSG-LIFFDVGV 127

Query:   120 ASADFPVSSFAERP 133
                 + +S F E P
Sbjct:   128 LRKQYSLSLF-ETP 140

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2183134 AT5G19590 "AT5G19590" [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
 Identities = 40/114 (35%), Positives = 64/114 (56%)

Query:    24 AYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFSI--ESYDLKYKPTITGVI 81
             A+  L  + FPIGLLP SV  Y +++T+G FS++L   C  ++  ++Y   Y   +TG I
Sbjct:    31 AHAELTNHGFPIGLLPLSVKDYFLNQTSGDFSLFLNGACKITLPPDNYIATYSNKVTGRI 90

Query:    82 TKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIASADFPVSSFAERPTC 135
             ++GKI++L GI V+      +I  +   GD L+  V   +A +P  +F E   C
Sbjct:    91 SQGKIAELQGIRVRAFFKSWSITGIRSSGDNLVFEVAGITAKYPSKNFDESLDC 144

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

GO:0016558 "protein import into peroxisome matrix" evidence=RCA

TAIR|locus:2147610 AT5G19860 "AT5G19860" [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 39/120 (32%), Positives = 62/120 (51%)

Query:    19 DNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFSIESYDLKYKPTIT 78
             D+  T YE+L +Y  P GLLP +V  +T+    G+F V+L ++C    + Y + Y  TI+
Sbjct:    31 DSISTVYELLPKYGLPSGLLPDTVTDFTLS-DDGRFVVHLPNSCEIEFD-YLVHYDKTIS 88

Query:    79 GVITKGKISDLSGISVKVLILWLNIVEVTRQ---GDELMLSVGIASADFPVSSFAERPTC 135
             G I  G I++L GI VK   +WL++ E+       D +   VG  +    +  F    +C
Sbjct:    89 GRIGYGSITELKGIQVKKFFIWLDVDEIKVDLPPSDSIYFKVGFINKKLDIDQFKTIHSC 148

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2166178 AT5G37070 "AT5G37070" [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 35/127 (27%), Positives = 68/127 (53%)

Query:    17 RGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFSI-ESYDLKYKP 75
             +G   +   E+L+E+  P+G+ P+    Y  +  TGK +V++ +TC     +S  L++  
Sbjct:    47 KGKMQKPLPELLKEFGLPVGIFPQDATNYEFNEETGKLTVFIPETCEVGYRDSSVLRFST 106

Query:    76 TITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIASADFPVSSFAERPTC 135
             T+TG + KGK++++ G+  KV+I W+ +  ++    ++  + GI  +    +    RP  
Sbjct:   107 TVTGYLEKGKLAEVEGMKTKVMI-WVKVTCISADSSKVYFTAGIKKSRSRDAYEVIRP-- 163

Query:   136 GCGFDCF 142
             G G D F
Sbjct:   164 GVGVDKF 170

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2149770 AT5G01610 "AT5G01610" [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 33/104 (31%), Positives = 56/104 (53%)

Query:    17 RGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFSI-ESYDLKYKP 75
             +G   +   E+L+EYD PIG+ P     Y  D  T K +V +   C     +S  LK+  
Sbjct:    47 KGKMQKPLPELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTT 106

Query:    76 TITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGI 119
             T+TG + KGK++D+ GI  KV+I W+ +  ++    ++  + G+
Sbjct:   107 TVTGHLEKGKLTDVEGIKTKVMI-WVKVTSISTDASKVYFTAGM 149

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00140722 hypothetical protein (161 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	160
pfam04398	108	pfam04398, DUF538, Protein of unknown function, DU	1e-47

>gnl|CDD|218064 pfam04398, DUF538, Protein of unknown function, DUF538

 Score =  149 bits (378), Expect = 1e-47
 Identities = 60/108 (55%), Positives = 78/108 (72%), Gaps = 1/108 (0%)

Query: 23  TAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFSIESYDLKYKPTITGVIT 82
           TAYE+L+EY  P+GLLPK V  YT+D TTGKF VYL  TC F+ E Y ++Y PT+TG I+
Sbjct: 1   TAYELLEEYGLPVGLLPKGVTEYTLDETTGKFWVYLNGTCEFTFEGYSVRYDPTVTGYIS 60

Query: 83  KGKISDLSGISVKVLILWLNIVEVTRQ-GDELMLSVGIASADFPVSSF 129
           KG++S L G+ VKVL LW+ IVE++   GD+L  SVG+ S  FP  +F
Sbjct: 61  KGRLSGLEGVKVKVLFLWVPIVEISVDDGDKLTFSVGVLSKSFPADAF 108

This family consists of several plant proteins of unknown function. Length = 108

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	160
PF04398	110	DUF538: Protein of unknown function, DUF538; Inter	100.0

>PF04398 DUF538: Protein of unknown function, DUF538; InterPro: IPR007493 This family consists of several plant proteins of unknown function

Probab=100.00  E-value=1.1e-47  Score=288.92  Aligned_cols=110  Identities=47%  Similarity=0.850  Sum_probs=85.2

Q ss_pred             cHHHHHhhCCCCCCCCCCCceeeEEecCCCeEEEEecCcEEEEEceEEEEEccEEEEEEecCceecccceeEEEEEEeee
Q 031416           23 TAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFSIESYDLKYKPTITGVITKGKISDLSGISVKVLILWLN  102 (160)
Q Consensus        23 tayelL~~~gLP~GLLP~~V~~y~l~~~tG~f~v~l~~~C~f~~~~~~v~Y~~~ItG~i~~gkI~~L~GVk~K~lf~Wv~  102 (160)
                      ||||+|++||||+||||++|++|+||++||+|||+|+++|+|++++|+|+|+++|||+|++|+|++|+|||+|++|+|++
T Consensus         1 tayelL~~~glP~GLLP~~v~~y~l~~~tG~f~v~l~~~C~~~~~~~~v~Y~~~ItG~i~~g~i~~L~GVk~k~l~~W~~   80 (110)
T PF04398_consen    1 TAYELLEEYGLPRGLLPLGVTEYGLNRDTGFFWVKLKSPCEFRFEGYLVSYDSEITGYIEKGKIKNLTGVKVKELFLWVP   80 (110)
T ss_dssp             --HHHHHHHS-TT-TTTSSS-EEEE-TTT-SEEEE-SS-EEEESTTSEEEE-SEEEEEE-SS-EEEEES-EEE-SSSEES
T ss_pred             CHHHhHHHcCCCCCcCCCCceEEEEecCCcEEEEEecCCEEEEEEEEEEEEcCeEEEEECCCcCccccCEEEEEEEEEee
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEEEeCCeEEEEEceeeeeeecCcccCC
Q 031416          103 IVEVTRQGDELMLSVGIASADFPVSSFAER  132 (160)
Q Consensus       103 V~eI~~~~~~I~F~vG~~sksFP~s~F~~~  132 (160)
                      |+||.+++|+|+|++|+++++||+++|++|
T Consensus        81 v~~i~~~~~~i~F~~g~~s~sfp~~~F~~s  110 (110)
T PF04398_consen   81 VTEISVDGDKIYFKVGGISKSFPVSAFEES  110 (110)
T ss_dssp             ---BEE-SSSEE-TTSSSS----TTTTSS-
T ss_pred             EEEEEEcCCEEEEEEeeEeccCCHHHhccC
Confidence            999999999999999999999999999986

; PDB: 1YDU_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	160
1ydu_A	170	Solution Nmr Structure Of At5g01610, An Arabidopsis		2e-11

>pdb|1YDU|A Chain A, Solution Nmr Structure Of At5g01610, An Arabidopsis Thaliana Protein Containing Duf538 Domain Length = 170

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 26  EVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFSI-ESYDLKYKPTITGVITKG 84
           E+L+EYD PIG+ P     Y  D  T K +V +   C     +S  LK+  T+TG + KG
Sbjct: 56  ELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKG 115
Query: 85  KISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIASA 122
           K++D+ GI  KV+I W+ +  ++    ++  + G+  +
Sbjct: 116 KLTDVEGIKTKVMI-WVKVTSISTDASKVYFTAGMKKS 152

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	160
1ydu_A	170	AT5G01610; DUF538, structural genomics, protein st	3e-45

>1ydu_A AT5G01610; DUF538, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG unknown function; NMR {Arabidopsis thaliana} SCOP: b.162.1.1 Length = 170

 Score =  145 bits (367), Expect = 3e-45
 Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 4/128 (3%)

Query: 16  ARGDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFSIE-SYDLKYK 74
            +G   +   E+L+EYD PIG+ P     Y  D  T K +V +   C    + S  LK+ 
Sbjct: 46  IKGKMQKPLPELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFT 105

Query: 75  PTITGVITKGKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIASADFPVSSFAERPT 134
            T+TG + KGK++D+ GI  KV+ +W+ +  ++    ++  + G+  +     ++     
Sbjct: 106 TTVTGHLEKGKLTDVEGIKTKVM-IWVKVTSISTDASKVYFTAGMKKS-RSRDAY-GVQR 162

Query: 135 CGCGFDCF 142
            G   D F
Sbjct: 163 NGLRVDKF 170

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	160
1ydu_A	170	AT5G01610; DUF538, structural genomics, protein st	100.0

>1ydu_A AT5G01610; DUF538, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG unknown function; NMR {Arabidopsis thaliana} SCOP: b.162.1.1

Probab=100.00  E-value=3.7e-45  Score=292.09  Aligned_cols=118  Identities=27%  Similarity=0.578  Sum_probs=114.2

Q ss_pred             CCCCccHHHHHhhCCCCCCCCCCCceeeEEecCCCeEEEEecCcEEEEEc-eEEEEEccEEEEEEecCceecccceeEEE
Q 031416           18 GDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFSIE-SYDLKYKPTITGVITKGKISDLSGISVKV   96 (160)
Q Consensus        18 ~~~~~tayelL~~~gLP~GLLP~~V~~y~l~~~tG~f~v~l~~~C~f~~~-~~~v~Y~~~ItG~i~~gkI~~L~GVk~K~   96 (160)
                      +.+.++|||+|++||||+||||++|++|+||++||+|||+|+++|+|+++ +|+|+|+++|||+|++|+|++|+|||+|+
T Consensus        48 g~~~~ta~elL~e~gLP~GLLP~~V~~Y~l~~~tG~f~V~l~~~C~~~f~~~~~v~Y~~~VtG~l~~GkI~~L~GVk~K~  127 (170)
T 1ydu_A           48 GKMQKPLPELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKGKLTDVEGIKTKV  127 (170)
T ss_dssp             TTTTSSCHHHHHHHSCTTCTTTSSSCEEEECTTTCSEEEECSSCEEEESTTSSEEEECSEEEEEECSSCEEEEESCEEES
T ss_pred             ccccccHHHHHHHcCCCCCcCCCCCeEEEEECCCcEEEEEeCCCEEEEecCccEEEEcCEEEEEEcCCcCccccCEEEEE
Confidence            57788999999999999999999999999999999999999999999998 79999999999999999999999999999


Q ss_pred             EEEeeeeeEEEEeCCeEEEEEceeeeeeecCcccCCCCCCC
Q 031416           97 LILWLNIVEVTRQGDELMLSVGIASADFPVSSFAERPTCGC  137 (160)
Q Consensus        97 lf~Wv~V~eI~~~~~~I~F~vG~~sksFP~s~F~~~P~C~~  137 (160)
                      | +|++|+||.+++|+|+|++| ++++||+++|+.+|.|..
T Consensus       128 L-lWv~V~eI~v~~~kI~F~vG-i~ksfp~saFe~~~~c~~  166 (170)
T 1ydu_A          128 M-IWVKVTSISTDASKVYFTAG-MKKSRSRDAYGVQRNGLR  166 (170)
T ss_dssp             S-SEESCCCBEECSSSEECTTS-SSSCCCHHHHSSCCCCCC
T ss_pred             E-EEeeEEEEEEeCCEEEEEEc-CcccccHHHhcCCcCCcc
Confidence            9 99999999999999999998 589999999999999985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	160
d1ydua1	169	b.162.1.1 (A:2-170) Hypothetical protein At5g01610	4e-42

>d1ydua1 b.162.1.1 (A:2-170) Hypothetical protein At5g01610 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 169

class: All beta proteins
fold: At5g01610-like
superfamily: At5g01610-like
family: At5g01610-like
domain: Hypothetical protein At5g01610
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  135 bits (343), Expect = 4e-42
 Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 4/119 (3%)

Query: 25  YEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFSIE-SYDLKYKPTITGVITK 83
            E+L+EYD PIG+ P     Y  D  T K +V +   C    + S  LK+  T+TG + K
Sbjct: 54  PELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEK 113

Query: 84  GKISDLSGISVKVLILWLNIVEVTRQGDELMLSVGIASADFPVSSFAERPTCGCGFDCF 142
           GK++D+ GI  KV+ +W+ +  ++    ++  + G+  +     ++      G   D F
Sbjct: 114 GKLTDVEGIKTKVM-IWVKVTSISTDASKVYFTAGMKKS-RSRDAY-GVQRNGLRVDKF 169

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	160
d1ydua1	169	Hypothetical protein At5g01610 {Thale cress (Arabi	100.0

>d1ydua1 b.162.1.1 (A:2-170) Hypothetical protein At5g01610 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: At5g01610-like
superfamily: At5g01610-like
family: At5g01610-like
domain: Hypothetical protein At5g01610
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.1e-44  Score=287.12  Aligned_cols=120  Identities=28%  Similarity=0.603  Sum_probs=112.3

Q ss_pred             CCCCccHHHHHhhCCCCCCCCCCCceeeEEecCCCeEEEEecCcEEEEEc-eEEEEEccEEEEEEecCceecccceeEEE
Q 031416           18 GDNSETAYEVLQEYDFPIGLLPKSVLGYTIDRTTGKFSVYLEDTCSFSIE-SYDLKYKPTITGVITKGKISDLSGISVKV   96 (160)
Q Consensus        18 ~~~~~tayelL~~~gLP~GLLP~~V~~y~l~~~tG~f~v~l~~~C~f~~~-~~~v~Y~~~ItG~i~~gkI~~L~GVk~K~   96 (160)
                      +.++.+.+|||++||||+||||++|++|+||++||+|||+|+++|+|+++ +|+|+|+++|||+|++|+|++|+|||+| 
T Consensus        47 gk~~k~l~ELL~eygLP~GLLP~~V~~Y~l~~~TG~f~V~l~~~C~~~f~~sy~v~Y~~~VtG~ls~Gki~~L~GVkvK-  125 (169)
T d1ydua1          47 GKMQKPLPELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKGKLTDVEGIKTK-  125 (169)
T ss_dssp             TTTTSSCHHHHHHHSCTTCTTTSSSCEEEECTTTCSEEEECSSCEEEESTTSSEEEECSEEEEEECSSCEEEEESCEEE-
T ss_pred             CCCCCCHHHHHHhcCCCCccCCCCceEEEEECCCcEEEEEeCCCEEEEecCceEEEEcCEEEEEEcCCcCccccceEEE-
Confidence            56778899999999999999999999999999999999999999999997 7999999999999999999999999999 


Q ss_pred             EEEeeeeeEEEEeCCeEEEEEceeeeeeecCcccCCCCCCCCCC
Q 031416           97 LILWLNIVEVTRQGDELMLSVGIASADFPVSSFAERPTCGCGFD  140 (160)
Q Consensus        97 lf~Wv~V~eI~~~~~~I~F~vG~~sksFP~s~F~~~P~C~~g~~  140 (160)
                      +|+|++|+||.+|+|+|+|++| ++|+||+++|+. |+|+++.+
T Consensus       126 lflWv~V~eI~vd~~kI~F~vG-I~KsfP~daFE~-prdg~~vd  167 (169)
T d1ydua1         126 VMIWVKVTSISTDASKVYFTAG-MKKSRSRDAYGV-QRNGLRVD  167 (169)
T ss_dssp             SSSEESCCCBEECSSSEECTTS-SSSCCCHHHHSS-CCCCCCTT
T ss_pred             EEEEEEEEEEEEcCCeEEEEec-ccccCCHHHccC-Cccceeec
Confidence            6799999999999999999999 789999999955 67776554